locus-tag class description VV_RS00005 PF00258 Flavodoxin VV_RS00075 PF01751 Toprim domain VV_RS00075 PF00204 DNA gyrase B VV_RS00075 PF00986 DNA gyrase B subunit, carboxyl terminus VV_RS00075 PF18053 DNA gyrase B subunit insert domain VV_RS00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS00120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VV_RS00120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VV_RS00120 PF00378 Enoyl-CoA hydratase/isomerase VV_RS00235 PF00873 AcrB/AcrD/AcrF family VV_RS00245 PF13533 Biotin-lipoyl like VV_RS00280 PF00258 Flavodoxin VV_RS00285 PF10396 GTP-binding protein TrmE N-terminus VV_RS00285 PF12631 MnmE helical domain VV_RS00285 PF01926 50S ribosome-binding GTPase VV_RS00290 PF14849 YidC periplasmic domain VV_RS00290 PF02096 60Kd inner membrane protein VV_RS00295 PF00825 Ribonuclease P VV_RS00300 PF00468 Ribosomal protein L34 VV_RS00305 PF00005 ABC transporter VV_RS00310 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS00315 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV_RS00320 PF11638 DnaA N-terminal domain VV_RS00320 PF00308 Bacterial dnaA protein VV_RS00320 PF08299 Bacterial dnaA protein helix-turn-helix VV_RS00325 PF00712 DNA polymerase III beta subunit, N-terminal domain VV_RS00325 PF02768 DNA polymerase III beta subunit, C-terminal domain VV_RS00325 PF02767 DNA polymerase III beta subunit, central domain VV_RS00330 PF02463 RecF/RecN/SMC N terminal domain VV_RS00335 PF18053 DNA gyrase B subunit insert domain VV_RS00335 PF01751 Toprim domain VV_RS00335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS00335 PF00986 DNA gyrase B subunit, carboxyl terminus VV_RS00335 PF00204 DNA gyrase B VV_RS00340 PF00011 Hsp20/alpha crystallin family VV_RS00345 PF00563 EAL domain VV_RS00345 PF00990 Diguanylate cyclase, GGDEF domain VV_RS00345 PF03707 Bacterial signalling protein N terminal repeat VV_RS00350 PF00155 Aminotransferase class I and II VV_RS00360 PF05746 DALR anticodon binding domain VV_RS00360 PF02092 Glycyl-tRNA synthetase beta subunit VV_RS00365 PF02091 Glycyl-tRNA synthetase alpha subunit VV_RS00370 PF01169 Uncharacterized protein family UPF0016 VV_RS00380 PF01206 Sulfurtransferase TusA VV_RS00390 PF03466 LysR substrate binding domain VV_RS00390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS00395 PF00107 Zinc-binding dehydrogenase VV_RS00395 PF08240 Alcohol dehydrogenase GroES-like domain VV_RS00400 PF00108 Thiolase, N-terminal domain VV_RS00400 PF02803 Thiolase, C-terminal domain VV_RS00405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VV_RS00405 PF00378 Enoyl-CoA hydratase/isomerase VV_RS00405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VV_RS00410 PF01205 Uncharacterized protein family UPF0029 VV_RS00410 PF09186 Domain of unknown function (DUF1949) VV_RS00415 PF02386 Cation transport protein VV_RS00420 PF12724 Flavodoxin domain VV_RS00455 PF03466 LysR substrate binding domain VV_RS00455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS00460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VV_RS00460 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VV_RS00465 PF04380 Membrane fusogenic activity VV_RS00470 PF00873 AcrB/AcrD/AcrF family VV_RS00475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV_RS00480 PF00440 Bacterial regulatory proteins, tetR family VV_RS00485 PF00580 UvrD/REP helicase N-terminal domain VV_RS00485 PF13361 UvrD-like helicase C-terminal domain VV_RS00490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VV_RS00520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS00520 PF00005 ABC transporter VV_RS00525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV_RS00530 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS00535 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS00535 PF12911 N-terminal TM domain of oligopeptide transport permease C VV_RS00570 PF03793 PASTA domain VV_RS00570 PF00069 Protein kinase domain VV_RS00580 PF00072 Response regulator receiver domain VV_RS00585 PF00356 Bacterial regulatory proteins, lacI family VV_RS00585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VV_RS00590 PF00920 Dehydratase family VV_RS00595 PF01202 Shikimate kinase VV_RS00600 PF02447 GntP family permease VV_RS00605 PF01081 KDPG and KHG aldolase VV_RS00625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV_RS00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS00630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VV_RS00635 PF01432 Peptidase family M3 VV_RS00640 PF01037 Lrp/AsnC ligand binding domain VV_RS00645 PF08448 PAS fold VV_RS00645 PF00563 EAL domain VV_RS00645 PF00990 Diguanylate cyclase, GGDEF domain VV_RS00650 PF04445 Putative SAM-dependent methyltransferase VV_RS00660 PF00892 EamA-like transporter family VV_RS00665 PF00582 Universal stress protein family VV_RS00670 PF00210 Ferritin-like domain VV_RS00675 PF10625 Universal stress protein B (UspB) VV_RS00690 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VV_RS00695 PF02602 Uroporphyrinogen-III synthase HemD VV_RS00700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VV_RS00700 PF03900 Porphobilinogen deaminase, C-terminal domain VV_RS00705 PF12633 Adenylate cyclase NT domain VV_RS00705 PF01295 Adenylate cyclase, class-I VV_RS00710 PF01491 Frataxin-like domain VV_RS00720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VV_RS00720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VV_RS00725 PF01678 Diaminopimelate epimerase VV_RS00735 PF02899 Phage integrase, N-terminal SAM-like domain VV_RS00735 PF00589 Phage integrase family VV_RS00740 PF13419 Haloacid dehalogenase-like hydrolase VV_RS00745 PF00563 EAL domain VV_RS00745 PF10442 FIST C domain VV_RS00745 PF00990 Diguanylate cyclase, GGDEF domain VV_RS00745 PF08495 FIST N domain VV_RS00750 PF03942 DTW domain VV_RS00770 PF12146 Serine aminopeptidase, S33 VV_RS00775 PF01810 LysE type translocator VV_RS00780 PF08668 HDOD domain VV_RS00780 PF00563 EAL domain VV_RS00785 PF01022 Bacterial regulatory protein, arsR family VV_RS00790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV_RS00790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV_RS00830 PF01914 MarC family integral membrane protein VV_RS00845 PF02881 SRP54-type protein, helical bundle domain VV_RS00845 PF00448 SRP54-type protein, GTPase domain VV_RS00850 PF00005 ABC transporter VV_RS00855 PF18075 FtsX extracellular domain VV_RS00860 PF04542 Sigma-70 region 2 VV_RS00860 PF00140 Sigma-70 factor, region 1.2 VV_RS00860 PF04545 Sigma-70, region 4 VV_RS00865 PF00581 Rhodanese-like domain VV_RS00870 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VV_RS00870 PF01694 Rhomboid family VV_RS00875 PF03748 Flagellar basal body-associated protein FliL VV_RS00880 PF04345 Chorismate lyase VV_RS00885 PF01040 UbiA prenyltransferase family VV_RS00890 PF01553 Acyltransferase VV_RS00895 PF00717 Peptidase S24-like VV_RS00895 PF01726 LexA DNA binding domain VV_RS00905 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS00905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV_RS00910 PF00440 Bacterial regulatory proteins, tetR family VV_RS00920 PF05958 tRNA (Uracil-5-)-methyltransferase VV_RS00950 PF13411 MerR HTH family regulatory protein VV_RS00970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV_RS00970 PF00529 HlyD membrane-fusion protein of T1SS VV_RS00990 PF09308 LuxQ, periplasmic VV_RS00990 PF00072 Response regulator receiver domain VV_RS00990 PF00512 His Kinase A (phospho-acceptor) domain VV_RS00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS01040 PF13737 Transposase DDE domain VV_RS01050 PF16123 Hydroxyacylglutathione hydrolase C-terminus VV_RS01050 PF00753 Metallo-beta-lactamase superfamily VV_RS01065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV_RS01075 PF00465 Iron-containing alcohol dehydrogenase VV_RS01080 PF02368 Bacterial Ig-like domain (group 2) VV_RS01080 PF11999 Protein of unknown function (DUF3494) VV_RS01090 PF13737 Transposase DDE domain VV_RS01100 PF10544 T5orf172 domain VV_RS01115 PF07715 TonB-dependent Receptor Plug Domain VV_RS01115 PF00593 TonB dependent receptor VV_RS01125 PF01177 Asp/Glu/Hydantoin racemase VV_RS01180 PF13358 DDE superfamily endonuclease VV_RS01195 PF02646 RmuC family VV_RS01200 PF01209 ubiE/COQ5 methyltransferase family VV_RS01205 PF02036 SCP-2 sterol transfer family VV_RS01210 PF03109 ABC1 family VV_RS01215 PF02416 mttA/Hcf106 family VV_RS01220 PF02416 mttA/Hcf106 family VV_RS01225 PF00902 Sec-independent protein translocase protein (TatC) VV_RS01230 PF01026 TatD related DNase VV_RS01235 PF00490 Delta-aminolevulinic acid dehydratase VV_RS01240 PF00476 DNA polymerase family A VV_RS01240 PF01612 3'-5' exonuclease VV_RS01240 PF01367 5'-3' exonuclease, C-terminal SAM fold VV_RS01240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VV_RS01245 PF01926 50S ribosome-binding GTPase VV_RS01250 PF00034 Cytochrome c VV_RS01260 PF04220 Der GTPase activator (YihI) VV_RS01265 PF10675 Protein of unknown function (DUF2489) VV_RS01270 PF04055 Radical SAM superfamily VV_RS01270 PF06969 HemN C-terminal domain VV_RS01275 PF00563 EAL domain VV_RS01275 PF00990 Diguanylate cyclase, GGDEF domain VV_RS01275 PF03707 Bacterial signalling protein N terminal repeat VV_RS01275 PF13188 PAS domain VV_RS01280 PF02954 Bacterial regulatory protein, Fis family VV_RS01280 PF00072 Response regulator receiver domain VV_RS01280 PF00158 Sigma-54 interaction domain VV_RS01285 PF00512 His Kinase A (phospho-acceptor) domain VV_RS01285 PF00989 PAS fold VV_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS01295 PF00120 Glutamine synthetase, catalytic domain VV_RS01295 PF03951 Glutamine synthetase, beta-Grasp domain VV_RS01300 PF00679 Elongation factor G C-terminus VV_RS01300 PF00009 Elongation factor Tu GTP binding domain VV_RS01300 PF03144 Elongation factor Tu domain 2 VV_RS01315 PF03631 Virulence factor BrkB VV_RS01320 PF02580 D-Tyr-tRNA(Tyr) deacylase VV_RS01325 PF09500 Putative thioesterase (yiiD_Cterm) VV_RS01325 PF00583 Acetyltransferase (GNAT) family VV_RS01335 PF01293 Phosphoenolpyruvate carboxykinase VV_RS01340 PF01430 Hsp33 protein VV_RS01345 PF01479 S4 domain VV_RS01350 PF11356 Type II secretion system protein C VV_RS01355 PF00263 Bacterial type II and III secretion system protein VV_RS01355 PF03958 Bacterial type II/III secretion system short domain VV_RS01360 PF00437 Type II/IV secretion system protein VV_RS01365 PF00482 Type II secretion system (T2SS), protein F VV_RS01370 PF07963 Prokaryotic N-terminal methylation motif VV_RS01370 PF08334 Type II secretion system (T2SS), protein G VV_RS01375 PF12019 Type II transport protein GspH VV_RS01380 PF02501 Type II secretion system (T2SS), protein I VV_RS01380 PF07963 Prokaryotic N-terminal methylation motif VV_RS01385 PF07963 Prokaryotic N-terminal methylation motif VV_RS01385 PF11612 Type II secretion system (T2SS), protein J VV_RS01390 PF03934 Type II secretion system (T2SS), protein K VV_RS01395 PF12693 GspL periplasmic domain VV_RS01395 PF05134 Type II secretion system (T2SS), protein L VV_RS01400 PF04612 Type II secretion system (T2SS), protein M VV_RS01405 PF01203 Type II secretion system (T2SS), protein N VV_RS01410 PF00459 Inositol monophosphatase family VV_RS01415 PF00293 NUDIX domain VV_RS01420 PF01521 Iron-sulphur cluster biosynthesis VV_RS01420 PF01106 NifU-like domain VV_RS01430 PF00561 alpha/beta hydrolase fold VV_RS01440 PF16921 Tex protein YqgF-like domain VV_RS01440 PF09371 Tex-like protein N-terminal domain VV_RS01440 PF17674 HHH domain VV_RS01440 PF00575 S1 RNA binding domain VV_RS01445 PF03449 Transcription elongation factor, N-terminal VV_RS01445 PF01272 Transcription elongation factor, GreA/GreB, C-term VV_RS01450 PF00486 Transcriptional regulatory protein, C terminal VV_RS01450 PF00072 Response regulator receiver domain VV_RS01455 PF00672 HAMP domain VV_RS01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS01455 PF00512 His Kinase A (phospho-acceptor) domain VV_RS01460 PF00860 Permease family VV_RS01465 PF00270 DEAD/DEAH box helicase VV_RS01465 PF00271 Helicase conserved C-terminal domain VV_RS01465 PF17191 RecG wedge domain VV_RS01470 PF00588 SpoU rRNA Methylase family VV_RS01470 PF12105 SpoU, rRNA methylase, C-terminal VV_RS01475 PF04607 Region found in RelA / SpoT proteins VV_RS01475 PF02824 TGS domain VV_RS01475 PF13291 ACT domain VV_RS01480 PF01192 RNA polymerase Rpb6 VV_RS01485 PF00625 Guanylate kinase VV_RS01500 PF02472 Biopolymer transport protein ExbD/TolR VV_RS01505 PF01618 MotA/TolQ/ExbB proton channel family VV_RS01510 PF01618 MotA/TolQ/ExbB proton channel family VV_RS01520 PF07715 TonB-dependent Receptor Plug Domain VV_RS01520 PF00593 TonB dependent receptor VV_RS01525 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS01530 PF12911 N-terminal TM domain of oligopeptide transport permease C VV_RS01535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV_RS01540 PF00005 ABC transporter VV_RS01540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS01545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS01545 PF00005 ABC transporter VV_RS01560 PF00892 EamA-like transporter family VV_RS01585 PF04851 Type III restriction enzyme, res subunit VV_RS01585 PF08463 EcoEI R protein C-terminal VV_RS01585 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VV_RS01585 PF00271 Helicase conserved C-terminal domain VV_RS01590 PF02384 N-6 DNA Methylase VV_RS01590 PF12161 HsdM N-terminal domain VV_RS01615 PF06114 IrrE N-terminal-like domain VV_RS01635 PF03755 YicC-like family, N-terminal region VV_RS01635 PF08340 Domain of unknown function (DUF1732) VV_RS01640 PF01138 3' exoribonuclease family, domain 1 VV_RS01640 PF03725 3' exoribonuclease family, domain 2 VV_RS01645 PF00156 Phosphoribosyl transferase domain VV_RS01650 PF03279 Bacterial lipid A biosynthesis acyltransferase VV_RS01655 PF00440 Bacterial regulatory proteins, tetR family VV_RS01660 PF02441 Flavoprotein VV_RS01660 PF04127 DNA / pantothenate metabolism flavoprotein VV_RS01665 PF02743 Cache domain VV_RS01665 PF00672 HAMP domain VV_RS01665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS01670 PF04002 RadC-like JAB domain VV_RS01675 PF00830 Ribosomal L28 family VV_RS01680 PF00471 Ribosomal protein L33 VV_RS01690 PF06827 Zinc finger found in FPG and IleRS VV_RS01690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VV_RS01690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VV_RS01700 PF01467 Cytidylyltransferase-like VV_RS01705 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV_RS01710 PF00535 Glycosyl transferase family 2 VV_RS01715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV_RS01720 PF01219 Prokaryotic diacylglycerol kinase VV_RS01730 PF00884 Sulfatase VV_RS01730 PF11893 Domain of unknown function (DUF3413) VV_RS01735 PF00535 Glycosyl transferase family 2 VV_RS01740 PF16363 GDP-mannose 4,6 dehydratase VV_RS01745 PF00483 Nucleotidyl transferase VV_RS01750 PF04321 RmlD substrate binding domain VV_RS01755 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VV_RS01765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VV_RS01780 PF02719 Polysaccharide biosynthesis protein VV_RS01785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VV_RS01790 PF02350 UDP-N-acetylglucosamine 2-epimerase VV_RS01795 PF03102 NeuB family VV_RS01795 PF08666 SAF domain VV_RS01800 PF12464 Maltose acetyltransferase VV_RS01800 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS01805 PF00483 Nucleotidyl transferase VV_RS01810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VV_RS01810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VV_RS01815 PF02348 Cytidylyltransferase VV_RS01825 PF00117 Glutamine amidotransferase class-I VV_RS01830 PF00977 Histidine biosynthesis protein VV_RS01845 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS01845 PF12464 Maltose acetyltransferase VV_RS01855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VV_RS01860 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VV_RS01865 PF03279 Bacterial lipid A biosynthesis acyltransferase VV_RS01870 PF01370 NAD dependent epimerase/dehydratase family VV_RS01875 PF06082 Exopolysaccharide biosynthesis protein YbjH VV_RS01885 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VV_RS01920 PF02563 Polysaccharide biosynthesis/export protein VV_RS01920 PF10531 SLBB domain VV_RS01920 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VV_RS01930 PF01451 Low molecular weight phosphotyrosine protein phosphatase VV_RS01935 PF02706 Chain length determinant protein VV_RS01935 PF13614 AAA domain VV_RS01935 PF13807 G-rich domain on putative tyrosine kinase VV_RS01940 PF02350 UDP-N-acetylglucosamine 2-epimerase VV_RS01945 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VV_RS01945 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VV_RS01945 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VV_RS01970 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS01980 PF00534 Glycosyl transferases group 1 VV_RS01985 PF16363 GDP-mannose 4,6 dehydratase VV_RS01990 PF01370 NAD dependent epimerase/dehydratase family VV_RS01995 PF00293 NUDIX domain VV_RS02000 PF01050 Mannose-6-phosphate isomerase VV_RS02000 PF00483 Nucleotidyl transferase VV_RS02005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV_RS02005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV_RS02005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV_RS02005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV_RS02015 PF00117 Glutamine amidotransferase class-I VV_RS02020 PF00977 Histidine biosynthesis protein VV_RS02025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VV_RS02025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VV_RS02040 PF02397 Bacterial sugar transferase VV_RS02050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VV_RS02055 PF02719 Polysaccharide biosynthesis protein VV_RS02060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VV_RS02060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VV_RS02060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VV_RS02065 PF00483 Nucleotidyl transferase VV_RS02070 PF00665 Integrase core domain VV_RS02075 PF01695 IstB-like ATP binding protein VV_RS02085 PF10996 Beta-Casp domain VV_RS02085 PF00753 Metallo-beta-lactamase superfamily VV_RS02085 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VV_RS02095 PF00338 Ribosomal protein S10p/S20e VV_RS02100 PF00297 Ribosomal protein L3 VV_RS02105 PF00573 Ribosomal protein L4/L1 family VV_RS02110 PF00276 Ribosomal protein L23 VV_RS02115 PF03947 Ribosomal Proteins L2, C-terminal domain VV_RS02115 PF00181 Ribosomal Proteins L2, RNA binding domain VV_RS02120 PF00203 Ribosomal protein S19 VV_RS02125 PF00237 Ribosomal protein L22p/L17e VV_RS02130 PF00189 Ribosomal protein S3, C-terminal domain VV_RS02130 PF07650 KH domain VV_RS02135 PF00252 Ribosomal protein L16p/L10e VV_RS02140 PF00831 Ribosomal L29 protein VV_RS02145 PF00366 Ribosomal protein S17 VV_RS02150 PF00238 Ribosomal protein L14p/L23e VV_RS02155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VV_RS02155 PF00467 KOW motif VV_RS02160 PF00281 Ribosomal protein L5 VV_RS02160 PF00673 ribosomal L5P family C-terminus VV_RS02165 PF00253 Ribosomal protein S14p/S29e VV_RS02170 PF00410 Ribosomal protein S8 VV_RS02175 PF00347 Ribosomal protein L6 VV_RS02180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VV_RS02185 PF03719 Ribosomal protein S5, C-terminal domain VV_RS02185 PF00333 Ribosomal protein S5, N-terminal domain VV_RS02190 PF00327 Ribosomal protein L30p/L7e VV_RS02195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VV_RS02200 PF00344 SecY translocase VV_RS02205 PF00444 Ribosomal protein L36 VV_RS02210 PF00416 Ribosomal protein S13/S18 VV_RS02215 PF00411 Ribosomal protein S11 VV_RS02220 PF00163 Ribosomal protein S4/S9 N-terminal domain VV_RS02220 PF01479 S4 domain VV_RS02225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VV_RS02225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VV_RS02225 PF01000 RNA polymerase Rpb3/RpoA insert domain VV_RS02230 PF01196 Ribosomal protein L17 VV_RS02240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VV_RS02240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV_RS02245 PF04225 Opacity-associated protein A LysM-like domain VV_RS02245 PF08525 Opacity-associated protein A N-terminal motif VV_RS02255 PF13673 Acetyltransferase (GNAT) domain VV_RS02265 PF00149 Calcineurin-like phosphoesterase VV_RS02265 PF02872 5'-nucleotidase, C-terminal domain VV_RS02270 PF10414 Sirohaem synthase dimerisation region VV_RS02270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV_RS02270 PF14824 Sirohaem biosynthesis protein central VV_RS02275 PF01507 Phosphoadenosine phosphosulfate reductase family VV_RS02280 PF00009 Elongation factor Tu GTP binding domain VV_RS02285 PF03600 Citrate transporter VV_RS02285 PF02080 TrkA-C domain VV_RS02310 PF12704 MacB-like periplasmic core domain VV_RS02310 PF00005 ABC transporter VV_RS02310 PF02687 FtsX-like permease family VV_RS02325 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VV_RS02335 PF01625 Peptide methionine sulfoxide reductase VV_RS02340 PF01103 Surface antigen VV_RS02340 PF17243 POTRA domain TamA domain 1 VV_RS02340 PF07244 Surface antigen variable number repeat VV_RS02345 PF04357 TamB, inner membrane protein subunit of TAM complex VV_RS02350 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VV_RS02360 PF00719 Inorganic pyrophosphatase VV_RS02365 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VV_RS02370 