VV_RS00075 SM00433 TopoisomeraseII VV_RS00305 SM00382 ATPases associated with a variety of cellular activities VV_RS00315 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS00320 SM00382 ATPases associated with a variety of cellular activities VV_RS00320 SM00760 Bacterial dnaA protein helix-turn-helix domain VV_RS00325 SM00480 DNA polymerase III beta subunit VV_RS00335 SM00387 Histidine kinase-like ATPases VV_RS00335 SM00433 TopoisomeraseII VV_RS00345 SM00052 Putative diguanylate phosphodiesterase VV_RS00345 SM00267 diguanylate cyclase VV_RS00345 SM01079 VV_RS00345 VV_RS00395 SM00829 Enoylreductase VV_RS00520 SM00382 ATPases associated with a variety of cellular activities VV_RS00570 SM00220 Serine/Threonine protein kinases, catalytic domain VV_RS00580 SM00448 cheY-homologous receiver domain VV_RS00585 SM00354 helix_turn _helix lactose operon repressor VV_RS00640 SM00344 helix_turn_helix ASNC type VV_RS00645 SM00052 Putative diguanylate phosphodiesterase VV_RS00645 SM00091 PAS domain VV_RS00645 SM00267 diguanylate cyclase VV_RS00685 SM00028 Tetratricopeptide repeats VV_RS00710 SM01219 VV_RS00710 VV_RS00745 SM00052 Putative diguanylate phosphodiesterase VV_RS00745 SM00267 diguanylate cyclase VV_RS00745 SM00897 FIST N domain VV_RS00745 SM01204 VV_RS00745 VV_RS00750 SM01144 VV_RS00750 VV_RS00780 SM00052 Putative diguanylate phosphodiesterase VV_RS00785 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV_RS00790 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV_RS00795 SM00404 Protein tyrosine phosphatase, catalytic domain motif VV_RS00845 SM00382 ATPases associated with a variety of cellular activities VV_RS00845 SM00962 SRP54-type protein, GTPase domain VV_RS00845 SM00963 SRP54-type protein, helical bundle domain VV_RS00850 SM00382 ATPases associated with a variety of cellular activities VV_RS00865 SM00450 Rhodanese Homology Domain VV_RS00890 SM00563 Phosphate acyltransferases VV_RS00950 SM00422 helix_turn_helix, mercury resistance VV_RS00990 SM00387 Histidine kinase-like ATPases VV_RS00990 SM00388 His Kinase A (phosphoacceptor) domain VV_RS00990 SM00448 cheY-homologous receiver domain VV_RS00995 SM00530 Helix-turn-helix XRE-family like proteins VV_RS01050 SM00849 Metallo-beta-lactamase superfamily VV_RS01080 SM00635 Bacterial Ig-like domain 2 VV_RS01100 SM00974 VV_RS01100 VV_RS01130 SM00360 RNA recognition motif VV_RS01235 SM01004 Delta-aminolevulinic acid dehydratase VV_RS01240 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VV_RS01240 SM00474 3'-5' exonuclease VV_RS01240 SM00475 5'-3' exonuclease VV_RS01240 SM00482 DNA polymerase A domain VV_RS01270 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS01275 SM00052 Putative diguanylate phosphodiesterase VV_RS01275 SM00267 diguanylate cyclase VV_RS01275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS01280 SM00382 ATPases associated with a variety of cellular activities VV_RS01280 SM00448 cheY-homologous receiver domain VV_RS01285 SM00091 PAS domain VV_RS01285 SM00387 Histidine kinase-like ATPases VV_RS01285 SM00388 His Kinase A (phosphoacceptor) domain VV_RS01295 SM01230 VV_RS01295 VV_RS01345 SM00363 S4 RNA-binding domain VV_RS01360 SM00382 ATPases associated with a variety of cellular activities VV_RS01440 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS01440 SM00732 Likely ribonuclease with RNase H fold. VV_RS01450 SM00448 cheY-homologous receiver domain VV_RS01450 SM00862 Transcriptional regulatory protein, C terminal VV_RS01455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS01455 SM00387 Histidine kinase-like ATPases VV_RS01455 SM00388 His Kinase A (phosphoacceptor) domain VV_RS01465 SM00487 DEAD-like helicases superfamily VV_RS01465 SM00490 helicase superfamily c-terminal domain VV_RS01475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS01475 SM00954 Region found in RelA / SpoT proteins VV_RS01480 SM01409 VV_RS01480 VV_RS01485 SM00072 Guanylate kinase homologues. VV_RS01490 SM00028 Tetratricopeptide repeats VV_RS01540 SM00382 ATPases associated with a variety of cellular activities VV_RS01545 SM00382 ATPases associated with a variety of cellular activities VV_RS01585 SM00487 DEAD-like helicases superfamily VV_RS01605 SM00487 DEAD-like helicases superfamily VV_RS01605 SM00490 helicase superfamily c-terminal domain VV_RS01615 SM00530 Helix-turn-helix XRE-family like proteins VV_RS01665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS01665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS01665 SM01049 VV_RS01665 VV_RS01690 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VV_RS01690 SM01232 VV_RS01690 VV_RS01805 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS01930 SM00226 Low molecular weight phosphatase family VV_RS01945 SM00984 UDP binding domain VV_RS02025 SM00829 Enoylreductase VV_RS02060 SM00984 UDP binding domain VV_RS02075 SM00382 ATPases associated with a variety of cellular activities VV_RS02085 SM00849 Metallo-beta-lactamase superfamily VV_RS02085 SM01027 Beta-Casp domain VV_RS02095 SM01403 VV_RS02095 VV_RS02115 SM01382 VV_RS02115 VV_RS02115 SM01383 VV_RS02115 VV_RS02130 SM00322 K homology RNA-binding domain VV_RS02150 SM01374 VV_RS02150 VV_RS02155 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VV_RS02220 SM00363 S4 RNA-binding domain VV_RS02220 SM01390 VV_RS02220 VV_RS02225 SM00662 RNA polymerases D VV_RS02310 SM00382 ATPases associated with a variety of cellular activities VV_RS02390 SM00382 ATPases associated with a variety of cellular activities VV_RS02405 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS02405 