locus-tag class description BJD94_RS00010 PF02657 Fe-S metabolism associated domain BJD94_RS00030 PF02558 Ketopantoate reductase PanE/ApbA BJD94_RS00030 PF08546 Ketopantoate reductase PanE/ApbA C terminal BJD94_RS00035 PF03502 Nucleoside-specific channel-forming protein, Tsx BJD94_RS00045 PF04542 Sigma-70 region 2 BJD94_RS00045 PF04545 Sigma-70, region 4 BJD94_RS00055 PF07690 Major Facilitator Superfamily BJD94_RS00060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJD94_RS00070 PF05175 Methyltransferase small domain BJD94_RS00075 PF01722 BolA-like protein BJD94_RS00080 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BJD94_RS00080 PF11973 NQRA C-terminal domain BJD94_RS00085 PF03116 NQR2, RnfD, RnfE family BJD94_RS00090 PF04205 FMN-binding domain BJD94_RS00095 PF02508 Rnf-Nqr subunit, membrane protein BJD94_RS00100 PF02508 Rnf-Nqr subunit, membrane protein BJD94_RS00105 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD94_RS00105 PF00175 Oxidoreductase NAD-binding domain BJD94_RS00105 PF00970 Oxidoreductase FAD-binding domain BJD94_RS00110 PF02424 ApbE family BJD94_RS00120 PF00072 Response regulator receiver domain BJD94_RS00120 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS00125 PF00817 impB/mucB/samB family BJD94_RS00125 PF11799 impB/mucB/samB family C-terminal domain BJD94_RS00130 PF09382 RQC domain BJD94_RS00130 PF16124 RecQ zinc-binding BJD94_RS00130 PF00570 HRDC domain BJD94_RS00130 PF00271 Helicase conserved C-terminal domain BJD94_RS00130 PF00270 DEAD/DEAH box helicase BJD94_RS00140 PF00704 Glycosyl hydrolases family 18 BJD94_RS00140 PF00041 Fibronectin type III domain BJD94_RS00145 PF00209 Sodium:neurotransmitter symporter family BJD94_RS00155 PF06786 Uncharacterised protein family (UPF0253) BJD94_RS00165 PF04073 Aminoacyl-tRNA editing domain BJD94_RS00165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD94_RS00165 PF03129 Anticodon binding domain BJD94_RS00170 PF18389 TrmO C-terminal domain BJD94_RS00170 PF01980 tRNA-methyltransferase O BJD94_RS00175 PF01197 Ribosomal protein L31 BJD94_RS00180 PF00444 Ribosomal protein L36 BJD94_RS00185 PF03806 AbgT putative transporter family BJD94_RS00190 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BJD94_RS00220 PF04287 tRNA pseudouridine synthase C BJD94_RS00225 PF00849 RNA pseudouridylate synthase BJD94_RS00230 PF11944 Protein of unknown function (DUF3461) BJD94_RS00235 PF01966 HD domain BJD94_RS00235 PF08335 GlnD PII-uridylyltransferase BJD94_RS00235 PF01909 Nucleotidyltransferase domain BJD94_RS00240 PF00557 Metallopeptidase family M24 BJD94_RS00245 PF00318 Ribosomal protein S2 BJD94_RS00250 PF00889 Elongation factor TS BJD94_RS00255 PF00696 Amino acid kinase family BJD94_RS00260 PF01765 Ribosome recycling factor BJD94_RS00265 PF01255 Putative undecaprenyl diphosphate synthase BJD94_RS00275 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BJD94_RS00275 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BJD94_RS00275 PF13288 DXP reductoisomerase C-terminal domain BJD94_RS00280 PF02163 Peptidase family M50 BJD94_RS00280 PF17820 PDZ domain BJD94_RS00285 PF01103 Surface antigen BJD94_RS00285 PF07244 Surface antigen variable number repeat BJD94_RS00290 PF03938 Outer membrane protein (OmpH-like) BJD94_RS00295 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BJD94_RS00295 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS00300 PF07977 FabA-like domain BJD94_RS00305 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BJD94_RS00305 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS00310 PF02684 Lipid-A-disaccharide synthetase BJD94_RS00315 PF01351 Ribonuclease HII BJD94_RS00320 PF14579 Helix-hairpin-helix motif BJD94_RS00320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJD94_RS00320 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJD94_RS00320 PF01336 OB-fold nucleic acid binding domain BJD94_RS00320 PF02811 PHP domain BJD94_RS00325 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BJD94_RS00330 PF01171 PP-loop family BJD94_RS00330 PF09179 TilS substrate binding domain BJD94_RS00330 PF11734 TilS substrate C-terminal domain BJD94_RS00335 PF00034 Cytochrome c BJD94_RS00340 PF00543 Nitrogen regulatory protein P-II BJD94_RS00345 PF03372 Endonuclease/Exonuclease/phosphatase family BJD94_RS00355 PF01464 Transglycosylase SLT domain BJD94_RS00355 PF01476 LysM domain BJD94_RS00360 PF16123 Hydroxyacylglutathione hydrolase C-terminus BJD94_RS00360 PF00753 Metallo-beta-lactamase superfamily BJD94_RS00365 PF08241 Methyltransferase domain BJD94_RS00370 PF00075 RNase H BJD94_RS00375 PF00929 Exonuclease BJD94_RS00385 PF02525 Flavodoxin-like fold BJD94_RS00390 PF02254 TrkA-N domain BJD94_RS00390 PF00999 Sodium/hydrogen exchanger family BJD94_RS00410 PF02770 Acyl-CoA dehydrogenase, middle domain BJD94_RS00410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD94_RS00410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD94_RS00410 PF09317 Domain of unknown function (DUF1974) BJD94_RS00415 PF13580 SIS domain BJD94_RS00420 PF13230 Glutamine amidotransferases class-II BJD94_RS00425 PF00551 Formyl transferase BJD94_RS00430 PF00586 AIR synthase related protein, N-terminal domain BJD94_RS00430 PF02769 AIR synthase related protein, C-terminal domain BJD94_RS00440 PF00860 Permease family BJD94_RS00455 PF03358 NADPH-dependent FMN reductase BJD94_RS00460 PF03960 ArsC family BJD94_RS00465 PF01435 Peptidase family M48 BJD94_RS00465 PF13181 Tetratricopeptide repeat BJD94_RS00475 PF01594 AI-2E family transporter BJD94_RS00480 PF00578 AhpC/TSA family BJD94_RS00485 PF01842 ACT domain BJD94_RS00490 PF00701 Dihydrodipicolinate synthetase family BJD94_RS00495 PF06804 NlpB/DapX lipoprotein BJD94_RS00510 PF01546 Peptidase family M20/M25/M40 BJD94_RS00510 PF07687 Peptidase dimerisation domain BJD94_RS00515 PF03960 ArsC family BJD94_RS00540 PF04261 Dyp-type peroxidase family BJD94_RS00545 PF07196 Flagellin hook IN motif BJD94_RS00545 PF00669 Bacterial flagellin N-terminal helical region BJD94_RS00545 PF00700 Bacterial flagellin C-terminal helical region BJD94_RS00550 PF00700 Bacterial flagellin C-terminal helical region BJD94_RS00550 PF07196 Flagellin hook IN motif BJD94_RS00550 PF00669 Bacterial flagellin N-terminal helical region BJD94_RS00555 PF00700 Bacterial flagellin C-terminal helical region BJD94_RS00555 PF07196 Flagellin hook IN motif BJD94_RS00555 PF00669 Bacterial flagellin N-terminal helical region BJD94_RS00560 PF03646 FlaG protein BJD94_RS00565 PF07196 Flagellin hook IN motif BJD94_RS00565 PF02465 Flagellar hook-associated protein 2 N-terminus BJD94_RS00565 PF07195 Flagellar hook-associated protein 2 C-terminus BJD94_RS00575 PF02561 Flagellar protein FliS BJD94_RS00580 PF00158 Sigma-54 interaction domain BJD94_RS00580 PF02954 Bacterial regulatory protein, Fis family BJD94_RS00580 PF06490 Flagellar regulatory protein FleQ BJD94_RS00585 PF13188 PAS domain BJD94_RS00585 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS00585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS00590 PF00158 Sigma-54 interaction domain BJD94_RS00590 PF00072 Response regulator receiver domain BJD94_RS00590 PF02954 Bacterial regulatory protein, Fis family BJD94_RS00595 PF02049 Flagellar hook-basal body complex protein FliE BJD94_RS00600 PF01514 Secretory protein of YscJ/FliF family BJD94_RS00600 PF08345 Flagellar M-ring protein C-terminal BJD94_RS00605 PF01706 FliG C-terminal domain BJD94_RS00605 PF14842 FliG N-terminal domain BJD94_RS00605 PF14841 FliG middle domain BJD94_RS00615 PF18269 T3SS EscN ATPase C-terminal domain BJD94_RS00615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD94_RS00635 PF02154 Flagellar motor switch protein FliM BJD94_RS00635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BJD94_RS00640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BJD94_RS00645 PF04347 Flagellar biosynthesis protein, FliO BJD94_RS00650 PF00813 FliP family BJD94_RS00655 PF01313 Bacterial export proteins, family 3 BJD94_RS00660 PF01311 Bacterial export proteins, family 1 BJD94_RS00665 PF01312 FlhB HrpN YscU SpaS Family BJD94_RS00670 PF00771 FHIPEP family BJD94_RS00675 PF00448 SRP54-type protein, GTPase domain BJD94_RS00680 PF10609 NUBPL iron-transfer P-loop NTPase BJD94_RS00685 PF04539 Sigma-70 region 3 BJD94_RS00685 PF04542 Sigma-70 region 2 BJD94_RS00685 PF04545 Sigma-70, region 4 BJD94_RS00690 PF00072 Response regulator receiver domain BJD94_RS00695 PF04344 Chemotaxis phosphatase, CheZ BJD94_RS00700 PF00072 Response regulator receiver domain BJD94_RS00700 PF01627 Hpt domain BJD94_RS00700 PF02895 Signal transducing histidine kinase, homodimeric domain BJD94_RS00700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS00700 PF01584 CheW-like domain BJD94_RS00705 PF00072 Response regulator receiver domain BJD94_RS00705 PF01339 CheB methylesterase BJD94_RS00710 PF13614 AAA domain BJD94_RS00720 PF01584 CheW-like domain BJD94_RS00730 PF00005 ABC transporter BJD94_RS00735 PF03379 CcmB protein BJD94_RS00740 PF01578 Cytochrome C assembly protein BJD94_RS00745 PF04995 Heme exporter protein D (CcmD) BJD94_RS00750 PF03100 CcmE BJD94_RS00755 PF01578 Cytochrome C assembly protein BJD94_RS00755 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BJD94_RS00760 PF08534 Redoxin BJD94_RS00765 PF03918 Cytochrome C biogenesis protein BJD94_RS00770 PF03918 Cytochrome C biogenesis protein BJD94_RS00775 PF04333 MlaA lipoprotein BJD94_RS00780 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_RS00785 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_RS00795 PF08281 Sigma-70, region 4 BJD94_RS00795 PF04542 Sigma-70 region 2 BJD94_RS00800 PF00108 Thiolase, N-terminal domain BJD94_RS00800 PF02803 Thiolase, C-terminal domain BJD94_RS00805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD94_RS00805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD94_RS00805 PF00378 Enoyl-CoA hydratase/isomerase BJD94_RS00810 PF05193 Peptidase M16 inactive domain BJD94_RS00810 PF00675 Insulinase (Peptidase family M16) BJD94_RS00820 PF00300 Histidine phosphatase superfamily (branch 1) BJD94_RS00825 PF01713 Smr domain BJD94_RS00830 PF05175 Methyltransferase small domain BJD94_RS00835 PF01264 Chorismate synthase BJD94_RS00840 PF03458 UPF0126 domain BJD94_RS00845 PF04315 Elongation factor P hydroxylase BJD94_RS00850 PF08891 YfcL protein BJD94_RS00855 PF01266 FAD dependent oxidoreductase BJD94_RS00855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BJD94_RS00860 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD94_RS00860 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD94_RS00865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD94_RS00865 PF11890 Domain of unknown function (DUF3410) BJD94_RS00865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD94_RS00870 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJD94_RS00870 PF02774 Semialdehyde dehydrogenase, dimerisation domain BJD94_RS00885 PF01416 tRNA pseudouridine synthase BJD94_RS00890 PF01039 Carboxyl transferase domain BJD94_RS00890 PF17848 Acetyl-coA carboxylase zinc finger domain BJD94_RS00895 PF08245 Mur ligase middle domain BJD94_RS00895 PF02875 Mur ligase family, glutamate ligase domain BJD94_RS00900 PF05036 Sporulation related domain BJD94_RS00905 PF02674 Colicin V production protein BJD94_RS00910 PF00156 Phosphoribosyl transferase domain BJD94_RS00915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS00915 PF03466 LysR substrate binding domain BJD94_RS00920 PF00072 Response regulator receiver domain BJD94_RS00930 PF04304 Protein of unknown function (DUF454) BJD94_RS00935 PF00156 Phosphoribosyl transferase domain BJD94_RS00940 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BJD94_RS00940 PF12170 DNA polymerase III tau subunit V interacting with alpha BJD94_RS00940 PF12169 DNA polymerase III subunits gamma and tau domain III BJD94_RS00945 PF02575 YbaB/EbfC DNA-binding family BJD94_RS00950 PF13662 Toprim domain BJD94_RS00950 PF02132 RecR protein BJD94_RS00965 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS00965 PF00672 HAMP domain BJD94_RS00970 PF00072 Response regulator receiver domain BJD94_RS00970 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS00975 PF00230 Major intrinsic protein BJD94_RS00980 PF03692 Putative zinc- or iron-chelating domain BJD94_RS00985 PF03692 Putative zinc- or iron-chelating domain BJD94_RS00995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS01005 PF00245 Alkaline phosphatase BJD94_RS01020 PF13847 Methyltransferase domain BJD94_RS01025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BJD94_RS01025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BJD94_RS01035 PF01769 Divalent cation transporter BJD94_RS01035 PF03448 MgtE intracellular N domain BJD94_RS01035 PF00571 CBS domain BJD94_RS01040 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS01050 PF02743 Cache domain BJD94_RS01050 PF00672 HAMP domain BJD94_RS01050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS01055 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS01055 PF18500 CadC C-terminal domain 1 BJD94_RS01060 PF13520 Amino acid permease BJD94_RS01065 PF01276 Orn/Lys/Arg decarboxylase, major domain BJD94_RS01065 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BJD94_RS01065 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BJD94_RS01070 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS01075 PF00571 CBS domain BJD94_RS01075 PF01743 Poly A polymerase head domain BJD94_RS01080 PF00403 Heavy-metal-associated domain BJD94_RS01085 PF01048 Phosphorylase superfamily BJD94_RS01095 PF00672 HAMP domain BJD94_RS01095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS01100 PF01230 HIT domain BJD94_RS01115 PF13036 Peptidoglycan-synthase activator LpoB BJD94_RS01115 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BJD94_RS01125 PF05728 Uncharacterised protein family (UPF0227) BJD94_RS01130 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS01145 PF00271 Helicase conserved C-terminal domain BJD94_RS01145 PF02559 CarD-like/TRCF domain BJD94_RS01145 PF17757 UvrB interaction domain BJD94_RS01145 PF03461 TRCF domain BJD94_RS01145 PF00270 DEAD/DEAH box helicase BJD94_RS01155 PF12704 MacB-like periplasmic core domain BJD94_RS01155 PF02687 FtsX-like permease family BJD94_RS01160 PF00005 ABC transporter BJD94_RS01165 PF02687 FtsX-like permease family BJD94_RS01165 PF12704 MacB-like periplasmic core domain BJD94_RS01175 PF03772 Competence protein BJD94_RS01175 PF13567 Domain of unknown function (DUF4131) BJD94_RS01175 PF00753 Metallo-beta-lactamase superfamily BJD94_RS01180 PF00664 ABC transporter transmembrane region BJD94_RS01180 PF00005 ABC transporter BJD94_RS01185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BJD94_RS01190 PF03966 Trm112p-like protein BJD94_RS01195 PF02348 Cytidylyltransferase BJD94_RS01200 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS01200 PF17155 Gammaproteobacterial periplasmic sensor domain BJD94_RS01205 PF04293 SpoVR like protein BJD94_RS01210 PF04285 Protein of unknown function (DUF444) BJD94_RS01215 PF06798 PrkA serine protein kinase C-terminal domain BJD94_RS01215 PF08298 PrkA AAA domain BJD94_RS01220 PF03887 YfbU domain BJD94_RS01230 PF04055 Radical SAM superfamily BJD94_RS01235 PF00672 HAMP domain BJD94_RS01235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS01245 PF01228 Glycine radical BJD94_RS01245 PF02901 Pyruvate formate lyase-like BJD94_RS01260 PF00005 ABC transporter BJD94_RS01265 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS01285 PF03372 Endonuclease/Exonuclease/phosphatase family BJD94_RS01290 PF02743 Cache domain BJD94_RS01290 PF00672 HAMP domain BJD94_RS01290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS01295 PF10689 Protein of unknown function (DUF2496) BJD94_RS01300 PF07445 Primosomal replication protein priC BJD94_RS01305 PF01925 Sulfite exporter TauE/SafE BJD94_RS01310 PF06733 DEAD_2 BJD94_RS01310 PF13307 Helicase C-terminal domain BJD94_RS01320 PF00849 RNA pseudouridylate synthase BJD94_RS01325 PF03971 Monomeric isocitrate dehydrogenase BJD94_RS01330 PF00313 'Cold-shock' DNA-binding domain BJD94_RS01335 PF02617 ATP-dependent Clp protease adaptor protein ClpS BJD94_RS01340 PF17871 AAA lid domain BJD94_RS01340 PF02861 Clp amino terminal domain, pathogenicity island component BJD94_RS01340 PF00004 ATPase family associated with various cellular activities (AAA) BJD94_RS01340 PF07724 AAA domain (Cdc48 subfamily) BJD94_RS01340 PF10431 C-terminal, D2-small domain, of ClpB protein BJD94_RS01345 PF01176 Translation initiation factor 1A / IF-1 BJD94_RS01350 PF04377 Arginine-tRNA-protein transferase, C terminus BJD94_RS01350 PF04376 Arginine-tRNA-protein transferase, N terminus BJD94_RS01355 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BJD94_RS01365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJD94_RS01370 PF10692 Protein of unknown function (DUF2498) BJD94_RS01375 PF01751 Toprim domain BJD94_RS01375 PF01131 DNA topoisomerase BJD94_RS01375 PF08272 Topoisomerase I zinc-ribbon-like BJD94_RS01375 PF01396 Topoisomerase DNA binding C4 zinc finger BJD94_RS01385 PF00483 Nucleotidyl transferase BJD94_RS01390 PF08323 Starch synthase catalytic domain BJD94_RS01390 PF00534 Glycosyl transferases group 1 BJD94_RS01395 PF00561 alpha/beta hydrolase fold BJD94_RS01410 PF04994 TfoX C-terminal domain BJD94_RS01410 PF04993 TfoX N-terminal domain BJD94_RS01415 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS01420 PF02613 Nitrate reductase delta subunit BJD94_RS01425 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS01425 PF00072 Response regulator receiver domain BJD94_RS01430 PF02698 DUF218 domain BJD94_RS01435 PF13847 Methyltransferase domain BJD94_RS01440 PF03882 MukF winged-helix domain BJD94_RS01440 PF17193 MukF C-terminal domain BJD94_RS01440 PF17192 MukF middle domain BJD94_RS01445 PF04288 MukE-like family BJD94_RS01450 PF04310 MukB N-terminal BJD94_RS01450 PF16330 MukB hinge domain BJD94_RS01455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BJD94_RS01455 PF12833 Helix-turn-helix domain BJD94_RS01460 PF00171 Aldehyde dehydrogenase family BJD94_RS01465 PF05199 GMC oxidoreductase BJD94_RS01465 PF00732 GMC oxidoreductase BJD94_RS01480 PF08443 RimK-like ATP-grasp domain BJD94_RS01480 PF18030 RimK PreATP-grasp domain BJD94_RS01485 PF08003 Protein of unknown function (DUF1698) BJD94_RS01495 PF13649 Methyltransferase domain BJD94_RS01505 PF01336 OB-fold nucleic acid binding domain BJD94_RS01505 PF00152 tRNA synthetases class II (D, K and N) BJD94_RS01505 PF02938 GAD domain BJD94_RS01510 PF02075 Crossover junction endodeoxyribonuclease RuvC BJD94_RS01515 PF07499 RuvA, C-terminal domain BJD94_RS01515 PF01330 RuvA N terminal domain BJD94_RS01520 PF05496 Holliday junction DNA helicase RuvB P-loop domain BJD94_RS01520 PF05491 RuvB C-terminal winged helix domain BJD94_RS01520 PF17864 RuvB AAA lid domain BJD94_RS01525 PF01654 Cytochrome bd terminal oxidase subunit I BJD94_RS01530 PF02322 Cytochrome bd terminal oxidase subunit II BJD94_RS01535 PF08173 Membrane bound YbgT-like protein BJD94_RS01545 PF03061 Thioesterase superfamily BJD94_RS01550 PF01618 MotA/TolQ/ExbB proton channel family BJD94_RS01555 PF02472 Biopolymer transport protein ExbD/TolR BJD94_RS01565 PF04052 TolB amino-terminal domain BJD94_RS01565 PF07676 WD40-like Beta Propeller Repeat BJD94_RS01570 PF00691 OmpA family BJD94_RS01575 PF16331 TolA binding protein trimerisation BJD94_RS01575 PF13174 Tetratricopeptide repeat BJD94_RS01580 PF02445 Quinolinate synthetase A protein BJD94_RS01590 PF03994 Domain of Unknown Function (DUF350) BJD94_RS01600 PF03738 Glutathionylspermidine synthase preATP-grasp BJD94_RS01610 PF00072 Response regulator receiver domain BJD94_RS01610 PF09308 LuxQ, periplasmic BJD94_RS01610 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS01615 PF06610 L-alanine exporter BJD94_RS01685 PF02384 N-6 DNA Methylase BJD94_RS01690 PF06250 YhcG PDDEXK nuclease domain BJD94_RS01690 PF17761 DUF1016 N-terminal domain BJD94_RS01695 PF01420 Type I restriction modification DNA specificity domain BJD94_RS01705 PF18766 SWI2/SNF2 ATPase BJD94_RS01705 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BJD94_RS01705 PF11867 Domain of unknown function (DUF3387) BJD94_RS01725 PF04229 GrpB protein BJD94_RS01740 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS01745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS01745 PF00672 HAMP domain BJD94_RS01745 PF02743 Cache domain BJD94_RS01750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD94_RS01750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD94_RS01755 PF03741 Integral membrane protein TerC family BJD94_RS01775 PF02311 AraC-like ligand binding domain BJD94_RS01775 PF12833 Helix-turn-helix domain BJD94_RS01780 PF01740 STAS domain BJD94_RS01780 PF00916 Sulfate permease family BJD94_RS01790 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS01790 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS01790 PF00563 EAL domain BJD94_RS01795 PF08497 Radical SAM N-terminal BJD94_RS01795 PF11842 Domain of unknown function (DUF3362) BJD94_RS01795 PF04055 Radical SAM superfamily BJD94_RS01800 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS01800 PF00563 EAL domain BJD94_RS01800 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS01805 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS01805 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS01805 PF00563 EAL domain BJD94_RS01820 PF03466 LysR substrate binding domain BJD94_RS01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS01825 PF08267 Cobalamin-independent synthase, N-terminal domain BJD94_RS01825 PF01717 Cobalamin-independent synthase, Catalytic domain BJD94_RS01830 PF07085 DRTGG domain BJD94_RS01830 PF01515 Phosphate acetyl/butaryl transferase BJD94_RS01835 PF00871 Acetokinase family BJD94_RS01840 PF04217 Protein of unknown function, DUF412 BJD94_RS01850 PF02653 Branched-chain amino acid transport system / permease component BJD94_RS01855 PF00005 ABC transporter BJD94_RS01860 PF02903 Alpha amylase, N-terminal ig-like domain BJD94_RS01860 PF00128 Alpha amylase, catalytic domain BJD94_RS01865 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS01865 PF00072 Response regulator receiver domain BJD94_RS01870 PF01207 Dihydrouridine synthase (Dus) BJD94_RS01875 PF07517 SecA DEAD-like domain BJD94_RS01875 PF01043 SecA preprotein cross-linking domain BJD94_RS01875 PF07516 SecA Wing and Scaffold domain BJD94_RS01875 PF02810 SEC-C motif BJD94_RS01880 PF02600 Disulfide bond formation protein DsbB BJD94_RS01885 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BJD94_RS01890 PF00392 Bacterial regulatory proteins, gntR family BJD94_RS01890 PF07840 FadR C-terminal domain BJD94_RS01895 PF00925 GTP cyclohydrolase II BJD94_RS01920 PF01471 Putative peptidoglycan binding domain BJD94_RS01920 PF03734 L,D-transpeptidase catalytic domain BJD94_RS01925 PF05951 Bacterial protein of unknown function (DUF882) BJD94_RS01930 PF00753 Metallo-beta-lactamase superfamily BJD94_RS01945 PF03480 Bacterial extracellular solute-binding protein, family 7 BJD94_RS01955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BJD94_RS01960 PF17200 Single Cache domain 2 BJD94_RS01960 PF07730 Histidine kinase BJD94_RS01965 PF00072 Response regulator receiver domain BJD94_RS01965 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS01970 PF01047 MarR family BJD94_RS01975 PF02028 BCCT, betaine/carnitine/choline family transporter BJD94_RS01980 PF02743 Cache domain BJD94_RS01980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS01980 PF00672 HAMP domain BJD94_RS02000 PF00155 Aminotransferase class I and II BJD94_RS02005 PF00672 HAMP domain BJD94_RS02005 PF01966 HD domain BJD94_RS02020 PF00152 tRNA synthetases class II (D, K and N) BJD94_RS02020 PF01336 OB-fold nucleic acid binding domain BJD94_RS02025 PF17200 Single Cache domain 2 BJD94_RS02025 PF00672 HAMP domain BJD94_RS02025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS02030 PF01242 6-pyruvoyl tetrahydropterin synthase BJD94_RS02040 PF00563 EAL domain BJD94_RS02040 PF04940 Sensors of blue-light using FAD BJD94_RS02045 PF03313 Serine dehydratase alpha chain BJD94_RS02045 PF03315 Serine dehydratase beta chain BJD94_RS02050 PF03222 Tryptophan/tyrosine permease family BJD94_RS02055 PF00293 NUDIX domain BJD94_RS02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS02065 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS02065 PF00072 Response regulator receiver domain BJD94_RS02065 PF09308 LuxQ, periplasmic BJD94_RS02070 PF04715 Anthranilate synthase component I, N terminal region BJD94_RS02070 PF00425 chorismate binding enzyme BJD94_RS02085 PF04317 YcjX-like family, DUF463 BJD94_RS02090 PF05128 Domain of unknown function (DUF697) BJD94_RS02095 PF13188 PAS domain BJD94_RS02095 PF00158 Sigma-54 interaction domain BJD94_RS02095 PF18024 Helix-turn-helix domain BJD94_RS02100 PF13302 Acetyltransferase (GNAT) domain BJD94_RS02115 PF00939 Sodium:sulfate symporter transmembrane region BJD94_RS02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS02120 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS02120 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS02135 PF00563 EAL domain BJD94_RS02135 PF05231 MASE1 BJD94_RS02145 PF11871 Domain of unknown function (DUF3391) BJD94_RS02145 PF01966 HD domain BJD94_RS02150 PF13188 PAS domain BJD94_RS02150 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS02150 PF00563 EAL domain BJD94_RS02150 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS02155 PF11230 Protein of unknown function (DUF3029) BJD94_RS02160 PF04055 Radical SAM superfamily BJD94_RS02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS02165 PF03466 LysR substrate binding domain BJD94_RS02180 PF01966 HD domain BJD94_RS02190 PF01734 Patatin-like phospholipase BJD94_RS02200 PF00781 Diacylglycerol kinase catalytic domain BJD94_RS02205 PF03222 Tryptophan/tyrosine permease family BJD94_RS02210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS02215 PF00072 Response regulator receiver domain BJD94_RS02220 PF00210 Ferritin-like domain BJD94_RS02235 PF00005 ABC transporter BJD94_RS02235 PF00664 ABC transporter transmembrane region BJD94_RS02240 PF00005 ABC transporter BJD94_RS02240 PF00664 ABC transporter transmembrane region BJD94_RS02245 PF01235 Sodium:alanine symporter family BJD94_RS02250 PF02397 Bacterial sugar transferase BJD94_RS02260 PF10531 SLBB domain BJD94_RS02260 PF02563 Polysaccharide biosynthesis/export protein BJD94_RS02260 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BJD94_RS02285 PF00534 Glycosyl transferases group 1 BJD94_RS02285 PF13439 Glycosyltransferase Family 4 BJD94_RS02290 PF13439 Glycosyltransferase Family 4 BJD94_RS02290 PF00534 Glycosyl transferases group 1 BJD94_RS02300 PF08532 Beta-galactosidase trimerisation domain BJD94_RS02300 PF08533 Beta-galactosidase C-terminal domain BJD94_RS02300 PF02449 Beta-galactosidase BJD94_RS02305 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS02315 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS02315 PF00563 EAL domain BJD94_RS02315 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS02330 PF00012 Hsp70 protein BJD94_RS02335 PF00012 Hsp70 protein BJD94_RS02345 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS02365 PF06629 MltA-interacting protein MipA BJD94_RS02395 PF04972 BON domain BJD94_RS02395 PF13629 Pilus formation protein N terminal region BJD94_RS02395 PF00263 Bacterial type II and III secretion system protein BJD94_RS02405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BJD94_RS02410 PF00437 Type II/IV secretion system protein BJD94_RS02445 PF02525 Flavodoxin-like fold BJD94_RS02460 PF04408 Helicase associated domain (HA2) BJD94_RS02460 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BJD94_RS02460 PF00271 Helicase conserved C-terminal domain BJD94_RS02460 PF00270 DEAD/DEAH box helicase BJD94_RS02460 PF11898 Domain of unknown function (DUF3418) BJD94_RS02485 PF00561 alpha/beta hydrolase fold BJD94_RS02490 PF03280 Proteobacterial lipase chaperone protein BJD94_RS02495 PF07690 Major Facilitator Superfamily BJD94_RS02500 PF00491 Arginase family BJD94_RS02505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJD94_RS02505 PF17810 Arginine decarboxylase helical bundle domain BJD94_RS02505 PF17944 Arginine decarboxylase C-terminal helical extension BJD94_RS02565 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS02565 PF00072 Response regulator receiver domain BJD94_RS02570 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BJD94_RS02570 PF01409 tRNA synthetases class II core domain (F) BJD94_RS02575 PF03483 B3/4 domain BJD94_RS02575 PF03484 tRNA synthetase B5 domain BJD94_RS02575 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BJD94_RS02575 PF03147 Ferredoxin-fold anticodon binding domain BJD94_RS02575 PF01588 Putative tRNA binding domain BJD94_RS02580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BJD94_RS02580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BJD94_RS02595 PF00216 Bacterial DNA-binding protein BJD94_RS02605 PF05724 Thiopurine S-methyltransferase (TPMT) BJD94_RS02610 PF02222 ATP-grasp domain BJD94_RS02615 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BJD94_RS02615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BJD94_RS02630 PF00691 OmpA family BJD94_RS02630 PF13488 Glycine zipper BJD94_RS02645 PF02913 FAD linked oxidases, C-terminal domain BJD94_RS02645 PF01565 FAD binding domain BJD94_RS02645 PF13183 4Fe-4S dicluster domain BJD94_RS02655 PF00089 Trypsin BJD94_RS02665 PF00221 Aromatic amino acid lyase BJD94_RS02670 PF01175 Urocanase Rossmann-like domain BJD94_RS02670 PF17392 