PF08245 Mur ligase middle domain VV_RS02370 PF02875 Mur ligase family, glutamate ligase domain VV_RS02370 PF01225 Mur ligase family, catalytic domain VV_RS02375 PF02441 Flavoprotein VV_RS02385 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS02390 PF00005 ABC transporter VV_RS02395 PF04751 Protein of unknown function (DUF615) VV_RS02400 PF01523 Putative modulator of DNA gyrase VV_RS02405 PF00571 CBS domain VV_RS02405 PF01769 Divalent cation transporter VV_RS02405 PF03448 MgtE intracellular N domain VV_RS02410 PF00381 PTS HPr component phosphorylation site VV_RS02415 PF03668 P-loop ATPase protein family VV_RS02420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV_RS02425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VV_RS02430 PF00309 Sigma-54 factor, Activator interacting domain (AID) VV_RS02430 PF04963 Sigma-54 factor, core binding domain VV_RS02430 PF04552 Sigma-54, DNA binding domain VV_RS02435 PF00005 ABC transporter VV_RS02435 PF12399 Branched-chain amino acid ATP-binding cassette transporter VV_RS02440 PF03968 OstA-like protein VV_RS02455 PF01380 SIS domain VV_RS02455 PF00571 CBS domain VV_RS02460 PF01699 Sodium/calcium exchanger protein VV_RS02465 PF00005 ABC transporter VV_RS02470 PF02405 Permease MlaE VV_RS02475 PF02470 MlaD protein VV_RS02480 PF05494 MlaC protein VV_RS02490 PF01722 BolA-like protein VV_RS02495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VV_RS02500 PF01553 Acyltransferase VV_RS02505 PF00582 Universal stress protein family VV_RS02515 PF16868 NMT1-like family VV_RS02520 PF01316 Arginine repressor, DNA binding domain VV_RS02520 PF02863 Arginine repressor, C-terminal domain VV_RS02525 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VV_RS02525 PF00056 lactate/malate dehydrogenase, NAD binding domain VV_RS02535 PF00829 Ribosomal prokaryotic L21 protein VV_RS02540 PF01016 Ribosomal L27 protein VV_RS02545 PF01926 50S ribosome-binding GTPase VV_RS02545 PF01018 GTP1/OBG VV_RS02550 PF06738 Putative threonine/serine exporter VV_RS02555 PF12821 Threonine/Serine exporter, ThrE VV_RS02560 PF00186 Dihydrofolate reductase VV_RS02565 PF00149 Calcineurin-like phosphoesterase VV_RS02570 PF04379 ApaG domain VV_RS02575 PF00398 Ribosomal RNA adenine dimethylase VV_RS02580 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VV_RS02585 PF09312 SurA N-terminal domain VV_RS02585 PF00639 PPIC-type PPIASE domain VV_RS02590 PF03968 OstA-like protein VV_RS02590 PF04453 LPS transport system D VV_RS02595 PF05099 Tellurite resistance protein TerB VV_RS02595 PF00226 DnaJ domain VV_RS02605 PF00694 Aconitase C-terminal domain VV_RS02610 PF00330 Aconitase family (aconitate hydratase) VV_RS02615 PF00180 Isocitrate/isopropylmalate dehydrogenase VV_RS02620 PF00682 HMGL-like VV_RS02620 PF08502 LeuA allosteric (dimerisation) domain VV_RS02630 PF01569 PAP2 superfamily VV_RS02640 PF03466 LysR substrate binding domain VV_RS02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS02645 PF00501 AMP-binding enzyme VV_RS02650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV_RS02650 PF00205 Thiamine pyrophosphate enzyme, central domain VV_RS02650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV_RS02655 PF10369 Small subunit of acetolactate synthase VV_RS02660 PF07694 5TMR of 5TMR-LYT VV_RS02660 PF00990 Diguanylate cyclase, GGDEF domain VV_RS02675 PF02887 Pyruvate kinase, alpha/beta domain VV_RS02675 PF00224 Pyruvate kinase, barrel domain VV_RS02680 PF08220 DeoR-like helix-turn-helix domain VV_RS02680 PF00455 DeoR C terminal sensor domain VV_RS02685 PF01380 SIS domain VV_RS02690 PF05068 Mannitol repressor VV_RS02695 PF01232 Mannitol dehydrogenase Rossmann domain VV_RS02695 PF08125 Mannitol dehydrogenase C-terminal domain VV_RS02700 PF02378 Phosphotransferase system, EIIC VV_RS02700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VV_RS02700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV_RS02705 PF03480 Bacterial extracellular solute-binding protein, family 7 VV_RS02750 PF00075 RNase H VV_RS02785 PF04002 RadC-like JAB domain VV_RS02790 PF08220 DeoR-like helix-turn-helix domain VV_RS02790 PF00455 DeoR C terminal sensor domain VV_RS02795 PF01791 DeoC/LacD family aldolase VV_RS02800 PF00294 pfkB family carbohydrate kinase VV_RS02805 PF07690 Major Facilitator Superfamily VV_RS02815 PF01609 Transposase DDE domain VV_RS02815 PF05598 Transposase domain (DUF772) VV_RS02825 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VV_RS02825 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VV_RS02825 PF02278 Polysaccharide lyase family 8, super-sandwich domain VV_RS02830 PF02278 Polysaccharide lyase family 8, super-sandwich domain VV_RS02830 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VV_RS02830 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VV_RS02840 PF08220 DeoR-like helix-turn-helix domain VV_RS02840 PF00455 DeoR C terminal sensor domain VV_RS02845 PF03830 PTS system sorbose subfamily IIB component VV_RS02850 PF03609 PTS system sorbose-specific iic component VV_RS02855 PF03613 PTS system mannose/fructose/sorbose family IID component VV_RS02860 PF03610 PTS system fructose IIA component VV_RS02860 PF03830 PTS system sorbose subfamily IIB component VV_RS02865 PF07470 Glycosyl Hydrolase Family 88 VV_RS02885 PF00665 Integrase core domain VV_RS02900 PF03050 Transposase IS66 family VV_RS02905 PF09339 IclR helix-turn-helix domain VV_RS02905 PF01614 Bacterial transcriptional regulator VV_RS02915 PF10688 Bacterial inner membrane protein VV_RS02920 PF00294 pfkB family carbohydrate kinase VV_RS02925 PF01081 KDPG and KHG aldolase VV_RS02930 PF02281 Transposase Tn5 dimerisation domain VV_RS02930 PF14706 Transposase DNA-binding VV_RS02930 PF01609 Transposase DDE domain VV_RS02935 PF12759 InsA C-terminal domain VV_RS02935 PF03811 InsA N-terminal domain VV_RS02940 PF03400 IS1 transposase VV_RS02945 PF13356 Arm DNA-binding domain VV_RS02945 PF00589 Phage integrase family VV_RS02955 PF00140 Sigma-70 factor, region 1.2 VV_RS02955 PF04546 Sigma-70, non-essential region VV_RS02955 PF04542 Sigma-70 region 2 VV_RS02955 PF04539 Sigma-70 region 3 VV_RS02955 PF04545 Sigma-70, region 4 VV_RS02955 PF03979 Sigma-70 factor, region 1.1 VV_RS02960 PF01807 CHC2 zinc finger VV_RS02960 PF08275 DNA primase catalytic core, N-terminal domain VV_RS02960 PF08278 DNA primase DnaG DnaB-binding VV_RS02960 PF10410 DnaB-helicase binding domain of primase VV_RS02965 PF09424 Yqey-like protein VV_RS02970 PF01165 Ribosomal protein S21 VV_RS02975 PF00814 Glycoprotease family VV_RS02980 PF12697 Alpha/beta hydrolase family VV_RS02985 PF02660 Glycerol-3-phosphate acyltransferase VV_RS02990 PF02152 Dihydroneopterin aldolase VV_RS02995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VV_RS03000 PF02673 Bacitracin resistance protein BacA VV_RS03005 PF12627 Probable RNA and SrmB- binding site of polymerase A VV_RS03005 PF01966 HD domain VV_RS03005 PF01743 Poly A polymerase head domain VV_RS03010 PF01471 Putative peptidoglycan binding domain VV_RS03010 PF13401 AAA domain VV_RS03015 PF08239 Bacterial SH3 domain VV_RS03020 PF01384 Phosphate transporter family VV_RS03025 PF01865 Protein of unknown function DUF47 VV_RS03030 PF01928 CYTH domain VV_RS03035 PF07885 Ion channel VV_RS03040 PF00672 HAMP domain VV_RS03040 PF12729 Four helix bundle sensory module for signal transduction VV_RS03040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS03045 PF08335 GlnD PII-uridylyltransferase VV_RS03045 PF03710 Glutamate-ammonia ligase adenylyltransferase VV_RS03050 PF01467 Cytidylyltransferase-like VV_RS03050 PF00294 pfkB family carbohydrate kinase VV_RS03055 PF02321 Outer membrane efflux protein VV_RS03060 PF00293 NUDIX domain VV_RS03065 PF06853 Protein of unknown function (DUF1249) VV_RS03070 PF00149 Calcineurin-like phosphoesterase VV_RS03075 PF05728 Uncharacterised protein family (UPF0227) VV_RS03080 PF00986 DNA gyrase B subunit, carboxyl terminus VV_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS03080 PF00204 DNA gyrase B VV_RS03080 PF01751 Toprim domain VV_RS03085 PF03989 DNA gyrase C-terminal domain, beta-propeller VV_RS03085 PF00521 DNA gyrase/topoisomerase IV, subunit A VV_RS03090 PF13180 PDZ domain VV_RS03095 PF00595 PDZ domain VV_RS03100 PF06295 Protein of unknown function (DUF1043) VV_RS03105 PF03969 AFG1-like ATPase VV_RS03110 PF00572 Ribosomal protein L13 VV_RS03115 PF00380 Ribosomal protein S9/S16 VV_RS03120 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VV_RS03120 PF00355 Rieske [2Fe-2S] domain VV_RS03125 PF00033 Cytochrome b/b6/petB VV_RS03125 PF00032 Cytochrome b(C-terminal)/b6/petD VV_RS03130 PF02167 Cytochrome C1 family VV_RS03135 PF00043 Glutathione S-transferase, C-terminal domain VV_RS03135 PF02798 Glutathione S-transferase, N-terminal domain VV_RS03140 PF04386 Stringent starvation protein B VV_RS03145 PF04972 BON domain VV_RS03150 PF13580 SIS domain VV_RS03155 PF02021 Uncharacterised protein family UPF0102 VV_RS03160 PF04348 LppC putative lipoprotein VV_RS03165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV_RS03170 PF01795 MraW methylase family VV_RS03175 PF04999 Cell division protein FtsL VV_RS03180 PF03717 Penicillin-binding Protein dimerisation domain VV_RS03180 PF00905 Penicillin binding protein transpeptidase domain VV_RS03185 PF08245 Mur ligase middle domain VV_RS03185 PF02875 Mur ligase family, glutamate ligase domain VV_RS03185 PF01225 Mur ligase family, catalytic domain VV_RS03190 PF08245 Mur ligase middle domain VV_RS03190 PF02875 Mur ligase family, glutamate ligase domain VV_RS03190 PF01225 Mur ligase family, catalytic domain VV_RS03195 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VV_RS03195 PF00953 Glycosyl transferase family 4 VV_RS03200 PF02875 Mur ligase family, glutamate ligase domain VV_RS03200 PF08245 Mur ligase middle domain VV_RS03205 PF01098 Cell cycle protein VV_RS03210 PF03033 Glycosyltransferase family 28 N-terminal domain VV_RS03210 PF04101 Glycosyltransferase family 28 C-terminal domain VV_RS03215 PF01225 Mur ligase family, catalytic domain VV_RS03215 PF02875 Mur ligase family, glutamate ligase domain VV_RS03215 PF08245 Mur ligase middle domain VV_RS03220 PF03799 Cell division protein FtsQ VV_RS03220 PF08478 POTRA domain, FtsQ-type VV_RS03225 PF02491 SHS2 domain inserted in FTSA VV_RS03230 PF00091 Tubulin/FtsZ family, GTPase domain VV_RS03230 PF12327 FtsZ family, C-terminal domain VV_RS03235 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VV_RS03245 PF07516 SecA Wing and Scaffold domain VV_RS03245 PF01043 SecA preprotein cross-linking domain VV_RS03245 PF02810 SEC-C motif VV_RS03245 PF07517 SecA DEAD-like domain VV_RS03250 PF00293 NUDIX domain VV_RS03255 PF01113 Dihydrodipicolinate reductase, N-terminus VV_RS03255 PF05173 Dihydrodipicolinate reductase, C-terminus VV_RS03260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VV_RS03260 PF00117 Glutamine amidotransferase class-I VV_RS03265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VV_RS03265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VV_RS03265 PF02142 MGS-like domain VV_RS03280 PF01925 Sulfite exporter TauE/SafE VV_RS03285 PF03466 LysR substrate binding domain VV_RS03285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS03290 PF03458 UPF0126 domain VV_RS03295 PF01497 Periplasmic binding protein VV_RS03300 PF03186 CobD/Cbib protein VV_RS03300 PF17113 Regulatory signalling modulator protein AmpE VV_RS03305 PF01048 Phosphorylase superfamily VV_RS03315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VV_RS03315 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS03320 PF01493 GXGXG motif VV_RS03320 PF01645 Conserved region in glutamate synthase VV_RS03320 PF00310 Glutamine amidotransferases class-II VV_RS03320 PF04898 Glutamate synthase central domain VV_RS03325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VV_RS03325 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS03330 PF01493 GXGXG motif VV_RS03330 PF01645 Conserved region in glutamate synthase VV_RS03330 PF00310 Glutamine amidotransferases class-II VV_RS03330 PF04898 Glutamate synthase central domain VV_RS03335 PF16199 Radical_SAM C-terminal domain VV_RS03335 PF04055 Radical SAM superfamily VV_RS03340 PF01590 GAF domain VV_RS03340 PF00360 Phytochrome region VV_RS03340 PF00990 Diguanylate cyclase, GGDEF domain VV_RS03340 PF00563 EAL domain VV_RS03345 PF18415 Histidine kinase receptor ArcB trans-membrane domain VV_RS03345 PF01627 Hpt domain VV_RS03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS03345 PF00989 PAS fold VV_RS03345 PF00072 Response regulator receiver domain VV_RS03345 PF00512 His Kinase A (phospho-acceptor) domain VV_RS03355 PF00486 Transcriptional regulatory protein, C terminal VV_RS03355 PF00072 Response regulator receiver domain VV_RS03365 PF03737 Aldolase/RraA VV_RS03375 PF00742 Homoserine dehydrogenase VV_RS03375 PF03447 Homoserine dehydrogenase, NAD binding domain VV_RS03375 PF13840 ACT domain VV_RS03375 PF01842 ACT domain VV_RS03375 PF00696 Amino acid kinase family VV_RS03380 PF00288 GHMP kinases N terminal domain VV_RS03380 PF08544 GHMP kinases C terminal VV_RS03385 PF00291 Pyridoxal-phosphate dependent enzyme VV_RS03385 PF14821 Threonine synthase N terminus VV_RS03390 PF01228 Glycine radical VV_RS03395 PF01261 Xylose isomerase-like TIM barrel VV_RS03400 PF03167 Uracil DNA glycosylase superfamily VV_RS03415 PF01235 Sodium:alanine symporter family VV_RS03420 PF03883 Peroxide stress protein YaaA VV_RS03425 PF00270 DEAD/DEAH box helicase VV_RS03425 PF00271 Helicase conserved C-terminal domain VV_RS03430 PF05175 Methyltransferase small domain VV_RS03435 PF05525 Branched-chain amino acid transport protein VV_RS03440 PF00258 Flavodoxin VV_RS03445 PF02899 Phage integrase, N-terminal SAM-like domain VV_RS03445 PF00589 Phage integrase family VV_RS03450 PF13098 Thioredoxin-like domain VV_RS03450 PF10411 Disulfide bond isomerase protein N-terminus VV_RS03455 PF01368 DHH family VV_RS03455 PF02272 DHHA1 domain VV_RS03455 PF17768 RecJ OB domain VV_RS03460 PF00472 RF-1 domain VV_RS03460 PF03462 PCRF domain VV_RS03465 PF00152 tRNA synthetases class II (D, K and N) VV_RS03465 PF01336 OB-fold nucleic acid binding domain VV_RS03470 PF02954 Bacterial regulatory protein, Fis family VV_RS03470 PF02830 V4R domain VV_RS03470 PF00158 Sigma-54 interaction domain VV_RS03470 PF06505 Activator of aromatic catabolism VV_RS03480 PF00248 Aldo/keto reductase family VV_RS03490 PF02976 DNA mismatch repair enzyme MutH VV_RS03495 PF00293 NUDIX domain VV_RS03500 PF02896 PEP-utilising enzyme, TIM barrel domain VV_RS03500 PF00391 PEP-utilising enzyme, mobile domain VV_RS03500 PF01590 GAF domain VV_RS03500 PF05524 PEP-utilising enzyme, N-terminal VV_RS03505 PF01925 Sulfite exporter TauE/SafE VV_RS03510 PF01790 Prolipoprotein diacylglyceryl transferase VV_RS03515 PF00303 Thymidylate synthase VV_RS03525 PF02690 Na+/Pi-cotransporter VV_RS03530 PF03466 LysR substrate binding domain VV_RS03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS03535 PF01022 Bacterial regulatory protein, arsR family VV_RS03540 PF01649 Ribosomal protein S20 VV_RS03545 PF03023 Lipid II flippase MurJ VV_RS03550 PF06574 FAD synthetase VV_RS03550 PF01687 Riboflavin kinase VV_RS03555 PF06827 Zinc finger found in FPG and IleRS VV_RS03555 PF08264 Anticodon-binding domain of tRNA VV_RS03555 PF00133 tRNA synthetases class I (I, L, M and V) VV_RS03560 PF01252 Signal peptidase (SPase) II VV_RS03565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV_RS03570 PF02401 LytB protein VV_RS03575 PF00072 Response regulator receiver domain VV_RS03575 PF04397 LytTr DNA-binding domain VV_RS03580 PF06580 Histidine kinase VV_RS03580 PF07694 5TMR of 5TMR-LYT VV_RS03585 PF02554 Carbon starvation protein CstA VV_RS03605 PF03702 Anhydro-N-acetylmuramic acid kinase VV_RS03610 PF00933 Glycosyl hydrolase family 3 N terminal domain VV_RS03615 PF00793 DAHP synthetase I family VV_RS03620 PF02153 Prephenate dehydrogenase VV_RS03620 PF01817 Chorismate mutase type II VV_RS03625 PF04225 Opacity-associated protein A LysM-like domain VV_RS03625 PF01551 Peptidase family M23 VV_RS03630 PF07238 PilZ domain VV_RS03635 PF12848 ABC transporter VV_RS03635 PF00005 ABC transporter VV_RS03640 PF01464 Transglycosylase SLT domain VV_RS03640 PF14718 Soluble lytic murein transglycosylase L domain VV_RS03645 PF01371 Trp repressor protein VV_RS03650 PF01931 Protein of unknown function DUF84 VV_RS03655 PF01817 Chorismate mutase type II VV_RS03655 PF00800 Prephenate dehydratase VV_RS03660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VV_RS03665 PF01609 Transposase DDE domain VV_RS03665 PF13006 Insertion element 4 transposase N-terminal VV_RS03670 PF13525 Outer membrane lipoprotein VV_RS03675 PF00849 RNA pseudouridylate synthase VV_RS03675 PF01479 S4 domain VV_RS03680 PF02578 Multi-copper polyphenol oxidoreductase laccase VV_RS03685 PF17871 AAA lid domain VV_RS03685 PF07724 AAA domain (Cdc48 subfamily) VV_RS03685 PF02861 Clp amino terminal domain, pathogenicity island component VV_RS03685 PF10431 C-terminal, D2-small domain, of ClpB protein VV_RS03685 PF00004 ATPase family associated with various cellular activities (AAA) VV_RS03730 PF03411 Penicillin-insensitive murein endopeptidase VV_RS03735 PF00037 4Fe-4S binding domain VV_RS03740 PF01136 Peptidase family U32 VV_RS03740 PF16325 Peptidase family U32 C-terminal domain VV_RS03745 PF04381 Putative exonuclease, RdgC VV_RS03750 PF00072 Response regulator receiver domain VV_RS03750 PF00486 Transcriptional regulatory protein, C terminal VV_RS03755 PF00512 His Kinase A (phospho-acceptor) domain VV_RS03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS03755 PF00989 PAS fold VV_RS03755 PF11808 Phosphate regulon sensor protein PhoR VV_RS03760 PF12849 PBP superfamily domain VV_RS03765 PF02541 Ppx/GppA phosphatase family VV_RS03770 PF13090 Polyphosphate kinase C-terminal domain 2 VV_RS03770 PF13089 Polyphosphate kinase N-terminal domain VV_RS03770 PF17941 Polyphosphate kinase C-terminal domain 1 VV_RS03770 PF02503 Polyphosphate kinase middle domain VV_RS03775 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS03780 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS03785 PF00005 ABC transporter VV_RS03790 PF01895 PhoU domain VV_RS03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS03810 PF03466 LysR substrate binding domain VV_RS03815 PF03976 Polyphosphate kinase 2 (PPK2) VV_RS03820 PF03932 CutC family VV_RS03825 PF00578 AhpC/TSA family VV_RS03825 PF10417 C-terminal domain of 1-Cys peroxiredoxin VV_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS03830 PF03466 LysR substrate binding domain VV_RS03835 PF01274 Malate synthase VV_RS03840 PF00463 Isocitrate lyase family VV_RS03845 PF00571 CBS domain VV_RS03855 PF02547 Queuosine biosynthesis protein VV_RS03860 PF01702 Queuine tRNA-ribosyltransferase VV_RS03865 PF02699 Preprotein translocase subunit VV_RS03870 PF13721 SecD export protein N-terminal TM region VV_RS03870 PF02355 Protein export membrane protein VV_RS03870 PF07549 SecD/SecF GG Motif VV_RS03875 PF07549 SecD/SecF GG Motif VV_RS03875 PF02355 Protein export membrane protein VV_RS03885 PF00459 Inositol monophosphatase family VV_RS03890 PF00588 SpoU rRNA Methylase family VV_RS03895 PF02082 Transcriptional regulator VV_RS03900 PF00266 Aminotransferase class-V VV_RS03905 PF01592 NifU-like N terminal domain VV_RS03910 PF01521 Iron-sulphur cluster biosynthesis VV_RS03915 PF00226 DnaJ domain VV_RS03915 PF07743 HSCB C-terminal oligomerisation domain VV_RS03920 PF00012 Hsp70 protein VV_RS03925 PF00111 2Fe-2S iron-sulfur cluster binding domain VV_RS03930 PF04384 Iron-sulphur cluster assembly VV_RS03935 PF12404 Peptidase VV_RS03935 PF00883 Cytosol aminopeptidase family, catalytic domain VV_RS03940 PF00334 Nucleoside diphosphate kinase VV_RS03945 PF04055 Radical SAM superfamily VV_RS03950 PF13464 Domain of unknown function (DUF4115) VV_RS03955 PF04551 GcpE protein VV_RS03960 PF13393 Histidyl-tRNA synthetase VV_RS03960 PF03129 Anticodon binding domain VV_RS03965 PF09976 Tetratricopeptide repeat-like domain VV_RS03970 PF13360 PQQ-like domain VV_RS03975 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VV_RS03975 PF01926 50S ribosome-binding GTPase VV_RS03985 PF00990 Diguanylate cyclase, GGDEF domain VV_RS03985 PF13185 GAF domain VV_RS03995 PF02601 Exonuclease VII, large subunit VV_RS03995 PF13742 OB-fold nucleic acid binding domain VV_RS04000 PF00571 CBS domain VV_RS04000 PF00478 IMP dehydrogenase / GMP reductase domain VV_RS04005 PF00958 GMP synthase C terminal domain VV_RS04005 PF02540 NAD synthase VV_RS04005 PF00117 Glutamine amidotransferase class-I VV_RS04010 PF00704 Glycosyl hydrolases family 18 VV_RS04010 PF06483 Chitinase C VV_RS04015 PF01184 GPR1/FUN34/yaaH family VV_RS04020 PF01235 Sodium:alanine symporter family VV_RS04025 PF01266 FAD dependent oxidoreductase VV_RS04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS04030 PF03466 LysR substrate binding domain VV_RS04035 PF07885 Ion channel VV_RS04040 PF02028 BCCT, betaine/carnitine/choline family transporter VV_RS04050 PF01300 Telomere recombination VV_RS04050 PF03481 Putative GTP-binding controlling metal-binding VV_RS04130 PF00075 RNase H VV_RS04145 PF04002 RadC-like JAB domain VV_RS04160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VV_RS04160 PF18766 SWI2/SNF2 ATPase VV_RS04160 PF12008 Type I restriction and modification enzyme - subunit R C terminal VV_RS04175 PF02384 N-6 DNA Methylase VV_RS04175 