locus-tag class description CFK40_RS00005 PF00884 Sulfatase CFK40_RS00030 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS00030 PF00501 AMP-binding enzyme CFK40_RS00035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS00035 PF03466 LysR substrate binding domain CFK40_RS00040 PF03601 Conserved hypothetical protein 698 CFK40_RS00050 PF07690 Major Facilitator Superfamily CFK40_RS00060 PF00565 Staphylococcal nuclease homologue CFK40_RS00060 PF00149 Calcineurin-like phosphoesterase CFK40_RS00060 PF00746 LPXTG cell wall anchor motif CFK40_RS00060 PF02872 5'-nucleotidase, C-terminal domain CFK40_RS00070 PF04234 CopC domain CFK40_RS00080 PF04229 GrpB protein CFK40_RS00080 PF13673 Acetyltransferase (GNAT) domain CFK40_RS00085 PF13411 MerR HTH family regulatory protein CFK40_RS00085 PF07739 TipAS antibiotic-recognition domain CFK40_RS00090 PF07690 Major Facilitator Superfamily CFK40_RS00105 PF11009 Protein of unknown function (DUF2847) CFK40_RS00115 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS00120 PF01740 STAS domain CFK40_RS00120 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain CFK40_RS00145 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS00155 PF00581 Rhodanese-like domain CFK40_RS00160 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CFK40_RS00170 PF00583 Acetyltransferase (GNAT) family CFK40_RS00180 PF10672 S-adenosylmethionine-dependent methyltransferase CFK40_RS00180 PF17785 PUA-like domain CFK40_RS00185 PF01476 LysM domain CFK40_RS00185 PF00704 Glycosyl hydrolases family 18 CFK40_RS00190 PF03070 TENA/THI-4/PQQC family CFK40_RS00200 PF02581 Thiamine monophosphate synthase CFK40_RS00205 PF02110 Hydroxyethylthiazole kinase family CFK40_RS00210 PF08543 Phosphomethylpyrimidine kinase CFK40_RS00225 PF00300 Histidine phosphatase superfamily (branch 1) CFK40_RS00225 PF00293 NUDIX domain CFK40_RS00235 PF12464 Maltose acetyltransferase CFK40_RS00235 PF14602 Hexapeptide repeat of succinyl-transferase CFK40_RS00245 PF13769 Virulence factor CFK40_RS00245 PF08712 Scaffold protein Nfu/NifU N terminal CFK40_RS00250 PF00248 Aldo/keto reductase family CFK40_RS00260 PF00080 Copper/zinc superoxide dismutase (SODC) CFK40_RS00270 PF00873 AcrB/AcrD/AcrF family CFK40_RS00275 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS00280 PF03741 Integral membrane protein TerC family CFK40_RS00285 PF07729 FCD domain CFK40_RS00285 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS00290 PF05525 Branched-chain amino acid transport protein CFK40_RS00295 PF03372 Endonuclease/Exonuclease/phosphatase family CFK40_RS00300 PF12787 EcsC protein family CFK40_RS00305 PF01797 Transposase IS200 like CFK40_RS00315 PF17676 LD-carboxypeptidase C-terminal domain CFK40_RS00315 PF02016 LD-carboxypeptidase N-terminal domain CFK40_RS00320 PF03167 Uracil DNA glycosylase superfamily CFK40_RS00325 PF14698 Argininosuccinate lyase C-terminal CFK40_RS00325 PF00206 Lyase CFK40_RS00330 PF00764 Arginosuccinate synthase CFK40_RS00335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFK40_RS00335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFK40_RS00340 PF01472 PUA domain CFK40_RS00340 PF00696 Amino acid kinase family CFK40_RS00345 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFK40_RS00350 PF01717 Cobalamin-independent synthase, Catalytic domain CFK40_RS00355 PF00069 Protein kinase domain CFK40_RS00365 PF02416 mttA/Hcf106 family CFK40_RS00370 PF00902 Sec-independent protein translocase protein (TatC) CFK40_RS00385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS00385 PF00005 ABC transporter CFK40_RS00390 PF00005 ABC transporter CFK40_RS00390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS00395 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS00395 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS00400 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS00405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS00415 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS00440 PF07556 Protein of unknown function (DUF1538) CFK40_RS00445 