CF386_RS00010	SM00421	helix_turn_helix, Lux Regulon
CF386_RS00025	SM00354	helix_turn _helix lactose operon repressor
CF386_RS00030	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00035	SM00062	Bacterial periplasmic substrate-binding proteins
CF386_RS00035	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CF386_RS00055	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00085	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00285	SM00631	CF386_RS00285
CF386_RS00360	SM00465	GIY-YIG type nucleases (URI domain)
CF386_RS00365	SM00421	helix_turn_helix, Lux Regulon
CF386_RS00365	SM00448	cheY-homologous receiver domain
CF386_RS00370	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00390	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CF386_RS00450	SM00822	CF386_RS00450
CF386_RS00455	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CF386_RS00480	SM00363	S4 RNA-binding domain
CF386_RS00485	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS00540	SM00843	CF386_RS00540
CF386_RS00545	SM00344	helix_turn_helix ASNC type
CF386_RS00550	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00555	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00565	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS00570	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00570	SM01086	C-terminal, D2-small domain, of ClpB protein
CF386_RS00590	SM01329	CF386_RS00590
CF386_RS00620	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CF386_RS00625	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00630	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00655	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00655	SM00448	cheY-homologous receiver domain
CF386_RS00660	SM00487	DEAD-like helicases superfamily
CF386_RS00660	SM00490	helicase superfamily c-terminal domain
CF386_RS00685	SM00478	endonuclease III
CF386_RS00685	SM00525	CF386_RS00685
CF386_RS00695	SM00479	CF386_RS00695
CF386_RS00760	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CF386_RS00820	SM00411	bacterial (prokaryotic) histone like domain
CF386_RS00825	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00825	SM00464	Found in ATP-dependent protease La (LON)
CF386_RS00830	SM00382	ATPases associated with a variety of cellular activities
CF386_RS00830	SM00994	ClpX C4-type zinc finger
CF386_RS00830	SM01086	C-terminal, D2-small domain, of ClpB protein
CF386_RS00865	SM00448	cheY-homologous receiver domain
CF386_RS00905	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CF386_RS00935	SM00363	S4 RNA-binding domain
CF386_RS00990	SM00890	Domain of unknown function
CF386_RS01030	SM00937	CF386_RS01030
CF386_RS01135	SM00116	Domain in cystathionine beta-synthase and other proteins.
CF386_RS01135	SM01091	Transporter associated domain
CF386_RS01180	SM00936	Penicillin-binding protein 5, C-terminal domain 
CF386_RS01195	SM00729	Elongator protein 3, MiaB family, Radical SAM
CF386_RS01205	SM01130	CF386_RS01205
CF386_RS01255	SM00479	CF386_RS01255
CF386_RS01270	SM00849	Metallo-beta-lactamase superfamily
CF386_RS01320	SM00382	ATPases associated with a variety of cellular activities
CF386_RS01340	SM00977	TilS substrate C-terminal domain
CF386_RS01380	SM00935	Outer membrane protein (OmpH-like)
CF386_RS01390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CF386_RS01430	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CF386_RS01550	SM00382	ATPases associated with a variety of cellular activities
CF386_RS01550	SM01086	C-terminal, D2-small domain, of ClpB protein
CF386_RS01560	SM00363	S4 RNA-binding domain
CF386_RS01575	SM00830	Chorismate mutase type II
CF386_RS01610	SM00382	ATPases associated with a variety of cellular activities
CF386_RS01610	SM00962	SRP54-type protein, GTPase domain
CF386_RS01610	SM00963	SRP54-type protein, helical bundle domain
CF386_RS01620	SM01091	Transporter associated domain
CF386_RS01670	SM00382	ATPases associated with a variety of cellular activities
CF386_RS01680	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CF386_RS01680	SM00534	ATPase domain of DNA mismatch repair MUTS family
CF386_RS01720	SM01192	CF386_RS01720
CF386_RS01720	SM01193	CF386_RS01720
CF386_RS01730	SM00954	Region found in RelA / SpoT proteins
CF386_RS01735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CF386_RS01735	SM00387	Histidine kinase-like ATPases
CF386_RS01735	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS01735	SM00448	cheY-homologous receiver domain
CF386_RS01760	SM00358	Double-stranded RNA binding motif
CF386_RS01760	SM00535	Ribonuclease III family
CF386_RS01765	SM00838	Elongation factor G C-terminus
CF386_RS01875	SM00861	Transketolase, pyrimidine binding domain
CF386_RS01895	SM00732	Likely ribonuclease with RNase H fold.