PF12161 HsdM N-terminal domain VV_RS04180 PF00589 Phage integrase family VV_RS04180 PF13356 Arm DNA-binding domain VV_RS04185 PF01668 SmpB protein VV_RS04190 PF03364 Polyketide cyclase / dehydrase and lipid transport VV_RS04195 PF03658 RnfH family Ubiquitin VV_RS04200 PF04355 SmpA / OmlA family VV_RS04210 PF01513 ATP-NAD kinase VV_RS04215 PF01025 GrpE VV_RS04220 PF00375 Sodium:dicarboxylate symporter family VV_RS04245 PF00012 Hsp70 protein VV_RS04250 PF00226 DnaJ domain VV_RS04250 PF00684 DnaJ central domain VV_RS04250 PF01556 DnaJ C terminal domain VV_RS04255 PF00114 Pilin (bacterial filament) VV_RS04255 PF07963 Prokaryotic N-terminal methylation motif VV_RS04280 PF03806 AbgT putative transporter family VV_RS04285 PF00756 Putative esterase VV_RS04290 PF08240 Alcohol dehydrogenase GroES-like domain VV_RS04290 PF00107 Zinc-binding dehydrogenase VV_RS04295 PF03466 LysR substrate binding domain VV_RS04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS04300 PF14437 MafB19-like deaminase VV_RS04305 PF01464 Transglycosylase SLT domain VV_RS04305 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV_RS04310 PF02769 AIR synthase related protein, C-terminal domain VV_RS04310 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VV_RS04310 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VV_RS04335 PF01546 Peptidase family M20/M25/M40 VV_RS04335 PF07687 Peptidase dimerisation domain VV_RS04345 PF00156 Phosphoribosyl transferase domain VV_RS04350 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VV_RS04355 PF07417 Sigma factor-binding transcriptional regulator Crl VV_RS04360 PF00696 Amino acid kinase family VV_RS04360 PF01472 PUA domain VV_RS04365 PF00171 Aldehyde dehydrogenase family VV_RS04370 PF03477 ATP cone domain VV_RS04375 PF01872 RibD C-terminal domain VV_RS04375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV_RS04380 PF00677 Lumazine binding domain VV_RS04385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VV_RS04385 PF00925 GTP cyclohydrolase II VV_RS04390 PF00885 6,7-dimethyl-8-ribityllumazine synthase VV_RS04395 PF01029 NusB family VV_RS04400 PF00586 AIR synthase related protein, N-terminal domain VV_RS04400 PF02769 AIR synthase related protein, C-terminal domain VV_RS04405 PF04608 Phosphatidylglycerophosphatase A VV_RS04410 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VV_RS04410 PF02779 Transketolase, pyrimidine binding domain VV_RS04410 PF02780 Transketolase, C-terminal domain VV_RS04415 PF00348 Polyprenyl synthetase VV_RS04420 PF02609 Exonuclease VII small subunit VV_RS04425 PF01618 MotA/TolQ/ExbB proton channel family VV_RS04430 PF00691 OmpA family VV_RS04430 PF13677 Membrane MotB of proton-channel complex MotA/MotB VV_RS04435 PF02568 Thiamine biosynthesis protein (ThiI) VV_RS04435 PF02926 THUMP domain VV_RS04440 PF03466 LysR substrate binding domain VV_RS04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS04450 PF04241 Protein of unknown function (DUF423) VV_RS04455 PF01728 FtsJ-like methyltransferase VV_RS04455 PF18125 RlmM ferredoxin-like domain VV_RS04460 PF01223 DNA/RNA non-specific endonuclease VV_RS04465 PF01367 5'-3' exonuclease, C-terminal SAM fold VV_RS04465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VV_RS04470 PF11892 Domain of unknown function (DUF3412) VV_RS04470 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VV_RS04470 PF03641 Possible lysine decarboxylase VV_RS04475 PF00990 Diguanylate cyclase, GGDEF domain VV_RS04485 PF14489 QueF-like protein VV_RS04485 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VV_RS04490 PF07348 Syd protein (SUKH-2) VV_RS04495 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VV_RS04500 PF03180 NLPA lipoprotein VV_RS04505 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS04510 PF00005 ABC transporter VV_RS04510 PF09383 NIL domain VV_RS04520 PF00356 Bacterial regulatory proteins, lacI family VV_RS04525 PF00367 phosphotransferase system, EIIB VV_RS04525 PF02378 Phosphotransferase system, EIIC VV_RS04530 PF00128 Alpha amylase, catalytic domain VV_RS04530 PF16657 Maltogenic Amylase, C-terminal domain VV_RS04540 PF00464 Serine hydroxymethyltransferase VV_RS04550 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VV_RS04550 PF04055 Radical SAM superfamily VV_RS04555 PF03099 Biotin/lipoate A/B protein ligase family VV_RS04560 PF04359 Protein of unknown function (DUF493) VV_RS04565 PF07943 Penicillin-binding protein 5, C-terminal domain VV_RS04565 PF00768 D-alanyl-D-alanine carboxypeptidase VV_RS04570 PF03330 Lytic transglycolase VV_RS04570 PF05036 Sporulation related domain VV_RS04575 PF01098 Cell cycle protein VV_RS04580 PF00905 Penicillin binding protein transpeptidase domain VV_RS04580 PF03717 Penicillin-binding Protein dimerisation domain VV_RS04585 PF02590 Predicted SPOUT methyltransferase VV_RS04595 PF06144 DNA polymerase III, delta subunit VV_RS04595 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VV_RS04600 PF04390 Lipopolysaccharide-assembly VV_RS04605 PF13603 Leucyl-tRNA synthetase, Domain 2 VV_RS04605 PF00133 tRNA synthetases class I (I, L, M and V) VV_RS04605 PF08264 Anticodon-binding domain of tRNA VV_RS04610 PF07295 Zinc-ribbon containing domain VV_RS04615 PF00795 Carbon-nitrogen hydrolase VV_RS04620 PF03471 Transporter associated domain VV_RS04620 PF00571 CBS domain VV_RS04625 PF02130 Uncharacterized protein family UPF0054 VV_RS04630 PF02562 PhoH-like protein VV_RS04635 PF00919 Uncharacterized protein family UPF0004 VV_RS04635 PF01938 TRAM domain VV_RS04635 PF04055 Radical SAM superfamily VV_RS04640 PF01494 FAD binding domain VV_RS04720 PF01926 50S ribosome-binding GTPase VV_RS04720 PF06071 Protein of unknown function (DUF933) VV_RS04725 PF01195 Peptidyl-tRNA hydrolase VV_RS04730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VV_RS04730 PF14572 Phosphoribosyl synthetase-associated domain VV_RS04735 PF00288 GHMP kinases N terminal domain VV_RS04735 PF08544 GHMP kinases C terminal VV_RS04740 PF03550 Outer membrane lipoprotein LolB VV_RS04745 PF01488 Shikimate / quinate 5-dehydrogenase VV_RS04745 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VV_RS04745 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VV_RS04750 PF03462 PCRF domain VV_RS04750 PF00472 RF-1 domain VV_RS04755 PF13847 Methyltransferase domain VV_RS04755 PF17827 PrmC N-terminal domain VV_RS04760 PF04247 Invasion gene expression up-regulator, SirB VV_RS04765 PF13369 Transglutaminase-like superfamily VV_RS04770 PF00793 DAHP synthetase I family VV_RS04775 PF00149 Calcineurin-like phosphoesterase VV_RS04775 PF02872 5'-nucleotidase, C-terminal domain VV_RS04780 PF04073 Aminoacyl-tRNA editing domain VV_RS04785 PF01479 S4 domain VV_RS04785 PF00849 RNA pseudouridylate synthase VV_RS04790 PF01713 Smr domain VV_RS04805 PF01963 TraB family VV_RS04810 PF02838 Glycosyl hydrolase family 20, domain 2 VV_RS04810 PF00728 Glycosyl hydrolase family 20, catalytic domain VV_RS04810 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VV_RS04810 PF03173 Putative carbohydrate binding domain VV_RS04820 PF00403 Heavy-metal-associated domain VV_RS04825 PF13609 Gram-negative porin VV_RS04830 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV_RS04835 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV_RS04880 PF00072 Response regulator receiver domain VV_RS04880 PF01584 CheW-like domain VV_RS04885 PF01739 CheR methyltransferase, SAM binding domain VV_RS04885 PF03705 CheR methyltransferase, all-alpha domain VV_RS04890 PF00460 Flagella basal body rod protein VV_RS04895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV_RS04895 PF00460 Flagella basal body rod protein VV_RS04900 PF03963 Flagellar hook capping protein - N-terminal region VV_RS04900 PF13861 FlgD Tudor-like domain VV_RS04900 PF13860 FlgD Ig-like domain VV_RS04905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV_RS04905 PF07559 Flagellar basal body protein FlaE VV_RS04905 PF00460 Flagella basal body rod protein VV_RS04910 PF00460 Flagella basal body rod protein VV_RS04910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV_RS04915 PF00460 Flagella basal body rod protein VV_RS04915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV_RS04920 PF02107 Flagellar L-ring protein VV_RS04925 PF02119 Flagellar P-ring protein VV_RS04930 PF10135 Rod binding protein VV_RS04930 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VV_RS04935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VV_RS04935 PF07196 Flagellin hook IN motif VV_RS04940 PF00669 Bacterial flagellin N-terminal helical region VV_RS04945 PF00669 Bacterial flagellin N-terminal helical region VV_RS04945 PF00700 Bacterial flagellin C-terminal helical region VV_RS04945 PF07196 Flagellin hook IN motif VV_RS04955 PF07196 Flagellin hook IN motif VV_RS04955 PF00669 Bacterial flagellin N-terminal helical region VV_RS04955 PF00700 Bacterial flagellin C-terminal helical region VV_RS04960 PF00700 Bacterial flagellin C-terminal helical region VV_RS04960 PF07196 Flagellin hook IN motif VV_RS04960 PF00669 Bacterial flagellin N-terminal helical region VV_RS04965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VV_RS04970 PF05524 PEP-utilising enzyme, N-terminal VV_RS04970 PF00391 PEP-utilising enzyme, mobile domain VV_RS04970 PF02896 PEP-utilising enzyme, TIM barrel domain VV_RS04975 PF00381 PTS HPr component phosphorylation site VV_RS04980 PF00291 Pyridoxal-phosphate dependent enzyme VV_RS04990 PF04354 ZipA, C-terminal FtsZ-binding domain VV_RS04995 PF01653 NAD-dependent DNA ligase adenylation domain VV_RS04995 PF12826 Helix-hairpin-helix motif VV_RS04995 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VV_RS04995 PF00533 BRCA1 C Terminus (BRCT) domain VV_RS04995 PF03120 NAD-dependent DNA ligase OB-fold domain VV_RS05000 PF13609 Gram-negative porin VV_RS05005 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV_RS05015 PF16200 C-terminal region of band_7 VV_RS05015 PF01145 SPFH domain / Band 7 family VV_RS05020 PF00085 Thioredoxin VV_RS05025 PF00106 short chain dehydrogenase VV_RS05030 PF08338 Domain of unknown function (DUF1731) VV_RS05030 PF01370 NAD dependent epimerase/dehydratase family VV_RS05035 PF07556 Protein of unknown function (DUF1538) VV_RS05040 PF07556 Protein of unknown function (DUF1538) VV_RS05055 PF12850 Calcineurin-like phosphoesterase superfamily domain VV_RS05070 PF17323 Trans-membrane regulatory protein ToxS VV_RS05075 PF00486 Transcriptional regulatory protein, C terminal VV_RS05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS05080 PF00183 Hsp90 protein VV_RS05085 PF05191 Adenylate kinase, active site lid VV_RS05090 PF00762 Ferrochelatase VV_RS05095 PF17200 Single Cache domain 2 VV_RS05095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS05095 PF00672 HAMP domain VV_RS05100 PF00854 POT family VV_RS05110 PF13537 Glutamine amidotransferase domain VV_RS05110 PF00733 Asparagine synthase VV_RS05115 PF00999 Sodium/hydrogen exchanger family VV_RS05115 PF02254 TrkA-N domain VV_RS05120 PF00480 ROK family VV_RS05120 PF01047 MarR family VV_RS05125 PF01979 Amidohydrolase family VV_RS05130 PF02378 Phosphotransferase system, EIIC VV_RS05130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VV_RS05130 PF00367 phosphotransferase system, EIIB VV_RS05135 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VV_RS05135 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV_RS05140 PF01475 Ferric uptake regulator family VV_RS05150 PF00258 Flavodoxin VV_RS05160 PF12697 Alpha/beta hydrolase family VV_RS05165 PF17206 SeqA protein N-terminal domain VV_RS05165 PF03925 SeqA protein C-terminal domain VV_RS05170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV_RS05170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV_RS05170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV_RS05170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV_RS05175 PF08348 YheO-like PAS domain VV_RS05175 PF13309 HTH domain VV_RS05180 PF01042 Endoribonuclease L-PSP VV_RS05185 PF00375 Sodium:dicarboxylate symporter family VV_RS05190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV_RS05190 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS05200 PF01784 NIF3 (NGG1p interacting factor 3) VV_RS05205 PF00285 Citrate synthase, C-terminal domain VV_RS05210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VV_RS05215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VV_RS05220 PF00890 FAD binding domain VV_RS05220 PF02910 Fumarate reductase flavoprotein C-term VV_RS05225 PF13085 2Fe-2S iron-sulfur cluster binding domain VV_RS05230 PF00676 Dehydrogenase E1 component VV_RS05230 PF02779 Transketolase, pyrimidine binding domain VV_RS05230 PF16870 2-oxoglutarate dehydrogenase C-terminal VV_RS05230 PF16078 2-oxoglutarate dehydrogenase N-terminus VV_RS05235 PF00364 Biotin-requiring enzyme VV_RS05235 PF02817 e3 binding domain VV_RS05235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VV_RS05240 PF00549 CoA-ligase VV_RS05240 PF08442 ATP-grasp domain VV_RS05245 PF02629 CoA binding domain VV_RS05245 PF00549 CoA-ligase VV_RS05250 PF00950 ABC 3 transport family VV_RS05255 PF00005 ABC transporter VV_RS05260 PF01297 Zinc-uptake complex component A periplasmic VV_RS05270 PF04023 FeoA domain VV_RS05275 PF07670 Nucleoside recognition VV_RS05275 PF02421 Ferrous iron transport protein B VV_RS05275 PF07664 Ferrous iron transport protein B C terminus VV_RS05290 PF00750 tRNA synthetases class I (R) VV_RS05290 PF05746 DALR anticodon binding domain VV_RS05290 PF03485 Arginyl tRNA synthetase N terminal domain VV_RS05295 PF06185 YecM protein VV_RS05300 PF01842 ACT domain VV_RS05300 PF00551 Formyl transferase VV_RS05310 PF04851 Type III restriction enzyme, res subunit VV_RS05310 PF13307 Helicase C-terminal domain VV_RS05315 PF00814 Glycoprotease family VV_RS05330 PF00561 alpha/beta hydrolase fold VV_RS05335 PF00501 AMP-binding enzyme VV_RS05335 PF13193 AMP-binding enzyme C-terminal domain VV_RS05340 PF00570 HRDC domain VV_RS05340 PF01612 3'-5' exonuclease VV_RS05345 PF03776 Septum formation topological specificity factor MinE VV_RS05350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VV_RS05355 PF03775 Septum formation inhibitor MinC, C-terminal domain VV_RS05355 PF05209 Septum formation inhibitor MinC, N-terminal domain VV_RS05360 PF05166 YcgL domain VV_RS05365 PF13406 Transglycosylase SLT domain VV_RS05370 PF03466 LysR substrate binding domain VV_RS05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS05375 PF07670 Nucleoside recognition VV_RS05375 PF07662 Na+ dependent nucleoside transporter C-terminus VV_RS05375 PF01773 Na+ dependent nucleoside transporter N-terminus VV_RS05385 PF00072 Response regulator receiver domain VV_RS05385 PF00486 Transcriptional regulatory protein, C terminal VV_RS05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS05390 PF00512 His Kinase A (phospho-acceptor) domain VV_RS05390 PF18719 ArlS sensor domain VV_RS05400 PF02801 Beta-ketoacyl synthase, C-terminal domain VV_RS05400 PF00109 Beta-ketoacyl synthase, N-terminal domain VV_RS05415 PF02801 Beta-ketoacyl synthase, C-terminal domain VV_RS05415 PF00109 Beta-ketoacyl synthase, N-terminal domain VV_RS05440 PF00221 Aromatic amino acid lyase VV_RS05445 PF00535 Glycosyl transferase family 2 VV_RS05455 PF00501 AMP-binding enzyme VV_RS05455 PF13193 AMP-binding enzyme C-terminal domain VV_RS05465 PF00550 Phosphopantetheine attachment site VV_RS05470 PF00550 Phosphopantetheine attachment site VV_RS05495 PF04820 Tryptophan halogenase VV_RS05510 PF02743 Cache domain VV_RS05510 PF00672 HAMP domain VV_RS05510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS05515 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VV_RS05520 PF00072 Response regulator receiver domain VV_RS05520 PF00486 Transcriptional regulatory protein, C terminal VV_RS05525 PF00672 HAMP domain VV_RS05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS05525 PF00512 His Kinase A (phospho-acceptor) domain VV_RS05530 PF01547 Bacterial extracellular solute-binding protein VV_RS05535 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS05545 PF03459 TOBE domain VV_RS05545 PF00005 ABC transporter VV_RS05545 PF17912 MalK OB fold domain VV_RS05550 PF03480 Bacterial extracellular solute-binding protein, family 7 VV_RS05555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VV_RS05560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV_RS05570 PF02954 Bacterial regulatory protein, Fis family VV_RS05570 PF00158 Sigma-54 interaction domain VV_RS05570 PF00072 Response regulator receiver domain VV_RS05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS05575 PF02743 Cache domain VV_RS05575 PF00512 His Kinase A (phospho-acceptor) domain VV_RS05580 PF05697 Bacterial trigger factor protein (TF) VV_RS05580 PF05698 Bacterial trigger factor protein (TF) C-terminus VV_RS05580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV_RS05585 PF00574 Clp protease VV_RS05590 PF10431 C-terminal, D2-small domain, of ClpB protein VV_RS05590 PF06689 ClpX C4-type zinc finger VV_RS05590 PF07724 AAA domain (Cdc48 subfamily) VV_RS05595 PF00004 ATPase family associated with various cellular activities (AAA) VV_RS05595 PF02190 ATP-dependent protease La (LON) substrate-binding domain VV_RS05595 PF05362 Lon protease (S16) C-terminal proteolytic domain VV_RS05600 PF00216 Bacterial DNA-binding protein VV_RS05605 PF13145 PPIC-type PPIASE domain VV_RS05625 PF13286 Phosphohydrolase-associated domain VV_RS05625 PF01966 HD domain VV_RS05635 PF00155 Aminotransferase class I and II VV_RS05640 PF00425 chorismate binding enzyme VV_RS05645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV_RS05645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV_RS05645 PF16582 Middle domain of thiamine pyrophosphate VV_RS05650 PF12697 Alpha/beta hydrolase family VV_RS05655 PF00378 Enoyl-CoA hydratase/isomerase VV_RS05660 PF13378 Enolase C-terminal domain-like VV_RS05665 PF13193 AMP-binding enzyme C-terminal domain VV_RS05665 PF00501 AMP-binding enzyme VV_RS05675 PF03601 Conserved hypothetical protein 698 VV_RS05680 PF07690 Major Facilitator Superfamily VV_RS05700 PF00529 HlyD membrane-fusion protein of T1SS VV_RS05700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV_RS05705 PF00873 AcrB/AcrD/AcrF family VV_RS05720 PF00291 Pyridoxal-phosphate dependent enzyme VV_RS05725 PF13404 AsnC-type helix-turn-helix domain VV_RS05725 PF01037 Lrp/AsnC ligand binding domain VV_RS05740 PF09619 Type III secretion system lipoprotein chaperone (YscW) VV_RS05745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VV_RS05755 PF03707 Bacterial signalling protein N terminal repeat VV_RS05755 PF00990 Diguanylate cyclase, GGDEF domain VV_RS05755 PF00563 EAL domain VV_RS05760 PF07969 Amidohydrolase family VV_RS05775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS05775 PF02743 Cache domain VV_RS05775 PF00672 HAMP domain VV_RS05780 PF01263 Aldose 1-epimerase VV_RS05785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV_RS05785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV_RS05790 PF01641 SelR domain VV_RS05800 PF07023 Protein of unknown function (DUF1315) VV_RS05805 PF17763 Glutaminase/Asparaginase C-terminal domain VV_RS05805 PF00710 Asparaginase, N-terminal VV_RS05810 PF01343 Peptidase family S49 VV_RS05815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VV_RS05815 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS05820 PF00881 Nitroreductase family VV_RS05825 PF01751 Toprim domain VV_RS05825 PF01131 DNA topoisomerase VV_RS05830 PF00850 Histone deacetylase domain VV_RS05835 PF00072 Response regulator receiver domain VV_RS05835 PF09308 LuxQ, periplasmic VV_RS05835 PF00512 His Kinase A (phospho-acceptor) domain VV_RS05835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS05840 PF00072 Response regulator receiver domain VV_RS05840 PF00990 Diguanylate cyclase, GGDEF domain VV_RS05845 PF13091 PLD-like domain VV_RS05850 PF04074 YhcH/YjgK/YiaL VV_RS05855 PF02386 Cation transport protein VV_RS05860 PF02080 TrkA-C domain VV_RS05860 PF02254 TrkA-N domain VV_RS05870 PF11893 Domain of unknown function (DUF3413) VV_RS05870 PF00884 Sulfatase VV_RS05875 PF07208 Protein of unknown function (DUF1414) VV_RS05880 PF04245 37-kD nucleoid-associated bacterial protein VV_RS05895 PF03553 Na+/H+ antiporter family VV_RS05900 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV_RS05900 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV_RS05910 PF00027 Cyclic nucleotide-binding domain VV_RS05910 PF00520 Ion transport protein VV_RS05915 PF01914 MarC family integral membrane protein VV_RS05920 PF00465 Iron-containing alcohol dehydrogenase VV_RS05920 PF00171 Aldehyde dehydrogenase family VV_RS05935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VV_RS05935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VV_RS05940 PF00462 Glutaredoxin VV_RS05950 PF13726 Na+-H+ antiporter family VV_RS05950 PF03553 Na+/H+ antiporter family VV_RS05955 PF00929 Exonuclease VV_RS05960 PF18393 MotY N-terminal domain VV_RS05960 PF00691 OmpA family VV_RS05965 PF10952 Protein of unknown function (DUF2753) VV_RS05970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV_RS05975 PF00730 HhH-GPD superfamily base excision DNA repair protein VV_RS05975 PF10576 Iron-sulfur binding domain of endonuclease III VV_RS05975 PF00633 Helix-hairpin-helix motif VV_RS05980 PF02508 Rnf-Nqr subunit, membrane protein VV_RS05985 PF04205 FMN-binding domain VV_RS05990 PF03116 NQR2, RnfD, RnfE family VV_RS05995 PF12838 4Fe-4S dicluster