Urocanase C-terminal domain BJD94_RS02670 PF17391 Urocanase N-terminal domain BJD94_RS02675 PF00491 Arginase family BJD94_RS02680 PF01979 Amidohydrolase family BJD94_RS02685 PF07702 UTRA domain BJD94_RS02685 PF00392 Bacterial regulatory proteins, gntR family BJD94_RS02690 PF07070 SpoOM protein BJD94_RS02700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD94_RS02700 PF03129 Anticodon binding domain BJD94_RS02700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJD94_RS02700 PF02824 TGS domain BJD94_RS02705 PF05198 Translation initiation factor IF-3, N-terminal domain BJD94_RS02705 PF00707 Translation initiation factor IF-3, C-terminal domain BJD94_RS02710 PF01632 Ribosomal protein L35 BJD94_RS02715 PF00453 Ribosomal protein L20 BJD94_RS02720 PF13495 Phage integrase, N-terminal SAM-like domain BJD94_RS02720 PF00589 Phage integrase family BJD94_RS02840 PF09905 DNA-binding protein VF530 BJD94_RS03000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS03070 PF08378 Nuclease-related domain BJD94_RS03240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS03470 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system BJD94_RS03475 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BJD94_RS03535 PF04229 GrpB protein BJD94_RS03535 PF13673 Acetyltransferase (GNAT) domain BJD94_RS03615 PF02567 Phenazine biosynthesis-like protein BJD94_RS03675 PF13302 Acetyltransferase (GNAT) domain BJD94_RS03760 PF13274 Protein of unknown function (DUF4065) BJD94_RS03840 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BJD94_RS03845 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BJD94_RS03925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS04075 PF09905 DNA-binding protein VF530 BJD94_RS04165 PF07859 alpha/beta hydrolase fold BJD94_RS04310 PF09905 DNA-binding protein VF530 BJD94_RS04375 PF13302 Acetyltransferase (GNAT) domain BJD94_RS04455 PF01906 Putative heavy-metal-binding BJD94_RS04600 PF13649 Methyltransferase domain BJD94_RS04620 PF01906 Putative heavy-metal-binding BJD94_RS04795 PF08378 Nuclease-related domain BJD94_RS04805 PF13737 Transposase DDE domain BJD94_RS04835 PF01554 MatE BJD94_RS04840 PF00677 Lumazine binding domain BJD94_RS04850 PF03881 Fructosamine kinase BJD94_RS04855 PF00072 Response regulator receiver domain BJD94_RS04855 PF01339 CheB methylesterase BJD94_RS04860 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS04860 PF05230 MASE2 domain BJD94_RS04870 PF00877 NlpC/P60 family BJD94_RS04875 PF02743 Cache domain BJD94_RS04875 PF00672 HAMP domain BJD94_RS04875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS04885 PF03942 DTW domain BJD94_RS04890 PF00480 ROK family BJD94_RS04900 PF03453 MoeA N-terminal region (domain I and II) BJD94_RS04900 PF03454 MoeA C-terminal region (domain IV) BJD94_RS04900 PF00994 Probable molybdopterin binding domain BJD94_RS04905 PF12804 MobA-like NTP transferase domain BJD94_RS04910 PF08402 TOBE domain BJD94_RS04910 PF00005 ABC transporter BJD94_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS04920 PF12849 PBP superfamily domain BJD94_RS04925 PF02954 Bacterial regulatory protein, Fis family BJD94_RS04925 PF00072 Response regulator receiver domain BJD94_RS04925 PF00158 Sigma-54 interaction domain BJD94_RS04930 PF00989 PAS fold BJD94_RS04930 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS04930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS04945 PF00005 ABC transporter BJD94_RS04945 PF12848 ABC transporter BJD94_RS04950 PF02743 Cache domain BJD94_RS04950 PF00672 HAMP domain BJD94_RS04950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS04955 PF02634 FdhD/NarQ family BJD94_RS04985 PF00384 Molybdopterin oxidoreductase BJD94_RS04985 PF01568 Molydopterin dinucleotide binding domain BJD94_RS04985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJD94_RS04990 PF13247 4Fe-4S dicluster domain BJD94_RS05020 PF00909 Ammonium Transporter Family BJD94_RS05025 PF02146 Sir2 family BJD94_RS05030 PF13416 Bacterial extracellular solute-binding protein BJD94_RS05035 PF13416 Bacterial extracellular solute-binding protein BJD94_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS05050 PF00005 ABC transporter BJD94_RS05050 PF08402 TOBE domain BJD94_RS05060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BJD94_RS05070 PF01171 PP-loop family BJD94_RS05075 PF00582 Universal stress protein family BJD94_RS05080 PF13545 Crp-like helix-turn-helix domain BJD94_RS05080 PF00027 Cyclic nucleotide-binding domain BJD94_RS05095 PF00403 Heavy-metal-associated domain BJD94_RS05105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BJD94_RS05105 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BJD94_RS05120 PF00115 Cytochrome C and Quinol oxidase polypeptide I BJD94_RS05135 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS05135 PF00072 Response regulator receiver domain BJD94_RS05135 PF09308 LuxQ, periplasmic BJD94_RS05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS05155 PF17414 MatP C-terminal ribbon-helix-helix domain BJD94_RS05155 PF06303 MatP N-terminal domain BJD94_RS05160 PF05362 Lon protease (S16) C-terminal proteolytic domain BJD94_RS05160 PF13654 AAA domain BJD94_RS05165 PF07977 FabA-like domain BJD94_RS05170 PF04957 Ribosome modulation factor BJD94_RS05180 PF00005 ABC transporter BJD94_RS05180 PF16326 ABC transporter C-terminal domain BJD94_RS05180 PF12848 ABC transporter BJD94_RS05190 PF10672 S-adenosylmethionine-dependent methyltransferase BJD94_RS05190 PF01170 Putative RNA methylase family UPF0020 BJD94_RS05190 PF02926 THUMP domain BJD94_RS05195 PF07126 Cell-division protein ZapC BJD94_RS05200 PF01180 Dihydroorotate dehydrogenase BJD94_RS05205 PF05088 Bacterial NAD-glutamate dehydrogenase BJD94_RS05215 PF11940 Domain of unknown function (DUF3458) Ig-like fold BJD94_RS05215 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BJD94_RS05215 PF01433 Peptidase family M1 domain BJD94_RS05225 PF17804 Tail specific protease N-terminal domain BJD94_RS05225 PF11818 C-terminal domain of tail specific protease (DUF3340) BJD94_RS05225 PF03572 Peptidase family S41 BJD94_RS05225 PF00595 PDZ domain BJD94_RS05230 PF04352 ProQ/FINO family BJD94_RS05230 PF17516 ProQ C-terminal domain BJD94_RS05235 PF13185 GAF domain BJD94_RS05240 PF00005 ABC transporter BJD94_RS05240 PF00664 ABC transporter transmembrane region BJD94_RS05245 PF04403 Paraquat-inducible protein A BJD94_RS05250 PF02470 MlaD protein BJD94_RS05255 PF01189 16S rRNA methyltransferase RsmB/F BJD94_RS05255 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BJD94_RS05255 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BJD94_RS05260 PF13509 S1 domain BJD94_RS05260 PF17783 CvfB-like winged helix domain BJD94_RS05275 PF00793 DAHP synthetase I family BJD94_RS05280 PF04461 Protein of unknown function (DUF520) BJD94_RS05285 PF17158 Membrane-associated sensor, integral membrane domain BJD94_RS05285 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS05290 PF14743 DNA ligase OB-like domain BJD94_RS05290 PF01068 ATP dependent DNA ligase domain BJD94_RS05295 PF01740 STAS domain BJD94_RS05305 PF02563 Polysaccharide biosynthesis/export protein BJD94_RS05305 PF10531 SLBB domain BJD94_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS05320 PF00672 HAMP domain BJD94_RS05320 PF00072 Response regulator receiver domain BJD94_RS05320 PF01627 Hpt domain BJD94_RS05320 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS05320 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD94_RS05325 PF00158 Sigma-54 interaction domain BJD94_RS05325 PF00072 Response regulator receiver domain BJD94_RS05325 PF02954 Bacterial regulatory protein, Fis family BJD94_RS05370 PF00534 Glycosyl transferases group 1 BJD94_RS05370 PF13439 Glycosyltransferase Family 4 BJD94_RS05380 PF02397 Bacterial sugar transferase BJD94_RS05415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD94_RS05415 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BJD94_RS05420 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BJD94_RS05425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BJD94_RS05425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BJD94_RS05430 PF12431 Transcriptional regulator BJD94_RS05430 PF00072 Response regulator receiver domain BJD94_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS05435 PF17203 Single cache domain 3 BJD94_RS05435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BJD94_RS05435 PF00989 PAS fold BJD94_RS05450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS05475 PF01235 Sodium:alanine symporter family BJD94_RS05485 PF01810 LysE type translocator BJD94_RS05490 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BJD94_RS05495 PF01553 Acyltransferase BJD94_RS05500 PF13237 4Fe-4S dicluster domain BJD94_RS05500 PF12801 4Fe-4S binding domain BJD94_RS05505 PF12838 4Fe-4S dicluster domain BJD94_RS05505 PF12800 4Fe-4S binding domain BJD94_RS05510 PF10414 Sirohaem synthase dimerisation region BJD94_RS05510 PF14824 Sirohaem biosynthesis protein central BJD94_RS05510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD94_RS05515 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS05520 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS05525 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS05530 PF00005 ABC transporter BJD94_RS05535 PF01027 Inhibitor of apoptosis-promoting Bax1 BJD94_RS05545 PF04358 DsrC like protein BJD94_RS05550 PF00708 Acylphosphatase BJD94_RS05555 PF00672 HAMP domain BJD94_RS05555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS05555 PF02743 Cache domain BJD94_RS05560 PF10672 S-adenosylmethionine-dependent methyltransferase BJD94_RS05560 PF17785 PUA-like domain BJD94_RS05585 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS05585 PF17151 Periplasmic sensor domain BJD94_RS05590 PF06508 Queuosine biosynthesis protein QueC BJD94_RS05595 PF04055 Radical SAM superfamily BJD94_RS05605 PF02743 Cache domain BJD94_RS05605 PF00672 HAMP domain BJD94_RS05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS05615 PF00089 Trypsin BJD94_RS05625 PF16177 Acetyl-coenzyme A synthetase N-terminus BJD94_RS05625 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS05625 PF00501 AMP-binding enzyme BJD94_RS05630 PF04303 PrpF protein BJD94_RS05635 PF00694 Aconitase C-terminal domain BJD94_RS05635 PF00330 Aconitase family (aconitate hydratase) BJD94_RS05640 PF00285 Citrate synthase, C-terminal domain BJD94_RS05665 PF01970 Tripartite tricarboxylate transporter TctA family BJD94_RS05690 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS05690 PF00072 Response regulator receiver domain BJD94_RS05700 PF01925 Sulfite exporter TauE/SafE BJD94_RS05705 PF02743 Cache domain BJD94_RS05705 PF00672 HAMP domain BJD94_RS05705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS05715 PF13416 Bacterial extracellular solute-binding protein BJD94_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS05725 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS05730 PF00005 ABC transporter BJD94_RS05730 PF17912 MalK OB fold domain BJD94_RS05735 PF00455 DeoR C terminal sensor domain BJD94_RS05735 PF08220 DeoR-like helix-turn-helix domain BJD94_RS05740 PF03009 Glycerophosphoryl diester phosphodiesterase family BJD94_RS05745 PF00141 Peroxidase BJD94_RS05755 PF00313 'Cold-shock' DNA-binding domain BJD94_RS05760 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS05760 PF17151 Periplasmic sensor domain BJD94_RS05795 PF14497 Glutathione S-transferase, C-terminal domain BJD94_RS05795 PF02798 Glutathione S-transferase, N-terminal domain BJD94_RS05805 PF04209 homogentisate 1,2-dioxygenase BJD94_RS05810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS05815 PF07687 Peptidase dimerisation domain BJD94_RS05815 PF01546 Peptidase family M20/M25/M40 BJD94_RS05820 PF02872 5'-nucleotidase, C-terminal domain BJD94_RS05820 PF00149 Calcineurin-like phosphoesterase BJD94_RS05825 PF04204 Homoserine O-succinyltransferase BJD94_RS05840 PF05971 RNA methyltransferase BJD94_RS05845 PF01863 Protein of unknown function DUF45 BJD94_RS05855 PF03466 LysR substrate binding domain BJD94_RS05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS05860 PF07690 Major Facilitator Superfamily BJD94_RS05875 PF00005 ABC transporter BJD94_RS05880 PF01032 FecCD transport family BJD94_RS05885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BJD94_RS05900 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BJD94_RS05905 PF02654 Cobalamin-5-phosphate synthase BJD94_RS05910 PF02277 Phosphoribosyltransferase BJD94_RS05925 PF08411 Exonuclease C-terminal BJD94_RS05925 PF00929 Exonuclease BJD94_RS05930 PF03788 LrgA family BJD94_RS05935 PF04172 LrgB-like family BJD94_RS05945 PF01259 SAICAR synthetase BJD94_RS05955 PF02253 Phospholipase A1 BJD94_RS05960 PF08482 ATP-dependent helicase C-terminal BJD94_RS05960 PF00271 Helicase conserved C-terminal domain BJD94_RS05960 PF04408 Helicase associated domain (HA2) BJD94_RS05960 PF00270 DEAD/DEAH box helicase BJD94_RS05965 PF00390 Malic enzyme, N-terminal domain BJD94_RS05965 PF03949 Malic enzyme, NAD binding domain BJD94_RS05970 PF02698 DUF218 domain BJD94_RS05975 PF00939 Sodium:sulfate symporter transmembrane region BJD94_RS05980 PF00072 Response regulator receiver domain BJD94_RS05980 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS05990 PF00266 Aminotransferase class-V BJD94_RS06000 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS06005 PF00005 ABC transporter BJD94_RS06005 PF00664 ABC transporter transmembrane region BJD94_RS06010 PF00664 ABC transporter transmembrane region BJD94_RS06010 PF00005 ABC transporter BJD94_RS06015 PF00266 Aminotransferase class-V BJD94_RS06025 PF13426 PAS domain BJD94_RS06025 PF13188 PAS domain BJD94_RS06025 PF00989 PAS fold BJD94_RS06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS06025 PF13426 PAS domain BJD94_RS06025 PF13188 PAS domain BJD94_RS06025 PF00989 PAS fold BJD94_RS06025 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS06025 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS06040 PF04993 TfoX N-terminal domain BJD94_RS06040 PF04994 TfoX C-terminal domain BJD94_RS06050 PF03956 Lysine exporter LysO BJD94_RS06060 PF00282 Pyridoxal-dependent decarboxylase conserved domain BJD94_RS06065 PF01380 SIS domain BJD94_RS06065 PF01418 Helix-turn-helix domain, rpiR family BJD94_RS06070 PF00465 Iron-containing alcohol dehydrogenase BJD94_RS06075 PF00462 Glutaredoxin BJD94_RS06080 PF06826 Predicted Permease Membrane Region BJD94_RS06080 PF02080 TrkA-C domain BJD94_RS06085 PF07055 Enoyl reductase FAD binding domain BJD94_RS06085 PF12241 Trans-2-enoyl-CoA reductase catalytic region BJD94_RS06085 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BJD94_RS06090 PF09317 Domain of unknown function (DUF1974) BJD94_RS06090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD94_RS06090 PF02770 Acyl-CoA dehydrogenase, middle domain BJD94_RS06090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD94_RS06100 PF06965 Na+/H+ antiporter 1 BJD94_RS06115 PF00005 ABC transporter BJD94_RS06120 PF13460 NAD(P)H-binding BJD94_RS06120 PF11066 Protein of unknown function (DUF2867) BJD94_RS06130 PF07690 Major Facilitator Superfamily BJD94_RS06135 PF00849 RNA pseudouridylate synthase BJD94_RS06135 PF01479 S4 domain BJD94_RS06140 PF04851 Type III restriction enzyme, res subunit BJD94_RS06140 PF00271 Helicase conserved C-terminal domain BJD94_RS06150 PF00072 Response regulator receiver domain BJD94_RS06150 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS06155 PF00672 HAMP domain BJD94_RS06155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS06155 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS06160 PF01386 Ribosomal L25p family BJD94_RS06175 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS06175 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS06175 PF00563 EAL domain BJD94_RS06190 PF06945 Protein of unknown function (DUF1289) BJD94_RS06200 PF13416 Bacterial extracellular solute-binding protein BJD94_RS06205 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS06210 PF00005 ABC transporter BJD94_RS06215 PF01066 CDP-alcohol phosphatidyltransferase BJD94_RS06220 PF00158 Sigma-54 interaction domain BJD94_RS06220 PF01590 GAF domain BJD94_RS06225 PF03063 Prismane/CO dehydrogenase family BJD94_RS06230 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD94_RS06230 PF00970 Oxidoreductase FAD-binding domain BJD94_RS06230 PF00175 Oxidoreductase NAD-binding domain BJD94_RS06240 PF00849 RNA pseudouridylate synthase BJD94_RS06245 PF12729 Four helix bundle sensory module for signal transduction BJD94_RS06245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS06245 PF00672 HAMP domain BJD94_RS06250 PF00209 Sodium:neurotransmitter symporter family BJD94_RS06255 PF13091 PLD-like domain BJD94_RS06255 PF13396 Phospholipase_D-nuclease N-terminal BJD94_RS06260 PF01053 Cys/Met metabolism PLP-dependent enzyme BJD94_RS06265 PF03352 Methyladenine glycosylase BJD94_RS06270 PF00873 AcrB/AcrD/AcrF family BJD94_RS06275 PF13533 Biotin-lipoyl like BJD94_RS06285 PF04024 PspC domain BJD94_RS06290 PF06667 Phage shock protein B BJD94_RS06295 PF04012 PspA/IM30 family BJD94_RS06300 PF02954 Bacterial regulatory protein, Fis family BJD94_RS06300 PF00158 Sigma-54 interaction domain BJD94_RS06305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS06315 PF12911 N-terminal TM domain of oligopeptide transport permease C BJD94_RS06320 PF00005 ABC transporter BJD94_RS06320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS06325 PF00005 ABC transporter BJD94_RS06350 PF01368 DHH family BJD94_RS06350 PF02833 DHHA2 domain BJD94_RS06360 PF16875 Glycosyl hydrolase family 36 N-terminal domain BJD94_RS06360 PF16874 Glycosyl hydrolase family 36 C-terminal domain BJD94_RS06380 PF00384 Molybdopterin oxidoreductase BJD94_RS06380 PF18364 Molybdopterin oxidoreductase N-terminal domain BJD94_RS06380 PF01568 Molydopterin dinucleotide binding domain BJD94_RS06385 PF03264 NapC/NirT cytochrome c family, N-terminal region BJD94_RS06390 PF06796 Periplasmic nitrate reductase protein NapE BJD94_RS06395 PF03649 Uncharacterised protein family (UPF0014) BJD94_RS06400 PF01226 Formate/nitrite transporter BJD94_RS06420 PF03466 LysR substrate binding domain BJD94_RS06420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS06425 PF01370 NAD dependent epimerase/dehydratase family BJD94_RS06435 PF00265 Thymidine kinase BJD94_RS06440 PF09190 DALR domain BJD94_RS06440 PF01406 tRNA synthetases class I (C) catalytic domain BJD94_RS06445 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJD94_RS06450 PF00149 Calcineurin-like phosphoesterase BJD94_RS06455 PF00563 EAL domain BJD94_RS06455 PF08668 HDOD domain BJD94_RS06460 PF02810 SEC-C motif BJD94_RS06465 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BJD94_RS06465 PF01502 Phosphoribosyl-AMP cyclohydrolase BJD94_RS06470 PF00977 Histidine biosynthesis protein BJD94_RS06475 PF00977 Histidine biosynthesis protein BJD94_RS06480 PF00117 Glutamine amidotransferase class-I BJD94_RS06485 PF08645 Polynucleotide kinase 3 phosphatase BJD94_RS06485 PF00475 Imidazoleglycerol-phosphate dehydratase BJD94_RS06490 PF00155 Aminotransferase class I and II BJD94_RS06495 PF00815 Histidinol dehydrogenase BJD94_RS06500 PF01634 ATP phosphoribosyltransferase BJD94_RS06500 PF08029 HisG, C-terminal domain BJD94_RS06505 PF03553 Na+/H+ antiporter family BJD94_RS06510 PF00816 H-NS histone family BJD94_RS06515 PF00294 pfkB family carbohydrate kinase BJD94_RS06530 PF04356 Protein of unknown function (DUF489) BJD94_RS06535 PF08328 Adenylosuccinate lyase C-terminal BJD94_RS06535 PF00206 Lyase BJD94_RS06580 PF01435 Peptidase family M48 BJD94_RS06590 PF08241 Methyltransferase domain BJD94_RS06595 PF00155 Aminotransferase class I and II BJD94_RS06600 PF06968 Biotin and Thiamin Synthesis associated domain BJD94_RS06600 PF04055 Radical SAM superfamily BJD94_RS06605 PF00202 Aminotransferase class-III BJD94_RS06610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD94_RS06610 PF02403 Seryl-tRNA synthetase N-terminal domain BJD94_RS06615 PF12002 MgsA AAA+ ATPase C terminal BJD94_RS06615 PF16193 AAA C-terminal domain BJD94_RS06615 PF00004 ATPase family associated with various cellular activities (AAA) BJD94_RS06620 PF03548 Outer membrane lipoprotein carrier protein LolA BJD94_RS06625 PF01580 FtsK/SpoIIIE family BJD94_RS06625 PF09397 Ftsk gamma domain BJD94_RS06625 PF17854 FtsK alpha domain BJD94_RS06625 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BJD94_RS06630 PF01037 Lrp/AsnC ligand binding domain BJD94_RS06635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BJD94_RS06635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BJD94_RS06645 PF03466 LysR substrate binding domain BJD94_RS06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS06655 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BJD94_RS06670 PF00005 ABC transporter BJD94_RS06670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS06675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS06675 PF00005 ABC transporter BJD94_RS06680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS06685 PF12911 N-terminal TM domain of oligopeptide transport permease C BJD94_RS06690 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS06695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BJD94_RS06700 PF18073 Rubredoxin metal binding domain BJD94_RS06705 PF06305 Lipopolysaccharide assembly protein A domain BJD94_RS06710 PF00216 Bacterial DNA-binding protein BJD94_RS06715 PF00575 S1 RNA binding domain BJD94_RS06720 PF02224 Cytidylate kinase BJD94_RS06725 PF08496 Peptidase family S49 N-terminal BJD94_RS06725 PF01343 Peptidase family S49 BJD94_RS06730 PF00106 short chain dehydrogenase BJD94_RS06745 PF02811 PHP domain BJD94_RS06745 PF01336 OB-fold nucleic acid binding domain BJD94_RS06745 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJD94_RS06745 PF14579 Helix-hairpin-helix motif BJD94_RS06745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJD94_RS06750 PF01584 CheW-like domain BJD94_RS06750 PF00072 Response regulator receiver domain BJD94_RS06755 PF00480 ROK family BJD94_RS06760 PF00224 Pyruvate kinase, barrel domain BJD94_RS06760 PF02887 Pyruvate kinase, alpha/beta domain BJD94_RS06765 PF01734 Patatin-like phospholipase BJD94_RS06780 PF00209 Sodium:neurotransmitter symporter family BJD94_RS06795 PF02378 Phosphotransferase system, EIIC BJD94_RS06795 PF00367 phosphotransferase system, EIIB BJD94_RS06800 PF01026 TatD related DNase BJD94_RS06805 PF09115 DNA polymerase III, delta subunit, C terminal BJD94_RS06810 PF02223 Thymidylate kinase BJD94_RS06815 PF02618 YceG-like family BJD94_RS06820 PF01063 Amino-transferase class IV BJD94_RS06825 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD94_RS06825 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD94_RS06830 PF00550 Phosphopantetheine attachment site BJD94_RS06840 PF00698 Acyl transferase domain BJD94_RS06845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD94_RS06845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD94_RS06850 PF02504 Fatty acid synthesis protein BJD94_RS06855 PF01783 Ribosomal L32p protein family BJD94_RS06860 PF02620 Large ribosomal RNA subunit accumulation protein YceD BJD94_RS06865 PF02545 Maf-like protein BJD94_RS06870 PF00849 RNA pseudouridylate synthase BJD94_RS06870 PF01479 S4 domain BJD94_RS06875 PF00575 S1 RNA binding domain BJD94_RS06875 PF10150 Ribonuclease E/G family BJD94_RS06875 PF12111 Polyribonucleotide phosphorylase C terminal BJD94_RS06880 PF01740 STAS domain BJD94_RS06880 PF00916 Sulfate permease family BJD94_RS06885 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJD94_RS06890 PF12557 Cob(I)alamin adenosyltransferase N terminal BJD94_RS06890 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BJD94_RS06900 PF00485 Phosphoribulokinase / Uridine kinase family BJD94_RS06905 PF10609 NUBPL iron-transfer P-loop NTPase BJD94_RS06910 PF09334 tRNA synthetases class I (M) BJD94_RS06910 PF01588 Putative tRNA binding domain BJD94_RS06920 PF03918 Cytochrome C biogenesis protein BJD94_RS06925 PF08534 Redoxin BJD94_RS06930 PF01578 Cytochrome C assembly protein BJD94_RS06930 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BJD94_RS06935 PF03916 Polysulphide reductase, NrfD BJD94_RS06940 PF13247 4Fe-4S dicluster domain BJD94_RS06950 PF02335 Cytochrome c552 BJD94_RS06965 PF03989 DNA gyrase C-terminal domain, beta-propeller BJD94_RS06965 PF00521 DNA gyrase/topoisomerase IV, subunit A BJD94_RS06980 PF02867 Ribonucleotide reductase, barrel domain BJD94_RS06980 PF00317 Ribonucleotide reductase, all-alpha domain BJD94_RS06980 PF03477 ATP cone domain BJD94_RS06985 PF00268 Ribonucleotide reductase, small chain BJD94_RS06995 PF00994 Probable molybdopterin binding domain BJD94_RS07015 PF03435 Saccharopine dehydrogenase NADP binding domain BJD94_RS07015 PF16653 Saccharopine dehydrogenase C-terminal domain BJD94_RS07020 PF00202 Aminotransferase class-III BJD94_RS07045 PF01066 CDP-alcohol phosphatidyltransferase BJD94_RS07050 PF01541 GIY-YIG catalytic domain BJD94_RS07050 PF08459 UvrC Helix-hairpin-helix N-terminal BJD94_RS07050 PF02151 UvrB/uvrC motif BJD94_RS07055 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS07055 PF00072 Response regulator receiver domain BJD94_RS07060 PF03104 DNA polymerase family B, exonuclease domain BJD94_RS07060 PF00136 DNA polymerase family B BJD94_RS07065 PF00563 EAL domain BJD94_RS07065 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS07065 PF08447 PAS fold BJD94_RS07065 PF08448 PAS fold BJD94_RS07075 PF01132 Elongation factor P (EF-P) OB domain BJD94_RS07075 PF08207 Elongation factor P (EF-P) KOW-like domain BJD94_RS07075 PF09285 Elongation factor P, C-terminal BJD94_RS07080 PF04269 Protein of unknown function, DUF440 BJD94_RS07085 PF00849 RNA pseudouridylate synthase BJD94_RS07085 PF01479 S4 domain BJD94_RS07095 PF01300 Telomere recombination BJD94_RS07100 PF02811 PHP domain BJD94_RS07105 PF08056 Tryptophan operon leader peptide BJD94_RS07110 PF00425 chorismate binding enzyme BJD94_RS07110 PF04715 Anthranilate synthase component I, N terminal region BJD94_RS07115 PF00117 Glutamine amidotransferase class-I BJD94_RS07120 PF00591 Glycosyl transferase family, a/b domain BJD94_RS07120 PF02885 Glycosyl transferase family, helical bundle domain BJD94_RS07125 PF00218 Indole-3-glycerol phosphate synthase BJD94_RS07125 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BJD94_RS07130 PF00291 Pyridoxal-phosphate dependent enzyme BJD94_RS07135 PF00290 Tryptophan synthase alpha chain BJD94_RS07140 PF00375 Sodium:dicarboxylate symporter family BJD94_RS07150 PF04279 Intracellular septation protein A BJD94_RS07155 PF03061 Thioesterase superfamily BJD94_RS07160 PF03795 YCII-related domain BJD94_RS07170 PF13409 Glutathione S-transferase, N-terminal domain BJD94_RS07175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS07175 PF00005 ABC transporter BJD94_RS07180 PF00005 ABC transporter BJD94_RS07180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS07185 PF12911 N-terminal TM domain of oligopeptide transport permease C BJD94_RS07190 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS07195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS07200 PF02391 MoaE protein BJD94_RS07205 PF02597 ThiS family BJD94_RS07210 PF01967 MoaC family BJD94_RS07215 PF00994 Probable molybdopterin binding domain BJD94_RS07220 PF04055 Radical SAM superfamily BJD94_RS07220 PF06463 Molybdenum Cofactor Synthesis C BJD94_RS07225 PF01933 Uncharacterised protein family UPF0052 BJD94_RS07230 PF01627 Hpt domain BJD94_RS07235 PF00072 Response regulator receiver domain BJD94_RS07235 PF02954 Bacterial regulatory protein, Fis family BJD94_RS07235 PF00158 Sigma-54 interaction domain BJD94_RS07240 PF17757 UvrB interaction domain BJD94_RS07240 PF00271 Helicase conserved C-terminal domain BJD94_RS07240 PF04851 Type III restriction enzyme, res subunit BJD94_RS07240 PF02151 UvrB/uvrC motif BJD94_RS07240 PF12344 Ultra-violet resistance protein B BJD94_RS07255 PF02508 Rnf-Nqr subunit, membrane protein BJD94_RS07260 PF04060 Putative Fe-S cluster BJD94_RS07265 PF10531 SLBB domain BJD94_RS07265 PF13375 RnfC Barrel sandwich hybrid domain BJD94_RS07265 PF12838 4Fe-4S dicluster domain BJD94_RS07265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BJD94_RS07270 PF03116 NQR2, RnfD, RnfE family BJD94_RS07275 PF04205 FMN-binding domain BJD94_RS07280 PF02508 Rnf-Nqr subunit, membrane protein BJD94_RS07285 PF10576 Iron-sulfur binding domain of endonuclease III BJD94_RS07285 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD94_RS07285 PF00633 Helix-hairpin-helix motif BJD94_RS07290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS07295 PF10952 Protein of unknown function (DUF2753) BJD94_RS07300 PF00691 OmpA family BJD94_RS07300 PF18393 MotY N-terminal domain BJD94_RS07305 PF00929 Exonuclease BJD94_RS07310 PF13726 Na+-H+ antiporter family BJD94_RS07310 PF03553 Na+/H+ antiporter family BJD94_RS07320 PF00462 Glutaredoxin BJD94_RS07325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BJD94_RS07325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BJD94_RS07340 PF00465 Iron-containing alcohol dehydrogenase BJD94_RS07340 PF00171 Aldehyde dehydrogenase family BJD94_RS07345 PF01914 MarC family integral membrane protein BJD94_RS07350 PF00520 Ion transport protein BJD94_RS07350 PF00027 Cyclic nucleotide-binding domain BJD94_RS07360 PF02774 Semialdehyde dehydrogenase, dimerisation domain BJD94_RS07360 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJD94_RS07365 PF03553 Na+/H+ antiporter family BJD94_RS07380 PF04245 37-kD nucleoid-associated bacterial protein BJD94_RS07385 PF07208 Protein of unknown