PF00589 Phage integrase family CFK40_RS00455 PF03358 NADPH-dependent FMN reductase CFK40_RS00460 PF02627 Carboxymuconolactone decarboxylase family CFK40_RS00470 PF00857 Isochorismatase family CFK40_RS00475 PF01037 Lrp/AsnC ligand binding domain CFK40_RS00480 PF00403 Heavy-metal-associated domain CFK40_RS00485 PF00403 Heavy-metal-associated domain CFK40_RS00490 PF02583 Metal-sensitive transcriptional repressor CFK40_RS00495 PF11975 Family 4 glycosyl hydrolase C-terminal domain CFK40_RS00495 PF02056 Family 4 glycosyl hydrolase CFK40_RS00500 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS00500 PF01380 SIS domain CFK40_RS00515 PF13460 NAD(P)H-binding CFK40_RS00525 PF00106 short chain dehydrogenase CFK40_RS00530 PF07995 Glucose / Sorbosone dehydrogenase CFK40_RS00535 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS00535 PF00107 Zinc-binding dehydrogenase CFK40_RS00540 PF13411 MerR HTH family regulatory protein CFK40_RS00545 PF07690 Major Facilitator Superfamily CFK40_RS00550 PF03466 LysR substrate binding domain CFK40_RS00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS00575 PF08721 TnsA endonuclease C terminal CFK40_RS00575 PF08722 TnsA endonuclease N terminal CFK40_RS00580 PF01380 SIS domain CFK40_RS00585 PF00326 Prolyl oligopeptidase family CFK40_RS00590 PF00005 ABC transporter CFK40_RS00595 PF02687 FtsX-like permease family CFK40_RS00600 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS00600 PF00672 HAMP domain CFK40_RS00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS00605 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS00605 PF00072 Response regulator receiver domain CFK40_RS00610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFK40_RS00610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFK40_RS00610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFK40_RS00610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFK40_RS00615 PF07949 YbbR-like protein CFK40_RS00620 PF02457 DisA bacterial checkpoint controller nucleotide-binding CFK40_RS00625 PF13490 Putative zinc-finger CFK40_RS00630 PF08281 Sigma-70, region 4 CFK40_RS00630 PF04542 Sigma-70 region 2 CFK40_RS00640 PF00491 Arginase family CFK40_RS00645 PF00288 GHMP kinases N terminal domain CFK40_RS00645 PF08544 GHMP kinases C terminal CFK40_RS00655 PF00288 GHMP kinases N terminal domain CFK40_RS00655 PF10509 Galactokinase galactose-binding signature CFK40_RS00655 PF08544 GHMP kinases C terminal CFK40_RS00660 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CFK40_RS00695 PF00589 Phage integrase family CFK40_RS00695 PF02899 Phage integrase, N-terminal SAM-like domain CFK40_RS00740 PF01522 Polysaccharide deacetylase CFK40_RS00750 PF17898 Spore germination GerD central core domain CFK40_RS00755 PF10609 NUBPL iron-transfer P-loop NTPase CFK40_RS00760 PF01520 N-acetylmuramoyl-L-alanine amidase CFK40_RS00790 PF00380 Ribosomal protein S9/S16 CFK40_RS00795 PF00572 Ribosomal protein L13 CFK40_RS00800 PF01416 tRNA pseudouridine synthase CFK40_RS00805 PF02361 Cobalt transport protein CFK40_RS00810 PF00005 ABC transporter CFK40_RS00815 PF00005 ABC transporter CFK40_RS00820 PF01196 Ribosomal protein L17 CFK40_RS00825 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CFK40_RS00825 PF01000 RNA polymerase Rpb3/RpoA insert domain CFK40_RS00825 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CFK40_RS00830 PF00411 Ribosomal protein S11 CFK40_RS00835 PF00416 Ribosomal protein S13/S18 CFK40_RS00840 PF00444 Ribosomal protein L36 CFK40_RS00845 PF01176 Translation initiation factor 1A / IF-1 CFK40_RS00855 PF05191 Adenylate kinase, active site lid CFK40_RS00860 PF00344 SecY translocase CFK40_RS00865 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CFK40_RS00870 PF00327 Ribosomal protein L30p/L7e CFK40_RS00875 PF00333 Ribosomal protein S5, N-terminal domain CFK40_RS00875 PF03719 Ribosomal protein S5, C-terminal domain CFK40_RS00880 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CFK40_RS00885 PF00347 Ribosomal protein L6 CFK40_RS00890 PF00410 Ribosomal