SM00924 MgtE intracellular N domain VV_RS02435 SM00382 ATPases associated with a variety of cellular activities VV_RS02455 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS02465 SM00382 ATPases associated with a variety of cellular activities VV_RS02500 SM00563 Phosphate acyltransferases VV_RS02575 SM00650 Ribosomal RNA adenine dimethylases VV_RS02595 SM00271 DnaJ molecular chaperone homology domain VV_RS02615 SM01329 VV_RS02615 VV_RS02620 SM00917 LeuA allosteric (dimerisation) domain VV_RS02630 SM00014 Acid phosphatase homologues VV_RS02660 SM00091 PAS domain VV_RS02660 SM00267 diguanylate cyclase VV_RS02670 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV_RS02670 SM00895 VV_RS02670 VV_RS02680 SM00420 helix_turn_helix, Deoxyribose operon repressor VV_RS02680 SM01134 VV_RS02680 VV_RS02710 SM00563 Phosphate acyltransferases VV_RS02790 SM00420 helix_turn_helix, Deoxyribose operon repressor VV_RS02790 SM01134 VV_RS02790 VV_RS02795 SM01133 VV_RS02795 VV_RS02840 SM00420 helix_turn_helix, Deoxyribose operon repressor VV_RS02840 SM01134 VV_RS02840 VV_RS02905 SM00346 helix_turn_helix isocitrate lyase regulation VV_RS02960 SM00400 zinc finger VV_RS02960 SM00493 VV_RS02960 VV_RS02960 SM00766 DNA primase DnaG DnaB-binding VV_RS02985 SM01207 VV_RS02985 VV_RS02990 SM00905 Dihydroneopterin aldolase VV_RS03010 SM00382 ATPases associated with a variety of cellular activities VV_RS03015 SM00287 Bacterial SH3 domain homologues VV_RS03030 SM00880 VV_RS03030 VV_RS03030 SM01118 VV_RS03030 VV_RS03040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS03080 SM00387 Histidine kinase-like ATPases VV_RS03080 SM00433 TopoisomeraseII VV_RS03085 SM00434 DNA Topoisomerase IV VV_RS03090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV_RS03095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV_RS03145 SM00749 bacterial OsmY and nodulation domain VV_RS03225 SM00842 Cell division protein FtsA VV_RS03230 SM00864 Tubulin/FtsZ family, GTPase domain VV_RS03230 SM00865 Tubulin/FtsZ family, C-terminal domain VV_RS03245 SM00957 SecA DEAD-like domain VV_RS03245 SM00958 SecA preprotein cross-linking domain VV_RS03260 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VV_RS03265 SM00851 MGS-like domain VV_RS03265 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VV_RS03335 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS03340 SM00091 PAS domain VV_RS03340 SM00267 diguanylate cyclase VV_RS03345 SM00073 Histidine Phosphotransfer domain VV_RS03345 SM00091 PAS domain VV_RS03345 SM00387 Histidine kinase-like ATPases VV_RS03345 SM00388 His Kinase A (phosphoacceptor) domain VV_RS03345 SM00448 cheY-homologous receiver domain VV_RS03355 SM00448 cheY-homologous receiver domain VV_RS03355 SM00862 Transcriptional regulatory protein, C terminal VV_RS03395 SM00518 AP endonuclease family 2 VV_RS03400 SM00986 Uracil DNA glycosylase superfamily VV_RS03400 SM00987 UreE urease accessory protein, C-terminal domain VV_RS03425 SM00487 DEAD-like helicases superfamily VV_RS03425 SM00490 helicase superfamily c-terminal domain VV_RS03460 SM00937 VV_RS03460 VV_RS03470 SM00382 ATPases associated with a variety of cellular activities VV_RS03490 SM00927 DNA mismatch repair enzyme MutH VV_RS03500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV_RS03520 SM01154 VV_RS03520 VV_RS03535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV_RS03550 SM00904 Riboflavin kinase VV_RS03575 SM00448 cheY-homologous receiver domain VV_RS03575 SM00850 LytTr DNA-binding domain VV_RS03620 SM00830 Chorismate mutase type II VV_RS03635 SM00382 ATPases associated with a variety of cellular activities VV_RS03655 SM00830 Chorismate mutase type II VV_RS03675 SM00363 S4 RNA-binding domain VV_RS03685 SM00382 ATPases associated with a variety of cellular activities VV_RS03685 SM01086 C-terminal, D2-small domain, of ClpB protein VV_RS03750 SM00448 cheY-homologous receiver domain VV_RS03750 SM00862 Transcriptional regulatory protein, C terminal VV_RS03755 SM00091 PAS domain VV_RS03755 SM00387 Histidine kinase-like ATPases VV_RS03755 SM00388 His Kinase A (phosphoacceptor) domain VV_RS03785 SM00382 ATPases associated with a variety of cellular activities VV_RS03845 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS03850 SM00020 Trypsin-like serine protease VV_RS03865 SM01323 VV_RS03865 VV_RS03915 SM00271 DnaJ molecular chaperone homology domain VV_RS03940 SM00562 VV_RS03940 VV_RS03970 SM00564 beta-propeller repeat VV_RS03975 SM00173 Ras subfamily of RAS small GTPases VV_RS03975 SM00382 ATPases associated with a variety of cellular activities VV_RS03985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV_RS03985 SM00267 diguanylate cyclase VV_RS04000 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS04000 SM01240 VV_RS04000 VV_RS04010 SM00495 Chitin-binding domain type 3 VV_RS04080 SM00563 Phosphate acyltransferases VV_RS04160 SM00487 DEAD-like helicases superfamily VV_RS04250 SM00271 DnaJ molecular chaperone homology domain VV_RS04290 SM00829 Enoylreductase VV_RS04305 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS04310 SM01211 VV_RS04310 VV_RS04360 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VV_RS04410 SM00861 Transketolase, pyrimidine binding domain VV_RS04435 SM00981 VV_RS04435 VV_RS04460 SM00477 DNA/RNA non-specific endonuclease VV_RS04460 SM00892 DNA/RNA non-specific endonuclease VV_RS04465 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VV_RS04465 SM00475 5'-3' exonuclease VV_RS04475 SM00267 diguanylate cyclase VV_RS04480 SM00028 Tetratricopeptide repeats VV_RS04510 