locus-tag class description VV1_RS00010 PF07683 Cobalamin synthesis protein cobW C-terminal domain VV1_RS00010 PF02492 CobW/HypB/UreG, nucleotide-binding domain VV1_RS00015 PF01979 Amidohydrolase family VV1_RS00025 PF01594 AI-2E family transporter VV1_RS00030 PF12794 Mechanosensitive ion channel inner membrane domain 1 VV1_RS00030 PF00924 Mechanosensitive ion channel VV1_RS00030 PF12795 Mechanosensitive ion channel porin domain VV1_RS00045 PF00005 ABC transporter VV1_RS00050 PF02405 Permease MlaE VV1_RS00065 PF01966 HD domain VV1_RS00065 PF13286 Phosphohydrolase-associated domain VV1_RS00085 PF13145 PPIC-type PPIASE domain VV1_RS00090 PF00216 Bacterial DNA-binding protein VV1_RS00095 PF05362 Lon protease (S16) C-terminal proteolytic domain VV1_RS00095 PF02190 ATP-dependent protease La (LON) substrate-binding domain VV1_RS00095 PF00004 ATPase family associated with various cellular activities (AAA) VV1_RS00100 PF10431 C-terminal, D2-small domain, of ClpB protein VV1_RS00100 PF06689 ClpX C4-type zinc finger VV1_RS00100 PF07724 AAA domain (Cdc48 subfamily) VV1_RS00105 PF00574 Clp protease VV1_RS00110 PF05697 Bacterial trigger factor protein (TF) VV1_RS00110 PF05698 Bacterial trigger factor protein (TF) C-terminus VV1_RS00110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV1_RS00115 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS00115 PF02743 Cache domain VV1_RS00120 PF00158 Sigma-54 interaction domain VV1_RS00120 PF00072 Response regulator receiver domain VV1_RS00120 PF02954 Bacterial regulatory protein, Fis family VV1_RS00130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV1_RS00135 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VV1_RS00140 PF03480 Bacterial extracellular solute-binding protein, family 7 VV1_RS00145 PF00005 ABC transporter VV1_RS00145 PF17912 MalK OB fold domain VV1_RS00145 PF03459 TOBE domain VV1_RS00150 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS00155 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS00160 PF01547 Bacterial extracellular solute-binding protein VV1_RS00165 PF00672 HAMP domain VV1_RS00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS00165 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS00170 PF00486 Transcriptional regulatory protein, C terminal VV1_RS00170 PF00072 Response regulator receiver domain VV1_RS00175 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VV1_RS00180 PF00672 HAMP domain VV1_RS00180 PF02743 Cache domain VV1_RS00180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS00190 PF04820 Tryptophan halogenase VV1_RS00215 PF00550 Phosphopantetheine attachment site VV1_RS00220 PF00550 Phosphopantetheine attachment site VV1_RS00230 PF13193 AMP-binding enzyme C-terminal domain VV1_RS00230 PF00501 AMP-binding enzyme VV1_RS00240 PF00535 Glycosyl transferase family 2 VV1_RS00245 PF00221 Aromatic amino acid lyase VV1_RS00270 PF00109 Beta-ketoacyl synthase, N-terminal domain VV1_RS00270 PF02801 Beta-ketoacyl synthase, C-terminal domain VV1_RS00285 PF00109 Beta-ketoacyl synthase, N-terminal domain VV1_RS00285 PF02801 Beta-ketoacyl synthase, C-terminal domain VV1_RS00300 PF10400 Virulence activator alpha C-term VV1_RS00300 PF03551 Transcriptional regulator PadR-like family VV1_RS00325 PF12961 Domain of unknown function (DUF3850) VV1_RS00360 PF02899 Phage integrase, N-terminal SAM-like domain VV1_RS00360 PF00589 Phage integrase family VV1_RS00560 PF00166 Chaperonin 10 Kd subunit VV1_RS00565 PF02899 Phage integrase, N-terminal SAM-like domain VV1_RS00565 PF00589 Phage integrase family VV1_RS00575 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS00575 PF18719 ArlS sensor domain VV1_RS00580 PF00486 Transcriptional regulatory protein, C terminal VV1_RS00580 PF00072 Response regulator receiver domain VV1_RS00590 PF07670 Nucleoside recognition VV1_RS00590 PF07662 Na+ dependent nucleoside transporter C-terminus VV1_RS00590 PF01773 Na+ dependent nucleoside transporter N-terminus VV1_RS00595 PF03466 LysR substrate binding domain VV1_RS00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS00600 PF13406 Transglycosylase SLT domain VV1_RS00605 PF05166 YcgL domain VV1_RS00610 PF05209 Septum formation inhibitor MinC, N-terminal domain VV1_RS00610 PF03775 Septum formation inhibitor MinC, C-terminal domain VV1_RS00620 PF03776 Septum formation topological specificity factor MinE VV1_RS00625 PF00570 HRDC domain VV1_RS00625 PF01612 3'-5' exonuclease VV1_RS00630 PF13193 AMP-binding enzyme C-terminal domain VV1_RS00630 PF00501 AMP-binding enzyme VV1_RS00635 PF00561 alpha/beta hydrolase fold VV1_RS00650 PF00814 Glycoprotease family VV1_RS00655 PF04851 Type III restriction enzyme, res subunit VV1_RS00655 PF13307 Helicase C-terminal domain VV1_RS00665 PF00551 Formyl transferase VV1_RS00665 PF01842 ACT domain VV1_RS00670 PF06185 YecM protein VV1_RS00675 PF03485 Arginyl tRNA synthetase N terminal domain VV1_RS00675 PF05746 DALR anticodon binding domain VV1_RS00675 PF00750 tRNA synthetases class I (R) VV1_RS00690 PF02421 Ferrous iron transport protein B VV1_RS00690 PF07664 Ferrous iron transport protein B C terminus VV1_RS00690 PF07670 Nucleoside recognition VV1_RS00695 PF04023 FeoA domain VV1_RS00705 PF01297 Zinc-uptake complex component A periplasmic VV1_RS00710 PF00005 ABC transporter VV1_RS00715 PF00950 ABC 3 transport family VV1_RS00720 PF00549 CoA-ligase VV1_RS00720 PF02629 CoA binding domain VV1_RS00725 PF08442 ATP-grasp domain VV1_RS00725 PF00549 CoA-ligase VV1_RS00730 PF02817 e3 binding domain VV1_RS00730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VV1_RS00730 PF00364 Biotin-requiring enzyme VV1_RS00735 PF00676 Dehydrogenase E1 component VV1_RS00735 PF16870 2-oxoglutarate dehydrogenase C-terminal VV1_RS00735 PF02779 Transketolase, pyrimidine binding domain VV1_RS00735 PF16078 2-oxoglutarate dehydrogenase N-terminus VV1_RS00740 PF13085 2Fe-2S iron-sulfur cluster binding domain VV1_RS00745 PF02910 Fumarate reductase flavoprotein C-term VV1_RS00745 PF00890 FAD binding domain VV1_RS00750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VV1_RS00755 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VV1_RS00760 PF00285 Citrate synthase, C-terminal domain VV1_RS00765 PF01784 NIF3 (NGG1p interacting factor 3) VV1_RS00775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV1_RS00775 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS00780 PF00375 Sodium:dicarboxylate symporter family VV1_RS00785 PF01042 Endoribonuclease L-PSP VV1_RS00790 PF08348 YheO-like PAS domain VV1_RS00790 PF13309 HTH domain VV1_RS00795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV1_RS00795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV1_RS00795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV1_RS00795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV1_RS00800 PF17206 SeqA protein N-terminal domain VV1_RS00800 PF03925 SeqA protein C-terminal domain VV1_RS00805 PF12697 Alpha/beta hydrolase family VV1_RS00815 PF00258 Flavodoxin VV1_RS00825 PF01475 Ferric uptake regulator family VV1_RS00830 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VV1_RS00830 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV1_RS00835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VV1_RS00835 PF00367 phosphotransferase system, EIIB VV1_RS00835 PF02378 Phosphotransferase system, EIIC VV1_RS00840 PF01979 Amidohydrolase family VV1_RS00845 PF00480 ROK family VV1_RS00845 PF01047 MarR family VV1_RS00850 PF02254 TrkA-N domain VV1_RS00850 PF00999 Sodium/hydrogen exchanger family VV1_RS00855 PF13537 Glutamine amidotransferase domain VV1_RS00855 PF00733 Asparagine synthase VV1_RS00865 PF00854 POT family VV1_RS00870 PF17200 Single Cache domain 2 VV1_RS00870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS00870 PF00672 HAMP domain VV1_RS00875 PF00762 Ferrochelatase VV1_RS00880 PF05191 Adenylate kinase, active site lid VV1_RS00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS00885 PF00183 Hsp90 protein VV1_RS00890 PF00486 Transcriptional regulatory protein, C terminal VV1_RS00895 PF17323 Trans-membrane regulatory protein ToxS VV1_RS00910 PF12850 Calcineurin-like phosphoesterase superfamily domain VV1_RS00925 PF07556 Protein of unknown function (DUF1538) VV1_RS00930 PF07556 Protein of unknown function (DUF1538) VV1_RS00935 PF01370 NAD dependent epimerase/dehydratase family VV1_RS00935 PF08338 Domain of unknown function (DUF1731) VV1_RS00940 PF00106 short chain dehydrogenase VV1_RS00945 PF00085 Thioredoxin VV1_RS00950 PF16200 C-terminal region of band_7 VV1_RS00950 PF01145 SPFH domain / Band 7 family VV1_RS00970 PF03120 NAD-dependent DNA ligase OB-fold domain VV1_RS00970 PF00533 BRCA1 C Terminus (BRCT) domain VV1_RS00970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VV1_RS00970 PF12826 Helix-hairpin-helix motif VV1_RS00970 PF01653 NAD-dependent DNA ligase adenylation domain VV1_RS00975 PF04354 ZipA, C-terminal FtsZ-binding domain VV1_RS00985 PF00291 Pyridoxal-phosphate dependent enzyme VV1_RS00990 PF00381 PTS HPr component phosphorylation site VV1_RS00995 PF02896 PEP-utilising enzyme, TIM barrel domain VV1_RS00995 PF05524 PEP-utilising enzyme, N-terminal VV1_RS00995 PF00391 PEP-utilising enzyme, mobile domain VV1_RS01000 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VV1_RS01005 PF00669 Bacterial flagellin N-terminal helical region VV1_RS01005 PF07196 Flagellin hook IN motif VV1_RS01005 PF00700 Bacterial flagellin C-terminal helical region VV1_RS01010 PF00669 Bacterial flagellin N-terminal helical region VV1_RS01010 PF07196 Flagellin hook IN motif VV1_RS01010 PF00700 Bacterial flagellin C-terminal helical region VV1_RS01020 PF00669 Bacterial flagellin N-terminal helical region VV1_RS01020 PF00700 Bacterial flagellin C-terminal helical region VV1_RS01020 PF07196 Flagellin hook IN motif VV1_RS01025 PF00669 Bacterial flagellin N-terminal helical region VV1_RS01030 PF07196 Flagellin hook IN motif VV1_RS01030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV1_RS01035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VV1_RS01035 PF10135 Rod binding protein VV1_RS01040 PF02119 Flagellar P-ring protein VV1_RS01045 PF02107 Flagellar L-ring protein VV1_RS01050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV1_RS01050 PF00460 Flagella basal body rod protein VV1_RS01055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV1_RS01055 PF00460 Flagella basal body rod protein VV1_RS01060 PF00460 Flagella basal body rod protein VV1_RS01060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV1_RS01060 PF07559 Flagellar basal body protein FlaE VV1_RS01065 PF13860 FlgD Ig-like domain VV1_RS01065 PF03963 Flagellar hook capping protein - N-terminal region VV1_RS01065 PF13861 FlgD Tudor-like domain VV1_RS01070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV1_RS01070 PF00460 Flagella basal body rod protein VV1_RS01075 PF00460 Flagella basal body rod protein VV1_RS01080 PF03705 CheR methyltransferase, all-alpha domain VV1_RS01080 PF01739 CheR methyltransferase, SAM binding domain VV1_RS01085 PF01584 CheW-like domain VV1_RS01085 PF00072 Response regulator receiver domain VV1_RS01130 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV1_RS01135 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV1_RS01140 PF13609 Gram-negative porin VV1_RS01145 PF00403 Heavy-metal-associated domain VV1_RS01155 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VV1_RS01155 PF03173 Putative carbohydrate binding domain VV1_RS01155 PF02838 Glycosyl hydrolase family 20, domain 2 VV1_RS01155 PF00728 Glycosyl hydrolase family 20, catalytic domain VV1_RS01160 PF01963 TraB family VV1_RS01175 PF01713 Smr domain VV1_RS01180 PF00849 RNA pseudouridylate synthase VV1_RS01180 PF01479 S4 domain VV1_RS01185 PF04073 Aminoacyl-tRNA editing domain VV1_RS01190 PF00149 Calcineurin-like phosphoesterase VV1_RS01190 PF02872 5'-nucleotidase, C-terminal domain VV1_RS01195 PF00793 DAHP synthetase I family VV1_RS01200 PF13369 Transglutaminase-like superfamily VV1_RS01205 PF04247 Invasion gene expression up-regulator, SirB VV1_RS01210 PF13847 Methyltransferase domain VV1_RS01210 PF17827 PrmC N-terminal domain VV1_RS01215 PF00472 RF-1 domain VV1_RS01215 PF03462 PCRF domain VV1_RS01220 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VV1_RS01220 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VV1_RS01220 PF01488 Shikimate / quinate 5-dehydrogenase VV1_RS01225 PF03550 Outer membrane lipoprotein LolB VV1_RS01230 PF08544 GHMP kinases C terminal VV1_RS01230 PF00288 GHMP kinases N terminal domain VV1_RS01235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VV1_RS01235 PF14572 Phosphoribosyl synthetase-associated domain VV1_RS01240 PF01195 Peptidyl-tRNA hydrolase VV1_RS01245 PF01926 50S ribosome-binding GTPase VV1_RS01245 PF06071 Protein of unknown function (DUF933) VV1_RS01325 PF01494 FAD binding domain VV1_RS01330 PF01938 TRAM domain VV1_RS01330 PF04055 Radical SAM superfamily VV1_RS01330 PF00919 Uncharacterized protein family UPF0004 VV1_RS01335 PF02562 PhoH-like protein VV1_RS01340 PF02130 Uncharacterized protein family UPF0054 VV1_RS01345 PF00571 CBS domain VV1_RS01345 PF03471 Transporter associated domain VV1_RS01350 PF00795 Carbon-nitrogen hydrolase VV1_RS01355 PF07295 Zinc-ribbon containing domain VV1_RS01360 PF13603 Leucyl-tRNA synthetase, Domain 2 VV1_RS01360 PF08264 Anticodon-binding domain of tRNA VV1_RS01360 PF00133 tRNA synthetases class I (I, L, M and V) VV1_RS01365 PF04390 Lipopolysaccharide-assembly VV1_RS01370 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VV1_RS01370 PF06144 DNA polymerase III, delta subunit VV1_RS01380 PF02590 Predicted SPOUT methyltransferase VV1_RS01385 PF03717 Penicillin-binding Protein dimerisation domain VV1_RS01385 PF00905 Penicillin binding protein transpeptidase domain VV1_RS01390 PF01098 Cell cycle protein VV1_RS01395 PF03330 Lytic transglycolase VV1_RS01395 PF05036 Sporulation related domain VV1_RS01400 PF07943 Penicillin-binding protein 5, C-terminal domain VV1_RS01400 PF00768 D-alanyl-D-alanine carboxypeptidase VV1_RS01405 PF04359 Protein of unknown function (DUF493) VV1_RS01410 PF03099 Biotin/lipoate A/B protein ligase family VV1_RS01415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VV1_RS01415 PF04055 Radical SAM superfamily VV1_RS01425 PF00464 Serine hydroxymethyltransferase VV1_RS01435 PF00128 Alpha amylase, catalytic domain VV1_RS01435 PF16657 Maltogenic Amylase, C-terminal domain VV1_RS01440 PF00367 phosphotransferase system, EIIB VV1_RS01440 PF02378 Phosphotransferase system, EIIC VV1_RS01445 PF00356 Bacterial regulatory proteins, lacI family VV1_RS01455 PF00005 ABC transporter VV1_RS01455 PF09383 NIL domain VV1_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS01465 PF03180 NLPA lipoprotein VV1_RS01470 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VV1_RS01475 PF07348 Syd protein (SUKH-2) VV1_RS01480 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VV1_RS01480 PF14489 QueF-like protein VV1_RS01490 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS01495 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VV1_RS01495 PF11892 Domain of unknown function (DUF3412) VV1_RS01495 PF03641 Possible lysine decarboxylase VV1_RS01500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VV1_RS01500 PF01367 5'-3' exonuclease, C-terminal SAM fold VV1_RS01505 PF01223 DNA/RNA non-specific endonuclease VV1_RS01510 PF18125 RlmM ferredoxin-like domain VV1_RS01510 PF01728 FtsJ-like methyltransferase VV1_RS01515 PF04241 Protein of unknown function (DUF423) VV1_RS01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS01525 PF03466 LysR substrate binding domain VV1_RS01530 PF02568 Thiamine biosynthesis protein (ThiI) VV1_RS01530 PF02926 THUMP domain VV1_RS01535 PF00691 OmpA family VV1_RS01535 PF13677 Membrane MotB of proton-channel complex MotA/MotB VV1_RS01540 PF01618 MotA/TolQ/ExbB proton channel family VV1_RS01545 PF02609 Exonuclease VII small subunit VV1_RS01550 PF00348 Polyprenyl synthetase VV1_RS01555 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VV1_RS01555 PF02779 Transketolase, pyrimidine binding domain VV1_RS01555 PF02780 Transketolase, C-terminal domain VV1_RS01560 PF04608 Phosphatidylglycerophosphatase A VV1_RS01565 PF00586 AIR synthase related protein, N-terminal domain VV1_RS01565 PF02769 AIR synthase related protein, C-terminal domain VV1_RS01570 PF01029 NusB family VV1_RS01575 PF00885 6,7-dimethyl-8-ribityllumazine synthase VV1_RS01580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VV1_RS01580 PF00925 GTP cyclohydrolase II VV1_RS01585 PF00677 Lumazine binding domain VV1_RS01590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV1_RS01590 PF01872 RibD C-terminal domain VV1_RS01595 PF03477 ATP cone domain VV1_RS01600 PF00171 Aldehyde dehydrogenase family VV1_RS01610 PF07417 Sigma factor-binding transcriptional regulator Crl VV1_RS01615 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VV1_RS01620 PF00156 Phosphoribosyl transferase domain VV1_RS01625 PF00860 Permease family VV1_RS01630 PF01546 Peptidase family M20/M25/M40 VV1_RS01630 PF07687 Peptidase dimerisation domain VV1_RS01655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VV1_RS01655 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VV1_RS01655 PF02769 AIR synthase related protein, C-terminal domain VV1_RS01660 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV1_RS01660 PF01464 Transglycosylase SLT domain VV1_RS01665 PF14437 MafB19-like deaminase VV1_RS01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS01670 PF03466 LysR substrate binding domain VV1_RS01675 PF08240 Alcohol dehydrogenase GroES-like domain VV1_RS01675 PF00107 Zinc-binding dehydrogenase VV1_RS01680 PF00756 Putative esterase VV1_RS01685 PF03806 AbgT putative transporter family VV1_RS01705 PF07963 Prokaryotic N-terminal methylation motif VV1_RS01705 PF00114 Pilin (bacterial filament) VV1_RS01710 PF07963 Prokaryotic N-terminal methylation motif VV1_RS01710 PF00114 Pilin (bacterial filament) VV1_RS01715 PF00226 DnaJ domain VV1_RS01715 PF00684 DnaJ central domain VV1_RS01715 PF01556 DnaJ C terminal domain VV1_RS01720 PF00012 Hsp70 protein VV1_RS01745 PF00375 Sodium:dicarboxylate symporter family VV1_RS01750 PF01025 GrpE VV1_RS01755 PF01513 ATP-NAD kinase VV1_RS01760 PF02463 RecF/RecN/SMC N terminal domain VV1_RS01765 PF04355 SmpA / OmlA family VV1_RS01770 PF03658 RnfH family Ubiquitin VV1_RS01775 PF03364 Polyketide cyclase / dehydrase and lipid transport VV1_RS01780 PF01668 SmpB protein VV1_RS01785 PF00589 Phage integrase family VV1_RS01785 PF14659 Phage integrase, N-terminal SAM-like domain VV1_RS01785 PF13356 Arm DNA-binding domain VV1_RS01835 PF02463 RecF/RecN/SMC N terminal domain VV1_RS01845 PF00665 Integrase core domain VV1_RS01865 PF00717 Peptidase S24-like VV1_RS01870 PF11799 impB/mucB/samB family C-terminal domain VV1_RS01870 PF13438 Domain of unknown function (DUF4113) VV1_RS01870 PF00817 impB/mucB/samB family VV1_RS01895 PF00400 WD domain, G-beta repeat VV1_RS01995 PF03481 Putative GTP-binding controlling metal-binding VV1_RS01995 PF01300 Telomere recombination VV1_RS02005 PF02028 BCCT, betaine/carnitine/choline family transporter VV1_RS02010 PF07885 Ion channel VV1_RS02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS02015 PF03466 LysR substrate binding domain VV1_RS02020 PF01266 FAD dependent oxidoreductase VV1_RS02025 PF01235 Sodium:alanine symporter family VV1_RS02030 PF01184 GPR1/FUN34/yaaH family VV1_RS02035 PF00704 Glycosyl hydrolases family 18 VV1_RS02035 PF06483 Chitinase C VV1_RS02040 PF00117 Glutamine amidotransferase class-I VV1_RS02040 PF02540 NAD synthase VV1_RS02040 PF00958 GMP synthase C terminal domain VV1_RS02045 PF00571 CBS domain VV1_RS02045 PF00478 IMP dehydrogenase / GMP reductase domain VV1_RS02050 PF13742 OB-fold nucleic acid binding domain VV1_RS02050 PF02601 Exonuclease VII, large subunit VV1_RS02060 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS02060 PF13185 GAF domain VV1_RS02070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VV1_RS02070 PF01926 50S ribosome-binding GTPase VV1_RS02075 PF13360 PQQ-like domain VV1_RS02080 PF09976 Tetratricopeptide repeat-like domain VV1_RS02085 PF13393 Histidyl-tRNA synthetase VV1_RS02085 PF03129 Anticodon binding domain VV1_RS02090 PF04551 GcpE protein VV1_RS02095 PF13464 Domain of unknown function (DUF4115) VV1_RS02100 PF04055 Radical SAM superfamily VV1_RS02105 PF00334 Nucleoside diphosphate kinase VV1_RS02110 PF12404 Peptidase VV1_RS02110 PF00883 Cytosol aminopeptidase family, catalytic domain VV1_RS02115 PF04384 Iron-sulphur cluster assembly VV1_RS02120 PF00111 2Fe-2S iron-sulfur cluster binding domain VV1_RS02125 PF00012 Hsp70 protein VV1_RS02130 PF07743 HSCB C-terminal oligomerisation domain VV1_RS02130 PF00226 DnaJ domain VV1_RS02135 PF01521 Iron-sulphur cluster biosynthesis VV1_RS02140 PF01592 NifU-like N terminal domain VV1_RS02145 PF00266 Aminotransferase class-V VV1_RS02150 PF02082 Transcriptional regulator VV1_RS02155 PF00588 SpoU rRNA Methylase family VV1_RS02160 PF00459 Inositol monophosphatase family VV1_RS02165 PF07549 SecD/SecF GG Motif VV1_RS02165 PF02355 