protein S8 CFK40_RS00895 PF00253 Ribosomal protein S14p/S29e CFK40_RS00900 PF00673 ribosomal L5P family C-terminus CFK40_RS00900 PF00281 Ribosomal protein L5 CFK40_RS00905 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CFK40_RS00905 PF00467 KOW motif CFK40_RS00910 PF00238 Ribosomal protein L14p/L23e CFK40_RS00915 PF00366 Ribosomal protein S17 CFK40_RS00920 PF00831 Ribosomal L29 protein CFK40_RS00925 PF00252 Ribosomal protein L16p/L10e CFK40_RS00930 PF07650 KH domain CFK40_RS00930 PF00189 Ribosomal protein S3, C-terminal domain CFK40_RS00935 PF00237 Ribosomal protein L22p/L17e CFK40_RS00940 PF00203 Ribosomal protein S19 CFK40_RS00945 PF00181 Ribosomal Proteins L2, RNA binding domain CFK40_RS00945 PF03947 Ribosomal Proteins L2, C-terminal domain CFK40_RS00950 PF00276 Ribosomal protein L23 CFK40_RS00955 PF00573 Ribosomal protein L4/L1 family CFK40_RS00960 PF00297 Ribosomal protein L3 CFK40_RS00965 PF00338 Ribosomal protein S10p/S20e CFK40_RS00975 PF03144 Elongation factor Tu domain 2 CFK40_RS00975 PF03143 Elongation factor Tu C-terminal domain CFK40_RS00975 PF00009 Elongation factor Tu GTP binding domain CFK40_RS00980 PF03764 Elongation factor G, domain IV CFK40_RS00980 PF03144 Elongation factor Tu domain 2 CFK40_RS00980 PF00679 Elongation factor G C-terminus CFK40_RS00980 PF00009 Elongation factor Tu GTP binding domain CFK40_RS00980 PF14492 Elongation Factor G, domain II CFK40_RS00985 PF00177 Ribosomal protein S7p/S5e CFK40_RS00990 PF00164 Ribosomal protein S12/S23 CFK40_RS00995 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CFK40_RS01000 PF00623 RNA polymerase Rpb1, domain 2 CFK40_RS01000 PF04998 RNA polymerase Rpb1, domain 5 CFK40_RS01000 PF05000 RNA polymerase Rpb1, domain 4 CFK40_RS01000 PF04983 RNA polymerase Rpb1, domain 3 CFK40_RS01000 PF04997 RNA polymerase Rpb1, domain 1 CFK40_RS01005 PF04560 RNA polymerase Rpb2, domain 7 CFK40_RS01005 PF00562 RNA polymerase Rpb2, domain 6 CFK40_RS01005 PF10385 RNA polymerase beta subunit external 1 domain CFK40_RS01005 PF04565 RNA polymerase Rpb2, domain 3 CFK40_RS01005 PF04563 RNA polymerase beta subunit CFK40_RS01005 PF04561 RNA polymerase Rpb2, domain 2 CFK40_RS01010 PF05175 Methyltransferase small domain CFK40_RS01015 PF00542 Ribosomal protein L7/L12 C-terminal domain CFK40_RS01015 PF16320 Ribosomal protein L7/L12 dimerisation domain CFK40_RS01020 PF00466 Ribosomal protein L10 CFK40_RS01025 PF00687 Ribosomal protein L1p/L10e family CFK40_RS01030 PF03946 Ribosomal protein L11, N-terminal domain CFK40_RS01030 PF00298 Ribosomal protein L11, RNA binding domain CFK40_RS01035 PF02357 Transcription termination factor nusG CFK40_RS01035 PF00467 KOW motif CFK40_RS01040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CFK40_RS01045 PF00471 Ribosomal protein L33 CFK40_RS01050 PF04542 Sigma-70 region 2 CFK40_RS01050 PF08281 Sigma-70, region 4 CFK40_RS01055 PF05991 YacP-like NYN domain CFK40_RS01060 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFK40_RS01060 PF00588 SpoU rRNA Methylase family CFK40_RS01065 PF00636 Ribonuclease III domain CFK40_RS01070 PF09190 DALR domain CFK40_RS01070 PF01406 tRNA synthetases class I (C) catalytic domain CFK40_RS01075 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS01080 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFK40_RS01090 PF18073 Rubredoxin metal binding domain CFK40_RS01095 PF00004 ATPase family associated with various cellular activities (AAA) CFK40_RS01095 PF07724 AAA domain (Cdc48 subfamily) CFK40_RS01095 PF17871 AAA lid domain CFK40_RS01095 PF02861 Clp amino terminal domain, pathogenicity island component CFK40_RS01095 PF10431 C-terminal, D2-small domain, of ClpB protein CFK40_RS01100 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CFK40_RS01105 PF02151 UvrB/uvrC motif CFK40_RS01110 PF17727 CtsR C-terminal dimerization domain CFK40_RS01110 PF05848 CtsR N-terminal HTH domain CFK40_RS01115 PF02308 MgtC family CFK40_RS01195 PF00152 tRNA synthetases class II (D, K and N) CFK40_RS01195 PF01336 OB-fold nucleic acid binding domain CFK40_RS01200 