SM00382 ATPases associated with a variety of cellular activities VV_RS04510 SM00930 VV_RS04510 VV_RS04520 SM00354 helix_turn _helix lactose operon repressor VV_RS04530 SM00642 Alpha-amylase domain VV_RS04550 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS04565 SM00936 Penicillin-binding protein 5, C-terminal domain VV_RS04620 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS04620 SM01091 Transporter associated domain VV_RS04635 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS04730 SM01400 VV_RS04730 VV_RS04750 SM00937 VV_RS04750 VV_RS04785 SM00363 S4 RNA-binding domain VV_RS04790 SM00463 Small MutS-related domain VV_RS04810 SM01081 Putative carbohydrate binding domain VV_RS04875 SM00858 VV_RS04875 VV_RS04880 SM00260 Two component signalling adaptor domain VV_RS04880 SM00448 cheY-homologous receiver domain VV_RS04885 SM00138 Methyltransferase, chemotaxis proteins VV_RS04930 SM00047 Lysozyme subfamily 2 VV_RS04990 SM00771 ZipA, C-terminal domain (FtsZ-binding) VV_RS04995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV_RS04995 SM00292 breast cancer carboxy-terminal domain VV_RS04995 SM00532 Ligase N family VV_RS05015 SM00244 prohibitin homologues VV_RS05045 SM00938 Nitrogen regulatory protein P-II VV_RS05050 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS05075 SM00862 Transcriptional regulatory protein, C terminal VV_RS05080 SM00387 Histidine kinase-like ATPases VV_RS05095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS05095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS05095 SM01358 VV_RS05095 VV_RS05105 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VV_RS05230 SM00861 Transketolase, pyrimidine binding domain VV_RS05245 SM00881 CoA binding domain VV_RS05255 SM00382 ATPases associated with a variety of cellular activities VV_RS05265 SM00342 helix_turn_helix, arabinose operon control protein VV_RS05270 SM00899 VV_RS05270 VV_RS05290 SM00836 DALR anticodon binding domain VV_RS05290 SM01016 Arginyl tRNA synthetase N terminal dom VV_RS05310 SM00487 DEAD-like helicases superfamily VV_RS05310 SM00491 VV_RS05310 VV_RS05340 SM00474 3'-5' exonuclease VV_RS05385 SM00448 cheY-homologous receiver domain VV_RS05385 SM00862 Transcriptional regulatory protein, C terminal VV_RS05390 SM00388 His Kinase A (phosphoacceptor) domain VV_RS05400 SM00825 Beta-ketoacyl synthase VV_RS05415 SM00825 Beta-ketoacyl synthase VV_RS05475 SM00563 Phosphate acyltransferases VV_RS05510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS05510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS05520 SM00448 cheY-homologous receiver domain VV_RS05520 SM00862 Transcriptional regulatory protein, C terminal VV_RS05525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS05525 SM00387 Histidine kinase-like ATPases VV_RS05545 SM00382 ATPases associated with a variety of cellular activities VV_RS05570 SM00382 ATPases associated with a variety of cellular activities VV_RS05570 SM00448 cheY-homologous receiver domain VV_RS05575 SM00387 Histidine kinase-like ATPases VV_RS05575 SM00388 His Kinase A (phosphoacceptor) domain VV_RS05590 SM00382 ATPases associated with a variety of cellular activities VV_RS05590 SM00994 ClpX C4-type zinc finger VV_RS05590 SM01086 C-terminal, D2-small domain, of ClpB protein VV_RS05595 SM00382 ATPases associated with a variety of cellular activities VV_RS05595 SM00464 Found in ATP-dependent protease La (LON) VV_RS05600 SM00411 bacterial (prokaryotic) histone like domain VV_RS05620 SM01144 VV_RS05620 VV_RS05625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS05630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS05660 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VV_RS05680 SM00563 Phosphate acyltransferases VV_RS05690 SM00978 VV_RS05690 VV_RS05725 SM00344 helix_turn_helix ASNC type VV_RS05755 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS05755 SM00267 diguanylate cyclase VV_RS05775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS05785 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV_RS05805 SM00870 VV_RS05805 VV_RS05825 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VV_RS05825 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VV_RS05825 SM00493 VV_RS05825 VV_RS05835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VV_RS05835 SM00387 Histidine kinase-like ATPases VV_RS05835 SM00388 His Kinase A (phosphoacceptor) domain VV_RS05835 SM00448 cheY-homologous receiver domain VV_RS05840 SM00267 diguanylate cyclase VV_RS05840 SM00448 cheY-homologous receiver domain VV_RS05845 SM00155 Phospholipase D. Active site motifs. VV_RS05900 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV_RS05955 SM00479 VV_RS05955 VV_RS05975 SM00478 endonuclease III VV_RS05975 SM00525 VV_RS05975 VV_RS05985 SM00900 VV_RS05985 VV_RS06020 SM00487 DEAD-like helicases superfamily VV_RS06020 SM00490 helicase superfamily c-terminal domain VV_RS06025 SM00382 ATPases associated with a variety of cellular activities VV_RS06025 SM00448 cheY-homologous receiver domain VV_RS06040 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS06045 SM00852 Probable molybdopterin binding domain VV_RS06080 SM00382 ATPases associated with a variety of cellular activities VV_RS06085 SM00382 ATPases associated with a variety of cellular activities VV_RS06160 SM00481 DNA polymerase alpha chain like domain VV_RS06175 SM00363 S4 RNA-binding domain VV_RS06185 SM00841 Elongation factor P, C-terminal VV_RS06185 SM01185 VV_RS06185 VV_RS06195 SM00052 Putative diguanylate phosphodiesterase VV_RS06200 SM00486 DNA polymerase