CF386_RS01915	SM00729	Elongator protein 3, MiaB family, Radical SAM
CF386_RS01925	SM00478	endonuclease III
CF386_RS01995	SM00938	Nitrogen regulatory protein P-II
CF386_RS02020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CF386_RS02020	SM00895	CF386_RS02020
CF386_RS02070	SM00957	SecA DEAD-like domain
CF386_RS02070	SM00958	SecA preprotein cross-linking domain
CF386_RS02080	SM00864	Tubulin/FtsZ family, GTPase domain
CF386_RS02080	SM00865	Tubulin/FtsZ family, C-terminal domain
CF386_RS02085	SM00842	Cell division protein FtsA
CF386_RS02220	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CF386_RS02225	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CF386_RS02255	SM00382	ATPases associated with a variety of cellular activities
CF386_RS02275	SM00382	ATPases associated with a variety of cellular activities
CF386_RS02295	SM00936	Penicillin-binding protein 5, C-terminal domain 
CF386_RS02320	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS02340	SM00052	Putative diguanylate phosphodiesterase
CF386_RS02405	SM00662	RNA polymerases D
CF386_RS02410	SM00363	S4 RNA-binding domain
CF386_RS02410	SM01390	CF386_RS02410
CF386_RS02475	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CF386_RS02480	SM01374	CF386_RS02480
CF386_RS02500	SM00322	K homology RNA-binding domain
CF386_RS02515	SM01382	CF386_RS02515
CF386_RS02515	SM01383	CF386_RS02515
CF386_RS02535	SM01403	CF386_RS02535
CF386_RS02550	SM00838	Elongation factor G C-terminus
CF386_RS02550	SM00889	Elongation factor G, domain IV
CF386_RS02600	SM00100	Cyclic nucleotide-monophosphate binding domain
CF386_RS02600	SM00419	helix_turn_helix, cAMP Regulatory protein
CF386_RS02605	SM01150	CF386_RS02605
CF386_RS02700	SM00487	DEAD-like helicases superfamily
CF386_RS02700	SM00490	helicase superfamily c-terminal domain
CF386_RS02715	SM00382	ATPases associated with a variety of cellular activities
CF386_RS02715	SM01086	C-terminal, D2-small domain, of ClpB protein
CF386_RS02755	SM00448	cheY-homologous receiver domain
CF386_RS02755	SM00862	Transcriptional regulatory protein, C terminal
CF386_RS02765	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS02780	SM00971	Serine acetyltransferase, N-terminal
CF386_RS02795	SM00450	Rhodanese Homology Domain
CF386_RS02850	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CF386_RS02850	SM01232	CF386_RS02850
CF386_RS02885	SM00072	Guanylate kinase homologues.