Protein export membrane protein VV1_RS02170 PF02355 Protein export membrane protein VV1_RS02170 PF07549 SecD/SecF GG Motif VV1_RS02170 PF13721 SecD export protein N-terminal TM region VV1_RS02175 PF02699 Preprotein translocase subunit VV1_RS02180 PF01702 Queuine tRNA-ribosyltransferase VV1_RS02185 PF02547 Queuosine biosynthesis protein VV1_RS02195 PF00571 CBS domain VV1_RS02200 PF00463 Isocitrate lyase family VV1_RS02205 PF01274 Malate synthase VV1_RS02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS02210 PF03466 LysR substrate binding domain VV1_RS02215 PF00578 AhpC/TSA family VV1_RS02215 PF10417 C-terminal domain of 1-Cys peroxiredoxin VV1_RS02220 PF03932 CutC family VV1_RS02225 PF03976 Polyphosphate kinase 2 (PPK2) VV1_RS02230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS02230 PF03466 LysR substrate binding domain VV1_RS02250 PF01895 PhoU domain VV1_RS02255 PF00005 ABC transporter VV1_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS02265 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS02270 PF17941 Polyphosphate kinase C-terminal domain 1 VV1_RS02270 PF13089 Polyphosphate kinase N-terminal domain VV1_RS02270 PF02503 Polyphosphate kinase middle domain VV1_RS02270 PF13090 Polyphosphate kinase C-terminal domain 2 VV1_RS02275 PF02541 Ppx/GppA phosphatase family VV1_RS02280 PF12849 PBP superfamily domain VV1_RS02285 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS02285 PF00989 PAS fold VV1_RS02285 PF11808 Phosphate regulon sensor protein PhoR VV1_RS02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS02290 PF00072 Response regulator receiver domain VV1_RS02290 PF00486 Transcriptional regulatory protein, C terminal VV1_RS02295 PF04381 Putative exonuclease, RdgC VV1_RS02300 PF16325 Peptidase family U32 C-terminal domain VV1_RS02300 PF01136 Peptidase family U32 VV1_RS02305 PF00037 4Fe-4S binding domain VV1_RS02310 PF03411 Penicillin-insensitive murein endopeptidase VV1_RS02345 PF17871 AAA lid domain VV1_RS02345 PF02861 Clp amino terminal domain, pathogenicity island component VV1_RS02345 PF07724 AAA domain (Cdc48 subfamily) VV1_RS02345 PF00004 ATPase family associated with various cellular activities (AAA) VV1_RS02345 PF10431 C-terminal, D2-small domain, of ClpB protein VV1_RS02350 PF02578 Multi-copper polyphenol oxidoreductase laccase VV1_RS02355 PF01479 S4 domain VV1_RS02355 PF00849 RNA pseudouridylate synthase VV1_RS02360 PF13525 Outer membrane lipoprotein VV1_RS02365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VV1_RS02370 PF00800 Prephenate dehydratase VV1_RS02370 PF01817 Chorismate mutase type II VV1_RS02375 PF01931 Protein of unknown function DUF84 VV1_RS02380 PF01371 Trp repressor protein VV1_RS02385 PF01464 Transglycosylase SLT domain VV1_RS02385 PF14718 Soluble lytic murein transglycosylase L domain VV1_RS02390 PF00005 ABC transporter VV1_RS02390 PF12848 ABC transporter VV1_RS02395 PF07238 PilZ domain VV1_RS02400 PF01551 Peptidase family M23 VV1_RS02400 PF04225 Opacity-associated protein A LysM-like domain VV1_RS02405 PF02153 Prephenate dehydrogenase VV1_RS02405 PF01817 Chorismate mutase type II VV1_RS02410 PF00793 DAHP synthetase I family VV1_RS02415 PF00933 Glycosyl hydrolase family 3 N terminal domain VV1_RS02420 PF03702 Anhydro-N-acetylmuramic acid kinase VV1_RS02440 PF02554 Carbon starvation protein CstA VV1_RS02445 PF06580 Histidine kinase VV1_RS02445 PF07694 5TMR of 5TMR-LYT VV1_RS02450 PF00072 Response regulator receiver domain VV1_RS02450 PF04397 LytTr DNA-binding domain VV1_RS02455 PF02401 LytB protein VV1_RS02460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV1_RS02465 PF01252 Signal peptidase (SPase) II VV1_RS02470 PF08264 Anticodon-binding domain of tRNA VV1_RS02470 PF00133 tRNA synthetases class I (I, L, M and V) VV1_RS02470 PF06827 Zinc finger found in FPG and IleRS VV1_RS02475 PF06574 FAD synthetase VV1_RS02475 PF01687 Riboflavin kinase VV1_RS02480 PF03023 Lipid II flippase MurJ VV1_RS02485 PF01649 Ribosomal protein S20 VV1_RS02490 PF01022 Bacterial regulatory protein, arsR family VV1_RS02495 PF03466 LysR substrate binding domain VV1_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS02500 PF02690 Na+/Pi-cotransporter VV1_RS02510 PF00303 Thymidylate synthase VV1_RS02515 PF01790 Prolipoprotein diacylglyceryl transferase VV1_RS02520 PF01925 Sulfite exporter TauE/SafE VV1_RS02525 PF01590 GAF domain VV1_RS02525 PF05524 PEP-utilising enzyme, N-terminal VV1_RS02525 PF02896 PEP-utilising enzyme, TIM barrel domain VV1_RS02525 PF00391 PEP-utilising enzyme, mobile domain VV1_RS02530 PF00293 NUDIX domain VV1_RS02535 PF02976 DNA mismatch repair enzyme MutH VV1_RS02545 PF00248 Aldo/keto reductase family VV1_RS02555 PF00158 Sigma-54 interaction domain VV1_RS02555 PF02954 Bacterial regulatory protein, Fis family VV1_RS02555 PF02830 V4R domain VV1_RS02555 PF06505 Activator of aromatic catabolism VV1_RS02560 PF00152 tRNA synthetases class II (D, K and N) VV1_RS02560 PF01336 OB-fold nucleic acid binding domain VV1_RS02565 PF03462 PCRF domain VV1_RS02565 PF00472 RF-1 domain VV1_RS02570 PF02272 DHHA1 domain VV1_RS02570 PF01368 DHH family VV1_RS02570 PF17768 RecJ OB domain VV1_RS02575 PF10411 Disulfide bond isomerase protein N-terminus VV1_RS02575 PF13098 Thioredoxin-like domain VV1_RS02580 PF02899 Phage integrase, N-terminal SAM-like domain VV1_RS02580 PF00589 Phage integrase family VV1_RS02585 PF00258 Flavodoxin VV1_RS02590 PF05525 Branched-chain amino acid transport protein VV1_RS02595 PF05175 Methyltransferase small domain VV1_RS02600 PF00271 Helicase conserved C-terminal domain VV1_RS02600 PF00270 DEAD/DEAH box helicase VV1_RS02605 PF03883 Peroxide stress protein YaaA VV1_RS02610 PF01235 Sodium:alanine symporter family VV1_RS02625 PF03167 Uracil DNA glycosylase superfamily VV1_RS02630 PF01261 Xylose isomerase-like TIM barrel VV1_RS02635 PF01228 Glycine radical VV1_RS02640 PF00291 Pyridoxal-phosphate dependent enzyme VV1_RS02640 PF14821 Threonine synthase N terminus VV1_RS02645 PF00288 GHMP kinases N terminal domain VV1_RS02645 PF08544 GHMP kinases C terminal VV1_RS02650 PF01842 ACT domain VV1_RS02650 PF00696 Amino acid kinase family VV1_RS02650 PF13840 ACT domain VV1_RS02650 PF03447 Homoserine dehydrogenase, NAD binding domain VV1_RS02650 PF00742 Homoserine dehydrogenase VV1_RS02660 PF03737 Aldolase/RraA VV1_RS02670 PF00072 Response regulator receiver domain VV1_RS02670 PF00486 Transcriptional regulatory protein, C terminal VV1_RS02680 PF00989 PAS fold VV1_RS02680 PF01627 Hpt domain VV1_RS02680 PF18415 Histidine kinase receptor ArcB trans-membrane domain VV1_RS02680 PF00072 Response regulator receiver domain VV1_RS02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS02680 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS02685 PF01590 GAF domain VV1_RS02685 PF00563 EAL domain VV1_RS02685 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS02685 PF00360 Phytochrome region VV1_RS02690 PF04055 Radical SAM superfamily VV1_RS02690 PF16199 Radical_SAM C-terminal domain VV1_RS02695 PF04898 Glutamate synthase central domain VV1_RS02695 PF00310 Glutamine amidotransferases class-II VV1_RS02695 PF01645 Conserved region in glutamate synthase VV1_RS02695 PF01493 GXGXG motif VV1_RS02700 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS02700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VV1_RS02705 PF01493 GXGXG motif VV1_RS02705 PF01645 Conserved region in glutamate synthase VV1_RS02705 PF04898 Glutamate synthase central domain VV1_RS02705 PF00310 Glutamine amidotransferases class-II VV1_RS02710 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS02710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VV1_RS02720 PF01048 Phosphorylase superfamily VV1_RS02725 PF03186 CobD/Cbib protein VV1_RS02725 PF17113 Regulatory signalling modulator protein AmpE VV1_RS02730 PF01497 Periplasmic binding protein VV1_RS02735 PF03458 UPF0126 domain VV1_RS02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS02740 PF03466 LysR substrate binding domain VV1_RS02745 PF01925 Sulfite exporter TauE/SafE VV1_RS02755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VV1_RS02755 PF02142 MGS-like domain VV1_RS02755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VV1_RS02760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VV1_RS02760 PF00117 Glutamine amidotransferase class-I VV1_RS02765 PF05173 Dihydrodipicolinate reductase, C-terminus VV1_RS02765 PF01113 Dihydrodipicolinate reductase, N-terminus VV1_RS02770 PF00293 NUDIX domain VV1_RS02775 PF02810 SEC-C motif VV1_RS02775 PF07517 SecA DEAD-like domain VV1_RS02775 PF01043 SecA preprotein cross-linking domain VV1_RS02775 PF07516 SecA Wing and Scaffold domain VV1_RS02785 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VV1_RS02790 PF12327 FtsZ family, C-terminal domain VV1_RS02790 PF00091 Tubulin/FtsZ family, GTPase domain VV1_RS02795 PF02491 SHS2 domain inserted in FTSA VV1_RS02800 PF08478 POTRA domain, FtsQ-type VV1_RS02800 PF03799 Cell division protein FtsQ VV1_RS02805 PF01225 Mur ligase family, catalytic domain VV1_RS02805 PF02875 Mur ligase family, glutamate ligase domain VV1_RS02805 PF08245 Mur ligase middle domain VV1_RS02810 PF03033 Glycosyltransferase family 28 N-terminal domain VV1_RS02810 PF04101 Glycosyltransferase family 28 C-terminal domain VV1_RS02815 PF01098 Cell cycle protein VV1_RS02820 PF08245 Mur ligase middle domain VV1_RS02820 PF02875 Mur ligase family, glutamate ligase domain VV1_RS02825 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VV1_RS02825 PF00953 Glycosyl transferase family 4 VV1_RS02830 PF08245 Mur ligase middle domain VV1_RS02830 PF02875 Mur ligase family, glutamate ligase domain VV1_RS02830 PF01225 Mur ligase family, catalytic domain VV1_RS02835 PF02875 Mur ligase family, glutamate ligase domain VV1_RS02835 PF08245 Mur ligase middle domain VV1_RS02835 PF01225 Mur ligase family, catalytic domain VV1_RS02840 PF00905 Penicillin binding protein transpeptidase domain VV1_RS02840 PF03717 Penicillin-binding Protein dimerisation domain VV1_RS02845 PF04999 Cell division protein FtsL VV1_RS02850 PF01795 MraW methylase family VV1_RS02855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV1_RS02860 PF04348 LppC putative lipoprotein VV1_RS02865 PF02021 Uncharacterised protein family UPF0102 VV1_RS02870 PF13580 SIS domain VV1_RS02875 PF04972 BON domain VV1_RS02880 PF04386 Stringent starvation protein B VV1_RS02885 PF02798 Glutathione S-transferase, N-terminal domain VV1_RS02885 PF00043 Glutathione S-transferase, C-terminal domain VV1_RS02890 PF02167 Cytochrome C1 family VV1_RS02895 PF00032 Cytochrome b(C-terminal)/b6/petD VV1_RS02895 PF00033 Cytochrome b/b6/petB VV1_RS02900 PF00355 Rieske [2Fe-2S] domain VV1_RS02900 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VV1_RS02905 PF00380 Ribosomal protein S9/S16 VV1_RS02910 PF00572 Ribosomal protein L13 VV1_RS02915 PF03969 AFG1-like ATPase VV1_RS02920 PF06295 Protein of unknown function (DUF1043) VV1_RS02925 PF00595 PDZ domain VV1_RS02930 PF13180 PDZ domain VV1_RS02935 PF03989 DNA gyrase C-terminal domain, beta-propeller VV1_RS02935 PF00521 DNA gyrase/topoisomerase IV, subunit A VV1_RS02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS02940 PF00986 DNA gyrase B subunit, carboxyl terminus VV1_RS02940 PF00204 DNA gyrase B VV1_RS02940 PF01751 Toprim domain VV1_RS02945 PF05728 Uncharacterised protein family (UPF0227) VV1_RS02950 PF00149 Calcineurin-like phosphoesterase VV1_RS02955 PF06853 Protein of unknown function (DUF1249) VV1_RS02960 PF00293 NUDIX domain VV1_RS02965 PF02321 Outer membrane efflux protein VV1_RS02970 PF00294 pfkB family carbohydrate kinase VV1_RS02970 PF01467 Cytidylyltransferase-like VV1_RS02975 PF08335 GlnD PII-uridylyltransferase VV1_RS02975 PF03710 Glutamate-ammonia ligase adenylyltransferase VV1_RS02980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS02980 PF00672 HAMP domain VV1_RS02980 PF12729 Four helix bundle sensory module for signal transduction VV1_RS02985 PF07885 Ion channel VV1_RS02990 PF01928 CYTH domain VV1_RS02995 PF01865 Protein of unknown function DUF47 VV1_RS03000 PF01384 Phosphate transporter family VV1_RS03005 PF08239 Bacterial SH3 domain VV1_RS03010 PF01471 Putative peptidoglycan binding domain VV1_RS03010 PF13401 AAA domain VV1_RS03015 PF01743 Poly A polymerase head domain VV1_RS03015 PF12627 Probable RNA and SrmB- binding site of polymerase A VV1_RS03015 PF01966 HD domain VV1_RS03020 PF02673 Bacitracin resistance protein BacA VV1_RS03025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VV1_RS03030 PF02152 Dihydroneopterin aldolase VV1_RS03035 PF02660 Glycerol-3-phosphate acyltransferase VV1_RS03040 PF12697 Alpha/beta hydrolase family VV1_RS03045 PF00814 Glycoprotease family VV1_RS03050 PF01165 Ribosomal protein S21 VV1_RS03055 PF09424 Yqey-like protein VV1_RS03060 PF10410 DnaB-helicase binding domain of primase VV1_RS03060 PF08278 DNA primase DnaG DnaB-binding VV1_RS03060 PF08275 DNA primase catalytic core, N-terminal domain VV1_RS03060 PF01807 CHC2 zinc finger VV1_RS03065 PF04546 Sigma-70, non-essential region VV1_RS03065 PF03979 Sigma-70 factor, region 1.1 VV1_RS03065 PF00140 Sigma-70 factor, region 1.2 VV1_RS03065 PF04542 Sigma-70 region 2 VV1_RS03065 PF04539 Sigma-70 region 3 VV1_RS03065 PF04545 Sigma-70, region 4 VV1_RS03085 PF03480 Bacterial extracellular solute-binding protein, family 7 VV1_RS03090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV1_RS03090 PF02378 Phosphotransferase system, EIIC VV1_RS03090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV1_RS03095 PF01232 Mannitol dehydrogenase Rossmann domain VV1_RS03095 PF08125 Mannitol dehydrogenase C-terminal domain VV1_RS03100 PF05068 Mannitol repressor VV1_RS03105 PF01380 SIS domain VV1_RS03110 PF08220 DeoR-like helix-turn-helix domain VV1_RS03110 PF00455 DeoR C terminal sensor domain VV1_RS03115 PF00224 Pyruvate kinase, barrel domain VV1_RS03115 PF02887 Pyruvate kinase, alpha/beta domain VV1_RS03130 PF07694 5TMR of 5TMR-LYT VV1_RS03130 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS03135 PF10369 Small subunit of acetolactate synthase VV1_RS03140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV1_RS03140 PF00205 Thiamine pyrophosphate enzyme, central domain VV1_RS03140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV1_RS03145 PF00501 AMP-binding enzyme VV1_RS03150 PF03466 LysR substrate binding domain VV1_RS03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS03160 PF01569 PAP2 superfamily VV1_RS03170 PF00682 HMGL-like VV1_RS03170 PF08502 LeuA allosteric (dimerisation) domain VV1_RS03175 PF00180 Isocitrate/isopropylmalate dehydrogenase VV1_RS03180 PF00330 Aconitase family (aconitate hydratase) VV1_RS03185 PF00694 Aconitase C-terminal domain VV1_RS03195 PF05099 Tellurite resistance protein TerB VV1_RS03195 PF00226 DnaJ domain VV1_RS03200 PF04453 LPS transport system D VV1_RS03200 PF03968 OstA-like protein VV1_RS03205 PF09312 SurA N-terminal domain VV1_RS03205 PF00639 PPIC-type PPIASE domain VV1_RS03210 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VV1_RS03215 PF00398 Ribosomal RNA adenine dimethylase VV1_RS03220 PF04379 ApaG domain VV1_RS03225 PF00149 Calcineurin-like phosphoesterase VV1_RS03230 PF00186 Dihydrofolate reductase VV1_RS03235 PF12821 Threonine/Serine exporter, ThrE VV1_RS03245 PF01018 GTP1/OBG VV1_RS03245 PF01926 50S ribosome-binding GTPase VV1_RS03250 PF01016 Ribosomal L27 protein VV1_RS03255 PF00829 Ribosomal prokaryotic L21 protein VV1_RS03260 PF00348 Polyprenyl synthetase VV1_RS03265 PF00056 lactate/malate dehydrogenase, NAD binding domain VV1_RS03265 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VV1_RS03270 PF01316 Arginine repressor, DNA binding domain VV1_RS03270 PF02863 Arginine repressor, C-terminal domain VV1_RS03275 PF16868 NMT1-like family VV1_RS03285 PF00582 Universal stress protein family VV1_RS03290 PF01553 Acyltransferase VV1_RS03295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VV1_RS03300 PF01722 BolA-like protein VV1_RS03310 PF05494 MlaC protein VV1_RS03315 PF02470 MlaD protein VV1_RS03320 PF02405 Permease MlaE VV1_RS03325 PF00005 ABC transporter VV1_RS03330 PF01699 Sodium/calcium exchanger protein VV1_RS03335 PF01380 SIS domain VV1_RS03335 PF00571 CBS domain VV1_RS03350 PF03968 OstA-like protein VV1_RS03355 PF12399 Branched-chain amino acid ATP-binding cassette transporter VV1_RS03355 PF00005 ABC transporter VV1_RS03360 PF04963 Sigma-54 factor, core binding domain VV1_RS03360 PF00309 Sigma-54 factor, Activator interacting domain (AID) VV1_RS03360 PF04552 Sigma-54, DNA binding domain VV1_RS03365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VV1_RS03370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV1_RS03375 PF03668 P-loop ATPase protein family VV1_RS03380 PF00381 PTS HPr component phosphorylation site VV1_RS03385 PF03448 MgtE intracellular N domain VV1_RS03385 PF00571 CBS domain VV1_RS03385 PF01769 Divalent cation transporter VV1_RS03390 PF01523 Putative modulator of DNA gyrase VV1_RS03395 PF04751 Protein of unknown function (DUF615) VV1_RS03400 PF00005 ABC transporter VV1_RS03405 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS03415 PF02441 Flavoprotein VV1_RS03420 PF01225 Mur ligase family, catalytic domain VV1_RS03420 PF02875 Mur ligase family, glutamate ligase domain VV1_RS03420 PF08245 Mur ligase middle domain VV1_RS03425 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VV1_RS03430 PF00719 Inorganic pyrophosphatase VV1_RS03440 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VV1_RS03445 PF04357 TamB, inner membrane protein subunit of TAM complex VV1_RS03450 PF01103 Surface antigen VV1_RS03450 PF07244 Surface antigen variable number repeat VV1_RS03450 PF17243 POTRA domain TamA domain 1 VV1_RS03455 PF01625 Peptide methionine sulfoxide reductase VV1_RS03465 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VV1_RS03480 PF12704 MacB-like periplasmic core domain VV1_RS03480 PF02687 FtsX-like permease family VV1_RS03480 PF00005 ABC transporter VV1_RS03505 PF02080 TrkA-C domain VV1_RS03505 PF03600 Citrate transporter VV1_RS03510 PF00009 Elongation factor Tu GTP binding domain VV1_RS03515 PF01507 Phosphoadenosine phosphosulfate reductase family VV1_RS03520 PF14824 Sirohaem biosynthesis protein central VV1_RS03520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV1_RS03520 PF10414 Sirohaem synthase dimerisation region VV1_RS03525 PF02872 5'-nucleotidase, C-terminal domain VV1_RS03525 PF00149 Calcineurin-like phosphoesterase VV1_RS03535 PF13673 Acetyltransferase (GNAT) domain VV1_RS03545 PF08525 Opacity-associated protein A N-terminal motif VV1_RS03545 PF04225 Opacity-associated protein A LysM-like domain VV1_RS03550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV1_RS03550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VV1_RS03560 PF01196 Ribosomal protein L17 VV1_RS03565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VV1_RS03565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VV1_RS03565 PF01000 RNA polymerase Rpb3/RpoA insert domain VV1_RS03570 PF01479 S4 domain VV1_RS03570 PF00163 Ribosomal protein S4/S9 N-terminal domain VV1_RS03575 PF00411 Ribosomal protein S11 VV1_RS03580 PF00416 Ribosomal protein S13/S18 VV1_RS03585 PF00444 Ribosomal protein L36 VV1_RS03590 PF00344 SecY translocase VV1_RS03595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VV1_RS03600 PF00327 Ribosomal protein L30p/L7e VV1_RS03605 PF03719 Ribosomal protein S5, C-terminal domain VV1_RS03605 PF00333 Ribosomal protein S5, N-terminal domain VV1_RS03610 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VV1_RS03615 PF00347 Ribosomal protein L6 VV1_RS03620 PF00410 Ribosomal protein S8 VV1_RS03625 PF00253 Ribosomal protein S14p/S29e VV1_RS03630 PF00281 Ribosomal protein L5 VV1_RS03630 PF00673 ribosomal L5P family C-terminus VV1_RS03635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VV1_RS03635 PF00467 KOW motif VV1_RS03640 PF00238 Ribosomal protein L14p/L23e VV1_RS03645 PF00366 Ribosomal protein S17 VV1_RS03650 PF00831 Ribosomal L29 protein VV1_RS03655 PF00252 Ribosomal protein L16p/L10e VV1_RS03660 PF00189 Ribosomal protein S3, C-terminal domain VV1_RS03660 PF07650 KH domain VV1_RS03665 PF00237 Ribosomal protein L22p/L17e VV1_RS03670 PF00203 Ribosomal protein S19 VV1_RS03675 PF03947 Ribosomal Proteins L2, C-terminal domain VV1_RS03675 PF00181 Ribosomal Proteins L2, RNA binding domain VV1_RS03680 PF00276 Ribosomal protein L23 VV1_RS03685 PF00573 Ribosomal protein L4/L1 family VV1_RS03690 PF00297 Ribosomal protein L3 VV1_RS03695 PF00338 Ribosomal protein S10p/S20e VV1_RS03700 PF13322 Domain of unknown function (DUF4092) VV1_RS03700 PF17291 N-terminal domain of M60-like peptidases VV1_RS03700 PF13402 Peptidase M60, enhancin and enhancin-like VV1_RS03705 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VV1_RS03705 PF00753 Metallo-beta-lactamase superfamily VV1_RS03705 PF10996 Beta-Casp domain VV1_RS03715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VV1_RS03715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VV1_RS03720 PF02719 Polysaccharide biosynthesis protein VV1_RS03725 PF02397 Bacterial sugar