type-B family VV_RS06205 SM00421 helix_turn_helix, Lux Regulon VV_RS06205 SM00448 cheY-homologous receiver domain VV_RS06210 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV_RS06210 SM00465 GIY-YIG type nucleases (URI domain) VV_RS06265 SM00852 Probable molybdopterin binding domain VV_RS06295 SM00434 DNA Topoisomerase IV VV_RS06380 SM00226 Low molecular weight phosphatase family VV_RS06390 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS06395 SM00363 S4 RNA-binding domain VV_RS06425 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VV_RS06430 SM00822 VV_RS06430 VV_RS06440 SM00825 Beta-ketoacyl synthase VV_RS06505 SM00260 Two component signalling adaptor domain VV_RS06505 SM00448 cheY-homologous receiver domain VV_RS06510 SM00481 DNA polymerase alpha chain like domain VV_RS06525 SM00822 VV_RS06525 VV_RS06540 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS06545 SM00411 bacterial (prokaryotic) histone like domain VV_RS06555 SM00028 Tetratricopeptide repeats VV_RS06560 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VV_RS06580 SM00382 ATPases associated with a variety of cellular activities VV_RS06585 SM00382 ATPases associated with a variety of cellular activities VV_RS06630 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VV_RS06630 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VV_RS06635 SM00344 helix_turn_helix ASNC type VV_RS06640 SM00843 VV_RS06640 VV_RS06650 SM00382 ATPases associated with a variety of cellular activities VV_RS06665 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS06665 SM00876 Biotin and Thiamin Synthesis associated domain VV_RS06755 SM00528 Domain in histone-like proteins of HNS family VV_RS06810 SM00052 Putative diguanylate phosphodiesterase VV_RS06825 SM00840 VV_RS06825 VV_RS06915 SM01131 VV_RS06915 VV_RS06930 SM00382 ATPases associated with a variety of cellular activities VV_RS06935 SM00382 ATPases associated with a variety of cellular activities VV_RS06955 SM00382 ATPases associated with a variety of cellular activities VV_RS07000 SM00155 Phospholipase D. Active site motifs. VV_RS07010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS07010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS07035 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV_RS07035 SM00382 ATPases associated with a variety of cellular activities VV_RS07045 SM00382 ATPases associated with a variety of cellular activities VV_RS07075 SM00267 diguanylate cyclase VV_RS07095 SM00387 Histidine kinase-like ATPases VV_RS07100 SM00448 cheY-homologous receiver domain VV_RS07100 SM00862 Transcriptional regulatory protein, C terminal VV_RS07110 SM00487 DEAD-like helicases superfamily VV_RS07110 SM00490 helicase superfamily c-terminal domain VV_RS07115 SM00363 S4 RNA-binding domain VV_RS07140 SM00382 ATPases associated with a variety of cellular activities VV_RS07225 SM00448 cheY-homologous receiver domain VV_RS07230 SM00387 Histidine kinase-like ATPases VV_RS07245 SM00382 ATPases associated with a variety of cellular activities VV_RS07250 SM00382 ATPases associated with a variety of cellular activities VV_RS07275 SM00267 diguanylate cyclase VV_RS07290 SM00919 Malic enzyme, NAD binding domain VV_RS07290 SM01274 VV_RS07290 VV_RS07295 SM00487 DEAD-like helicases superfamily VV_RS07295 SM00490 helicase superfamily c-terminal domain VV_RS07295 SM00847 Helicase associated domain (HA2) Add an annotation VV_RS07355 SM00855 Phosphoglycerate mutase family VV_RS07375 SM00382 ATPases associated with a variety of cellular activities VV_RS07420 SM00028 Tetratricopeptide repeats VV_RS07455 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS07485 SM00267 diguanylate cyclase VV_RS07490 SM00357 Cold shock protein domain VV_RS07510 SM00420 helix_turn_helix, Deoxyribose operon repressor VV_RS07510 SM01134 VV_RS07510 VV_RS07515 SM00382 ATPases associated with a variety of cellular activities VV_RS07535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS07540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS07540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS07550 SM00020 Trypsin-like serine protease VV_RS07555 SM00421 helix_turn_helix, Lux Regulon VV_RS07595 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS07595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS07595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS07600 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV_RS07600 SM00895 VV_RS07600 VV_RS07635 SM00020 Trypsin-like serine protease VV_RS07635 SM00495 Chitin-binding domain type 3 VV_RS07645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS07645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS07665 SM00028 Tetratricopeptide repeats VV_RS07665 SM00267 diguanylate cyclase VV_RS07690 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VV_RS07695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS07720 SM00382 ATPases associated with a variety of cellular activities VV_RS07735 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS07755 SM00563 Phosphate acyltransferases VV_RS07760 SM00342 helix_turn_helix, arabinose operon control protein VV_RS07810 SM00903 Flavin reductase like domain VV_RS07820 SM00347 helix_turn_helix multiple antibiotic resistance protein VV_RS07885 SM00342 helix_turn_helix, arabinose operon control protein VV_RS07925 SM00421 helix_turn_helix, Lux Regulon VV_RS07955 SM00091 PAS domain VV_RS07955 SM00387 Histidine kinase-like ATPases VV_RS07960 SM00448 cheY-homologous receiver domain VV_RS07975 SM01350 VV_RS07975 VV_RS08060 SM00382 ATPases associated with