PF01381 Helix-turn-helix CFK40_RS01205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CFK40_RS01210 PF02152 Dihydroneopterin aldolase CFK40_RS01215 PF00809 Pterin binding enzyme CFK40_RS01220 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS01230 PF01430 Hsp33 protein CFK40_RS01235 PF03309 Type III pantothenate kinase CFK40_RS01240 PF01434 Peptidase family M41 CFK40_RS01240 PF17862 AAA+ lid domain CFK40_RS01240 PF00004 ATPase family associated with various cellular activities (AAA) CFK40_RS01240 PF06480 FtsH Extracellular CFK40_RS01245 PF00156 Phosphoribosyl transferase domain CFK40_RS01250 PF01171 PP-loop family CFK40_RS01250 PF11734 TilS substrate C-terminal domain CFK40_RS01255 PF00069 Protein kinase domain CFK40_RS01260 PF00092 von Willebrand factor type A domain CFK40_RS01265 PF07228 Stage II sporulation protein E (SpoIIE) CFK40_RS01275 PF00575 S1 RNA binding domain CFK40_RS01285 PF09578 Spore cortex protein YabQ (Spore_YabQ) CFK40_RS01290 PF07873 YabP family CFK40_RS01300 PF01047 MarR family CFK40_RS01305 PF07690 Major Facilitator Superfamily CFK40_RS01310 PF01479 S4 domain CFK40_RS01315 PF03819 MazG nucleotide pyrophosphohydrolase domain CFK40_RS01315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFK40_RS01320 PF01943 Polysaccharide biosynthesis protein CFK40_RS01320 PF14667 Polysaccharide biosynthesis C-terminal domain CFK40_RS01325 PF15714 Stage V sporulation protein T C-terminal, transcription factor CFK40_RS01325 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CFK40_RS01330 PF02559 CarD-like/TRCF domain CFK40_RS01330 PF00271 Helicase conserved C-terminal domain CFK40_RS01330 PF00270 DEAD/DEAH box helicase CFK40_RS01330 PF17757 UvrB interaction domain CFK40_RS01330 PF03461 TRCF domain CFK40_RS01335 PF10955 Protein of unknown function (DUF2757) CFK40_RS01340 PF01195 Peptidyl-tRNA hydrolase CFK40_RS01345 PF01386 Ribosomal L25p family CFK40_RS01345 PF14693 Ribosomal protein TL5, C-terminal domain CFK40_RS01350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CFK40_RS01350 PF14572 Phosphoribosyl synthetase-associated domain CFK40_RS01355 PF14602 Hexapeptide repeat of succinyl-transferase CFK40_RS01355 PF00483 Nucleotidyl transferase CFK40_RS01355 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS01360 PF04026 SpoVG CFK40_RS01365 PF00156 Phosphoribosyl transferase domain CFK40_RS01365 PF09182 Bacterial purine repressor, N-terminal CFK40_RS01370 PF00288 GHMP kinases N terminal domain CFK40_RS01370 PF08544 GHMP kinases C terminal CFK40_RS01375 PF00269 Small, acid-soluble spore proteins, alpha/beta type CFK40_RS01380 PF06257 Biofilm formation stimulator VEG CFK40_RS01385 PF05582 YabG peptidase U57 CFK40_RS01390 PF00398 Ribosomal RNA adenine dimethylase CFK40_RS01395 PF13331 Domain of unknown function (DUF4093) CFK40_RS01395 PF13662 Toprim domain CFK40_RS01400 PF03990 G5-linked-Ubiquitin-like domain CFK40_RS01400 PF07501 G5 domain CFK40_RS01400 PF06725 3D domain CFK40_RS01405 PF01026 TatD related DNase CFK40_RS01410 PF08264 Anticodon-binding domain of tRNA CFK40_RS01410 PF01588 Putative tRNA binding domain CFK40_RS01410 PF09334 tRNA synthetases class I (M) CFK40_RS01415 PF18277 AbrB C-terminal domain CFK40_RS01415 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CFK40_RS01420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFK40_RS01425 PF01541 GIY-YIG catalytic domain CFK40_RS01430 PF05175 Methyltransferase small domain CFK40_RS01435 PF06156 Initiation control protein YabA CFK40_RS01440 PF04468 PSP1 C-terminal conserved region CFK40_RS01445 PF09115 DNA polymerase III, delta subunit, C terminal CFK40_RS01450 PF03885 Protein of unknown function (DUF327) CFK40_RS01455 PF06153 Cyclic-di-AMP receptor CFK40_RS01460 PF02223 Thymidylate kinase CFK40_RS01465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CFK40_RS01465 PF01276 Orn/Lys/Arg decarboxylase, major domain CFK40_RS01475 PF10764 Inhibitor of sigma-G Gin CFK40_RS01480 PF07441 SigmaK-factor processing regulatory protein BofA CFK40_RS01490 PF02132 RecR