domain VV_RS05995 PF13375 RnfC Barrel sandwich hybrid domain VV_RS05995 PF10531 SLBB domain VV_RS05995 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VV_RS06000 PF04060 Putative Fe-S cluster VV_RS06005 PF02508 Rnf-Nqr subunit, membrane protein VV_RS06020 PF12344 Ultra-violet resistance protein B VV_RS06020 PF00271 Helicase conserved C-terminal domain VV_RS06020 PF17757 UvrB interaction domain VV_RS06020 PF02151 UvrB/uvrC motif VV_RS06020 PF04851 Type III restriction enzyme, res subunit VV_RS06025 PF02954 Bacterial regulatory protein, Fis family VV_RS06025 PF00072 Response regulator receiver domain VV_RS06025 PF00158 Sigma-54 interaction domain VV_RS06030 PF01627 Hpt domain VV_RS06035 PF01933 Uncharacterised protein family UPF0052 VV_RS06040 PF04055 Radical SAM superfamily VV_RS06040 PF06463 Molybdenum Cofactor Synthesis C VV_RS06045 PF00994 Probable molybdopterin binding domain VV_RS06050 PF01967 MoaC family VV_RS06055 PF02597 ThiS family VV_RS06060 PF02391 MoaE protein VV_RS06065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS06075 PF12911 N-terminal TM domain of oligopeptide transport permease C VV_RS06080 PF00005 ABC transporter VV_RS06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS06085 PF00005 ABC transporter VV_RS06085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS06090 PF13409 Glutathione S-transferase, N-terminal domain VV_RS06100 PF03795 YCII-related domain VV_RS06105 PF03061 Thioesterase superfamily VV_RS06110 PF04279 Intracellular septation protein A VV_RS06120 PF00375 Sodium:dicarboxylate symporter family VV_RS06125 PF00290 Tryptophan synthase alpha chain VV_RS06130 PF00291 Pyridoxal-phosphate dependent enzyme VV_RS06135 PF00218 Indole-3-glycerol phosphate synthase VV_RS06135 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VV_RS06140 PF00591 Glycosyl transferase family, a/b domain VV_RS06140 PF02885 Glycosyl transferase family, helical bundle domain VV_RS06145 PF00117 Glutamine amidotransferase class-I VV_RS06150 PF04715 Anthranilate synthase component I, N terminal region VV_RS06150 PF00425 chorismate binding enzyme VV_RS06155 PF08056 Tryptophan operon leader peptide VV_RS06160 PF02811 PHP domain VV_RS06165 PF01300 Telomere recombination VV_RS06175 PF00849 RNA pseudouridylate synthase VV_RS06175 PF01479 S4 domain VV_RS06180 PF04269 Protein of unknown function, DUF440 VV_RS06185 PF01132 Elongation factor P (EF-P) OB domain VV_RS06185 PF09285 Elongation factor P, C-terminal VV_RS06185 PF08207 Elongation factor P (EF-P) KOW-like domain VV_RS06195 PF00563 EAL domain VV_RS06195 PF00990 Diguanylate cyclase, GGDEF domain VV_RS06195 PF08448 PAS fold VV_RS06195 PF08447 PAS fold VV_RS06200 PF00136 DNA polymerase family B VV_RS06200 PF03104 DNA polymerase family B, exonuclease domain VV_RS06205 PF00072 Response regulator receiver domain VV_RS06205 PF00196 Bacterial regulatory proteins, luxR family VV_RS06210 PF08459 UvrC Helix-hairpin-helix N-terminal VV_RS06210 PF01541 GIY-YIG catalytic domain VV_RS06210 PF02151 UvrB/uvrC motif VV_RS06215 PF01066 CDP-alcohol phosphatidyltransferase VV_RS06240 PF00202 Aminotransferase class-III VV_RS06245 PF03435 Saccharopine dehydrogenase NADP binding domain VV_RS06245 PF16653 Saccharopine dehydrogenase C-terminal domain VV_RS06265 PF00994 Probable molybdopterin binding domain VV_RS06265 PF02464 Competence-damaged protein VV_RS06275 PF00268 Ribonucleotide reductase, small chain VV_RS06280 PF00317 Ribonucleotide reductase, all-alpha domain VV_RS06280 PF02867 Ribonucleotide reductase, barrel domain VV_RS06280 PF03477 ATP cone domain VV_RS06295 PF00521 DNA gyrase/topoisomerase IV, subunit A VV_RS06295 PF03989 DNA gyrase C-terminal domain, beta-propeller VV_RS06310 PF02335 Cytochrome c552 VV_RS06320 PF13247 4Fe-4S dicluster domain VV_RS06325 PF03916 Polysulphide reductase, NrfD VV_RS06330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VV_RS06330 PF01578 Cytochrome C assembly protein VV_RS06335 PF08534 Redoxin VV_RS06340 PF03918 Cytochrome C biogenesis protein VV_RS06355 PF01588 Putative tRNA binding domain VV_RS06355 PF09334 tRNA synthetases class I (M) VV_RS06360 PF10609 NUBPL iron-transfer P-loop NTPase VV_RS06365 PF00485 Phosphoribulokinase / Uridine kinase family VV_RS06375 PF12557 Cob(I)alamin adenosyltransferase N terminal VV_RS06375 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VV_RS06380 PF01451 Low molecular weight phosphotyrosine protein phosphatase VV_RS06385 PF00916 Sulfate permease family VV_RS06385 PF01740 STAS domain VV_RS06390 PF00575 S1 RNA binding domain VV_RS06390 PF10150 Ribonuclease E/G family VV_RS06390 PF12111 Polyribonucleotide phosphorylase C terminal VV_RS06395 PF00849 RNA pseudouridylate synthase VV_RS06395 PF01479 S4 domain VV_RS06400 PF02545 Maf-like protein VV_RS06405 PF02620 Large ribosomal RNA subunit accumulation protein YceD VV_RS06410 PF01783 Ribosomal L32p protein family VV_RS06415 PF02504 Fatty acid synthesis protein VV_RS06420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VV_RS06420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VV_RS06425 PF00698 Acyl transferase domain VV_RS06435 PF00550 Phosphopantetheine attachment site VV_RS06440 PF02801 Beta-ketoacyl synthase, C-terminal domain VV_RS06440 PF00109 Beta-ketoacyl synthase, N-terminal domain VV_RS06445 PF01063 Amino-transferase class IV VV_RS06450 PF02618 YceG-like family VV_RS06455 PF02223 Thymidylate kinase VV_RS06460 PF09115 DNA polymerase III, delta subunit, C terminal VV_RS06465 PF01026 TatD related DNase VV_RS06470 PF02378 Phosphotransferase system, EIIC VV_RS06470 PF00367 phosphotransferase system, EIIB VV_RS06480 PF00209 Sodium:neurotransmitter symporter family VV_RS06490 PF01734 Patatin-like phospholipase VV_RS06495 PF02887 Pyruvate kinase, alpha/beta domain VV_RS06495 PF00224 Pyruvate kinase, barrel domain VV_RS06500 PF00480 ROK family VV_RS06505 PF00072 Response regulator receiver domain VV_RS06505 PF01584 CheW-like domain VV_RS06510 PF01336 OB-fold nucleic acid binding domain VV_RS06510 PF07733 Bacterial DNA polymerase III alpha NTPase domain VV_RS06510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VV_RS06510 PF14579 Helix-hairpin-helix motif VV_RS06510 PF02811 PHP domain VV_RS06525 PF00106 short chain dehydrogenase VV_RS06530 PF08496 Peptidase family S49 N-terminal VV_RS06530 PF01343 Peptidase family S49 VV_RS06535 PF02224 Cytidylate kinase VV_RS06540 PF00575 S1 RNA binding domain VV_RS06545 PF00216 Bacterial DNA-binding protein VV_RS06550 PF06305 Lipopolysaccharide assembly protein A domain VV_RS06555 PF18073 Rubredoxin metal binding domain VV_RS06560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VV_RS06565 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS06570 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS06570 PF12911 N-terminal TM domain of oligopeptide transport permease C VV_RS06575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV_RS06580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS06580 PF00005 ABC transporter VV_RS06585 PF00005 ABC transporter VV_RS06585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS06605 PF13006 Insertion element 4 transposase N-terminal VV_RS06605 PF01609 Transposase DDE domain VV_RS06610 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VV_RS06620 PF03466 LysR substrate binding domain VV_RS06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS06630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VV_RS06630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VV_RS06635 PF01037 Lrp/AsnC ligand binding domain VV_RS06640 PF09397 Ftsk gamma domain VV_RS06640 PF17854 FtsK alpha domain VV_RS06640 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VV_RS06640 PF01580 FtsK/SpoIIIE family VV_RS06645 PF03548 Outer membrane lipoprotein carrier protein LolA VV_RS06650 PF00004 ATPase family associated with various cellular activities (AAA) VV_RS06650 PF12002 MgsA AAA+ ATPase C terminal VV_RS06650 PF16193 AAA C-terminal domain VV_RS06655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV_RS06655 PF02403 Seryl-tRNA synthetase N-terminal domain VV_RS06660 PF00202 Aminotransferase class-III VV_RS06665 PF04055 Radical SAM superfamily VV_RS06665 PF06968 Biotin and Thiamin Synthesis associated domain VV_RS06670 PF00155 Aminotransferase class I and II VV_RS06675 PF08241 Methyltransferase domain VV_RS06685 PF01435 Peptidase family M48 VV_RS06695 PF00106 short chain dehydrogenase VV_RS06730 PF08328 Adenylosuccinate lyase C-terminal VV_RS06730 PF00206 Lyase VV_RS06735 PF04356 Protein of unknown function (DUF489) VV_RS06750 PF00294 pfkB family carbohydrate kinase VV_RS06755 PF00816 H-NS histone family VV_RS06760 PF03553 Na+/H+ antiporter family VV_RS06765 PF01634 ATP phosphoribosyltransferase VV_RS06765 PF08029 HisG, C-terminal domain VV_RS06770 PF00815 Histidinol dehydrogenase VV_RS06775 PF00155 Aminotransferase class I and II VV_RS06780 PF00475 Imidazoleglycerol-phosphate dehydratase VV_RS06780 PF08645 Polynucleotide kinase 3 phosphatase VV_RS06785 PF00117 Glutamine amidotransferase class-I VV_RS06790 PF00977 Histidine biosynthesis protein VV_RS06795 PF00977 Histidine biosynthesis protein VV_RS06800 PF01502 Phosphoribosyl-AMP cyclohydrolase VV_RS06800 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VV_RS06805 PF02810 SEC-C motif VV_RS06810 PF08668 HDOD domain VV_RS06810 PF00563 EAL domain VV_RS06815 PF00149 Calcineurin-like phosphoesterase VV_RS06820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VV_RS06825 PF09190 DALR domain VV_RS06825 PF01406 tRNA synthetases class I (C) catalytic domain VV_RS06830 PF00265 Thymidine kinase VV_RS06840 PF01370 NAD dependent epimerase/dehydratase family VV_RS06845 PF03466 LysR substrate binding domain VV_RS06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS06865 PF01226 Formate/nitrite transporter VV_RS06870 PF03649 Uncharacterised protein family (UPF0014) VV_RS06875 PF06796 Periplasmic nitrate reductase protein NapE VV_RS06880 PF03264 NapC/NirT cytochrome c family, N-terminal region VV_RS06885 PF18364 Molybdopterin oxidoreductase N-terminal domain VV_RS06885 PF01568 Molydopterin dinucleotide binding domain VV_RS06885 PF00384 Molybdopterin oxidoreductase VV_RS06905 PF16874 Glycosyl hydrolase family 36 C-terminal domain VV_RS06905 PF16875 Glycosyl hydrolase family 36 N-terminal domain VV_RS06915 PF02833 DHHA2 domain VV_RS06915 PF01368 DHH family VV_RS06930 PF00005 ABC transporter VV_RS06935 PF00005 ABC transporter VV_RS06935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS06940 PF12911 N-terminal TM domain of oligopeptide transport permease C VV_RS06940 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS06945 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS06950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV_RS06955 PF00158 Sigma-54 interaction domain VV_RS06955 PF02954 Bacterial regulatory protein, Fis family VV_RS06960 PF04012 PspA/IM30 family VV_RS06965 PF06667 Phage shock protein B VV_RS06970 PF04024 PspC domain VV_RS06980 PF13533 Biotin-lipoyl like VV_RS06985 PF00873 AcrB/AcrD/AcrF family VV_RS06990 PF03352 Methyladenine glycosylase VV_RS06995 PF01053 Cys/Met metabolism PLP-dependent enzyme VV_RS07000 PF13091 PLD-like domain VV_RS07000 PF13396 Phospholipase_D-nuclease N-terminal VV_RS07005 PF00209 Sodium:neurotransmitter symporter family VV_RS07010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS07010 PF12729 Four helix bundle sensory module for signal transduction VV_RS07010 PF00672 HAMP domain VV_RS07015 PF00849 RNA pseudouridylate synthase VV_RS07025 PF00175 Oxidoreductase NAD-binding domain VV_RS07025 PF00111 2Fe-2S iron-sulfur cluster binding domain VV_RS07025 PF00970 Oxidoreductase FAD-binding domain VV_RS07030 PF03063 Prismane/CO dehydrogenase family VV_RS07035 PF00158 Sigma-54 interaction domain VV_RS07035 PF01590 GAF domain VV_RS07040 PF01066 CDP-alcohol phosphatidyltransferase VV_RS07045 PF00005 ABC transporter VV_RS07050 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS07055 PF13416 Bacterial extracellular solute-binding protein VV_RS07065 PF06945 Protein of unknown function (DUF1289) VV_RS07075 PF03707 Bacterial signalling protein N terminal repeat VV_RS07075 PF00990 Diguanylate cyclase, GGDEF domain VV_RS07075 PF00563 EAL domain VV_RS07090 PF01386 Ribosomal L25p family VV_RS07095 PF00512 His Kinase A (phospho-acceptor) domain VV_RS07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS07095 PF00672 HAMP domain VV_RS07100 PF00072 Response regulator receiver domain VV_RS07100 PF00486 Transcriptional regulatory protein, C terminal VV_RS07110 PF04851 Type III restriction enzyme, res subunit VV_RS07110 PF00271 Helicase conserved C-terminal domain VV_RS07115 PF01479 S4 domain VV_RS07115 PF00849 RNA pseudouridylate synthase VV_RS07120 PF07690 Major Facilitator Superfamily VV_RS07130 PF00999 Sodium/hydrogen exchanger family VV_RS07135 PF11066 Protein of unknown function (DUF2867) VV_RS07135 PF13460 NAD(P)H-binding VV_RS07140 PF00005 ABC transporter VV_RS07155 PF06965 Na+/H+ antiporter 1 VV_RS07165 PF02770 Acyl-CoA dehydrogenase, middle domain VV_RS07165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV_RS07165 PF09317 Domain of unknown function (DUF1974) VV_RS07165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV_RS07170 PF07055 Enoyl reductase FAD binding domain VV_RS07170 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VV_RS07170 PF12241 Trans-2-enoyl-CoA reductase catalytic region VV_RS07175 PF06826 Predicted Permease Membrane Region VV_RS07175 PF02080 TrkA-C domain VV_RS07180 PF00462 Glutaredoxin VV_RS07185 PF00465 Iron-containing alcohol dehydrogenase VV_RS07190 PF01380 SIS domain VV_RS07190 PF01418 Helix-turn-helix domain, rpiR family VV_RS07195 PF00282 Pyridoxal-dependent decarboxylase conserved domain VV_RS07205 PF03956 Lysine exporter LysO VV_RS07215 PF04994 TfoX C-terminal domain VV_RS07215 PF04993 TfoX N-terminal domain VV_RS07230 PF00512 His Kinase A (phospho-acceptor) domain VV_RS07230 PF00989 PAS fold VV_RS07230 PF00989 PAS fold VV_RS07230 PF13188 PAS domain VV_RS07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS07230 PF13426 PAS domain VV_RS07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS07230 PF00512 His Kinase A (phospho-acceptor) domain VV_RS07230 PF13188 PAS domain VV_RS07230 PF13426 PAS domain VV_RS07240 PF00266 Aminotransferase class-V VV_RS07245 PF00005 ABC transporter VV_RS07245 PF00664 ABC transporter transmembrane region VV_RS07250 PF00664 ABC transporter transmembrane region VV_RS07250 PF00005 ABC transporter VV_RS07255 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS07265 PF00266 Aminotransferase class-V VV_RS07275 PF00072 Response regulator receiver domain VV_RS07275 PF00990 Diguanylate cyclase, GGDEF domain VV_RS07280 PF00939 Sodium:sulfate symporter transmembrane region VV_RS07285 PF02698 DUF218 domain VV_RS07290 PF03949 Malic enzyme, NAD binding domain VV_RS07290 PF00390 Malic enzyme, N-terminal domain VV_RS07295 PF00270 DEAD/DEAH box helicase VV_RS07295 PF04408 Helicase associated domain (HA2) VV_RS07295 PF00271 Helicase conserved C-terminal domain VV_RS07295 PF08482 ATP-dependent helicase C-terminal VV_RS07300 PF02253 Phospholipase A1 VV_RS07310 PF01259 SAICAR synthetase VV_RS07320 PF04172 LrgB-like family VV_RS07325 PF03788 LrgA family VV_RS07330 PF00929 Exonuclease VV_RS07330 PF08411 Exonuclease C-terminal VV_RS07340 PF02277 Phosphoribosyltransferase VV_RS07345 PF02654 Cobalamin-5-phosphate synthase VV_RS07350 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VV_RS07365 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VV_RS07370 PF01032 FecCD transport family VV_RS07375 PF00005 ABC transporter VV_RS07390 PF07690 Major Facilitator Superfamily VV_RS07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS07395 PF03466 LysR substrate binding domain VV_RS07405 PF01863 Protein of unknown function DUF45 VV_RS07410 PF05971 RNA methyltransferase VV_RS07425 PF04204 Homoserine O-succinyltransferase VV_RS07430 PF01546 Peptidase family M20/M25/M40 VV_RS07430 PF07687 Peptidase dimerisation domain VV_RS07435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV_RS07440 PF04209 homogentisate 1,2-dioxygenase VV_RS07450 PF14497 Glutathione S-transferase, C-terminal domain VV_RS07450 PF02798 Glutathione S-transferase, N-terminal domain VV_RS07485 PF00072 Response regulator receiver domain VV_RS07485 PF00990 Diguanylate cyclase, GGDEF domain VV_RS07490 PF00313 'Cold-shock' DNA-binding domain VV_RS07500 PF00141 Peroxidase VV_RS07505 PF03009 Glycerophosphoryl diester phosphodiesterase family VV_RS07510 PF00455 DeoR C terminal sensor domain VV_RS07510 PF08220 DeoR-like helix-turn-helix domain VV_RS07515 PF00005 ABC transporter VV_RS07515 PF17912 MalK OB fold domain VV_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS07525 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS07530 PF13416 Bacterial extracellular solute-binding protein VV_RS07535 PF00072 Response regulator receiver domain VV_RS07540 PF02743 Cache domain VV_RS07540 PF00672 HAMP domain VV_RS07540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS07545 PF01925 Sulfite exporter TauE/SafE VV_RS07555 PF00196 Bacterial regulatory proteins, luxR family VV_RS07555 PF00072 Response regulator receiver domain VV_RS07580 PF01970 Tripartite tricarboxylate transporter TctA family VV_RS07610 PF00285 Citrate synthase, C-terminal domain VV_RS07615 PF00330 Aconitase family (aconitate hydratase) VV_RS07615 PF00694 Aconitase C-terminal domain VV_RS07620 PF04303 PrpF protein VV_RS07625 PF00501 AMP-binding enzyme VV_RS07625 PF13193 AMP-binding enzyme C-terminal domain VV_RS07625 PF16177 Acetyl-coenzyme A synthetase N-terminus VV_RS07635 PF00089 Trypsin VV_RS07645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS07645 PF02743 Cache domain VV_RS07645 PF00672 HAMP domain VV_RS07655 PF04055 Radical SAM superfamily VV_RS07660 PF06508 Queuosine biosynthesis protein QueC VV_RS07665 PF17151 Periplasmic sensor domain VV_RS07665 PF00990 Diguanylate cyclase, GGDEF domain VV_RS07690 PF10672 S-adenosylmethionine-dependent methyltransferase VV_RS07690 PF17785 PUA-like domain VV_RS07695 PF00672 HAMP domain VV_RS07695 PF02743 Cache domain VV_RS07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS07700 PF00708 Acylphosphatase VV_RS07705 PF04358 DsrC like protein VV_RS07715 PF01027 Inhibitor of apoptosis-promoting Bax1 VV_RS07720 PF00005 ABC transporter VV_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS07735 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV_RS07740 PF14824 Sirohaem biosynthesis protein central VV_RS07740 PF10414 Sirohaem synthase dimerisation region VV_RS07740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VV_RS07745 PF12800 4Fe-4S binding domain VV_RS07745 PF12838 4Fe-4S dicluster domain VV_RS07750 PF13237 4Fe-4S dicluster domain VV_RS07750 PF12801 4Fe-4S binding domain VV_RS07755 PF01553 Acyltransferase VV_RS07765 PF02423 Ornithine cyclodeaminase/mu-crystallin family VV_RS07775 PF01571 Aminomethyltransferase folate-binding domain VV_RS07775 PF08669 Glycine cleavage T-protein C-terminal barrel domain VV_RS07775 PF01266 FAD dependent oxidoreductase VV_RS07775 PF16350 FAD dependent oxidoreductase central domain VV_RS07785 PF03401 Tripartite tricarboxylate transporter family receptor VV_RS07800 PF00171 Aldehyde dehydrogenase family VV_RS07810 PF01613 Flavin reductase like domain VV_RS07815 PF13006 Insertion element 4 transposase N-terminal VV_RS07815 PF01609 Transposase DDE domain VV_RS07820 PF01047 MarR family VV_RS07825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV_RS07840 PF01557 Fumarylacetoacetate (FAA) hydrolase family VV_RS07845 PF03328 HpcH/HpaI aldolase/citrate lyase family VV_RS07850 PF01557 Fumarylacetoacetate (FAA) hydrolase family VV_RS07855 PF01557 Fumarylacetoacetate (FAA) hydrolase family VV_RS07860 PF00171 Aldehyde dehydrogenase family VV_RS07875 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VV_RS07880 PF00171 Aldehyde dehydrogenase family VV_RS07890 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VV_RS07895 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VV_RS07900 PF01810 LysE type translocator VV_RS07910 PF01235 Sodium:alanine symporter family VV_RS07940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV_RS07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS07955 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VV_RS07955 PF17203 Single cache domain 3 VV_RS07955 PF00989 PAS fold VV_RS07960 PF00072 Response regulator receiver domain VV_RS07960 PF12431 Transcriptional regulator VV_RS07965 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VV_RS07965 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VV_RS07970 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VV_RS07975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VV_RS07975 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VV_RS08005 PF02397 Bacterial sugar transferase VV_RS08015 PF13439 Glycosyltransferase Family 4 VV_RS08015 PF00534 Glycosyl transferases group 1 VV_RS08060 PF00158 Sigma-54 interaction domain VV_RS08060 PF00072 Response regulator receiver domain VV_RS08060 PF02954 Bacterial regulatory protein, Fis family VV_RS08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS08065 PF17149 Periplasmic sensor domain found in signal transduction proteins VV_RS08065 PF00072 Response regulator receiver domain VV_RS08065 PF00672 HAMP domain VV_RS08065 PF01627 