CF386_RS02890	SM01409	CF386_RS02890
CF386_RS02895	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CF386_RS02895	SM00954	Region found in RelA / SpoT proteins
CF386_RS02905	SM00487	DEAD-like helicases superfamily
CF386_RS02905	SM00490	helicase superfamily c-terminal domain
CF386_RS02910	SM00984	UDP binding domain
CF386_RS02925	SM00382	ATPases associated with a variety of cellular activities
CF386_RS02925	SM00962	SRP54-type protein, GTPase domain
CF386_RS02925	SM00963	SRP54-type protein, helical bundle domain
CF386_RS02960	SM00357	Cold shock protein domain
CF386_RS02960	SM00382	ATPases associated with a variety of cellular activities
CF386_RS02960	SM00959	Rho termination factor, N-terminal domain
CF386_RS02970	SM00487	DEAD-like helicases superfamily
CF386_RS02970	SM00490	helicase superfamily c-terminal domain
CF386_RS03115	SM01001	AIR carboxylase
CF386_RS03225	SM00382	ATPases associated with a variety of cellular activities
CF386_RS03230	SM00984	UDP binding domain
CF386_RS03265	SM00382	ATPases associated with a variety of cellular activities
CF386_RS03305	SM00470	ParB-like nuclease domain
CF386_RS03320	SM01228	CF386_RS03320
CF386_RS03340	SM01234	CF386_RS03340
CF386_RS03355	SM00382	ATPases associated with a variety of cellular activities
CF386_RS03365	SM00062	Bacterial periplasmic substrate-binding proteins
CF386_RS03370	SM00382	ATPases associated with a variety of cellular activities
CF386_RS03370	SM00760	Bacterial dnaA protein helix-turn-helix domain
CF386_RS03375	SM00480	DNA polymerase III beta subunit
CF386_RS03385	SM00387	Histidine kinase-like ATPases
CF386_RS03385	SM00433	TopoisomeraseII
CF386_RS03405	SM00829	Enoylreductase
CF386_RS03560	SM01219	CF386_RS03560
CF386_RS03620	SM00382	ATPases associated with a variety of cellular activities
CF386_RS03620	SM00448	cheY-homologous receiver domain
CF386_RS03625	SM00091	PAS domain
CF386_RS03625	SM00387	Histidine kinase-like ATPases
CF386_RS03625	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS03630	SM01230	CF386_RS03630
CF386_RS03655	SM00363	S4 RNA-binding domain
CF386_RS03670	SM00382	ATPases associated with a variety of cellular activities
CF386_RS03735	SM00899	CF386_RS03735
CF386_RS03835	SM00360	RNA recognition motif
CF386_RS03905	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CF386_RS03905	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CF386_RS03910	SM00649	Ribosomal protein L11/L12
CF386_RS03935	SM00663	RNA polymerase I subunit A N-terminus
CF386_RS03955	SM00411	bacterial (prokaryotic) histone like domain
CF386_RS03960	SM01209	CF386_RS03960
CF386_RS03960	SM01210	CF386_RS03960
CF386_RS03965	SM00798	AICARFT/IMPCHase bienzyme
CF386_RS03965	SM00851	MGS-like domain
CF386_RS03970	SM00422	helix_turn_helix, mercury resistance
CF386_RS03990	SM00878	Biotin carboxylase C-terminal domain
CF386_RS04020	SM00883	Chaperonin 10 Kd subunit
CF386_RS04035	SM00841	Elongation factor P, C-terminal
CF386_RS04035	SM01185	CF386_RS04035
CF386_RS04045	SM01057	Eukaryotic-type carbonic anhydrase
CF386_RS04090	SM01340	CF386_RS04090
CF386_RS04110	SM00244	prohibitin homologues
CF386_RS04115	SM00244	prohibitin homologues
CF386_RS04120	SM00788	Adenylosuccinate synthetase
CF386_RS04125	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS04125	SM00955	CF386_RS04125
CF386_RS04165	SM01005	Alanine racemase, C-terminal domain
CF386_RS04280	SM00650	Ribosomal RNA adenine dimethylases
CF386_RS04300	SM00271	DnaJ molecular chaperone homology domain
CF386_RS04310	SM00490	helicase superfamily c-terminal domain
CF386_RS04325	SM00670	Large family of predicted nucleotide-binding domains
CF386_RS04330	SM00382	ATPases associated with a variety of cellular activities
CF386_RS04345	SM00917	LeuA allosteric (dimerisation) domain
CF386_RS04375	SM00400	zinc finger
CF386_RS04375	SM00493	CF386_RS04375
CF386_RS04375	SM00766	DNA primase DnaG DnaB-binding
CF386_RS04390	SM00905	Dihydroneopterin aldolase
CF386_RS04400	SM01118	CF386_RS04400
CF386_RS04455	SM00387	Histidine kinase-like ATPases
CF386_RS04455	SM00433	TopoisomeraseII
CF386_RS04460	SM00434	DNA Topoisomerase IV
CF386_RS04570	SM00363	S4 RNA-binding domain
CF386_RS04595	SM00091	PAS domain
CF386_RS04595	SM00387	Histidine kinase-like ATPases
CF386_RS04595	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS04595	SM00448	cheY-homologous receiver domain
CF386_RS04600	SM00448	cheY-homologous receiver domain
CF386_RS04600	SM00862	Transcriptional regulatory protein, C terminal