protein CFK40_RS01490 PF13662 Toprim domain CFK40_RS01495 PF02575 YbaB/EbfC DNA-binding family CFK40_RS01500 PF12169 DNA polymerase III subunits gamma and tau domain III CFK40_RS01510 PF14437 MafB19-like deaminase CFK40_RS01515 PF00857 Isochorismatase family CFK40_RS01520 PF00704 Glycosyl hydrolases family 18 CFK40_RS01520 PF01476 LysM domain CFK40_RS01525 PF01965 DJ-1/PfpI family CFK40_RS01530 PF00501 AMP-binding enzyme CFK40_RS01530 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS01545 PF01712 Deoxynucleoside kinase CFK40_RS01550 PF01712 Deoxynucleoside kinase CFK40_RS01555 PF14748 Pyrroline-5-carboxylate reductase dimerisation CFK40_RS01555 PF03807 NADP oxidoreductase coenzyme F420-dependent CFK40_RS01565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFK40_RS01565 PF02403 Seryl-tRNA synthetase N-terminal domain CFK40_RS01570 PF01174 SNO glutamine amidotransferase family CFK40_RS01575 PF01680 SOR/SNZ family CFK40_RS01580 PF07943 Penicillin-binding protein 5, C-terminal domain CFK40_RS01580 PF00768 D-alanyl-D-alanine carboxypeptidase CFK40_RS01585 PF00478 IMP dehydrogenase / GMP reductase domain CFK40_RS01585 PF00571 CBS domain CFK40_RS01595 PF14175 YaaC-like Protein CFK40_RS01605 PF00521 DNA gyrase/topoisomerase IV, subunit A CFK40_RS01605 PF03989 DNA gyrase C-terminal domain, beta-propeller CFK40_RS01610 PF01751 Toprim domain CFK40_RS01610 PF00986 DNA gyrase B subunit, carboxyl terminus CFK40_RS01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS01610 PF00204 DNA gyrase B CFK40_RS01615 PF04025 Domain of unknown function (DUF370) CFK40_RS01620 PF02463 RecF/RecN/SMC N terminal domain CFK40_RS01630 PF02767 DNA polymerase III beta subunit, central domain CFK40_RS01630 PF00712 DNA polymerase III beta subunit, N-terminal domain CFK40_RS01630 PF02768 DNA polymerase III beta subunit, C-terminal domain CFK40_RS01635 PF11638 DnaA N-terminal domain CFK40_RS01635 PF08299 Bacterial dnaA protein helix-turn-helix CFK40_RS01635 PF00308 Bacterial dnaA protein CFK40_RS01640 PF00468 Ribosomal protein L34 CFK40_RS01645 PF00825 Ribonuclease P CFK40_RS01650 PF02096 60Kd inner membrane protein CFK40_RS01655 PF01424 R3H domain CFK40_RS01655 PF14804 Jag N-terminus CFK40_RS01660 PF02225 PA domain CFK40_RS01660 PF04389 Peptidase family M28 CFK40_RS01665 PF10396 GTP-binding protein TrmE N-terminus CFK40_RS01665 PF01926 50S ribosome-binding GTPase CFK40_RS01665 PF12631 MnmE helical domain CFK40_RS01670 PF13932 GidA associated domain CFK40_RS01670 PF01134 Glucose inhibited division protein A CFK40_RS01675 PF02527 rRNA small subunit methyltransferase G CFK40_RS01680 PF02195 ParB-like nuclease domain CFK40_RS01680 PF17762 HTH domain found in ParB protein CFK40_RS01685 PF13614 AAA domain CFK40_RS01690 PF02195 ParB-like nuclease domain CFK40_RS01690 PF17762 HTH domain found in ParB protein CFK40_RS01695 PF00266 Aminotransferase class-V CFK40_RS01705 PF06866 Protein of unknown function (DUF1256) CFK40_RS01715 PF00924 Mechanosensitive ion channel CFK40_RS01720 PF06107 Bacterial protein of unknown function (DUF951) CFK40_RS01725 PF01926 50S ribosome-binding GTPase CFK40_RS01725 PF06071 Protein of unknown function (DUF933) CFK40_RS01730 PF01250 Ribosomal protein S6 CFK40_RS01735 PF00436 Single-strand binding protein family CFK40_RS01740 PF01084 Ribosomal protein S18 CFK40_RS01750 PF00005 ABC transporter CFK40_RS01750 PF03459 TOBE domain CFK40_RS01755 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS01775 PF02272 DHHA1 domain CFK40_RS01775 PF01368 DHH family CFK40_RS01780 PF01281 Ribosomal protein L9, N-terminal domain CFK40_RS01780 PF03948 Ribosomal protein L9, C-terminal domain CFK40_RS01785 PF03796 DnaB-like helicase C terminal domain CFK40_RS01785 PF00772 DnaB-like helicase N terminal domain CFK40_RS01790 PF00709 Adenylosuccinate synthetase CFK40_RS01795 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS01795 PF00072 Response regulator receiver domain CFK40_RS01800 PF13426 PAS domain CFK40_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS01800 PF00672 