Hpt domain VV_RS08065 PF00512 His Kinase A (phospho-acceptor) domain VV_RS08080 PF02563 Polysaccharide biosynthesis/export protein VV_RS08080 PF10531 SLBB domain VV_RS08090 PF01740 STAS domain VV_RS08095 PF14743 DNA ligase OB-like domain VV_RS08095 PF01068 ATP dependent DNA ligase domain VV_RS08100 PF17158 Membrane-associated sensor, integral membrane domain VV_RS08100 PF00990 Diguanylate cyclase, GGDEF domain VV_RS08105 PF04461 Protein of unknown function (DUF520) VV_RS08110 PF00793 DAHP synthetase I family VV_RS08125 PF17783 CvfB-like winged helix domain VV_RS08125 PF13509 S1 domain VV_RS08130 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VV_RS08130 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VV_RS08130 PF01189 16S rRNA methyltransferase RsmB/F VV_RS08135 PF02470 MlaD protein VV_RS08140 PF04403 Paraquat-inducible protein A VV_RS08145 PF00664 ABC transporter transmembrane region VV_RS08145 PF00005 ABC transporter VV_RS08150 PF13185 GAF domain VV_RS08155 PF04352 ProQ/FINO family VV_RS08155 PF17516 ProQ C-terminal domain VV_RS08160 PF00595 PDZ domain VV_RS08160 PF03572 Peptidase family S41 VV_RS08160 PF17804 Tail specific protease N-terminal domain VV_RS08160 PF11818 C-terminal domain of tail specific protease (DUF3340) VV_RS08170 PF11940 Domain of unknown function (DUF3458) Ig-like fold VV_RS08170 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VV_RS08170 PF01433 Peptidase family M1 domain VV_RS08175 PF05088 Bacterial NAD-glutamate dehydrogenase VV_RS08180 PF01180 Dihydroorotate dehydrogenase VV_RS08185 PF07126 Cell-division protein ZapC VV_RS08190 PF02926 THUMP domain VV_RS08190 PF01170 Putative RNA methylase family UPF0020 VV_RS08190 PF10672 S-adenosylmethionine-dependent methyltransferase VV_RS08200 PF12848 ABC transporter VV_RS08200 PF16326 ABC transporter C-terminal domain VV_RS08200 PF00005 ABC transporter VV_RS08210 PF04957 Ribosome modulation factor VV_RS08215 PF07977 FabA-like domain VV_RS08220 PF05362 Lon protease (S16) C-terminal proteolytic domain VV_RS08220 PF13654 AAA domain VV_RS08225 PF17414 MatP C-terminal ribbon-helix-helix domain VV_RS08225 PF06303 MatP N-terminal domain VV_RS08245 PF00072 Response regulator receiver domain VV_RS08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS08245 PF09308 LuxQ, periplasmic VV_RS08245 PF00512 His Kinase A (phospho-acceptor) domain VV_RS08260 PF00115 Cytochrome C and Quinol oxidase polypeptide I VV_RS08275 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VV_RS08275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VV_RS08285 PF00403 Heavy-metal-associated domain VV_RS08300 PF00027 Cyclic nucleotide-binding domain VV_RS08300 PF13545 Crp-like helix-turn-helix domain VV_RS08305 PF00582 Universal stress protein family VV_RS08310 PF01171 PP-loop family VV_RS08320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VV_RS08330 PF00005 ABC transporter VV_RS08330 PF08402 TOBE domain VV_RS08335 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS08340 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS08345 PF13416 Bacterial extracellular solute-binding protein VV_RS08350 PF13416 Bacterial extracellular solute-binding protein VV_RS08355 PF02146 Sir2 family VV_RS08360 PF00909 Ammonium Transporter Family VV_RS08390 PF13247 4Fe-4S dicluster domain VV_RS08395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VV_RS08395 PF00384 Molybdopterin oxidoreductase VV_RS08395 PF01568 Molydopterin dinucleotide binding domain VV_RS08425 PF02634 FdhD/NarQ family VV_RS08430 PF02743 Cache domain VV_RS08430 PF00672 HAMP domain VV_RS08430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS08435 PF00005 ABC transporter VV_RS08435 PF12848 ABC transporter VV_RS08450 PF00989 PAS fold VV_RS08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS08450 PF00512 His Kinase A (phospho-acceptor) domain VV_RS08455 PF00158 Sigma-54 interaction domain VV_RS08455 PF00072 Response regulator receiver domain VV_RS08455 PF02954 Bacterial regulatory protein, Fis family VV_RS08460 PF12849 PBP superfamily domain VV_RS08465 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS08470 PF08402 TOBE domain VV_RS08470 PF00005 ABC transporter VV_RS08475 PF12804 MobA-like NTP transferase domain VV_RS08480 PF03453 MoeA N-terminal region (domain I and II) VV_RS08480 PF00994 Probable molybdopterin binding domain VV_RS08480 PF03454 MoeA C-terminal region (domain IV) VV_RS08490 PF00480 ROK family VV_RS08495 PF03942 DTW domain VV_RS08505 PF00672 HAMP domain VV_RS08505 PF02743 Cache domain VV_RS08505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS08510 PF00877 NlpC/P60 family VV_RS08520 PF00990 Diguanylate cyclase, GGDEF domain VV_RS08520 PF05230 MASE2 domain VV_RS08525 PF01339 CheB methylesterase VV_RS08525 PF00072 Response regulator receiver domain VV_RS08530 PF03881 Fructosamine kinase VV_RS08540 PF00677 Lumazine binding domain VV_RS08545 PF01554 MatE VV_RS08610 PF00665 Integrase core domain VV_RS08610 PF13276 HTH-like domain VV_RS08610 PF13333 Integrase core domain VV_RS08635 PF13302 Acetyltransferase (GNAT) domain VV_RS08725 PF05840 Bacteriophage replication gene A protein (GPA) VV_RS08740 PF00589 Phage integrase family VV_RS08770 PF13333 Integrase core domain VV_RS08770 PF00665 Integrase core domain VV_RS08770 PF13276 HTH-like domain VV_RS08785 PF13302 Acetyltransferase (GNAT) domain VV_RS08790 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system VV_RS08795 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VV_RS08920 PF13302 Acetyltransferase (GNAT) domain VV_RS08930 PF13276 HTH-like domain VV_RS08930 PF13333 Integrase core domain VV_RS08930 PF00665 Integrase core domain VV_RS08955 PF13276 HTH-like domain VV_RS08955 PF13333 Integrase core domain VV_RS08955 PF00665 Integrase core domain VV_RS09005 PF02798 Glutathione S-transferase, N-terminal domain VV_RS09005 PF00043 Glutathione S-transferase, C-terminal domain VV_RS09060 PF13276 HTH-like domain VV_RS09060 PF13333 Integrase core domain VV_RS09060 PF00665 Integrase core domain VV_RS09130 PF13302 Acetyltransferase (GNAT) domain VV_RS09155 PF13673 Acetyltransferase (GNAT) domain VV_RS09190 PF13673 Acetyltransferase (GNAT) domain VV_RS09195 PF13302 Acetyltransferase (GNAT) domain VV_RS09305 PF09905 DNA-binding protein VF530 VV_RS09325 PF00589 Phage integrase family VV_RS09325 PF13495 Phage integrase, N-terminal SAM-like domain VV_RS09330 PF00453 Ribosomal protein L20 VV_RS09335 PF01632 Ribosomal protein L35 VV_RS09340 PF05198 Translation initiation factor IF-3, N-terminal domain VV_RS09340 PF00707 Translation initiation factor IF-3, C-terminal domain VV_RS09345 PF03129 Anticodon binding domain VV_RS09345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VV_RS09345 PF02824 TGS domain VV_RS09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV_RS09355 PF07070 SpoOM protein VV_RS09360 PF00392 Bacterial regulatory proteins, gntR family VV_RS09360 PF07702 UTRA domain VV_RS09365 PF01979 Amidohydrolase family VV_RS09370 PF00491 Arginase family VV_RS09375 PF01175 Urocanase Rossmann-like domain VV_RS09375 PF17392 Urocanase C-terminal domain VV_RS09375 PF17391 Urocanase N-terminal domain VV_RS09380 PF00221 Aromatic amino acid lyase VV_RS09390 PF00089 Trypsin VV_RS09400 PF01565 FAD binding domain VV_RS09400 PF02913 FAD linked oxidases, C-terminal domain VV_RS09400 PF13183 4Fe-4S dicluster domain VV_RS09415 PF00691 OmpA family VV_RS09415 PF13488 Glycine zipper VV_RS09430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VV_RS09430 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VV_RS09435 PF02222 ATP-grasp domain VV_RS09440 PF05724 Thiopurine S-methyltransferase (TPMT) VV_RS09450 PF00216 Bacterial DNA-binding protein VV_RS09465 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VV_RS09465 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VV_RS09470 PF01588 Putative tRNA binding domain VV_RS09470 PF03483 B3/4 domain VV_RS09470 PF03484 tRNA synthetase B5 domain VV_RS09470 PF03147 Ferredoxin-fold anticodon binding domain VV_RS09470 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VV_RS09475 PF01409 tRNA synthetases class II core domain (F) VV_RS09475 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VV_RS09480 PF00072 Response regulator receiver domain VV_RS09480 PF00990 Diguanylate cyclase, GGDEF domain VV_RS09550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VV_RS09550 PF17810 Arginine decarboxylase helical bundle domain VV_RS09550 PF17944 Arginine decarboxylase C-terminal helical extension VV_RS09555 PF00491 Arginase family VV_RS09560 PF07690 Major Facilitator Superfamily VV_RS09565 PF03280 Proteobacterial lipase chaperone protein VV_RS09570 PF00561 alpha/beta hydrolase fold VV_RS09595 PF00271 Helicase conserved C-terminal domain VV_RS09595 PF04408 Helicase associated domain (HA2) VV_RS09595 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VV_RS09595 PF00270 DEAD/DEAH box helicase VV_RS09595 PF11898 Domain of unknown function (DUF3418) VV_RS09605 PF02525 Flavodoxin-like fold VV_RS09640 PF00437 Type II/IV secretion system protein VV_RS09645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VV_RS09655 PF04972 BON domain VV_RS09655 PF13629 Pilus formation protein N terminal region VV_RS09655 PF00263 Bacterial type II and III secretion system protein VV_RS09685 PF06629 MltA-interacting protein MipA VV_RS09710 PF00990 Diguanylate cyclase, GGDEF domain VV_RS09710 PF17158 Membrane-associated sensor, integral membrane domain VV_RS09720 PF00012 Hsp70 protein VV_RS09725 PF00012 Hsp70 protein VV_RS09740 PF00563 EAL domain VV_RS09740 PF00990 Diguanylate cyclase, GGDEF domain VV_RS09740 PF03707 Bacterial signalling protein N terminal repeat VV_RS09750 PF07963 Prokaryotic N-terminal methylation motif VV_RS09765 PF00534 Glycosyl transferases group 1 VV_RS09765 PF13439 Glycosyltransferase Family 4 VV_RS09770 PF00534 Glycosyl transferases group 1 VV_RS09770 PF13439 Glycosyltransferase Family 4 VV_RS09795 PF02563 Polysaccharide biosynthesis/export protein VV_RS09795 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VV_RS09795 PF10531 SLBB domain VV_RS09805 PF02397 Bacterial sugar transferase VV_RS09810 PF01235 Sodium:alanine symporter family VV_RS09815 PF00664 ABC transporter transmembrane region VV_RS09815 PF00005 ABC transporter VV_RS09820 PF00005 ABC transporter VV_RS09820 PF00664 ABC transporter transmembrane region VV_RS09835 PF00210 Ferritin-like domain VV_RS09840 PF00072 Response regulator receiver domain VV_RS09845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV_RS09850 PF03222 Tryptophan/tyrosine permease family VV_RS09855 PF00781 Diacylglycerol kinase catalytic domain VV_RS09865 PF01734 Patatin-like phospholipase VV_RS09870 PF01966 HD domain VV_RS09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS09885 PF03466 LysR substrate binding domain VV_RS09890 PF04055 Radical SAM superfamily VV_RS09895 PF11230 Protein of unknown function (DUF3029) VV_RS09900 PF03707 Bacterial signalling protein N terminal repeat VV_RS09900 PF00990 Diguanylate cyclase, GGDEF domain VV_RS09900 PF00563 EAL domain VV_RS09900 PF13188 PAS domain VV_RS09905 PF11871 Domain of unknown function (DUF3391) VV_RS09905 PF01966 HD domain VV_RS09915 PF00563 EAL domain VV_RS09915 PF05231 MASE1 VV_RS09920 PF00990 Diguanylate cyclase, GGDEF domain VV_RS09920 PF17158 Membrane-associated sensor, integral membrane domain VV_RS09930 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV_RS09930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS09930 PF00512 His Kinase A (phospho-acceptor) domain VV_RS09935 PF00939 Sodium:sulfate symporter transmembrane region VV_RS09950 PF13302 Acetyltransferase (GNAT) domain VV_RS09955 PF18024 Helix-turn-helix domain VV_RS09955 PF00158 Sigma-54 interaction domain VV_RS09955 PF13188 PAS domain VV_RS09960 PF05128 Domain of unknown function (DUF697) VV_RS09965 PF04317 YcjX-like family, DUF463 VV_RS09980 PF04715 Anthranilate synthase component I, N terminal region VV_RS09980 PF00425 chorismate binding enzyme VV_RS09985 PF09308 LuxQ, periplasmic VV_RS09985 PF00072 Response regulator receiver domain VV_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS09985 PF00512 His Kinase A (phospho-acceptor) domain VV_RS09995 PF00293 NUDIX domain VV_RS10000 PF03222 Tryptophan/tyrosine permease family VV_RS10005 PF03313 Serine dehydratase alpha chain VV_RS10005 PF03315 Serine dehydratase beta chain VV_RS10010 PF00563 EAL domain VV_RS10010 PF04940 Sensors of blue-light using FAD VV_RS10020 PF01242 6-pyruvoyl tetrahydropterin synthase VV_RS10025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS10025 PF00672 HAMP domain VV_RS10025 PF17200 Single Cache domain 2 VV_RS10030 PF01336 OB-fold nucleic acid binding domain VV_RS10030 PF00152 tRNA synthetases class II (D, K and N) VV_RS10040 PF00155 Aminotransferase class I and II VV_RS10040 PF00392 Bacterial regulatory proteins, gntR family VV_RS10055 PF01966 HD domain VV_RS10055 PF00672 HAMP domain VV_RS10060 PF00155 Aminotransferase class I and II VV_RS10080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS10080 PF00672 HAMP domain VV_RS10080 PF02743 Cache domain VV_RS10085 PF02028 BCCT, betaine/carnitine/choline family transporter VV_RS10090 PF01047 MarR family VV_RS10095 PF00072 Response regulator receiver domain VV_RS10095 PF00196 Bacterial regulatory proteins, luxR family VV_RS10100 PF17200 Single Cache domain 2 VV_RS10100 PF07730 Histidine kinase VV_RS10105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VV_RS10115 PF03480 Bacterial extracellular solute-binding protein, family 7 VV_RS10120 PF01609 Transposase DDE domain VV_RS10120 PF13006 Insertion element 4 transposase N-terminal VV_RS10135 PF00753 Metallo-beta-lactamase superfamily VV_RS10140 PF05951 Bacterial protein of unknown function (DUF882) VV_RS10145 PF01471 Putative peptidoglycan binding domain VV_RS10145 PF03734 L,D-transpeptidase catalytic domain VV_RS10170 PF00925 GTP cyclohydrolase II VV_RS10175 PF00392 Bacterial regulatory proteins, gntR family VV_RS10175 PF07840 FadR C-terminal domain VV_RS10180 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VV_RS10185 PF02600 Disulfide bond formation protein DsbB VV_RS10190 PF02810 SEC-C motif VV_RS10190 PF03695 Uncharacterised protein family (UPF0149) VV_RS10195 PF01207 Dihydrouridine synthase (Dus) VV_RS10200 PF00990 Diguanylate cyclase, GGDEF domain VV_RS10200 PF00072 Response regulator receiver domain VV_RS10205 PF00128 Alpha amylase, catalytic domain VV_RS10205 PF02903 Alpha amylase, N-terminal ig-like domain VV_RS10210 PF00005 ABC transporter VV_RS10215 PF02653 Branched-chain amino acid transport system / permease component VV_RS10225 PF04217 Protein of unknown function, DUF412 VV_RS10230 PF00871 Acetokinase family VV_RS10235 PF07085 DRTGG domain VV_RS10235 PF01515 Phosphate acetyl/butaryl transferase VV_RS10240 PF08267 Cobalamin-independent synthase, N-terminal domain VV_RS10240 PF01717 Cobalamin-independent synthase, Catalytic domain VV_RS10245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS10245 PF03466 LysR substrate binding domain VV_RS10260 PF00990 Diguanylate cyclase, GGDEF domain VV_RS10260 PF00563 EAL domain VV_RS10260 PF03707 Bacterial signalling protein N terminal repeat VV_RS10265 PF00563 EAL domain VV_RS10265 PF00990 Diguanylate cyclase, GGDEF domain VV_RS10265 PF03707 Bacterial signalling protein N terminal repeat VV_RS10270 PF08497 Radical SAM N-terminal VV_RS10270 PF11842 Domain of unknown function (DUF3362) VV_RS10270 PF04055 Radical SAM superfamily VV_RS10275 PF00563 EAL domain VV_RS10275 PF00990 Diguanylate cyclase, GGDEF domain VV_RS10275 PF03707 Bacterial signalling protein N terminal repeat VV_RS10285 PF00916 Sulfate permease family VV_RS10285 PF01740 STAS domain VV_RS10290 PF02311 AraC-like ligand binding domain VV_RS10290 PF12833 Helix-turn-helix domain VV_RS10330 PF00005 ABC transporter VV_RS10385 PF03741 Integral membrane protein TerC family VV_RS10390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV_RS10390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV_RS10395 PF00465 Iron-containing alcohol dehydrogenase VV_RS10400 PF00596 Class II Aldolase and Adducin N-terminal domain VV_RS10405 PF05025 RbsD / FucU transport protein family VV_RS10410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VV_RS10410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VV_RS10415 PF07881 L-fucose isomerase, first N-terminal domain VV_RS10415 PF07882 L-fucose isomerase, second N-terminal domain VV_RS10415 PF02952 L-fucose isomerase, C-terminal domain VV_RS10420 PF07690 Major Facilitator Superfamily VV_RS10425 PF08220 DeoR-like helix-turn-helix domain VV_RS10425 PF00455 DeoR C terminal sensor domain VV_RS10430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS10430 PF02743 Cache domain VV_RS10430 PF00672 HAMP domain VV_RS10435 PF13419 Haloacid dehalogenase-like hydrolase VV_RS10450 PF04229 GrpB protein VV_RS10475 PF02223 Thymidylate kinase VV_RS10515 PF02384 N-6 DNA Methylase VV_RS10515 PF12161 HsdM N-terminal domain VV_RS10525 PF18766 SWI2/SNF2 ATPase VV_RS10525 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VV_RS10525 PF11867 Domain of unknown function (DUF3387) VV_RS10535 PF02384 N-6 DNA Methylase VV_RS10535 PF12161 HsdM N-terminal domain VV_RS10545 PF02384 N-6 DNA Methylase VV_RS10555 PF00271 Helicase conserved C-terminal domain VV_RS10555 PF00176 SNF2 family N-terminal domain VV_RS10590 PF13737 Transposase DDE domain VV_RS10605 PF01568 Molydopterin dinucleotide binding domain VV_RS10605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VV_RS10605 PF00384 Molybdopterin oxidoreductase VV_RS10610 PF03916 Polysulphide reductase, NrfD VV_RS10615 PF13247 4Fe-4S dicluster domain VV_RS10620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS10620 PF00512 His Kinase A (phospho-acceptor) domain VV_RS10625 PF00196 Bacterial regulatory proteins, luxR family VV_RS10625 PF00072 Response regulator receiver domain VV_RS10630 PF13737 Transposase DDE domain VV_RS10665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS10665 PF00672 HAMP domain VV_RS10665 PF12729 Four helix bundle sensory module for signal transduction VV_RS10670 PF00563 EAL domain VV_RS10670 PF00990 Diguanylate cyclase, GGDEF domain VV_RS10670 PF03707 Bacterial signalling protein N terminal repeat VV_RS10685 PF01609 Transposase DDE domain VV_RS10685 PF13006 Insertion element 4 transposase N-terminal VV_RS10715 PF03949 Malic enzyme, NAD binding domain VV_RS10715 PF00390 Malic enzyme, N-terminal domain VV_RS10720 PF10397 Adenylosuccinate lyase C-terminus VV_RS10720 PF00206 Lyase VV_RS10725 PF03606 C4-dicarboxylate anaerobic carrier VV_RS10735 PF00267 Gram-negative porin VV_RS10745 PF01418 Helix-turn-helix domain, rpiR family VV_RS10745 PF01380 SIS domain VV_RS10755 PF04002 RadC-like JAB domain VV_RS10770 PF00075 RNase H VV_RS10810 PF13356 Arm DNA-binding domain VV_RS10810 PF00589 Phage integrase family VV_RS10820 PF06610 L-alanine exporter VV_RS10825 PF00512 His Kinase A (phospho-acceptor) domain VV_RS10825 PF09308 LuxQ, periplasmic VV_RS10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS10825 PF00072 Response regulator receiver domain VV_RS10835 PF03738 Glutathionylspermidine synthase preATP-grasp VV_RS10845 PF03994 Domain of Unknown Function (DUF350) VV_RS10855 PF02445 Quinolinate synthetase A protein VV_RS10860 PF16331 TolA binding protein trimerisation VV_RS10860 PF13174 Tetratricopeptide repeat VV_RS10865 PF00691 OmpA family VV_RS10870 PF07676 WD40-like Beta Propeller Repeat VV_RS10870 PF04052 TolB amino-terminal domain VV_RS10880 PF02472 Biopolymer transport protein ExbD/TolR VV_RS10885 PF01618 MotA/TolQ/ExbB proton channel family VV_RS10890 PF03061 Thioesterase superfamily VV_RS10905 PF02322 Cytochrome bd terminal oxidase subunit II VV_RS10910 PF01654 Cytochrome bd terminal oxidase subunit I VV_RS10915 PF05491 RuvB C-terminal winged helix domain VV_RS10915 PF05496 Holliday junction DNA helicase RuvB P-loop domain VV_RS10915 PF17864 RuvB AAA lid domain VV_RS10920 PF07499 RuvA, C-terminal domain VV_RS10920 PF01330 RuvA N terminal domain VV_RS10925 PF02203 Tar ligand binding domain homologue VV_RS10925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS10925 PF00672 HAMP domain VV_RS10930 PF02075 Crossover junction endodeoxyribonuclease RuvC VV_RS10935 PF02938 GAD domain VV_RS10935 PF00152 tRNA synthetases class II (D, K and N) VV_RS10935 PF01336 OB-fold nucleic acid binding domain VV_RS10945 PF13649 Methyltransferase domain VV_RS10950 PF08003 Protein of unknown function (DUF1698) VV_RS10955 PF18030 RimK PreATP-grasp domain VV_RS10955 PF08443 RimK-like ATP-grasp domain VV_RS10970 PF05199 GMC oxidoreductase VV_RS10970 PF00732 GMC oxidoreductase VV_RS10975 PF00171 Aldehyde dehydrogenase family VV_RS10980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VV_RS10980 PF12833 Helix-turn-helix domain VV_RS10985 PF04310 MukB N-terminal VV_RS10985 PF16330 MukB hinge domain VV_RS10990 PF04288 MukE-like family VV_RS10995 PF03882 MukF winged-helix domain VV_RS10995 PF17193 MukF C-terminal domain VV_RS10995 PF17192 MukF middle domain VV_RS11000 PF13847 Methyltransferase domain VV_RS11005 PF02698 DUF218 domain VV_RS11010 PF00072 Response regulator receiver domain VV_RS11010 PF00486 Transcriptional regulatory protein, C terminal VV_RS11015 PF02613 Nitrate reductase delta subunit VV_RS11020 PF00356 Bacterial regulatory proteins, lacI family VV_RS11025 PF04993 TfoX N-terminal domain VV_RS11025 