function (DUF1414) BJD94_RS07390 PF11893 Domain of unknown function (DUF3413) BJD94_RS07390 PF00884 Sulfatase BJD94_RS07400 PF02080 TrkA-C domain BJD94_RS07400 PF02254 TrkA-N domain BJD94_RS07405 PF02386 Cation transport protein BJD94_RS07410 PF04074 YhcH/YjgK/YiaL BJD94_RS07420 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS07420 PF00072 Response regulator receiver domain BJD94_RS07425 PF00072 Response regulator receiver domain BJD94_RS07425 PF09308 LuxQ, periplasmic BJD94_RS07425 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS07430 PF00850 Histone deacetylase domain BJD94_RS07435 PF01131 DNA topoisomerase BJD94_RS07435 PF01751 Toprim domain BJD94_RS07440 PF00881 Nitroreductase family BJD94_RS07445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD94_RS07445 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS07450 PF01343 Peptidase family S49 BJD94_RS07455 PF00710 Asparaginase, N-terminal BJD94_RS07455 PF17763 Glutaminase/Asparaginase C-terminal domain BJD94_RS07460 PF07023 Protein of unknown function (DUF1315) BJD94_RS07470 PF01641 SelR domain BJD94_RS07475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD94_RS07475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJD94_RS07480 PF01263 Aldose 1-epimerase BJD94_RS07485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS07485 PF02743 Cache domain BJD94_RS07485 PF00672 HAMP domain BJD94_RS07500 PF07969 Amidohydrolase family BJD94_RS07505 PF06965 Na+/H+ antiporter 1 BJD94_RS07510 PF01145 SPFH domain / Band 7 family BJD94_RS07515 PF01145 SPFH domain / Band 7 family BJD94_RS07535 PF00563 EAL domain BJD94_RS07535 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS07535 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS07545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BJD94_RS07550 PF09619 Type III secretion system lipoprotein chaperone (YscW) BJD94_RS07565 PF13404 AsnC-type helix-turn-helix domain BJD94_RS07565 PF01037 Lrp/AsnC ligand binding domain BJD94_RS07570 PF00291 Pyridoxal-phosphate dependent enzyme BJD94_RS07600 PF00873 AcrB/AcrD/AcrF family BJD94_RS07605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS07650 PF07690 Major Facilitator Superfamily BJD94_RS07655 PF03601 Conserved hypothetical protein 698 BJD94_RS07660 PF00501 AMP-binding enzyme BJD94_RS07660 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS07665 PF13378 Enolase C-terminal domain-like BJD94_RS07670 PF00378 Enoyl-CoA hydratase/isomerase BJD94_RS07675 PF12697 Alpha/beta hydrolase family BJD94_RS07680 PF16582 Middle domain of thiamine pyrophosphate BJD94_RS07680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJD94_RS07680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJD94_RS07685 PF00425 chorismate binding enzyme BJD94_RS07690 PF00155 Aminotransferase class I and II BJD94_RS07700 PF13286 Phosphohydrolase-associated domain BJD94_RS07700 PF01966 HD domain BJD94_RS07705 PF03942 DTW domain BJD94_RS07720 PF13145 PPIC-type PPIASE domain BJD94_RS07725 PF00216 Bacterial DNA-binding protein BJD94_RS07730 PF00004 ATPase family associated with various cellular activities (AAA) BJD94_RS07730 PF02190 ATP-dependent protease La (LON) substrate-binding domain BJD94_RS07730 PF05362 Lon protease (S16) C-terminal proteolytic domain BJD94_RS07735 PF07724 AAA domain (Cdc48 subfamily) BJD94_RS07735 PF10431 C-terminal, D2-small domain, of ClpB protein BJD94_RS07735 PF06689 ClpX C4-type zinc finger BJD94_RS07740 PF00574 Clp protease BJD94_RS07745 PF05698 Bacterial trigger factor protein (TF) C-terminus BJD94_RS07745 PF05697 Bacterial trigger factor protein (TF) BJD94_RS07745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD94_RS07750 PF02743 Cache domain BJD94_RS07750 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS07755 PF00158 Sigma-54 interaction domain BJD94_RS07755 PF00072 Response regulator receiver domain BJD94_RS07755 PF02954 Bacterial regulatory protein, Fis family BJD94_RS07760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BJD94_RS07765 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BJD94_RS07770 PF03480 Bacterial extracellular solute-binding protein, family 7 BJD94_RS07780 PF03459 TOBE domain BJD94_RS07780 PF17912 MalK OB fold domain BJD94_RS07780 PF00005 ABC transporter BJD94_RS07785 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS07790 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS07795 PF01547 Bacterial extracellular solute-binding protein BJD94_RS07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS07800 PF00672 HAMP domain BJD94_RS07800 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS07805 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS07805 PF00072 Response regulator receiver domain BJD94_RS07810 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BJD94_RS07815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS07815 PF00672 HAMP domain BJD94_RS07815 PF02743 Cache domain BJD94_RS07830 PF04820 Tryptophan halogenase BJD94_RS07855 PF00550 Phosphopantetheine attachment site BJD94_RS07860 PF00550 Phosphopantetheine attachment site BJD94_RS07880 PF00535 Glycosyl transferase family 2 BJD94_RS07885 PF00221 Aromatic amino acid lyase BJD94_RS07910 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD94_RS07910 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD94_RS07925 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD94_RS07925 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD94_RS07935 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS07935 PF18719 ArlS sensor domain BJD94_RS07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS07940 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS07940 PF00072 Response regulator receiver domain BJD94_RS07950 PF07670 Nucleoside recognition BJD94_RS07950 PF07662 Na+ dependent nucleoside transporter C-terminus BJD94_RS07950 PF01773 Na+ dependent nucleoside transporter N-terminus BJD94_RS07955 PF03466 LysR substrate binding domain BJD94_RS07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS07960 PF13406 Transglycosylase SLT domain BJD94_RS07965 PF05166 YcgL domain BJD94_RS07970 PF03775 Septum formation inhibitor MinC, C-terminal domain BJD94_RS07970 PF05209 Septum formation inhibitor MinC, N-terminal domain BJD94_RS07975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BJD94_RS07980 PF03776 Septum formation topological specificity factor MinE BJD94_RS07985 PF01612 3'-5' exonuclease BJD94_RS07985 PF00570 HRDC domain BJD94_RS07990 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS07990 PF00501 AMP-binding enzyme BJD94_RS07995 PF00561 alpha/beta hydrolase fold BJD94_RS08010 PF00814 Glycoprotease family BJD94_RS08015 PF04851 Type III restriction enzyme, res subunit BJD94_RS08015 PF13307 Helicase C-terminal domain BJD94_RS08025 PF01842 ACT domain BJD94_RS08025 PF00551 Formyl transferase BJD94_RS08030 PF06185 YecM protein BJD94_RS08035 PF00750 tRNA synthetases class I (R) BJD94_RS08035 PF03485 Arginyl tRNA synthetase N terminal domain BJD94_RS08035 PF05746 DALR anticodon binding domain BJD94_RS08050 PF02421 Ferrous iron transport protein B BJD94_RS08050 PF07664 Ferrous iron transport protein B C terminus BJD94_RS08050 PF07670 Nucleoside recognition BJD94_RS08055 PF04023 FeoA domain BJD94_RS08065 PF01297 Zinc-uptake complex component A periplasmic BJD94_RS08070 PF00005 ABC transporter BJD94_RS08075 PF00950 ABC 3 transport family BJD94_RS08080 PF00549 CoA-ligase BJD94_RS08080 PF02629 CoA binding domain BJD94_RS08085 PF08442 ATP-grasp domain BJD94_RS08085 PF00549 CoA-ligase BJD94_RS08090 PF00364 Biotin-requiring enzyme BJD94_RS08090 PF02817 e3 binding domain BJD94_RS08090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD94_RS08095 PF16078 2-oxoglutarate dehydrogenase N-terminus BJD94_RS08095 PF16870 2-oxoglutarate dehydrogenase C-terminal BJD94_RS08095 PF00676 Dehydrogenase E1 component BJD94_RS08095 PF02779 Transketolase, pyrimidine binding domain BJD94_RS08100 PF13085 2Fe-2S iron-sulfur cluster binding domain BJD94_RS08105 PF00890 FAD binding domain BJD94_RS08105 PF02910 Fumarate reductase flavoprotein C-term BJD94_RS08110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BJD94_RS08115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BJD94_RS08120 PF00285 Citrate synthase, C-terminal domain BJD94_RS08125 PF01784 NIF3 (NGG1p interacting factor 3) BJD94_RS08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS08135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD94_RS08140 PF00375 Sodium:dicarboxylate symporter family BJD94_RS08145 PF01042 Endoribonuclease L-PSP BJD94_RS08150 PF08348 YheO-like PAS domain BJD94_RS08150 PF13309 HTH domain BJD94_RS08155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD94_RS08155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD94_RS08155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD94_RS08155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD94_RS08160 PF03925 SeqA protein C-terminal domain BJD94_RS08160 PF17206 SeqA protein N-terminal domain BJD94_RS08165 PF12697 Alpha/beta hydrolase family BJD94_RS08175 PF00258 Flavodoxin BJD94_RS08185 PF01475 Ferric uptake regulator family BJD94_RS08190 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD94_RS08190 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BJD94_RS08195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BJD94_RS08195 PF00367 phosphotransferase system, EIIB BJD94_RS08195 PF02378 Phosphotransferase system, EIIC BJD94_RS08200 PF01979 Amidohydrolase family BJD94_RS08205 PF01047 MarR family BJD94_RS08205 PF00480 ROK family BJD94_RS08210 PF00999 Sodium/hydrogen exchanger family BJD94_RS08210 PF02254 TrkA-N domain BJD94_RS08215 PF00733 Asparagine synthase BJD94_RS08215 PF13537 Glutamine amidotransferase domain BJD94_RS08225 PF00854 POT family BJD94_RS08235 PF00762 Ferrochelatase BJD94_RS08240 PF05191 Adenylate kinase, active site lid BJD94_RS08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS08245 PF00183 Hsp90 protein BJD94_RS08250 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS08255 PF17323 Trans-membrane regulatory protein ToxS BJD94_RS08270 PF12850 Calcineurin-like phosphoesterase superfamily domain BJD94_RS08285 PF07556 Protein of unknown function (DUF1538) BJD94_RS08290 PF07556 Protein of unknown function (DUF1538) BJD94_RS08295 PF08338 Domain of unknown function (DUF1731) BJD94_RS08295 PF01370 NAD dependent epimerase/dehydratase family BJD94_RS08300 PF00106 short chain dehydrogenase BJD94_RS08310 PF00085 Thioredoxin BJD94_RS08315 PF01145 SPFH domain / Band 7 family BJD94_RS08315 PF16200 C-terminal region of band_7 BJD94_RS08335 PF01653 NAD-dependent DNA ligase adenylation domain BJD94_RS08335 PF03120 NAD-dependent DNA ligase OB-fold domain BJD94_RS08335 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BJD94_RS08335 PF12826 Helix-hairpin-helix motif BJD94_RS08335 PF00533 BRCA1 C Terminus (BRCT) domain BJD94_RS08340 PF04354 ZipA, C-terminal FtsZ-binding domain BJD94_RS08350 PF00291 Pyridoxal-phosphate dependent enzyme BJD94_RS08355 PF00381 PTS HPr component phosphorylation site BJD94_RS08360 PF05524 PEP-utilising enzyme, N-terminal BJD94_RS08360 PF00391 PEP-utilising enzyme, mobile domain BJD94_RS08360 PF02896 PEP-utilising enzyme, TIM barrel domain BJD94_RS08365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BJD94_RS08370 PF00669 Bacterial flagellin N-terminal helical region BJD94_RS08370 PF00700 Bacterial flagellin C-terminal helical region BJD94_RS08370 PF07196 Flagellin hook IN motif BJD94_RS08375 PF00669 Bacterial flagellin N-terminal helical region BJD94_RS08375 PF00700 Bacterial flagellin C-terminal helical region BJD94_RS08375 PF07196 Flagellin hook IN motif BJD94_RS08380 PF07196 Flagellin hook IN motif BJD94_RS08380 PF00700 Bacterial flagellin C-terminal helical region BJD94_RS08380 PF00669 Bacterial flagellin N-terminal helical region BJD94_RS08385 PF00669 Bacterial flagellin N-terminal helical region BJD94_RS08390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD94_RS08390 PF07196 Flagellin hook IN motif BJD94_RS08395 PF10135 Rod binding protein BJD94_RS08395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BJD94_RS08400 PF02119 Flagellar P-ring protein BJD94_RS08405 PF02107 Flagellar L-ring protein BJD94_RS08410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD94_RS08410 PF00460 Flagella basal body rod protein BJD94_RS08415 PF00460 Flagella basal body rod protein BJD94_RS08415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD94_RS08420 PF00460 Flagella basal body rod protein BJD94_RS08420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD94_RS08420 PF07559 Flagellar basal body protein FlaE BJD94_RS08425 PF13861 FlgD Tudor-like domain BJD94_RS08425 PF03963 Flagellar hook capping protein - N-terminal region BJD94_RS08425 PF13860 FlgD Ig-like domain BJD94_RS08430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD94_RS08430 PF00460 Flagella basal body rod protein BJD94_RS08435 PF00460 Flagella basal body rod protein BJD94_RS08440 PF01739 CheR methyltransferase, SAM binding domain BJD94_RS08440 PF03705 CheR methyltransferase, all-alpha domain BJD94_RS08445 PF00072 Response regulator receiver domain BJD94_RS08445 PF01584 CheW-like domain BJD94_RS08490 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD94_RS08495 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BJD94_RS08500 PF13609 Gram-negative porin BJD94_RS08505 PF00403 Heavy-metal-associated domain BJD94_RS08515 PF02838 Glycosyl hydrolase family 20, domain 2 BJD94_RS08515 PF03173 Putative carbohydrate binding domain BJD94_RS08515 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BJD94_RS08515 PF00728 Glycosyl hydrolase family 20, catalytic domain BJD94_RS08520 PF01963 TraB family BJD94_RS08540 PF01713 Smr domain BJD94_RS08545 PF01479 S4 domain BJD94_RS08545 PF00849 RNA pseudouridylate synthase BJD94_RS08555 PF04073 Aminoacyl-tRNA editing domain BJD94_RS08560 PF02872 5'-nucleotidase, C-terminal domain BJD94_RS08560 PF00149 Calcineurin-like phosphoesterase BJD94_RS08565 PF00793 DAHP synthetase I family BJD94_RS08570 PF13369 Transglutaminase-like superfamily BJD94_RS08575 PF04247 Invasion gene expression up-regulator, SirB BJD94_RS08580 PF13847 Methyltransferase domain BJD94_RS08580 PF17827 PrmC N-terminal domain BJD94_RS08585 PF03462 PCRF domain BJD94_RS08585 PF00472 RF-1 domain BJD94_RS08590 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BJD94_RS08590 PF01488 Shikimate / quinate 5-dehydrogenase BJD94_RS08590 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BJD94_RS08595 PF03550 Outer membrane lipoprotein LolB BJD94_RS08600 PF08544 GHMP kinases C terminal BJD94_RS08600 PF00288 GHMP kinases N terminal domain BJD94_RS08605 PF14572 Phosphoribosyl synthetase-associated domain BJD94_RS08605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BJD94_RS08610 PF01195 Peptidyl-tRNA hydrolase BJD94_RS08615 PF01926 50S ribosome-binding GTPase BJD94_RS08615 PF06071 Protein of unknown function (DUF933) BJD94_RS08700 PF01494 FAD binding domain BJD94_RS08705 PF00919 Uncharacterized protein family UPF0004 BJD94_RS08705 PF04055 Radical SAM superfamily BJD94_RS08705 PF01938 TRAM domain BJD94_RS08710 PF02562 PhoH-like protein BJD94_RS08715 PF02130 Uncharacterized protein family UPF0054 BJD94_RS08720 PF03471 Transporter associated domain BJD94_RS08720 PF00571 CBS domain BJD94_RS08725 PF00795 Carbon-nitrogen hydrolase BJD94_RS08730 PF07295 Zinc-ribbon containing domain BJD94_RS08735 PF00133 tRNA synthetases class I (I, L, M and V) BJD94_RS08735 PF08264 Anticodon-binding domain of tRNA BJD94_RS08735 PF13603 Leucyl-tRNA synthetase, Domain 2 BJD94_RS08740 PF04390 Lipopolysaccharide-assembly BJD94_RS08745 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BJD94_RS08745 PF06144 DNA polymerase III, delta subunit BJD94_RS08755 PF02590 Predicted SPOUT methyltransferase BJD94_RS08760 PF00905 Penicillin binding protein transpeptidase domain BJD94_RS08760 PF03717 Penicillin-binding Protein dimerisation domain BJD94_RS08765 PF01098 Cell cycle protein BJD94_RS08770 PF03330 Lytic transglycolase BJD94_RS08770 PF05036 Sporulation related domain BJD94_RS08775 PF00768 D-alanyl-D-alanine carboxypeptidase BJD94_RS08775 PF07943 Penicillin-binding protein 5, C-terminal domain BJD94_RS08780 PF04359 Protein of unknown function (DUF493) BJD94_RS08785 PF03099 Biotin/lipoate A/B protein ligase family BJD94_RS08790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BJD94_RS08790 PF04055 Radical SAM superfamily BJD94_RS08800 PF00464 Serine hydroxymethyltransferase BJD94_RS08830 PF00128 Alpha amylase, catalytic domain BJD94_RS08830 PF16657 Maltogenic Amylase, C-terminal domain BJD94_RS08835 PF00367 phosphotransferase system, EIIB BJD94_RS08835 PF02378 Phosphotransferase system, EIIC BJD94_RS08840 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS08850 PF09383 NIL domain BJD94_RS08850 PF00005 ABC transporter BJD94_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS08860 PF03180 NLPA lipoprotein BJD94_RS08865 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) BJD94_RS08870 PF07348 Syd protein (SUKH-2) BJD94_RS08875 PF14489 QueF-like protein BJD94_RS08875 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BJD94_RS08885 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS08890 PF03641 Possible lysine decarboxylase BJD94_RS08890 PF11892 Domain of unknown function (DUF3412) BJD94_RS08890 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BJD94_RS08895 PF01367 5'-3' exonuclease, C-terminal SAM fold BJD94_RS08895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BJD94_RS08900 PF01223 DNA/RNA non-specific endonuclease BJD94_RS08905 PF18125 RlmM ferredoxin-like domain BJD94_RS08905 PF01728 FtsJ-like methyltransferase BJD94_RS08910 PF04241 Protein of unknown function (DUF423) BJD94_RS08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS08920 PF03466 LysR substrate binding domain BJD94_RS08925 PF02568 Thiamine biosynthesis protein (ThiI) BJD94_RS08925 PF02926 THUMP domain BJD94_RS08930 PF00691 OmpA family BJD94_RS08930 PF13677 Membrane MotB of proton-channel complex MotA/MotB BJD94_RS08935 PF01618 MotA/TolQ/ExbB proton channel family BJD94_RS08940 PF02609 Exonuclease VII small subunit BJD94_RS08945 PF00348 Polyprenyl synthetase BJD94_RS08950 PF02780 Transketolase, C-terminal domain BJD94_RS08950 PF02779 Transketolase, pyrimidine binding domain BJD94_RS08950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BJD94_RS08955 PF04608 Phosphatidylglycerophosphatase A BJD94_RS08960 PF00586 AIR synthase related protein, N-terminal domain BJD94_RS08960 PF02769 AIR synthase related protein, C-terminal domain BJD94_RS08965 PF01029 NusB family BJD94_RS08970 PF00885 6,7-dimethyl-8-ribityllumazine synthase BJD94_RS08975 PF00925 GTP cyclohydrolase II BJD94_RS08975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BJD94_RS08980 PF00677 Lumazine binding domain BJD94_RS08985 PF01872 RibD C-terminal domain BJD94_RS08985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BJD94_RS08990 PF03477 ATP cone domain BJD94_RS08995 PF00171 Aldehyde dehydrogenase family BJD94_RS09000 PF01472 PUA domain BJD94_RS09000 PF00696 Amino acid kinase family BJD94_RS09005 PF07417 Sigma factor-binding transcriptional regulator Crl BJD94_RS09010 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BJD94_RS09015 PF00156 Phosphoribosyl transferase domain BJD94_RS09020 PF00860 Permease family BJD94_RS09025 PF07687 Peptidase dimerisation domain BJD94_RS09025 PF01546 Peptidase family M20/M25/M40 BJD94_RS09050 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BJD94_RS09050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BJD94_RS09050 PF02769 AIR synthase related protein, C-terminal domain BJD94_RS09055 PF01464 Transglycosylase SLT domain BJD94_RS09055 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS09065 PF14437 MafB19-like deaminase BJD94_RS09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS09070 PF03466 LysR substrate binding domain BJD94_RS09075 PF08240 Alcohol dehydrogenase GroES-like domain BJD94_RS09075 PF00107 Zinc-binding dehydrogenase BJD94_RS09080 PF00756 Putative esterase BJD94_RS09085 PF03806 AbgT putative transporter family BJD94_RS09110 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS09110 PF00114 Pilin (bacterial filament) BJD94_RS09115 PF00684 DnaJ central domain BJD94_RS09115 PF00226 DnaJ domain BJD94_RS09115 PF01556 DnaJ C terminal domain BJD94_RS09120 PF00012 Hsp70 protein BJD94_RS09145 PF00375 Sodium:dicarboxylate symporter family BJD94_RS09150 PF01025 GrpE BJD94_RS09155 PF01513 ATP-NAD kinase BJD94_RS09160 PF02463 RecF/RecN/SMC N terminal domain BJD94_RS09165 PF04355 SmpA / OmlA family BJD94_RS09170 PF03658 RnfH family Ubiquitin BJD94_RS09175 PF03364 Polyketide cyclase / dehydrase and lipid transport BJD94_RS09180 PF01668 SmpB protein BJD94_RS09220 PF03481 Putative GTP-binding controlling metal-binding BJD94_RS09220 PF01300 Telomere recombination BJD94_RS09230 PF02028 BCCT, betaine/carnitine/choline family transporter BJD94_RS09235 PF07885 Ion channel BJD94_RS09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS09240 PF03466 LysR substrate binding domain BJD94_RS09245 PF01266 FAD dependent oxidoreductase BJD94_RS09250 PF01235 Sodium:alanine symporter family BJD94_RS09255 PF01184 GPR1/FUN34/yaaH family BJD94_RS09260 PF00704 Glycosyl hydrolases family 18 BJD94_RS09260 PF06483 Chitinase C BJD94_RS09265 PF00958 GMP synthase C terminal domain BJD94_RS09265 PF02540 NAD synthase BJD94_RS09265 PF00117 Glutamine amidotransferase class-I BJD94_RS09270 PF00571 CBS domain BJD94_RS09270 PF00478 IMP dehydrogenase / GMP reductase domain BJD94_RS09275 PF13742 OB-fold nucleic acid binding domain BJD94_RS09275 PF02601 Exonuclease VII, large subunit BJD94_RS09285 PF13185 GAF domain BJD94_RS09285 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS09295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BJD94_RS09295 PF01926 50S ribosome-binding GTPase BJD94_RS09300 PF13360 PQQ-like domain BJD94_RS09305 PF09976 Tetratricopeptide repeat-like domain BJD94_RS09310 PF13393 Histidyl-tRNA synthetase BJD94_RS09310 PF03129 Anticodon binding domain BJD94_RS09315 PF04551 GcpE protein BJD94_RS09320 PF13464 Domain of unknown function (DUF4115) BJD94_RS09325 PF04055 Radical SAM superfamily BJD94_RS09330 PF00334 Nucleoside diphosphate kinase BJD94_RS09335 PF12404 Peptidase BJD94_RS09335 PF00883 Cytosol aminopeptidase family, catalytic domain BJD94_RS09340 PF04384 Iron-sulphur cluster assembly BJD94_RS09345 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD94_RS09350 PF00012 Hsp70 protein BJD94_RS09355 PF07743 HSCB C-terminal oligomerisation domain BJD94_RS09355 PF00226 DnaJ domain BJD94_RS09360 PF01521 Iron-sulphur cluster biosynthesis BJD94_RS09365 PF01592 NifU-like N terminal domain BJD94_RS09370 PF00266 Aminotransferase class-V BJD94_RS09375 PF02082 Transcriptional regulator BJD94_RS09380 PF00588 SpoU rRNA Methylase family BJD94_RS09385 PF00459 Inositol monophosphatase family BJD94_RS09400 PF02355 Protein export membrane protein BJD94_RS09400 PF07549 SecD/SecF GG Motif BJD94_RS09405 PF13721 SecD export protein N-terminal TM region BJD94_RS09405 PF07549 SecD/SecF GG Motif BJD94_RS09405 PF02355 Protein export membrane protein BJD94_RS09410 PF02699 Preprotein translocase subunit BJD94_RS09415 PF01702 Queuine tRNA-ribosyltransferase BJD94_RS09420 PF02547 Queuosine biosynthesis protein BJD94_RS09430 PF00571 CBS domain BJD94_RS09435 PF00463 Isocitrate lyase family BJD94_RS09440 PF01274 Malate synthase BJD94_RS09445 PF03466 LysR substrate binding domain BJD94_RS09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS09450 PF10417 C-terminal domain of 1-Cys peroxiredoxin BJD94_RS09450 PF00578 AhpC/TSA family BJD94_RS09455 PF03932 CutC family BJD94_RS09460 PF03976 Polyphosphate kinase 2 (PPK2) BJD94_RS09465 PF01895 PhoU domain BJD94_RS09470 PF00005 ABC transporter BJD94_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS09485 PF02503 Polyphosphate kinase middle domain BJD94_RS09485 PF17941 Polyphosphate kinase C-terminal domain 1 BJD94_RS09485 PF13090 Polyphosphate kinase C-terminal domain 2 BJD94_RS09485 PF13089 Polyphosphate kinase N-terminal domain BJD94_RS09490 PF02541 Ppx/GppA phosphatase family BJD94_RS09495 PF12849 PBP superfamily domain BJD94_RS09500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS09500 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS09500 PF00989 PAS fold BJD94_RS09500 PF11808 Phosphate regulon sensor protein PhoR BJD94_RS09505 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS09505 PF00072 Response regulator receiver domain BJD94_RS09510 PF04381 Putative exonuclease, RdgC BJD94_RS09515 PF16325 Peptidase family U32 C-terminal domain BJD94_RS09515 PF01136 Peptidase family U32 BJD94_RS09520 PF00037 4Fe-4S binding domain BJD94_RS09525 PF03411 Penicillin-insensitive murein endopeptidase BJD94_RS09560 PF10431 C-terminal, D2-small domain, of ClpB protein BJD94_RS09560 PF00004 ATPase family associated with various cellular activities (AAA) BJD94_RS09560 PF07724 AAA domain (Cdc48 subfamily) BJD94_RS09560 PF17871 AAA lid domain BJD94_RS09560 PF02861 Clp amino terminal domain, pathogenicity island component BJD94_RS09565 PF02578 Multi-copper polyphenol oxidoreductase laccase BJD94_RS09570 PF00849 RNA pseudouridylate synthase BJD94_RS09570 PF01479 S4 domain BJD94_RS09575 PF13525 Outer membrane lipoprotein BJD94_RS09585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BJD94_RS09590 PF01817 Chorismate mutase type II BJD94_RS09590 PF00800 Prephenate dehydratase BJD94_RS09595 PF01931 Protein of unknown function DUF84 BJD94_RS09600 PF01371 Trp repressor protein BJD94_RS09605 PF01464 Transglycosylase SLT domain BJD94_RS09605 PF14718 Soluble lytic murein transglycosylase L domain BJD94_RS09610 PF00005 ABC transporter BJD94_RS09610 PF12848 ABC transporter BJD94_RS09615 PF07238 PilZ domain BJD94_RS09620 PF04225 Opacity-associated protein A LysM-like domain BJD94_RS09620 PF01551 Peptidase family M23 BJD94_RS09625 PF02153 Prephenate dehydrogenase BJD94_RS09625 PF01817 Chorismate mutase type II BJD94_RS09630 PF00793 DAHP synthetase I family BJD94_RS09635 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD94_RS09640 PF03702 Anhydro-N-acetylmuramic acid kinase BJD94_RS09660 PF02554 Carbon starvation protein CstA BJD94_RS09665 PF06580 Histidine kinase BJD94_RS09665 PF07694 5TMR of 5TMR-LYT BJD94_RS09670 PF04397 LytTr DNA-binding domain BJD94_RS09670 PF00072 Response regulator receiver domain BJD94_RS09675 PF02401 LytB protein BJD94_RS09680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD94_RS09690 PF01252 Signal peptidase (SPase) II BJD94_RS09695 PF08264 Anticodon-binding domain of tRNA BJD94_RS09695 PF06827 Zinc finger found in FPG and IleRS BJD94_RS09695 PF00133 tRNA synthetases class I (I, L, M and V) BJD94_RS09700 PF01687 Riboflavin kinase BJD94_RS09700 PF06574 FAD synthetase BJD94_RS09705 PF03023 Lipid II flippase MurJ BJD94_RS09710 PF01649 Ribosomal protein S20 BJD94_RS09715 PF01022 Bacterial regulatory protein, arsR family BJD94_RS09720 PF03466 LysR substrate binding domain BJD94_RS09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS09725 PF02690 Na+/Pi-cotransporter BJD94_RS09735 PF00303 Thymidylate synthase BJD94_RS09740 PF01790 Prolipoprotein diacylglyceryl transferase BJD94_RS09745 PF01925 Sulfite exporter TauE/SafE BJD94_RS09750 PF05524 PEP-utilising enzyme, N-terminal BJD94_RS09750 PF02896 PEP-utilising enzyme, TIM barrel domain BJD94_RS09750 PF00391 PEP-utilising enzyme, mobile domain BJD94_RS09750 PF01590 GAF domain BJD94_RS09755 PF00293 NUDIX domain BJD94_RS09760 PF02976 DNA mismatch repair enzyme MutH BJD94_RS09770 PF00248 Aldo/keto reductase family BJD94_RS09780 PF02954 Bacterial regulatory protein, Fis family BJD94_RS09780 PF06505 Activator of aromatic catabolism BJD94_RS09780 PF00158 Sigma-54 interaction domain BJD94_RS09780 PF02830 V4R domain BJD94_RS09785 PF01336 OB-fold nucleic acid binding domain BJD94_RS09785 PF00152 tRNA synthetases class II (D, K and N) BJD94_RS09795 PF17768 RecJ OB domain BJD94_RS09795 PF02272 DHHA1 domain BJD94_RS09795 PF01368 DHH family BJD94_RS09800 PF13098 Thioredoxin-like domain BJD94_RS09800 PF10411 Disulfide bond isomerase protein N-terminus BJD94_RS09805 PF00589 Phage integrase family BJD94_RS09805 PF02899 Phage integrase, N-terminal SAM-like domain BJD94_RS09810 PF00258 Flavodoxin BJD94_RS09815 PF05525 Branched-chain amino acid transport protein BJD94_RS09820 PF05175 Methyltransferase small domain BJD94_RS09825 PF00271 Helicase conserved C-terminal domain BJD94_RS09825 PF00270 DEAD/DEAH box helicase BJD94_RS09830 PF03883 Peroxide stress protein YaaA BJD94_RS09835 PF01235 Sodium:alanine symporter family BJD94_RS09850 PF03167 Uracil DNA glycosylase superfamily BJD94_RS09855 PF01261 Xylose isomerase-like TIM barrel BJD94_RS09860 PF01228 Glycine radical BJD94_RS09865 PF00291 Pyridoxal-phosphate dependent enzyme BJD94_RS09865 PF14821 Threonine synthase N terminus BJD94_RS09870 PF08544 GHMP kinases C terminal BJD94_RS09870 PF00288 GHMP kinases N terminal domain BJD94_RS09875 PF13840 ACT domain BJD94_RS09875 PF00742 Homoserine dehydrogenase BJD94_RS09875 PF01842 ACT domain BJD94_RS09875 PF03447 Homoserine dehydrogenase, NAD binding domain BJD94_RS09875 PF00696 Amino acid kinase family BJD94_RS09885 PF03737 Aldolase/RraA BJD94_RS09900 PF00072 Response regulator receiver domain BJD94_RS09900 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS09910 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS09910 PF01627 Hpt domain BJD94_RS09910 PF18415 Histidine kinase receptor ArcB trans-membrane domain BJD94_RS09910 PF00989 PAS fold