HAMP domain CFK40_RS01800 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS01805 PF07435 YycH protein CFK40_RS01810 PF09648 YycH protein CFK40_RS01815 PF00753 Metallo-beta-lactamase superfamily CFK40_RS01820 PF13180 PDZ domain CFK40_RS01830 PF00664 ABC transporter transmembrane region CFK40_RS01830 PF00005 ABC transporter CFK40_RS01835 PF13302 Acetyltransferase (GNAT) domain CFK40_RS01860 PF01497 Periplasmic binding protein CFK40_RS01865 PF00005 ABC transporter CFK40_RS01870 PF01032 FecCD transport family CFK40_RS01875 PF01032 FecCD transport family CFK40_RS01885 PF13302 Acetyltransferase (GNAT) domain CFK40_RS01920 PF02590 Predicted SPOUT methyltransferase CFK40_RS01990 PF00732 GMC oxidoreductase CFK40_RS01990 PF05199 GMC oxidoreductase CFK40_RS01995 PF00171 Aldehyde dehydrogenase family CFK40_RS02000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS02025 PF06039 Malate:quinone oxidoreductase (Mqo) CFK40_RS02030 PF00583 Acetyltransferase (GNAT) family CFK40_RS02030 PF00795 Carbon-nitrogen hydrolase CFK40_RS02045 PF00293 NUDIX domain CFK40_RS02050 PF00176 SNF2 family N-terminal domain CFK40_RS02050 PF04434 SWIM zinc finger CFK40_RS02050 PF00271 Helicase conserved C-terminal domain CFK40_RS02055 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS02060 PF00005 ABC transporter CFK40_RS02110 PF06798 PrkA serine protein kinase C-terminal domain CFK40_RS02110 PF08298 PrkA AAA domain CFK40_RS02115 PF04285 Protein of unknown function (DUF444) CFK40_RS02130 PF04293 SpoVR like protein CFK40_RS02150 PF14005 YpjP-like protein CFK40_RS02165 PF03741 Integral membrane protein TerC family CFK40_RS02195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFK40_RS02195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFK40_RS02200 PF05853 beta-keto acid cleavage enzyme CFK40_RS02205 PF12802 MarR family CFK40_RS02210 PF00571 CBS domain CFK40_RS02210 PF00005 ABC transporter CFK40_RS02215 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS02220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS02225 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS02230 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CFK40_RS02230 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CFK40_RS02245 PF02583 Metal-sensitive transcriptional repressor CFK40_RS02250 PF13686 DsrE/DsrF/DrsH-like family CFK40_RS02255 PF01206 Sulfurtransferase TusA CFK40_RS02255 PF00581 Rhodanese-like domain CFK40_RS02260 PF00753 Metallo-beta-lactamase superfamily CFK40_RS02260 PF00581 Rhodanese-like domain CFK40_RS02265 PF01206 Sulfurtransferase TusA CFK40_RS02270 PF01925 Sulfite exporter TauE/SafE CFK40_RS02285 PF02683 Cytochrome C biogenesis protein transmembrane region CFK40_RS02290 PF00578 AhpC/TSA family CFK40_RS02295 PF00072 Response regulator receiver domain CFK40_RS02295 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS02300 PF14827 Double sensory domain of two-component sensor kinase CFK40_RS02300 PF13426 PAS domain CFK40_RS02300 PF00672 HAMP domain CFK40_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS02300 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS02310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFK40_RS02310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFK40_RS02315 PF05547 Immune inhibitor A peptidase M6 CFK40_RS02315 PF00801 PKD domain CFK40_RS02320 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CFK40_RS02320 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CFK40_RS02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS02330 PF01497 Periplasmic binding protein CFK40_RS02335 PF00375 Sodium:dicarboxylate symporter family CFK40_RS02340 PF00571 CBS domain CFK40_RS02345 PF00067 Cytochrome P450 CFK40_RS02350 PF03631 Virulence factor BrkB CFK40_RS02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS02370 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS02370 PF00107 Zinc-binding dehydrogenase CFK40_RS02380 PF00487 Fatty acid desaturase CFK40_RS02385 PF07730 Histidine kinase CFK40_RS02390 PF00072 Response regulator receiver