a variety of cellular activities VV_RS08060 SM00448 cheY-homologous receiver domain VV_RS08065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS08065 SM00387 Histidine kinase-like ATPases VV_RS08065 SM00388 His Kinase A (phosphoacceptor) domain VV_RS08065 SM00448 cheY-homologous receiver domain VV_RS08100 SM00028 Tetratricopeptide repeats VV_RS08100 SM00267 diguanylate cyclase VV_RS08145 SM00382 ATPases associated with a variety of cellular activities VV_RS08155 SM00945 ProQ/FINO family VV_RS08160 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV_RS08160 SM00245 tail specific protease VV_RS08190 SM00981 VV_RS08190 VV_RS08200 SM00382 ATPases associated with a variety of cellular activities VV_RS08245 SM00387 Histidine kinase-like ATPases VV_RS08245 SM00388 His Kinase A (phosphoacceptor) domain VV_RS08245 SM00448 cheY-homologous receiver domain VV_RS08250 SM00897 FIST N domain VV_RS08250 SM01204 VV_RS08250 VV_RS08300 SM00100 Cyclic nucleotide-monophosphate binding domain VV_RS08300 SM00419 helix_turn_helix, cAMP Regulatory protein VV_RS08330 SM00382 ATPases associated with a variety of cellular activities VV_RS08395 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VV_RS08430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS08430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS08435 SM00382 ATPases associated with a variety of cellular activities VV_RS08450 SM00387 Histidine kinase-like ATPases VV_RS08450 SM00388 His Kinase A (phosphoacceptor) domain VV_RS08455 SM00382 ATPases associated with a variety of cellular activities VV_RS08455 SM00448 cheY-homologous receiver domain VV_RS08470 SM00382 ATPases associated with a variety of cellular activities VV_RS08480 SM00852 Probable molybdopterin binding domain VV_RS08495 SM01144 VV_RS08495 VV_RS08505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS08520 SM00267 diguanylate cyclase VV_RS08525 SM00448 cheY-homologous receiver domain VV_RS08630 SM00990 VV_RS08630 VV_RS08675 SM00226 Low molecular weight phosphatase family VV_RS09260 SM00255 Toll - interleukin 1 - resistance VV_RS09345 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VV_RS09360 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV_RS09360 SM00866 VV_RS09360 VV_RS09390 SM00020 Trypsin-like serine protease VV_RS09420 SM00671 Sel1-like repeats. VV_RS09445 SM00954 Region found in RelA / SpoT proteins VV_RS09450 SM00411 bacterial (prokaryotic) histone like domain VV_RS09470 SM00873 B3/4 domain VV_RS09470 SM00874 tRNA synthetase B5 domain VV_RS09470 SM00896 Ferredoxin-fold anticodon binding domain VV_RS09480 SM00267 diguanylate cyclase VV_RS09525 SM00530 Helix-turn-helix XRE-family like proteins VV_RS09595 SM00382 ATPases associated with a variety of cellular activities VV_RS09595 SM00487 DEAD-like helicases superfamily VV_RS09595 SM00490 helicase superfamily c-terminal domain VV_RS09595 SM00847 Helicase associated domain (HA2) Add an annotation VV_RS09600 SM00636 VV_RS09600 VV_RS09625 SM00028 Tetratricopeptide repeats VV_RS09660 SM00858 VV_RS09660 VV_RS09705 SM00479 VV_RS09705 VV_RS09710 SM00267 diguanylate cyclase VV_RS09710 SM01079 VV_RS09710 VV_RS09740 SM00267 diguanylate cyclase VV_RS09815 SM00382 ATPases associated with a variety of cellular activities VV_RS09820 SM00382 ATPases associated with a variety of cellular activities VV_RS09855 SM00046 Diacylglycerol kinase catalytic domain (presumed) VV_RS09870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS09875 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. VV_RS09900 SM00052 Putative diguanylate phosphodiesterase VV_RS09900 SM00267 diguanylate cyclase VV_RS09905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS09915 SM00052 Putative diguanylate phosphodiesterase VV_RS09915 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VV_RS09915 SM00267 diguanylate cyclase VV_RS09920 SM00267 diguanylate cyclase VV_RS09925 SM00448 cheY-homologous receiver domain VV_RS09930 SM00100 Cyclic nucleotide-monophosphate binding domain VV_RS09930 SM00387 Histidine kinase-like ATPases VV_RS09955 SM00091 PAS domain VV_RS09955 SM00382 ATPases associated with a variety of cellular activities VV_RS09985 SM00387 Histidine kinase-like ATPases VV_RS09985 SM00388 His Kinase A (phosphoacceptor) domain VV_RS09985 SM00448 cheY-homologous receiver domain VV_RS10010 SM00052 Putative diguanylate phosphodiesterase VV_RS10025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS10025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS10040 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV_RS10055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS10070 SM00100 Cyclic nucleotide-monophosphate binding domain VV_RS10070 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS10075 SM00479 VV_RS10075 VV_RS10080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS10080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS10090 SM00347 helix_turn_helix multiple antibiotic resistance protein VV_RS10095 SM00421 helix_turn_helix, Lux Regulon VV_RS10095 SM00448 cheY-homologous receiver domain VV_RS10100 SM00387 Histidine kinase-like ATPases VV_RS10100 SM01049 VV_RS10100 VV_RS10135 SM00849 Metallo-beta-lactamase superfamily VV_RS10175 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV_RS10200 SM00267 diguanylate cyclase VV_RS10205 SM00642 Alpha-amylase domain VV_RS10210 SM00382 ATPases associated with a variety of cellular activities VV_RS10260 SM00052 Putative diguanylate phosphodiesterase VV_RS10260 SM00091 PAS domain VV_RS10265 SM00052 Putative diguanylate phosphodiesterase