transferase VV1_RS03730 PF01370 NAD dependent epimerase/dehydratase family VV1_RS03770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VV1_RS03770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VV1_RS03770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VV1_RS03775 PF02350 UDP-N-acetylglucosamine 2-epimerase VV1_RS03780 PF13614 AAA domain VV1_RS03780 PF13807 G-rich domain on putative tyrosine kinase VV1_RS03780 PF02706 Chain length determinant protein VV1_RS03785 PF01451 Low molecular weight phosphotyrosine protein phosphatase VV1_RS03795 PF02563 Polysaccharide biosynthesis/export protein VV1_RS03795 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VV1_RS03795 PF10531 SLBB domain VV1_RS03825 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VV1_RS03835 PF06082 Exopolysaccharide biosynthesis protein YbjH VV1_RS03840 PF01370 NAD dependent epimerase/dehydratase family VV1_RS03845 PF03279 Bacterial lipid A biosynthesis acyltransferase VV1_RS03850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV1_RS03855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VV1_RS03875 PF02348 Cytidylyltransferase VV1_RS03880 PF00483 Nucleotidyl transferase VV1_RS03895 PF02350 UDP-N-acetylglucosamine 2-epimerase VV1_RS03900 PF03102 NeuB family VV1_RS03900 PF08666 SAF domain VV1_RS03910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VV1_RS03915 PF02719 Polysaccharide biosynthesis protein VV1_RS03925 PF00884 Sulfatase VV1_RS03925 PF11893 Domain of unknown function (DUF3413) VV1_RS03935 PF01219 Prokaryotic diacylglycerol kinase VV1_RS03940 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV1_RS03945 PF00535 Glycosyl transferase family 2 VV1_RS03950 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV1_RS03955 PF01467 Cytidylyltransferase-like VV1_RS03965 PF06827 Zinc finger found in FPG and IleRS VV1_RS03965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VV1_RS03965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VV1_RS03975 PF00471 Ribosomal protein L33 VV1_RS03980 PF00830 Ribosomal L28 family VV1_RS03985 PF04002 RadC-like JAB domain VV1_RS03990 PF02743 Cache domain VV1_RS03990 PF00672 HAMP domain VV1_RS03990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS03995 PF04127 DNA / pantothenate metabolism flavoprotein VV1_RS03995 PF02441 Flavoprotein VV1_RS04000 PF00440 Bacterial regulatory proteins, tetR family VV1_RS04005 PF03279 Bacterial lipid A biosynthesis acyltransferase VV1_RS04010 PF00156 Phosphoribosyl transferase domain VV1_RS04015 PF01138 3' exoribonuclease family, domain 1 VV1_RS04015 PF03725 3' exoribonuclease family, domain 2 VV1_RS04020 PF03755 YicC-like family, N-terminal region VV1_RS04020 PF08340 Domain of unknown function (DUF1732) VV1_RS04025 PF00892 EamA-like transporter family VV1_RS04040 PF00005 ABC transporter VV1_RS04040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS04045 PF00005 ABC transporter VV1_RS04045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS04050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV1_RS04055 PF12911 N-terminal TM domain of oligopeptide transport permease C VV1_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS04060 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS04065 PF07715 TonB-dependent Receptor Plug Domain VV1_RS04065 PF00593 TonB dependent receptor VV1_RS04075 PF01618 MotA/TolQ/ExbB proton channel family VV1_RS04080 PF01618 MotA/TolQ/ExbB proton channel family VV1_RS04085 PF02472 Biopolymer transport protein ExbD/TolR VV1_RS04100 PF00625 Guanylate kinase VV1_RS04105 PF01192 RNA polymerase Rpb6 VV1_RS04110 PF04607 Region found in RelA / SpoT proteins VV1_RS04110 PF13291 ACT domain VV1_RS04110 PF02824 TGS domain VV1_RS04115 PF00588 SpoU rRNA Methylase family VV1_RS04115 PF12105 SpoU, rRNA methylase, C-terminal VV1_RS04120 PF00270 DEAD/DEAH box helicase VV1_RS04120 PF00271 Helicase conserved C-terminal domain VV1_RS04120 PF17191 RecG wedge domain VV1_RS04125 PF00860 Permease family VV1_RS04130 PF00672 HAMP domain VV1_RS04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS04130 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS04135 PF00486 Transcriptional regulatory protein, C terminal VV1_RS04135 PF00072 Response regulator receiver domain VV1_RS04140 PF01272 Transcription elongation factor, GreA/GreB, C-term VV1_RS04140 PF03449 Transcription elongation factor, N-terminal VV1_RS04145 PF17674 HHH domain VV1_RS04145 PF00575 S1 RNA binding domain VV1_RS04145 PF09371 Tex-like protein N-terminal domain VV1_RS04145 PF16921 Tex protein YqgF-like domain VV1_RS04155 PF00561 alpha/beta hydrolase fold VV1_RS04165 PF01521 Iron-sulphur cluster biosynthesis VV1_RS04165 PF01106 NifU-like domain VV1_RS04170 PF00293 NUDIX domain VV1_RS04175 PF00459 Inositol monophosphatase family VV1_RS04180 PF01203 Type II secretion system (T2SS), protein N VV1_RS04185 PF04612 Type II secretion system (T2SS), protein M VV1_RS04190 PF12693 GspL periplasmic domain VV1_RS04190 PF05134 Type II secretion system (T2SS), protein L VV1_RS04195 PF03934 Type II secretion system (T2SS), protein K VV1_RS04200 PF07963 Prokaryotic N-terminal methylation motif VV1_RS04200 PF11612 Type II secretion system (T2SS), protein J VV1_RS04205 PF07963 Prokaryotic N-terminal methylation motif VV1_RS04205 PF02501 Type II secretion system (T2SS), protein I VV1_RS04210 PF12019 Type II transport protein GspH VV1_RS04215 PF08334 Type II secretion system (T2SS), protein G VV1_RS04215 PF07963 Prokaryotic N-terminal methylation motif VV1_RS04220 PF00482 Type II secretion system (T2SS), protein F VV1_RS04225 PF00437 Type II/IV secretion system protein VV1_RS04230 PF03958 Bacterial type II/III secretion system short domain VV1_RS04230 PF00263 Bacterial type II and III secretion system protein VV1_RS04235 PF11356 Type II secretion system protein C VV1_RS04240 PF01479 S4 domain VV1_RS04245 PF01430 Hsp33 protein VV1_RS04250 PF01293 Phosphoenolpyruvate carboxykinase VV1_RS04260 PF00583 Acetyltransferase (GNAT) family VV1_RS04260 PF09500 Putative thioesterase (yiiD_Cterm) VV1_RS04265 PF02580 D-Tyr-tRNA(Tyr) deacylase VV1_RS04270 PF03631 Virulence factor BrkB VV1_RS04285 PF00679 Elongation factor G C-terminus VV1_RS04285 PF03144 Elongation factor Tu domain 2 VV1_RS04285 PF00009 Elongation factor Tu GTP binding domain VV1_RS04290 PF00120 Glutamine synthetase, catalytic domain VV1_RS04290 PF03951 Glutamine synthetase, beta-Grasp domain VV1_RS04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS04300 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS04300 PF00989 PAS fold VV1_RS04305 PF02954 Bacterial regulatory protein, Fis family VV1_RS04305 PF00072 Response regulator receiver domain VV1_RS04305 PF00158 Sigma-54 interaction domain VV1_RS04310 PF03707 Bacterial signalling protein N terminal repeat VV1_RS04310 PF00563 EAL domain VV1_RS04310 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS04315 PF06969 HemN C-terminal domain VV1_RS04315 PF04055 Radical SAM superfamily VV1_RS04320 PF10675 Protein of unknown function (DUF2489) VV1_RS04325 PF04220 Der GTPase activator (YihI) VV1_RS04335 PF00034 Cytochrome c VV1_RS04340 PF01926 50S ribosome-binding GTPase VV1_RS04345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VV1_RS04345 PF01612 3'-5' exonuclease VV1_RS04345 PF00476 DNA polymerase family A VV1_RS04345 PF01367 5'-3' exonuclease, C-terminal SAM fold VV1_RS04350 PF00490 Delta-aminolevulinic acid dehydratase VV1_RS04355 PF01026 TatD related DNase VV1_RS04360 PF00902 Sec-independent protein translocase protein (TatC) VV1_RS04365 PF02416 mttA/Hcf106 family VV1_RS04370 PF02416 mttA/Hcf106 family VV1_RS04375 PF03109 ABC1 family VV1_RS04380 PF02036 SCP-2 sterol transfer family VV1_RS04385 PF01209 ubiE/COQ5 methyltransferase family VV1_RS04390 PF02646 RmuC family VV1_RS04405 PF13358 DDE superfamily endonuclease VV1_RS04480 PF00175 Oxidoreductase NAD-binding domain VV1_RS04485 PF00175 Oxidoreductase NAD-binding domain VV1_RS04485 PF00111 2Fe-2S iron-sulfur cluster binding domain VV1_RS04485 PF00970 Oxidoreductase FAD-binding domain VV1_RS04490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VV1_RS04500 PF07498 Rho termination factor, N-terminal domain VV1_RS04500 PF07497 Rho termination factor, RNA-binding domain VV1_RS04500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV1_RS04505 PF00085 Thioredoxin VV1_RS04510 PF00271 Helicase conserved C-terminal domain VV1_RS04510 PF00270 DEAD/DEAH box helicase VV1_RS04515 PF02541 Ppx/GppA phosphatase family VV1_RS04520 PF02592 Putative vitamin uptake transporter VV1_RS04530 PF16124 RecQ zinc-binding VV1_RS04530 PF00270 DEAD/DEAH box helicase VV1_RS04530 PF00271 Helicase conserved C-terminal domain VV1_RS04530 PF09382 RQC domain VV1_RS04530 PF00570 HRDC domain VV1_RS04535 PF00892 EamA-like transporter family VV1_RS04545 PF01810 LysE type translocator VV1_RS04550 PF13361 UvrD-like helicase C-terminal domain VV1_RS04550 PF00580 UvrD/REP helicase N-terminal domain VV1_RS04560 PF05114 Protein of unknown function (DUF692) VV1_RS04580 PF07690 Major Facilitator Superfamily VV1_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS04585 PF03466 LysR substrate binding domain VV1_RS04590 PF00557 Metallopeptidase family M24 VV1_RS04590 PF00557 Metallopeptidase family M24 VV1_RS04590 PF01321 Creatinase/Prolidase N-terminal domain VV1_RS04590 PF01321 Creatinase/Prolidase N-terminal domain VV1_RS04595 PF04055 Radical SAM superfamily VV1_RS04595 PF06968 Biotin and Thiamin Synthesis associated domain VV1_RS04600 PF05690 Thiazole biosynthesis protein ThiG VV1_RS04610 PF00899 ThiF family VV1_RS04615 PF02581 Thiamine monophosphate synthase VV1_RS04620 PF01964 Radical SAM ThiC family VV1_RS04620 PF13667 ThiC-associated domain VV1_RS04625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VV1_RS04630 PF00394 Multicopper oxidase VV1_RS04630 PF07731 Multicopper oxidase VV1_RS04630 PF07732 Multicopper oxidase VV1_RS04640 PF13358 DDE superfamily endonuclease VV1_RS04675 PF12724 Flavodoxin domain VV1_RS04680 PF02386 Cation transport protein VV1_RS04685 PF01205 Uncharacterized protein family UPF0029 VV1_RS04685 PF09186 Domain of unknown function (DUF1949) VV1_RS04690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VV1_RS04690 PF00378 Enoyl-CoA hydratase/isomerase VV1_RS04690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VV1_RS04695 PF00108 Thiolase, N-terminal domain VV1_RS04695 PF02803 Thiolase, C-terminal domain VV1_RS04700 PF00107 Zinc-binding dehydrogenase VV1_RS04700 PF08240 Alcohol dehydrogenase GroES-like domain VV1_RS04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS04705 PF03466 LysR substrate binding domain VV1_RS04715 PF01206 Sulfurtransferase TusA VV1_RS04725 PF01169 Uncharacterized protein family UPF0016 VV1_RS04730 PF02091 Glycyl-tRNA synthetase alpha subunit VV1_RS04735 PF02092 Glycyl-tRNA synthetase beta subunit VV1_RS04735 PF05746 DALR anticodon binding domain VV1_RS04745 PF00155 Aminotransferase class I and II VV1_RS04750 PF00563 EAL domain VV1_RS04750 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS04750 PF03707 Bacterial signalling protein N terminal repeat VV1_RS04755 PF00011 Hsp20/alpha crystallin family VV1_RS04760 PF01751 Toprim domain VV1_RS04760 PF18053 DNA gyrase B subunit insert domain VV1_RS04760 PF00986 DNA gyrase B subunit, carboxyl terminus VV1_RS04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS04760 PF00204 DNA gyrase B VV1_RS04765 PF02463 RecF/RecN/SMC N terminal domain VV1_RS04770 PF00712 DNA polymerase III beta subunit, N-terminal domain VV1_RS04770 PF02768 DNA polymerase III beta subunit, C-terminal domain VV1_RS04770 PF02767 DNA polymerase III beta subunit, central domain VV1_RS04775 PF00308 Bacterial dnaA protein VV1_RS04775 PF08299 Bacterial dnaA protein helix-turn-helix VV1_RS04775 PF11638 DnaA N-terminal domain VV1_RS04780 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV1_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS04790 PF00005 ABC transporter VV1_RS04795 PF00468 Ribosomal protein L34 VV1_RS04800 PF00825 Ribonuclease P VV1_RS04805 PF02096 60Kd inner membrane protein VV1_RS04805 PF14849 YidC periplasmic domain VV1_RS04810 PF12631 MnmE helical domain VV1_RS04810 PF10396 GTP-binding protein TrmE N-terminus VV1_RS04810 PF01926 50S ribosome-binding GTPase VV1_RS04815 PF00258 Flavodoxin VV1_RS04820 PF13932 GidA associated domain VV1_RS04820 PF01134 Glucose inhibited division protein A VV1_RS04825 PF02527 rRNA small subunit methyltransferase G VV1_RS04830 PF13614 AAA domain VV1_RS04835 PF17762 HTH domain found in ParB protein VV1_RS04835 PF02195 ParB-like nuclease domain VV1_RS04840 PF03899 ATP synthase I chain VV1_RS04845 PF00119 ATP synthase A chain VV1_RS04850 PF00137 ATP synthase subunit C VV1_RS04855 PF00430 ATP synthase B/B' CF(0) VV1_RS04860 PF00213 ATP synthase delta (OSCP) subunit VV1_RS04865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV1_RS04865 PF00306 ATP synthase alpha/beta chain, C terminal domain VV1_RS04865 PF02874 ATP synthase alpha/beta family, beta-barrel domain VV1_RS04870 PF00231 ATP synthase VV1_RS04875 PF02874 ATP synthase alpha/beta family, beta-barrel domain VV1_RS04875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV1_RS04880 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VV1_RS04880 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VV1_RS04885 PF00132 Bacterial transferase hexapeptide (six repeats) VV1_RS04885 PF14602 Hexapeptide repeat of succinyl-transferase VV1_RS04885 PF12804 MobA-like NTP transferase domain VV1_RS04890 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS04895 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV1_RS04900 PF07690 Major Facilitator Superfamily VV1_RS04905 PF03466 LysR substrate binding domain VV1_RS04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS04910 PF00585 C-terminal regulatory domain of Threonine dehydratase VV1_RS04910 PF00291 Pyridoxal-phosphate dependent enzyme VV1_RS04915 PF00920 Dehydratase family VV1_RS04920 PF01063 Amino-transferase class IV VV1_RS04930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV1_RS04930 PF00205 Thiamine pyrophosphate enzyme, central domain VV1_RS04930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV1_RS04935 PF13335 Magnesium chelatase, subunit ChlI C-terminal VV1_RS04935 PF01078 Magnesium chelatase, subunit ChlI VV1_RS04945 PF01553 Acyltransferase VV1_RS04950 PF01323 DSBA-like thioredoxin domain VV1_RS04955 PF01636 Phosphotransferase enzyme family VV1_RS04960 PF12801 4Fe-4S binding domain VV1_RS04960 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VV1_RS04960 PF13746 4Fe-4S dicluster domain VV1_RS04965 PF06288 Protein of unknown function (DUF1040) VV1_RS04970 PF07070 SpoOM protein VV1_RS04975 PF03006 Haemolysin-III related VV1_RS04980 PF02386 Cation transport protein VV1_RS04985 PF02254 TrkA-N domain VV1_RS04985 PF02080 TrkA-C domain VV1_RS04990 PF01029 NusB family VV1_RS04990 PF01189 16S rRNA methyltransferase RsmB/F VV1_RS04995 PF02911 Formyl transferase, C-terminal domain VV1_RS04995 PF00551 Formyl transferase VV1_RS05000 PF01327 Polypeptide deformylase VV1_RS05010 PF02481 DNA recombination-mediator protein A VV1_RS05010 PF17782 DprA winged helix domain VV1_RS05015 PF04361 Protein of unknown function (DUF494) VV1_RS05020 PF01396 Topoisomerase DNA binding C4 zinc finger VV1_RS05025 PF02222 ATP-grasp domain VV1_RS05025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VV1_RS05030 PF00731 AIR carboxylase VV1_RS05035 PF01300 Telomere recombination VV1_RS05040 PF01218 Coproporphyrinogen III oxidase VV1_RS05045 PF01488 Shikimate / quinate 5-dehydrogenase VV1_RS05045 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VV1_RS05045 PF08501 Shikimate dehydrogenase substrate binding domain VV1_RS05050 PF07369 Protein of unknown function (DUF1488) VV1_RS05055 PF00132 Bacterial transferase hexapeptide (six repeats) VV1_RS05095 PF13358 DDE superfamily endonuclease VV1_RS05105 PF03466 LysR substrate binding domain VV1_RS05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS05110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VV1_RS05110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VV1_RS05115 PF04380 Membrane fusogenic activity VV1_RS05120 PF00873 AcrB/AcrD/AcrF family VV1_RS05125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV1_RS05130 PF00440 Bacterial regulatory proteins, tetR family VV1_RS05135 PF13361 UvrD-like helicase C-terminal domain VV1_RS05135 PF00580 UvrD/REP helicase N-terminal domain VV1_RS05140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VV1_RS05170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS05170 PF00005 ABC transporter VV1_RS05175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV1_RS05180 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS05185 PF12911 N-terminal TM domain of oligopeptide transport permease C VV1_RS05185 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS05220 PF00069 Protein kinase domain VV1_RS05220 PF03793 PASTA domain VV1_RS05230 PF00072 Response regulator receiver domain VV1_RS05235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VV1_RS05235 PF00356 Bacterial regulatory proteins, lacI family VV1_RS05240 PF00920 Dehydratase family VV1_RS05245 PF01202 Shikimate kinase VV1_RS05250 PF02447 GntP family permease VV1_RS05255 PF01081 KDPG and KHG aldolase VV1_RS05275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV1_RS05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS05280 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VV1_RS05285 PF01432 Peptidase family M3 VV1_RS05290 PF01037 Lrp/AsnC ligand binding domain VV1_RS05295 PF00563 EAL domain VV1_RS05295 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS05295 PF08448 PAS fold VV1_RS05300 PF04445 Putative SAM-dependent methyltransferase VV1_RS05310 PF00892 EamA-like transporter family VV1_RS05315 PF00582 Universal stress protein family VV1_RS05320 PF00210 Ferritin-like domain VV1_RS05325 PF10625 Universal stress protein B (UspB) VV1_RS05340 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VV1_RS05345 PF02602 Uroporphyrinogen-III synthase HemD VV1_RS05350 PF03900 Porphobilinogen deaminase, C-terminal domain VV1_RS05350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VV1_RS05355 PF12633 Adenylate cyclase NT domain VV1_RS05355 PF01295 Adenylate cyclase, class-I VV1_RS05360 PF01491 Frataxin-like domain VV1_RS05370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VV1_RS05370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VV1_RS05375 PF01678 Diaminopimelate epimerase VV1_RS05385 PF02899 Phage integrase, N-terminal SAM-like domain VV1_RS05385 PF00589 Phage integrase family VV1_RS05390 PF13419 Haloacid dehalogenase-like hydrolase VV1_RS05395 PF08495 FIST N domain VV1_RS05395 PF10442 FIST C domain VV1_RS05395 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS05395 PF00563 EAL domain VV1_RS05400 PF03942 DTW domain VV1_RS05420 PF12146 Serine aminopeptidase, S33 VV1_RS05425 PF01810 LysE type translocator VV1_RS05430 PF00563 EAL domain VV1_RS05430 PF08668 HDOD domain VV1_RS05435 PF01022 Bacterial regulatory protein, arsR family VV1_RS05440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV1_RS05440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV1_RS05480 PF01914 MarC family integral membrane protein VV1_RS05495 PF00448 SRP54-type protein, GTPase domain VV1_RS05495 PF02881 SRP54-type protein, helical bundle domain VV1_RS05500 PF00005 ABC transporter VV1_RS05505 PF18075 FtsX extracellular domain VV1_RS05510 PF00140 Sigma-70 factor, region 1.2 VV1_RS05510 PF04542 Sigma-70 region 2 VV1_RS05510 PF04545 Sigma-70, region 4 VV1_RS05515 PF00581 Rhodanese-like domain VV1_RS05520 PF01694 Rhomboid family VV1_RS05520 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VV1_RS05525 PF03748 Flagellar basal body-associated protein FliL VV1_RS05530 PF04345 Chorismate lyase VV1_RS05535 PF01040 UbiA prenyltransferase family VV1_RS05540 PF01553 Acyltransferase VV1_RS05545 PF00717 Peptidase S24-like VV1_RS05545 PF01726 LexA DNA binding domain VV1_RS05555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV1_RS05555 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS05560 PF00440 Bacterial regulatory proteins, tetR family VV1_RS05570 PF05958 tRNA (Uracil-5-)-methyltransferase VV1_RS05575 PF00593 TonB dependent receptor VV1_RS05575 PF07715 TonB-dependent Receptor Plug Domain VV1_RS05585 PF01177 Asp/Glu/Hydantoin racemase VV1_RS05630 PF13358 DDE superfamily endonuclease VV1_RS05640 PF13091 PLD-like domain VV1_RS05650 PF01565 FAD binding domain VV1_RS05650 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VV1_RS05655 PF02237 Biotin protein ligase C terminal domain VV1_RS05655 PF08279 HTH domain VV1_RS05655 PF03099 Biotin/lipoate A/B protein ligase family VV1_RS05660 PF00485 Phosphoribulokinase / Uridine kinase family VV1_RS05685 PF03143 Elongation factor Tu C-terminal domain VV1_RS05685 PF00009 Elongation factor Tu GTP binding domain VV1_RS05685 PF03144 Elongation factor Tu domain 2 VV1_RS05690 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VV1_RS05695 PF00467 KOW motif VV1_RS05695 