PF04994 TfoX C-terminal domain VV_RS11040 PF00561 alpha/beta hydrolase fold VV_RS11045 PF00534 Glycosyl transferases group 1 VV_RS11045 PF08323 Starch synthase catalytic domain VV_RS11050 PF00483 Nucleotidyl transferase VV_RS11055 PF01751 Toprim domain VV_RS11055 PF01396 Topoisomerase DNA binding C4 zinc finger VV_RS11055 PF01131 DNA topoisomerase VV_RS11055 PF08272 Topoisomerase I zinc-ribbon-like VV_RS11060 PF10692 Protein of unknown function (DUF2498) VV_RS11065 PF13006 Insertion element 4 transposase N-terminal VV_RS11065 PF01609 Transposase DDE domain VV_RS11070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VV_RS11080 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VV_RS11085 PF04376 Arginine-tRNA-protein transferase, N terminus VV_RS11085 PF04377 Arginine-tRNA-protein transferase, C terminus VV_RS11090 PF01176 Translation initiation factor 1A / IF-1 VV_RS11095 PF07724 AAA domain (Cdc48 subfamily) VV_RS11095 PF00004 ATPase family associated with various cellular activities (AAA) VV_RS11095 PF17871 AAA lid domain VV_RS11095 PF10431 C-terminal, D2-small domain, of ClpB protein VV_RS11095 PF02861 Clp amino terminal domain, pathogenicity island component VV_RS11100 PF02617 ATP-dependent Clp protease adaptor protein ClpS VV_RS11105 PF00313 'Cold-shock' DNA-binding domain VV_RS11110 PF03971 Monomeric isocitrate dehydrogenase VV_RS11115 PF00849 RNA pseudouridylate synthase VV_RS11120 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VV_RS11125 PF13609 Gram-negative porin VV_RS11130 PF06733 DEAD_2 VV_RS11130 PF13307 Helicase C-terminal domain VV_RS11135 PF01925 Sulfite exporter TauE/SafE VV_RS11140 PF07445 Primosomal replication protein priC VV_RS11145 PF10689 Protein of unknown function (DUF2496) VV_RS11150 PF02743 Cache domain VV_RS11150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS11150 PF00672 HAMP domain VV_RS11155 PF03372 Endonuclease/Exonuclease/phosphatase family VV_RS11165 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS11175 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV_RS11180 PF00005 ABC transporter VV_RS11195 PF01228 Glycine radical VV_RS11195 PF02901 Pyruvate formate lyase-like VV_RS11205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS11205 PF00672 HAMP domain VV_RS11210 PF04055 Radical SAM superfamily VV_RS11220 PF03887 YfbU domain VV_RS11225 PF08298 PrkA AAA domain VV_RS11225 PF06798 PrkA serine protein kinase C-terminal domain VV_RS11230 PF04285 Protein of unknown function (DUF444) VV_RS11235 PF04293 SpoVR like protein VV_RS11240 PF17155 Gammaproteobacterial periplasmic sensor domain VV_RS11240 PF00990 Diguanylate cyclase, GGDEF domain VV_RS11245 PF02348 Cytidylyltransferase VV_RS11250 PF03966 Trm112p-like protein VV_RS11255 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VV_RS11260 PF00664 ABC transporter transmembrane region VV_RS11260 PF00005 ABC transporter VV_RS11265 PF13567 Domain of unknown function (DUF4131) VV_RS11265 PF00753 Metallo-beta-lactamase superfamily VV_RS11265 PF03772 Competence protein VV_RS11275 PF12704 MacB-like periplasmic core domain VV_RS11275 PF02687 FtsX-like permease family VV_RS11280 PF00005 ABC transporter VV_RS11285 PF02687 FtsX-like permease family VV_RS11285 PF12704 MacB-like periplasmic core domain VV_RS11295 PF02559 CarD-like/TRCF domain VV_RS11295 PF03461 TRCF domain VV_RS11295 PF17757 UvrB interaction domain VV_RS11295 PF00271 Helicase conserved C-terminal domain VV_RS11295 PF00270 DEAD/DEAH box helicase VV_RS11310 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS11315 PF05728 Uncharacterised protein family (UPF0227) VV_RS11325 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VV_RS11325 PF13036 Peptidoglycan-synthase activator LpoB VV_RS11340 PF01230 HIT domain VV_RS11345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS11345 PF00672 HAMP domain VV_RS11355 PF01048 Phosphorylase superfamily VV_RS11360 PF00403 Heavy-metal-associated domain VV_RS11365 PF00571 CBS domain VV_RS11365 PF01743 Poly A polymerase head domain VV_RS11370 PF00990 Diguanylate cyclase, GGDEF domain VV_RS11375 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VV_RS11375 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VV_RS11375 PF01276 Orn/Lys/Arg decarboxylase, major domain VV_RS11380 PF13520 Amino acid permease VV_RS11385 PF18500 CadC C-terminal domain 1 VV_RS11385 PF00486 Transcriptional regulatory protein, C terminal VV_RS11395 PF00672 HAMP domain VV_RS11395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS11395 PF02743 Cache domain VV_RS11405 PF00990 Diguanylate cyclase, GGDEF domain VV_RS11410 PF00571 CBS domain VV_RS11410 PF01769 Divalent cation transporter VV_RS11410 PF03448 MgtE intracellular N domain VV_RS11420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VV_RS11420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VV_RS11425 PF13847 Methyltransferase domain VV_RS11440 PF00245 Alkaline phosphatase VV_RS11450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VV_RS11460 PF03692 Putative zinc- or iron-chelating domain VV_RS11465 PF03692 Putative zinc- or iron-chelating domain VV_RS11470 PF00230 Major intrinsic protein VV_RS11475 PF00486 Transcriptional regulatory protein, C terminal VV_RS11475 PF00072 Response regulator receiver domain VV_RS11480 PF00512 His Kinase A (phospho-acceptor) domain VV_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS11480 PF00672 HAMP domain VV_RS11495 PF13662 Toprim domain VV_RS11495 PF02132 RecR protein VV_RS11500 PF02575 YbaB/EbfC DNA-binding family VV_RS11505 PF12169 DNA polymerase III subunits gamma and tau domain III VV_RS11505 PF12170 DNA polymerase III tau subunit V interacting with alpha VV_RS11505 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VV_RS11510 PF00156 Phosphoribosyl transferase domain VV_RS11520 PF00072 Response regulator receiver domain VV_RS11525 PF03466 LysR substrate binding domain VV_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS11530 PF00156 Phosphoribosyl transferase domain VV_RS11535 PF02674 Colicin V production protein VV_RS11540 PF05036 Sporulation related domain VV_RS11545 PF02875 Mur ligase family, glutamate ligase domain VV_RS11545 PF08245 Mur ligase middle domain VV_RS11550 PF17848 Acetyl-coA carboxylase zinc finger domain VV_RS11550 PF01039 Carboxyl transferase domain VV_RS11555 PF01416 tRNA pseudouridine synthase VV_RS11565 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV_RS11565 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV_RS11570 PF11890 Domain of unknown function (DUF3410) VV_RS11570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV_RS11570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV_RS11575 PF00109 Beta-ketoacyl synthase, N-terminal domain VV_RS11575 PF02801 Beta-ketoacyl synthase, C-terminal domain VV_RS11580 PF01266 FAD dependent oxidoreductase VV_RS11580 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VV_RS11585 PF08891 YfcL protein VV_RS11590 PF04315 Elongation factor P hydroxylase VV_RS11595 PF03458 UPF0126 domain VV_RS11600 PF01264 Chorismate synthase VV_RS11605 PF05175 Methyltransferase small domain VV_RS11610 PF01713 Smr domain VV_RS11615 PF00300 Histidine phosphatase superfamily (branch 1) VV_RS11620 PF05193 Peptidase M16 inactive domain VV_RS11620 PF00675 Insulinase (Peptidase family M16) VV_RS11625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VV_RS11625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VV_RS11625 PF00378 Enoyl-CoA hydratase/isomerase VV_RS11630 PF00108 Thiolase, N-terminal domain VV_RS11630 PF02803 Thiolase, C-terminal domain VV_RS11635 PF04542 Sigma-70 region 2 VV_RS11635 PF08281 Sigma-70, region 4 VV_RS11645 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV_RS11650 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV_RS11655 PF04333 MlaA lipoprotein VV_RS11660 PF03918 Cytochrome C biogenesis protein VV_RS11665 PF03918 Cytochrome C biogenesis protein VV_RS11670 PF08534 Redoxin VV_RS11675 PF01578 Cytochrome C assembly protein VV_RS11675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VV_RS11680 PF03100 CcmE VV_RS11685 PF04995 Heme exporter protein D (CcmD) VV_RS11690 PF01578 Cytochrome C assembly protein VV_RS11695 PF03379 CcmB protein VV_RS11700 PF00005 ABC transporter VV_RS11710 PF01584 CheW-like domain VV_RS11720 PF13614 AAA domain VV_RS11725 PF00072 Response regulator receiver domain VV_RS11725 PF01339 CheB methylesterase VV_RS11730 PF01627 Hpt domain VV_RS11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS11730 PF02895 Signal transducing histidine kinase, homodimeric domain VV_RS11730 PF01584 CheW-like domain VV_RS11730 PF00072 Response regulator receiver domain VV_RS11735 PF04344 Chemotaxis phosphatase, CheZ VV_RS11740 PF00072 Response regulator receiver domain VV_RS11745 PF04545 Sigma-70, region 4 VV_RS11745 PF04539 Sigma-70 region 3 VV_RS11745 PF04542 Sigma-70 region 2 VV_RS11750 PF10609 NUBPL iron-transfer P-loop NTPase VV_RS11755 PF00448 SRP54-type protein, GTPase domain VV_RS11760 PF00771 FHIPEP family VV_RS11765 PF01312 FlhB HrpN YscU SpaS Family VV_RS11770 PF01311 Bacterial export proteins, family 1 VV_RS11775 PF01313 Bacterial export proteins, family 3 VV_RS11780 PF00813 FliP family VV_RS11785 PF04347 Flagellar biosynthesis protein, FliO VV_RS11790 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VV_RS11795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VV_RS11795 PF02154 Flagellar motor switch protein FliM VV_RS11815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV_RS11815 PF18269 T3SS EscN ATPase C-terminal domain VV_RS11825 PF01706 FliG C-terminal domain VV_RS11825 PF14841 FliG middle domain VV_RS11825 PF14842 FliG N-terminal domain VV_RS11830 PF01514 Secretory protein of YscJ/FliF family VV_RS11830 PF08345 Flagellar M-ring protein C-terminal VV_RS11835 PF02049 Flagellar hook-basal body complex protein FliE VV_RS11840 PF02954 Bacterial regulatory protein, Fis family VV_RS11840 PF00072 Response regulator receiver domain VV_RS11840 PF00158 Sigma-54 interaction domain VV_RS11845 PF13188 PAS domain VV_RS11845 PF00512 His Kinase A (phospho-acceptor) domain VV_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS11850 PF06490 Flagellar regulatory protein FleQ VV_RS11850 PF02954 Bacterial regulatory protein, Fis family VV_RS11850 PF00158 Sigma-54 interaction domain VV_RS11855 PF02561 Flagellar protein FliS VV_RS11865 PF07196 Flagellin hook IN motif VV_RS11865 PF02465 Flagellar hook-associated protein 2 N-terminus VV_RS11865 PF07195 Flagellar hook-associated protein 2 C-terminus VV_RS11870 PF03646 FlaG protein VV_RS11875 PF07196 Flagellin hook IN motif VV_RS11875 PF00669 Bacterial flagellin N-terminal helical region VV_RS11875 PF00700 Bacterial flagellin C-terminal helical region VV_RS11880 PF00700 Bacterial flagellin C-terminal helical region VV_RS11880 PF07196 Flagellin hook IN motif VV_RS11880 PF00669 Bacterial flagellin N-terminal helical region VV_RS11885 PF00669 Bacterial flagellin N-terminal helical region VV_RS11885 PF07196 Flagellin hook IN motif VV_RS11885 PF00700 Bacterial flagellin C-terminal helical region VV_RS11890 PF04261 Dyp-type peroxidase family VV_RS11920 PF03960 ArsC family VV_RS11925 PF01546 Peptidase family M20/M25/M40 VV_RS11925 PF07687 Peptidase dimerisation domain VV_RS11940 PF06804 NlpB/DapX lipoprotein VV_RS11945 PF00701 Dihydrodipicolinate synthetase family VV_RS11950 PF01842 ACT domain VV_RS11955 PF00578 AhpC/TSA family VV_RS11960 PF01594 AI-2E family transporter VV_RS11970 PF13181 Tetratricopeptide repeat VV_RS11970 PF01435 Peptidase family M48 VV_RS11975 PF03960 ArsC family VV_RS11980 PF03358 NADPH-dependent FMN reductase VV_RS11995 PF00860 Permease family VV_RS12005 PF02769 AIR synthase related protein, C-terminal domain VV_RS12005 PF00586 AIR synthase related protein, N-terminal domain VV_RS12010 PF00551 Formyl transferase VV_RS12015 PF13230 Glutamine amidotransferases class-II VV_RS12020 PF13580 SIS domain VV_RS12025 PF02770 Acyl-CoA dehydrogenase, middle domain VV_RS12025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VV_RS12025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VV_RS12025 PF09317 Domain of unknown function (DUF1974) VV_RS12055 PF02254 TrkA-N domain VV_RS12055 PF00999 Sodium/hydrogen exchanger family VV_RS12060 PF02525 Flavodoxin-like fold VV_RS12070 PF00929 Exonuclease VV_RS12075 PF00075 RNase H VV_RS12080 PF08241 Methyltransferase domain VV_RS12085 PF00753 Metallo-beta-lactamase superfamily VV_RS12085 PF16123 Hydroxyacylglutathione hydrolase C-terminus VV_RS12090 PF01476 LysM domain VV_RS12090 PF01464 Transglycosylase SLT domain VV_RS12100 PF03372 Endonuclease/Exonuclease/phosphatase family VV_RS12105 PF00543 Nitrogen regulatory protein P-II VV_RS12110 PF00034 Cytochrome c VV_RS12115 PF09179 TilS substrate binding domain VV_RS12115 PF11734 TilS substrate C-terminal domain VV_RS12115 PF01171 PP-loop family VV_RS12120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VV_RS12125 PF02811 PHP domain VV_RS12125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VV_RS12125 PF07733 Bacterial DNA polymerase III alpha NTPase domain VV_RS12125 PF14579 Helix-hairpin-helix motif VV_RS12125 PF01336 OB-fold nucleic acid binding domain VV_RS12130 PF01351 Ribonuclease HII VV_RS12135 PF02684 Lipid-A-disaccharide synthetase VV_RS12140 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VV_RS12140 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS12145 PF07977 FabA-like domain VV_RS12150 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS12150 PF14602 Hexapeptide repeat of succinyl-transferase VV_RS12150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VV_RS12155 PF03938 Outer membrane protein (OmpH-like) VV_RS12160 PF01103 Surface antigen VV_RS12160 PF07244 Surface antigen variable number repeat VV_RS12165 PF02163 Peptidase family M50 VV_RS12165 PF17820 PDZ domain VV_RS12170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VV_RS12170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VV_RS12170 PF13288 DXP reductoisomerase C-terminal domain VV_RS12180 PF01255 Putative undecaprenyl diphosphate synthase VV_RS12185 PF01765 Ribosome recycling factor VV_RS12190 PF00696 Amino acid kinase family VV_RS12195 PF00889 Elongation factor TS VV_RS12200 PF00318 Ribosomal protein S2 VV_RS12205 PF00557 Metallopeptidase family M24 VV_RS12210 PF01909 Nucleotidyltransferase domain VV_RS12210 PF01966 HD domain VV_RS12210 PF08335 GlnD PII-uridylyltransferase VV_RS12215 PF11944 Protein of unknown function (DUF3461) VV_RS12220 PF00849 RNA pseudouridylate synthase VV_RS12225 PF04287 tRNA pseudouridine synthase C VV_RS12255 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VV_RS12260 PF03806 AbgT putative transporter family VV_RS12265 PF00444 Ribosomal protein L36 VV_RS12270 PF01197 Ribosomal protein L31 VV_RS12275 PF18389 TrmO C-terminal domain VV_RS12275 PF01980 tRNA-methyltransferase O VV_RS12280 PF04073 Aminoacyl-tRNA editing domain VV_RS12280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VV_RS12280 PF03129 Anticodon binding domain VV_RS12290 PF06786 Uncharacterised protein family (UPF0253) VV_RS12300 PF00209 Sodium:neurotransmitter symporter family VV_RS12305 PF00041 Fibronectin type III domain VV_RS12305 PF00704 Glycosyl hydrolases family 18 VV_RS12315 PF09382 RQC domain VV_RS12315 PF00270 DEAD/DEAH box helicase VV_RS12315 PF16124 RecQ zinc-binding VV_RS12315 PF00271 Helicase conserved C-terminal domain VV_RS12315 PF00570 HRDC domain VV_RS12320 PF00817 impB/mucB/samB family VV_RS12320 PF11799 impB/mucB/samB family C-terminal domain VV_RS12325 PF00072 Response regulator receiver domain VV_RS12325 PF00990 Diguanylate cyclase, GGDEF domain VV_RS12335 PF02424 ApbE family VV_RS12340 PF00970 Oxidoreductase FAD-binding domain VV_RS12340 PF00111 2Fe-2S iron-sulfur cluster binding domain VV_RS12340 PF00175 Oxidoreductase NAD-binding domain VV_RS12345 PF02508 Rnf-Nqr subunit, membrane protein VV_RS12350 PF02508 Rnf-Nqr subunit, membrane protein VV_RS12355 PF04205 FMN-binding domain VV_RS12360 PF03116 NQR2, RnfD, RnfE family VV_RS12365 PF11973 NQRA C-terminal domain VV_RS12365 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VV_RS12370 PF01722 BolA-like protein VV_RS12375 PF05175 Methyltransferase small domain VV_RS12385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VV_RS12390 PF07690 Major Facilitator Superfamily VV_RS12400 PF04545 Sigma-70, region 4 VV_RS12400 PF04542 Sigma-70 region 2 VV_RS12410 PF03502 Nucleoside-specific channel-forming protein, Tsx VV_RS12415 PF08546 Ketopantoate reductase PanE/ApbA C terminal VV_RS12415 PF02558 Ketopantoate reductase PanE/ApbA VV_RS12420 PF01965 DJ-1/PfpI family VV_RS12425 PF00266 Aminotransferase class-V VV_RS12430 PF02657 Fe-S metabolism associated domain VV_RS12435 PF00899 ThiF family VV_RS12440 PF03562 MltA specific insert domain VV_RS12440 PF06725 3D domain VV_RS12450 PF00696 Amino acid kinase family VV_RS12450 PF00583 Acetyltransferase (GNAT) family VV_RS12460 PF13538 UvrD-like helicase C-terminal domain VV_RS12465 PF12705 PD-(D/E)XK nuclease superfamily VV_RS12465 PF00580 UvrD/REP helicase N-terminal domain VV_RS12465 PF13361 UvrD-like helicase C-terminal domain VV_RS12470 PF17946 RecC C-terminal domain VV_RS12475 PF00884 Sulfatase VV_RS12475 PF11893 Domain of unknown function (DUF3413) VV_RS12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS12485 PF03466 LysR substrate binding domain VV_RS12490 PF07130 YebG protein VV_RS12495 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VV_RS12495 PF14602 Hexapeptide repeat of succinyl-transferase VV_RS12500 PF00230 Major intrinsic protein VV_RS12505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VV_RS12505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VV_RS12510 PF08220 DeoR-like helix-turn-helix domain VV_RS12510 PF00455 DeoR C terminal sensor domain VV_RS12515 PF01266 FAD dependent oxidoreductase VV_RS12515 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VV_RS12520 PF01544 CorA-like Mg2+ transporter protein VV_RS12530 PF08443 RimK-like ATP-grasp domain VV_RS12530 PF02080 TrkA-C domain VV_RS12530 PF18030 RimK PreATP-grasp domain VV_RS12545 PF01588 Putative tRNA binding domain VV_RS12550 PF00356 Bacterial regulatory proteins, lacI family VV_RS12555 PF00672 HAMP domain VV_RS12555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS12555 PF17200 Single Cache domain 2 VV_RS12560 PF01263 Aldose 1-epimerase VV_RS12565 PF08544 GHMP kinases C terminal VV_RS12565 PF10509 Galactokinase galactose-binding signature VV_RS12565 PF00288 GHMP kinases N terminal domain VV_RS12570 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VV_RS12570 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VV_RS12575 PF16363 GDP-mannose 4,6 dehydratase VV_RS12580 PF00356 Bacterial regulatory proteins, lacI family VV_RS12590 PF02837 Glycosyl hydrolases family 2, sugar binding domain VV_RS12590 PF00703 Glycosyl hydrolases family 2 VV_RS12590 PF16353 Domain of unknown function(DUF4981) VV_RS12590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VV_RS12590 PF02929 Beta galactosidase small chain VV_RS12595 PF04074 YhcH/YjgK/YiaL VV_RS12600 PF13520 Amino acid permease VV_RS12605 PF13520 Amino acid permease VV_RS12610 PF01204 Trehalase VV_RS12620 PF03466 LysR substrate binding domain VV_RS12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS12625 PF02417 Chromate transporter VV_RS12645 PF00437 Type II/IV secretion system protein VV_RS12675 PF00263 Bacterial type II and III secretion system protein VV_RS12675 PF04972 BON domain VV_RS12675 PF13629 Pilus formation protein N terminal region VV_RS12705 PF12833 Helix-turn-helix domain VV_RS12705 PF02311 AraC-like ligand binding domain VV_RS12710 PF00501 AMP-binding enzyme VV_RS12715 PF14492 Elongation Factor G, domain II VV_RS12715 PF00679 Elongation factor G C-terminus VV_RS12715 PF03764 Elongation factor G, domain IV VV_RS12715 PF00009 Elongation factor Tu GTP binding domain VV_RS12715 PF03144 Elongation factor Tu domain 2 VV_RS12730 PF00990 Diguanylate cyclase, GGDEF domain VV_RS12730 PF03707 Bacterial signalling protein N terminal repeat VV_RS12730 PF00563 EAL domain VV_RS12735 PF18073 Rubredoxin metal binding domain VV_RS12745 PF18429 Domain of unknown function (DUF5609) VV_RS12755 PF01048 Phosphorylase superfamily VV_RS12760 PF01676 Metalloenzyme superfamily VV_RS12765 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VV_RS12765 PF00591 Glycosyl transferase family, a/b domain VV_RS12765 PF02885 Glycosyl transferase family, helical bundle domain VV_RS12770 PF01791 DeoC/LacD family aldolase VV_RS12775 PF07670 Nucleoside recognition VV_RS12775 PF07662 Na+ dependent nucleoside transporter C-terminus VV_RS12775 PF01773 Na+ dependent nucleoside transporter N-terminus VV_RS12780 PF01026 TatD related DNase VV_RS12785 PF16658 Class II release factor RF3, C-terminal domain VV_RS12785 PF03144 Elongation factor Tu domain 2 VV_RS12785 PF00009 Elongation factor Tu GTP binding domain VV_RS12790 PF08448 PAS fold VV_RS12790 PF00990 Diguanylate cyclase, GGDEF domain VV_RS12795 PF00563 EAL domain VV_RS12795 PF00990 Diguanylate cyclase, GGDEF domain VV_RS12795 PF03707 Bacterial signalling protein N terminal repeat VV_RS12800 PF00583 Acetyltransferase (GNAT) family VV_RS12810 PF13508 Acetyltransferase (GNAT) domain VV_RS12815 PF02036 SCP-2 sterol transfer family VV_RS12820 PF00563 EAL domain VV_RS12820 PF00990 Diguanylate cyclase, GGDEF domain VV_RS12820 PF03707 Bacterial