BJD94_RS09910 PF00072 Response regulator receiver domain BJD94_RS09915 PF00563 EAL domain BJD94_RS09915 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS09915 PF01590 GAF domain BJD94_RS09915 PF00360 Phytochrome region BJD94_RS09920 PF16199 Radical_SAM C-terminal domain BJD94_RS09920 PF04055 Radical SAM superfamily BJD94_RS09925 PF01493 GXGXG motif BJD94_RS09925 PF01645 Conserved region in glutamate synthase BJD94_RS09925 PF04898 Glutamate synthase central domain BJD94_RS09925 PF00310 Glutamine amidotransferases class-II BJD94_RS09930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BJD94_RS09930 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS09935 PF04898 Glutamate synthase central domain BJD94_RS09935 PF00310 Glutamine amidotransferases class-II BJD94_RS09935 PF01493 GXGXG motif BJD94_RS09935 PF01645 Conserved region in glutamate synthase BJD94_RS09940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BJD94_RS09940 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS09950 PF01048 Phosphorylase superfamily BJD94_RS09955 PF03186 CobD/Cbib protein BJD94_RS09955 PF17113 Regulatory signalling modulator protein AmpE BJD94_RS09960 PF01497 Periplasmic binding protein BJD94_RS09965 PF03458 UPF0126 domain BJD94_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS09970 PF03466 LysR substrate binding domain BJD94_RS09975 PF01925 Sulfite exporter TauE/SafE BJD94_RS09985 PF02142 MGS-like domain BJD94_RS09985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BJD94_RS09985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD94_RS09990 PF00117 Glutamine amidotransferase class-I BJD94_RS09990 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BJD94_RS09995 PF05173 Dihydrodipicolinate reductase, C-terminus BJD94_RS09995 PF01113 Dihydrodipicolinate reductase, N-terminus BJD94_RS10000 PF00293 NUDIX domain BJD94_RS10005 PF02810 SEC-C motif BJD94_RS10005 PF07517 SecA DEAD-like domain BJD94_RS10005 PF01043 SecA preprotein cross-linking domain BJD94_RS10005 PF07516 SecA Wing and Scaffold domain BJD94_RS10015 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BJD94_RS10020 PF12327 FtsZ family, C-terminal domain BJD94_RS10020 PF00091 Tubulin/FtsZ family, GTPase domain BJD94_RS10025 PF02491 SHS2 domain inserted in FTSA BJD94_RS10030 PF08478 POTRA domain, FtsQ-type BJD94_RS10030 PF03799 Cell division protein FtsQ BJD94_RS10035 PF01225 Mur ligase family, catalytic domain BJD94_RS10035 PF02875 Mur ligase family, glutamate ligase domain BJD94_RS10035 PF08245 Mur ligase middle domain BJD94_RS10040 PF04101 Glycosyltransferase family 28 C-terminal domain BJD94_RS10040 PF03033 Glycosyltransferase family 28 N-terminal domain BJD94_RS10045 PF01098 Cell cycle protein BJD94_RS10050 PF08245 Mur ligase middle domain BJD94_RS10050 PF02875 Mur ligase family, glutamate ligase domain BJD94_RS10055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BJD94_RS10055 PF00953 Glycosyl transferase family 4 BJD94_RS10060 PF08245 Mur ligase middle domain BJD94_RS10060 PF01225 Mur ligase family, catalytic domain BJD94_RS10060 PF02875 Mur ligase family, glutamate ligase domain BJD94_RS10065 PF08245 Mur ligase middle domain BJD94_RS10065 PF01225 Mur ligase family, catalytic domain BJD94_RS10065 PF02875 Mur ligase family, glutamate ligase domain BJD94_RS10070 PF00905 Penicillin binding protein transpeptidase domain BJD94_RS10070 PF03717 Penicillin-binding Protein dimerisation domain BJD94_RS10075 PF04999 Cell division protein FtsL BJD94_RS10080 PF01795 MraW methylase family BJD94_RS10090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD94_RS10095 PF04348 LppC putative lipoprotein BJD94_RS10100 PF02021 Uncharacterised protein family UPF0102 BJD94_RS10105 PF13580 SIS domain BJD94_RS10110 PF04972 BON domain BJD94_RS10115 PF04386 Stringent starvation protein B BJD94_RS10120 PF02798 Glutathione S-transferase, N-terminal domain BJD94_RS10120 PF00043 Glutathione S-transferase, C-terminal domain BJD94_RS10125 PF02167 Cytochrome C1 family BJD94_RS10130 PF00032 Cytochrome b(C-terminal)/b6/petD BJD94_RS10130 PF00033 Cytochrome b/b6/petB BJD94_RS10135 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BJD94_RS10135 PF00355 Rieske [2Fe-2S] domain BJD94_RS10140 PF00380 Ribosomal protein S9/S16 BJD94_RS10145 PF00572 Ribosomal protein L13 BJD94_RS10155 PF03969 AFG1-like ATPase BJD94_RS10160 PF06295 Protein of unknown function (DUF1043) BJD94_RS10165 PF00595 PDZ domain BJD94_RS10170 PF13180 PDZ domain BJD94_RS10175 PF03989 DNA gyrase C-terminal domain, beta-propeller BJD94_RS10175 PF00521 DNA gyrase/topoisomerase IV, subunit A BJD94_RS10180 PF00986 DNA gyrase B subunit, carboxyl terminus BJD94_RS10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS10180 PF01751 Toprim domain BJD94_RS10180 PF00204 DNA gyrase B BJD94_RS10185 PF05728 Uncharacterised protein family (UPF0227) BJD94_RS10190 PF00149 Calcineurin-like phosphoesterase BJD94_RS10195 PF06853 Protein of unknown function (DUF1249) BJD94_RS10200 PF00293 NUDIX domain BJD94_RS10205 PF02321 Outer membrane efflux protein BJD94_RS10210 PF01467 Cytidylyltransferase-like BJD94_RS10210 PF00294 pfkB family carbohydrate kinase BJD94_RS10215 PF03710 Glutamate-ammonia ligase adenylyltransferase BJD94_RS10215 PF08335 GlnD PII-uridylyltransferase BJD94_RS10220 PF00672 HAMP domain BJD94_RS10220 PF12729 Four helix bundle sensory module for signal transduction BJD94_RS10220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS10225 PF07885 Ion channel BJD94_RS10230 PF01928 CYTH domain BJD94_RS10235 PF01865 Protein of unknown function DUF47 BJD94_RS10240 PF01384 Phosphate transporter family BJD94_RS10245 PF08239 Bacterial SH3 domain BJD94_RS10250 PF01471 Putative peptidoglycan binding domain BJD94_RS10250 PF13401 AAA domain BJD94_RS10255 PF12627 Probable RNA and SrmB- binding site of polymerase A BJD94_RS10255 PF01743 Poly A polymerase head domain BJD94_RS10255 PF01966 HD domain BJD94_RS10260 PF02673 Bacitracin resistance protein BacA BJD94_RS10265 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BJD94_RS10270 PF02152 Dihydroneopterin aldolase BJD94_RS10275 PF02660 Glycerol-3-phosphate acyltransferase BJD94_RS10280 PF12697 Alpha/beta hydrolase family BJD94_RS10285 PF00814 Glycoprotease family BJD94_RS10290 PF01165 Ribosomal protein S21 BJD94_RS10295 PF09424 Yqey-like protein BJD94_RS10300 PF10410 DnaB-helicase binding domain of primase BJD94_RS10300 PF01807 CHC2 zinc finger BJD94_RS10300 PF08278 DNA primase DnaG DnaB-binding BJD94_RS10300 PF08275 DNA primase catalytic core, N-terminal domain BJD94_RS10305 PF04542 Sigma-70 region 2 BJD94_RS10305 PF00140 Sigma-70 factor, region 1.2 BJD94_RS10305 PF04546 Sigma-70, non-essential region BJD94_RS10305 PF04539 Sigma-70 region 3 BJD94_RS10305 PF04545 Sigma-70, region 4 BJD94_RS10305 PF03979 Sigma-70 factor, region 1.1 BJD94_RS10315 PF00589 Phage integrase family BJD94_RS10315 PF13356 Arm DNA-binding domain BJD94_RS10370 PF06803 Protein of unknown function (DUF1232) BJD94_RS10385 PF04002 RadC-like JAB domain BJD94_RS10390 PF02371 Transposase IS116/IS110/IS902 family BJD94_RS10390 PF01548 Transposase BJD94_RS10415 PF10544 T5orf172 domain BJD94_RS10440 PF13657 HipA N-terminal domain BJD94_RS10440 PF07804 HipA-like C-terminal domain BJD94_RS10455 PF03480 Bacterial extracellular solute-binding protein, family 7 BJD94_RS10460 PF01380 SIS domain BJD94_RS10465 PF00455 DeoR C terminal sensor domain BJD94_RS10465 PF08220 DeoR-like helix-turn-helix domain BJD94_RS10470 PF00224 Pyruvate kinase, barrel domain BJD94_RS10470 PF02887 Pyruvate kinase, alpha/beta domain BJD94_RS10480 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS10480 PF07694 5TMR of 5TMR-LYT BJD94_RS10485 PF10369 Small subunit of acetolactate synthase BJD94_RS10490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJD94_RS10490 PF00205 Thiamine pyrophosphate enzyme, central domain BJD94_RS10490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJD94_RS10495 PF00501 AMP-binding enzyme BJD94_RS10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS10500 PF03466 LysR substrate binding domain BJD94_RS10510 PF01569 PAP2 superfamily BJD94_RS10520 PF00682 HMGL-like BJD94_RS10520 PF08502 LeuA allosteric (dimerisation) domain BJD94_RS10525 PF00180 Isocitrate/isopropylmalate dehydrogenase BJD94_RS10530 PF00330 Aconitase family (aconitate hydratase) BJD94_RS10535 PF00694 Aconitase C-terminal domain BJD94_RS10545 PF00226 DnaJ domain BJD94_RS10545 PF05099 Tellurite resistance protein TerB BJD94_RS10550 PF04453 LPS transport system D BJD94_RS10550 PF03968 OstA-like protein BJD94_RS10555 PF09312 SurA N-terminal domain BJD94_RS10555 PF00639 PPIC-type PPIASE domain BJD94_RS10560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BJD94_RS10565 PF00398 Ribosomal RNA adenine dimethylase BJD94_RS10570 PF04379 ApaG domain BJD94_RS10575 PF00149 Calcineurin-like phosphoesterase BJD94_RS10580 PF00186 Dihydrofolate reductase BJD94_RS10585 PF12821 Threonine/Serine exporter, ThrE BJD94_RS10590 PF06738 Putative threonine/serine exporter BJD94_RS10595 PF01018 GTP1/OBG BJD94_RS10595 PF01926 50S ribosome-binding GTPase BJD94_RS10600 PF01016 Ribosomal L27 protein BJD94_RS10605 PF00829 Ribosomal prokaryotic L21 protein BJD94_RS10610 PF00348 Polyprenyl synthetase BJD94_RS10615 PF00056 lactate/malate dehydrogenase, NAD binding domain BJD94_RS10615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BJD94_RS10620 PF02863 Arginine repressor, C-terminal domain BJD94_RS10620 PF01316 Arginine repressor, DNA binding domain BJD94_RS10625 PF16868 NMT1-like family BJD94_RS10635 PF00582 Universal stress protein family BJD94_RS10640 PF01553 Acyltransferase BJD94_RS10645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJD94_RS10650 PF01722 BolA-like protein BJD94_RS10660 PF05494 MlaC protein BJD94_RS10665 PF02470 MlaD protein BJD94_RS10670 PF02405 Permease MlaE BJD94_RS10675 PF00005 ABC transporter BJD94_RS10680 PF01699 Sodium/calcium exchanger protein BJD94_RS10685 PF01380 SIS domain BJD94_RS10685 PF00571 CBS domain BJD94_RS10700 PF03968 OstA-like protein BJD94_RS10705 PF00005 ABC transporter BJD94_RS10705 PF12399 Branched-chain amino acid ATP-binding cassette transporter BJD94_RS10710 PF04552 Sigma-54, DNA binding domain BJD94_RS10710 PF04963 Sigma-54 factor, core binding domain BJD94_RS10710 PF00309 Sigma-54 factor, Activator interacting domain (AID) BJD94_RS10715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BJD94_RS10720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD94_RS10725 PF03668 P-loop ATPase protein family BJD94_RS10730 PF00381 PTS HPr component phosphorylation site BJD94_RS10735 PF00571 CBS domain BJD94_RS10735 PF03448 MgtE intracellular N domain BJD94_RS10735 PF01769 Divalent cation transporter BJD94_RS10740 PF01523 Putative modulator of DNA gyrase BJD94_RS10745 PF04751 Protein of unknown function (DUF615) BJD94_RS10750 PF00005 ABC transporter BJD94_RS10755 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS10765 PF02441 Flavoprotein BJD94_RS10770 PF08245 Mur ligase middle domain BJD94_RS10770 PF01225 Mur ligase family, catalytic domain BJD94_RS10770 PF02875 Mur ligase family, glutamate ligase domain BJD94_RS10775 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BJD94_RS10780 PF00719 Inorganic pyrophosphatase BJD94_RS10790 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BJD94_RS10795 PF04357 TamB, inner membrane protein subunit of TAM complex BJD94_RS10800 PF01103 Surface antigen BJD94_RS10800 PF17243 POTRA domain TamA domain 1 BJD94_RS10800 PF07244 Surface antigen variable number repeat BJD94_RS10805 PF01625 Peptide methionine sulfoxide reductase BJD94_RS10815 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BJD94_RS10830 PF12704 MacB-like periplasmic core domain BJD94_RS10830 PF02687 FtsX-like permease family BJD94_RS10830 PF00005 ABC transporter BJD94_RS10855 PF03600 Citrate transporter BJD94_RS10855 PF02080 TrkA-C domain BJD94_RS10860 PF00009 Elongation factor Tu GTP binding domain BJD94_RS10865 PF01507 Phosphoadenosine phosphosulfate reductase family BJD94_RS10870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD94_RS10870 PF10414 Sirohaem synthase dimerisation region BJD94_RS10870 PF14824 Sirohaem biosynthesis protein central BJD94_RS10875 PF02872 5'-nucleotidase, C-terminal domain BJD94_RS10875 PF00149 Calcineurin-like phosphoesterase BJD94_RS10885 PF13673 Acetyltransferase (GNAT) domain BJD94_RS10895 PF04225 Opacity-associated protein A LysM-like domain BJD94_RS10895 PF08525 Opacity-associated protein A N-terminal motif BJD94_RS10900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJD94_RS10900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD94_RS10910 PF01196 Ribosomal protein L17 BJD94_RS10915 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BJD94_RS10915 PF01000 RNA polymerase Rpb3/RpoA insert domain BJD94_RS10915 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BJD94_RS10920 PF00163 Ribosomal protein S4/S9 N-terminal domain BJD94_RS10920 PF01479 S4 domain BJD94_RS10925 PF00411 Ribosomal protein S11 BJD94_RS10930 PF00416 Ribosomal protein S13/S18 BJD94_RS10935 PF00444 Ribosomal protein L36 BJD94_RS10940 PF00344 SecY translocase BJD94_RS10945 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BJD94_RS10950 PF00327 Ribosomal protein L30p/L7e BJD94_RS10955 PF03719 Ribosomal protein S5, C-terminal domain BJD94_RS10955 PF00333 Ribosomal protein S5, N-terminal domain BJD94_RS10960 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BJD94_RS10965 PF00347 Ribosomal protein L6 BJD94_RS10970 PF00410 Ribosomal protein S8 BJD94_RS10975 PF00253 Ribosomal protein S14p/S29e BJD94_RS10980 PF00281 Ribosomal protein L5 BJD94_RS10980 PF00673 ribosomal L5P family C-terminus BJD94_RS10985 PF00467 KOW motif BJD94_RS10985 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BJD94_RS10990 PF00238 Ribosomal protein L14p/L23e BJD94_RS10995 PF00366 Ribosomal protein S17 BJD94_RS11000 PF00831 Ribosomal L29 protein BJD94_RS11005 PF00252 Ribosomal protein L16p/L10e BJD94_RS11010 PF00189 Ribosomal protein S3, C-terminal domain BJD94_RS11010 PF07650 KH domain BJD94_RS11015 PF00237 Ribosomal protein L22p/L17e BJD94_RS11020 PF00203 Ribosomal protein S19 BJD94_RS11025 PF00181 Ribosomal Proteins L2, RNA binding domain BJD94_RS11025 PF03947 Ribosomal Proteins L2, C-terminal domain BJD94_RS11030 PF00276 Ribosomal protein L23 BJD94_RS11035 PF00573 Ribosomal protein L4/L1 family BJD94_RS11040 PF00297 Ribosomal protein L3 BJD94_RS11045 PF00338 Ribosomal protein S10p/S20e BJD94_RS11075 PF17291 N-terminal domain of M60-like peptidases BJD94_RS11075 PF13322 Domain of unknown function (DUF4092) BJD94_RS11075 PF13402 Peptidase M60, enhancin and enhancin-like BJD94_RS11100 PF10996 Beta-Casp domain BJD94_RS11100 PF00753 Metallo-beta-lactamase superfamily BJD94_RS11100 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BJD94_RS11125 PF00483 Nucleotidyl transferase BJD94_RS11130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJD94_RS11130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJD94_RS11130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJD94_RS11135 PF00953 Glycosyl transferase family 4 BJD94_RS11140 PF01238 Phosphomannose isomerase type I BJD94_RS11145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD94_RS11145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD94_RS11145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD94_RS11145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD94_RS11150 PF01050 Mannose-6-phosphate isomerase BJD94_RS11150 PF00483 Nucleotidyl transferase BJD94_RS11155 PF00534 Glycosyl transferases group 1 BJD94_RS11155 PF13439 Glycosyltransferase Family 4 BJD94_RS11200 PF13807 G-rich domain on putative tyrosine kinase BJD94_RS11200 PF13614 AAA domain BJD94_RS11200 PF02706 Chain length determinant protein BJD94_RS11205 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJD94_RS11215 PF10531 SLBB domain BJD94_RS11215 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BJD94_RS11215 PF02563 Polysaccharide biosynthesis/export protein BJD94_RS11260 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF BJD94_RS11270 PF06082 Exopolysaccharide biosynthesis protein YbjH BJD94_RS11275 PF01370 NAD dependent epimerase/dehydratase family BJD94_RS11280 PF03279 Bacterial lipid A biosynthesis acyltransferase BJD94_RS11285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BJD94_RS11290 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BJD94_RS11300 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS11310 PF02348 Cytidylyltransferase BJD94_RS11320 PF00483 Nucleotidyl transferase BJD94_RS11330 PF03102 NeuB family BJD94_RS11330 PF08666 SAF domain BJD94_RS11335 PF02350 UDP-N-acetylglucosamine 2-epimerase BJD94_RS11340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD94_RS11345 PF02719 Polysaccharide biosynthesis protein BJD94_RS11355 PF02709 N-terminal domain of galactosyltransferase BJD94_RS11355 PF00535 Glycosyl transferase family 2 BJD94_RS11360 PF00535 Glycosyl transferase family 2 BJD94_RS11375 PF00793 DAHP synthetase I family BJD94_RS11380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD94_RS11385 PF00483 Nucleotidyl transferase BJD94_RS11390 PF16363 GDP-mannose 4,6 dehydratase BJD94_RS11395 PF00884 Sulfatase BJD94_RS11395 PF11893 Domain of unknown function (DUF3413) BJD94_RS11405 PF01219 Prokaryotic diacylglycerol kinase BJD94_RS11410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BJD94_RS11415 PF00535 Glycosyl transferase family 2 BJD94_RS11420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BJD94_RS11425 PF01467 Cytidylyltransferase-like BJD94_RS11435 PF06827 Zinc finger found in FPG and IleRS BJD94_RS11435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BJD94_RS11435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD94_RS11445 PF00471 Ribosomal protein L33 BJD94_RS11450 PF00830 Ribosomal L28 family BJD94_RS11455 PF04002 RadC-like JAB domain BJD94_RS11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS11460 PF00672 HAMP domain BJD94_RS11460 PF02743 Cache domain BJD94_RS11465 PF04127 DNA / pantothenate metabolism flavoprotein BJD94_RS11465 PF02441 Flavoprotein BJD94_RS11470 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS11475 PF03279 Bacterial lipid A biosynthesis acyltransferase BJD94_RS11480 PF00156 Phosphoribosyl transferase domain BJD94_RS11485 PF01138 3' exoribonuclease family, domain 1 BJD94_RS11485 PF03725 3' exoribonuclease family, domain 2 BJD94_RS11490 PF08340 Domain of unknown function (DUF1732) BJD94_RS11490 PF03755 YicC-like family, N-terminal region BJD94_RS11500 PF13411 MerR HTH family regulatory protein BJD94_RS11505 PF07516 SecA Wing and Scaffold domain BJD94_RS11505 PF07517 SecA DEAD-like domain BJD94_RS11505 PF01043 SecA preprotein cross-linking domain BJD94_RS11505 PF02810 SEC-C motif BJD94_RS11520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS11520 PF00005 ABC transporter BJD94_RS11525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS11525 PF00005 ABC transporter BJD94_RS11530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS11535 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS11535 PF12911 N-terminal TM domain of oligopeptide transport permease C BJD94_RS11540 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS11545 PF00593 TonB dependent receptor BJD94_RS11545 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS11555 PF01618 MotA/TolQ/ExbB proton channel family BJD94_RS11560 PF01618 MotA/TolQ/ExbB proton channel family BJD94_RS11565 PF02472 Biopolymer transport protein ExbD/TolR BJD94_RS11580 PF00625 Guanylate kinase BJD94_RS11585 PF01192 RNA polymerase Rpb6 BJD94_RS11590 PF13291 ACT domain BJD94_RS11590 PF04607 Region found in RelA / SpoT proteins BJD94_RS11590 PF02824 TGS domain BJD94_RS11595 PF00588 SpoU rRNA Methylase family BJD94_RS11595 PF12105 SpoU, rRNA methylase, C-terminal BJD94_RS11600 PF00271 Helicase conserved C-terminal domain BJD94_RS11600 PF17191 RecG wedge domain BJD94_RS11600 PF00270 DEAD/DEAH box helicase BJD94_RS11605 PF00860 Permease family BJD94_RS11610 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS11610 PF00672 HAMP domain BJD94_RS11615 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS11615 PF00072 Response regulator receiver domain BJD94_RS11620 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD94_RS11620 PF03449 Transcription elongation factor, N-terminal BJD94_RS11625 PF16921 Tex protein YqgF-like domain BJD94_RS11625 PF09371 Tex-like protein N-terminal domain BJD94_RS11625 PF17674 HHH domain BJD94_RS11625 PF00575 S1 RNA binding domain BJD94_RS11635 PF00561 alpha/beta hydrolase fold BJD94_RS11645 PF01106 NifU-like domain BJD94_RS11645 PF01521 Iron-sulphur cluster biosynthesis BJD94_RS11650 PF00293 NUDIX domain BJD94_RS11655 PF00459 Inositol monophosphatase family BJD94_RS11660 PF01203 Type II secretion system (T2SS), protein N BJD94_RS11665 PF04612 Type II secretion system (T2SS), protein M BJD94_RS11670 PF05134 Type II secretion system (T2SS), protein L BJD94_RS11670 PF12693 GspL periplasmic domain BJD94_RS11675 PF03934 Type II secretion system (T2SS), protein K BJD94_RS11680 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS11680 PF11612 Type II secretion system (T2SS), protein J BJD94_RS11685 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS11685 PF02501 Type II secretion system (T2SS), protein I BJD94_RS11690 PF12019 Type II transport protein GspH BJD94_RS11695 PF08334 Type II secretion system (T2SS), protein G BJD94_RS11695 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS11700 PF00482 Type II secretion system (T2SS), protein F BJD94_RS11705 PF00437 Type II/IV secretion system protein BJD94_RS11710 PF03958 Bacterial type II/III secretion system short domain BJD94_RS11710 PF00263 Bacterial type II and III secretion system protein BJD94_RS11715 PF11356 Type II secretion system protein C BJD94_RS11720 PF01479 S4 domain BJD94_RS11725 PF01430 Hsp33 protein BJD94_RS11730 PF01293 Phosphoenolpyruvate carboxykinase BJD94_RS11740 PF00583 Acetyltransferase (GNAT) family BJD94_RS11740 PF09500 Putative thioesterase (yiiD_Cterm) BJD94_RS11745 PF02580 D-Tyr-tRNA(Tyr) deacylase BJD94_RS11750 PF03631 Virulence factor BrkB BJD94_RS11760 PF03668 P-loop ATPase protein family BJD94_RS11765 PF03144 Elongation factor Tu domain 2 BJD94_RS11765 PF00009 Elongation factor Tu GTP binding domain BJD94_RS11765 PF00679 Elongation factor G C-terminus BJD94_RS11775 PF00120 Glutamine synthetase, catalytic domain BJD94_RS11775 PF03951 Glutamine synthetase, beta-Grasp domain BJD94_RS11785 PF00989 PAS fold BJD94_RS11785 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS11790 PF02954 Bacterial regulatory protein, Fis family BJD94_RS11790 PF00158 Sigma-54 interaction domain BJD94_RS11790 PF00072 Response regulator receiver domain BJD94_RS11795 PF00563 EAL domain BJD94_RS11795 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS11795 PF13188 PAS domain BJD94_RS11795 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS11800 PF06969 HemN C-terminal domain BJD94_RS11800 PF04055 Radical SAM superfamily BJD94_RS11805 PF10675 Protein of unknown function (DUF2489) BJD94_RS11810 PF04220 Der GTPase activator (YihI) BJD94_RS11820 PF00034 Cytochrome c BJD94_RS11825 PF01926 50S ribosome-binding GTPase BJD94_RS11830 PF01612 3'-5' exonuclease BJD94_RS11830 PF00476 DNA polymerase family A BJD94_RS11830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BJD94_RS11830 PF01367 5'-3' exonuclease, C-terminal SAM fold BJD94_RS11835 PF00490 Delta-aminolevulinic acid dehydratase BJD94_RS11840 PF01026 TatD related DNase BJD94_RS11845 PF00902 Sec-independent protein translocase protein (TatC) BJD94_RS11850 PF02416 mttA/Hcf106 family BJD94_RS11855 PF02416 mttA/Hcf106 family BJD94_RS11860 PF03109 ABC1 family BJD94_RS11865 PF02036 SCP-2 sterol transfer family BJD94_RS11870 PF01209 ubiE/COQ5 methyltransferase family BJD94_RS11875 PF02646 RmuC family BJD94_RS11950 PF00175 Oxidoreductase NAD-binding domain BJD94_RS11955 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD94_RS11955 PF00175 Oxidoreductase NAD-binding domain BJD94_RS11955 PF00970 Oxidoreductase FAD-binding domain BJD94_RS11960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BJD94_RS11970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD94_RS11970 PF07498 Rho termination factor, N-terminal domain BJD94_RS11970 PF07497 Rho termination factor, RNA-binding domain BJD94_RS11975 PF00085 Thioredoxin BJD94_RS11980 PF00271 Helicase conserved C-terminal domain BJD94_RS11980 PF00270 DEAD/DEAH box helicase BJD94_RS11985 PF02541 Ppx/GppA phosphatase family BJD94_RS11990 PF02592 Putative vitamin uptake transporter BJD94_RS12000 PF00270 DEAD/DEAH box helicase BJD94_RS12000 PF00570 HRDC domain BJD94_RS12000 PF09382 RQC domain BJD94_RS12000 PF00271 Helicase conserved C-terminal domain BJD94_RS12000 PF16124 RecQ zinc-binding BJD94_RS12005 PF00892 EamA-like transporter family BJD94_RS12015 PF01810 LysE type translocator BJD94_RS12025 PF13361 UvrD-like helicase C-terminal domain BJD94_RS12025 PF00580 UvrD/REP helicase N-terminal domain BJD94_RS12035 PF05114 Protein of unknown function (DUF692) BJD94_RS12055 PF07690 Major Facilitator Superfamily BJD94_RS12060 PF03466 LysR substrate binding domain BJD94_RS12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS12065 PF00557 Metallopeptidase family M24 BJD94_RS12065 PF00557 Metallopeptidase family M24 BJD94_RS12065 PF01321 Creatinase/Prolidase N-terminal domain BJD94_RS12065 PF01321 Creatinase/Prolidase N-terminal domain BJD94_RS12070 PF06968 Biotin and Thiamin Synthesis associated domain BJD94_RS12070 PF04055 Radical SAM superfamily BJD94_RS12075 PF05690 Thiazole biosynthesis protein ThiG BJD94_RS12085 PF00899 ThiF family BJD94_RS12090 PF02581 Thiamine monophosphate synthase BJD94_RS12095 PF01964 Radical SAM ThiC family BJD94_RS12095 PF13667 ThiC-associated domain BJD94_RS12100 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BJD94_RS12105 PF07731 Multicopper oxidase BJD94_RS12105 PF00394 Multicopper oxidase BJD94_RS12105 PF07732 Multicopper oxidase BJD94_RS12140 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS12145 PF07369 Protein of unknown function (DUF1488) BJD94_RS12150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BJD94_RS12150 PF08501 Shikimate dehydrogenase substrate binding domain BJD94_RS12150 PF01488 Shikimate / quinate 5-dehydrogenase BJD94_RS12155 PF01218 Coproporphyrinogen III oxidase BJD94_RS12160 PF01300 Telomere recombination BJD94_RS12165 PF00731 AIR carboxylase BJD94_RS12170 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BJD94_RS12170 PF02222 ATP-grasp domain BJD94_RS12175 PF01396 Topoisomerase DNA binding C4 zinc finger BJD94_RS12180 PF04361 Protein of unknown function (DUF494) BJD94_RS12185 PF17782 DprA winged helix domain BJD94_RS12185 PF02481 DNA recombination-mediator protein A BJD94_RS12195 PF01327 Polypeptide deformylase BJD94_RS12200 PF00551 Formyl transferase BJD94_RS12200 PF02911 Formyl transferase, C-terminal domain BJD94_RS12205 PF01189 16S rRNA methyltransferase RsmB/F BJD94_RS12205 PF01029 NusB family BJD94_RS12210 PF02254 TrkA-N domain BJD94_RS12210 PF02080 TrkA-C domain BJD94_RS12215 PF02386 Cation transport protein BJD94_RS12220 PF03006 Haemolysin-III related BJD94_RS12225 PF07070 SpoOM protein BJD94_RS12230 PF06288 Protein of unknown function (DUF1040) BJD94_RS12235 PF12801 4Fe-4S binding domain BJD94_RS12235 PF13746 4Fe-4S dicluster domain BJD94_RS12235 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BJD94_RS12240 PF01636 Phosphotransferase enzyme family BJD94_RS12245 PF01323 DSBA-like thioredoxin domain BJD94_RS12250 PF01553 Acyltransferase BJD94_RS12260 PF13335 Magnesium chelatase, subunit ChlI C-terminal BJD94_RS12260 PF01078 Magnesium chelatase, subunit ChlI BJD94_RS12265 PF00205 Thiamine pyrophosphate enzyme, central domain BJD94_RS12265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJD94_RS12265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJD94_RS12275 PF01063 Amino-transferase class IV BJD94_RS12280 PF00920 Dehydratase family BJD94_RS12285 PF00585 C-terminal regulatory domain of Threonine dehydratase BJD94_RS12285 PF00291 Pyridoxal-phosphate dependent enzyme BJD94_RS12290 PF03466 LysR substrate binding domain BJD94_RS12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS12295 PF07690 Major Facilitator Superfamily BJD94_RS12300 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS12305 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS12310 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS12310 PF12804 MobA-like NTP transferase domain BJD94_RS12315 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BJD94_RS12315 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BJD94_RS12320 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD94_RS12320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD94_RS12325 PF00231 ATP synthase BJD94_RS12330 PF00306 ATP synthase alpha/beta chain, C terminal domain BJD94_RS12330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD94_RS12330 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD94_RS12335 PF00213 ATP synthase delta (OSCP) subunit BJD94_RS12340 PF00430 ATP synthase B/B' CF(0) BJD94_RS12345 PF00137 ATP synthase subunit C BJD94_RS12350 PF00119 ATP synthase A chain BJD94_RS12355 PF03899 ATP synthase I chain BJD94_RS12360 PF02195 ParB-like nuclease domain BJD94_RS12360 PF17762 HTH domain found in ParB protein BJD94_RS12365 PF13614 AAA domain BJD94_RS12370 PF02527 rRNA small subunit methyltransferase G BJD94_RS12375 PF01134 Glucose inhibited division protein A BJD94_RS12375 PF13932 GidA associated domain