PF02357 Transcription termination factor nusG VV1_RS05700 PF00298 Ribosomal protein L11, RNA binding domain VV1_RS05700 PF03946 Ribosomal protein L11, N-terminal domain VV1_RS05705 PF00687 Ribosomal protein L1p/L10e family VV1_RS05710 PF00466 Ribosomal protein L10 VV1_RS05715 PF00542 Ribosomal protein L7/L12 C-terminal domain VV1_RS05715 PF16320 Ribosomal protein L7/L12 dimerisation domain VV1_RS05720 PF10385 RNA polymerase beta subunit external 1 domain VV1_RS05720 PF04565 RNA polymerase Rpb2, domain 3 VV1_RS05720 PF04561 RNA polymerase Rpb2, domain 2 VV1_RS05720 PF00562 RNA polymerase Rpb2, domain 6 VV1_RS05720 PF04560 RNA polymerase Rpb2, domain 7 VV1_RS05720 PF04563 RNA polymerase beta subunit VV1_RS05725 PF04998 RNA polymerase Rpb1, domain 5 VV1_RS05725 PF04983 RNA polymerase Rpb1, domain 3 VV1_RS05725 PF05000 RNA polymerase Rpb1, domain 4 VV1_RS05725 PF00623 RNA polymerase Rpb1, domain 2 VV1_RS05725 PF04997 RNA polymerase Rpb1, domain 1 VV1_RS05730 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VV1_RS05735 PF00293 NUDIX domain VV1_RS05735 PF09297 NADH pyrophosphatase zinc ribbon domain VV1_RS05750 PF01208 Uroporphyrinogen decarboxylase (URO-D) VV1_RS05755 PF03167 Uracil DNA glycosylase superfamily VV1_RS05760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV1_RS05760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV1_RS05765 PF04222 Protein of unknown function (DUF416) VV1_RS05770 PF00571 CBS domain VV1_RS05770 PF01595 Cyclin M transmembrane N-terminal domain VV1_RS05775 PF00216 Bacterial DNA-binding protein VV1_RS05785 PF02844 Phosphoribosylglycinamide synthetase, N domain VV1_RS05785 PF02843 Phosphoribosylglycinamide synthetase, C domain VV1_RS05785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VV1_RS05790 PF02142 MGS-like domain VV1_RS05790 PF01808 AICARFT/IMPCHase bienzyme VV1_RS05795 PF13411 MerR HTH family regulatory protein VV1_RS05800 PF00672 HAMP domain VV1_RS05800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS05800 PF17200 Single Cache domain 2 VV1_RS05805 PF02954 Bacterial regulatory protein, Fis family VV1_RS05810 PF01207 Dihydrouridine synthase (Dus) VV1_RS05820 PF02785 Biotin carboxylase C-terminal domain VV1_RS05820 PF00289 Biotin carboxylase, N-terminal domain VV1_RS05820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VV1_RS05825 PF00364 Biotin-requiring enzyme VV1_RS05830 PF01220 Dehydroquinase class II VV1_RS05835 PF13193 AMP-binding enzyme C-terminal domain VV1_RS05835 PF00501 AMP-binding enzyme VV1_RS05835 PF16177 Acetyl-coenzyme A synthetase N-terminus VV1_RS05850 PF12832 MFS_1 like family VV1_RS05855 PF00672 HAMP domain VV1_RS05855 PF00072 Response regulator receiver domain VV1_RS05855 PF01627 Hpt domain VV1_RS05855 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS05875 PF00474 Sodium:solute symporter family VV1_RS05885 PF01914 MarC family integral membrane protein VV1_RS05890 PF00072 Response regulator receiver domain VV1_RS05890 PF00196 Bacterial regulatory proteins, luxR family VV1_RS05895 PF02683 Cytochrome C biogenesis protein transmembrane region VV1_RS05895 PF11412 Disulphide bond corrector protein DsbC VV1_RS05900 PF03605 Anaerobic c4-dicarboxylate membrane transporter VV1_RS05905 PF00206 Lyase VV1_RS05905 PF10415 Fumarase C C-terminus VV1_RS05910 PF04186 FxsA cytoplasmic membrane protein VV1_RS05915 PF00588 SpoU rRNA Methylase family VV1_RS05920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VV1_RS05920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VV1_RS05925 PF00672 HAMP domain VV1_RS05925 PF16527 Two-component sensor protein CpxA, periplasmic domain VV1_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS05925 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS05930 PF00486 Transcriptional regulatory protein, C terminal VV1_RS05930 PF00072 Response regulator receiver domain VV1_RS05935 PF07813 LTXXQ motif family protein VV1_RS05940 PF16916 Dimerisation domain of Zinc Transporter VV1_RS05940 PF01545 Cation efflux family VV1_RS05945 PF00365 Phosphofructokinase VV1_RS05950 PF01554 MatE VV1_RS05955 PF00166 Chaperonin 10 Kd subunit VV1_RS05960 PF00118 TCP-1/cpn60 chaperonin family VV1_RS05970 PF02308 MgtC family VV1_RS05975 PF04055 Radical SAM superfamily VV1_RS05980 PF09285 Elongation factor P, C-terminal VV1_RS05980 PF01132 Elongation factor P (EF-P) OB domain VV1_RS05980 PF08207 Elongation factor P (EF-P) KOW-like domain VV1_RS05990 PF02313 Fumarate reductase subunit D VV1_RS05995 PF02300 Fumarate reductase subunit C VV1_RS06000 PF13183 4Fe-4S dicluster domain VV1_RS06000 PF13085 2Fe-2S iron-sulfur cluster binding domain VV1_RS06005 PF02910 Fumarate reductase flavoprotein C-term VV1_RS06005 PF00890 FAD binding domain VV1_RS06010 PF00152 tRNA synthetases class II (D, K and N) VV1_RS06020 PF08360 QacR-like protein, C-terminal region VV1_RS06020 PF00440 Bacterial regulatory proteins, tetR family VV1_RS06030 PF01609 Transposase DDE domain VV1_RS06030 PF13006 Insertion element 4 transposase N-terminal VV1_RS06035 PF01551 Peptidase family M23 VV1_RS06040 PF00132 Bacterial transferase hexapeptide (six repeats) VV1_RS06040 PF06426 Serine acetyltransferase, N-terminal VV1_RS06045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VV1_RS06045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VV1_RS06050 PF02556 Preprotein translocase subunit SecB VV1_RS06055 PF00581 Rhodanese-like domain VV1_RS06060 PF01676 Metalloenzyme superfamily VV1_RS06060 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VV1_RS06070 PF00939 Sodium:sulfate symporter transmembrane region VV1_RS06075 PF02666 Phosphatidylserine decarboxylase VV1_RS06080 PF03193 RsgA GTPase VV1_RS06085 PF00929 Exonuclease VV1_RS06135 PF08331 Domain of unknown function (DUF1730) VV1_RS06140 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VV1_RS06145 PF01520 N-acetylmuramoyl-L-alanine amidase VV1_RS06150 PF08676 MutL C terminal dimerisation domain VV1_RS06150 PF01119 DNA mismatch repair protein, C-terminal domain VV1_RS06160 PF17209 Hfq protein VV1_RS06165 PF13167 GTP-binding GTPase N-terminal VV1_RS06165 PF16360 GTP-binding GTPase Middle Region VV1_RS06165 PF01926 50S ribosome-binding GTPase VV1_RS06170 PF12221 Bacterial membrane protein N terminal VV1_RS06170 PF01145 SPFH domain / Band 7 family VV1_RS06175 PF01145 SPFH domain / Band 7 family VV1_RS06180 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VV1_RS06185 PF00709 Adenylosuccinate synthetase VV1_RS06190 PF08238 Sel1 repeat VV1_RS06195 PF00175 Oxidoreductase NAD-binding domain VV1_RS06195 PF00970 Oxidoreductase FAD-binding domain VV1_RS06195 PF00042 Globin VV1_RS06200 PF02082 Transcriptional regulator VV1_RS06205 PF01979 Amidohydrolase family VV1_RS06210 PF08461 Ribonuclease R winged-helix domain VV1_RS06210 PF00773 RNB domain VV1_RS06210 PF17876 Cold shock domain VV1_RS06210 PF00575 S1 RNA binding domain VV1_RS06210 PF08206 Ribonuclease B OB domain VV1_RS06215 PF00588 SpoU rRNA Methylase family VV1_RS06215 PF08032 RNA 2'-O ribose methyltransferase substrate binding VV1_RS06220 PF13419 Haloacid dehalogenase-like hydrolase VV1_RS06225 PF00579 tRNA synthetases class I (W and Y) VV1_RS06240 PF00117 Glutamine amidotransferase class-I VV1_RS06245 PF00202 Aminotransferase class-III VV1_RS06250 PF04958 Arginine N-succinyltransferase beta subunit VV1_RS06255 PF00171 Aldehyde dehydrogenase family VV1_RS06265 PF13545 Crp-like helix-turn-helix domain VV1_RS06265 PF00027 Cyclic nucleotide-binding domain VV1_RS06270 PF00485 Phosphoribulokinase / Uridine kinase family VV1_RS06275 PF06794 Uncharacterised protein family (UPF0270) VV1_RS06280 PF00561 alpha/beta hydrolase fold VV1_RS06290 PF00005 ABC transporter VV1_RS06290 PF12848 ABC transporter VV1_RS06295 PF02525 Flavodoxin-like fold VV1_RS06300 PF00999 Sodium/hydrogen exchanger family VV1_RS06300 PF02254 TrkA-N domain VV1_RS06310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV1_RS06315 PF01112 Asparaginase VV1_RS06320 PF04102 SlyX VV1_RS06330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VV1_RS06330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV1_RS06335 PF13309 HTH domain VV1_RS06335 PF08348 YheO-like PAS domain VV1_RS06340 PF02635 DsrE/DsrF-like family VV1_RS06345 PF02635 DsrE/DsrF-like family VV1_RS06350 PF04077 DsrH like protein VV1_RS06355 PF00164 Ribosomal protein S12/S23 VV1_RS06360 PF00177 Ribosomal protein S7p/S5e VV1_RS06365 PF00009 Elongation factor Tu GTP binding domain VV1_RS06365 PF03764 Elongation factor G, domain IV VV1_RS06365 PF14492 Elongation Factor G, domain II VV1_RS06365 PF00679 Elongation factor G C-terminus VV1_RS06365 PF03144 Elongation factor Tu domain 2 VV1_RS06370 PF03144 Elongation factor Tu domain 2 VV1_RS06370 PF03143 Elongation factor Tu C-terminal domain VV1_RS06370 PF00009 Elongation factor Tu GTP binding domain VV1_RS06375 PF04324 BFD-like [2Fe-2S] binding domain VV1_RS06380 PF00210 Ferritin-like domain VV1_RS06385 PF16363 GDP-mannose 4,6 dehydratase VV1_RS06390 PF00121 Triosephosphate isomerase VV1_RS06415 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VV1_RS06420 PF06005 Cell division protein ZapB VV1_RS06425 PF03737 Aldolase/RraA VV1_RS06430 PF01040 UbiA prenyltransferase family VV1_RS06435 PF10431 C-terminal, D2-small domain, of ClpB protein VV1_RS06435 PF07724 AAA domain (Cdc48 subfamily) VV1_RS06435 PF00004 ATPase family associated with various cellular activities (AAA) VV1_RS06440 PF00227 Proteasome subunit VV1_RS06450 PF00356 Bacterial regulatory proteins, lacI family VV1_RS06455 PF17764 3′ DNA-binding domain (3′BD) VV1_RS06455 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VV1_RS06455 PF00271 Helicase conserved C-terminal domain VV1_RS06455 PF00270 DEAD/DEAH box helicase VV1_RS06455 PF18074 Primosomal protein N C-terminal domain VV1_RS06460 PF01197 Ribosomal protein L31 VV1_RS06465 PF00390 Malic enzyme, N-terminal domain VV1_RS06465 PF03949 Malic enzyme, NAD binding domain VV1_RS06470 PF01340 Met Apo-repressor, MetJ VV1_RS06475 PF01053 Cys/Met metabolism PLP-dependent enzyme VV1_RS06480 PF00742 Homoserine dehydrogenase VV1_RS06480 PF00696 Amino acid kinase family VV1_RS06480 PF03447 Homoserine dehydrogenase, NAD binding domain VV1_RS06485 PF02219 Methylenetetrahydrofolate reductase VV1_RS06495 PF00311 Phosphoenolpyruvate carboxylase VV1_RS06500 PF01546 Peptidase family M20/M25/M40 VV1_RS06500 PF07687 Peptidase dimerisation domain VV1_RS06505 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV1_RS06505 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV1_RS06510 PF00696 Amino acid kinase family VV1_RS06515 PF00764 Arginosuccinate synthase VV1_RS06520 PF00206 Lyase VV1_RS06520 PF00583 Acetyltransferase (GNAT) family VV1_RS06520 PF14698 Argininosuccinate lyase C-terminal VV1_RS06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS06530 PF03466 LysR substrate binding domain VV1_RS06535 PF00905 Penicillin binding protein transpeptidase domain VV1_RS06535 PF17092 Penicillin-binding protein OB-like domain VV1_RS06535 PF00912 Transglycosylase VV1_RS06560 PF00263 Bacterial type II and III secretion system protein VV1_RS06560 PF03958 Bacterial type II/III secretion system short domain VV1_RS06560 PF07660 Secretin and TonB N terminus short domain VV1_RS06560 PF11741 AMIN domain VV1_RS06565 PF01202 Shikimate kinase VV1_RS06570 PF01761 3-dehydroquinate synthase VV1_RS06580 PF02086 D12 class N6 adenine-specific DNA methyltransferase VV1_RS06585 PF00834 Ribulose-phosphate 3 epimerase family VV1_RS06590 PF01250 Ribosomal protein S6 VV1_RS06595 PF00436 Single-strand binding protein family VV1_RS06600 PF01084 Ribosomal protein S18 VV1_RS06605 PF01281 Ribosomal protein L9, N-terminal domain VV1_RS06605 PF03948 Ribosomal protein L9, C-terminal domain VV1_RS06615 PF00772 DnaB-like helicase N terminal domain VV1_RS06615 PF03796 DnaB-like helicase C terminal domain VV1_RS06620 PF01168 Alanine racemase, N-terminal domain VV1_RS06620 PF00842 Alanine racemase, C-terminal domain VV1_RS06630 PF01894 Uncharacterised protein family UPF0047 VV1_RS06635 PF00342 Phosphoglucose isomerase VV1_RS06645 PF01475 Ferric uptake regulator family VV1_RS06650 PF01207 Dihydrouridine synthase (Dus) VV1_RS06670 PF00175 Oxidoreductase NAD-binding domain VV1_RS06670 PF00258 Flavodoxin VV1_RS06670 PF00667 FAD binding domain VV1_RS06675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VV1_RS06675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VV1_RS06680 PF01507 Phosphoadenosine phosphosulfate reductase family VV1_RS06720 PF00072 Response regulator receiver domain VV1_RS06720 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS06725 PF00999 Sodium/hydrogen exchanger family VV1_RS06730 PF02965 Vitamin B12 dependent methionine synthase, activation domain VV1_RS06730 PF02607 B12 binding domain VV1_RS06730 PF00809 Pterin binding enzyme VV1_RS06730 PF02310 B12 binding domain VV1_RS06730 PF02574 Homocysteine S-methyltransferase VV1_RS06735 PF00696 Amino acid kinase family VV1_RS06735 PF01842 ACT domain VV1_RS06740 PF00266 Aminotransferase class-V VV1_RS06750 PF17760 UvrA interaction domain VV1_RS06750 PF00005 ABC transporter VV1_RS06750 PF17755 UvrA DNA-binding domain VV1_RS06755 PF00483 Nucleotidyl transferase VV1_RS06760 PF00196 Bacterial regulatory proteins, luxR family VV1_RS06765 PF00436 Single-strand binding protein family VV1_RS06770 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS06770 PF00563 EAL domain VV1_RS06770 PF17157 Gammaproteobacterial periplasmic sensor domain VV1_RS06790 PF03958 Bacterial type II/III secretion system short domain VV1_RS06790 PF07660 Secretin and TonB N terminus short domain VV1_RS06790 PF00263 Bacterial type II and III secretion system protein VV1_RS06790 PF11741 AMIN domain VV1_RS06795 PF01471 Putative peptidoglycan binding domain VV1_RS06795 PF13401 AAA domain VV1_RS06805 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VV1_RS06805 PF00437 Type II/IV secretion system protein VV1_RS06810 PF00482 Type II secretion system (T2SS), protein F VV1_RS06820 PF07963 Prokaryotic N-terminal methylation motif VV1_RS06825 PF07963 Prokaryotic N-terminal methylation motif VV1_RS06860 PF04085 rod shape-determining protein MreC VV1_RS06865 PF04093 rod shape-determining protein MreD VV1_RS06870 PF02545 Maf-like protein VV1_RS06875 PF10150 Ribonuclease E/G family VV1_RS06875 PF00575 S1 RNA binding domain VV1_RS06880 PF13116 Protein of unknown function VV1_RS06880 PF13502 AsmA-like C-terminal region VV1_RS06885 PF00795 Carbon-nitrogen hydrolase VV1_RS06890 PF01523 Putative modulator of DNA gyrase VV1_RS06895 PF13638 PIN domain VV1_RS06895 PF02562 PhoH-like protein VV1_RS06900 PF00271 Helicase conserved C-terminal domain VV1_RS06900 PF18337 RapA N-terminal Tudor like domain VV1_RS06900 PF12137 RNA polymerase recycling family C-terminal VV1_RS06900 PF00176 SNF2 family N-terminal domain VV1_RS06900 PF18339 RapA N-terminal Tudor like domain 1 VV1_RS06905 PF00849 RNA pseudouridylate synthase VV1_RS06910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV1_RS06910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV1_RS06915 PF01042 Endoribonuclease L-PSP VV1_RS06920 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VV1_RS06920 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VV1_RS06925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VV1_RS06925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VV1_RS06930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VV1_RS06930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VV1_RS06940 PF06877 Regulator of ribonuclease activity B VV1_RS06950 PF00583 Acetyltransferase (GNAT) family VV1_RS06960 PF05987 Bacterial protein of unknown function (DUF898) VV1_RS06970 PF10458 Valyl tRNA synthetase tRNA binding arm VV1_RS06970 PF00133 tRNA synthetases class I (I, L, M and V) VV1_RS06970 PF08264 Anticodon-binding domain of tRNA VV1_RS06975 PF04364 DNA polymerase III chi subunit, HolC VV1_RS06980 PF02789 Cytosol aminopeptidase family, N-terminal domain VV1_RS06980 PF00883 Cytosol aminopeptidase family, catalytic domain VV1_RS06985 PF03739 Lipopolysaccharide export system permease LptF/LptG VV1_RS06990 PF03739 Lipopolysaccharide export system permease LptF/LptG VV1_RS07005 PF01522 Polysaccharide deacetylase VV1_RS07010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV1_RS07015 PF02378 Phosphotransferase system, EIIC VV1_RS07020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VV1_RS07025 PF11975 Family 4 glycosyl hydrolase C-terminal domain VV1_RS07025 PF02056 Family 4 glycosyl hydrolase VV1_RS07030 PF04794 YdjC-like protein VV1_RS07035 PF00356 Bacterial regulatory proteins, lacI family VV1_RS07045 PF00072 Response regulator receiver domain VV1_RS07130 PF17200 Single Cache domain 2 VV1_RS07130 PF00672 HAMP domain VV1_RS07130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS07150 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VV1_RS07150 PF01464 Transglycosylase SLT domain VV1_RS07155 PF04362 Bacterial Fe(2+) trafficking VV1_RS07160 PF14815 NUDIX domain VV1_RS07160 PF00633 Helix-hairpin-helix motif VV1_RS07160 PF00730 HhH-GPD superfamily base excision DNA repair protein VV1_RS07165 PF02390 Putative methyltransferase VV1_RS07170 PF04960 Glutaminase VV1_RS07180 PF06969 HemN C-terminal domain VV1_RS07180 PF04055 Radical SAM superfamily VV1_RS07185 PF01725 Ham1 family VV1_RS07195 PF02594 Uncharacterised ACR, YggU family COG1872 VV1_RS07200 PF02325 YGGT family VV1_RS07205 PF03807 NADP oxidoreductase coenzyme F420-dependent VV1_RS07205 PF14748 Pyrroline-5-carboxylate reductase dimerisation VV1_RS07210 PF01168 Alanine racemase, N-terminal domain VV1_RS07215 PF00437 Type II/IV secretion system protein VV1_RS07220 PF00437 Type II/IV secretion system protein VV1_RS07225 PF03652 Holliday junction resolvase VV1_RS07230 PF02622 Uncharacterized ACR, COG1678 VV1_RS07235 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VV1_RS07235 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VV1_RS07240 PF04452 RNA methyltransferase VV1_RS07250 PF04231 Endonuclease I VV1_RS07255 PF17283 SprT-like zinc ribbon domain VV1_RS07255 PF10263 SprT-like family VV1_RS07265 PF02772 S-adenosylmethionine synthetase, central domain VV1_RS07265 PF00438 S-adenosylmethionine synthetase, N-terminal domain VV1_RS07265 PF02773 S-adenosylmethionine synthetase, C-terminal domain VV1_RS07270 PF02779 Transketolase, pyrimidine binding domain VV1_RS07270 PF02780 Transketolase, C-terminal domain VV1_RS07270 PF00456 Transketolase, thiamine diphosphate binding domain VV1_RS07280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV1_RS07280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV1_RS07285 PF00162 Phosphoglycerate kinase VV1_RS07290 PF01116 Fructose-bisphosphate aldolase class-II VV1_RS07295 PF05552 Conserved TM helix VV1_RS07295 PF00924 Mechanosensitive ion channel VV1_RS07300 PF01810 LysE type translocator VV1_RS07305 PF03466 LysR substrate binding domain VV1_RS07305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS07315 PF01842 ACT domain VV1_RS07315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV1_RS07315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV1_RS07320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VV1_RS07325 PF01812 5-formyltetrahydrofolate cyclo-ligase family VV1_RS07330 PF05164 Cell division protein ZapA VV1_RS07335 PF03695 Uncharacterised protein family (UPF0149) VV1_RS07340 PF01494 FAD binding domain VV1_RS07345 PF01494 FAD binding domain VV1_RS07360 PF01571 Aminomethyltransferase folate-binding domain VV1_RS07365 PF03937 Flavinator of succinate dehydrogenase VV1_RS07375 PF02910 Fumarate reductase flavoprotein C-term VV1_RS07375 PF00890 FAD binding domain VV1_RS07380 PF04542 Sigma-70 region 2 VV1_RS07380 PF08281 Sigma-70, region 4 VV1_RS07385 PF03872 Anti sigma-E protein RseA, N-terminal domain VV1_RS07385 PF03873 Anti sigma-E protein RseA, C-terminal domain VV1_RS07390 PF03888 MucB/RseB N-terminal domain VV1_RS07390 PF17188 MucB/RseB C-terminal domain VV1_RS07400 PF00009 Elongation factor Tu GTP binding domain VV1_RS07400 PF00679 Elongation factor G C-terminus VV1_RS07400 PF03144 Elongation factor Tu domain 2 VV1_RS07400 PF06421 GTP-binding protein LepA C-terminus VV1_RS07405 PF10502 Signal peptidase, peptidase S26 VV1_RS07410 PF00035 Double-stranded RNA binding motif VV1_RS07410 PF14622 Ribonuclease-III-like VV1_RS07415 PF07650 KH domain VV1_RS07415 PF01926 50S ribosome-binding GTPase VV1_RS07420 PF02565 Recombination protein O C terminal VV1_RS07420 PF11967 Recombination protein O N terminal VV1_RS07425 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VV1_RS07430 PF01648 4'-phosphopantetheinyl transferase superfamily VV1_RS07445 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS07445 PF00563 EAL domain VV1_RS07450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV1_RS07450 PF00672 HAMP domain VV1_RS07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS07450 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS07450 PF01627 Hpt domain VV1_RS07450 PF00072 Response regulator receiver domain VV1_RS07455 PF01938 TRAM domain VV1_RS07455 