signalling protein N terminal repeat VV_RS12825 PF01136 Peptidase family U32 VV_RS12830 PF01136 Peptidase family U32 VV_RS12835 PF01554 MatE VV_RS12845 PF07719 Tetratricopeptide repeat VV_RS12845 PF13181 Tetratricopeptide repeat VV_RS12850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VV_RS12850 PF00013 KH domain VV_RS12850 PF01138 3' exoribonuclease family, domain 1 VV_RS12850 PF00575 S1 RNA binding domain VV_RS12850 PF03725 3' exoribonuclease family, domain 2 VV_RS12880 PF00312 Ribosomal protein S15 VV_RS12885 PF16198 tRNA pseudouridylate synthase B C-terminal domain VV_RS12885 PF09157 Pseudouridine synthase II TruB, C-terminal VV_RS12885 PF01509 TruB family pseudouridylate synthase (N terminal domain) VV_RS12890 PF02033 Ribosome-binding factor A VV_RS12895 PF08364 Bacterial translation initiation factor IF-2 associated region VV_RS12895 PF04760 Translation initiation factor IF-2, N-terminal region VV_RS12895 PF00009 Elongation factor Tu GTP binding domain VV_RS12895 PF11987 Translation-initiation factor 2 VV_RS12900 PF00575 S1 RNA binding domain VV_RS12900 PF13184 NusA-like KH domain VV_RS12900 PF08529 NusA N-terminal domain VV_RS12905 PF17384 RimP C-terminal SH3 domain VV_RS12905 PF02576 RimP N-terminal domain VV_RS12920 PF03840 Preprotein translocase SecG subunit VV_RS12925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV_RS12925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV_RS12925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV_RS12925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV_RS12930 PF00809 Pterin binding enzyme VV_RS12935 PF06480 FtsH Extracellular VV_RS12935 PF00004 ATPase family associated with various cellular activities (AAA) VV_RS12935 PF17862 AAA+ lid domain VV_RS12935 PF01434 Peptidase family M41 VV_RS12940 PF01728 FtsJ-like methyltransferase VV_RS12945 PF01985 CRS1 / YhbY (CRM) domain VV_RS12950 PF03449 Transcription elongation factor, N-terminal VV_RS12950 PF01272 Transcription elongation factor, GreA/GreB, C-term VV_RS12960 PF13609 Gram-negative porin VV_RS12965 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VV_RS12970 PF04304 Protein of unknown function (DUF454) VV_RS12975 PF00579 tRNA synthetases class I (W and Y) VV_RS12980 PF01551 Peptidase family M23 VV_RS12980 PF04225 Opacity-associated protein A LysM-like domain VV_RS12985 PF00873 AcrB/AcrD/AcrF family VV_RS12990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VV_RS12995 PF01521 Iron-sulphur cluster biosynthesis VV_RS13000 PF00202 Aminotransferase class-III VV_RS13005 PF01594 AI-2E family transporter VV_RS13010 PF08468 Methyltransferase small domain N-terminal VV_RS13010 PF05175 Methyltransferase small domain VV_RS13015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS13015 PF00512 His Kinase A (phospho-acceptor) domain VV_RS13015 PF09308 LuxQ, periplasmic VV_RS13015 PF00072 Response regulator receiver domain VV_RS13020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VV_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS13030 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS13030 PF12911 N-terminal TM domain of oligopeptide transport permease C VV_RS13035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS13035 PF00005 ABC transporter VV_RS13040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VV_RS13040 PF00005 ABC transporter VV_RS13050 PF01869 BadF/BadG/BcrA/BcrD ATPase family VV_RS13055 PF02838 Glycosyl hydrolase family 20, domain 2 VV_RS13055 PF00728 Glycosyl hydrolase family 20, catalytic domain VV_RS13060 PF06165 Glycosyltransferase family 36 VV_RS13060 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VV_RS13065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VV_RS13065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VV_RS13065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VV_RS13065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VV_RS13070 PF08402 TOBE domain VV_RS13070 PF00005 ABC transporter VV_RS13080 PF13416 Bacterial extracellular solute-binding protein VV_RS13085 PF00909 Ammonium Transporter Family VV_RS13090 PF00543 Nitrogen regulatory protein P-II VV_RS13095 PF06062 Uncharacterised protein family (UPF0231) VV_RS13100 PF05651 Putative sugar diacid recognition VV_RS13100 PF17853 GGDEF-like domain VV_RS13100 PF13556 PucR C-terminal helix-turn-helix domain VV_RS13105 PF02447 GntP family permease VV_RS13110 PF02595 Glycerate kinase family VV_RS13115 PF00330 Aconitase family (aconitate hydratase) VV_RS13115 PF06434 Aconitate hydratase 2 N-terminus VV_RS13115 PF11791 Aconitate B N-terminal domain VV_RS13120 PF01734 Patatin-like phospholipase VV_RS13125 PF00912 Transglycosylase VV_RS13125 PF00905 Penicillin binding protein transpeptidase domain VV_RS13125 PF14814 Bifunctional transglycosylase second domain VV_RS13130 PF00270 DEAD/DEAH box helicase VV_RS13130 PF00271 Helicase conserved C-terminal domain VV_RS13130 PF04408 Helicase associated domain (HA2) VV_RS13130 PF08482 ATP-dependent helicase C-terminal VV_RS13135 PF17746 SfsA N-terminal OB domain VV_RS13135 PF03749 Sugar fermentation stimulation protein RE domain VV_RS13140 PF01258 Prokaryotic dksA/traR C4-type zinc finger VV_RS13145 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV_RS13150 PF12627 Probable RNA and SrmB- binding site of polymerase A VV_RS13150 PF12626 Polymerase A arginine-rich C-terminus VV_RS13150 PF01743 Poly A polymerase head domain VV_RS13155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VV_RS13160 PF02548 Ketopantoate hydroxymethyltransferase VV_RS13165 PF02569 Pantoate-beta-alanine ligase VV_RS13170 PF01061 ABC-2 type transporter VV_RS13175 PF00005 ABC transporter VV_RS13180 PF00916 Sulfate permease family VV_RS13180 PF01740 STAS domain VV_RS13185 PF00484 Carbonic anhydrase VV_RS13190 PF00156 Phosphoribosyl transferase domain VV_RS13195 PF00440 Bacterial regulatory proteins, tetR family VV_RS13200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV_RS13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS13205 PF02817 e3 binding domain VV_RS13205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VV_RS13205 PF00364 Biotin-requiring enzyme VV_RS13210 PF17831 Pyruvate dehydrogenase E1 component middle domain VV_RS13210 PF00456 Transketolase, thiamine diphosphate binding domain VV_RS13215 PF00392 Bacterial regulatory proteins, gntR family VV_RS13215 PF07729 FCD domain VV_RS13220 PF01510 N-acetylmuramoyl-L-alanine amidase VV_RS13225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VV_RS13225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VV_RS13230 PF00114 Pilin (bacterial filament) VV_RS13230 PF07963 Prokaryotic N-terminal methylation motif VV_RS13235 PF00437 Type II/IV secretion system protein VV_RS13235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VV_RS13240 PF00482 Type II secretion system (T2SS), protein F VV_RS13245 PF01478 Type IV leader peptidase family VV_RS13245 PF06750 Bacterial Peptidase A24 N-terminal domain VV_RS13250 PF01121 Dephospho-CoA kinase VV_RS13255 PF07072 Cell division protein VV_RS13260 PF03884 DNA gyrase inhibitor YacG VV_RS13265 PF01245 Ribosomal protein L19 VV_RS13270 PF01746 tRNA (Guanine-1)-methyltransferase VV_RS13275 PF05239 PRC-barrel domain VV_RS13275 PF01782 RimM N-terminal domain VV_RS13280 PF00886 Ribosomal protein S16 VV_RS13285 PF00448 SRP54-type protein, GTPase domain VV_RS13285 PF02978 Signal peptide binding domain VV_RS13285 PF02881 SRP54-type protein, helical bundle domain VV_RS13290 PF01578 Cytochrome C assembly protein VV_RS13295 PF03471 Transporter associated domain VV_RS13295 PF01595 Cyclin M transmembrane N-terminal domain VV_RS13295 PF00571 CBS domain VV_RS13300 PF02664 S-Ribosylhomocysteinase (LuxS) VV_RS13310 PF04262 Glutamate-cysteine ligase VV_RS13315 PF00675 Insulinase (Peptidase family M16) VV_RS13315 PF05193 Peptidase M16 inactive domain VV_RS13320 PF09335 SNARE associated Golgi protein VV_RS13325 PF08240 Alcohol dehydrogenase GroES-like domain VV_RS13325 PF00107 Zinc-binding dehydrogenase VV_RS13330 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VV_RS13335 PF00364 Biotin-requiring enzyme VV_RS13335 PF02436 Conserved carboxylase domain VV_RS13335 PF00682 HMGL-like VV_RS13340 PF04277 Oxaloacetate decarboxylase, gamma chain VV_RS13385 PF02599 Global regulator protein family VV_RS13390 PF01842 ACT domain VV_RS13390 PF13840 ACT domain VV_RS13390 PF00696 Amino acid kinase family VV_RS13395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VV_RS13395 PF02272 DHHA1 domain VV_RS13395 PF01411 tRNA synthetases class II (A) VV_RS13400 PF02631 RecX family VV_RS13405 PF00154 recA bacterial DNA recombination protein VV_RS13410 PF02464 Competence-damaged protein VV_RS13415 PF05188 MutS domain II VV_RS13415 PF05192 MutS domain III VV_RS13415 PF01624 MutS domain I VV_RS13415 PF00488 MutS domain V VV_RS13415 PF05190 MutS family domain IV VV_RS13420 PF04545 Sigma-70, region 4 VV_RS13420 PF04539 Sigma-70 region 3 VV_RS13420 PF04542 Sigma-70 region 2 VV_RS13420 PF00140 Sigma-70 factor, region 1.2 VV_RS13425 PF01476 LysM domain VV_RS13425 PF01551 Peptidase family M23 VV_RS13435 PF01975 Survival protein SurE VV_RS13440 PF01142 tRNA pseudouridine synthase D (TruD) VV_RS13445 PF02542 YgbB family VV_RS13450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VV_RS13455 PF04977 Septum formation initiator VV_RS13460 PF03952 Enolase, N-terminal domain VV_RS13460 PF00113 Enolase, C-terminal TIM barrel domain VV_RS13465 PF06418 CTP synthase N-terminus VV_RS13465 PF00117 Glutamine amidotransferase class-I VV_RS13470 PF03819 MazG nucleotide pyrophosphohydrolase domain VV_RS13475 PF13291 ACT domain VV_RS13475 PF04607 Region found in RelA / SpoT proteins VV_RS13475 PF02824 TGS domain VV_RS13480 PF05958 tRNA (Uracil-5-)-methyltransferase VV_RS13480 PF01938 TRAM domain VV_RS13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS13485 PF00512 His Kinase A (phospho-acceptor) domain VV_RS13485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VV_RS13485 PF01627 Hpt domain VV_RS13485 PF00672 HAMP domain VV_RS13485 PF00072 Response regulator receiver domain VV_RS13490 PF03707 Bacterial signalling protein N terminal repeat VV_RS13490 PF00563 EAL domain VV_RS13490 PF00990 Diguanylate cyclase, GGDEF domain VV_RS13505 PF01648 4'-phosphopantetheinyl transferase superfamily VV_RS13510 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VV_RS13515 PF02565 Recombination protein O C terminal VV_RS13515 PF11967 Recombination protein O N terminal VV_RS13520 PF01926 50S ribosome-binding GTPase VV_RS13520 PF07650 KH domain VV_RS13525 PF14622 Ribonuclease-III-like VV_RS13525 PF00035 Double-stranded RNA binding motif VV_RS13530 PF10502 Signal peptidase, peptidase S26 VV_RS13535 PF00009 Elongation factor Tu GTP binding domain VV_RS13535 PF06421 GTP-binding protein LepA C-terminus VV_RS13535 PF03144 Elongation factor Tu domain 2 VV_RS13535 PF00679 Elongation factor G C-terminus VV_RS13545 PF03888 MucB/RseB N-terminal domain VV_RS13545 PF17188 MucB/RseB C-terminal domain VV_RS13550 PF03873 Anti sigma-E protein RseA, C-terminal domain VV_RS13550 PF03872 Anti sigma-E protein RseA, N-terminal domain VV_RS13555 PF08281 Sigma-70, region 4 VV_RS13555 PF04542 Sigma-70 region 2 VV_RS13560 PF02910 Fumarate reductase flavoprotein C-term VV_RS13560 PF00890 FAD binding domain VV_RS13570 PF03937 Flavinator of succinate dehydrogenase VV_RS13575 PF01571 Aminomethyltransferase folate-binding domain VV_RS13590 PF01494 FAD binding domain VV_RS13595 PF01494 FAD binding domain VV_RS13600 PF03695 Uncharacterised protein family (UPF0149) VV_RS13605 PF05164 Cell division protein ZapA VV_RS13610 PF01812 5-formyltetrahydrofolate cyclo-ligase family VV_RS13615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VV_RS13620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV_RS13620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV_RS13620 PF01842 ACT domain VV_RS13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS13630 PF03466 LysR substrate binding domain VV_RS13635 PF01810 LysE type translocator VV_RS13640 PF05552 Conserved TM helix VV_RS13640 PF00924 Mechanosensitive ion channel VV_RS13645 PF01116 Fructose-bisphosphate aldolase class-II VV_RS13650 PF00162 Phosphoglycerate kinase VV_RS13655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV_RS13655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV_RS13665 PF02779 Transketolase, pyrimidine binding domain VV_RS13665 PF02780 Transketolase, C-terminal domain VV_RS13665 PF00456 Transketolase, thiamine diphosphate binding domain VV_RS13670 PF02773 S-adenosylmethionine synthetase, C-terminal domain VV_RS13670 PF00438 S-adenosylmethionine synthetase, N-terminal domain VV_RS13670 PF02772 S-adenosylmethionine synthetase, central domain VV_RS13680 PF17283 SprT-like zinc ribbon domain VV_RS13680 PF10263 SprT-like family VV_RS13685 PF04231 Endonuclease I VV_RS13690 PF04452 RNA methyltransferase VV_RS13695 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VV_RS13695 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VV_RS13700 PF02622 Uncharacterized ACR, COG1678 VV_RS13705 PF03652 Holliday junction resolvase VV_RS13710 PF00437 Type II/IV secretion system protein VV_RS13715 PF00437 Type II/IV secretion system protein VV_RS13720 PF01168 Alanine racemase, N-terminal domain VV_RS13725 PF03807 NADP oxidoreductase coenzyme F420-dependent VV_RS13725 PF14748 Pyrroline-5-carboxylate reductase dimerisation VV_RS13730 PF02325 YGGT family VV_RS13735 PF02594 Uncharacterised ACR, YggU family COG1872 VV_RS13745 PF01725 Ham1 family VV_RS13750 PF04055 Radical SAM superfamily VV_RS13750 PF06969 HemN C-terminal domain VV_RS13760 PF04960 Glutaminase VV_RS13765 PF02390 Putative methyltransferase VV_RS13770 PF00633 Helix-hairpin-helix motif VV_RS13770 PF14815 NUDIX domain VV_RS13770 PF00730 HhH-GPD superfamily base excision DNA repair protein VV_RS13775 PF04362 Bacterial Fe(2+) trafficking VV_RS13780 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VV_RS13780 PF01464 Transglycosylase SLT domain VV_RS13800 PF17200 Single Cache domain 2 VV_RS13800 PF00672 HAMP domain VV_RS13800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS13915 PF00072 Response regulator receiver domain VV_RS13925 PF00356 Bacterial regulatory proteins, lacI family VV_RS13930 PF04794 YdjC-like protein VV_RS13935 PF02056 Family 4 glycosyl hydrolase VV_RS13935 PF11975 Family 4 glycosyl hydrolase C-terminal domain VV_RS13940 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VV_RS13945 PF02378 Phosphotransferase system, EIIC VV_RS13950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VV_RS13955 PF01522 Polysaccharide deacetylase VV_RS13970 PF03739 Lipopolysaccharide export system permease LptF/LptG VV_RS13975 PF03739 Lipopolysaccharide export system permease LptF/LptG VV_RS13980 PF00883 Cytosol aminopeptidase family, catalytic domain VV_RS13980 PF02789 Cytosol aminopeptidase family, N-terminal domain VV_RS13985 PF04364 DNA polymerase III chi subunit, HolC VV_RS13990 PF08264 Anticodon-binding domain of tRNA VV_RS13990 PF00133 tRNA synthetases class I (I, L, M and V) VV_RS13990 PF10458 Valyl tRNA synthetase tRNA binding arm VV_RS14000 PF05987 Bacterial protein of unknown function (DUF898) VV_RS14010 PF00583 Acetyltransferase (GNAT) family VV_RS14020 PF06877 Regulator of ribonuclease activity B VV_RS14030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VV_RS14030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VV_RS14035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VV_RS14035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VV_RS14040 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VV_RS14040 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VV_RS14045 PF01042 Endoribonuclease L-PSP VV_RS14050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV_RS14050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV_RS14055 PF00849 RNA pseudouridylate synthase VV_RS14060 PF00271 Helicase conserved C-terminal domain VV_RS14060 PF12137 RNA polymerase recycling family C-terminal VV_RS14060 PF18337 RapA N-terminal Tudor like domain VV_RS14060 PF00176 SNF2 family N-terminal domain VV_RS14060 PF18339 RapA N-terminal Tudor like domain 1 VV_RS14065 PF13638 PIN domain VV_RS14065 PF02562 PhoH-like protein VV_RS14070 PF01523 Putative modulator of DNA gyrase VV_RS14075 PF00795 Carbon-nitrogen hydrolase VV_RS14080 PF13502 AsmA-like C-terminal region VV_RS14080 PF13116 Protein of unknown function VV_RS14085 PF10150 Ribonuclease E/G family VV_RS14085 PF00575 S1 RNA binding domain VV_RS14090 PF02545 Maf-like protein VV_RS14095 PF04093 rod shape-determining protein MreD VV_RS14100 PF04085 rod shape-determining protein MreC VV_RS14135 PF07963 Prokaryotic N-terminal methylation motif VV_RS14140 PF07963 Prokaryotic N-terminal methylation motif VV_RS14150 PF00482 Type II secretion system (T2SS), protein F VV_RS14155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VV_RS14155 PF00437 Type II/IV secretion system protein VV_RS14165 PF01471 Putative peptidoglycan binding domain VV_RS14165 PF13401 AAA domain VV_RS14170 PF03958 Bacterial type II/III secretion system short domain VV_RS14170 PF07660 Secretin and TonB N terminus short domain VV_RS14170 PF11741 AMIN domain VV_RS14170 PF00263 Bacterial type II and III secretion system protein VV_RS14190 PF00990 Diguanylate cyclase, GGDEF domain VV_RS14190 PF00563 EAL domain VV_RS14190 PF17157 Gammaproteobacterial periplasmic sensor domain VV_RS14195 PF00436 Single-strand binding protein family VV_RS14200 PF00196 Bacterial regulatory proteins, luxR family VV_RS14205 PF00483 Nucleotidyl transferase VV_RS14210 PF17760 UvrA interaction domain VV_RS14210 PF17755 UvrA DNA-binding domain VV_RS14210 PF00005 ABC transporter VV_RS14220 PF00266 Aminotransferase class-V VV_RS14225 PF01842 ACT domain VV_RS14225 PF00696 Amino acid kinase family VV_RS14230 PF02965 Vitamin B12 dependent methionine synthase, activation domain VV_RS14230 PF02607 B12 binding domain VV_RS14230 PF00809 Pterin binding enzyme VV_RS14230 PF02574 Homocysteine S-methyltransferase VV_RS14230 PF02310 B12 binding domain VV_RS14235 PF00999 Sodium/hydrogen exchanger family VV_RS14240 PF00072 Response regulator receiver domain VV_RS14240 PF00990 Diguanylate cyclase, GGDEF domain VV_RS14285 PF01507 Phosphoadenosine phosphosulfate reductase family VV_RS14290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VV_RS14290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VV_RS14295 PF00258 Flavodoxin VV_RS14295 PF00667 FAD binding domain VV_RS14295 PF00175 Oxidoreductase NAD-binding domain VV_RS14315 PF01207 Dihydrouridine synthase (Dus) VV_RS14320 PF01475 Ferric uptake regulator family VV_RS14330 PF00342 Phosphoglucose isomerase VV_RS14335 PF01894 Uncharacterised protein family UPF0047 VV_RS14345 PF01168 Alanine racemase, N-terminal domain VV_RS14345 PF00842 Alanine racemase, C-terminal domain VV_RS14350 PF00772 DnaB-like helicase N terminal domain VV_RS14350 PF03796 DnaB-like helicase C terminal domain VV_RS14360 PF03948 Ribosomal protein L9, C-terminal domain VV_RS14360 PF01281 Ribosomal protein L9, N-terminal domain VV_RS14365 PF01084 Ribosomal protein S18 VV_RS14370 PF00436 Single-strand binding protein family VV_RS14375 PF01250 Ribosomal protein S6 VV_RS14380 PF00834 Ribulose-phosphate 3 epimerase family VV_RS14385 PF02086 D12 class N6 adenine-specific DNA methyltransferase VV_RS14395 PF01761 3-dehydroquinate synthase VV_RS14400 PF01202 Shikimate kinase VV_RS14405 PF11741 AMIN domain VV_RS14405 PF03958 Bacterial type II/III secretion system short domain VV_RS14405 PF07660 Secretin and TonB N terminus short domain VV_RS14405 PF00263 Bacterial type II and III secretion system protein VV_RS14430 PF00905 Penicillin binding protein transpeptidase domain VV_RS14430 PF00912 Transglycosylase VV_RS14430 PF17092 Penicillin-binding protein OB-like domain VV_RS14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS14435 PF03466 LysR substrate binding domain VV_RS14445 PF00206 Lyase VV_RS14445 PF00583 Acetyltransferase (GNAT) family VV_RS14445 PF14698 Argininosuccinate lyase C-terminal VV_RS14450 PF00764 Arginosuccinate synthase VV_RS14455 PF00696 Amino acid kinase family VV_RS14460 PF02774 Semialdehyde dehydrogenase, dimerisation domain VV_RS14460 PF01118 Semialdehyde dehydrogenase, NAD binding domain VV_RS14465 PF07687 Peptidase dimerisation domain VV_RS14465 PF01546 Peptidase family M20/M25/M40 VV_RS14470 PF00311 Phosphoenolpyruvate carboxylase VV_RS14480 PF02219 Methylenetetrahydrofolate reductase VV_RS14485 PF00742 Homoserine dehydrogenase VV_RS14485 PF03447 Homoserine dehydrogenase, NAD binding domain VV_RS14485 PF00696 Amino acid kinase family VV_RS14490 PF01053 Cys/Met metabolism PLP-dependent enzyme VV_RS14495 PF01340 Met Apo-repressor, MetJ VV_RS14500 PF03949 Malic enzyme, NAD binding domain VV_RS14500 PF00390 Malic enzyme, N-terminal domain VV_RS14505 PF01197 Ribosomal protein L31 VV_RS14510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VV_RS14510 PF18074 Primosomal protein N C-terminal domain VV_RS14510 PF17764 3′ DNA-binding domain (3′BD) VV_RS14510 PF00270 DEAD/DEAH box helicase VV_RS14510 PF00271 Helicase conserved C-terminal domain VV_RS14515 PF00356 Bacterial regulatory proteins, lacI family VV_RS14525 PF00227 Proteasome subunit VV_RS14530 PF07724 AAA domain (Cdc48 subfamily) VV_RS14530 PF00004 ATPase family associated with various cellular activities (AAA) VV_RS14530 