VV_RS10265 SM00091 PAS domain VV_RS10270 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS10275 SM00052 Putative diguanylate phosphodiesterase VV_RS10275 SM00267 diguanylate cyclase VV_RS10275 SM01049 VV_RS10275 VV_RS10290 SM00342 helix_turn_helix, arabinose operon control protein VV_RS10400 SM01007 Class II Aldolase and Adducin N-terminal domain VV_RS10425 SM00420 helix_turn_helix, Deoxyribose operon repressor VV_RS10425 SM01134 VV_RS10425 VV_RS10430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS10505 SM00487 DEAD-like helicases superfamily VV_RS10505 SM00490 helicase superfamily c-terminal domain VV_RS10520 SM00382 ATPases associated with a variety of cellular activities VV_RS10525 SM00487 DEAD-like helicases superfamily VV_RS10555 SM00487 DEAD-like helicases superfamily VV_RS10595 SM00052 Putative diguanylate phosphodiesterase VV_RS10605 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VV_RS10620 SM00387 Histidine kinase-like ATPases VV_RS10620 SM00388 His Kinase A (phosphoacceptor) domain VV_RS10625 SM00421 helix_turn_helix, Lux Regulon VV_RS10625 SM00448 cheY-homologous receiver domain VV_RS10665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS10670 SM00267 diguanylate cyclase VV_RS10675 SM00052 Putative diguanylate phosphodiesterase VV_RS10715 SM00919 Malic enzyme, NAD binding domain VV_RS10715 SM01274 VV_RS10715 VV_RS10720 SM00998 Adenylosuccinate lyase C-terminus VV_RS10825 SM00387 Histidine kinase-like ATPases VV_RS10825 SM00388 His Kinase A (phosphoacceptor) domain VV_RS10825 SM00448 cheY-homologous receiver domain VV_RS10860 SM00028 Tetratricopeptide repeats VV_RS10915 SM00382 ATPases associated with a variety of cellular activities VV_RS10920 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV_RS10925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS10980 SM00342 helix_turn_helix, arabinose operon control protein VV_RS11010 SM00448 cheY-homologous receiver domain VV_RS11010 SM00862 Transcriptional regulatory protein, C terminal VV_RS11020 SM00354 helix_turn _helix lactose operon repressor VV_RS11055 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VV_RS11055 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VV_RS11055 SM00493 VV_RS11055 VV_RS11090 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS11095 SM00382 ATPases associated with a variety of cellular activities VV_RS11095 SM01086 C-terminal, D2-small domain, of ClpB protein VV_RS11105 SM00357 Cold shock protein domain VV_RS11130 SM00491 VV_RS11130 VV_RS11150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS11150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS11160 SM01276 VV_RS11160 VV_RS11175 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS11175 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VV_RS11180 SM00382 ATPases associated with a variety of cellular activities VV_RS11205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS11205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS11225 SM00763 PrkA AAA domain VV_RS11240 SM00267 diguanylate cyclase VV_RS11260 SM00382 ATPases associated with a variety of cellular activities VV_RS11265 SM00849 Metallo-beta-lactamase superfamily VV_RS11280 SM00382 ATPases associated with a variety of cellular activities VV_RS11295 SM00487 DEAD-like helicases superfamily VV_RS11295 SM00490 helicase superfamily c-terminal domain VV_RS11295 SM00982 VV_RS11295 VV_RS11295 SM01058 CarD-like/TRCF domain VV_RS11345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS11345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS11365 SM00116 Domain in cystathionine beta-synthase and other proteins. VV_RS11370 SM00267 diguanylate cyclase VV_RS11385 SM00862 Transcriptional regulatory protein, C terminal VV_RS11395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS11395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS11405 SM00267 diguanylate cyclase VV_RS11440 SM00098 Alkaline phosphatase homologues VV_RS11475 SM00448 cheY-homologous receiver domain VV_RS11475 SM00862 Transcriptional regulatory protein, C terminal VV_RS11480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS11480 SM00387 Histidine kinase-like ATPases VV_RS11480 SM00388 His Kinase A (phosphoacceptor) domain VV_RS11495 SM00493 VV_RS11495 VV_RS11505 SM00382 ATPases associated with a variety of cellular activities VV_RS11520 SM00448 cheY-homologous receiver domain VV_RS11565 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV_RS11575 SM00825 Beta-ketoacyl synthase VV_RS11610 SM00463 Small MutS-related domain VV_RS11615 SM00855 Phosphoglycerate mutase family VV_RS11700 SM00382 ATPases associated with a variety of cellular activities VV_RS11710 SM00260 Two component signalling adaptor domain VV_RS11715 SM00260 Two component signalling adaptor domain VV_RS11725 SM00448 cheY-homologous receiver domain VV_RS11730 SM00073 Histidine Phosphotransfer domain VV_RS11730 SM00260 Two component signalling adaptor domain VV_RS11730 SM00387 Histidine kinase-like ATPases VV_RS11730 SM01231 VV_RS11730 VV_RS11740 SM00448 cheY-homologous receiver domain VV_RS11755 SM00382 ATPases associated with a variety of cellular activities VV_RS11755 SM00962 SRP54-type protein, GTPase domain VV_RS11815 SM00382 ATPases associated with a variety of cellular activities VV_RS11840 SM00382 ATPases associated with a variety of cellular activities VV_RS11840 SM00448 cheY-homologous receiver domain VV_RS11845 SM00387 Histidine kinase-like ATPases VV_RS11845 SM00388 His Kinase A (phosphoacceptor) domain VV_RS11850 SM00382 ATPases associated with a