BJD94_RS12385 PF00258 Flavodoxin BJD94_RS12390 PF10396 GTP-binding protein TrmE N-terminus BJD94_RS12390 PF12631 MnmE helical domain BJD94_RS12390 PF01926 50S ribosome-binding GTPase BJD94_RS12395 PF02096 60Kd inner membrane protein BJD94_RS12395 PF14849 YidC periplasmic domain BJD94_RS12400 PF01809 Putative membrane protein insertion efficiency factor BJD94_RS12405 PF00825 Ribonuclease P BJD94_RS12410 PF00468 Ribosomal protein L34 BJD94_RS12415 PF00005 ABC transporter BJD94_RS12420 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS12425 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS12430 PF11638 DnaA N-terminal domain BJD94_RS12430 PF00308 Bacterial dnaA protein BJD94_RS12430 PF08299 Bacterial dnaA protein helix-turn-helix BJD94_RS12435 PF00712 DNA polymerase III beta subunit, N-terminal domain BJD94_RS12435 PF02767 DNA polymerase III beta subunit, central domain BJD94_RS12435 PF02768 DNA polymerase III beta subunit, C-terminal domain BJD94_RS12440 PF02463 RecF/RecN/SMC N terminal domain BJD94_RS12445 PF00986 DNA gyrase B subunit, carboxyl terminus BJD94_RS12445 PF18053 DNA gyrase B subunit insert domain BJD94_RS12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS12445 PF01751 Toprim domain BJD94_RS12445 PF00204 DNA gyrase B BJD94_RS12450 PF00011 Hsp20/alpha crystallin family BJD94_RS12455 PF00563 EAL domain BJD94_RS12455 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS12455 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS12460 PF00155 Aminotransferase class I and II BJD94_RS12470 PF02092 Glycyl-tRNA synthetase beta subunit BJD94_RS12470 PF05746 DALR anticodon binding domain BJD94_RS12475 PF02091 Glycyl-tRNA synthetase alpha subunit BJD94_RS12480 PF01169 Uncharacterized protein family UPF0016 BJD94_RS12490 PF01206 Sulfurtransferase TusA BJD94_RS12500 PF03466 LysR substrate binding domain BJD94_RS12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS12505 PF08240 Alcohol dehydrogenase GroES-like domain BJD94_RS12505 PF00107 Zinc-binding dehydrogenase BJD94_RS12510 PF02803 Thiolase, C-terminal domain BJD94_RS12510 PF00108 Thiolase, N-terminal domain BJD94_RS12515 PF00378 Enoyl-CoA hydratase/isomerase BJD94_RS12515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD94_RS12515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD94_RS12520 PF01205 Uncharacterized protein family UPF0029 BJD94_RS12520 PF09186 Domain of unknown function (DUF1949) BJD94_RS12525 PF02386 Cation transport protein BJD94_RS12530 PF12724 Flavodoxin domain BJD94_RS12575 PF03466 LysR substrate binding domain BJD94_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS12580 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BJD94_RS12580 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BJD94_RS12585 PF04380 Membrane fusogenic activity BJD94_RS12590 PF00873 AcrB/AcrD/AcrF family BJD94_RS12595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS12600 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS12605 PF13361 UvrD-like helicase C-terminal domain BJD94_RS12605 PF00580 UvrD/REP helicase N-terminal domain BJD94_RS12610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BJD94_RS12640 PF00005 ABC transporter BJD94_RS12640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS12645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS12650 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS12655 PF12911 N-terminal TM domain of oligopeptide transport permease C BJD94_RS12655 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS12690 PF03793 PASTA domain BJD94_RS12690 PF00069 Protein kinase domain BJD94_RS12700 PF00072 Response regulator receiver domain BJD94_RS12705 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS12705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BJD94_RS12710 PF00920 Dehydratase family BJD94_RS12715 PF01202 Shikimate kinase BJD94_RS12720 PF02447 GntP family permease BJD94_RS12725 PF01081 KDPG and KHG aldolase BJD94_RS12740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD94_RS12740 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS12745 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BJD94_RS12750 PF01432 Peptidase family M3 BJD94_RS12755 PF01037 Lrp/AsnC ligand binding domain BJD94_RS12760 PF00563 EAL domain BJD94_RS12760 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS12760 PF08448 PAS fold BJD94_RS12765 PF04445 Putative SAM-dependent methyltransferase BJD94_RS12775 PF00892 EamA-like transporter family BJD94_RS12780 PF00582 Universal stress protein family BJD94_RS12785 PF00210 Ferritin-like domain BJD94_RS12790 PF10625 Universal stress protein B (UspB) BJD94_RS12805 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BJD94_RS12810 PF02602 Uroporphyrinogen-III synthase HemD BJD94_RS12815 PF03900 Porphobilinogen deaminase, C-terminal domain BJD94_RS12815 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BJD94_RS12820 PF12633 Adenylate cyclase NT domain BJD94_RS12820 PF01295 Adenylate cyclase, class-I BJD94_RS12825 PF01491 Frataxin-like domain BJD94_RS12835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BJD94_RS12835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJD94_RS12840 PF01678 Diaminopimelate epimerase BJD94_RS12850 PF00589 Phage integrase family BJD94_RS12850 PF02899 Phage integrase, N-terminal SAM-like domain BJD94_RS12855 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS12860 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS12860 PF10442 FIST C domain BJD94_RS12860 PF08495 FIST N domain BJD94_RS12860 PF00563 EAL domain BJD94_RS12865 PF03942 DTW domain BJD94_RS12885 PF12146 Serine aminopeptidase, S33 BJD94_RS12890 PF01810 LysE type translocator BJD94_RS12895 PF08668 HDOD domain BJD94_RS12895 PF00563 EAL domain BJD94_RS12900 PF01022 Bacterial regulatory protein, arsR family BJD94_RS12905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD94_RS12905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJD94_RS12950 PF01914 MarC family integral membrane protein BJD94_RS12965 PF00448 SRP54-type protein, GTPase domain BJD94_RS12965 PF02881 SRP54-type protein, helical bundle domain BJD94_RS12970 PF00005 ABC transporter BJD94_RS12975 PF18075 FtsX extracellular domain BJD94_RS12980 PF04542 Sigma-70 region 2 BJD94_RS12980 PF00140 Sigma-70 factor, region 1.2 BJD94_RS12980 PF04545 Sigma-70, region 4 BJD94_RS12985 PF00581 Rhodanese-like domain BJD94_RS12990 PF01694 Rhomboid family BJD94_RS12990 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BJD94_RS12995 PF03748 Flagellar basal body-associated protein FliL BJD94_RS13000 PF04345 Chorismate lyase BJD94_RS13005 PF01040 UbiA prenyltransferase family BJD94_RS13010 PF01553 Acyltransferase BJD94_RS13020 PF00717 Peptidase S24-like BJD94_RS13020 PF01726 LexA DNA binding domain BJD94_RS13030 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS13030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD94_RS13035 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS13045 PF05958 tRNA (Uracil-5-)-methyltransferase BJD94_RS13050 PF00593 TonB dependent receptor BJD94_RS13050 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS13060 PF01177 Asp/Glu/Hydantoin racemase BJD94_RS13130 PF13358 DDE superfamily endonuclease BJD94_RS13145 PF13091 PLD-like domain BJD94_RS13155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BJD94_RS13155 PF01565 FAD binding domain BJD94_RS13160 PF03099 Biotin/lipoate A/B protein ligase family BJD94_RS13160 PF02237 Biotin protein ligase C terminal domain BJD94_RS13160 PF08279 HTH domain BJD94_RS13165 PF00485 Phosphoribulokinase / Uridine kinase family BJD94_RS13195 PF00009 Elongation factor Tu GTP binding domain BJD94_RS13195 PF03143 Elongation factor Tu C-terminal domain BJD94_RS13195 PF03144 Elongation factor Tu domain 2 BJD94_RS13200 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BJD94_RS13205 PF02357 Transcription termination factor nusG BJD94_RS13205 PF00467 KOW motif BJD94_RS13210 PF00298 Ribosomal protein L11, RNA binding domain BJD94_RS13210 PF03946 Ribosomal protein L11, N-terminal domain BJD94_RS13215 PF00687 Ribosomal protein L1p/L10e family BJD94_RS13220 PF00466 Ribosomal protein L10 BJD94_RS13225 PF00542 Ribosomal protein L7/L12 C-terminal domain BJD94_RS13225 PF16320 Ribosomal protein L7/L12 dimerisation domain BJD94_RS13230 PF10385 RNA polymerase beta subunit external 1 domain BJD94_RS13230 PF04565 RNA polymerase Rpb2, domain 3 BJD94_RS13230 PF04561 RNA polymerase Rpb2, domain 2 BJD94_RS13230 PF00562 RNA polymerase Rpb2, domain 6 BJD94_RS13230 PF04563 RNA polymerase beta subunit BJD94_RS13230 PF04560 RNA polymerase Rpb2, domain 7 BJD94_RS13235 PF04983 RNA polymerase Rpb1, domain 3 BJD94_RS13235 PF04997 RNA polymerase Rpb1, domain 1 BJD94_RS13235 PF04998 RNA polymerase Rpb1, domain 5 BJD94_RS13235 PF05000 RNA polymerase Rpb1, domain 4 BJD94_RS13235 PF00623 RNA polymerase Rpb1, domain 2 BJD94_RS13240 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BJD94_RS13245 PF00293 NUDIX domain BJD94_RS13245 PF09297 NADH pyrophosphatase zinc ribbon domain BJD94_RS13260 PF01208 Uroporphyrinogen decarboxylase (URO-D) BJD94_RS13265 PF03167 Uracil DNA glycosylase superfamily BJD94_RS13275 PF04222 Protein of unknown function (DUF416) BJD94_RS13280 PF01595 Cyclin M transmembrane N-terminal domain BJD94_RS13280 PF00571 CBS domain BJD94_RS13285 PF00216 Bacterial DNA-binding protein BJD94_RS13295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BJD94_RS13295 PF02843 Phosphoribosylglycinamide synthetase, C domain BJD94_RS13295 PF02844 Phosphoribosylglycinamide synthetase, N domain BJD94_RS13300 PF01808 AICARFT/IMPCHase bienzyme BJD94_RS13300 PF02142 MGS-like domain BJD94_RS13305 PF13411 MerR HTH family regulatory protein BJD94_RS13310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS13310 PF17200 Single Cache domain 2 BJD94_RS13310 PF00672 HAMP domain BJD94_RS13315 PF02954 Bacterial regulatory protein, Fis family BJD94_RS13320 PF01207 Dihydrouridine synthase (Dus) BJD94_RS13330 PF02785 Biotin carboxylase C-terminal domain BJD94_RS13330 PF00289 Biotin carboxylase, N-terminal domain BJD94_RS13330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD94_RS13335 PF00364 Biotin-requiring enzyme BJD94_RS13340 PF01220 Dehydroquinase class II BJD94_RS13345 PF16177 Acetyl-coenzyme A synthetase N-terminus BJD94_RS13345 PF00501 AMP-binding enzyme BJD94_RS13345 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS13360 PF12832 MFS_1 like family BJD94_RS13365 PF00072 Response regulator receiver domain BJD94_RS13365 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS13365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS13365 PF01627 Hpt domain BJD94_RS13365 PF00672 HAMP domain BJD94_RS13380 PF00474 Sodium:solute symporter family BJD94_RS13390 PF01914 MarC family integral membrane protein BJD94_RS13395 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS13395 PF00072 Response regulator receiver domain BJD94_RS13400 PF02683 Cytochrome C biogenesis protein transmembrane region BJD94_RS13400 PF11412 Disulphide bond corrector protein DsbC BJD94_RS13405 PF03605 Anaerobic c4-dicarboxylate membrane transporter BJD94_RS13410 PF00206 Lyase BJD94_RS13410 PF10415 Fumarase C C-terminus BJD94_RS13415 PF04186 FxsA cytoplasmic membrane protein BJD94_RS13420 PF00588 SpoU rRNA Methylase family BJD94_RS13425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BJD94_RS13425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BJD94_RS13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS13430 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS13430 PF00672 HAMP domain BJD94_RS13430 PF16527 Two-component sensor protein CpxA, periplasmic domain BJD94_RS13435 PF00072 Response regulator receiver domain BJD94_RS13435 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS13440 PF07813 LTXXQ motif family protein BJD94_RS13445 PF01545 Cation efflux family BJD94_RS13445 PF16916 Dimerisation domain of Zinc Transporter BJD94_RS13450 PF00365 Phosphofructokinase BJD94_RS13455 PF01554 MatE BJD94_RS13460 PF00166 Chaperonin 10 Kd subunit BJD94_RS13465 PF00118 TCP-1/cpn60 chaperonin family BJD94_RS13475 PF02308 MgtC family BJD94_RS13480 PF04055 Radical SAM superfamily BJD94_RS13485 PF09285 Elongation factor P, C-terminal BJD94_RS13485 PF01132 Elongation factor P (EF-P) OB domain BJD94_RS13485 PF08207 Elongation factor P (EF-P) KOW-like domain BJD94_RS13495 PF02313 Fumarate reductase subunit D BJD94_RS13500 PF02300 Fumarate reductase subunit C BJD94_RS13505 PF13183 4Fe-4S dicluster domain BJD94_RS13505 PF13085 2Fe-2S iron-sulfur cluster binding domain BJD94_RS13510 PF02910 Fumarate reductase flavoprotein C-term BJD94_RS13510 PF00890 FAD binding domain BJD94_RS13515 PF00152 tRNA synthetases class II (D, K and N) BJD94_RS13525 PF08360 QacR-like protein, C-terminal region BJD94_RS13525 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS13535 PF01551 Peptidase family M23 BJD94_RS13540 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS13540 PF06426 Serine acetyltransferase, N-terminal BJD94_RS13545 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BJD94_RS13545 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BJD94_RS13550 PF02556 Preprotein translocase subunit SecB BJD94_RS13555 PF00581 Rhodanese-like domain BJD94_RS13565 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BJD94_RS13565 PF01676 Metalloenzyme superfamily BJD94_RS13575 PF00939 Sodium:sulfate symporter transmembrane region BJD94_RS13580 PF02666 Phosphatidylserine decarboxylase BJD94_RS13585 PF03193 RsgA GTPase BJD94_RS13590 PF00929 Exonuclease BJD94_RS13650 PF08331 Domain of unknown function (DUF1730) BJD94_RS13655 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BJD94_RS13660 PF01520 N-acetylmuramoyl-L-alanine amidase BJD94_RS13665 PF08676 MutL C terminal dimerisation domain BJD94_RS13665 PF01119 DNA mismatch repair protein, C-terminal domain BJD94_RS13675 PF17209 Hfq protein BJD94_RS13680 PF01926 50S ribosome-binding GTPase BJD94_RS13680 PF16360 GTP-binding GTPase Middle Region BJD94_RS13680 PF13167 GTP-binding GTPase N-terminal BJD94_RS13685 PF12221 Bacterial membrane protein N terminal BJD94_RS13685 PF01145 SPFH domain / Band 7 family BJD94_RS13690 PF01145 SPFH domain / Band 7 family BJD94_RS13695 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BJD94_RS13700 PF00709 Adenylosuccinate synthetase BJD94_RS13705 PF08238 Sel1 repeat BJD94_RS13710 PF00175 Oxidoreductase NAD-binding domain BJD94_RS13710 PF00970 Oxidoreductase FAD-binding domain BJD94_RS13710 PF00042 Globin BJD94_RS13715 PF02082 Transcriptional regulator BJD94_RS13720 PF01979 Amidohydrolase family BJD94_RS13725 PF00773 RNB domain BJD94_RS13725 PF08206 Ribonuclease B OB domain BJD94_RS13725 PF17876 Cold shock domain BJD94_RS13725 PF08461 Ribonuclease R winged-helix domain BJD94_RS13725 PF00575 S1 RNA binding domain BJD94_RS13730 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJD94_RS13730 PF00588 SpoU rRNA Methylase family BJD94_RS13735 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS13740 PF00579 tRNA synthetases class I (W and Y) BJD94_RS13755 PF00117 Glutamine amidotransferase class-I BJD94_RS13760 PF00202 Aminotransferase class-III BJD94_RS13765 PF04958 Arginine N-succinyltransferase beta subunit BJD94_RS13770 PF00171 Aldehyde dehydrogenase family BJD94_RS13780 PF13545 Crp-like helix-turn-helix domain BJD94_RS13780 PF00027 Cyclic nucleotide-binding domain BJD94_RS13785 PF00485 Phosphoribulokinase / Uridine kinase family BJD94_RS13790 PF06794 Uncharacterised protein family (UPF0270) BJD94_RS13795 PF00561 alpha/beta hydrolase fold BJD94_RS13805 PF00005 ABC transporter BJD94_RS13805 PF12848 ABC transporter BJD94_RS13810 PF02525 Flavodoxin-like fold BJD94_RS13815 PF00999 Sodium/hydrogen exchanger family BJD94_RS13815 PF02254 TrkA-N domain BJD94_RS13825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD94_RS13830 PF01112 Asparaginase BJD94_RS13835 PF04102 SlyX BJD94_RS13845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJD94_RS13845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD94_RS13850 PF13309 HTH domain BJD94_RS13850 PF08348 YheO-like PAS domain BJD94_RS13855 PF02635 DsrE/DsrF-like family BJD94_RS13860 PF02635 DsrE/DsrF-like family BJD94_RS13870 PF00164 Ribosomal protein S12/S23 BJD94_RS13875 PF00177 Ribosomal protein S7p/S5e BJD94_RS13880 PF14492 Elongation Factor G, domain II BJD94_RS13880 PF03144 Elongation factor Tu domain 2 BJD94_RS13880 PF03764 Elongation factor G, domain IV BJD94_RS13880 PF00009 Elongation factor Tu GTP binding domain BJD94_RS13880 PF00679 Elongation factor G C-terminus BJD94_RS13885 PF03144 Elongation factor Tu domain 2 BJD94_RS13885 PF03143 Elongation factor Tu C-terminal domain BJD94_RS13885 PF00009 Elongation factor Tu GTP binding domain BJD94_RS13890 PF04324 BFD-like [2Fe-2S] binding domain BJD94_RS13895 PF00210 Ferritin-like domain BJD94_RS13900 PF16363 GDP-mannose 4,6 dehydratase BJD94_RS13905 PF00121 Triosephosphate isomerase BJD94_RS13930 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BJD94_RS13940 PF06005 Cell division protein ZapB BJD94_RS13945 PF03737 Aldolase/RraA BJD94_RS13950 PF01040 UbiA prenyltransferase family BJD94_RS13955 PF07724 AAA domain (Cdc48 subfamily) BJD94_RS13955 PF00004 ATPase family associated with various cellular activities (AAA) BJD94_RS13955 PF10431 C-terminal, D2-small domain, of ClpB protein BJD94_RS13960 PF00227 Proteasome subunit BJD94_RS13970 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS13975 PF00271 Helicase conserved C-terminal domain BJD94_RS13975 PF17764 3′ DNA-binding domain (3′BD) BJD94_RS13975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BJD94_RS13975 PF00270 DEAD/DEAH box helicase BJD94_RS13975 PF18074 Primosomal protein N C-terminal domain BJD94_RS13980 PF01197 Ribosomal protein L31 BJD94_RS13985 PF00390 Malic enzyme, N-terminal domain BJD94_RS13985 PF03949 Malic enzyme, NAD binding domain BJD94_RS13990 PF01340 Met Apo-repressor, MetJ BJD94_RS13995 PF01053 Cys/Met metabolism PLP-dependent enzyme BJD94_RS14000 PF03447 Homoserine dehydrogenase, NAD binding domain BJD94_RS14000 PF00742 Homoserine dehydrogenase BJD94_RS14000 PF00696 Amino acid kinase family BJD94_RS14005 PF02219 Methylenetetrahydrofolate reductase BJD94_RS14015 PF00311 Phosphoenolpyruvate carboxylase BJD94_RS14020 PF01546 Peptidase family M20/M25/M40 BJD94_RS14020 PF07687 Peptidase dimerisation domain BJD94_RS14025 PF02774 Semialdehyde dehydrogenase, dimerisation domain BJD94_RS14025 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJD94_RS14030 PF00696 Amino acid kinase family BJD94_RS14035 PF00764 Arginosuccinate synthase BJD94_RS14040 PF00206 Lyase BJD94_RS14040 PF14698 Argininosuccinate lyase C-terminal BJD94_RS14040 PF00583 Acetyltransferase (GNAT) family BJD94_RS14050 PF03466 LysR substrate binding domain BJD94_RS14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS14055 PF00905 Penicillin binding protein transpeptidase domain BJD94_RS14055 PF00912 Transglycosylase BJD94_RS14055 PF17092 Penicillin-binding protein OB-like domain BJD94_RS14080 PF00263 Bacterial type II and III secretion system protein BJD94_RS14080 PF11741 AMIN domain BJD94_RS14080 PF03958 Bacterial type II/III secretion system short domain BJD94_RS14080 PF07660 Secretin and TonB N terminus short domain BJD94_RS14085 PF01202 Shikimate kinase BJD94_RS14090 PF01761 3-dehydroquinate synthase BJD94_RS14100 PF02086 D12 class N6 adenine-specific DNA methyltransferase BJD94_RS14105 PF00834 Ribulose-phosphate 3 epimerase family BJD94_RS14110 PF01250 Ribosomal protein S6 BJD94_RS14115 PF00436 Single-strand binding protein family BJD94_RS14120 PF01084 Ribosomal protein S18 BJD94_RS14125 PF03948 Ribosomal protein L9, C-terminal domain BJD94_RS14125 PF01281 Ribosomal protein L9, N-terminal domain BJD94_RS14135 PF00772 DnaB-like helicase N terminal domain BJD94_RS14135 PF03796 DnaB-like helicase C terminal domain BJD94_RS14140 PF01168 Alanine racemase, N-terminal domain BJD94_RS14140 PF00842 Alanine racemase, C-terminal domain BJD94_RS14150 PF01894 Uncharacterised protein family UPF0047 BJD94_RS14155 PF00342 Phosphoglucose isomerase BJD94_RS14165 PF01475 Ferric uptake regulator family BJD94_RS14170 PF01207 Dihydrouridine synthase (Dus) BJD94_RS14190 PF00667 FAD binding domain BJD94_RS14190 PF00258 Flavodoxin BJD94_RS14190 PF00175 Oxidoreductase NAD-binding domain BJD94_RS14195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJD94_RS14195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJD94_RS14200 PF01507 Phosphoadenosine phosphosulfate reductase family BJD94_RS14280 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS14280 PF00072 Response regulator receiver domain BJD94_RS14285 PF00999 Sodium/hydrogen exchanger family BJD94_RS14290 PF02607 B12 binding domain BJD94_RS14290 PF02965 Vitamin B12 dependent methionine synthase, activation domain BJD94_RS14290 PF00809 Pterin binding enzyme BJD94_RS14290 PF02310 B12 binding domain BJD94_RS14290 PF02574 Homocysteine S-methyltransferase BJD94_RS14295 PF01842 ACT domain BJD94_RS14295 PF00696 Amino acid kinase family BJD94_RS14305 PF00266 Aminotransferase class-V BJD94_RS14315 PF17760 UvrA interaction domain BJD94_RS14315 PF00005 ABC transporter BJD94_RS14315 PF17755 UvrA DNA-binding domain BJD94_RS14320 PF00483 Nucleotidyl transferase BJD94_RS14325 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS14330 PF00436 Single-strand binding protein family BJD94_RS14335 PF00563 EAL domain BJD94_RS14335 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS14335 PF17157 Gammaproteobacterial periplasmic sensor domain BJD94_RS14355 PF00263 Bacterial type II and III secretion system protein BJD94_RS14355 PF11741 AMIN domain BJD94_RS14355 PF03958 Bacterial type II/III secretion system short domain BJD94_RS14355 PF07660 Secretin and TonB N terminus short domain BJD94_RS14360 PF01471 Putative peptidoglycan binding domain BJD94_RS14360 PF13401 AAA domain BJD94_RS14370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD94_RS14370 PF00437 Type II/IV secretion system protein BJD94_RS14375 PF00482 Type II secretion system (T2SS), protein F BJD94_RS14385 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS14390 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS14425 PF04085 rod shape-determining protein MreC BJD94_RS14430 PF04093 rod shape-determining protein MreD BJD94_RS14435 PF02545 Maf-like protein BJD94_RS14440 PF00575 S1 RNA binding domain BJD94_RS14440 PF10150 Ribonuclease E/G family BJD94_RS14445 PF13502 AsmA-like C-terminal region BJD94_RS14445 PF13116 Protein of unknown function BJD94_RS14450 PF00795 Carbon-nitrogen hydrolase BJD94_RS14455 PF01523 Putative modulator of DNA gyrase BJD94_RS14460 PF13638 PIN domain BJD94_RS14460 PF02562 PhoH-like protein BJD94_RS14465 PF12137 RNA polymerase recycling family C-terminal BJD94_RS14465 PF00271 Helicase conserved C-terminal domain BJD94_RS14465 PF18339 RapA N-terminal Tudor like domain 1 BJD94_RS14465 PF18337 RapA N-terminal Tudor like domain BJD94_RS14465 PF00176 SNF2 family N-terminal domain BJD94_RS14470 PF00849 RNA pseudouridylate synthase BJD94_RS14475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD94_RS14475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD94_RS14480 PF01042 Endoribonuclease L-PSP BJD94_RS14485 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BJD94_RS14485 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BJD94_RS14490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJD94_RS14490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJD94_RS14495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJD94_RS14495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJD94_RS14505 PF06877 Regulator of ribonuclease activity B BJD94_RS14515 PF00583 Acetyltransferase (GNAT) family BJD94_RS14525 PF05987 Bacterial protein of unknown function (DUF898) BJD94_RS14535 PF08264 Anticodon-binding domain of tRNA BJD94_RS14535 PF10458 Valyl tRNA synthetase tRNA binding arm BJD94_RS14535 PF00133 tRNA synthetases class I (I, L, M and V) BJD94_RS14540 PF04364 DNA polymerase III chi subunit, HolC BJD94_RS14545 PF00883 Cytosol aminopeptidase family, catalytic domain BJD94_RS14545 PF02789 Cytosol aminopeptidase family, N-terminal domain BJD94_RS14550 PF03739 Lipopolysaccharide export system permease LptF/LptG BJD94_RS14555 PF03739 Lipopolysaccharide export system permease LptF/LptG BJD94_RS14570 PF01522 Polysaccharide deacetylase BJD94_RS14575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD94_RS14580 PF02378 Phosphotransferase system, EIIC BJD94_RS14585 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BJD94_RS14590 PF02056 Family 4 glycosyl hydrolase BJD94_RS14590 PF11975 Family 4 glycosyl hydrolase C-terminal domain BJD94_RS14595 PF04794 YdjC-like protein BJD94_RS14600 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS14705 PF00672 HAMP domain BJD94_RS14705 PF17200 Single Cache domain 2 BJD94_RS14725 PF01464 Transglycosylase SLT domain BJD94_RS14725 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BJD94_RS14730 PF04362 Bacterial Fe(2+) trafficking BJD94_RS14735 PF14815 NUDIX domain BJD94_RS14735 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD94_RS14735 PF00633 Helix-hairpin-helix motif BJD94_RS14740 PF02390 Putative methyltransferase BJD94_RS14745 PF04960 Glutaminase BJD94_RS14750 PF06969 HemN C-terminal domain BJD94_RS14750 PF04055 Radical SAM superfamily BJD94_RS14755 PF01725 Ham1 family BJD94_RS14765 PF02594 Uncharacterised ACR, YggU family COG1872 BJD94_RS14770 PF02325 YGGT family BJD94_RS14775 PF03807 NADP oxidoreductase coenzyme F420-dependent BJD94_RS14775 PF14748 Pyrroline-5-carboxylate reductase dimerisation BJD94_RS14780 PF01168 Alanine racemase, N-terminal domain BJD94_RS14785 PF00437 Type II/IV secretion system protein BJD94_RS14790 PF00437 Type II/IV secretion system protein BJD94_RS14795 PF03652 Holliday junction resolvase BJD94_RS14800 PF02622 Uncharacterized ACR, COG1678 BJD94_RS14805 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BJD94_RS14805 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BJD94_RS14810 PF04452 RNA methyltransferase BJD94_RS14820 PF04231 Endonuclease I BJD94_RS14825 PF17283 SprT-like zinc ribbon domain BJD94_RS14825 PF10263 SprT-like family BJD94_RS14835 PF02773 S-adenosylmethionine synthetase, C-terminal domain BJD94_RS14835 PF02772 S-adenosylmethionine synthetase, central domain BJD94_RS14835 PF00438 S-adenosylmethionine synthetase, N-terminal domain BJD94_RS14840 PF02780 Transketolase, C-terminal domain BJD94_RS14840 PF02779 Transketolase, pyrimidine binding domain BJD94_RS14840 PF00456 Transketolase, thiamine diphosphate binding domain BJD94_RS14850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD94_RS14850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJD94_RS14855 PF00162 Phosphoglycerate kinase BJD94_RS14860 PF01116 Fructose-bisphosphate aldolase class-II BJD94_RS14865 PF00924 Mechanosensitive ion channel BJD94_RS14865 PF05552 Conserved TM helix BJD94_RS14870 PF01810 LysE type translocator BJD94_RS14875 PF03466 LysR substrate binding domain BJD94_RS14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS14885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD94_RS14885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD94_RS14885 PF01842 ACT domain BJD94_RS14890 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BJD94_RS14895 PF01812 5-formyltetrahydrofolate cyclo-ligase family BJD94_RS14905 PF05164 Cell division protein ZapA BJD94_RS14910 PF03695 Uncharacterised protein family (UPF0149) BJD94_RS14915 PF01494 FAD binding domain BJD94_RS14920 PF01494 FAD binding domain BJD94_RS14935 PF01571 Aminomethyltransferase folate-binding domain BJD94_RS14940 PF03937 Flavinator of succinate dehydrogenase BJD94_RS14950 PF02910 Fumarate reductase flavoprotein C-term BJD94_RS14950 PF00890 FAD binding domain BJD94_RS14955 PF04542 Sigma-70 region 2 BJD94_RS14955 PF08281 Sigma-70, region 4 BJD94_RS14960 PF03872 Anti sigma-E protein RseA, N-terminal domain BJD94_RS14960 PF03873 Anti sigma-E protein RseA, C-terminal domain BJD94_RS14965 PF03888 MucB/RseB N-terminal domain BJD94_RS14965 PF17188 MucB/RseB C-terminal domain BJD94_RS14975 PF00679 Elongation factor G C-terminus BJD94_RS14975 PF06421 GTP-binding protein LepA C-terminus BJD94_RS14975 PF00009 Elongation factor Tu GTP binding domain BJD94_RS14975 PF03144 Elongation factor Tu domain 2 BJD94_RS14980 PF10502 Signal peptidase, peptidase S26 BJD94_RS14985 PF00035 Double-stranded RNA binding motif BJD94_RS14985 PF14622 Ribonuclease-III-like BJD94_RS14990 PF07650 KH domain BJD94_RS14990 PF01926 50S ribosome-binding GTPase BJD94_RS14995 PF11967 Recombination protein O N terminal BJD94_RS14995 PF02565 Recombination protein O C terminal BJD94_RS15000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BJD94_RS15005 PF01648 4'-phosphopantetheinyl transferase superfamily BJD94_RS15020 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS15020 PF00563 EAL domain BJD94_RS15020 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS15025 PF00672 HAMP domain BJD94_RS15025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD94_RS15025 PF01627 Hpt domain BJD94_RS15025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS15025 PF00072 Response regulator receiver domain BJD94_RS15025 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS15030 PF01938 TRAM domain BJD94_RS15030 PF05958 tRNA (Uracil-5-)-methyltransferase BJD94_RS15035 PF13291 ACT domain BJD94_RS15035 PF04607 Region found in RelA / SpoT proteins BJD94_RS15035 PF02824 TGS domain BJD94_RS15040 PF03819 MazG nucleotide pyrophosphohydrolase domain BJD94_RS15045 PF00117 Glutamine