PF10431 C-terminal, D2-small domain, of ClpB protein VV_RS14535 PF01040 UbiA prenyltransferase family VV_RS14540 PF03737 Aldolase/RraA VV_RS14545 PF06005 Cell division protein ZapB VV_RS14555 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VV_RS14580 PF00121 Triosephosphate isomerase VV_RS14585 PF16363 GDP-mannose 4,6 dehydratase VV_RS14590 PF00210 Ferritin-like domain VV_RS14595 PF04324 BFD-like [2Fe-2S] binding domain VV_RS14600 PF00009 Elongation factor Tu GTP binding domain VV_RS14600 PF03144 Elongation factor Tu domain 2 VV_RS14600 PF03143 Elongation factor Tu C-terminal domain VV_RS14605 PF00679 Elongation factor G C-terminus VV_RS14605 PF00009 Elongation factor Tu GTP binding domain VV_RS14605 PF03144 Elongation factor Tu domain 2 VV_RS14605 PF14492 Elongation Factor G, domain II VV_RS14605 PF03764 Elongation factor G, domain IV VV_RS14610 PF00177 Ribosomal protein S7p/S5e VV_RS14615 PF00164 Ribosomal protein S12/S23 VV_RS14620 PF04077 DsrH like protein VV_RS14625 PF02635 DsrE/DsrF-like family VV_RS14630 PF02635 DsrE/DsrF-like family VV_RS14635 PF13309 HTH domain VV_RS14635 PF08348 YheO-like PAS domain VV_RS14640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV_RS14640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VV_RS14650 PF04102 SlyX VV_RS14655 PF01112 Asparaginase VV_RS14660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VV_RS14670 PF00999 Sodium/hydrogen exchanger family VV_RS14670 PF02254 TrkA-N domain VV_RS14675 PF02525 Flavodoxin-like fold VV_RS14680 PF00005 ABC transporter VV_RS14680 PF12848 ABC transporter VV_RS14690 PF00561 alpha/beta hydrolase fold VV_RS14695 PF06794 Uncharacterised protein family (UPF0270) VV_RS14700 PF00485 Phosphoribulokinase / Uridine kinase family VV_RS14705 PF13545 Crp-like helix-turn-helix domain VV_RS14705 PF00027 Cyclic nucleotide-binding domain VV_RS14715 PF00171 Aldehyde dehydrogenase family VV_RS14720 PF04958 Arginine N-succinyltransferase beta subunit VV_RS14725 PF00202 Aminotransferase class-III VV_RS14730 PF00117 Glutamine amidotransferase class-I VV_RS14745 PF00579 tRNA synthetases class I (W and Y) VV_RS14750 PF13419 Haloacid dehalogenase-like hydrolase VV_RS14755 PF00588 SpoU rRNA Methylase family VV_RS14755 PF08032 RNA 2'-O ribose methyltransferase substrate binding VV_RS14760 PF00575 S1 RNA binding domain VV_RS14760 PF00773 RNB domain VV_RS14760 PF17876 Cold shock domain VV_RS14760 PF08206 Ribonuclease B OB domain VV_RS14760 PF08461 Ribonuclease R winged-helix domain VV_RS14765 PF01979 Amidohydrolase family VV_RS14770 PF02082 Transcriptional regulator VV_RS14775 PF00970 Oxidoreductase FAD-binding domain VV_RS14775 PF00175 Oxidoreductase NAD-binding domain VV_RS14775 PF00042 Globin VV_RS14780 PF08238 Sel1 repeat VV_RS14785 PF00709 Adenylosuccinate synthetase VV_RS14790 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VV_RS14795 PF01145 SPFH domain / Band 7 family VV_RS14800 PF01145 SPFH domain / Band 7 family VV_RS14800 PF12221 Bacterial membrane protein N terminal VV_RS14805 PF13167 GTP-binding GTPase N-terminal VV_RS14805 PF16360 GTP-binding GTPase Middle Region VV_RS14805 PF01926 50S ribosome-binding GTPase VV_RS14810 PF17209 Hfq protein VV_RS14820 PF08676 MutL C terminal dimerisation domain VV_RS14820 PF01119 DNA mismatch repair protein, C-terminal domain VV_RS14825 PF01520 N-acetylmuramoyl-L-alanine amidase VV_RS14830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VV_RS14835 PF08331 Domain of unknown function (DUF1730) VV_RS14895 PF00929 Exonuclease VV_RS14900 PF03193 RsgA GTPase VV_RS14905 PF02666 Phosphatidylserine decarboxylase VV_RS14910 PF00939 Sodium:sulfate symporter transmembrane region VV_RS14920 PF01676 Metalloenzyme superfamily VV_RS14920 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VV_RS14930 PF00581 Rhodanese-like domain VV_RS14935 PF02556 Preprotein translocase subunit SecB VV_RS14940 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VV_RS14940 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VV_RS14945 PF06426 Serine acetyltransferase, N-terminal VV_RS14945 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS14950 PF01551 Peptidase family M23 VV_RS14955 PF01609 Transposase DDE domain VV_RS14955 PF13006 Insertion element 4 transposase N-terminal VV_RS14965 PF00440 Bacterial regulatory proteins, tetR family VV_RS14965 PF08360 QacR-like protein, C-terminal region VV_RS14975 PF00152 tRNA synthetases class II (D, K and N) VV_RS14980 PF02910 Fumarate reductase flavoprotein C-term VV_RS14980 PF00890 FAD binding domain VV_RS14985 PF13085 2Fe-2S iron-sulfur cluster binding domain VV_RS14985 PF13183 4Fe-4S dicluster domain VV_RS14990 PF02300 Fumarate reductase subunit C VV_RS14995 PF02313 Fumarate reductase subunit D VV_RS15005 PF08207 Elongation factor P (EF-P) KOW-like domain VV_RS15005 PF01132 Elongation factor P (EF-P) OB domain VV_RS15005 PF09285 Elongation factor P, C-terminal VV_RS15010 PF04055 Radical SAM superfamily VV_RS15015 PF02308 MgtC family VV_RS15025 PF00118 TCP-1/cpn60 chaperonin family VV_RS15030 PF00166 Chaperonin 10 Kd subunit VV_RS15035 PF01554 MatE VV_RS15040 PF00365 Phosphofructokinase VV_RS15045 PF01545 Cation efflux family VV_RS15045 PF16916 Dimerisation domain of Zinc Transporter VV_RS15050 PF07813 LTXXQ motif family protein VV_RS15055 PF00072 Response regulator receiver domain VV_RS15055 PF00486 Transcriptional regulatory protein, C terminal VV_RS15060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS15060 PF00512 His Kinase A (phospho-acceptor) domain VV_RS15060 PF00672 HAMP domain VV_RS15060 PF16527 Two-component sensor protein CpxA, periplasmic domain VV_RS15065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VV_RS15065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VV_RS15070 PF00588 SpoU rRNA Methylase family VV_RS15075 PF04186 FxsA cytoplasmic membrane protein VV_RS15080 PF10415 Fumarase C C-terminus VV_RS15080 PF00206 Lyase VV_RS15085 PF03605 Anaerobic c4-dicarboxylate membrane transporter VV_RS15090 PF02683 Cytochrome C biogenesis protein transmembrane region VV_RS15090 PF11412 Disulphide bond corrector protein DsbC VV_RS15095 PF00196 Bacterial regulatory proteins, luxR family VV_RS15095 PF00072 Response regulator receiver domain VV_RS15100 PF01914 MarC family integral membrane protein VV_RS15110 PF00474 Sodium:solute symporter family VV_RS15130 PF00512 His Kinase A (phospho-acceptor) domain VV_RS15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS15130 PF00672 HAMP domain VV_RS15130 PF00072 Response regulator receiver domain VV_RS15130 PF01627 Hpt domain VV_RS15135 PF12832 MFS_1 like family VV_RS15150 PF00501 AMP-binding enzyme VV_RS15150 PF16177 Acetyl-coenzyme A synthetase N-terminus VV_RS15150 PF13193 AMP-binding enzyme C-terminal domain VV_RS15155 PF01220 Dehydroquinase class II VV_RS15160 PF00364 Biotin-requiring enzyme VV_RS15165 PF02785 Biotin carboxylase C-terminal domain VV_RS15165 PF00289 Biotin carboxylase, N-terminal domain VV_RS15165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VV_RS15175 PF01207 Dihydrouridine synthase (Dus) VV_RS15180 PF02954 Bacterial regulatory protein, Fis family VV_RS15185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VV_RS15185 PF17200 Single Cache domain 2 VV_RS15185 PF00672 HAMP domain VV_RS15190 PF13411 MerR HTH family regulatory protein VV_RS15195 PF01808 AICARFT/IMPCHase bienzyme VV_RS15195 PF02142 MGS-like domain VV_RS15200 PF02843 Phosphoribosylglycinamide synthetase, C domain VV_RS15200 PF02844 Phosphoribosylglycinamide synthetase, N domain VV_RS15200 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VV_RS15210 PF00216 Bacterial DNA-binding protein VV_RS15215 PF00571 CBS domain VV_RS15215 PF01595 Cyclin M transmembrane N-terminal domain VV_RS15220 PF04222 Protein of unknown function (DUF416) VV_RS15225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VV_RS15225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VV_RS15230 PF03167 Uracil DNA glycosylase superfamily VV_RS15235 PF01208 Uroporphyrinogen decarboxylase (URO-D) VV_RS15250 PF09297 NADH pyrophosphatase zinc ribbon domain VV_RS15250 PF00293 NUDIX domain VV_RS15255 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VV_RS15260 PF04983 RNA polymerase Rpb1, domain 3 VV_RS15260 PF00623 RNA polymerase Rpb1, domain 2 VV_RS15260 PF04998 RNA polymerase Rpb1, domain 5 VV_RS15260 PF04997 RNA polymerase Rpb1, domain 1 VV_RS15260 PF05000 RNA polymerase Rpb1, domain 4 VV_RS15265 PF04563 RNA polymerase beta subunit VV_RS15265 PF04560 RNA polymerase Rpb2, domain 7 VV_RS15265 PF04561 RNA polymerase Rpb2, domain 2 VV_RS15265 PF04565 RNA polymerase Rpb2, domain 3 VV_RS15265 PF10385 RNA polymerase beta subunit external 1 domain VV_RS15265 PF00562 RNA polymerase Rpb2, domain 6 VV_RS15270 PF00542 Ribosomal protein L7/L12 C-terminal domain VV_RS15270 PF16320 Ribosomal protein L7/L12 dimerisation domain VV_RS15275 PF00466 Ribosomal protein L10 VV_RS15280 PF00687 Ribosomal protein L1p/L10e family VV_RS15285 PF03946 Ribosomal protein L11, N-terminal domain VV_RS15285 PF00298 Ribosomal protein L11, RNA binding domain VV_RS15290 PF00467 KOW motif VV_RS15290 PF02357 Transcription termination factor nusG VV_RS15295 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VV_RS15300 PF03143 Elongation factor Tu C-terminal domain VV_RS15300 PF03144 Elongation factor Tu domain 2 VV_RS15300 PF00009 Elongation factor Tu GTP binding domain VV_RS15325 PF00485 Phosphoribulokinase / Uridine kinase family VV_RS15330 PF02237 Biotin protein ligase C terminal domain VV_RS15330 PF03099 Biotin/lipoate A/B protein ligase family VV_RS15330 PF08279 HTH domain VV_RS15335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VV_RS15335 PF01565 FAD binding domain VV_RS15345 PF13091 PLD-like domain VV_RS15355 PF13358 DDE superfamily endonuclease VV_RS15400 PF00175 Oxidoreductase NAD-binding domain VV_RS15405 PF00111 2Fe-2S iron-sulfur cluster binding domain VV_RS15405 PF00970 Oxidoreductase FAD-binding domain VV_RS15405 PF00175 Oxidoreductase NAD-binding domain VV_RS15410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VV_RS15420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV_RS15420 PF07497 Rho termination factor, RNA-binding domain VV_RS15420 PF07498 Rho termination factor, N-terminal domain VV_RS15425 PF00085 Thioredoxin VV_RS15430 PF00271 Helicase conserved C-terminal domain VV_RS15430 PF00270 DEAD/DEAH box helicase VV_RS15435 PF02541 Ppx/GppA phosphatase family VV_RS15440 PF02592 Putative vitamin uptake transporter VV_RS15450 PF09382 RQC domain VV_RS15450 PF00570 HRDC domain VV_RS15450 PF00270 DEAD/DEAH box helicase VV_RS15450 PF00271 Helicase conserved C-terminal domain VV_RS15450 PF16124 RecQ zinc-binding VV_RS15455 PF00892 EamA-like transporter family VV_RS15465 PF01810 LysE type translocator VV_RS15470 PF13361 UvrD-like helicase C-terminal domain VV_RS15470 PF00580 UvrD/REP helicase N-terminal domain VV_RS15480 PF05114 Protein of unknown function (DUF692) VV_RS15500 PF07690 Major Facilitator Superfamily VV_RS15505 PF03466 LysR substrate binding domain VV_RS15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS15510 PF00557 Metallopeptidase family M24 VV_RS15510 PF01321 Creatinase/Prolidase N-terminal domain VV_RS15510 PF01321 Creatinase/Prolidase N-terminal domain VV_RS15510 PF00557 Metallopeptidase family M24 VV_RS15515 PF06968 Biotin and Thiamin Synthesis associated domain VV_RS15515 PF04055 Radical SAM superfamily VV_RS15520 PF05690 Thiazole biosynthesis protein ThiG VV_RS15530 PF00899 ThiF family VV_RS15535 PF02581 Thiamine monophosphate synthase VV_RS15540 PF13667 ThiC-associated domain VV_RS15540 PF01964 Radical SAM ThiC family VV_RS15545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VV_RS15550 PF07732 Multicopper oxidase VV_RS15550 PF00394 Multicopper oxidase VV_RS15550 PF07731 Multicopper oxidase VV_RS15590 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS15595 PF07369 Protein of unknown function (DUF1488) VV_RS15600 PF01488 Shikimate / quinate 5-dehydrogenase VV_RS15600 PF08501 Shikimate dehydrogenase substrate binding domain VV_RS15600 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VV_RS15605 PF01218 Coproporphyrinogen III oxidase VV_RS15610 PF01300 Telomere recombination VV_RS15615 PF00731 AIR carboxylase VV_RS15620 PF02222 ATP-grasp domain VV_RS15620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VV_RS15625 PF13006 Insertion element 4 transposase N-terminal VV_RS15625 PF01609 Transposase DDE domain VV_RS15630 PF01396 Topoisomerase DNA binding C4 zinc finger VV_RS15635 PF04361 Protein of unknown function (DUF494) VV_RS15640 PF02481 DNA recombination-mediator protein A VV_RS15640 PF17782 DprA winged helix domain VV_RS15650 PF01327 Polypeptide deformylase VV_RS15655 PF02911 Formyl transferase, C-terminal domain VV_RS15655 PF00551 Formyl transferase VV_RS15660 PF01029 NusB family VV_RS15660 PF01189 16S rRNA methyltransferase RsmB/F VV_RS15665 PF02254 TrkA-N domain VV_RS15665 PF02080 TrkA-C domain VV_RS15670 PF02386 Cation transport protein VV_RS15675 PF03006 Haemolysin-III related VV_RS15680 PF07070 SpoOM protein VV_RS15685 PF06288 Protein of unknown function (DUF1040) VV_RS15690 PF12801 4Fe-4S binding domain VV_RS15690 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VV_RS15690 PF13746 4Fe-4S dicluster domain VV_RS15695 PF01636 Phosphotransferase enzyme family VV_RS15700 PF01323 DSBA-like thioredoxin domain VV_RS15705 PF01553 Acyltransferase VV_RS15715 PF13335 Magnesium chelatase, subunit ChlI C-terminal VV_RS15715 PF01078 Magnesium chelatase, subunit ChlI VV_RS15720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VV_RS15720 PF00205 Thiamine pyrophosphate enzyme, central domain VV_RS15720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VV_RS15730 PF01063 Amino-transferase class IV VV_RS15735 PF00920 Dehydratase family VV_RS15740 PF00291 Pyridoxal-phosphate dependent enzyme VV_RS15740 PF00585 C-terminal regulatory domain of Threonine dehydratase VV_RS15745 PF03466 LysR substrate binding domain VV_RS15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VV_RS15750 PF07690 Major Facilitator Superfamily VV_RS15755 PF00497 Bacterial extracellular solute-binding proteins, family 3 VV_RS15760 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS15765 PF12804 MobA-like NTP transferase domain VV_RS15765 PF00132 Bacterial transferase hexapeptide (six repeats) VV_RS15770 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VV_RS15770 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VV_RS15775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV_RS15775 PF02874 ATP synthase alpha/beta family, beta-barrel domain VV_RS15780 PF00231 ATP synthase VV_RS15785 PF02874 ATP synthase alpha/beta family, beta-barrel domain VV_RS15785 PF00306 ATP synthase alpha/beta chain, C terminal domain VV_RS15785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VV_RS15790 PF00213 ATP synthase delta (OSCP) subunit VV_RS15795 PF00430 ATP synthase B/B' CF(0) VV_RS15800 PF00137 ATP synthase subunit C VV_RS15805 PF00119 ATP synthase A chain VV_RS15810 PF03899 ATP synthase I chain VV_RS15815 PF02195 ParB-like nuclease domain VV_RS15815 PF17762 HTH domain found in ParB protein VV_RS15820 PF13614 AAA domain VV_RS15825 PF02527 rRNA small subunit methyltransferase G VV_RS15830 PF01134 Glucose inhibited division protein A VV_RS15830 PF13932 GidA associated domain VV_RS15850 PF02096 60Kd inner membrane protein VV_RS15850 PF14849 YidC periplasmic domain VV_RS15900 PF01751 Toprim domain VV_RS15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS15900 PF18053 DNA gyrase B subunit insert domain VV_RS15900 PF00204 DNA gyrase B VV_RS15900 PF00986 DNA gyrase B subunit, carboxyl terminus VV_RS15960 PF02803 Thiolase, C-terminal domain VV_RS15960 PF00108 Thiolase, N-terminal domain VV_RS16030 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VV_RS16030 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VV_RS16040 PF00873 AcrB/AcrD/AcrF family VV_RS16150 PF07992 Pyridine nucleotide-disulphide oxidoreductase VV_RS16150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VV_RS16370 PF05958 tRNA (Uracil-5-)-methyltransferase VV_RS16445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS16445 PF09308 LuxQ, periplasmic VV_RS16445 PF00512 His Kinase A (phospho-acceptor) domain VV_RS16445 PF00072 Response regulator receiver domain VV_RS16600 PF01926 50S ribosome-binding GTPase VV_RS16695 PF01293 Phosphoenolpyruvate carboxykinase VV_RS17000 PF04127 DNA / pantothenate metabolism flavoprotein VV_RS17000 PF02441 Flavoprotein VV_RS17120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VV_RS17200 PF00534 Glycosyl transferases group 1 VV_RS17200 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VV_RS17225 PF06082 Exopolysaccharide biosynthesis protein YbjH VV_RS17290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VV_RS17290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VV_RS17290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VV_RS17685 PF00398 Ribosomal RNA adenine dimethylase VV_RS17785 PF00990 Diguanylate cyclase, GGDEF domain VV_RS17785 PF08448 PAS fold VV_RS17910 PF04002 RadC-like JAB domain VV_RS18130 PF16537 Type II secretion system protein B VV_RS18210 PF00521 DNA gyrase/topoisomerase IV, subunit A VV_RS18210 PF03989 DNA gyrase C-terminal domain, beta-propeller VV_RS18335 PF02491 SHS2 domain inserted in FTSA VV_RS18370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VV_RS18370 PF02142 MGS-like domain VV_RS18370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VV_RS18435 PF01645 Conserved region in glutamate synthase VV_RS18435 PF01493 GXGXG motif VV_RS18435 PF00310 Glutamine amidotransferases class-II VV_RS18435 PF04898 Glutamate synthase central domain VV_RS18495 PF18415 Histidine kinase receptor ArcB trans-membrane domain VV_RS18495 PF00989 PAS fold VV_RS18495 PF01627 Hpt domain VV_RS18495 PF00512 His Kinase A (phospho-acceptor) domain VV_RS18495 PF00072 Response regulator receiver domain VV_RS18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS18525 PF00696 Amino acid kinase family VV_RS18525 PF03447 Homoserine dehydrogenase, NAD binding domain VV_RS18525 PF00742 Homoserine dehydrogenase VV_RS18525 PF13840 ACT domain VV_RS18525 PF01842 ACT domain VV_RS18690 PF03023 Lipid II flippase MurJ VV_RS18705 PF06827 Zinc finger found in FPG and IleRS VV_RS18705 PF08264 Anticodon-binding domain of tRNA VV_RS18705 PF00133 tRNA synthetases class I (I, L, M and V) VV_RS18770 PF03702 Anhydro-N-acetylmuramic acid kinase VV_RS19025 PF03129 Anticodon binding domain VV_RS19025 PF13393 Histidyl-tRNA synthetase VV_RS19500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VV_RS19500 PF14489 QueF-like protein VV_RS19555 PF00367 phosphotransferase system, EIIB VV_RS19555 PF02378 Phosphotransferase system, EIIC VV_RS19640 PF08264 Anticodon-binding domain of tRNA VV_RS19640 PF13603 Leucyl-tRNA synthetase, Domain 2 VV_RS19640 PF00133 tRNA synthetases class I (I, L, M and V) VV_RS19730 PF00403 Heavy-metal-associated domain VV_RS19820 PF02119 Flagellar P-ring protein VV_RS19830 PF10135 Rod binding protein VV_RS19830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VV_RS19895 PF00700 Bacterial flagellin C-terminal helical region VV_RS19895 PF07196 Flagellin hook IN motif VV_RS19895 PF00669 Bacterial flagellin N-terminal helical region VV_RS19910 PF00391 PEP-utilising enzyme, mobile domain VV_RS19910 PF05524 PEP-utilising enzyme, N-terminal VV_RS19910 PF02896 PEP-utilising enzyme, TIM barrel domain VV_RS20025 PF00854 POT family VV_RS20080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VV_RS20080 PF00749 tRNA synthetases class I (E and Q), catalytic domain VV_RS20410 PF00512 His Kinase A (phospho-acceptor) domain VV_RS20410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VV_RS20410 PF02743 Cache domain VV_RS20450 PF00004 ATPase family associated with various cellular activities (AAA) VV_RS20450 PF05362 Lon protease (S16) C-terminal proteolytic domain VV_RS20450 PF02190 ATP-dependent protease La (LON) substrate-binding domain VV_RS20555 PF00873 AcrB/AcrD/AcrF family VV_RS20580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV_RS20580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VV_RS20670 PF04245 37-kD nucleoid-associated bacterial protein VV_RS20725 PF00465 Iron-containing alcohol dehydrogenase VV_RS20725 PF00171 Aldehyde dehydrogenase family VV_RS21325 PF18073 Rubredoxin metal binding domain VV_RS21465 PF06968 Biotin and Thiamin Synthesis associated domain VV_RS21465 PF04055 Radical SAM superfamily VV_RS21845 PF07690 Major Facilitator Superfamily VV_RS21885 PF06965 Na+/H+ antiporter 1 VV_RS22315 PF00330 Aconitase family (aconitate hydratase) VV_RS22315 PF00694 Aconitase C-terminal domain VV_RS22480 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS22700 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VV_RS22700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VV_RS22840 PF00793 DAHP synthetase I family VV_RS23100 PF00528 Binding-protein-dependent transport system inner membrane component VV_RS23115 PF13416 Bacterial extracellular solute-binding protein VV_RS23555 PF00156 Phosphoribosyl transferase domain VV_RS23560 PF01757 Acyltransferase family VV_RS23575 PF01471 Putative peptidoglycan binding domain VV_RS23575 PF08291 Peptidase M15 VV_RS23590 PF10137 Predicted nucleotide-binding protein containing TIR-like domain VV_RS23600 PF12833 Helix-turn-helix domain