variety of cellular activities VV_RS11945 SM01130 VV_RS11945 VV_RS11970 SM00028 Tetratricopeptide repeats VV_RS12070 SM00479 VV_RS12070 VV_RS12085 SM00849 Metallo-beta-lactamase superfamily VV_RS12090 SM00257 Lysin motif VV_RS12105 SM00938 Nitrogen regulatory protein P-II VV_RS12115 SM00977 TilS substrate C-terminal domain VV_RS12125 SM00481 DNA polymerase alpha chain like domain VV_RS12155 SM00935 Outer membrane protein (OmpH-like) VV_RS12165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV_RS12210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS12305 SM00495 Chitin-binding domain type 3 VV_RS12305 SM00636 VV_RS12305 VV_RS12315 SM00487 DEAD-like helicases superfamily VV_RS12315 SM00490 helicase superfamily c-terminal domain VV_RS12325 SM00267 diguanylate cyclase VV_RS12325 SM00448 cheY-homologous receiver domain VV_RS12355 SM00900 VV_RS12355 VV_RS12440 SM00925 MltA specific insert domain VV_RS12510 SM00420 helix_turn_helix, Deoxyribose operon repressor VV_RS12510 SM01134 VV_RS12510 VV_RS12550 SM00354 helix_turn _helix lactose operon repressor VV_RS12555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS12555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS12555 SM01049 VV_RS12555 VV_RS12580 SM00354 helix_turn _helix lactose operon repressor VV_RS12590 SM01038 Beta galactosidase small chain VV_RS12630 SM00028 Tetratricopeptide repeats VV_RS12680 SM00858 VV_RS12680 VV_RS12705 SM00342 helix_turn_helix, arabinose operon control protein VV_RS12715 SM00838 Elongation factor G C-terminus VV_RS12715 SM00889 Elongation factor G, domain IV VV_RS12730 SM00267 diguanylate cyclase VV_RS12735 SM00382 ATPases associated with a variety of cellular activities VV_RS12765 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VV_RS12770 SM01133 VV_RS12770 VV_RS12790 SM00267 diguanylate cyclase VV_RS12795 SM00052 Putative diguanylate phosphodiesterase VV_RS12795 SM00267 diguanylate cyclase VV_RS12820 SM00052 Putative diguanylate phosphodiesterase VV_RS12820 SM00091 PAS domain VV_RS12820 SM00267 diguanylate cyclase VV_RS12840 SM00347 helix_turn_helix multiple antibiotic resistance protein VV_RS12845 SM00028 Tetratricopeptide repeats VV_RS12850 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS12850 SM00322 K homology RNA-binding domain VV_RS12880 SM01387 VV_RS12880 VV_RS12900 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS12935 SM00382 ATPases associated with a variety of cellular activities VV_RS12945 SM01103 VV_RS12945 VV_RS13015 SM00091 PAS domain VV_RS13015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS13015 SM00387 Histidine kinase-like ATPases VV_RS13015 SM00388 His Kinase A (phosphoacceptor) domain VV_RS13015 SM00448 cheY-homologous receiver domain VV_RS13035 SM00382 ATPases associated with a variety of cellular activities VV_RS13040 SM00382 ATPases associated with a variety of cellular activities VV_RS13060 SM01068 Putative carbohydrate binding domain VV_RS13070 SM00382 ATPases associated with a variety of cellular activities VV_RS13090 SM00938 Nitrogen regulatory protein P-II VV_RS13130 SM00487 DEAD-like helicases superfamily VV_RS13130 SM00490 helicase superfamily c-terminal domain VV_RS13130 SM00847 Helicase associated domain (HA2) Add an annotation VV_RS13175 SM00382 ATPases associated with a variety of cellular activities VV_RS13185 SM00947 Carbonic anhydrase VV_RS13215 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV_RS13215 SM00895 VV_RS13215 VV_RS13220 SM00644 VV_RS13220 VV_RS13285 SM00382 ATPases associated with a variety of cellular activities VV_RS13285 SM00962 SRP54-type protein, GTPase domain VV_RS13285 SM00963 SRP54-type protein, helical bundle domain VV_RS13295 SM01091 Transporter associated domain VV_RS13325 SM00829 Enoylreductase VV_RS13395 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VV_RS13405 SM00382 ATPases associated with a variety of cellular activities VV_RS13415 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VV_RS13415 SM00534 ATPase domain of DNA mismatch repair MUTS family VV_RS13425 SM00257 Lysin motif VV_RS13460 SM01192 VV_RS13460 VV_RS13460 SM01193 VV_RS13460 VV_RS13475 SM00954 Region found in RelA / SpoT proteins VV_RS13485 SM00073 Histidine Phosphotransfer domain VV_RS13485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS13485 SM00387 Histidine kinase-like ATPases VV_RS13485 SM00388 His Kinase A (phosphoacceptor) domain VV_RS13485 SM00448 cheY-homologous receiver domain VV_RS13490 SM00267 diguanylate cyclase VV_RS13525 SM00358 Double-stranded RNA binding motif VV_RS13525 SM00535 Ribonuclease III family VV_RS13535 SM00838 Elongation factor G C-terminus VV_RS13655 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV_RS13665 SM00861 Transketolase, pyrimidine binding domain VV_RS13680 SM00731 SprT homologues. VV_RS13705 SM00732 Likely ribonuclease with RNase H fold. VV_RS13735 SM01152 VV_RS13735 VV_RS13750 SM00729 Elongator protein 3, MiaB family, Radical SAM VV_RS13755 SM00478 endonuclease III VV_RS13770 SM00478 endonuclease III VV_RS13770 SM00525 VV_RS13770 VV_RS13800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS13800 SM01049 VV_RS13800 VV_RS13840 SM00849 Metallo-beta-lactamase superfamily VV_RS13915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV_RS13925 SM00354 helix_turn _helix lactose operon repressor VV_RS13955 SM00495 Chitin-binding domain type 3 VV_RS14060 SM00487 DEAD-like helicases superfamily VV_RS14060 SM00490 helicase superfamily c-terminal domain VV_RS14065 SM00670 Large family of predicted nucleotide-binding domains VV_RS14085 