CF386_RS04630	SM00986	Uracil DNA glycosylase superfamily
CF386_RS04630	SM00987	UreE urease accessory protein, C-terminal domain 
CF386_RS04655	SM00490	helicase superfamily c-terminal domain
CF386_RS04660	SM00487	DEAD-like helicases superfamily
CF386_RS04695	SM00927	DNA mismatch repair enzyme MutH
CF386_RS04735	SM00904	Riboflavin kinase
CF386_RS04770	SM00851	MGS-like domain
CF386_RS04770	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CF386_RS04790	SM01103	CF386_RS04790
CF386_RS04800	SM00382	ATPases associated with a variety of cellular activities
CF386_RS04835	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS04835	SM00322	K homology RNA-binding domain
CF386_RS04855	SM01387	CF386_RS04855
CF386_RS04860	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS04860	SM00322	K homology RNA-binding domain
CF386_RS04895	SM00382	ATPases associated with a variety of cellular activities
CF386_RS04900	SM00382	ATPases associated with a variety of cellular activities
CF386_RS04955	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CF386_RS04960	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CF386_RS04965	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CF386_RS05015	SM00382	ATPases associated with a variety of cellular activities
CF386_RS05080	SM00448	cheY-homologous receiver domain
CF386_RS05080	SM00862	Transcriptional regulatory protein, C terminal
CF386_RS05085	SM00091	PAS domain
CF386_RS05085	SM00387	Histidine kinase-like ATPases
CF386_RS05085	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS05105	SM00382	ATPases associated with a variety of cellular activities
CF386_RS05140	SM01323	CF386_RS05140
CF386_RS05175	SM00271	DnaJ molecular chaperone homology domain
CF386_RS05230	SM00564	beta-propeller repeat
CF386_RS05255	SM00116	Domain in cystathionine beta-synthase and other proteins.
CF386_RS05255	SM01240	CF386_RS05255
CF386_RS05270	SM01211	CF386_RS05270
CF386_RS05275	SM00938	Nitrogen regulatory protein P-II
CF386_RS05315	SM00861	Transketolase, pyrimidine binding domain
CF386_RS05375	SM00900	CF386_RS05375
CF386_RS05420	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CF386_RS05460	SM00271	DnaJ molecular chaperone homology domain
CF386_RS05495	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CF386_RS05500	SM00292	breast cancer carboxy-terminal domain
CF386_RS05500	SM00532	Ligase N family
CF386_RS05600	SM00344	helix_turn_helix ASNC type
CF386_RS05635	SM00382	ATPases associated with a variety of cellular activities
CF386_RS05645	SM00493	CF386_RS05645
CF386_RS05650	SM00387	Histidine kinase-like ATPases
CF386_RS05765	SM00861	Transketolase, pyrimidine binding domain
CF386_RS05780	SM00881	CoA binding domain
CF386_RS05790	SM00836	DALR anticodon binding domain
CF386_RS05790	SM01016	Arginyl tRNA synthetase N terminal dom
CF386_RS05795	SM00487	DEAD-like helicases superfamily
CF386_RS05795	SM00491	CF386_RS05795
CF386_RS05805	SM00474	3'-5' exonuclease
CF386_RS05890	SM00840	CF386_RS05890
CF386_RS05950	SM00382	ATPases associated with a variety of cellular activities
CF386_RS05955	SM00357	Cold shock protein domain
CF386_RS05975	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CF386_RS05980	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06075	SM00481	DNA polymerase alpha chain like domain
CF386_RS06085	SM00363	S4 RNA-binding domain
CF386_RS06135	SM00434	DNA Topoisomerase IV
CF386_RS06155	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS06160	SM00411	bacterial (prokaryotic) histone like domain
CF386_RS06170	SM00028	Tetratricopeptide repeats
CF386_RS06175	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CF386_RS06185	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06200	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06210	SM00387	Histidine kinase-like ATPases
CF386_RS06215	SM00448	cheY-homologous receiver domain
CF386_RS06215	SM00862	Transcriptional regulatory protein, C terminal
CF386_RS06275	SM00487	DEAD-like helicases superfamily
CF386_RS06275	SM00490	helicase superfamily c-terminal domain
CF386_RS06275	SM00982	CF386_RS06275
CF386_RS06275	SM01058	CarD-like/TRCF domain
CF386_RS06300	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06355	SM00729	Elongator protein 3, MiaB family, Radical SAM
CF386_RS06355	SM00876	Biotin and Thiamin Synthesis associated domain
CF386_RS06380	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06395	SM00062	Bacterial periplasmic substrate-binding proteins