PF05958 tRNA (Uracil-5-)-methyltransferase VV1_RS07460 PF04607 Region found in RelA / SpoT proteins VV1_RS07460 PF02824 TGS domain VV1_RS07460 PF13291 ACT domain VV1_RS07465 PF03819 MazG nucleotide pyrophosphohydrolase domain VV1_RS07470 PF06418 CTP synthase N-terminus VV1_RS07470 PF00117 Glutamine amidotransferase class-I VV1_RS07475 PF03952 Enolase, N-terminal domain VV1_RS07475 PF00113 Enolase, C-terminal TIM barrel domain VV1_RS07480 PF04977 Septum formation initiator VV1_RS07485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VV1_RS07490 PF02542 YgbB family VV1_RS07495 PF01142 tRNA pseudouridine synthase D (TruD) VV1_RS07500 PF01975 Survival protein SurE VV1_RS07510 PF01551 Peptidase family M23 VV1_RS07510 PF01476 LysM domain VV1_RS07515 PF04539 Sigma-70 region 3 VV1_RS07515 PF04542 Sigma-70 region 2 VV1_RS07515 PF04545 Sigma-70, region 4 VV1_RS07515 PF00140 Sigma-70 factor, region 1.2 VV1_RS07520 PF01624 MutS domain I VV1_RS07520 PF05188 MutS domain II VV1_RS07520 PF05192 MutS domain III VV1_RS07520 PF05190 MutS family domain IV VV1_RS07520 PF00488 MutS domain V VV1_RS07525 PF02464 Competence-damaged protein VV1_RS07530 PF00154 recA bacterial DNA recombination protein VV1_RS07535 PF02631 RecX family VV1_RS07540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VV1_RS07540 PF01411 tRNA synthetases class II (A) VV1_RS07540 PF02272 DHHA1 domain VV1_RS07550 PF02599 Global regulator protein family VV1_RS07595 PF04277 Oxaloacetate decarboxylase, gamma chain VV1_RS07600 PF02436 Conserved carboxylase domain VV1_RS07600 PF00364 Biotin-requiring enzyme VV1_RS07600 PF00682 HMGL-like VV1_RS07605 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VV1_RS07610 PF08240 Alcohol dehydrogenase GroES-like domain VV1_RS07610 PF00107 Zinc-binding dehydrogenase VV1_RS07615 PF09335 SNARE associated Golgi protein VV1_RS07620 PF05193 Peptidase M16 inactive domain VV1_RS07620 PF00675 Insulinase (Peptidase family M16) VV1_RS07625 PF04262 Glutamate-cysteine ligase VV1_RS07635 PF02664 S-Ribosylhomocysteinase (LuxS) VV1_RS07640 PF00571 CBS domain VV1_RS07640 PF03471 Transporter associated domain VV1_RS07640 PF01595 Cyclin M transmembrane N-terminal domain VV1_RS07645 PF01578 Cytochrome C assembly protein VV1_RS07650 PF00448 SRP54-type protein, GTPase domain VV1_RS07650 PF02978 Signal peptide binding domain VV1_RS07650 PF02881 SRP54-type protein, helical bundle domain VV1_RS07655 PF00886 Ribosomal protein S16 VV1_RS07660 PF05239 PRC-barrel domain VV1_RS07660 PF01782 RimM N-terminal domain VV1_RS07665 PF01746 tRNA (Guanine-1)-methyltransferase VV1_RS07670 PF01245 Ribosomal protein L19 VV1_RS07675 PF03884 DNA gyrase inhibitor YacG VV1_RS07680 PF07072 Cell division protein VV1_RS07685 PF01121 Dephospho-CoA kinase VV1_RS07690 PF01478 Type IV leader peptidase family VV1_RS07690 PF06750 Bacterial Peptidase A24 N-terminal domain VV1_RS07695 PF00482 Type II secretion system (T2SS), protein F VV1_RS07700 PF00437 Type II/IV secretion system protein VV1_RS07700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VV1_RS07705 PF07963 Prokaryotic N-terminal methylation motif VV1_RS07705 PF00114 Pilin (bacterial filament) VV1_RS07710 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VV1_RS07710 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VV1_RS07715 PF01510 N-acetylmuramoyl-L-alanine amidase VV1_RS07720 PF07729 FCD domain VV1_RS07720 PF00392 Bacterial regulatory proteins, gntR family VV1_RS07725 PF17831 Pyruvate dehydrogenase E1 component middle domain VV1_RS07725 PF00456 Transketolase, thiamine diphosphate binding domain VV1_RS07730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VV1_RS07730 PF02817 e3 binding domain VV1_RS07730 PF00364 Biotin-requiring enzyme VV1_RS07735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV1_RS07735 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS07740 PF00440 Bacterial regulatory proteins, tetR family VV1_RS07745 PF00156 Phosphoribosyl transferase domain VV1_RS07750 PF00484 Carbonic anhydrase VV1_RS07755 PF01740 STAS domain VV1_RS07755 PF00916 Sulfate permease family VV1_RS07760 PF00005 ABC transporter VV1_RS07765 PF01061 ABC-2 type transporter VV1_RS07770 PF02569 Pantoate-beta-alanine ligase VV1_RS07775 PF02548 Ketopantoate hydroxymethyltransferase VV1_RS07780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VV1_RS07785 PF01743 Poly A polymerase head domain VV1_RS07785 PF12626 Polymerase A arginine-rich C-terminus VV1_RS07785 PF12627 Probable RNA and SrmB- binding site of polymerase A VV1_RS07790 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV1_RS07795 PF01258 Prokaryotic dksA/traR C4-type zinc finger VV1_RS07800 PF03749 Sugar fermentation stimulation protein RE domain VV1_RS07800 PF17746 SfsA N-terminal OB domain VV1_RS07805 PF00270 DEAD/DEAH box helicase VV1_RS07805 PF04408 Helicase associated domain (HA2) VV1_RS07805 PF00271 Helicase conserved C-terminal domain VV1_RS07805 PF08482 ATP-dependent helicase C-terminal VV1_RS07810 PF00912 Transglycosylase VV1_RS07810 PF14814 Bifunctional transglycosylase second domain VV1_RS07810 PF00905 Penicillin binding protein transpeptidase domain VV1_RS07815 PF01734 Patatin-like phospholipase VV1_RS07820 PF11791 Aconitate B N-terminal domain VV1_RS07820 PF00330 Aconitase family (aconitate hydratase) VV1_RS07820 PF06434 Aconitate hydratase 2 N-terminus VV1_RS07825 PF02595 Glycerate kinase family VV1_RS07830 PF02447 GntP family permease VV1_RS07835 PF13556 PucR C-terminal helix-turn-helix domain VV1_RS07835 PF05651 Putative sugar diacid recognition VV1_RS07835 PF17853 GGDEF-like domain VV1_RS07840 PF06062 Uncharacterised protein family (UPF0231) VV1_RS07845 PF00543 Nitrogen regulatory protein P-II VV1_RS07850 PF00909 Ammonium Transporter Family VV1_RS07855 PF13416 Bacterial extracellular solute-binding protein VV1_RS07865 PF08402 TOBE domain VV1_RS07865 PF00005 ABC transporter VV1_RS07870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV1_RS07870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV1_RS07870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV1_RS07870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV1_RS07875 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VV1_RS07875 PF06165 Glycosyltransferase family 36 VV1_RS07880 PF00728 Glycosyl hydrolase family 20, catalytic domain VV1_RS07880 PF02838 Glycosyl hydrolase family 20, domain 2 VV1_RS07885 PF01869 BadF/BadG/BcrA/BcrD ATPase family VV1_RS07895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS07895 PF00005 ABC transporter VV1_RS07900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS07900 PF00005 ABC transporter VV1_RS07905 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS07905 PF12911 N-terminal TM domain of oligopeptide transport permease C VV1_RS07910 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS07915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV1_RS07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS07920 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS07920 PF09308 LuxQ, periplasmic VV1_RS07920 PF00072 Response regulator receiver domain VV1_RS07925 PF08468 Methyltransferase small domain N-terminal VV1_RS07925 PF05175 Methyltransferase small domain VV1_RS07930 PF01594 AI-2E family transporter VV1_RS07935 PF00202 Aminotransferase class-III VV1_RS07940 PF01521 Iron-sulphur cluster biosynthesis VV1_RS07945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV1_RS07950 PF00873 AcrB/AcrD/AcrF family VV1_RS07955 PF04225 Opacity-associated protein A LysM-like domain VV1_RS07955 PF01551 Peptidase family M23 VV1_RS07960 PF00579 tRNA synthetases class I (W and Y) VV1_RS07965 PF04304 Protein of unknown function (DUF454) VV1_RS07970 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VV1_RS07975 PF13609 Gram-negative porin VV1_RS07985 PF01272 Transcription elongation factor, GreA/GreB, C-term VV1_RS07985 PF03449 Transcription elongation factor, N-terminal VV1_RS07990 PF01985 CRS1 / YhbY (CRM) domain VV1_RS07995 PF01728 FtsJ-like methyltransferase VV1_RS08000 PF00004 ATPase family associated with various cellular activities (AAA) VV1_RS08000 PF06480 FtsH Extracellular VV1_RS08000 PF17862 AAA+ lid domain VV1_RS08000 PF01434 Peptidase family M41 VV1_RS08005 PF00809 Pterin binding enzyme VV1_RS08010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV1_RS08010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV1_RS08010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV1_RS08010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV1_RS08015 PF03840 Preprotein translocase SecG subunit VV1_RS08030 PF17384 RimP C-terminal SH3 domain VV1_RS08030 PF02576 RimP N-terminal domain VV1_RS08035 PF08529 NusA N-terminal domain VV1_RS08035 PF13184 NusA-like KH domain VV1_RS08035 PF00575 S1 RNA binding domain VV1_RS08040 PF11987 Translation-initiation factor 2 VV1_RS08040 PF08364 Bacterial translation initiation factor IF-2 associated region VV1_RS08040 PF00009 Elongation factor Tu GTP binding domain VV1_RS08040 PF04760 Translation initiation factor IF-2, N-terminal region VV1_RS08045 PF02033 Ribosome-binding factor A VV1_RS08050 PF01509 TruB family pseudouridylate synthase (N terminal domain) VV1_RS08050 PF16198 tRNA pseudouridylate synthase B C-terminal domain VV1_RS08050 PF09157 Pseudouridine synthase II TruB, C-terminal VV1_RS08055 PF13006 Insertion element 4 transposase N-terminal VV1_RS08055 PF01609 Transposase DDE domain VV1_RS08060 PF00312 Ribosomal protein S15 VV1_RS08090 PF00575 S1 RNA binding domain VV1_RS08090 PF03725 3' exoribonuclease family, domain 2 VV1_RS08090 PF01138 3' exoribonuclease family, domain 1 VV1_RS08090 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VV1_RS08090 PF00013 KH domain VV1_RS08095 PF07719 Tetratricopeptide repeat VV1_RS08095 PF13181 Tetratricopeptide repeat VV1_RS08105 PF01554 MatE VV1_RS08110 PF01136 Peptidase family U32 VV1_RS08115 PF01136 Peptidase family U32 VV1_RS08120 PF00563 EAL domain VV1_RS08120 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS08120 PF03707 Bacterial signalling protein N terminal repeat VV1_RS08125 PF02036 SCP-2 sterol transfer family VV1_RS08130 PF13508 Acetyltransferase (GNAT) domain VV1_RS08140 PF00583 Acetyltransferase (GNAT) family VV1_RS08145 PF00563 EAL domain VV1_RS08145 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS08145 PF03707 Bacterial signalling protein N terminal repeat VV1_RS08150 PF08448 PAS fold VV1_RS08150 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS08155 PF16658 Class II release factor RF3, C-terminal domain VV1_RS08155 PF03144 Elongation factor Tu domain 2 VV1_RS08155 PF00009 Elongation factor Tu GTP binding domain VV1_RS08160 PF01026 TatD related DNase VV1_RS08165 PF01773 Na+ dependent nucleoside transporter N-terminus VV1_RS08165 PF07670 Nucleoside recognition VV1_RS08165 PF07662 Na+ dependent nucleoside transporter C-terminus VV1_RS08170 PF01791 DeoC/LacD family aldolase VV1_RS08175 PF00591 Glycosyl transferase family, a/b domain VV1_RS08175 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VV1_RS08175 PF02885 Glycosyl transferase family, helical bundle domain VV1_RS08180 PF01676 Metalloenzyme superfamily VV1_RS08185 PF01048 Phosphorylase superfamily VV1_RS08195 PF18429 Domain of unknown function (DUF5609) VV1_RS08205 PF18073 Rubredoxin metal binding domain VV1_RS08210 PF03707 Bacterial signalling protein N terminal repeat VV1_RS08210 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS08210 PF00563 EAL domain VV1_RS08225 PF14492 Elongation Factor G, domain II VV1_RS08225 PF03764 Elongation factor G, domain IV VV1_RS08225 PF00009 Elongation factor Tu GTP binding domain VV1_RS08225 PF03144 Elongation factor Tu domain 2 VV1_RS08225 PF00679 Elongation factor G C-terminus VV1_RS08230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS08230 PF03466 LysR substrate binding domain VV1_RS08240 PF00501 AMP-binding enzyme VV1_RS08245 PF02311 AraC-like ligand binding domain VV1_RS08245 PF12833 Helix-turn-helix domain VV1_RS08275 PF04972 BON domain VV1_RS08275 PF00263 Bacterial type II and III secretion system protein VV1_RS08275 PF13629 Pilus formation protein N terminal region VV1_RS08305 PF00437 Type II/IV secretion system protein VV1_RS08325 PF02417 Chromate transporter VV1_RS08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS08330 PF03466 LysR substrate binding domain VV1_RS08340 PF01204 Trehalase VV1_RS08345 PF13520 Amino acid permease VV1_RS08350 PF13520 Amino acid permease VV1_RS08355 PF04074 YhcH/YjgK/YiaL VV1_RS08360 PF02929 Beta galactosidase small chain VV1_RS08360 PF16353 Domain of unknown function(DUF4981) VV1_RS08360 PF00703 Glycosyl hydrolases family 2 VV1_RS08360 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VV1_RS08360 PF02837 Glycosyl hydrolases family 2, sugar binding domain VV1_RS08370 PF00356 Bacterial regulatory proteins, lacI family VV1_RS08375 PF16363 GDP-mannose 4,6 dehydratase VV1_RS08380 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VV1_RS08380 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VV1_RS08385 PF08544 GHMP kinases C terminal VV1_RS08385 PF10509 Galactokinase galactose-binding signature VV1_RS08385 PF00288 GHMP kinases N terminal domain VV1_RS08390 PF01263 Aldose 1-epimerase VV1_RS08395 PF17200 Single Cache domain 2 VV1_RS08395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS08395 PF00672 HAMP domain VV1_RS08400 PF00356 Bacterial regulatory proteins, lacI family VV1_RS08405 PF01588 Putative tRNA binding domain VV1_RS08425 PF08443 RimK-like ATP-grasp domain VV1_RS08425 PF02080 TrkA-C domain VV1_RS08425 PF18030 RimK PreATP-grasp domain VV1_RS08435 PF01544 CorA-like Mg2+ transporter protein VV1_RS08440 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VV1_RS08440 PF01266 FAD dependent oxidoreductase VV1_RS08445 PF00455 DeoR C terminal sensor domain VV1_RS08445 PF08220 DeoR-like helix-turn-helix domain VV1_RS08450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VV1_RS08450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VV1_RS08455 PF00230 Major intrinsic protein VV1_RS08460 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VV1_RS08460 PF14602 Hexapeptide repeat of succinyl-transferase VV1_RS08465 PF07130 YebG protein VV1_RS08470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS08470 PF03466 LysR substrate binding domain VV1_RS08480 PF11893 Domain of unknown function (DUF3413) VV1_RS08480 PF00884 Sulfatase VV1_RS08485 PF17946 RecC C-terminal domain VV1_RS08490 PF13361 UvrD-like helicase C-terminal domain VV1_RS08490 PF00580 UvrD/REP helicase N-terminal domain VV1_RS08490 PF12705 PD-(D/E)XK nuclease superfamily VV1_RS08495 PF13538 UvrD-like helicase C-terminal domain VV1_RS08505 PF00583 Acetyltransferase (GNAT) family VV1_RS08505 PF00696 Amino acid kinase family VV1_RS08515 PF06725 3D domain VV1_RS08515 PF03562 MltA specific insert domain VV1_RS08520 PF00899 ThiF family VV1_RS08525 PF02657 Fe-S metabolism associated domain VV1_RS08530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS08545 PF00266 Aminotransferase class-V VV1_RS08550 PF01965 DJ-1/PfpI family VV1_RS08555 PF08546 Ketopantoate reductase PanE/ApbA C terminal VV1_RS08555 PF02558 Ketopantoate reductase PanE/ApbA VV1_RS08560 PF03502 Nucleoside-specific channel-forming protein, Tsx VV1_RS08570 PF04542 Sigma-70 region 2 VV1_RS08570 PF04545 Sigma-70, region 4 VV1_RS08580 PF07690 Major Facilitator Superfamily VV1_RS08585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VV1_RS08595 PF05175 Methyltransferase small domain VV1_RS08600 PF01722 BolA-like protein VV1_RS08605 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VV1_RS08605 PF11973 NQRA C-terminal domain VV1_RS08610 PF03116 NQR2, RnfD, RnfE family VV1_RS08615 PF04205 FMN-binding domain VV1_RS08620 PF02508 Rnf-Nqr subunit, membrane protein VV1_RS08625 PF02508 Rnf-Nqr subunit, membrane protein VV1_RS08630 PF00970 Oxidoreductase FAD-binding domain VV1_RS08630 PF00111 2Fe-2S iron-sulfur cluster binding domain VV1_RS08630 PF00175 Oxidoreductase NAD-binding domain VV1_RS08635 PF02424 ApbE family VV1_RS08645 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS08645 PF00072 Response regulator receiver domain VV1_RS08650 PF00817 impB/mucB/samB family VV1_RS08650 PF11799 impB/mucB/samB family C-terminal domain VV1_RS08655 PF00271 Helicase conserved C-terminal domain VV1_RS08655 PF09382 RQC domain VV1_RS08655 PF16124 RecQ zinc-binding VV1_RS08655 PF00270 DEAD/DEAH box helicase VV1_RS08655 PF00570 HRDC domain VV1_RS08665 PF00704 Glycosyl hydrolases family 18 VV1_RS08665 PF00041 Fibronectin type III domain VV1_RS08670 PF00209 Sodium:neurotransmitter symporter family VV1_RS08680 PF06786 Uncharacterised protein family (UPF0253) VV1_RS08690 PF03129 Anticodon binding domain VV1_RS08690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV1_RS08690 PF04073 Aminoacyl-tRNA editing domain VV1_RS08695 PF01980 tRNA-methyltransferase O VV1_RS08695 PF18389 TrmO C-terminal domain VV1_RS08700 PF01197 Ribosomal protein L31 VV1_RS08705 PF03806 AbgT putative transporter family VV1_RS08725 PF01370 NAD dependent epimerase/dehydratase family VV1_RS08735 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VV1_RS08765 PF04287 tRNA pseudouridine synthase C VV1_RS08770 PF00849 RNA pseudouridylate synthase VV1_RS08775 PF11944 Protein of unknown function (DUF3461) VV1_RS08780 PF08335 GlnD PII-uridylyltransferase VV1_RS08780 PF01966 HD domain VV1_RS08780 PF01909 Nucleotidyltransferase domain VV1_RS08785 PF00557 Metallopeptidase family M24 VV1_RS08790 PF00318 Ribosomal protein S2 VV1_RS08795 PF00889 Elongation factor TS VV1_RS08800 PF00696 Amino acid kinase family VV1_RS08810 PF01255 Putative undecaprenyl diphosphate synthase VV1_RS08820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VV1_RS08820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VV1_RS08820 PF13288 DXP reductoisomerase C-terminal domain VV1_RS08825 PF02163 Peptidase family M50 VV1_RS08825 PF17820 PDZ domain VV1_RS08830 PF01103 Surface antigen VV1_RS08830 PF07244 Surface antigen variable number repeat VV1_RS08835 PF03938 Outer membrane protein (OmpH-like) VV1_RS08840 PF00132 Bacterial transferase hexapeptide (six repeats) VV1_RS08840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VV1_RS08845 PF07977 FabA-like domain VV1_RS08850 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VV1_RS08850 PF00132 Bacterial transferase hexapeptide (six repeats) VV1_RS08855 PF02684 Lipid-A-disaccharide synthetase VV1_RS08860 PF01351 Ribonuclease HII VV1_RS08865 PF14579 Helix-hairpin-helix motif VV1_RS08865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VV1_RS08865 PF07733 Bacterial DNA polymerase III alpha NTPase domain VV1_RS08865 PF02811 PHP domain VV1_RS08865 PF01336 OB-fold nucleic acid binding domain VV1_RS08870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VV1_RS08875 PF09179 TilS substrate binding domain VV1_RS08875 PF01171 PP-loop family VV1_RS08875 PF11734 TilS substrate C-terminal domain VV1_RS08880 PF00034 Cytochrome c VV1_RS08885 PF00543 Nitrogen regulatory protein P-II VV1_RS08890 PF03372 Endonuclease/Exonuclease/phosphatase family VV1_RS08900 PF01476 LysM domain VV1_RS08900 PF01464 Transglycosylase SLT domain VV1_RS08905 PF16123 Hydroxyacylglutathione hydrolase C-terminus VV1_RS08905 PF00753 Metallo-beta-lactamase superfamily VV1_RS08910 PF08241 Methyltransferase domain VV1_RS08915 PF00075 RNase H VV1_RS08920 PF00929 Exonuclease VV1_RS08930 PF02525 Flavodoxin-like fold VV1_RS08935 PF02254 TrkA-N domain VV1_RS08935 PF00999 Sodium/hydrogen exchanger family VV1_RS08960 PF09317 Domain of unknown function (DUF1974) VV1_RS08960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV1_RS08960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV1_RS08960 PF02770 Acyl-CoA dehydrogenase, middle domain VV1_RS08965 PF13580 SIS domain VV1_RS08970 PF13230 Glutamine amidotransferases class-II VV1_RS08975 PF00551 Formyl transferase VV1_RS08980 PF02769 AIR synthase related protein, C-terminal domain VV1_RS08980 PF00586 AIR synthase related protein, N-terminal domain VV1_RS08990 PF00860 Permease family VV1_RS09005 PF03358 NADPH-dependent FMN reductase VV1_RS09010 PF03960 ArsC family VV1_RS09015 PF13181 Tetratricopeptide repeat VV1_RS09015 PF01435 Peptidase family M48 VV1_RS09025 PF01594 AI-2E family transporter VV1_RS09030 PF00578 AhpC/TSA family VV1_RS09035 PF01842 ACT domain VV1_RS09040 PF00701 Dihydrodipicolinate synthetase family VV1_RS09045 PF06804 NlpB/DapX lipoprotein VV1_RS09060 PF07687 Peptidase dimerisation domain VV1_RS09060 PF01546 Peptidase family M20/M25/M40 VV1_RS09065 PF03960 ArsC family VV1_RS09095 PF04261 Dyp-type peroxidase family VV1_RS09100 PF00669 Bacterial flagellin N-terminal helical region VV1_RS09100 PF07196 Flagellin hook IN motif VV1_RS09100 PF00700 Bacterial flagellin C-terminal helical region VV1_RS09105 PF00700 Bacterial flagellin C-terminal helical region VV1_RS09105 PF07196 Flagellin hook IN motif VV1_RS09105 PF00669 Bacterial flagellin N-terminal helical region VV1_RS09110 PF00700 Bacterial flagellin C-terminal helical region VV1_RS09110 PF00669 Bacterial flagellin