domain CFK40_RS02390 PF00196 Bacterial regulatory proteins, luxR family CFK40_RS02395 PF00296 Luciferase-like monooxygenase CFK40_RS02400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFK40_RS02405 PF03358 NADPH-dependent FMN reductase CFK40_RS02415 PF04055 Radical SAM superfamily CFK40_RS02425 PF03928 Haem-degrading CFK40_RS02430 PF04239 Protein of unknown function (DUF421) CFK40_RS02440 PF00893 Small Multidrug Resistance protein CFK40_RS02445 PF00893 Small Multidrug Resistance protein CFK40_RS02450 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS02450 PF17934 Tetracyclin repressor-like, C-terminal domain CFK40_RS02455 PF06628 Catalase-related immune-responsive CFK40_RS02455 PF00199 Catalase CFK40_RS02455 PF18011 C-terminal domain found in long catalases CFK40_RS02460 PF01235 Sodium:alanine symporter family CFK40_RS02475 PF13649 Methyltransferase domain CFK40_RS02485 PF01168 Alanine racemase, N-terminal domain CFK40_RS02490 PF03553 Na+/H+ antiporter family CFK40_RS02495 PF01594 AI-2E family transporter CFK40_RS02500 PF08245 Mur ligase middle domain CFK40_RS02500 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS02500 PF01225 Mur ligase family, catalytic domain CFK40_RS02505 PF01225 Mur ligase family, catalytic domain CFK40_RS02505 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS02505 PF08245 Mur ligase middle domain CFK40_RS02515 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS02520 PF01520 N-acetylmuramoyl-L-alanine amidase CFK40_RS02525 PF01425 Amidase CFK40_RS02540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFK40_RS02540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFK40_RS02545 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CFK40_RS02545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFK40_RS02560 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS02560 PF01380 SIS domain CFK40_RS02565 PF07690 Major Facilitator Superfamily CFK40_RS02570 PF00176 SNF2 family N-terminal domain CFK40_RS02570 PF00271 Helicase conserved C-terminal domain CFK40_RS02570 PF12419 SNF2 Helicase protein CFK40_RS02580 PF03060 Nitronate monooxygenase CFK40_RS02585 PF00877 NlpC/P60 family CFK40_RS02590 PF00082 Subtilase family CFK40_RS02595 PF01042 Endoribonuclease L-PSP CFK40_RS02600 PF00465 Iron-containing alcohol dehydrogenase CFK40_RS02610 PF07690 Major Facilitator Superfamily CFK40_RS02615 PF06207 Protein of unknown function (DUF1002) CFK40_RS02625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS02635 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS02640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS02640 PF00005 ABC transporter CFK40_RS02645 PF00005 ABC transporter CFK40_RS02645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS02650 PF06725 3D domain CFK40_RS02650 PF01476 LysM domain CFK40_RS02655 PF00155 Aminotransferase class I and II CFK40_RS02660 PF01370 NAD dependent epimerase/dehydratase family CFK40_RS02665 PF12848 ABC transporter CFK40_RS02665 PF00005 ABC transporter CFK40_RS02685 PF13472 GDSL-like Lipase/Acylhydrolase family CFK40_RS02690 PF00892 EamA-like transporter family CFK40_RS02695 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS02705 PF13091 PLD-like domain CFK40_RS02705 PF13396 Phospholipase_D-nuclease N-terminal CFK40_RS02710 PF03061 Thioesterase superfamily CFK40_RS02715 PF01235 Sodium:alanine symporter family CFK40_RS02720 PF00221 Aromatic amino acid lyase CFK40_RS02725 PF17391 Urocanase N-terminal domain CFK40_RS02725 PF17392 Urocanase C-terminal domain CFK40_RS02725 PF01175 Urocanase Rossmann-like domain CFK40_RS02730 PF07969 Amidohydrolase family CFK40_RS02735 PF01638 HxlR-like helix-turn-helix CFK40_RS02740 PF02073 Thermophilic metalloprotease (M29) CFK40_RS02745 PF16124 RecQ zinc-binding CFK40_RS02745 PF00570 HRDC domain CFK40_RS02745 PF00270 DEAD/DEAH box helicase CFK40_RS02745 PF00271 Helicase conserved C-terminal domain CFK40_RS02745 PF09382 RQC domain CFK40_RS02750 PF05525 Branched-chain amino acid transport protein CFK40_RS02770 PF01594 AI-2E family