CF386_RS06420	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06465	SM00858	CF386_RS06465
CF386_RS06485	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06500	SM00829	Enoylreductase
CF386_RS06505	SM00895	CF386_RS06505
CF386_RS06560	SM00487	DEAD-like helicases superfamily
CF386_RS06560	SM00490	helicase superfamily c-terminal domain
CF386_RS06565	SM00886	Stress responsive A/B Barrel Domain
CF386_RS06570	SM00363	S4 RNA-binding domain
CF386_RS06580	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06610	SM00851	MGS-like domain
CF386_RS06615	SM00838	Elongation factor G C-terminus
CF386_RS06615	SM00889	Elongation factor G, domain IV
CF386_RS06625	SM00014	Acid phosphatase homologues
CF386_RS06655	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06675	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS06690	SM01004	Delta-aminolevulinic acid dehydratase
CF386_RS06730	SM00479	CF386_RS06730
CF386_RS06735	SM00731	SprT homologues.
CF386_RS06740	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06760	SM01144	CF386_RS06760
CF386_RS06795	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CF386_RS06800	SM00866	CF386_RS06800
CF386_RS06825	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06830	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06840	SM00072	Guanylate kinase homologues.
CF386_RS06845	SM00849	Metallo-beta-lactamase superfamily
CF386_RS06870	SM00919	Malic enzyme, NAD binding domain
CF386_RS06870	SM01274	CF386_RS06870
CF386_RS06880	SM00382	ATPases associated with a variety of cellular activities
CF386_RS06880	SM00487	DEAD-like helicases superfamily
CF386_RS06880	SM00490	helicase superfamily c-terminal domain
CF386_RS06880	SM00847	Helicase associated domain (HA2)  Add an annotation
CF386_RS06905	SM00945	ProQ/FINO family
CF386_RS06915	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CF386_RS06915	SM00245	tail specific protease
CF386_RS06985	SM00062	Bacterial periplasmic substrate-binding proteins
CF386_RS06995	SM00347	helix_turn_helix multiple antibiotic resistance protein
CF386_RS07065	SM00382	ATPases associated with a variety of cellular activities
CF386_RS07090	SM00487	DEAD-like helicases superfamily
CF386_RS07090	SM00490	helicase superfamily c-terminal domain
CF386_RS07195	SM00850	LytTr DNA-binding domain
CF386_RS07220	SM00495	Chitin-binding domain type 3
CF386_RS07225	SM00382	ATPases associated with a variety of cellular activities
CF386_RS07235	SM00382	ATPases associated with a variety of cellular activities
CF386_RS07255	SM00411	bacterial (prokaryotic) histone like domain
CF386_RS07260	SM00873	B3/4 domain
CF386_RS07260	SM00874	tRNA synthetase B5 domain
CF386_RS07260	SM00896	Ferredoxin-fold anticodon binding domain
CF386_RS07285	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CF386_RS07295	SM00052	Putative diguanylate phosphodiesterase
CF386_RS07400	SM00530	Helix-turn-helix XRE-family like proteins 
CF386_RS07410	SM00606	Cellulose Binding Domain Type IV
CF386_RS07455	SM00850	LytTr DNA-binding domain
CF386_RS07485	SM00344	helix_turn_helix ASNC type
CF386_RS07515	SM00729	Elongator protein 3, MiaB family, Radical SAM
CF386_RS07755	SM00382	ATPases associated with a variety of cellular activities
CF386_RS07795	SM00382	ATPases associated with a variety of cellular activities
CF386_RS07805	SM00487	DEAD-like helicases superfamily
CF386_RS07805	SM00490	helicase superfamily c-terminal domain
CF386_RS07810	SM00382	ATPases associated with a variety of cellular activities
CF386_RS07895	SM01021	Bacteriorhodopsin-like protein
CF386_RS08005	SM00450	Rhodanese Homology Domain
CF386_RS08040	SM00850	LytTr DNA-binding domain
CF386_RS08050	SM00387	Histidine kinase-like ATPases
CF386_RS08050	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS08050	SM00448	cheY-homologous receiver domain
CF386_RS08060	SM00421	helix_turn_helix, Lux Regulon
CF386_RS08060	SM00448	cheY-homologous receiver domain
CF386_RS08085	SM00465	GIY-YIG type nucleases (URI domain)
CF386_RS08115	SM00850	LytTr DNA-binding domain
CF386_RS08125	SM00382	ATPases associated with a variety of cellular activities
CF386_RS08145	SM00850	LytTr DNA-binding domain
CF386_RS08290	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS08295	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS08305	SM00564	beta-propeller repeat
CF386_RS08315	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CF386_RS08345	SM00671	Sel1-like repeats.