N-terminal helical region VV1_RS09110 PF07196 Flagellin hook IN motif VV1_RS09115 PF03646 FlaG protein VV1_RS09120 PF07195 Flagellar hook-associated protein 2 C-terminus VV1_RS09120 PF07196 Flagellin hook IN motif VV1_RS09120 PF02465 Flagellar hook-associated protein 2 N-terminus VV1_RS09130 PF02561 Flagellar protein FliS VV1_RS09135 PF02954 Bacterial regulatory protein, Fis family VV1_RS09135 PF00158 Sigma-54 interaction domain VV1_RS09135 PF06490 Flagellar regulatory protein FleQ VV1_RS09140 PF13188 PAS domain VV1_RS09140 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS09145 PF00072 Response regulator receiver domain VV1_RS09145 PF02954 Bacterial regulatory protein, Fis family VV1_RS09145 PF00158 Sigma-54 interaction domain VV1_RS09150 PF02049 Flagellar hook-basal body complex protein FliE VV1_RS09155 PF08345 Flagellar M-ring protein C-terminal VV1_RS09155 PF01514 Secretory protein of YscJ/FliF family VV1_RS09160 PF14842 FliG N-terminal domain VV1_RS09160 PF14841 FliG middle domain VV1_RS09160 PF01706 FliG C-terminal domain VV1_RS09170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV1_RS09170 PF18269 T3SS EscN ATPase C-terminal domain VV1_RS09190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VV1_RS09190 PF02154 Flagellar motor switch protein FliM VV1_RS09195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VV1_RS09200 PF04347 Flagellar biosynthesis protein, FliO VV1_RS09205 PF00813 FliP family VV1_RS09210 PF01313 Bacterial export proteins, family 3 VV1_RS09215 PF01311 Bacterial export proteins, family 1 VV1_RS09220 PF01312 FlhB HrpN YscU SpaS Family VV1_RS09225 PF00771 FHIPEP family VV1_RS09230 PF00448 SRP54-type protein, GTPase domain VV1_RS09235 PF10609 NUBPL iron-transfer P-loop NTPase VV1_RS09240 PF04539 Sigma-70 region 3 VV1_RS09240 PF04545 Sigma-70, region 4 VV1_RS09240 PF04542 Sigma-70 region 2 VV1_RS09245 PF00072 Response regulator receiver domain VV1_RS09250 PF04344 Chemotaxis phosphatase, CheZ VV1_RS09255 PF02895 Signal transducing histidine kinase, homodimeric domain VV1_RS09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS09255 PF01627 Hpt domain VV1_RS09255 PF00072 Response regulator receiver domain VV1_RS09255 PF01584 CheW-like domain VV1_RS09260 PF01339 CheB methylesterase VV1_RS09260 PF00072 Response regulator receiver domain VV1_RS09265 PF13614 AAA domain VV1_RS09275 PF01584 CheW-like domain VV1_RS09285 PF00005 ABC transporter VV1_RS09290 PF03379 CcmB protein VV1_RS09295 PF01578 Cytochrome C assembly protein VV1_RS09300 PF04995 Heme exporter protein D (CcmD) VV1_RS09305 PF03100 CcmE VV1_RS09310 PF01578 Cytochrome C assembly protein VV1_RS09310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VV1_RS09315 PF08534 Redoxin VV1_RS09320 PF03918 Cytochrome C biogenesis protein VV1_RS09325 PF03918 Cytochrome C biogenesis protein VV1_RS09330 PF04333 MlaA lipoprotein VV1_RS09335 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV1_RS09340 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV1_RS09350 PF04542 Sigma-70 region 2 VV1_RS09350 PF08281 Sigma-70, region 4 VV1_RS09355 PF00108 Thiolase, N-terminal domain VV1_RS09355 PF02803 Thiolase, C-terminal domain VV1_RS09360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VV1_RS09360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VV1_RS09360 PF00378 Enoyl-CoA hydratase/isomerase VV1_RS09365 PF05193 Peptidase M16 inactive domain VV1_RS09365 PF00675 Insulinase (Peptidase family M16) VV1_RS09370 PF00300 Histidine phosphatase superfamily (branch 1) VV1_RS09375 PF01713 Smr domain VV1_RS09380 PF05175 Methyltransferase small domain VV1_RS09385 PF01264 Chorismate synthase VV1_RS09390 PF03458 UPF0126 domain VV1_RS09395 PF04315 Elongation factor P hydroxylase VV1_RS09400 PF08891 YfcL protein VV1_RS09405 PF01266 FAD dependent oxidoreductase VV1_RS09405 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VV1_RS09410 PF02801 Beta-ketoacyl synthase, C-terminal domain VV1_RS09410 PF00109 Beta-ketoacyl synthase, N-terminal domain VV1_RS09415 PF11890 Domain of unknown function (DUF3410) VV1_RS09415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV1_RS09415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV1_RS09420 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV1_RS09420 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV1_RS09430 PF01416 tRNA pseudouridine synthase VV1_RS09435 PF17848 Acetyl-coA carboxylase zinc finger domain VV1_RS09435 PF01039 Carboxyl transferase domain VV1_RS09440 PF02875 Mur ligase family, glutamate ligase domain VV1_RS09440 PF08245 Mur ligase middle domain VV1_RS09445 PF05036 Sporulation related domain VV1_RS09450 PF02674 Colicin V production protein VV1_RS09455 PF00156 Phosphoribosyl transferase domain VV1_RS09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS09460 PF03466 LysR substrate binding domain VV1_RS09465 PF00072 Response regulator receiver domain VV1_RS09475 PF00156 Phosphoribosyl transferase domain VV1_RS09480 PF12169 DNA polymerase III subunits gamma and tau domain III VV1_RS09480 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VV1_RS09480 PF12170 DNA polymerase III tau subunit V interacting with alpha VV1_RS09485 PF02575 YbaB/EbfC DNA-binding family VV1_RS09490 PF02132 RecR protein VV1_RS09490 PF13662 Toprim domain VV1_RS09505 PF00672 HAMP domain VV1_RS09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS09505 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS09510 PF00486 Transcriptional regulatory protein, C terminal VV1_RS09510 PF00072 Response regulator receiver domain VV1_RS09515 PF00230 Major intrinsic protein VV1_RS09520 PF03692 Putative zinc- or iron-chelating domain VV1_RS09525 PF03692 Putative zinc- or iron-chelating domain VV1_RS09535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV1_RS09545 PF00245 Alkaline phosphatase VV1_RS09560 PF13847 Methyltransferase domain VV1_RS09565 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VV1_RS09565 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VV1_RS09600 PF01420 Type I restriction modification DNA specificity domain VV1_RS09605 PF12161 HsdM N-terminal domain VV1_RS09605 PF02384 N-6 DNA Methylase VV1_RS09630 PF00271 Helicase conserved C-terminal domain VV1_RS09630 PF04851 Type III restriction enzyme, res subunit VV1_RS09630 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VV1_RS09630 PF08463 EcoEI R protein C-terminal VV1_RS09675 PF01381 Helix-turn-helix VV1_RS09680 PF13657 HipA N-terminal domain VV1_RS09680 PF07804 HipA-like C-terminal domain VV1_RS09690 PF01769 Divalent cation transporter VV1_RS09690 PF00571 CBS domain VV1_RS09690 PF03448 MgtE intracellular N domain VV1_RS09695 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS09705 PF02743 Cache domain VV1_RS09705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS09705 PF00672 HAMP domain VV1_RS09710 PF18500 CadC C-terminal domain 1 VV1_RS09710 PF00486 Transcriptional regulatory protein, C terminal VV1_RS09715 PF13520 Amino acid permease VV1_RS09720 PF01276 Orn/Lys/Arg decarboxylase, major domain VV1_RS09720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VV1_RS09720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VV1_RS09725 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS09730 PF00571 CBS domain VV1_RS09730 PF01743 Poly A polymerase head domain VV1_RS09735 PF00403 Heavy-metal-associated domain VV1_RS09740 PF01048 Phosphorylase superfamily VV1_RS09750 PF00672 HAMP domain VV1_RS09750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS09755 PF01230 HIT domain VV1_RS09770 PF13036 Peptidoglycan-synthase activator LpoB VV1_RS09770 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VV1_RS09780 PF05728 Uncharacterised protein family (UPF0227) VV1_RS09785 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS09800 PF02559 CarD-like/TRCF domain VV1_RS09800 PF00270 DEAD/DEAH box helicase VV1_RS09800 PF03461 TRCF domain VV1_RS09800 PF17757 UvrB interaction domain VV1_RS09800 PF00271 Helicase conserved C-terminal domain VV1_RS09810 PF12704 MacB-like periplasmic core domain VV1_RS09810 PF02687 FtsX-like permease family VV1_RS09815 PF00005 ABC transporter VV1_RS09820 PF12704 MacB-like periplasmic core domain VV1_RS09820 PF02687 FtsX-like permease family VV1_RS09830 PF13567 Domain of unknown function (DUF4131) VV1_RS09830 PF03772 Competence protein VV1_RS09830 PF00753 Metallo-beta-lactamase superfamily VV1_RS09835 PF00005 ABC transporter VV1_RS09835 PF00664 ABC transporter transmembrane region VV1_RS09840 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VV1_RS09845 PF03966 Trm112p-like protein VV1_RS09850 PF02348 Cytidylyltransferase VV1_RS09855 PF17155 Gammaproteobacterial periplasmic sensor domain VV1_RS09855 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS09860 PF04293 SpoVR like protein VV1_RS09865 PF04285 Protein of unknown function (DUF444) VV1_RS09870 PF06798 PrkA serine protein kinase C-terminal domain VV1_RS09870 PF08298 PrkA AAA domain VV1_RS09875 PF03887 YfbU domain VV1_RS09885 PF04055 Radical SAM superfamily VV1_RS09890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS09890 PF00672 HAMP domain VV1_RS09900 PF01228 Glycine radical VV1_RS09900 PF02901 Pyruvate formate lyase-like VV1_RS09915 PF00005 ABC transporter VV1_RS09920 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV1_RS09925 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS09930 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS09940 PF03372 Endonuclease/Exonuclease/phosphatase family VV1_RS09945 PF00672 HAMP domain VV1_RS09945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS09945 PF02743 Cache domain VV1_RS09950 PF10689 Protein of unknown function (DUF2496) VV1_RS09955 PF07445 Primosomal replication protein priC VV1_RS09960 PF01925 Sulfite exporter TauE/SafE VV1_RS09965 PF06733 DEAD_2 VV1_RS09965 PF13307 Helicase C-terminal domain VV1_RS09970 PF13609 Gram-negative porin VV1_RS09975 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV1_RS09980 PF00849 RNA pseudouridylate synthase VV1_RS09985 PF03971 Monomeric isocitrate dehydrogenase VV1_RS09990 PF00313 'Cold-shock' DNA-binding domain VV1_RS09995 PF02617 ATP-dependent Clp protease adaptor protein ClpS VV1_RS10000 PF00004 ATPase family associated with various cellular activities (AAA) VV1_RS10000 PF07724 AAA domain (Cdc48 subfamily) VV1_RS10000 PF17871 AAA lid domain VV1_RS10000 PF02861 Clp amino terminal domain, pathogenicity island component VV1_RS10000 PF10431 C-terminal, D2-small domain, of ClpB protein VV1_RS10005 PF01176 Translation initiation factor 1A / IF-1 VV1_RS10010 PF04376 Arginine-tRNA-protein transferase, N terminus VV1_RS10010 PF04377 Arginine-tRNA-protein transferase, C terminus VV1_RS10015 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VV1_RS10025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VV1_RS10030 PF10692 Protein of unknown function (DUF2498) VV1_RS10035 PF01131 DNA topoisomerase VV1_RS10035 PF08272 Topoisomerase I zinc-ribbon-like VV1_RS10035 PF01751 Toprim domain VV1_RS10035 PF01396 Topoisomerase DNA binding C4 zinc finger VV1_RS10040 PF00483 Nucleotidyl transferase VV1_RS10045 PF08323 Starch synthase catalytic domain VV1_RS10045 PF00534 Glycosyl transferases group 1 VV1_RS10050 PF00561 alpha/beta hydrolase fold VV1_RS10065 PF04994 TfoX C-terminal domain VV1_RS10065 PF04993 TfoX N-terminal domain VV1_RS10070 PF00356 Bacterial regulatory proteins, lacI family VV1_RS10075 PF02613 Nitrate reductase delta subunit VV1_RS10080 PF00072 Response regulator receiver domain VV1_RS10080 PF00486 Transcriptional regulatory protein, C terminal VV1_RS10085 PF02698 DUF218 domain VV1_RS10090 PF13847 Methyltransferase domain VV1_RS10095 PF03882 MukF winged-helix domain VV1_RS10095 PF17193 MukF C-terminal domain VV1_RS10095 PF17192 MukF middle domain VV1_RS10100 PF04288 MukE-like family VV1_RS10105 PF16330 MukB hinge domain VV1_RS10105 PF04310 MukB N-terminal VV1_RS10110 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VV1_RS10110 PF12833 Helix-turn-helix domain VV1_RS10115 PF00171 Aldehyde dehydrogenase family VV1_RS10135 PF18030 RimK PreATP-grasp domain VV1_RS10135 PF08443 RimK-like ATP-grasp domain VV1_RS10140 PF08003 Protein of unknown function (DUF1698) VV1_RS10145 PF13649 Methyltransferase domain VV1_RS10155 PF00152 tRNA synthetases class II (D, K and N) VV1_RS10155 PF01336 OB-fold nucleic acid binding domain VV1_RS10155 PF02938 GAD domain VV1_RS10160 PF02075 Crossover junction endodeoxyribonuclease RuvC VV1_RS10165 PF02203 Tar ligand binding domain homologue VV1_RS10165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS10165 PF00672 HAMP domain VV1_RS10170 PF07499 RuvA, C-terminal domain VV1_RS10170 PF01330 RuvA N terminal domain VV1_RS10175 PF05496 Holliday junction DNA helicase RuvB P-loop domain VV1_RS10175 PF17864 RuvB AAA lid domain VV1_RS10175 PF05491 RuvB C-terminal winged helix domain VV1_RS10180 PF01654 Cytochrome bd terminal oxidase subunit I VV1_RS10185 PF02322 Cytochrome bd terminal oxidase subunit II VV1_RS10200 PF03061 Thioesterase superfamily VV1_RS10205 PF01618 MotA/TolQ/ExbB proton channel family VV1_RS10210 PF02472 Biopolymer transport protein ExbD/TolR VV1_RS10220 PF07676 WD40-like Beta Propeller Repeat VV1_RS10220 PF04052 TolB amino-terminal domain VV1_RS10225 PF00691 OmpA family VV1_RS10230 PF13174 Tetratricopeptide repeat VV1_RS10230 PF16331 TolA binding protein trimerisation VV1_RS10235 PF02445 Quinolinate synthetase A protein VV1_RS10245 PF03994 Domain of Unknown Function (DUF350) VV1_RS10255 PF03738 Glutathionylspermidine synthase preATP-grasp VV1_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS10265 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS10265 PF09308 LuxQ, periplasmic VV1_RS10265 PF00072 Response regulator receiver domain VV1_RS10270 PF06610 L-alanine exporter VV1_RS10345 PF04229 GrpB protein VV1_RS10360 PF13419 Haloacid dehalogenase-like hydrolase VV1_RS10365 PF00672 HAMP domain VV1_RS10365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS10365 PF02743 Cache domain VV1_RS10370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV1_RS10370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV1_RS10375 PF03741 Integral membrane protein TerC family VV1_RS10390 PF12833 Helix-turn-helix domain VV1_RS10390 PF02311 AraC-like ligand binding domain VV1_RS10395 PF01740 STAS domain VV1_RS10395 PF00916 Sulfate permease family VV1_RS10405 PF03707 Bacterial signalling protein N terminal repeat VV1_RS10405 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10405 PF00563 EAL domain VV1_RS10410 PF04055 Radical SAM superfamily VV1_RS10410 PF11842 Domain of unknown function (DUF3362) VV1_RS10410 PF08497 Radical SAM N-terminal VV1_RS10415 PF00563 EAL domain VV1_RS10415 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10415 PF03707 Bacterial signalling protein N terminal repeat VV1_RS10420 PF03707 Bacterial signalling protein N terminal repeat VV1_RS10420 PF00563 EAL domain VV1_RS10420 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10435 PF03466 LysR substrate binding domain VV1_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS10440 PF08267 Cobalamin-independent synthase, N-terminal domain VV1_RS10440 PF01717 Cobalamin-independent synthase, Catalytic domain VV1_RS10445 PF01515 Phosphate acetyl/butaryl transferase VV1_RS10445 PF07085 DRTGG domain VV1_RS10450 PF00871 Acetokinase family VV1_RS10455 PF04217 Protein of unknown function, DUF412 VV1_RS10465 PF02653 Branched-chain amino acid transport system / permease component VV1_RS10470 PF00005 ABC transporter VV1_RS10475 PF02903 Alpha amylase, N-terminal ig-like domain VV1_RS10475 PF00128 Alpha amylase, catalytic domain VV1_RS10480 PF00072 Response regulator receiver domain VV1_RS10480 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10485 PF01207 Dihydrouridine synthase (Dus) VV1_RS10490 PF02810 SEC-C motif VV1_RS10490 PF07517 SecA DEAD-like domain VV1_RS10490 PF01043 SecA preprotein cross-linking domain VV1_RS10490 PF07516 SecA Wing and Scaffold domain VV1_RS10495 PF02600 Disulfide bond formation protein DsbB VV1_RS10500 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VV1_RS10505 PF00392 Bacterial regulatory proteins, gntR family VV1_RS10505 PF07840 FadR C-terminal domain VV1_RS10510 PF00925 GTP cyclohydrolase II VV1_RS10515 PF01609 Transposase DDE domain VV1_RS10515 PF13006 Insertion element 4 transposase N-terminal VV1_RS10520 PF03480 Bacterial extracellular solute-binding protein, family 7 VV1_RS10530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV1_RS10535 PF17200 Single Cache domain 2 VV1_RS10535 PF07730 Histidine kinase VV1_RS10540 PF00072 Response regulator receiver domain VV1_RS10540 PF00196 Bacterial regulatory proteins, luxR family VV1_RS10545 PF01047 MarR family VV1_RS10550 PF02028 BCCT, betaine/carnitine/choline family transporter VV1_RS10555 PF02743 Cache domain VV1_RS10555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS10555 PF00672 HAMP domain VV1_RS10575 PF00155 Aminotransferase class I and II VV1_RS10580 PF00672 HAMP domain VV1_RS10580 PF01966 HD domain VV1_RS10595 PF00155 Aminotransferase class I and II VV1_RS10595 PF00392 Bacterial regulatory proteins, gntR family VV1_RS10605 PF01336 OB-fold nucleic acid binding domain VV1_RS10605 PF00152 tRNA synthetases class II (D, K and N) VV1_RS10610 PF00672 HAMP domain VV1_RS10610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS10610 PF17200 Single Cache domain 2 VV1_RS10615 PF01242 6-pyruvoyl tetrahydropterin synthase VV1_RS10625 PF00563 EAL domain VV1_RS10625 PF04940 Sensors of blue-light using FAD VV1_RS10630 PF03313 Serine dehydratase alpha chain VV1_RS10630 PF03315 Serine dehydratase beta chain VV1_RS10635 PF03222 Tryptophan/tyrosine permease family VV1_RS10640 PF00293 NUDIX domain VV1_RS10650 PF00072 Response regulator receiver domain VV1_RS10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS10650 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS10650 PF09308 LuxQ, periplasmic VV1_RS10660 PF00425 chorismate binding enzyme VV1_RS10660 PF04715 Anthranilate synthase component I, N terminal region VV1_RS10675 PF04317 YcjX-like family, DUF463 VV1_RS10680 PF05128 Domain of unknown function (DUF697) VV1_RS10685 PF00158 Sigma-54 interaction domain VV1_RS10685 PF13188 PAS domain VV1_RS10685 PF18024 Helix-turn-helix domain VV1_RS10690 PF13302 Acetyltransferase (GNAT) domain VV1_RS10705 PF00939 Sodium:sulfate symporter transmembrane region VV1_RS10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS10710 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS10710 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV1_RS10720 PF17158 Membrane-associated sensor, integral membrane domain VV1_RS10720 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10725 PF00563 EAL domain VV1_RS10725 PF05231 MASE1 VV1_RS10735 PF11871 Domain of unknown function (DUF3391) VV1_RS10735 PF01966 HD domain VV1_RS10740 PF13188 PAS domain VV1_RS10740 PF03707 Bacterial signalling protein N terminal repeat VV1_RS10740 PF00563 EAL domain VV1_RS10740 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10745 PF11230 Protein of unknown function (DUF3029) VV1_RS10750 PF04055 Radical SAM superfamily VV1_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS10755 PF03466 LysR substrate binding domain VV1_RS10770 PF01966 HD domain VV1_RS10775 PF01734 Patatin-like phospholipase VV1_RS10785 PF00781 Diacylglycerol kinase catalytic domain VV1_RS10790 PF03222 Tryptophan/tyrosine permease family VV1_RS10795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV1_RS10800 PF00072 Response regulator receiver domain VV1_RS10805 PF00210 Ferritin-like domain VV1_RS10820 PF00005 ABC transporter VV1_RS10820 PF00664 ABC transporter transmembrane region VV1_RS10825 PF00664 ABC transporter transmembrane region VV1_RS10825 PF00005 ABC transporter VV1_RS10830 PF01235 Sodium:alanine symporter family VV1_RS10835 PF02397 Bacterial sugar transferase VV1_RS10845 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VV1_RS10845 PF10531 SLBB domain VV1_RS10845 PF02563 Polysaccharide biosynthesis/export protein VV1_RS10870 PF13439 Glycosyltransferase Family 4 VV1_RS10870 PF00534 Glycosyl transferases group 1 VV1_RS10875 PF13439 Glycosyltransferase Family 4 VV1_RS10875 PF00534 Glycosyl transferases group 1 VV1_RS10890 PF07963 Prokaryotic N-terminal methylation motif VV1_RS10900 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10900 PF00563 EAL domain VV1_RS10900 PF03707 Bacterial signalling protein N terminal repeat VV1_RS10920 PF00012 Hsp70 protein VV1_RS10925 PF00012 Hsp70 protein VV1_RS10935 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS10935 PF17158 Membrane-associated sensor, integral membrane domain VV1_RS10955 PF06629 MltA-interacting protein MipA VV1_RS10985 PF13629 Pilus formation protein N terminal region VV1_RS10985 PF04972 BON domain VV1_RS10985 PF00263 Bacterial type II and III secretion system protein VV1_RS10995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VV1_RS11000 PF00437 Type II/IV secretion system protein VV1_RS11035 PF02525 Flavodoxin-like fold VV1_RS11045 PF04408 Helicase