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS14155 SM00382 ATPases associated with a variety of cellular activities VV_RS14160 SM00028 Tetratricopeptide repeats VV_RS14170 SM00965 Secretin and TonB N terminus short domain VV_RS14190 SM00052 Putative diguanylate phosphodiesterase VV_RS14190 SM00267 diguanylate cyclase VV_RS14200 SM00421 helix_turn_helix, Lux Regulon VV_RS14230 SM01018 B12 binding domain VV_RS14240 SM00091 PAS domain VV_RS14240 SM00267 diguanylate cyclase VV_RS14245 SM00897 FIST N domain VV_RS14245 SM01204 VV_RS14245 VV_RS14345 SM01005 Alanine racemase, C-terminal domain VV_RS14405 SM00965 Secretin and TonB N terminus short domain VV_RS14460 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV_RS14500 SM00919 Malic enzyme, NAD binding domain VV_RS14500 SM01274 VV_RS14500 VV_RS14510 SM00487 DEAD-like helicases superfamily VV_RS14510 SM00490 helicase superfamily c-terminal domain VV_RS14515 SM00354 helix_turn _helix lactose operon repressor VV_RS14530 SM00382 ATPases associated with a variety of cellular activities VV_RS14530 SM01086 C-terminal, D2-small domain, of ClpB protein VV_RS14605 SM00838 Elongation factor G C-terminus VV_RS14605 SM00889 Elongation factor G, domain IV VV_RS14645 SM00320 WD40 repeats VV_RS14680 SM00382 ATPases associated with a variety of cellular activities VV_RS14705 SM00100 Cyclic nucleotide-monophosphate binding domain VV_RS14705 SM00419 helix_turn_helix, cAMP Regulatory protein VV_RS14710 SM01150 VV_RS14710 VV_RS14755 SM00967 RNA 2'-O ribose methyltransferase substrate binding VV_RS14760 SM00316 Ribosomal protein S1-like RNA-binding domain VV_RS14760 SM00357 Cold shock protein domain VV_RS14760 SM00955 VV_RS14760 VV_RS14780 SM00671 Sel1-like repeats. VV_RS14785 SM00788 Adenylosuccinate synthetase VV_RS14795 SM00244 prohibitin homologues VV_RS14800 SM00244 prohibitin homologues VV_RS14820 SM00853 MutL C terminal dimerisation domain VV_RS14820 SM01340 VV_RS14820 VV_RS14825 SM00257 Lysin motif VV_RS14825 SM00646 VV_RS14825 VV_RS14895 SM00479 VV_RS14895 VV_RS14930 SM00450 Rhodanese Homology Domain VV_RS14945 SM00971 Serine acetyltransferase, N-terminal VV_RS15005 SM00841 Elongation factor P, C-terminal VV_RS15005 SM01185 VV_RS15005 VV_RS15030 SM00883 Chaperonin 10 Kd subunit VV_RS15055 SM00448 cheY-homologous receiver domain VV_RS15055 SM00862 Transcriptional regulatory protein, C terminal VV_RS15060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS15060 SM00387 Histidine kinase-like ATPases VV_RS15060 SM00388 His Kinase A (phosphoacceptor) domain VV_RS15095 SM00421 helix_turn_helix, Lux Regulon VV_RS15095 SM00448 cheY-homologous receiver domain VV_RS15130 SM00387 Histidine kinase-like ATPases VV_RS15130 SM00388 His Kinase A (phosphoacceptor) domain VV_RS15130 SM00448 cheY-homologous receiver domain VV_RS15140 SM00100 Cyclic nucleotide-monophosphate binding domain VV_RS15145 SM00479 VV_RS15145 VV_RS15165 SM00878 Biotin carboxylase C-terminal domain VV_RS15185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV_RS15185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV_RS15185 SM01049 VV_RS15185 VV_RS15190 SM00422 helix_turn_helix, mercury resistance VV_RS15195 SM00798 AICARFT/IMPCHase bienzyme VV_RS15195 SM00851 MGS-like domain VV_RS15200 SM01209 VV_RS15200 VV_RS15200 SM01210 VV_RS15200 VV_RS15210 SM00411 bacterial (prokaryotic) histone like domain VV_RS15230 SM00986 Uracil DNA glycosylase superfamily VV_RS15230 SM00987 UreE urease accessory protein, C-terminal domain VV_RS15260 SM00663 RNA polymerase I subunit A N-terminus VV_RS15285 SM00649 Ribosomal protein L11/L12 VV_RS15290 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VV_RS15290 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VV_RS15345 SM00155 Phospholipase D. Active site motifs. VV_RS15420 SM00357 Cold shock protein domain VV_RS15420 SM00382 ATPases associated with a variety of cellular activities VV_RS15420 SM00959 Rho termination factor, N-terminal domain VV_RS15430 SM00487 DEAD-like helicases superfamily VV_RS15430 SM00490 helicase superfamily c-terminal domain VV_RS15450 SM00341 Helicase and RNase D C-terminal VV_RS15450 SM00487 DEAD-like helicases superfamily VV_RS15450 SM00490 helicase superfamily c-terminal domain VV_RS15450 SM00956 VV_RS15450 VV_RS15460 SM00342 helix_turn_helix, arabinose operon control protein VV_RS15515 SM00876 Biotin and Thiamin Synthesis associated domain VV_RS15615 SM01001 AIR carboxylase VV_RS15645 SM00257 Lysin motif VV_RS15705 SM00563 Phosphate acyltransferases VV_RS15715 SM00382 ATPases associated with a variety of cellular activities VV_RS15755 SM00062 Bacterial periplasmic substrate-binding proteins VV_RS15775 SM00382 ATPases associated with a variety of cellular activities VV_RS15815 SM00470 ParB-like nuclease domain VV_RS15830 SM01228 VV_RS15830 VV_RS15900 SM00433 TopoisomeraseII VV_RS16445 SM00387 Histidine kinase-like ATPases VV_RS16445 SM00388 His Kinase A (phosphoacceptor) domain VV_RS17685 SM00650 Ribosomal RNA adenine dimethylases VV_RS17785 SM00091 PAS domain VV_RS17785 SM00267 diguanylate cyclase VV_RS18495 SM00387 Histidine kinase-like ATPases VV_RS18495 SM00388 His Kinase A (phosphoacceptor) domain VV_RS18495 SM00448 cheY-homologous receiver domain VV_RS20410 SM00388 His Kinase A (phosphoacceptor) domain VV_RS21325 SM00028 Tetratricopeptide repeats VV_RS22700 SM01350 VV_RS22700 VV_RS23585 SM00327 von Willebrand factor (vWF) type A domain VV_RS23600 SM00342 helix_turn_helix, arabinose operon control protein VV_RS23610 SM00342 helix_turn_helix, arabinose operon control protein