CF386_RS08400	SM00850	LytTr DNA-binding domain
CF386_RS08430	SM00850	LytTr DNA-binding domain
CF386_RS08465	SM00850	LytTr DNA-binding domain
CF386_RS08475	SM00850	LytTr DNA-binding domain
CF386_RS08485	SM00850	LytTr DNA-binding domain
CF386_RS08525	SM00671	Sel1-like repeats.
CF386_RS08635	SM00487	DEAD-like helicases superfamily
CF386_RS08650	SM00487	DEAD-like helicases superfamily
CF386_RS08650	SM00490	helicase superfamily c-terminal domain
CF386_RS08660	SM00487	DEAD-like helicases superfamily
CF386_RS08705	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CF386_RS08720	SM00318	Staphylococcal nuclease homologues
CF386_RS08815	SM00953	CF386_RS08815
CF386_RS08895	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS08965	SM00850	LytTr DNA-binding domain
CF386_RS08970	SM00850	LytTr DNA-binding domain
CF386_RS09005	SM00850	LytTr DNA-binding domain
CF386_RS09020	SM00421	helix_turn_helix, Lux Regulon
CF386_RS09025	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS09125	SM00014	Acid phosphatase homologues
CF386_RS09255	SM00850	LytTr DNA-binding domain
CF386_RS09290	SM00382	ATPases associated with a variety of cellular activities
CF386_RS09340	SM00354	helix_turn _helix lactose operon repressor
CF386_RS09410	SM00346	helix_turn_helix isocitrate lyase regulation
CF386_RS09415	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CF386_RS09445	SM00850	LytTr DNA-binding domain
CF386_RS09455	SM00850	LytTr DNA-binding domain
CF386_RS09460	SM00850	LytTr DNA-binding domain
CF386_RS09505	SM00387	Histidine kinase-like ATPases
CF386_RS09505	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS09510	SM00448	cheY-homologous receiver domain
CF386_RS09510	SM00862	Transcriptional regulatory protein, C terminal
CF386_RS09675	SM00850	LytTr DNA-binding domain
CF386_RS09720	SM00422	helix_turn_helix, mercury resistance
CF386_RS09770	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS09780	SM00382	ATPases associated with a variety of cellular activities
CF386_RS09790	SM00850	LytTr DNA-binding domain
CF386_RS09795	SM00850	LytTr DNA-binding domain
CF386_RS09820	SM00487	DEAD-like helicases superfamily
CF386_RS09820	SM00490	helicase superfamily c-terminal domain
CF386_RS09825	SM00062	Bacterial periplasmic substrate-binding proteins
CF386_RS09860	SM00226	Low molecular weight phosphatase family
CF386_RS09875	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CF386_RS09900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CF386_RS09920	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS09920	SM00871	Bacterial transcription activator, effector binding domain
CF386_RS10010	SM00671	Sel1-like repeats.
CF386_RS10040	SM00479	CF386_RS10040
CF386_RS10060	SM00220	Serine/Threonine protein kinases, catalytic domain
CF386_RS10065	SM00220	Serine/Threonine protein kinases, catalytic domain
CF386_RS10160	SM00155	Phospholipase D. Active site motifs.