associated domain (HA2) VV1_RS11045 PF00271 Helicase conserved C-terminal domain VV1_RS11045 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VV1_RS11045 PF00270 DEAD/DEAH box helicase VV1_RS11045 PF11898 Domain of unknown function (DUF3418) VV1_RS11070 PF00561 alpha/beta hydrolase fold VV1_RS11075 PF03280 Proteobacterial lipase chaperone protein VV1_RS11080 PF07690 Major Facilitator Superfamily VV1_RS11095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS11095 PF12729 Four helix bundle sensory module for signal transduction VV1_RS11095 PF00672 HAMP domain VV1_RS11100 PF00491 Arginase family VV1_RS11105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VV1_RS11105 PF17944 Arginine decarboxylase C-terminal helical extension VV1_RS11105 PF17810 Arginine decarboxylase helical bundle domain VV1_RS11165 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS11165 PF00072 Response regulator receiver domain VV1_RS11170 PF01409 tRNA synthetases class II core domain (F) VV1_RS11170 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VV1_RS11175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VV1_RS11175 PF01588 Putative tRNA binding domain VV1_RS11175 PF03484 tRNA synthetase B5 domain VV1_RS11175 PF03483 B3/4 domain VV1_RS11175 PF03147 Ferredoxin-fold anticodon binding domain VV1_RS11180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VV1_RS11180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VV1_RS11195 PF00216 Bacterial DNA-binding protein VV1_RS11205 PF05724 Thiopurine S-methyltransferase (TPMT) VV1_RS11210 PF02222 ATP-grasp domain VV1_RS11215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV1_RS11215 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VV1_RS11230 PF13488 Glycine zipper VV1_RS11230 PF00691 OmpA family VV1_RS11245 PF02913 FAD linked oxidases, C-terminal domain VV1_RS11245 PF13183 4Fe-4S dicluster domain VV1_RS11245 PF01565 FAD binding domain VV1_RS11255 PF00089 Trypsin VV1_RS11265 PF00221 Aromatic amino acid lyase VV1_RS11270 PF01175 Urocanase Rossmann-like domain VV1_RS11270 PF17391 Urocanase N-terminal domain VV1_RS11270 PF17392 Urocanase C-terminal domain VV1_RS11275 PF00491 Arginase family VV1_RS11280 PF01979 Amidohydrolase family VV1_RS11285 PF07702 UTRA domain VV1_RS11285 PF00392 Bacterial regulatory proteins, gntR family VV1_RS11290 PF07070 SpoOM protein VV1_RS11300 PF02824 TGS domain VV1_RS11300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV1_RS11300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VV1_RS11300 PF03129 Anticodon binding domain VV1_RS11305 PF05198 Translation initiation factor IF-3, N-terminal domain VV1_RS11305 PF00707 Translation initiation factor IF-3, C-terminal domain VV1_RS11310 PF01632 Ribosomal protein L35 VV1_RS11315 PF00453 Ribosomal protein L20 VV1_RS11320 PF00589 Phage integrase family VV1_RS11320 PF13495 Phage integrase, N-terminal SAM-like domain VV1_RS11340 PF09905 DNA-binding protein VF530 VV1_RS11435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV1_RS11435 PF01872 RibD C-terminal domain VV1_RS11440 PF00132 Bacterial transferase hexapeptide (six repeats) VV1_RS11440 PF14602 Hexapeptide repeat of succinyl-transferase VV1_RS11440 PF12464 Maltose acetyltransferase VV1_RS11525 PF13302 Acetyltransferase (GNAT) domain VV1_RS11605 PF04471 Restriction endonuclease VV1_RS11605 PF14338 Mrr N-terminal domain VV1_RS11675 PF00589 Phage integrase family VV1_RS11690 PF05840 Bacteriophage replication gene A protein (GPA) VV1_RS11755 PF13302 Acetyltransferase (GNAT) domain VV1_RS11785 PF13302 Acetyltransferase (GNAT) domain VV1_RS11815 PF00877 NlpC/P60 family VV1_RS11880 PF13302 Acetyltransferase (GNAT) domain VV1_RS11925 PF13302 Acetyltransferase (GNAT) domain VV1_RS11935 PF01810 LysE type translocator VV1_RS11945 PF02824 TGS domain VV1_RS11945 PF04607 Region found in RelA / SpoT proteins VV1_RS11945 PF13291 ACT domain VV1_RS11970 PF13302 Acetyltransferase (GNAT) domain VV1_RS12035 PF13302 Acetyltransferase (GNAT) domain VV1_RS12045 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VV1_RS12050 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH VV1_RS12090 PF14552 Tautomerase enzyme VV1_RS12125 PF00583 Acetyltransferase (GNAT) family VV1_RS12125 PF13508 Acetyltransferase (GNAT) domain VV1_RS12180 PF13276 HTH-like domain VV1_RS12180 PF00665 Integrase core domain VV1_RS12180 PF13333 Integrase core domain VV1_RS12210 PF01554 MatE VV1_RS12215 PF00677 Lumazine binding domain VV1_RS12225 PF03881 Fructosamine kinase VV1_RS12230 PF00072 Response regulator receiver domain VV1_RS12230 PF01339 CheB methylesterase VV1_RS12235 PF05230 MASE2 domain VV1_RS12235 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS12245 PF00877 NlpC/P60 family VV1_RS12250 PF02743 Cache domain VV1_RS12250 PF00672 HAMP domain VV1_RS12250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS12260 PF03942 DTW domain VV1_RS12265 PF00480 ROK family VV1_RS12275 PF00994 Probable molybdopterin binding domain VV1_RS12275 PF03454 MoeA C-terminal region (domain IV) VV1_RS12275 PF03453 MoeA N-terminal region (domain I and II) VV1_RS12280 PF12804 MobA-like NTP transferase domain VV1_RS12285 PF00005 ABC transporter VV1_RS12285 PF08402 TOBE domain VV1_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS12295 PF12849 PBP superfamily domain VV1_RS12300 PF00158 Sigma-54 interaction domain VV1_RS12300 PF02954 Bacterial regulatory protein, Fis family VV1_RS12300 PF00072 Response regulator receiver domain VV1_RS12305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS12305 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS12305 PF00989 PAS fold VV1_RS12320 PF12848 ABC transporter VV1_RS12320 PF00005 ABC transporter VV1_RS12325 PF00672 HAMP domain VV1_RS12325 PF02743 Cache domain VV1_RS12325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS12330 PF02634 FdhD/NarQ family VV1_RS12360 PF00384 Molybdopterin oxidoreductase VV1_RS12360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VV1_RS12360 PF01568 Molydopterin dinucleotide binding domain VV1_RS12365 PF13247 4Fe-4S dicluster domain VV1_RS12395 PF00909 Ammonium Transporter Family VV1_RS12400 PF02146 Sir2 family VV1_RS12405 PF13416 Bacterial extracellular solute-binding protein VV1_RS12410 PF13416 Bacterial extracellular solute-binding protein VV1_RS12415 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS12420 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS12425 PF00005 ABC transporter VV1_RS12425 PF08402 TOBE domain VV1_RS12435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VV1_RS12445 PF01171 PP-loop family VV1_RS12450 PF00582 Universal stress protein family VV1_RS12455 PF00027 Cyclic nucleotide-binding domain VV1_RS12455 PF13545 Crp-like helix-turn-helix domain VV1_RS12470 PF00403 Heavy-metal-associated domain VV1_RS12480 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VV1_RS12480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VV1_RS12495 PF00115 Cytochrome C and Quinol oxidase polypeptide I VV1_RS12510 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS12510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS12510 PF09308 LuxQ, periplasmic VV1_RS12510 PF00072 Response regulator receiver domain VV1_RS12530 PF06303 MatP N-terminal domain VV1_RS12530 PF17414 MatP C-terminal ribbon-helix-helix domain VV1_RS12535 PF13654 AAA domain VV1_RS12535 PF05362 Lon protease (S16) C-terminal proteolytic domain VV1_RS12540 PF07977 FabA-like domain VV1_RS12545 PF04957 Ribosome modulation factor VV1_RS12555 PF00005 ABC transporter VV1_RS12555 PF16326 ABC transporter C-terminal domain VV1_RS12555 PF12848 ABC transporter VV1_RS12565 PF01170 Putative RNA methylase family UPF0020 VV1_RS12565 PF10672 S-adenosylmethionine-dependent methyltransferase VV1_RS12565 PF02926 THUMP domain VV1_RS12570 PF07126 Cell-division protein ZapC VV1_RS12575 PF01180 Dihydroorotate dehydrogenase VV1_RS12580 PF05088 Bacterial NAD-glutamate dehydrogenase VV1_RS12585 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VV1_RS12585 PF11940 Domain of unknown function (DUF3458) Ig-like fold VV1_RS12585 PF01433 Peptidase family M1 domain VV1_RS12595 PF11818 C-terminal domain of tail specific protease (DUF3340) VV1_RS12595 PF00595 PDZ domain VV1_RS12595 PF17804 Tail specific protease N-terminal domain VV1_RS12595 PF03572 Peptidase family S41 VV1_RS12600 PF17516 ProQ C-terminal domain VV1_RS12600 PF04352 ProQ/FINO family VV1_RS12605 PF13185 GAF domain VV1_RS12610 PF00664 ABC transporter transmembrane region VV1_RS12610 PF00005 ABC transporter VV1_RS12615 PF04403 Paraquat-inducible protein A VV1_RS12620 PF02470 MlaD protein VV1_RS12625 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VV1_RS12625 PF01189 16S rRNA methyltransferase RsmB/F VV1_RS12625 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VV1_RS12630 PF13509 S1 domain VV1_RS12630 PF17783 CvfB-like winged helix domain VV1_RS12645 PF00793 DAHP synthetase I family VV1_RS12650 PF04461 Protein of unknown function (DUF520) VV1_RS12655 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS12655 PF17158 Membrane-associated sensor, integral membrane domain VV1_RS12660 PF01068 ATP dependent DNA ligase domain VV1_RS12660 PF14743 DNA ligase OB-like domain VV1_RS12665 PF01740 STAS domain VV1_RS12675 PF02563 Polysaccharide biosynthesis/export protein VV1_RS12675 PF10531 SLBB domain VV1_RS12690 PF01627 Hpt domain VV1_RS12690 PF00672 HAMP domain VV1_RS12690 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS12690 PF00072 Response regulator receiver domain VV1_RS12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS12690 PF17149 Periplasmic sensor domain found in signal transduction proteins VV1_RS12695 PF02954 Bacterial regulatory protein, Fis family VV1_RS12695 PF00072 Response regulator receiver domain VV1_RS12695 PF00158 Sigma-54 interaction domain VV1_RS12740 PF00534 Glycosyl transferases group 1 VV1_RS12740 PF13439 Glycosyltransferase Family 4 VV1_RS12750 PF02397 Bacterial sugar transferase VV1_RS12780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VV1_RS12780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VV1_RS12785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VV1_RS12790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VV1_RS12790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VV1_RS12795 PF12431 Transcriptional regulator VV1_RS12795 PF00072 Response regulator receiver domain VV1_RS12800 PF00989 PAS fold VV1_RS12800 PF17203 Single cache domain 3 VV1_RS12800 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VV1_RS12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS12815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV1_RS12845 PF01235 Sodium:alanine symporter family VV1_RS12860 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VV1_RS12865 PF01553 Acyltransferase VV1_RS12870 PF12801 4Fe-4S binding domain VV1_RS12870 PF13237 4Fe-4S dicluster domain VV1_RS12875 PF12800 4Fe-4S binding domain VV1_RS12875 PF12838 4Fe-4S dicluster domain VV1_RS12880 PF14824 Sirohaem biosynthesis protein central VV1_RS12880 PF10414 Sirohaem synthase dimerisation region VV1_RS12880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV1_RS12885 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV1_RS12890 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS12895 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS12900 PF00005 ABC transporter VV1_RS12905 PF01027 Inhibitor of apoptosis-promoting Bax1 VV1_RS12915 PF04358 DsrC like protein VV1_RS12920 PF00708 Acylphosphatase VV1_RS12925 PF00672 HAMP domain VV1_RS12925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS12925 PF02743 Cache domain VV1_RS12930 PF17785 PUA-like domain VV1_RS12930 PF10672 S-adenosylmethionine-dependent methyltransferase VV1_RS12935 PF10672 S-adenosylmethionine-dependent methyltransferase VV1_RS12935 PF17785 PUA-like domain VV1_RS12960 PF17151 Periplasmic sensor domain VV1_RS12960 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS12965 PF06508 Queuosine biosynthesis protein QueC VV1_RS12970 PF04055 Radical SAM superfamily VV1_RS12980 PF00672 HAMP domain VV1_RS12980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS12980 PF02743 Cache domain VV1_RS12990 PF00089 Trypsin VV1_RS13010 PF13193 AMP-binding enzyme C-terminal domain VV1_RS13010 PF00501 AMP-binding enzyme VV1_RS13010 PF16177 Acetyl-coenzyme A synthetase N-terminus VV1_RS13015 PF04303 PrpF protein VV1_RS13020 PF00694 Aconitase C-terminal domain VV1_RS13020 PF00330 Aconitase family (aconitate hydratase) VV1_RS13025 PF00285 Citrate synthase, C-terminal domain VV1_RS13055 PF01970 Tripartite tricarboxylate transporter TctA family VV1_RS13080 PF00196 Bacterial regulatory proteins, luxR family VV1_RS13080 PF00072 Response regulator receiver domain VV1_RS13090 PF01925 Sulfite exporter TauE/SafE VV1_RS13095 PF02743 Cache domain VV1_RS13095 PF00672 HAMP domain VV1_RS13095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS13100 PF00072 Response regulator receiver domain VV1_RS13105 PF13416 Bacterial extracellular solute-binding protein VV1_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS13120 PF00005 ABC transporter VV1_RS13120 PF17912 MalK OB fold domain VV1_RS13125 PF08220 DeoR-like helix-turn-helix domain VV1_RS13125 PF00455 DeoR C terminal sensor domain VV1_RS13130 PF03009 Glycerophosphoryl diester phosphodiesterase family VV1_RS13135 PF00141 Peroxidase VV1_RS13145 PF00313 'Cold-shock' DNA-binding domain VV1_RS13150 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS13150 PF00072 Response regulator receiver domain VV1_RS13185 PF02798 Glutathione S-transferase, N-terminal domain VV1_RS13185 PF14497 Glutathione S-transferase, C-terminal domain VV1_RS13195 PF04209 homogentisate 1,2-dioxygenase VV1_RS13200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV1_RS13205 PF07687 Peptidase dimerisation domain VV1_RS13205 PF01546 Peptidase family M20/M25/M40 VV1_RS13210 PF02872 5'-nucleotidase, C-terminal domain VV1_RS13210 PF00149 Calcineurin-like phosphoesterase VV1_RS13215 PF04204 Homoserine O-succinyltransferase VV1_RS13230 PF05971 RNA methyltransferase VV1_RS13235 PF01863 Protein of unknown function DUF45 VV1_RS13245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS13245 PF03466 LysR substrate binding domain VV1_RS13250 PF07690 Major Facilitator Superfamily VV1_RS13265 PF00005 ABC transporter VV1_RS13270 PF01032 FecCD transport family VV1_RS13275 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VV1_RS13290 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VV1_RS13295 PF02654 Cobalamin-5-phosphate synthase VV1_RS13300 PF02277 Phosphoribosyltransferase VV1_RS13310 PF00929 Exonuclease VV1_RS13310 PF08411 Exonuclease C-terminal VV1_RS13315 PF03788 LrgA family VV1_RS13320 PF04172 LrgB-like family VV1_RS13330 PF01259 SAICAR synthetase VV1_RS13340 PF02253 Phospholipase A1 VV1_RS13345 PF00271 Helicase conserved C-terminal domain VV1_RS13345 PF08482 ATP-dependent helicase C-terminal VV1_RS13345 PF04408 Helicase associated domain (HA2) VV1_RS13345 PF00270 DEAD/DEAH box helicase VV1_RS13350 PF03949 Malic enzyme, NAD binding domain VV1_RS13350 PF00390 Malic enzyme, N-terminal domain VV1_RS13355 PF02698 DUF218 domain VV1_RS13360 PF00939 Sodium:sulfate symporter transmembrane region VV1_RS13365 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS13365 PF00072 Response regulator receiver domain VV1_RS13375 PF00266 Aminotransferase class-V VV1_RS13385 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS13390 PF00664 ABC transporter transmembrane region VV1_RS13390 PF00005 ABC transporter VV1_RS13395 PF00005 ABC transporter VV1_RS13395 PF00664 ABC transporter transmembrane region VV1_RS13400 PF00266 Aminotransferase class-V VV1_RS13410 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS13410 PF00989 PAS fold VV1_RS13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS13410 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS13410 PF13426 PAS domain VV1_RS13410 PF13426 PAS domain VV1_RS13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS13410 PF00989 PAS fold VV1_RS13410 PF13188 PAS domain VV1_RS13410 PF13188 PAS domain VV1_RS13425 PF04994 TfoX C-terminal domain VV1_RS13425 PF04993 TfoX N-terminal domain VV1_RS13435 PF03956 Lysine exporter LysO VV1_RS13445 PF00282 Pyridoxal-dependent decarboxylase conserved domain VV1_RS13450 PF01380 SIS domain VV1_RS13450 PF01418 Helix-turn-helix domain, rpiR family VV1_RS13455 PF00465 Iron-containing alcohol dehydrogenase VV1_RS13460 PF00462 Glutaredoxin VV1_RS13465 PF02080 TrkA-C domain VV1_RS13465 PF06826 Predicted Permease Membrane Region VV1_RS13470 PF07055 Enoyl reductase FAD binding domain VV1_RS13470 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VV1_RS13470 PF12241 Trans-2-enoyl-CoA reductase catalytic region VV1_RS13475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV1_RS13475 PF02770 Acyl-CoA dehydrogenase, middle domain VV1_RS13475 PF09317 Domain of unknown function (DUF1974) VV1_RS13475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV1_RS13485 PF06965 Na+/H+ antiporter 1 VV1_RS13500 PF00005 ABC transporter VV1_RS13505 PF13460 NAD(P)H-binding VV1_RS13505 PF11066 Protein of unknown function (DUF2867) VV1_RS13510 PF00999 Sodium/hydrogen exchanger family VV1_RS13520 PF07690 Major Facilitator Superfamily VV1_RS13525 PF00849 RNA pseudouridylate synthase VV1_RS13525 PF01479 S4 domain VV1_RS13530 PF00271 Helicase conserved C-terminal domain VV1_RS13530 PF04851 Type III restriction enzyme, res subunit VV1_RS13540 PF00486 Transcriptional regulatory protein, C terminal VV1_RS13540 PF00072 Response regulator receiver domain VV1_RS13545 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS13545 PF00672 HAMP domain VV1_RS13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS13550 PF01386 Ribosomal L25p family VV1_RS13565 PF00563 EAL domain VV1_RS13565 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS13565 PF03707 Bacterial signalling protein N terminal repeat VV1_RS13575 PF06945 Protein of unknown function (DUF1289) VV1_RS13585 PF13416 Bacterial extracellular solute-binding protein VV1_RS13590 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS13595 PF00005 ABC transporter VV1_RS13600 PF01066 CDP-alcohol phosphatidyltransferase VV1_RS13605 PF01590 GAF domain VV1_RS13605 PF00158 Sigma-54 interaction domain VV1_RS13610 PF03063 Prismane/CO dehydrogenase family VV1_RS13615 PF00970 Oxidoreductase FAD-binding domain VV1_RS13615 PF00111 2Fe-2S iron-sulfur cluster binding domain VV1_RS13615 PF00175 Oxidoreductase NAD-binding domain VV1_RS13625 PF00849 RNA pseudouridylate synthase VV1_RS13630 PF12729 Four helix bundle sensory module for signal transduction VV1_RS13630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS13630 PF00672 HAMP domain VV1_RS13635 PF00209 Sodium:neurotransmitter symporter family VV1_RS13640 PF13396 Phospholipase_D-nuclease N-terminal VV1_RS13640 PF13091 PLD-like domain VV1_RS13645 PF01053 Cys/Met metabolism PLP-dependent enzyme VV1_RS13650 PF03352 Methyladenine glycosylase VV1_RS13655 PF00873 AcrB/AcrD/AcrF family VV1_RS13660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV1_RS13670 PF04024 PspC domain VV1_RS13675 PF06667 Phage shock protein B VV1_RS13680 PF04012 PspA/IM30 family VV1_RS13685 PF02954 Bacterial regulatory protein, Fis family VV1_RS13685 PF00158 Sigma-54 interaction domain VV1_RS13690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV1_RS13695 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS13700 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS13700 PF12911 N-terminal TM domain of oligopeptide transport permease C VV1_RS13705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS13705 PF00005 ABC transporter VV1_RS13710 PF00005 ABC transporter VV1_RS13725 PF02833 DHHA2 domain VV1_RS13725 PF01368 DHH family VV1_RS13735 PF16875 Glycosyl hydrolase family 36 N-terminal domain VV1_RS13735 PF16874 Glycosyl hydrolase family 36 C-terminal domain VV1_RS13755 PF18364 Molybdopterin oxidoreductase N-terminal domain VV1_RS13755 PF01568 Molydopterin dinucleotide binding domain VV1_RS13755 PF00384 Molybdopterin oxidoreductase VV1_RS13760 PF03264 NapC/NirT cytochrome c family, N-terminal region VV1_RS13765 PF06796 Periplasmic nitrate reductase protein NapE VV1_RS13770 PF03649 Uncharacterised protein family (UPF0014) VV1_RS13775 PF01226 Formate/nitrite transporter VV1_RS13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS13795 PF03466 LysR substrate binding domain VV1_RS13800 PF01370 NAD dependent epimerase/dehydratase family VV1_RS13810 PF00265 Thymidine kinase VV1_RS13815 PF01406 tRNA synthetases class I (C) catalytic domain VV1_RS13815 PF09190 DALR domain VV1_RS13820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VV1_RS13825 PF00149 Calcineurin-like phosphoesterase VV1_RS13830 PF00563 EAL domain VV1_RS13830 PF08668 HDOD domain VV1_RS13835 PF02810 SEC-C motif VV1_RS13840 PF01502 Phosphoribosyl-AMP cyclohydrolase VV1_RS13840 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VV1_RS13845 PF00977 Histidine biosynthesis protein VV1_RS13850 PF00977 Histidine biosynthesis protein VV1_RS13855 PF00117 Glutamine