amidotransferase class-I BJD94_RS15045 PF06418 CTP synthase N-terminus BJD94_RS15050 PF03952 Enolase, N-terminal domain BJD94_RS15050 PF00113 Enolase, C-terminal TIM barrel domain BJD94_RS15055 PF04977 Septum formation initiator BJD94_RS15060 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BJD94_RS15065 PF02542 YgbB family BJD94_RS15070 PF01142 tRNA pseudouridine synthase D (TruD) BJD94_RS15075 PF01975 Survival protein SurE BJD94_RS15085 PF01476 LysM domain BJD94_RS15085 PF01551 Peptidase family M23 BJD94_RS15090 PF04539 Sigma-70 region 3 BJD94_RS15090 PF04545 Sigma-70, region 4 BJD94_RS15090 PF00140 Sigma-70 factor, region 1.2 BJD94_RS15090 PF04542 Sigma-70 region 2 BJD94_RS15095 PF01624 MutS domain I BJD94_RS15095 PF05190 MutS family domain IV BJD94_RS15095 PF05188 MutS domain II BJD94_RS15095 PF00488 MutS domain V BJD94_RS15095 PF05192 MutS domain III BJD94_RS15100 PF02464 Competence-damaged protein BJD94_RS15105 PF00154 recA bacterial DNA recombination protein BJD94_RS15110 PF02631 RecX family BJD94_RS15115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJD94_RS15115 PF01411 tRNA synthetases class II (A) BJD94_RS15115 PF02272 DHHA1 domain BJD94_RS15120 PF13840 ACT domain BJD94_RS15120 PF01842 ACT domain BJD94_RS15120 PF00696 Amino acid kinase family BJD94_RS15125 PF02599 Global regulator protein family BJD94_RS15170 PF04277 Oxaloacetate decarboxylase, gamma chain BJD94_RS15175 PF00682 HMGL-like BJD94_RS15175 PF00364 Biotin-requiring enzyme BJD94_RS15175 PF02436 Conserved carboxylase domain BJD94_RS15180 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BJD94_RS15185 PF08240 Alcohol dehydrogenase GroES-like domain BJD94_RS15185 PF00107 Zinc-binding dehydrogenase BJD94_RS15190 PF09335 SNARE associated Golgi protein BJD94_RS15195 PF00675 Insulinase (Peptidase family M16) BJD94_RS15195 PF05193 Peptidase M16 inactive domain BJD94_RS15200 PF04262 Glutamate-cysteine ligase BJD94_RS15210 PF02664 S-Ribosylhomocysteinase (LuxS) BJD94_RS15215 PF00571 CBS domain BJD94_RS15215 PF03471 Transporter associated domain BJD94_RS15215 PF01595 Cyclin M transmembrane N-terminal domain BJD94_RS15220 PF01578 Cytochrome C assembly protein BJD94_RS15225 PF02881 SRP54-type protein, helical bundle domain BJD94_RS15225 PF00448 SRP54-type protein, GTPase domain BJD94_RS15225 PF02978 Signal peptide binding domain BJD94_RS15230 PF00886 Ribosomal protein S16 BJD94_RS15235 PF01782 RimM N-terminal domain BJD94_RS15235 PF05239 PRC-barrel domain BJD94_RS15240 PF01746 tRNA (Guanine-1)-methyltransferase BJD94_RS15245 PF01245 Ribosomal protein L19 BJD94_RS15250 PF03884 DNA gyrase inhibitor YacG BJD94_RS15255 PF07072 Cell division protein BJD94_RS15260 PF01121 Dephospho-CoA kinase BJD94_RS15265 PF06750 Bacterial Peptidase A24 N-terminal domain BJD94_RS15265 PF01478 Type IV leader peptidase family BJD94_RS15270 PF00482 Type II secretion system (T2SS), protein F BJD94_RS15275 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD94_RS15275 PF00437 Type II/IV secretion system protein BJD94_RS15280 PF00114 Pilin (bacterial filament) BJD94_RS15280 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS15285 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BJD94_RS15285 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BJD94_RS15290 PF01510 N-acetylmuramoyl-L-alanine amidase BJD94_RS15295 PF00392 Bacterial regulatory proteins, gntR family BJD94_RS15295 PF07729 FCD domain BJD94_RS15300 PF00456 Transketolase, thiamine diphosphate binding domain BJD94_RS15300 PF17831 Pyruvate dehydrogenase E1 component middle domain BJD94_RS15305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD94_RS15305 PF00364 Biotin-requiring enzyme BJD94_RS15305 PF02817 e3 binding domain BJD94_RS15310 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS15310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD94_RS15315 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS15320 PF00156 Phosphoribosyl transferase domain BJD94_RS15325 PF00484 Carbonic anhydrase BJD94_RS15330 PF01740 STAS domain BJD94_RS15330 PF00916 Sulfate permease family BJD94_RS15335 PF00005 ABC transporter BJD94_RS15340 PF01061 ABC-2 type transporter BJD94_RS15345 PF02569 Pantoate-beta-alanine ligase BJD94_RS15350 PF02548 Ketopantoate hydroxymethyltransferase BJD94_RS15355 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BJD94_RS15360 PF01743 Poly A polymerase head domain BJD94_RS15360 PF12627 Probable RNA and SrmB- binding site of polymerase A BJD94_RS15360 PF12626 Polymerase A arginine-rich C-terminus BJD94_RS15365 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD94_RS15370 PF01258 Prokaryotic dksA/traR C4-type zinc finger BJD94_RS15375 PF03749 Sugar fermentation stimulation protein RE domain BJD94_RS15375 PF17746 SfsA N-terminal OB domain BJD94_RS15380 PF04408 Helicase associated domain (HA2) BJD94_RS15380 PF00271 Helicase conserved C-terminal domain BJD94_RS15380 PF08482 ATP-dependent helicase C-terminal BJD94_RS15380 PF00270 DEAD/DEAH box helicase BJD94_RS15385 PF14814 Bifunctional transglycosylase second domain BJD94_RS15385 PF00905 Penicillin binding protein transpeptidase domain BJD94_RS15385 PF00912 Transglycosylase BJD94_RS15390 PF01734 Patatin-like phospholipase BJD94_RS15395 PF11791 Aconitate B N-terminal domain BJD94_RS15395 PF00330 Aconitase family (aconitate hydratase) BJD94_RS15395 PF06434 Aconitate hydratase 2 N-terminus BJD94_RS15400 PF02595 Glycerate kinase family BJD94_RS15405 PF02447 GntP family permease BJD94_RS15410 PF13556 PucR C-terminal helix-turn-helix domain BJD94_RS15410 PF17853 GGDEF-like domain BJD94_RS15410 PF05651 Putative sugar diacid recognition BJD94_RS15415 PF06062 Uncharacterised protein family (UPF0231) BJD94_RS15420 PF00543 Nitrogen regulatory protein P-II BJD94_RS15425 PF00909 Ammonium Transporter Family BJD94_RS15430 PF13416 Bacterial extracellular solute-binding protein BJD94_RS15440 PF00005 ABC transporter BJD94_RS15440 PF08402 TOBE domain BJD94_RS15445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD94_RS15445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD94_RS15445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD94_RS15445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD94_RS15450 PF06165 Glycosyltransferase family 36 BJD94_RS15450 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BJD94_RS15455 PF02838 Glycosyl hydrolase family 20, domain 2 BJD94_RS15455 PF00728 Glycosyl hydrolase family 20, catalytic domain BJD94_RS15460 PF01869 BadF/BadG/BcrA/BcrD ATPase family BJD94_RS15470 PF00005 ABC transporter BJD94_RS15470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS15475 PF00005 ABC transporter BJD94_RS15475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS15480 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS15480 PF12911 N-terminal TM domain of oligopeptide transport permease C BJD94_RS15485 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS15490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS15495 PF00072 Response regulator receiver domain BJD94_RS15495 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS15495 PF09308 LuxQ, periplasmic BJD94_RS15500 PF08468 Methyltransferase small domain N-terminal BJD94_RS15500 PF05175 Methyltransferase small domain BJD94_RS15505 PF01594 AI-2E family transporter BJD94_RS15510 PF00202 Aminotransferase class-III BJD94_RS15515 PF01521 Iron-sulphur cluster biosynthesis BJD94_RS15520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS15525 PF00873 AcrB/AcrD/AcrF family BJD94_RS15530 PF01551 Peptidase family M23 BJD94_RS15530 PF04225 Opacity-associated protein A LysM-like domain BJD94_RS15535 PF00579 tRNA synthetases class I (W and Y) BJD94_RS15540 PF04304 Protein of unknown function (DUF454) BJD94_RS15545 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BJD94_RS15550 PF13006 Insertion element 4 transposase N-terminal BJD94_RS15550 PF01609 Transposase DDE domain BJD94_RS15555 PF13609 Gram-negative porin BJD94_RS15565 PF03449 Transcription elongation factor, N-terminal BJD94_RS15565 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD94_RS15570 PF01985 CRS1 / YhbY (CRM) domain BJD94_RS15575 PF01728 FtsJ-like methyltransferase BJD94_RS15580 PF06480 FtsH Extracellular BJD94_RS15580 PF01434 Peptidase family M41 BJD94_RS15580 PF00004 ATPase family associated with various cellular activities (AAA) BJD94_RS15580 PF17862 AAA+ lid domain BJD94_RS15585 PF00809 Pterin binding enzyme BJD94_RS15590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD94_RS15590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD94_RS15590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD94_RS15590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD94_RS15595 PF03840 Preprotein translocase SecG subunit BJD94_RS15610 PF02576 RimP N-terminal domain BJD94_RS15610 PF17384 RimP C-terminal SH3 domain BJD94_RS15615 PF08529 NusA N-terminal domain BJD94_RS15615 PF13184 NusA-like KH domain BJD94_RS15615 PF00575 S1 RNA binding domain BJD94_RS15620 PF00009 Elongation factor Tu GTP binding domain BJD94_RS15620 PF08364 Bacterial translation initiation factor IF-2 associated region BJD94_RS15620 PF04760 Translation initiation factor IF-2, N-terminal region BJD94_RS15620 PF11987 Translation-initiation factor 2 BJD94_RS15625 PF02033 Ribosome-binding factor A BJD94_RS15630 PF01509 TruB family pseudouridylate synthase (N terminal domain) BJD94_RS15630 PF09157 Pseudouridine synthase II TruB, C-terminal BJD94_RS15630 PF16198 tRNA pseudouridylate synthase B C-terminal domain BJD94_RS15635 PF00312 Ribosomal protein S15 BJD94_RS15660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BJD94_RS15660 PF01138 3' exoribonuclease family, domain 1 BJD94_RS15660 PF00575 S1 RNA binding domain BJD94_RS15660 PF03725 3' exoribonuclease family, domain 2 BJD94_RS15660 PF00013 KH domain BJD94_RS15665 PF07719 Tetratricopeptide repeat BJD94_RS15665 PF13181 Tetratricopeptide repeat BJD94_RS15675 PF01554 MatE BJD94_RS15680 PF01136 Peptidase family U32 BJD94_RS15685 PF01136 Peptidase family U32 BJD94_RS15690 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS15690 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS15690 PF00563 EAL domain BJD94_RS15695 PF02036 SCP-2 sterol transfer family BJD94_RS15700 PF13508 Acetyltransferase (GNAT) domain BJD94_RS15710 PF00583 Acetyltransferase (GNAT) family BJD94_RS15715 PF00563 EAL domain BJD94_RS15715 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS15715 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS15720 PF08448 PAS fold BJD94_RS15720 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS15725 PF03144 Elongation factor Tu domain 2 BJD94_RS15725 PF00009 Elongation factor Tu GTP binding domain BJD94_RS15725 PF16658 Class II release factor RF3, C-terminal domain BJD94_RS15730 PF01026 TatD related DNase BJD94_RS15735 PF01773 Na+ dependent nucleoside transporter N-terminus BJD94_RS15735 PF07662 Na+ dependent nucleoside transporter C-terminus BJD94_RS15735 PF07670 Nucleoside recognition BJD94_RS15740 PF01791 DeoC/LacD family aldolase BJD94_RS15745 PF02885 Glycosyl transferase family, helical bundle domain BJD94_RS15745 PF00591 Glycosyl transferase family, a/b domain BJD94_RS15745 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BJD94_RS15750 PF01676 Metalloenzyme superfamily BJD94_RS15755 PF01048 Phosphorylase superfamily BJD94_RS15765 PF18429 Domain of unknown function (DUF5609) BJD94_RS15775 PF18073 Rubredoxin metal binding domain BJD94_RS15780 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS15780 PF00563 EAL domain BJD94_RS15780 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS15795 PF00679 Elongation factor G C-terminus BJD94_RS15795 PF14492 Elongation Factor G, domain II BJD94_RS15795 PF03764 Elongation factor G, domain IV BJD94_RS15795 PF00009 Elongation factor Tu GTP binding domain BJD94_RS15795 PF03144 Elongation factor Tu domain 2 BJD94_RS15800 PF00501 AMP-binding enzyme BJD94_RS15805 PF12833 Helix-turn-helix domain BJD94_RS15805 PF02311 AraC-like ligand binding domain BJD94_RS15835 PF13629 Pilus formation protein N terminal region BJD94_RS15835 PF04972 BON domain BJD94_RS15835 PF00263 Bacterial type II and III secretion system protein BJD94_RS15865 PF00437 Type II/IV secretion system protein BJD94_RS15885 PF02417 Chromate transporter BJD94_RS15890 PF03466 LysR substrate binding domain BJD94_RS15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS15900 PF01204 Trehalase BJD94_RS15905 PF13520 Amino acid permease BJD94_RS15910 PF13520 Amino acid permease BJD94_RS15915 PF04074 YhcH/YjgK/YiaL BJD94_RS15920 PF02929 Beta galactosidase small chain BJD94_RS15920 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BJD94_RS15920 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD94_RS15920 PF16353 Domain of unknown function(DUF4981) BJD94_RS15920 PF00703 Glycosyl hydrolases family 2 BJD94_RS15930 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS15935 PF16363 GDP-mannose 4,6 dehydratase BJD94_RS15940 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BJD94_RS15940 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BJD94_RS15945 PF00288 GHMP kinases N terminal domain BJD94_RS15945 PF10509 Galactokinase galactose-binding signature BJD94_RS15945 PF08544 GHMP kinases C terminal BJD94_RS15950 PF01263 Aldose 1-epimerase BJD94_RS15955 PF17200 Single Cache domain 2 BJD94_RS15955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS15955 PF00672 HAMP domain BJD94_RS15960 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS15965 PF01588 Putative tRNA binding domain BJD94_RS15980 PF02080 TrkA-C domain BJD94_RS15980 PF18030 RimK PreATP-grasp domain BJD94_RS15980 PF08443 RimK-like ATP-grasp domain BJD94_RS15990 PF01544 CorA-like Mg2+ transporter protein BJD94_RS15995 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BJD94_RS15995 PF01266 FAD dependent oxidoreductase BJD94_RS16000 PF08220 DeoR-like helix-turn-helix domain BJD94_RS16000 PF00455 DeoR C terminal sensor domain BJD94_RS16005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BJD94_RS16005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BJD94_RS16010 PF00230 Major intrinsic protein BJD94_RS16015 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BJD94_RS16015 PF14602 Hexapeptide repeat of succinyl-transferase BJD94_RS16025 PF07130 YebG protein BJD94_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS16030 PF03466 LysR substrate binding domain BJD94_RS16040 PF11893 Domain of unknown function (DUF3413) BJD94_RS16040 PF00884 Sulfatase BJD94_RS16045 PF17946 RecC C-terminal domain BJD94_RS16050 PF12705 PD-(D/E)XK nuclease superfamily BJD94_RS16050 PF00580 UvrD/REP helicase N-terminal domain BJD94_RS16050 PF13361 UvrD-like helicase C-terminal domain BJD94_RS16055 PF13538 UvrD-like helicase C-terminal domain BJD94_RS16065 PF00583 Acetyltransferase (GNAT) family BJD94_RS16065 PF00696 Amino acid kinase family BJD94_RS16075 PF03562 MltA specific insert domain BJD94_RS16075 PF06725 3D domain BJD94_RS16080 PF00899 ThiF family BJD94_RS16085 PF02657 Fe-S metabolism associated domain BJD94_RS16095 PF00266 Aminotransferase class-V BJD94_RS16100 PF01965 DJ-1/PfpI family BJD94_RS16105 PF08546 Ketopantoate reductase PanE/ApbA C terminal BJD94_RS16105 PF02558 Ketopantoate reductase PanE/ApbA BJD94_RS16110 PF03502 Nucleoside-specific channel-forming protein, Tsx BJD94_RS16120 PF04545 Sigma-70, region 4 BJD94_RS16120 PF04542 Sigma-70 region 2 BJD94_RS16130 PF07690 Major Facilitator Superfamily BJD94_RS16135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJD94_RS16145 PF05175 Methyltransferase small domain BJD94_RS16150 PF01722 BolA-like protein BJD94_RS16160 PF03116 NQR2, RnfD, RnfE family BJD94_RS16165 PF04205 FMN-binding domain BJD94_RS16200 PF00491 Arginase family BJD94_RS16205 PF00271 Helicase conserved C-terminal domain BJD94_RS16205 PF00270 DEAD/DEAH box helicase BJD94_RS16215 PF07683 Cobalamin synthesis protein cobW C-terminal domain BJD94_RS16215 PF02492 CobW/HypB/UreG, nucleotide-binding domain BJD94_RS16225 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS16245 PF04324 BFD-like [2Fe-2S] binding domain BJD94_RS16245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJD94_RS16245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJD94_RS16245 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS16245 PF18267 Rubredoxin NAD+ reductase C-terminal domain BJD94_RS16250 PF00005 ABC transporter BJD94_RS16255 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS16270 PF03861 ANTAR domain BJD94_RS16270 PF08376 Nitrate and nitrite sensing BJD94_RS16275 PF01738 Dienelactone hydrolase family BJD94_RS16280 PF02885 Glycosyl transferase family, helical bundle domain BJD94_RS16280 PF00591 Glycosyl transferase family, a/b domain BJD94_RS16285 PF14824 Sirohaem biosynthesis protein central BJD94_RS16285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD94_RS16285 PF10414 Sirohaem synthase dimerisation region BJD94_RS16290 PF04324 BFD-like [2Fe-2S] binding domain BJD94_RS16290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJD94_RS16290 PF00384 Molybdopterin oxidoreductase BJD94_RS16290 PF01568 Molydopterin dinucleotide binding domain BJD94_RS16300 PF00128 Alpha amylase, catalytic domain BJD94_RS16305 PF00672 HAMP domain BJD94_RS16305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS16310 PF00672 HAMP domain BJD94_RS16310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS16320 PF07968 Leukocidin/Hemolysin toxin family BJD94_RS16320 PF00652 Ricin-type beta-trefoil lectin domain BJD94_RS16325 PF07690 Major Facilitator Superfamily BJD94_RS16330 PF03009 Glycerophosphoryl diester phosphodiesterase family BJD94_RS16335 PF01523 Putative modulator of DNA gyrase BJD94_RS16340 PF01523 Putative modulator of DNA gyrase BJD94_RS16345 PF07963 Prokaryotic N-terminal methylation motif BJD94_RS16345 PF08334 Type II secretion system (T2SS), protein G BJD94_RS16350 PF03606 C4-dicarboxylate anaerobic carrier BJD94_RS16355 PF04011 LemA family BJD94_RS16360 PF01435 Peptidase family M48 BJD94_RS16375 PF04634 Protein of unknown function, DUF600 BJD94_RS16380 PF03527 RHS protein BJD94_RS16390 PF03527 RHS protein BJD94_RS16390 PF05593 RHS Repeat BJD94_RS16405 PF06715 Gp5 C-terminal repeat (3 copies) BJD94_RS16405 PF04717 Type VI secretion system, phage-baseplate injector BJD94_RS16415 PF10431 C-terminal, D2-small domain, of ClpB protein BJD94_RS16415 PF07724 AAA domain (Cdc48 subfamily) BJD94_RS16415 PF17871 AAA lid domain BJD94_RS16415 PF00004 ATPase family associated with various cellular activities (AAA) BJD94_RS16425 PF05947 Type VI secretion system, TssF BJD94_RS16435 PF07024 ImpE protein BJD94_RS16440 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD94_RS16445 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD94_RS16450 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD94_RS16470 PF06744 Type VI secretion protein IcmF C-terminal BJD94_RS16470 PF14331 ImcF-related N-terminal domain BJD94_RS16470 PF06761 Intracellular multiplication and human macrophage-killing BJD94_RS16475 PF13677 Membrane MotB of proton-channel complex MotA/MotB BJD94_RS16475 PF00691 OmpA family BJD94_RS16480 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BJD94_RS16495 PF03793 PASTA domain BJD94_RS16495 PF00069 Protein kinase domain BJD94_RS16515 PF12843 Putative quorum-sensing-regulated virulence factor BJD94_RS16530 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS16530 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS16530 PF00563 EAL domain BJD94_RS16535 PF01329 Pterin 4 alpha carbinolamine dehydratase BJD94_RS16540 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BJD94_RS16545 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS16545 PF00501 AMP-binding enzyme BJD94_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS16555 PF03466 LysR substrate binding domain BJD94_RS16565 PF00892 EamA-like transporter family BJD94_RS16580 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS16580 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS16585 PF11849 Domain of unknown function (DUF3369) BJD94_RS16595 PF00962 Adenosine/AMP deaminase BJD94_RS16610 PF00676 Dehydrogenase E1 component BJD94_RS16615 PF02780 Transketolase, C-terminal domain BJD94_RS16615 PF02779 Transketolase, pyrimidine binding domain BJD94_RS16620 PF00364 Biotin-requiring enzyme BJD94_RS16620 PF02817 e3 binding domain BJD94_RS16620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD94_RS16625 PF00766 Electron transfer flavoprotein FAD-binding domain BJD94_RS16625 PF01012 Electron transfer flavoprotein domain BJD94_RS16630 PF01012 Electron transfer flavoprotein domain BJD94_RS16640 PF00672 HAMP domain BJD94_RS16640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS16645 PF00842 Alanine racemase, C-terminal domain BJD94_RS16645 PF01168 Alanine racemase, N-terminal domain BJD94_RS16650 PF11647 Membrane Localization Domain BJD94_RS16650 PF16671 Actin cross-linking domain BJD94_RS16650 PF11713 Peptidase C80 family BJD94_RS16650 PF07634 RtxA repeat BJD94_RS16650 PF12146 Serine aminopeptidase, S33 BJD94_RS16655 PF02794 RTX toxin acyltransferase family BJD94_RS16665 PF00664 ABC transporter transmembrane region BJD94_RS16665 PF03412 Peptidase C39 family BJD94_RS16665 PF00005 ABC transporter BJD94_RS16675 PF03412 Peptidase C39 family BJD94_RS16675 PF00005 ABC transporter BJD94_RS16675 PF00664 ABC transporter transmembrane region BJD94_RS16690 PF09722 Protein of unknown function (DUF2384) BJD94_RS16705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD94_RS16705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJD94_RS16710 PF00378 Enoyl-CoA hydratase/isomerase BJD94_RS16715 PF00378 Enoyl-CoA hydratase/isomerase BJD94_RS16720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD94_RS16720 PF02770 Acyl-CoA dehydrogenase, middle domain BJD94_RS16720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD94_RS16725 PF00171 Aldehyde dehydrogenase family BJD94_RS16730 PF02803 Thiolase, C-terminal domain BJD94_RS16730 PF00108 Thiolase, N-terminal domain BJD94_RS16735 PF09278 MerR, DNA binding BJD94_RS16735 PF00376 MerR family regulatory protein BJD94_RS16740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD94_RS16740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD94_RS16740 PF02770 Acyl-CoA dehydrogenase, middle domain BJD94_RS16745 PF01039 Carboxyl transferase domain BJD94_RS16750 PF00378 Enoyl-CoA hydratase/isomerase BJD94_RS16755 PF00682 HMGL-like BJD94_RS16760 PF10417 C-terminal domain of 1-Cys peroxiredoxin BJD94_RS16760 PF00578 AhpC/TSA family BJD94_RS16765 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS16765 PF13192 Thioredoxin domain BJD94_RS16770 PF00313 'Cold-shock' DNA-binding domain BJD94_RS16780 PF01699 Sodium/calcium exchanger protein BJD94_RS16785 PF16925 Tetracyclin repressor-like, C-terminal domain BJD94_RS16785 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS16790 PF16884 N-terminal domain of oxidoreductase BJD94_RS16790 PF00107 Zinc-binding dehydrogenase BJD94_RS16805 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS16815 PF07690 Major Facilitator Superfamily BJD94_RS16820 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS16820 PF00072 Response regulator receiver domain BJD94_RS16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS16825 PF07730 Histidine kinase BJD94_RS16825 PF05231 MASE1 BJD94_RS16830 PF07690 Major Facilitator Superfamily BJD94_RS16835 PF01238 Phosphomannose isomerase type I BJD94_RS16845 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS16855 PF03889 Alternative ribosome-rescue factor A BJD94_RS16860 PF00313 'Cold-shock' DNA-binding domain BJD94_RS16890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJD94_RS16890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD94_RS16895 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS16900 PF00672 HAMP domain BJD94_RS16900 PF12729 Four helix bundle sensory module for signal transduction BJD94_RS16900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS16905 PF00873 AcrB/AcrD/AcrF family BJD94_RS16910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS16915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BJD94_RS16920 PF01546 Peptidase family M20/M25/M40 BJD94_RS16920 PF07687 Peptidase dimerisation domain BJD94_RS16930 PF00248 Aldo/keto reductase family BJD94_RS16950 PF00654 Voltage gated chloride channel BJD94_RS16960 PF01566 Natural resistance-associated macrophage protein BJD94_RS16965 PF01227 GTP cyclohydrolase I BJD94_RS16970 PF00994 Probable molybdopterin binding domain BJD94_RS16970 PF03453 MoeA N-terminal region (domain I and II) BJD94_RS16970 PF03454 MoeA C-terminal region (domain IV) BJD94_RS16975 PF00899 ThiF family BJD94_RS16985 PF00581 Rhodanese-like domain BJD94_RS16990 PF00563 EAL domain BJD94_RS16990 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS16990 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS16995 PF08329 Chitinase A, N-terminal domain BJD94_RS16995 PF00704 Glycosyl hydrolases family 18 BJD94_RS17005 PF00923 Transaldolase/Fructose-6-phosphate aldolase BJD94_RS17010 PF02780 Transketolase, C-terminal domain BJD94_RS17010 PF02779 Transketolase, pyrimidine binding domain BJD94_RS17010 PF00456 Transketolase, thiamine diphosphate binding domain BJD94_RS17020 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS17020 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS17020 PF00563 EAL domain BJD94_RS17025 PF08447 PAS fold BJD94_RS17025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS17030 PF00793 DAHP synthetase I family BJD94_RS17035 PF01389 OmpA-like transmembrane domain BJD94_RS17035 PF00691 OmpA family BJD94_RS17040 PF01040 UbiA prenyltransferase family BJD94_RS17045 PF02628 Cytochrome oxidase assembly protein BJD94_RS17065 PF00510 Cytochrome c oxidase subunit III BJD94_RS17070 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BJD94_RS17075 PF00115 Cytochrome C and Quinol oxidase polypeptide I BJD94_RS17080 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BJD94_RS17080 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BJD94_RS17085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD94_RS17085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD94_RS17085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD94_RS17085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD94_RS17095 PF01810 LysE type translocator BJD94_RS17115 PF01557 Fumarylacetoacetate (FAA) hydrolase family BJD94_RS17120 PF01047 MarR family BJD94_RS17125 PF02566 OsmC-like protein BJD94_RS17135 PF00578 AhpC/TSA family BJD94_RS17145 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS17145 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS17145 PF00563 EAL domain BJD94_RS17150 PF00892 EamA-like transporter family BJD94_RS17155 PF00462 Glutaredoxin BJD94_RS17165 PF07690 Major Facilitator Superfamily BJD94_RS17170 PF03466 LysR substrate binding domain BJD94_RS17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS17175 PF00360 Phytochrome region BJD94_RS17175 PF01590 GAF domain BJD94_RS17175 PF00563 EAL domain BJD94_RS17175 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS17180 PF01042 Endoribonuclease L-PSP BJD94_RS17190 PF02838 Glycosyl hydrolase family 20, domain 2 BJD94_RS17190 PF00728 Glycosyl hydrolase family 20, catalytic domain BJD94_RS17195 PF00474 Sodium:solute symporter family BJD94_RS17205 PF07969 Amidohydrolase family BJD94_RS17215 PF01418 Helix-turn-helix domain, rpiR family BJD94_RS17215 PF01380 SIS domain BJD94_RS17215 PF02685 Glucokinase BJD94_RS17225 PF00005 ABC transporter BJD94_RS17235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD94_RS17245 PF12706 Beta-lactamase superfamily domain BJD94_RS17260 PF01047 MarR family BJD94_RS17275 PF00271 Helicase conserved C-terminal domain BJD94_RS17275 PF00270 DEAD/DEAH box helicase BJD94_RS17285 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS17300 PF03372 Endonuclease/Exonuclease/phosphatase family BJD94_RS17310 PF00579 tRNA synthetases class I (W and Y) BJD94_RS17315 PF00583 Acetyltransferase (GNAT) family BJD94_RS17320 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD94_RS17320 PF14760 Rnk N-terminus BJD94_RS17350 PF00478 IMP dehydrogenase / GMP reductase domain BJD94_RS17360 PF01256 Carbohydrate kinase BJD94_RS17360 PF03853 YjeF-related protein N-terminus BJD94_RS17380 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS17380 PF00072 Response regulator receiver domain BJD94_RS17385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BJD94_RS17385 PF07730 Histidine kinase BJD94_RS17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS17385 PF00672 HAMP domain BJD94_RS17390 PF12838 4Fe-4S dicluster domain BJD94_RS17390 PF13187 4Fe-4S dicluster domain BJD94_RS17400 PF00384 Molybdopterin oxidoreductase BJD94_RS17400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJD94_RS17400 PF01568 Molydopterin dinucleotide binding domain BJD94_RS17405 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BJD94_RS17410 PF03264 NapC/NirT cytochrome c family, N-terminal region BJD94_RS17425 PF00561 alpha/beta hydrolase fold BJD94_RS17425 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BJD94_RS17435 PF00108 Thiolase, N-terminal domain BJD94_RS17435 PF02803 Thiolase, C-terminal domain BJD94_RS17440 PF00106 short chain dehydrogenase BJD94_RS17445 PF02355 Protein export membrane protein BJD94_RS17445 PF07549 SecD/SecF GG Motif BJD94_RS17450 PF13721 SecD export protein N-terminal TM region BJD94_RS17450 PF02355 Protein export membrane protein BJD94_RS17450 PF07549 SecD/SecF GG Motif BJD94_RS17480 PF01037 Lrp/AsnC ligand binding domain BJD94_RS17495 