CF386_RS10265	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS10280	SM00387	Histidine kinase-like ATPases
CF386_RS10280	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS10280	SM00448	cheY-homologous receiver domain
CF386_RS10285	SM00421	helix_turn_helix, Lux Regulon
CF386_RS10285	SM00448	cheY-homologous receiver domain
CF386_RS10300	SM00382	ATPases associated with a variety of cellular activities
CF386_RS10315	SM00450	Rhodanese Homology Domain
CF386_RS10395	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS10445	SM00796	Allophanate hydrolase subunit 1
CF386_RS10455	SM00797	Allophanate hydrolase subunit 2
CF386_RS10515	SM00448	cheY-homologous receiver domain
CF386_RS10520	SM00387	Histidine kinase-like ATPases
CF386_RS10520	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS10645	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS10680	SM00450	Rhodanese Homology Domain
CF386_RS10705	SM00420	helix_turn_helix, Deoxyribose operon repressor
CF386_RS10735	SM00382	ATPases associated with a variety of cellular activities
CF386_RS10750	SM00342	helix_turn_helix, arabinose operon control protein
CF386_RS10790	SM00422	helix_turn_helix, mercury resistance
CF386_RS10810	SM00043	Cystatin-like domain
CF386_RS10825	SM00563	Phosphate acyltransferases
CF386_RS10850	SM00448	cheY-homologous receiver domain
CF386_RS10850	SM00862	Transcriptional regulatory protein, C terminal
CF386_RS10855	SM00387	Histidine kinase-like ATPases
CF386_RS10855	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS10925	SM00387	Histidine kinase-like ATPases
CF386_RS10925	SM00388	His Kinase A (phosphoacceptor) domain
CF386_RS10930	SM00448	cheY-homologous receiver domain
CF386_RS10930	SM00862	Transcriptional regulatory protein, C terminal
CF386_RS11020	SM00422	helix_turn_helix, mercury resistance
CF386_RS11075	SM00463	Small MutS-related domain
CF386_RS11080	SM00155	Phospholipase D. Active site motifs.
CF386_RS11090	SM00354	helix_turn _helix lactose operon repressor
CF386_RS11150	SM01131	CF386_RS11150
CF386_RS11175	SM00420	helix_turn_helix, Deoxyribose operon repressor
CF386_RS11175	SM01134	CF386_RS11175
CF386_RS11405	SM00382	ATPases associated with a variety of cellular activities
CF386_RS11440	SM00563	Phosphate acyltransferases
CF386_RS11500	SM00825	Beta-ketoacyl synthase
CF386_RS11515	SM00825	Beta-ketoacyl synthase
CF386_RS11590	SM00822	CF386_RS11590
CF386_RS11650	SM00354	helix_turn _helix lactose operon repressor
CF386_RS11685	SM00422	helix_turn_helix, mercury resistance
CF386_RS11700	SM00318	Staphylococcal nuclease homologues
CF386_RS11745	SM00470	ParB-like nuclease domain
CF386_RS11795	SM00357	Cold shock protein domain
CF386_RS11845	SM00563	Phosphate acyltransferases
CF386_RS11860	SM00382	ATPases associated with a variety of cellular activities
CF386_RS11885	SM00563	Phosphate acyltransferases
CF386_RS11895	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CF386_RS11895	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CF386_RS11910	SM00671	Sel1-like repeats.
CF386_RS11945	SM01119	CF386_RS11945
CF386_RS11950	SM01007	Class II Aldolase and Adducin N-terminal domain
CF386_RS11955	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CF386_RS12070	SM00825	Beta-ketoacyl synthase
CF386_RS12115	SM00316	Ribosomal protein S1-like RNA-binding domain
CF386_RS12115	SM00955	CF386_RS12115
CF386_RS12120	SM00487	DEAD-like helicases superfamily
CF386_RS12120	SM00490	helicase superfamily c-terminal domain
CF386_RS12175	SM00257	Lysin motif
CF386_RS12180	SM00267	diguanylate cyclase
CF386_RS12180	SM00448	cheY-homologous receiver domain
CF386_RS12245	SM00829	Enoylreductase
CF386_RS12315	SM00822	CF386_RS12315
CF386_RS12420	SM00946	Prolyl-tRNA synthetase, C-terminal
CF386_RS12465	SM01240	CF386_RS12465
CF386_RS12470	SM00244	prohibitin homologues
CF386_RS12580	SM00450	Rhodanese Homology Domain
CF386_RS12605	SM00671	Sel1-like repeats.