amidotransferase class-I VV1_RS13860 PF00475 Imidazoleglycerol-phosphate dehydratase VV1_RS13860 PF08645 Polynucleotide kinase 3 phosphatase VV1_RS13865 PF00155 Aminotransferase class I and II VV1_RS13870 PF00815 Histidinol dehydrogenase VV1_RS13875 PF08029 HisG, C-terminal domain VV1_RS13875 PF01634 ATP phosphoribosyltransferase VV1_RS13880 PF03553 Na+/H+ antiporter family VV1_RS13885 PF00816 H-NS histone family VV1_RS13890 PF00294 pfkB family carbohydrate kinase VV1_RS13905 PF04356 Protein of unknown function (DUF489) VV1_RS13910 PF00206 Lyase VV1_RS13910 PF08328 Adenylosuccinate lyase C-terminal VV1_RS13945 PF00106 short chain dehydrogenase VV1_RS13955 PF01435 Peptidase family M48 VV1_RS13965 PF08241 Methyltransferase domain VV1_RS13970 PF00155 Aminotransferase class I and II VV1_RS13975 PF06968 Biotin and Thiamin Synthesis associated domain VV1_RS13975 PF04055 Radical SAM superfamily VV1_RS13980 PF00202 Aminotransferase class-III VV1_RS13985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV1_RS13985 PF02403 Seryl-tRNA synthetase N-terminal domain VV1_RS13990 PF12002 MgsA AAA+ ATPase C terminal VV1_RS13990 PF16193 AAA C-terminal domain VV1_RS13990 PF00004 ATPase family associated with various cellular activities (AAA) VV1_RS13995 PF03548 Outer membrane lipoprotein carrier protein LolA VV1_RS14000 PF09397 Ftsk gamma domain VV1_RS14000 PF01580 FtsK/SpoIIIE family VV1_RS14000 PF17854 FtsK alpha domain VV1_RS14000 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VV1_RS14005 PF01037 Lrp/AsnC ligand binding domain VV1_RS14010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VV1_RS14010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VV1_RS14020 PF03466 LysR substrate binding domain VV1_RS14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV1_RS14030 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VV1_RS14050 PF00753 Metallo-beta-lactamase superfamily VV1_RS14055 PF05951 Bacterial protein of unknown function (DUF882) VV1_RS14060 PF03734 L,D-transpeptidase catalytic domain VV1_RS14060 PF01471 Putative peptidoglycan binding domain VV1_RS14085 PF13006 Insertion element 4 transposase N-terminal VV1_RS14085 PF01609 Transposase DDE domain VV1_RS14100 PF00005 ABC transporter VV1_RS14100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS14105 PF00005 ABC transporter VV1_RS14105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS14110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV1_RS14115 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS14115 PF12911 N-terminal TM domain of oligopeptide transport permease C VV1_RS14120 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS14125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VV1_RS14130 PF18073 Rubredoxin metal binding domain VV1_RS14135 PF06305 Lipopolysaccharide assembly protein A domain VV1_RS14140 PF00216 Bacterial DNA-binding protein VV1_RS14145 PF00575 S1 RNA binding domain VV1_RS14150 PF02224 Cytidylate kinase VV1_RS14155 PF01343 Peptidase family S49 VV1_RS14155 PF08496 Peptidase family S49 N-terminal VV1_RS14160 PF00106 short chain dehydrogenase VV1_RS14175 PF02811 PHP domain VV1_RS14175 PF07733 Bacterial DNA polymerase III alpha NTPase domain VV1_RS14175 PF14579 Helix-hairpin-helix motif VV1_RS14175 PF01336 OB-fold nucleic acid binding domain VV1_RS14175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VV1_RS14180 PF00072 Response regulator receiver domain VV1_RS14180 PF01584 CheW-like domain VV1_RS14185 PF00480 ROK family VV1_RS14190 PF02887 Pyruvate kinase, alpha/beta domain VV1_RS14190 PF00224 Pyruvate kinase, barrel domain VV1_RS14195 PF01734 Patatin-like phospholipase VV1_RS14205 PF00209 Sodium:neurotransmitter symporter family VV1_RS14215 PF00367 phosphotransferase system, EIIB VV1_RS14215 PF02378 Phosphotransferase system, EIIC VV1_RS14220 PF01026 TatD related DNase VV1_RS14225 PF09115 DNA polymerase III, delta subunit, C terminal VV1_RS14230 PF02223 Thymidylate kinase VV1_RS14235 PF02618 YceG-like family VV1_RS14240 PF01063 Amino-transferase class IV VV1_RS14245 PF00109 Beta-ketoacyl synthase, N-terminal domain VV1_RS14245 PF02801 Beta-ketoacyl synthase, C-terminal domain VV1_RS14250 PF00550 Phosphopantetheine attachment site VV1_RS14260 PF00698 Acyl transferase domain VV1_RS14265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VV1_RS14265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VV1_RS14270 PF02504 Fatty acid synthesis protein VV1_RS14275 PF01783 Ribosomal L32p protein family VV1_RS14280 PF02620 Large ribosomal RNA subunit accumulation protein YceD VV1_RS14285 PF02545 Maf-like protein VV1_RS14290 PF00849 RNA pseudouridylate synthase VV1_RS14290 PF01479 S4 domain VV1_RS14295 PF00575 S1 RNA binding domain VV1_RS14295 PF10150 Ribonuclease E/G family VV1_RS14295 PF12111 Polyribonucleotide phosphorylase C terminal VV1_RS14300 PF00916 Sulfate permease family VV1_RS14300 PF01740 STAS domain VV1_RS14305 PF01451 Low molecular weight phosphotyrosine protein phosphatase VV1_RS14310 PF12557 Cob(I)alamin adenosyltransferase N terminal VV1_RS14310 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VV1_RS14320 PF00485 Phosphoribulokinase / Uridine kinase family VV1_RS14325 PF10609 NUBPL iron-transfer P-loop NTPase VV1_RS14330 PF01588 Putative tRNA binding domain VV1_RS14330 PF09334 tRNA synthetases class I (M) VV1_RS14345 PF03918 Cytochrome C biogenesis protein VV1_RS14350 PF08534 Redoxin VV1_RS14355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VV1_RS14355 PF01578 Cytochrome C assembly protein VV1_RS14360 PF03916 Polysulphide reductase, NrfD VV1_RS14365 PF13247 4Fe-4S dicluster domain VV1_RS14375 PF02335 Cytochrome c552 VV1_RS14390 PF00521 DNA gyrase/topoisomerase IV, subunit A VV1_RS14390 PF03989 DNA gyrase C-terminal domain, beta-propeller VV1_RS14405 PF03477 ATP cone domain VV1_RS14405 PF00317 Ribonucleotide reductase, all-alpha domain VV1_RS14405 PF02867 Ribonucleotide reductase, barrel domain VV1_RS14410 PF00268 Ribonucleotide reductase, small chain VV1_RS14420 PF02464 Competence-damaged protein VV1_RS14420 PF00994 Probable molybdopterin binding domain VV1_RS14440 PF16653 Saccharopine dehydrogenase C-terminal domain VV1_RS14440 PF03435 Saccharopine dehydrogenase NADP binding domain VV1_RS14445 PF00202 Aminotransferase class-III VV1_RS14470 PF01066 CDP-alcohol phosphatidyltransferase VV1_RS14475 PF02151 UvrB/uvrC motif VV1_RS14475 PF01541 GIY-YIG catalytic domain VV1_RS14475 PF08459 UvrC Helix-hairpin-helix N-terminal VV1_RS14480 PF00072 Response regulator receiver domain VV1_RS14480 PF00196 Bacterial regulatory proteins, luxR family VV1_RS14485 PF00136 DNA polymerase family B VV1_RS14485 PF03104 DNA polymerase family B, exonuclease domain VV1_RS14490 PF00563 EAL domain VV1_RS14490 PF08448 PAS fold VV1_RS14490 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS14490 PF08447 PAS fold VV1_RS14500 PF09285 Elongation factor P, C-terminal VV1_RS14500 PF08207 Elongation factor P (EF-P) KOW-like domain VV1_RS14500 PF01132 Elongation factor P (EF-P) OB domain VV1_RS14505 PF04269 Protein of unknown function, DUF440 VV1_RS14510 PF00849 RNA pseudouridylate synthase VV1_RS14510 PF01479 S4 domain VV1_RS14520 PF01300 Telomere recombination VV1_RS14525 PF02811 PHP domain VV1_RS14530 PF08056 Tryptophan operon leader peptide VV1_RS14535 PF04715 Anthranilate synthase component I, N terminal region VV1_RS14535 PF00425 chorismate binding enzyme VV1_RS14540 PF00117 Glutamine amidotransferase class-I VV1_RS14545 PF00591 Glycosyl transferase family, a/b domain VV1_RS14545 PF02885 Glycosyl transferase family, helical bundle domain VV1_RS14550 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VV1_RS14550 PF00218 Indole-3-glycerol phosphate synthase VV1_RS14555 PF00291 Pyridoxal-phosphate dependent enzyme VV1_RS14560 PF00290 Tryptophan synthase alpha chain VV1_RS14565 PF00375 Sodium:dicarboxylate symporter family VV1_RS14575 PF04279 Intracellular septation protein A VV1_RS14580 PF03061 Thioesterase superfamily VV1_RS14585 PF03795 YCII-related domain VV1_RS14595 PF13409 Glutathione S-transferase, N-terminal domain VV1_RS14600 PF00005 ABC transporter VV1_RS14600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS14605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS14605 PF00005 ABC transporter VV1_RS14610 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS14610 PF12911 N-terminal TM domain of oligopeptide transport permease C VV1_RS14615 PF00528 Binding-protein-dependent transport system inner membrane component VV1_RS14620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV1_RS14625 PF02391 MoaE protein VV1_RS14630 PF02597 ThiS family VV1_RS14635 PF01967 MoaC family VV1_RS14640 PF00994 Probable molybdopterin binding domain VV1_RS14645 PF04055 Radical SAM superfamily VV1_RS14645 PF06463 Molybdenum Cofactor Synthesis C VV1_RS14650 PF01933 Uncharacterised protein family UPF0052 VV1_RS14655 PF01627 Hpt domain VV1_RS14660 PF00158 Sigma-54 interaction domain VV1_RS14660 PF00072 Response regulator receiver domain VV1_RS14660 PF02954 Bacterial regulatory protein, Fis family VV1_RS14665 PF04851 Type III restriction enzyme, res subunit VV1_RS14665 PF00271 Helicase conserved C-terminal domain VV1_RS14665 PF02151 UvrB/uvrC motif VV1_RS14665 PF12344 Ultra-violet resistance protein B VV1_RS14665 PF17757 UvrB interaction domain VV1_RS14680 PF02508 Rnf-Nqr subunit, membrane protein VV1_RS14685 PF04060 Putative Fe-S cluster VV1_RS14690 PF12838 4Fe-4S dicluster domain VV1_RS14690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VV1_RS14690 PF10531 SLBB domain VV1_RS14690 PF13375 RnfC Barrel sandwich hybrid domain VV1_RS14695 PF03116 NQR2, RnfD, RnfE family VV1_RS14700 PF04205 FMN-binding domain VV1_RS14705 PF02508 Rnf-Nqr subunit, membrane protein VV1_RS14710 PF10576 Iron-sulfur binding domain of endonuclease III VV1_RS14710 PF00633 Helix-hairpin-helix motif VV1_RS14710 PF00730 HhH-GPD superfamily base excision DNA repair protein VV1_RS14715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV1_RS14720 PF10952 Protein of unknown function (DUF2753) VV1_RS14725 PF18393 MotY N-terminal domain VV1_RS14725 PF00691 OmpA family VV1_RS14730 PF00929 Exonuclease VV1_RS14735 PF13726 Na+-H+ antiporter family VV1_RS14735 PF03553 Na+/H+ antiporter family VV1_RS14745 PF00462 Glutaredoxin VV1_RS14750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VV1_RS14750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VV1_RS14765 PF00171 Aldehyde dehydrogenase family VV1_RS14765 PF00465 Iron-containing alcohol dehydrogenase VV1_RS14770 PF01914 MarC family integral membrane protein VV1_RS14775 PF00027 Cyclic nucleotide-binding domain VV1_RS14775 PF00520 Ion transport protein VV1_RS14785 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV1_RS14785 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV1_RS14790 PF03553 Na+/H+ antiporter family VV1_RS14805 PF04245 37-kD nucleoid-associated bacterial protein VV1_RS14810 PF07208 Protein of unknown function (DUF1414) VV1_RS14815 PF00884 Sulfatase VV1_RS14815 PF11893 Domain of unknown function (DUF3413) VV1_RS14825 PF02080 TrkA-C domain VV1_RS14825 PF02254 TrkA-N domain VV1_RS14830 PF02386 Cation transport protein VV1_RS14835 PF04074 YhcH/YjgK/YiaL VV1_RS14840 PF13091 PLD-like domain VV1_RS14845 PF00072 Response regulator receiver domain VV1_RS14845 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS14850 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS14850 PF09308 LuxQ, periplasmic VV1_RS14850 PF00072 Response regulator receiver domain VV1_RS14850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS14855 PF00850 Histone deacetylase domain VV1_RS14860 PF01131 DNA topoisomerase VV1_RS14860 PF01751 Toprim domain VV1_RS14865 PF00881 Nitroreductase family VV1_RS14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV1_RS14870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VV1_RS14875 PF01343 Peptidase family S49 VV1_RS14880 PF00710 Asparaginase, N-terminal VV1_RS14880 PF17763 Glutaminase/Asparaginase C-terminal domain VV1_RS14885 PF07023 Protein of unknown function (DUF1315) VV1_RS14895 PF01641 SelR domain VV1_RS14900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV1_RS14900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV1_RS14905 PF01263 Aldose 1-epimerase VV1_RS14910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV1_RS14910 PF00672 HAMP domain VV1_RS14910 PF02743 Cache domain VV1_RS14925 PF07969 Amidohydrolase family VV1_RS14930 PF13426 PAS domain VV1_RS14930 PF00563 EAL domain VV1_RS14930 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS14940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VV1_RS14945 PF09619 Type III secretion system lipoprotein chaperone (YscW) VV1_RS14960 PF13404 AsnC-type helix-turn-helix domain VV1_RS14960 PF01037 Lrp/AsnC ligand binding domain VV1_RS14965 PF00291 Pyridoxal-phosphate dependent enzyme VV1_RS14980 PF00873 AcrB/AcrD/AcrF family VV1_RS14985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV1_RS14985 PF00529 HlyD membrane-fusion protein of T1SS VV1_RS15015 PF07690 Major Facilitator Superfamily VV1_RS15020 PF03601 Conserved hypothetical protein 698 VV1_RS15030 PF00501 AMP-binding enzyme VV1_RS15030 PF13193 AMP-binding enzyme C-terminal domain VV1_RS15035 PF13378 Enolase C-terminal domain-like VV1_RS15040 PF00378 Enoyl-CoA hydratase/isomerase VV1_RS15045 PF12697 Alpha/beta hydrolase family VV1_RS15050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV1_RS15050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV1_RS15050 PF16582 Middle domain of thiamine pyrophosphate VV1_RS15055 PF00425 chorismate binding enzyme VV1_RS15060 PF00155 Aminotransferase class I and II VV1_RS15165 PF01548 Transposase VV1_RS15165 PF02371 Transposase IS116/IS110/IS902 family VV1_RS15170 PF00529 HlyD membrane-fusion protein of T1SS VV1_RS15170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV1_RS15180 PF13091 PLD-like domain VV1_RS15190 PF00072 Response regulator receiver domain VV1_RS15190 PF00486 Transcriptional regulatory protein, C terminal VV1_RS15195 PF00072 Response regulator receiver domain VV1_RS15195 PF09456 RcsC Alpha-Beta-Loop (ABL) VV1_RS15195 PF00512 His Kinase A (phospho-acceptor) domain VV1_RS15195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS15200 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS15200 PF00563 EAL domain VV1_RS15200 PF03707 Bacterial signalling protein N terminal repeat VV1_RS15205 PF00144 Beta-lactamase VV1_RS15465 PF00221 Aromatic amino acid lyase VV1_RS15950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS15950 PF00183 Hsp90 protein VV1_RS16050 PF05524 PEP-utilising enzyme, N-terminal VV1_RS16050 PF00391 PEP-utilising enzyme, mobile domain VV1_RS16050 PF02896 PEP-utilising enzyme, TIM barrel domain VV1_RS16315 PF01098 Cell cycle protein VV1_RS16450 PF02568 Thiamine biosynthesis protein (ThiI) VV1_RS16450 PF02926 THUMP domain VV1_RS16555 PF00860 Permease family VV1_RS16610 PF02769 AIR synthase related protein, C-terminal domain VV1_RS16610 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VV1_RS16610 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VV1_RS16685 PF00012 Hsp70 protein VV1_RS17445 PF00291 Pyridoxal-phosphate dependent enzyme VV1_RS17445 PF14821 Threonine synthase N terminus VV1_RS17505 PF00310 Glutamine amidotransferases class-II VV1_RS17505 PF01493 GXGXG motif VV1_RS17505 PF01645 Conserved region in glutamate synthase VV1_RS17505 PF04898 Glutamate synthase central domain VV1_RS17520 PF01645 Conserved region in glutamate synthase VV1_RS17520 PF00310 Glutamine amidotransferases class-II VV1_RS17520 PF01493 GXGXG motif VV1_RS17520 PF04898 Glutamate synthase central domain VV1_RS17525 PF00310 Glutamine amidotransferases class-II VV1_RS17525 PF04898 Glutamate synthase central domain VV1_RS17525 PF01645 Conserved region in glutamate synthase VV1_RS17525 PF01493 GXGXG motif VV1_RS17550 PF01493 GXGXG motif VV1_RS17550 PF00310 Glutamine amidotransferases class-II VV1_RS17550 PF04898 Glutamate synthase central domain VV1_RS17550 PF01645 Conserved region in glutamate synthase VV1_RS17760 PF03989 DNA gyrase C-terminal domain, beta-propeller VV1_RS17760 PF00521 DNA gyrase/topoisomerase IV, subunit A VV1_RS17785 PF00204 DNA gyrase B VV1_RS17785 PF01751 Toprim domain VV1_RS17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV1_RS17785 PF00986 DNA gyrase B subunit, carboxyl terminus VV1_RS17805 PF01467 Cytidylyltransferase-like VV1_RS17805 PF00294 pfkB family carbohydrate kinase VV1_RS18245 PF01225 Mur ligase family, catalytic domain VV1_RS18245 PF02875 Mur ligase family, glutamate ligase domain VV1_RS18245 PF08245 Mur ligase middle domain VV1_RS18445 PF13402 Peptidase M60, enhancin and enhancin-like VV1_RS18445 PF17291 N-terminal domain of M60-like peptidases VV1_RS18445 PF13322 Domain of unknown function (DUF4092) VV1_RS18450 PF17291 N-terminal domain of M60-like peptidases VV1_RS18450 PF13322 Domain of unknown function (DUF4092) VV1_RS18450 PF13402 Peptidase M60, enhancin and enhancin-like VV1_RS18870 PF00270 DEAD/DEAH box helicase VV1_RS18870 PF17191 RecG wedge domain VV1_RS18870 PF00271 Helicase conserved C-terminal domain VV1_RS19180 PF00271 Helicase conserved C-terminal domain VV1_RS19180 PF00570 HRDC domain VV1_RS19180 PF09382 RQC domain VV1_RS19180 PF16124 RecQ zinc-binding VV1_RS19180 PF00270 DEAD/DEAH box helicase VV1_RS19205 PF13361 UvrD-like helicase C-terminal domain VV1_RS19205 PF00580 UvrD/REP helicase N-terminal domain VV1_RS19265 PF02581 Thiamine monophosphate synthase VV1_RS19390 PF05746 DALR anticodon binding domain VV1_RS19390 PF02092 Glycyl-tRNA synthetase beta subunit VV1_RS19460 PF01926 50S ribosome-binding GTPase VV1_RS19460 PF12631 MnmE helical domain VV1_RS19460 PF10396 GTP-binding protein TrmE N-terminus VV1_RS19630 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VV1_RS19630 PF13746 4Fe-4S dicluster domain VV1_RS19630 PF12801 4Fe-4S binding domain VV1_RS19870 PF00920 Dehydratase family VV1_RS19945 PF00892 EamA-like transporter family VV1_RS19995 PF01295 Adenylate cyclase, class-I VV1_RS19995 PF12633 Adenylate cyclase NT domain VV1_RS20040 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS20040 PF00563 EAL domain VV1_RS20040 PF10442 FIST C domain VV1_RS20040 PF08495 FIST N domain VV1_RS20265 PF00009 Elongation factor Tu GTP binding domain VV1_RS20265 PF03144 Elongation factor Tu domain 2 VV1_RS20265 PF03143 Elongation factor Tu C-terminal domain VV1_RS20300 PF04997 RNA polymerase Rpb1, domain 1 VV1_RS20300 PF04983 RNA polymerase Rpb1, domain 3 VV1_RS20300 PF05000 RNA polymerase Rpb1, domain 4 VV1_RS20300 PF04998 RNA polymerase Rpb1, domain 5 VV1_RS20300 PF00623 RNA polymerase Rpb1, domain 2 VV1_RS20415 PF00474 Sodium:solute symporter family VV1_RS20510 PF01132 Elongation factor P (EF-P) OB domain VV1_RS20510 PF09285 Elongation factor P, C-terminal VV1_RS20510 PF08207 Elongation factor P (EF-P) KOW-like domain VV1_RS20750 PF00171 Aldehyde dehydrogenase family VV1_RS20775 PF00561 alpha/beta hydrolase fold VV1_RS20800 PF02254 TrkA-N domain VV1_RS20800 PF00999 Sodium/hydrogen exchanger family VV1_RS20895 PF02219 Methylenetetrahydrofolate reductase VV1_RS21090 PF02310 B12 binding domain VV1_RS21090 PF02607 B12 binding domain VV1_RS21090 PF02574 Homocysteine S-methyltransferase VV1_RS21090 PF00809 Pterin binding enzyme VV1_RS21090 PF02965 Vitamin B12 dependent methionine synthase, activation domain VV1_RS21590 PF02910 Fumarate reductase flavoprotein C-term VV1_RS21590 PF00890 FAD binding domain VV1_RS21615 PF00679 Elongation factor G C-terminus VV1_RS21615 PF03144 Elongation factor Tu domain 2 VV1_RS21615 PF06421 GTP-binding protein LepA C-terminus VV1_RS21615 PF00009 Elongation factor Tu GTP binding domain VV1_RS21645 PF08448 PAS fold VV1_RS21645 PF08447 PAS fold VV1_RS21645 PF00563 EAL domain VV1_RS21645 PF13426 PAS domain VV1_RS21645 PF05231 MASE1 VV1_RS21645 PF00990 Diguanylate cyclase, GGDEF domain VV1_RS21710 PF05188 MutS domain II VV1_RS21710 PF00488 MutS domain V VV1_RS21710 PF01624 MutS domain I VV1_RS21710 PF05190 MutS family domain IV VV1_RS21710 PF05192 MutS domain III VV1_RS21775 PF00682 HMGL-like VV1_RS21775 PF02436 Conserved carboxylase domain VV1_RS21775 PF00364 Biotin-requiring enzyme VV1_RS21780 PF02436 Conserved carboxylase domain VV1_RS21780 PF00364 Biotin-requiring enzyme VV1_RS21780 PF00682 HMGL-like VV1_RS21820 PF04262 Glutamate-cysteine ligase VV1_RS22110 PF06165 Glycosyltransferase family 36 VV1_RS22110 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VV1_RS22115 PF00728 Glycosyl hydrolase family 20, catalytic domain VV1_RS22115 PF02838 Glycosyl hydrolase family 20, domain 2 VV1_RS22130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV1_RS22130 PF00005 ABC transporter VV1_RS22555 PF00356 Bacterial regulatory proteins, lacI family VV1_RS22690 PF17946 RecC C-terminal domain VV1_RS22775 PF00266 Aminotransferase class-V VV1_RS22840 PF03116 NQR2, RnfD, RnfE family VV1_RS22965 PF00156 Phosphoribosyl transferase domain VV1_RS22985 PF13592 Winged helix-turn helix VV1_RS22985 PF13358 DDE superfamily endonuclease