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS17495 PF09308 LuxQ, periplasmic BJD94_RS17495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS17495 PF00072 Response regulator receiver domain BJD94_RS17500 PF13407 Periplasmic binding protein domain BJD94_RS17510 PF01541 GIY-YIG catalytic domain BJD94_RS17515 PF04337 Protein of unknown function, DUF480 BJD94_RS17525 PF04363 Protein of unknown function (DUF496) BJD94_RS17530 PF13006 Insertion element 4 transposase N-terminal BJD94_RS17530 PF01609 Transposase DDE domain BJD94_RS17535 PF01238 Phosphomannose isomerase type I BJD94_RS17550 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS17550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD94_RS17560 PF05378 Hydantoinase/oxoprolinase N-terminal region BJD94_RS17560 PF01968 Hydantoinase/oxoprolinase BJD94_RS17570 PF01074 Glycosyl hydrolases family 38 N-terminal domain BJD94_RS17570 PF07748 Glycosyl hydrolases family 38 C-terminal domain BJD94_RS17570 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 BJD94_RS17570 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain BJD94_RS17570 PF09261 Alpha mannosidase middle domain BJD94_RS17575 PF00480 ROK family BJD94_RS17580 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BJD94_RS17590 PF00480 ROK family BJD94_RS17605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJD94_RS17605 PF01411 tRNA synthetases class II (A) BJD94_RS17605 PF02272 DHHA1 domain BJD94_RS17615 PF01554 MatE BJD94_RS17620 PF00072 Response regulator receiver domain BJD94_RS17620 PF00672 HAMP domain BJD94_RS17620 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS17620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD94_RS17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS17620 PF01627 Hpt domain BJD94_RS17635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD94_RS17635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJD94_RS17645 PF03466 LysR substrate binding domain BJD94_RS17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS17650 PF00709 Adenylosuccinate synthetase BJD94_RS17655 PF00462 Glutaredoxin BJD94_RS17655 PF08534 Redoxin BJD94_RS17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS17665 PF03466 LysR substrate binding domain BJD94_RS17670 PF01037 Lrp/AsnC ligand binding domain BJD94_RS17675 PF13520 Amino acid permease BJD94_RS17680 PF13230 Glutamine amidotransferases class-II BJD94_RS17685 PF00155 Aminotransferase class I and II BJD94_RS17685 PF00392 Bacterial regulatory proteins, gntR family BJD94_RS17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS17695 PF00672 HAMP domain BJD94_RS17695 PF16527 Two-component sensor protein CpxA, periplasmic domain BJD94_RS17695 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS17700 PF00072 Response regulator receiver domain BJD94_RS17700 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS17710 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BJD94_RS17710 PF12833 Helix-turn-helix domain BJD94_RS17725 PF03448 MgtE intracellular N domain BJD94_RS17725 PF01769 Divalent cation transporter BJD94_RS17725 PF00571 CBS domain BJD94_RS17730 PF12833 Helix-turn-helix domain BJD94_RS17735 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BJD94_RS17740 PF07969 Amidohydrolase family BJD94_RS17745 PF13654 AAA domain BJD94_RS17745 PF05362 Lon protease (S16) C-terminal proteolytic domain BJD94_RS17755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS17755 PF00005 ABC transporter BJD94_RS17760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BJD94_RS17760 PF00326 Prolyl oligopeptidase family BJD94_RS17765 PF03466 LysR substrate binding domain BJD94_RS17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS17770 PF02652 L-lactate permease BJD94_RS17775 PF02754 Cysteine-rich domain BJD94_RS17780 PF11870 Domain of unknown function (DUF3390) BJD94_RS17780 PF13183 4Fe-4S dicluster domain BJD94_RS17780 PF02589 LUD domain BJD94_RS17785 PF02589 LUD domain BJD94_RS17810 PF07690 Major Facilitator Superfamily BJD94_RS17855 PF02378 Phosphotransferase system, EIIC BJD94_RS17870 PF17185 NlpE C-terminal OB domain BJD94_RS17870 PF04170 NlpE N-terminal domain BJD94_RS17875 PF00005 ABC transporter BJD94_RS17880 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS17885 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS17905 PF08448 PAS fold BJD94_RS17905 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS17905 PF00563 EAL domain BJD94_RS17910 PF13472 GDSL-like Lipase/Acylhydrolase family BJD94_RS17910 PF17996 Carbohydrate esterase 2 N-terminal BJD94_RS17920 PF12729 Four helix bundle sensory module for signal transduction BJD94_RS17920 PF00672 HAMP domain BJD94_RS17920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS17925 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD94_RS17940 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BJD94_RS17940 PF01648 4'-phosphopantetheinyl transferase superfamily BJD94_RS17945 PF00668 Condensation domain BJD94_RS17945 PF00501 AMP-binding enzyme BJD94_RS17945 PF07993 Male sterility protein BJD94_RS17945 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS17945 PF00550 Phosphopantetheine attachment site BJD94_RS17950 PF00501 AMP-binding enzyme BJD94_RS17950 PF00975 Thioesterase domain BJD94_RS17950 PF00550 Phosphopantetheine attachment site BJD94_RS17950 PF00668 Condensation domain BJD94_RS17950 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS17955 PF00793 DAHP synthetase I family BJD94_RS17965 PF00425 chorismate binding enzyme BJD94_RS17970 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS17970 PF00501 AMP-binding enzyme BJD94_RS17975 PF08021 Siderophore-interacting FAD-binding domain BJD94_RS17975 PF04954 Siderophore-interacting protein BJD94_RS17980 PF00857 Isochorismatase family BJD94_RS17980 PF00550 Phosphopantetheine attachment site BJD94_RS17990 PF00501 AMP-binding enzyme BJD94_RS17990 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS18000 PF01497 Periplasmic binding protein BJD94_RS18005 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS18010 PF00668 Condensation domain BJD94_RS18010 PF00975 Thioesterase domain BJD94_RS18010 PF00550 Phosphopantetheine attachment site BJD94_RS18010 PF13193 AMP-binding enzyme C-terminal domain BJD94_RS18010 PF00501 AMP-binding enzyme BJD94_RS18015 PF18030 RimK PreATP-grasp domain BJD94_RS18015 PF08443 RimK-like ATP-grasp domain BJD94_RS18020 PF08443 RimK-like ATP-grasp domain BJD94_RS18020 PF18030 RimK PreATP-grasp domain BJD94_RS18025 PF00753 Metallo-beta-lactamase superfamily BJD94_RS18040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS18045 PF00873 AcrB/AcrD/AcrF family BJD94_RS18060 PF01212 Beta-eliminating lyase BJD94_RS18065 PF03222 Tryptophan/tyrosine permease family BJD94_RS18070 PF00005 ABC transporter BJD94_RS18070 PF12848 ABC transporter BJD94_RS18070 PF16326 ABC transporter C-terminal domain BJD94_RS18080 PF00175 Oxidoreductase NAD-binding domain BJD94_RS18080 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD94_RS18080 PF00970 Oxidoreductase FAD-binding domain BJD94_RS18085 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS18090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD94_RS18100 PF03611 PTS system sugar-specific permease component BJD94_RS18105 PF01327 Polypeptide deformylase BJD94_RS18110 PF12561 ToxR activated gene A lipoprotein domain BJD94_RS18110 PF00041 Fibronectin type III domain BJD94_RS18115 PF01595 Cyclin M transmembrane N-terminal domain BJD94_RS18115 PF00571 CBS domain BJD94_RS18115 PF03471 Transporter associated domain BJD94_RS18120 PF00171 Aldehyde dehydrogenase family BJD94_RS18125 PF01590 GAF domain BJD94_RS18125 PF00158 Sigma-54 interaction domain BJD94_RS18125 PF02954 Bacterial regulatory protein, Fis family BJD94_RS18130 PF00563 EAL domain BJD94_RS18130 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS18130 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS18135 PF13407 Periplasmic binding protein domain BJD94_RS18140 PF02798 Glutathione S-transferase, N-terminal domain BJD94_RS18140 PF14497 Glutathione S-transferase, C-terminal domain BJD94_RS18145 PF03466 LysR substrate binding domain BJD94_RS18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS18150 PF02567 Phenazine biosynthesis-like protein BJD94_RS18155 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS18155 PF00072 Response regulator receiver domain BJD94_RS18160 PF01479 S4 domain BJD94_RS18160 PF00579 tRNA synthetases class I (W and Y) BJD94_RS18165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD94_RS18165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BJD94_RS18180 PF13533 Biotin-lipoyl like BJD94_RS18190 PF14864 Alkyl sulfatase C-terminal BJD94_RS18190 PF14863 Alkyl sulfatase dimerisation BJD94_RS18190 PF00753 Metallo-beta-lactamase superfamily BJD94_RS18200 PF03466 LysR substrate binding domain BJD94_RS18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS18205 PF00884 Sulfatase BJD94_RS18205 PF08019 Phosphoethanolamine transferase EptA/EptB BJD94_RS18215 PF01758 Sodium Bile acid symporter family BJD94_RS18220 PF01022 Bacterial regulatory protein, arsR family BJD94_RS18235 PF01546 Peptidase family M20/M25/M40 BJD94_RS18235 PF07687 Peptidase dimerisation domain BJD94_RS18240 PF07670 Nucleoside recognition BJD94_RS18245 PF07670 Nucleoside recognition BJD94_RS18255 PF00128 Alpha amylase, catalytic domain BJD94_RS18260 PF01081 KDPG and KHG aldolase BJD94_RS18265 PF00294 pfkB family carbohydrate kinase BJD94_RS18270 PF00892 EamA-like transporter family BJD94_RS18280 PF03466 LysR substrate binding domain BJD94_RS18280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS18295 PF08543 Phosphomethylpyrimidine kinase BJD94_RS18300 PF00155 Aminotransferase class I and II BJD94_RS18305 PF02080 TrkA-C domain BJD94_RS18305 PF06826 Predicted Permease Membrane Region BJD94_RS18315 PF13533 Biotin-lipoyl like BJD94_RS18330 PF00135 Carboxylesterase family BJD94_RS18335 PF13091 PLD-like domain BJD94_RS18340 PF01103 Surface antigen BJD94_RS18340 PF17243 POTRA domain TamA domain 1 BJD94_RS18350 PF07883 Cupin domain BJD94_RS18355 PF10688 Bacterial inner membrane protein BJD94_RS18365 PF09339 IclR helix-turn-helix domain BJD94_RS18365 PF01614 Bacterial transcriptional regulator BJD94_RS18400 PF00924 Mechanosensitive ion channel BJD94_RS18410 PF00873 AcrB/AcrD/AcrF family BJD94_RS18415 PF13533 Biotin-lipoyl like BJD94_RS18435 PF00072 Response regulator receiver domain BJD94_RS18435 PF01627 Hpt domain BJD94_RS18435 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS18435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS18435 PF00672 HAMP domain BJD94_RS18435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD94_RS18440 PF00293 NUDIX domain BJD94_RS18445 PF01161 Phosphatidylethanolamine-binding protein BJD94_RS18450 PF12833 Helix-turn-helix domain BJD94_RS18455 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BJD94_RS18460 PF00376 MerR family regulatory protein BJD94_RS18460 PF09278 MerR, DNA binding BJD94_RS18470 PF02378 Phosphotransferase system, EIIC BJD94_RS18470 PF00367 phosphotransferase system, EIIB BJD94_RS18480 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS18480 PF17151 Periplasmic sensor domain BJD94_RS18485 PF00583 Acetyltransferase (GNAT) family BJD94_RS18495 PF03144 Elongation factor Tu domain 2 BJD94_RS18495 PF00679 Elongation factor G C-terminus BJD94_RS18495 PF14492 Elongation Factor G, domain II BJD94_RS18495 PF03764 Elongation factor G, domain IV BJD94_RS18495 PF00009 Elongation factor Tu GTP binding domain BJD94_RS18510 PF02001 Protein of unknown function DUF134 BJD94_RS18520 PF03150 Di-haem cytochrome c peroxidase BJD94_RS18520 PF00034 Cytochrome c BJD94_RS18525 PF06942 GlpM protein BJD94_RS18535 PF12833 Helix-turn-helix domain BJD94_RS18540 PF07690 Major Facilitator Superfamily BJD94_RS18560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BJD94_RS18565 PF00892 EamA-like transporter family BJD94_RS18570 PF00175 Oxidoreductase NAD-binding domain BJD94_RS18570 PF00970 Oxidoreductase FAD-binding domain BJD94_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS18580 PF03466 LysR substrate binding domain BJD94_RS18590 PF00881 Nitroreductase family BJD94_RS18595 PF00561 alpha/beta hydrolase fold BJD94_RS18605 PF00270 DEAD/DEAH box helicase BJD94_RS18605 PF00271 Helicase conserved C-terminal domain BJD94_RS18635 PF04151 Bacterial pre-peptidase C-terminal domain BJD94_RS18635 PF02868 Thermolysin metallopeptidase, alpha-helical domain BJD94_RS18635 PF01447 Thermolysin metallopeptidase, catalytic domain BJD94_RS18635 PF03413 Peptidase propeptide and YPEB domain BJD94_RS18635 PF07504 Fungalysin/Thermolysin Propeptide Motif BJD94_RS18640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD94_RS18640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD94_RS18650 PF13599 Pentapeptide repeats (9 copies) BJD94_RS18660 PF00672 HAMP domain BJD94_RS18660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS18665 PF00672 HAMP domain BJD94_RS18665 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS18665 PF01627 Hpt domain BJD94_RS18665 PF00072 Response regulator receiver domain BJD94_RS18665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD94_RS18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS18670 PF00072 Response regulator receiver domain BJD94_RS18680 PF01266 FAD dependent oxidoreductase BJD94_RS18700 PF02954 Bacterial regulatory protein, Fis family BJD94_RS18700 PF00072 Response regulator receiver domain BJD94_RS18700 PF00158 Sigma-54 interaction domain BJD94_RS18705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS18705 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS18705 PF02743 Cache domain BJD94_RS18715 PF00753 Metallo-beta-lactamase superfamily BJD94_RS18715 PF14863 Alkyl sulfatase dimerisation BJD94_RS18715 PF14864 Alkyl sulfatase C-terminal BJD94_RS18725 PF00072 Response regulator receiver domain BJD94_RS18725 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS18730 PF00672 HAMP domain BJD94_RS18730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS18730 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS18735 PF03466 LysR substrate binding domain BJD94_RS18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS18740 PF00529 HlyD membrane-fusion protein of T1SS BJD94_RS18740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS18750 PF08267 Cobalamin-independent synthase, N-terminal domain BJD94_RS18750 PF01717 Cobalamin-independent synthase, Catalytic domain BJD94_RS18760 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS18780 PF14579 Helix-hairpin-helix motif BJD94_RS18780 PF02811 PHP domain BJD94_RS18780 PF00929 Exonuclease BJD94_RS18780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJD94_RS18780 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJD94_RS18780 PF11490 DNA polymerase III polC-type N-terminus II BJD94_RS18785 PF12704 MacB-like periplasmic core domain BJD94_RS18785 PF02687 FtsX-like permease family BJD94_RS18785 PF00005 ABC transporter BJD94_RS18790 PF00005 ABC transporter BJD94_RS18790 PF02687 FtsX-like permease family BJD94_RS18790 PF12704 MacB-like periplasmic core domain BJD94_RS18795 PF12704 MacB-like periplasmic core domain BJD94_RS18795 PF00005 ABC transporter BJD94_RS18795 PF02687 FtsX-like permease family BJD94_RS18820 PF00005 ABC transporter BJD94_RS18825 PF01497 Periplasmic binding protein BJD94_RS18830 PF01032 FecCD transport family BJD94_RS18840 PF00593 TonB dependent receptor BJD94_RS18840 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS18845 PF01116 Fructose-bisphosphate aldolase class-II BJD94_RS18850 PF01979 Amidohydrolase family BJD94_RS18855 PF03610 PTS system fructose IIA component BJD94_RS18860 PF03613 PTS system mannose/fructose/sorbose family IID component BJD94_RS18865 PF03609 PTS system sorbose-specific iic component BJD94_RS18870 PF03830 PTS system sorbose subfamily IIB component BJD94_RS18875 PF01380 SIS domain BJD94_RS18880 PF08013 Tagatose 6 phosphate kinase BJD94_RS18885 PF08220 DeoR-like helix-turn-helix domain BJD94_RS18885 PF00455 DeoR C terminal sensor domain BJD94_RS18895 PF08220 DeoR-like helix-turn-helix domain BJD94_RS18895 PF00455 DeoR C terminal sensor domain BJD94_RS18905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BJD94_RS18905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJD94_RS18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS18910 PF03466 LysR substrate binding domain BJD94_RS18915 PF00753 Metallo-beta-lactamase superfamily BJD94_RS18915 PF14863 Alkyl sulfatase dimerisation BJD94_RS18915 PF14864 Alkyl sulfatase C-terminal BJD94_RS18965 PF01641 SelR domain BJD94_RS18970 PF01625 Peptide methionine sulfoxide reductase BJD94_RS18990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS18990 PF00672 HAMP domain BJD94_RS19005 PF00462 Glutaredoxin BJD94_RS19010 PF12833 Helix-turn-helix domain BJD94_RS19010 PF12852 Cupin BJD94_RS19035 PF03473 MOSC domain BJD94_RS19035 PF03475 3-alpha domain BJD94_RS19050 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS19055 PF03553 Na+/H+ antiporter family BJD94_RS19060 PF00155 Aminotransferase class I and II BJD94_RS19065 PF00270 DEAD/DEAH box helicase BJD94_RS19065 PF00271 Helicase conserved C-terminal domain BJD94_RS19075 PF00005 ABC transporter BJD94_RS19075 PF00664 ABC transporter transmembrane region BJD94_RS19085 PF01037 Lrp/AsnC ligand binding domain BJD94_RS19095 PF00474 Sodium:solute symporter family BJD94_RS19105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BJD94_RS19105 PF14850 DNA-binding domain of Proline dehydrogenase BJD94_RS19105 PF01619 Proline dehydrogenase BJD94_RS19105 PF00171 Aldehyde dehydrogenase family BJD94_RS19110 PF12833 Helix-turn-helix domain BJD94_RS19125 PF01243 Pyridoxamine 5'-phosphate oxidase BJD94_RS19125 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BJD94_RS19130 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS19130 PF02743 Cache domain BJD94_RS19135 PF00158 Sigma-54 interaction domain BJD94_RS19135 PF00072 Response regulator receiver domain BJD94_RS19135 PF02954 Bacterial regulatory protein, Fis family BJD94_RS19140 PF00529 HlyD membrane-fusion protein of T1SS BJD94_RS19155 PF03412 Peptidase C39 family BJD94_RS19155 PF00664 ABC transporter transmembrane region BJD94_RS19155 PF00005 ABC transporter BJD94_RS19165 PF03606 C4-dicarboxylate anaerobic carrier BJD94_RS19170 PF01979 Amidohydrolase family BJD94_RS19185 PF00118 TCP-1/cpn60 chaperonin family BJD94_RS19190 PF00166 Chaperonin 10 Kd subunit BJD94_RS19205 PF01029 NusB family BJD94_RS19205 PF01189 16S rRNA methyltransferase RsmB/F BJD94_RS19210 PF01380 SIS domain BJD94_RS19210 PF01418 Helix-turn-helix domain, rpiR family BJD94_RS19215 PF13580 SIS domain BJD94_RS19220 PF00367 phosphotransferase system, EIIB BJD94_RS19220 PF02378 Phosphotransferase system, EIIC BJD94_RS19230 PF00300 Histidine phosphatase superfamily (branch 1) BJD94_RS19235 PF04151 Bacterial pre-peptidase C-terminal domain BJD94_RS19235 PF08453 Peptidase family M9 N-terminal BJD94_RS19235 PF01752 Collagenase BJD94_RS19275 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS19275 PF00072 Response regulator receiver domain BJD94_RS19285 PF02203 Tar ligand binding domain homologue BJD94_RS19285 PF00672 HAMP domain BJD94_RS19285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS19290 PF00072 Response regulator receiver domain BJD94_RS19290 PF01339 CheB methylesterase BJD94_RS19295 PF03975 CheD chemotactic sensory transduction BJD94_RS19300 PF01739 CheR methyltransferase, SAM binding domain BJD94_RS19300 PF03705 CheR methyltransferase, all-alpha domain BJD94_RS19305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS19305 PF00672 HAMP domain BJD94_RS19305 PF02203 Tar ligand binding domain homologue BJD94_RS19310 PF01584 CheW-like domain BJD94_RS19315 PF01584 CheW-like domain BJD94_RS19320 PF01584 CheW-like domain BJD94_RS19320 PF02895 Signal transducing histidine kinase, homodimeric domain BJD94_RS19320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS19320 PF01627 Hpt domain BJD94_RS19320 PF09078 CheY binding BJD94_RS19325 PF00072 Response regulator receiver domain BJD94_RS19335 PF05127 Helicase BJD94_RS19335 PF13718 GNAT acetyltransferase 2 BJD94_RS19340 PF08775 ParB family BJD94_RS19340 PF02195 ParB-like nuclease domain BJD94_RS19345 PF18607 ParA helix turn helix domain BJD94_RS19345 PF13614 AAA domain BJD94_RS19360 PF00005 ABC transporter BJD94_RS19360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS19365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS19365 PF00005 ABC transporter BJD94_RS19375 PF08719 Domain of unknown function (DUF1768) BJD94_RS19375 PF00925 GTP cyclohydrolase II BJD94_RS19385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS19385 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS19385 PF00672 HAMP domain BJD94_RS19385 PF01627 Hpt domain BJD94_RS19385 PF00072 Response regulator receiver domain BJD94_RS19385 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD94_RS19395 PF01709 Transcriptional regulator BJD94_RS19410 PF00005 ABC transporter BJD94_RS19415 PF12704 MacB-like periplasmic core domain BJD94_RS19415 PF02687 FtsX-like permease family BJD94_RS19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS19430 PF06580 Histidine kinase BJD94_RS19430 PF07694 5TMR of 5TMR-LYT BJD94_RS19435 PF00072 Response regulator receiver domain BJD94_RS19435 PF04397 LytTr DNA-binding domain BJD94_RS19440 PF17200 Single Cache domain 2 BJD94_RS19440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS19440 PF00672 HAMP domain BJD94_RS19455 PF03616 Sodium/glutamate symporter BJD94_RS19460 PF03616 Sodium/glutamate symporter BJD94_RS19470 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BJD94_RS19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS19490 PF03466 LysR substrate binding domain BJD94_RS19495 PF01609 Transposase DDE domain BJD94_RS19495 PF13006 Insertion element 4 transposase N-terminal BJD94_RS19505 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD94_RS19505 PF06029 AlkA N-terminal domain BJD94_RS19510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BJD94_RS19510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BJD94_RS19515 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BJD94_RS19525 PF03600 Citrate transporter BJD94_RS19535 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS19535 PF08361 MAATS-type transcriptional repressor, C-terminal region BJD94_RS19545 PF00704 Glycosyl hydrolases family 18 BJD94_RS19545 PF08329 Chitinase A, N-terminal domain BJD94_RS19555 PF06865 Pyrimidine/purine nucleoside phosphorylase BJD94_RS19560 PF05726 Pirin C-terminal cupin domain BJD94_RS19560 PF02678 Pirin BJD94_RS19570 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS19570 PF00563 EAL domain BJD94_RS19575 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS19575 PF17158 Membrane-associated sensor, integral membrane domain BJD94_RS19580 PF00128 Alpha amylase, catalytic domain BJD94_RS19580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD94_RS19585 PF02264 LamB porin BJD94_RS19590 PF07148 Maltose operon periplasmic protein precursor (MalM) BJD94_RS19600 PF01547 Bacterial extracellular solute-binding protein BJD94_RS19605 PF00128 Alpha amylase, catalytic domain BJD94_RS19605 PF02903 Alpha amylase, N-terminal ig-like domain BJD94_RS19605 PF16657 Maltogenic Amylase, C-terminal domain BJD94_RS19615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD94_RS19615 PF18494 Pullulanase Ins domain BJD94_RS19615 PF17967 Pullulanase N2 domain BJD94_RS19615 PF11852 Domain of unknown function (DUF3372) BJD94_RS19615 PF03714 Bacterial pullanase-associated domain BJD94_RS19630 PF01276 Orn/Lys/Arg decarboxylase, major domain BJD94_RS19630 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BJD94_RS19630 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BJD94_RS19635 PF13520 Amino acid permease BJD94_RS19640 PF08543 Phosphomethylpyrimidine kinase BJD94_RS19670 PF00027 Cyclic nucleotide-binding domain BJD94_RS19670 PF13545 Crp-like helix-turn-helix domain BJD94_RS19675 PF00375 Sodium:dicarboxylate symporter family BJD94_RS19680 PF03193 RsgA GTPase BJD94_RS19685 PF04314 Copper chaperone PCu(A)C BJD94_RS19690 PF02630 SCO1/SenC BJD94_RS19715 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS19715 PF17874 MalT-like TPR region BJD94_RS19720 PF00343 Carbohydrate phosphorylase BJD94_RS19725 PF02446 4-alpha-glucanotransferase BJD94_RS19730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD94_RS19730 PF00128 Alpha amylase, catalytic domain BJD94_RS19730 PF02806 Alpha amylase, C-terminal all-beta domain BJD94_RS19735 PF00672 HAMP domain BJD94_RS19735 PF16591 Helical bimodular sensor domain BJD94_RS19735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS19740 PF00919 Uncharacterized protein family UPF0004 BJD94_RS19740 PF04055 Radical SAM superfamily BJD94_RS19740 PF18693 TRAM domain BJD94_RS19745 PF01810 LysE type translocator BJD94_RS19750 PF01037 Lrp/AsnC ligand binding domain BJD94_RS19770 PF01470 Pyroglutamyl peptidase BJD94_RS19780 PF02661 Fic/DOC family BJD94_RS19790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS19790 PF00672 HAMP domain BJD94_RS19790 PF02743 Cache domain BJD94_RS19800 PF00171 Aldehyde dehydrogenase family BJD94_RS19805 PF02798 Glutathione S-transferase, N-terminal domain BJD94_RS19810 PF01966 HD domain BJD94_RS19815 PF02690 Na+/Pi-cotransporter BJD94_RS19820 PF05193 Peptidase M16 inactive domain BJD94_RS19820 PF00675 Insulinase (Peptidase family M16) BJD94_RS19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS19830 PF03466 LysR substrate binding domain BJD94_RS19840 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS19840 PF08521 Two-component sensor kinase N-terminal BJD94_RS19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS19845 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS19845 PF00072 Response regulator receiver domain BJD94_RS19860 PF00501 AMP-binding enzyme BJD94_RS19870 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS19880 PF02264 LamB porin BJD94_RS19890 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS19900 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS19905 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS19910 PF00232 Glycosyl hydrolase family 1 BJD94_RS19915 PF00005 ABC transporter BJD94_RS19915 PF17912 MalK OB fold domain BJD94_RS19920 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS19930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS19935 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS19940 PF12911 N-terminal TM domain of oligopeptide transport permease C BJD94_RS19940 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS19945 PF00005 ABC transporter BJD94_RS19945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS19950 PF00005 ABC transporter BJD94_RS19950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BJD94_RS19960 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS19970 PF00722 Glycosyl hydrolases family 16 BJD94_RS19975 PF02264 LamB porin BJD94_RS19980 PF12833 Helix-turn-helix domain BJD94_RS19990 PF14310 Fibronectin type III-like domain BJD94_RS19990 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD94_RS19990 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD94_RS19995 PF01554 MatE BJD94_RS20005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS20005 PF00529 HlyD membrane-fusion protein of T1SS BJD94_RS20035 PF00849 RNA pseudouridylate synthase BJD94_RS20040 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS20040 PF17151 Periplasmic sensor domain BJD94_RS20045 PF00873 AcrB/AcrD/AcrF family BJD94_RS20060 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS20065 PF02653 Branched-chain amino acid transport system / permease component BJD94_RS20070 PF00005 ABC transporter BJD94_RS20075 PF13407 Periplasmic binding protein domain BJD94_RS20080 PF00703 Glycosyl hydrolases family 2 BJD94_RS20080 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD94_RS20080 PF02929 Beta galactosidase small chain BJD94_RS20080 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BJD94_RS20080 PF16353 Domain of unknown function(DUF4981) BJD94_RS20090 PF16874 Glycosyl hydrolase family 36 C-terminal domain BJD94_RS20090 PF16875 Glycosyl hydrolase family 36 N-terminal domain BJD94_RS20105 PF00588 SpoU rRNA Methylase family BJD94_RS20105 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJD94_RS20110 PF11953 Domain of unknown function (DUF3470) BJD94_RS20110 PF00037 4Fe-4S binding domain BJD94_RS20120 PF00392 Bacterial regulatory proteins, gntR family BJD94_RS20120 PF07702 UTRA domain BJD94_RS20125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD94_RS20125 PF02378 Phosphotransferase system, EIIC BJD94_RS20125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD94_RS20130 PF07748 Glycosyl hydrolases family 38 C-terminal domain BJD94_RS20130 PF09261 Alpha mannosidase middle domain BJD94_RS20130 PF01074 Glycosyl hydrolases family 38 N-terminal domain BJD94_RS20135 PF02595 Glycerate kinase family BJD94_RS20140 PF01238 Phosphomannose isomerase type I BJD94_RS20145 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS20145 PF00593 TonB dependent receptor BJD94_RS20150 PF12833 Helix-turn-helix domain BJD94_RS20175 PF01590 GAF domain BJD94_RS20175 PF00158 Sigma-54 interaction domain BJD94_RS20190 PF01238 Phosphomannose isomerase type I BJD94_RS20195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD94_RS20195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD94_RS20195 PF02378 Phosphotransferase system, EIIC BJD94_RS20200 PF12833 Helix-turn-helix domain BJD94_RS20210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD94_RS20225 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD94_RS20225 PF07971 Glycosyl hydrolase family 92 BJD94_RS20230 PF07971 Glycosyl hydrolase family 92 BJD94_RS20230 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD94_RS20240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD94_RS20240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD94_RS20255 PF12838 4Fe-4S dicluster domain BJD94_RS20255 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BJD94_RS20255 PF01568 Molydopterin dinucleotide binding domain BJD94_RS20255 PF00384 Molybdopterin oxidoreductase BJD94_RS20255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJD94_RS20265 PF01048 Phosphorylase superfamily BJD94_RS20270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS20270 PF03466 LysR substrate binding domain BJD94_RS20275 PF01752 Collagenase BJD94_RS20275 PF04151 Bacterial pre-peptidase C-terminal domain BJD94_RS20275 PF08453 Peptidase family M9 N-terminal BJD94_RS20300 PF04973 Nicotinamide mononucleotide transporter BJD94_RS20305 PF01048 Phosphorylase superfamily BJD94_RS20325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS20325 PF03466 LysR substrate binding domain BJD94_RS20340 PF00764 Arginosuccinate synthase BJD94_RS20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS20345 PF03466 LysR substrate binding domain BJD94_RS20350 PF00375 Sodium:dicarboxylate symporter family BJD94_RS20380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS20380 PF03466 LysR substrate binding domain BJD94_RS20390 PF00881 Nitroreductase family BJD94_RS20395 PF05958 tRNA (Uracil-5-)-methyltransferase BJD94_RS20400 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BJD94_RS20435 PF00392 Bacterial regulatory proteins, gntR family BJD94_RS20435 PF00155 Aminotransferase class I and II BJD94_RS20445 PF17158 Membrane-associated sensor, integral membrane domain BJD94_RS20445 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS20460 PF04231 Endonuclease I BJD94_RS20465 PF16657 Maltogenic Amylase, C-terminal domain BJD94_RS20465 PF02903 Alpha amylase, N-terminal ig-like domain BJD94_RS20465 PF00128 Alpha amylase, catalytic domain BJD94_RS20475 PF00884 Sulfatase BJD94_RS20480 PF00884 Sulfatase BJD94_RS20480 PF08019 Phosphoethanolamine transferase EptA/EptB BJD94_RS20485 PF01219 Prokaryotic diacylglycerol kinase BJD94_RS20490 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS20490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS20490 PF00672 HAMP domain BJD94_RS20495 PF00072 Response regulator receiver domain BJD94_RS20495 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS20510 PF00106 short chain dehydrogenase BJD94_RS20515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS20515 PF03466 LysR substrate binding domain BJD94_RS20535 PF01323 DSBA-like thioredoxin domain BJD94_RS20540 PF00282 Pyridoxal-dependent decarboxylase conserved domain BJD94_RS20545 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BJD94_RS20570 PF01569 PAP2 superfamily BJD94_RS20575 PF08543 Phosphomethylpyrimidine kinase BJD94_RS20580 PF04013 Putative SAM-dependent RNA methyltransferase BJD94_RS20635 PF10928 Protein of unknown function (DUF2810) BJD94_RS20645 PF07690 Major Facilitator Superfamily BJD94_RS20660 PF00056 lactate/malate dehydrogenase, NAD binding domain BJD94_RS20660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BJD94_RS20665 PF13416 Bacterial extracellular solute-binding protein BJD94_RS20670 PF00593 TonB dependent receptor BJD94_RS20670 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS20680 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS20680 PF00563 EAL domain BJD94_RS20680 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS20690 PF01906 Putative heavy-metal-binding BJD94_RS20695 PF03466 LysR substrate binding domain BJD94_RS20695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS20705 PF01966 HD domain BJD94_RS20725 PF00080 Copper/zinc superoxide dismutase (SODC) BJD94_RS20735 PF06628 Catalase-related immune-responsive BJD94_RS20735 PF00199 Catalase BJD94_RS20755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD94_RS20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS20760 PF03466 LysR substrate binding domain BJD94_RS20765 PF07690 Major Facilitator Superfamily BJD94_RS20775 PF05922 Peptidase inhibitor I9 BJD94_RS20775 PF00082 Subtilase family BJD94_RS20780 PF00657 GDSL-like Lipase/Acylhydrolase BJD94_RS20785 PF00155 Aminotransferase class I and II BJD94_RS20790 PF00107 Zinc-binding dehydrogenase BJD94_RS20790 PF08240 Alcohol dehydrogenase GroES-like domain BJD94_RS20830 PF08212 Lipocalin-like domain BJD94_RS20855 PF01609 Transposase DDE domain BJD94_RS20855 PF13006 Insertion element 4 transposase N-terminal BJD94_RS20880 PF04076 Bacterial OB fold (BOF) protein BJD94_RS20890 PF03412 Peptidase C39 family BJD94_RS20890 PF00664 ABC transporter transmembrane region BJD94_RS20890 PF00005 ABC transporter BJD94_RS20895 PF00529 HlyD membrane-fusion protein of T1SS BJD94_RS20900 PF02321 Outer membrane efflux protein BJD94_RS20915 PF00194 Eukaryotic-type carbonic anhydrase BJD94_RS20920 PF00924 Mechanosensitive ion channel BJD94_RS20930 PF00672 HAMP domain BJD94_RS20930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS20935 PF07238 PilZ domain BJD94_RS20935 PF12945 Flagellar protein YcgR BJD94_RS20945 PF13302 Acetyltransferase (GNAT) domain BJD94_RS20950 PF07676 WD40-like Beta Propeller Repeat BJD94_RS20950 PF03572 Peptidase family S41 BJD94_RS20950 PF14684 Tricorn protease C1 domain BJD94_RS20950 PF14685 Tricorn protease PDZ domain BJD94_RS20965 PF12558 ATP-binding cassette cobalt transporter BJD94_RS20965 PF00005 ABC transporter BJD94_RS20970 PF07155 ECF-type riboflavin transporter, S component BJD94_RS20975 PF00529 HlyD membrane-fusion protein of T1SS BJD94_RS20975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD94_RS20980 PF11742 Protein of unknown function (DUF3302) BJD94_RS20985 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS21000 PF01048 Phosphorylase superfamily BJD94_RS21005 PF08349 Protein of unknown function (DUF1722) BJD94_RS21010 PF13411 MerR HTH family regulatory protein BJD94_RS21015 PF03441 FAD binding domain of DNA photolyase BJD94_RS21015 PF00875 DNA photolyase BJD94_RS21020 PF03734 L,D-transpeptidase catalytic domain BJD94_RS21020 PF17969 L,D-transpeptidase C-terminal domain BJD94_RS21020 PF01476 LysM domain BJD94_RS21060 PF00271 Helicase conserved C-terminal domain BJD94_RS21060 PF00270 DEAD/DEAH box helicase BJD94_RS21065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BJD94_RS21065 PF00326 Prolyl oligopeptidase family BJD94_RS21070 PF00593 TonB dependent receptor BJD94_RS21070 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS21070 PF04886 PT repeat BJD94_RS21095 PF00672 HAMP domain BJD94_RS21095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21095 PF02743 Cache domain BJD94_RS21100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21100 PF12729 Four helix bundle sensory module for signal transduction BJD94_RS21100 PF00672 HAMP domain BJD94_RS21105 PF12849 PBP superfamily domain BJD94_RS21110 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS21115 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS21120 PF00005 ABC transporter BJD94_RS21125 PF01590 GAF domain BJD94_RS21125 PF00360 Phytochrome region BJD94_RS21125 PF00563 EAL domain BJD94_RS21125 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS21135 PF00092 von Willebrand factor type A domain BJD94_RS21135 PF07584 Aerotolerance regulator N-terminal BJD94_RS21150 PF01882 Protein of unknown function DUF58 BJD94_RS21155 PF07726 ATPase family associated with various cellular activities (AAA) BJD94_RS21155 PF17863 AAA lid domain BJD94_RS21160 PF02743 Cache domain BJD94_RS21160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21160 PF00672 HAMP domain BJD94_RS21170 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS21175 PF00196 Bacterial regulatory proteins, luxR family BJD94_RS21185 PF00005 ABC transporter BJD94_RS21185 PF00664 ABC transporter transmembrane region BJD94_RS21190 PF00529 HlyD membrane-fusion protein of T1SS BJD94_RS21205 PF13439 Glycosyltransferase Family 4 BJD94_RS21205 PF00534 Glycosyl transferases group 1 BJD94_RS21215 PF00534 Glycosyl transferases group 1 BJD94_RS21215 PF13439 Glycosyltransferase Family 4 BJD94_RS21220 PF13807 G-rich domain on putative tyrosine kinase BJD94_RS21220 PF13614 AAA domain BJD94_RS21220 PF02706 Chain length determinant protein BJD94_RS21225 PF10531 SLBB domain BJD94_RS21225 PF02563 Polysaccharide biosynthesis/export protein BJD94_RS21235 PF02397 Bacterial sugar transferase BJD94_RS21240 PF08402 TOBE domain BJD94_RS21240 PF00005 ABC transporter BJD94_RS21250 PF01547 Bacterial extracellular solute-binding protein BJD94_RS21255 PF14785 Maltose transport system permease protein MalF P2 domain BJD94_RS21255 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS21260 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS21290 PF05661 Protein of unknown function (DUF808) BJD94_RS21295 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS21295 PF17151 Periplasmic sensor domain BJD94_RS21300 PF01979 Amidohydrolase family BJD94_RS21305 PF03476 MOSC N-terminal beta barrel domain BJD94_RS21305 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD94_RS21305 PF03476 MOSC N-terminal beta barrel domain BJD94_RS21305 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD94_RS21305 PF03473 MOSC domain BJD94_RS21305 PF03473 MOSC domain BJD94_RS21310 PF02540 NAD synthase BJD94_RS21355 PF00005 ABC transporter BJD94_RS21360 PF01032 FecCD transport family BJD94_RS21370 PF02472 Biopolymer transport protein ExbD/TolR BJD94_RS21375 PF01618 MotA/TolQ/ExbB proton channel family BJD94_RS21380 PF03544 Gram-negative bacterial TonB protein C-terminal BJD94_RS21385 PF04055 Radical SAM superfamily BJD94_RS21390 PF06228 Haem utilisation ChuX/HutX BJD94_RS21395 PF01243 Pyridoxamine 5'-phosphate oxidase BJD94_RS21405 PF01584 CheW-like domain BJD94_RS21405 PF00072 Response regulator receiver domain BJD94_RS21425 PF00582 Universal stress protein family BJD94_RS21430 PF00128 Alpha amylase, catalytic domain BJD94_RS21435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21435 PF00672 HAMP domain BJD94_RS21435 PF02743 Cache domain BJD94_RS21440 PF00672 HAMP domain BJD94_RS21440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21440 PF02743 Cache domain BJD94_RS21455 PF07670 Nucleoside recognition BJD94_RS21475 PF01551 Peptidase family M23 BJD94_RS21475 PF08525 Opacity-associated protein A N-terminal motif BJD94_RS21475 PF01476 LysM domain BJD94_RS21480 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS21495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD94_RS21495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJD94_RS21520 PF07662 Na+ dependent nucleoside transporter C-terminus BJD94_RS21520 PF01773 Na+ dependent nucleoside transporter N-terminus BJD94_RS21520 PF07670 Nucleoside recognition BJD94_RS21535 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS21535 PF00563 EAL domain BJD94_RS21535 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS21540 PF12729 Four helix bundle sensory module for signal transduction BJD94_RS21540 PF00672 HAMP domain BJD94_RS21540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21555 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS21560 PF01625 Peptide methionine sulfoxide reductase BJD94_RS21560 PF01641 SelR domain BJD94_RS21565 PF02566 OsmC-like protein BJD94_RS21570 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BJD94_RS21570 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS21570 PF14602 Hexapeptide repeat of succinyl-transferase BJD94_RS21585 PF03466 LysR substrate binding domain BJD94_RS21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS21590 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS21605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21605 PF00672 HAMP domain BJD94_RS21615 PF00155 Aminotransferase class I and II BJD94_RS21620 PF01497 Periplasmic binding protein BJD94_RS21620 PF12833 Helix-turn-helix domain BJD94_RS21625 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS21630 PF00202 Aminotransferase class-III BJD94_RS21635 PF00266 Aminotransferase class-V BJD94_RS21645 PF00005 ABC transporter BJD94_RS21650 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS21655 PF07702 UTRA domain BJD94_RS21655 PF00392 Bacterial regulatory proteins, gntR family BJD94_RS21665 PF01266 FAD dependent oxidoreductase BJD94_RS21670 PF03466 LysR substrate binding domain BJD94_RS21670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS21680 PF00854 POT family BJD94_RS21685 PF03315 Serine dehydratase beta chain BJD94_RS21685 PF03313 Serine dehydratase alpha chain BJD94_RS21705 PF07943 Penicillin-binding protein 5, C-terminal domain BJD94_RS21705 PF00768 D-alanyl-D-alanine carboxypeptidase BJD94_RS21725 PF13977 BetI-type transcriptional repressor, C-terminal BJD94_RS21725 PF00440 Bacterial regulatory proteins, tetR family BJD94_RS21730 PF00171 Aldehyde dehydrogenase family BJD94_RS21735 PF00732 GMC oxidoreductase BJD94_RS21735 PF05199 GMC oxidoreductase BJD94_RS21740 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BJD94_RS21745 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS21750 PF00571 CBS domain BJD94_RS21750 PF00005 ABC transporter BJD94_RS21755 PF04224 Protein of unknown function, DUF417 BJD94_RS21760 PF00391 PEP-utilising enzyme, mobile domain BJD94_RS21760 PF02896 PEP-utilising enzyme, TIM barrel domain BJD94_RS21760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BJD94_RS21765 PF03618 Kinase/pyrophosphorylase BJD94_RS21785 PF01266 FAD dependent oxidoreductase BJD94_RS21785 PF04324 BFD-like [2Fe-2S] binding domain BJD94_RS21790 PF00890 FAD binding domain BJD94_RS21795 PF13183 4Fe-4S dicluster domain BJD94_RS21795 PF02754 Cysteine-rich domain BJD94_RS21810 PF02016 LD-carboxypeptidase N-terminal domain BJD94_RS21810 PF17676 LD-carboxypeptidase C-terminal domain BJD94_RS21815 PF07995 Glucose / Sorbosone dehydrogenase BJD94_RS21825 PF00465 Iron-containing alcohol dehydrogenase BJD94_RS21830 PF00012 Hsp70 protein BJD94_RS21835 PF00581 Rhodanese-like domain BJD94_RS21860 PF13533 Biotin-lipoyl like BJD94_RS21865 PF00873 AcrB/AcrD/AcrF family BJD94_RS21870 PF13194 Domain of unknown function (DUF4010) BJD94_RS21875 PF03413 Peptidase propeptide and YPEB domain BJD94_RS21875 PF07504 Fungalysin/Thermolysin Propeptide Motif BJD94_RS21875 PF02868 Thermolysin metallopeptidase, alpha-helical domain BJD94_RS21875 PF01447 Thermolysin metallopeptidase, catalytic domain BJD94_RS21895 PF03222 Tryptophan/tyrosine permease family BJD94_RS21900 PF00149 Calcineurin-like phosphoesterase BJD94_RS21910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS21910 PF00672 HAMP domain BJD94_RS21910 PF02743 Cache domain BJD94_RS21920 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BJD94_RS21920 PF18416 N-acetylglucosamine binding protein domain 2 BJD94_RS21925 PF00892 EamA-like transporter family BJD94_RS21935 PF04266 ASCH domain BJD94_RS21940 PF01569 PAP2 superfamily BJD94_RS21950 PF03606 C4-dicarboxylate anaerobic carrier BJD94_RS21955 PF00171 Aldehyde dehydrogenase family BJD94_RS21960 PF00034 Cytochrome c BJD94_RS21965 PF01212 Beta-eliminating lyase BJD94_RS21975 PF12592 Protein of unknown function (DUF3763) BJD94_RS21975 PF17868 AAA lid domain BJD94_RS21975 PF07728 AAA domain (dynein-related subfamily) BJD94_RS21980 PF05762 VWA domain containing CoxE-like protein BJD94_RS21985 PF04237 YjbR BJD94_RS22000 PF05025 RbsD / FucU transport protein family BJD94_RS22005 PF00005 ABC transporter BJD94_RS22010 PF02653 Branched-chain amino acid transport system / permease component BJD94_RS22015 PF13407 Periplasmic binding protein domain BJD94_RS22020 PF00294 pfkB family carbohydrate kinase BJD94_RS22025 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS22035 PF00072 Response regulator receiver domain BJD94_RS22035 PF01584 CheW-like domain BJD94_RS22045 PF00583 Acetyltransferase (GNAT) family BJD94_RS22050 PF01926 50S ribosome-binding GTPase BJD94_RS22055 PF00672 HAMP domain BJD94_RS22055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS22055 PF12729 Four helix bundle sensory module for signal transduction BJD94_RS22065 PF12320 Type 5 capsule protein repressor C-terminal domain BJD94_RS22065 PF00149 Calcineurin-like phosphoesterase BJD94_RS22070 PF13476 AAA domain BJD94_RS22080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS22080 PF03466 LysR substrate binding domain BJD94_RS22100 PF04972 BON domain BJD94_RS22100 PF00263 Bacterial type II and III secretion system protein BJD94_RS22100 PF13629 Pilus formation protein N terminal region BJD94_RS22115 PF00437 Type II/IV secretion system protein BJD94_RS22190 PF00989 PAS fold BJD94_RS22190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS22190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BJD94_RS22190 PF17203 Single cache domain 3 BJD94_RS22195 PF12431 Transcriptional regulator BJD94_RS22195 PF00072 Response regulator receiver domain BJD94_RS22200 PF12464 Maltose acetyltransferase BJD94_RS22200 PF00132 Bacterial transferase hexapeptide (six repeats) BJD94_RS22220 PF01032 FecCD transport family BJD94_RS22225 PF01032 FecCD transport family BJD94_RS22230 PF00005 ABC transporter BJD94_RS22235 PF13411 MerR HTH family regulatory protein BJD94_RS22265 PF12805 FUSC-like inner membrane protein yccS BJD94_RS22270 PF00580 UvrD/REP helicase N-terminal domain BJD94_RS22270 PF12462 DNA helicase IV / RNA helicase N terminal BJD94_RS22270 PF13361 UvrD-like helicase C-terminal domain BJD94_RS22275 PF02142 MGS-like domain BJD94_RS22280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BJD94_RS22285 PF00072 Response regulator receiver domain BJD94_RS22285 PF01627 Hpt domain BJD94_RS22285 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD94_RS22285 PF00672 HAMP domain BJD94_RS22285 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS22305 PF03781 Sulfatase-modifying factor enzyme 1 BJD94_RS22310 PF03264 NapC/NirT cytochrome c family, N-terminal region BJD94_RS22325 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) BJD94_RS22330 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB BJD94_RS22335 PF00270 DEAD/DEAH box helicase BJD94_RS22335 PF03880 DbpA RNA binding domain BJD94_RS22335 PF00271 Helicase conserved C-terminal domain BJD94_RS22340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS22340 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS22340 PF09456 RcsC Alpha-Beta-Loop (ABL) BJD94_RS22340 PF00072 Response regulator receiver domain BJD94_RS22345 PF00498 FHA domain BJD94_RS22345 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS22345 PF00563 EAL domain BJD94_RS22360 PF00563 EAL domain BJD94_RS22360 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS22360 PF03707 Bacterial signalling protein N terminal repeat BJD94_RS22370 PF12849 PBP superfamily domain BJD94_RS22380 PF12833 Helix-turn-helix domain BJD94_RS22385 PF00773 RNB domain BJD94_RS22385 PF08206 Ribonuclease B OB domain BJD94_RS22385 PF00575 S1 RNA binding domain BJD94_RS22390 PF00270 DEAD/DEAH box helicase BJD94_RS22390 PF00271 Helicase conserved C-terminal domain BJD94_RS22390 PF03880 DbpA RNA binding domain BJD94_RS22395 PF00871 Acetokinase family BJD94_RS22400 PF00106 short chain dehydrogenase BJD94_RS22405 PF07690 Major Facilitator Superfamily BJD94_RS22410 PF03466 LysR substrate binding domain BJD94_RS22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS22415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD94_RS22420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD94_RS22425 PF08240 Alcohol dehydrogenase GroES-like domain BJD94_RS22425 PF00107 Zinc-binding dehydrogenase BJD94_RS22430 PF00884 Sulfatase BJD94_RS22445 PF04055 Radical SAM superfamily BJD94_RS22445 PF13186 Iron-sulfur cluster-binding domain BJD94_RS22450 PF17863 AAA lid domain BJD94_RS22450 PF07726 ATPase family associated with various cellular activities (AAA) BJD94_RS22465 PF00092 von Willebrand factor type A domain BJD94_RS22480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS22480 PF03466 LysR substrate binding domain BJD94_RS22485 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase BJD94_RS22490 PF03781 Sulfatase-modifying factor enzyme 1 BJD94_RS22495 PF04055 Radical SAM superfamily BJD94_RS22495 PF13186 Iron-sulfur cluster-binding domain BJD94_RS22505 PF08774 VRR-NUC domain BJD94_RS22505 PF18081 Fanconi anemia-associated nuclease SAP domain BJD94_RS22525 PF07690 Major Facilitator Superfamily BJD94_RS22530 PF13533 Biotin-lipoyl like BJD94_RS22550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS22550 PF03466 LysR substrate binding domain BJD94_RS22555 PF02627 Carboxymuconolactone decarboxylase family BJD94_RS22570 PF00795 Carbon-nitrogen hydrolase BJD94_RS22580 PF00664 ABC transporter transmembrane region BJD94_RS22580 PF00005 ABC transporter BJD94_RS22595 PF02347 Glycine cleavage system P-protein BJD94_RS22600 PF01597 Glycine cleavage H-protein BJD94_RS22605 PF00464 Serine hydroxymethyltransferase BJD94_RS22615 PF08669 Glycine cleavage T-protein C-terminal barrel domain BJD94_RS22615 PF01571 Aminomethyltransferase folate-binding domain BJD94_RS22640 PF00873 AcrB/AcrD/AcrF family BJD94_RS22650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD94_RS22650 PF02378 Phosphotransferase system, EIIC BJD94_RS22655 PF00294 pfkB family carbohydrate kinase BJD94_RS22660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD94_RS22660 PF00381 PTS HPr component phosphorylation site BJD94_RS22665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BJD94_RS22665 PF00356 Bacterial regulatory proteins, lacI family BJD94_RS22690 PF02887 Pyruvate kinase, alpha/beta domain BJD94_RS22690 PF00224 Pyruvate kinase, barrel domain BJD94_RS22695 PF07690 Major Facilitator Superfamily BJD94_RS22705 PF02743 Cache domain BJD94_RS22705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS22705 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS22710 PF02954 Bacterial regulatory protein, Fis family BJD94_RS22710 PF00072 Response regulator receiver domain BJD94_RS22710 PF14532 Sigma-54 interaction domain BJD94_RS22715 PF00465 Iron-containing alcohol dehydrogenase BJD94_RS22720 PF12833 Helix-turn-helix domain BJD94_RS22720 PF06719 AraC-type transcriptional regulator N-terminus BJD94_RS22725 PF06483 Chitinase C BJD94_RS22725 PF00704 Glycosyl hydrolases family 18 BJD94_RS22730 PF00483 Nucleotidyl transferase BJD94_RS22735 PF01268 Formate--tetrahydrofolate ligase BJD94_RS22740 PF00294 pfkB family carbohydrate kinase BJD94_RS22755 PF11849 Domain of unknown function (DUF3369) BJD94_RS22760 PF13419 Haloacid dehalogenase-like hydrolase BJD94_RS22770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS22770 PF00672 HAMP domain BJD94_RS22775 PF04336 Acyl carrier protein phosphodiesterase BJD94_RS22780 PF00271 Helicase conserved C-terminal domain BJD94_RS22780 PF00270 DEAD/DEAH box helicase BJD94_RS22795 PF01292 Prokaryotic cytochrome b561 BJD94_RS22800 PF04264 YceI-like domain BJD94_RS22805 PF01226 Formate/nitrite transporter BJD94_RS22810 PF03466 LysR substrate binding domain BJD94_RS22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS22815 PF06496 Protein of unknown function (DUF1097) BJD94_RS22820 PF11398 Protein of unknown function (DUF2813) BJD94_RS22825 PF02872 5'-nucleotidase, C-terminal domain BJD94_RS22825 PF00149 Calcineurin-like phosphoesterase BJD94_RS22830 PF03741 Integral membrane protein TerC family BJD94_RS22840 PF00892 EamA-like transporter family BJD94_RS22860 PF12262 Bacterial virulence factor lipase N-terminal BJD94_RS22865 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD94_RS22880 PF03061 Thioesterase superfamily BJD94_RS22890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BJD94_RS22890 PF12793 Sugar transport-related sRNA regulator N-term BJD94_RS22900 PF00128 Alpha amylase, catalytic domain BJD94_RS22900 PF16657 Maltogenic Amylase, C-terminal domain BJD94_RS22905 PF03466 LysR substrate binding domain BJD94_RS22905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS22925 PF00226 DnaJ domain BJD94_RS22925 PF00684 DnaJ central domain BJD94_RS22925 PF01556 DnaJ C terminal domain BJD94_RS22940 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS22940 PF00498 FHA domain BJD94_RS22940 PF00563 EAL domain BJD94_RS22945 PF12241 Trans-2-enoyl-CoA reductase catalytic region BJD94_RS22945 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BJD94_RS22945 PF07055 Enoyl reductase FAD binding domain BJD94_RS22950 PF13472 GDSL-like Lipase/Acylhydrolase family BJD94_RS22955 PF00005 ABC transporter BJD94_RS22965 PF01266 FAD dependent oxidoreductase BJD94_RS22965 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BJD94_RS22970 PF02626 Carboxyltransferase domain, subdomain A and B BJD94_RS22975 PF02682 Carboxyltransferase domain, subdomain C and D BJD94_RS22980 PF03746 LamB/YcsF family BJD94_RS22990 PF13426 PAS domain BJD94_RS22990 PF05231 MASE1 BJD94_RS22990 PF00563 EAL domain BJD94_RS22990 PF08448 PAS fold BJD94_RS22990 PF08447 PAS fold BJD94_RS22990 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS22995 PF00593 TonB dependent receptor BJD94_RS22995 PF07715 TonB-dependent Receptor Plug Domain BJD94_RS23000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD94_RS23000 PF03466 LysR substrate binding domain BJD94_RS23005 PF00583 Acetyltransferase (GNAT) family BJD94_RS23005 PF13380 CoA binding domain BJD94_RS23005 PF13607 Succinyl-CoA ligase like flavodoxin domain BJD94_RS23010 PF05036 Sporulation related domain BJD94_RS23015 PF07478 D-ala D-ala ligase C-terminus BJD94_RS23015 PF01820 D-ala D-ala ligase N-terminus BJD94_RS23025 PF01253 Translation initiation factor SUI1 BJD94_RS23035 PF03701 Uncharacterised protein family (UPF0181) BJD94_RS23050 PF00072 Response regulator receiver domain BJD94_RS23050 PF00486 Transcriptional regulatory protein, C terminal BJD94_RS23060 PF02233 NAD(P) transhydrogenase beta subunit BJD94_RS23065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BJD94_RS23065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BJD94_RS23065 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BJD94_RS23080 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS23090 PF08448 PAS fold BJD94_RS23090 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS23100 PF01047 MarR family BJD94_RS23105 PF00892 EamA-like transporter family BJD94_RS23110 PF03459 TOBE domain BJD94_RS23110 PF00005 ABC transporter BJD94_RS23115 PF00528 Binding-protein-dependent transport system inner membrane component BJD94_RS23125 PF07685 CobB/CobQ-like glutamine amidotransferase domain BJD94_RS23125 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BJD94_RS23140 PF08443 RimK-like ATP-grasp domain BJD94_RS23140 PF18030 RimK PreATP-grasp domain BJD94_RS23145 PF00155 Aminotransferase class I and II BJD94_RS23155 PF03477 ATP cone domain BJD94_RS23155 PF13597 Anaerobic ribonucleoside-triphosphate reductase BJD94_RS23165 PF00873 AcrB/AcrD/AcrF family BJD94_RS23180 PF04143 Sulphur transport BJD94_RS23195 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS23195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD94_RS23210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD94_RS23210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD94_RS23215 PF00085 Thioredoxin BJD94_RS23220 PF07690 Major Facilitator Superfamily BJD94_RS23225 PF12833 Helix-turn-helix domain BJD94_RS23230 PF01554 MatE BJD94_RS23235 PF11756 Nitrous oxide-stimulated promoter BJD94_RS23245 PF00672 HAMP domain BJD94_RS23245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS23245 PF17200 Single Cache domain 2 BJD94_RS23250 PF03605 Anaerobic c4-dicarboxylate membrane transporter BJD94_RS23265 PF02472 Biopolymer transport protein ExbD/TolR BJD94_RS23270 PF01618 MotA/TolQ/ExbB proton channel family BJD94_RS23275 PF01618 MotA/TolQ/ExbB proton channel family BJD94_RS23295 PF10414 Sirohaem synthase dimerisation region BJD94_RS23295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD94_RS23295 PF14824 Sirohaem biosynthesis protein central BJD94_RS23305 PF13806 Rieske-like [2Fe-2S] domain BJD94_RS23310 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD94_RS23310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJD94_RS23310 PF04324 BFD-like [2Fe-2S] binding domain BJD94_RS23310 PF18267 Rubredoxin NAD+ reductase C-terminal domain BJD94_RS23310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJD94_RS23315 PF17200 Single Cache domain 2 BJD94_RS23315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD94_RS23315 PF00672 HAMP domain BJD94_RS23335 PF01575 MaoC like domain BJD94_RS23340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD94_RS23340 PF00512 His Kinase A (phospho-acceptor) domain BJD94_RS23340 PF01627 Hpt domain BJD94_RS23340 PF00072 Response regulator receiver domain BJD94_RS23340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD94_RS23340 PF00672 HAMP domain BJD94_RS23345 PF03705 CheR methyltransferase, all-alpha domain BJD94_RS23345 PF01739 CheR methyltransferase, SAM binding domain BJD94_RS23350 PF01339 CheB methylesterase BJD94_RS23355 PF00563 EAL domain BJD94_RS23355 PF00990 Diguanylate cyclase, GGDEF domain BJD94_RS23355 PF00360 Phytochrome region BJD94_RS23355 PF01590 GAF domain BJD94_RS23365 PF00491 Arginase family BJD94_RS23370 PF00271 Helicase conserved C-terminal domain BJD94_RS23370 PF00270 DEAD/DEAH box helicase BJD94_RS23380 PF07683 Cobalamin synthesis protein cobW C-terminal domain BJD94_RS23380 PF02492 CobW/HypB/UreG, nucleotide-binding domain