transporter CFK40_RS02775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFK40_RS02775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFK40_RS02775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFK40_RS02775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFK40_RS02780 PF04343 Protein of unknown function, DUF488 CFK40_RS02790 PF02566 OsmC-like protein CFK40_RS02795 PF01613 Flavin reductase like domain CFK40_RS02800 PF00375 Sodium:dicarboxylate symporter family CFK40_RS02805 PF01757 Acyltransferase family CFK40_RS02815 PF07670 Nucleoside recognition CFK40_RS02820 PF05547 Immune inhibitor A peptidase M6 CFK40_RS02825 PF03109 ABC1 family CFK40_RS02835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CFK40_RS02835 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CFK40_RS02835 PF00034 Cytochrome c CFK40_RS02840 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFK40_RS02845 PF00510 Cytochrome c oxidase subunit III CFK40_RS02850 PF01645 Conserved region in glutamate synthase CFK40_RS02860 PF04241 Protein of unknown function (DUF423) CFK40_RS02870 PF09671 Spore coat protein (Spore_GerQ) CFK40_RS02905 PF06778 Chlorite dismutase CFK40_RS02910 PF01515 Phosphate acetyl/butaryl transferase CFK40_RS02915 PF03099 Biotin/lipoate A/B protein ligase family CFK40_RS02920 PF01966 HD domain CFK40_RS02930 PF08741 YwhD family CFK40_RS02935 PF00912 Transglycosylase CFK40_RS02935 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS02940 PF17284 Spermidine synthase tetramerisation domain CFK40_RS02945 PF00491 Arginase family CFK40_RS02955 PF00750 tRNA synthetases class I (R) CFK40_RS02955 PF05746 DALR anticodon binding domain CFK40_RS02955 PF03485 Arginyl tRNA synthetase N terminal domain CFK40_RS02965 PF13183 4Fe-4S dicluster domain CFK40_RS02965 PF02754 Cysteine-rich domain CFK40_RS02970 PF00108 Thiolase, N-terminal domain CFK40_RS02970 PF02803 Thiolase, C-terminal domain CFK40_RS02975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFK40_RS02975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFK40_RS02980 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS02980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS02980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS02985 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS02985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS02985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS03000 PF02310 B12 binding domain CFK40_RS03000 PF01642 Methylmalonyl-CoA mutase CFK40_RS03005 PF05066 HB1, ASXL, restriction endonuclease HTH domain CFK40_RS03010 PF06418 CTP synthase N-terminus CFK40_RS03010 PF00117 Glutamine amidotransferase class-I CFK40_RS03015 PF00072 Response regulator receiver domain CFK40_RS03020 PF01116 Fructose-bisphosphate aldolase class-II CFK40_RS03025 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFK40_RS03030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFK40_RS03035 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CFK40_RS03040 PF07497 Rho termination factor, RNA-binding domain CFK40_RS03040 PF07498 Rho termination factor, N-terminal domain CFK40_RS03040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFK40_RS03045 PF01197 Ribosomal protein L31 CFK40_RS03050 PF00265 Thymidine kinase CFK40_RS03055 PF01645 Conserved region in glutamate synthase CFK40_RS03060 PF00472 RF-1 domain CFK40_RS03060 PF03462 PCRF domain CFK40_RS03065 PF05175 Methyltransferase small domain CFK40_RS03065 PF17827 PrmC N-terminal domain CFK40_RS03070 PF09551 Stage II sporulation protein R (spore_II_R) CFK40_RS03080 PF03481 Putative GTP-binding controlling metal-binding CFK40_RS03080 PF01300 Telomere recombination CFK40_RS03090 PF00664 ABC transporter transmembrane region CFK40_RS03090 PF00005 ABC transporter CFK40_RS03095 PF00005 ABC transporter CFK40_RS03095 PF00664 ABC transporter transmembrane region CFK40_RS03100 PF02659 Putative manganese efflux pump CFK40_RS03105 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFK40_RS03110 PF02502 Ribose/Galactose Isomerase CFK40_RS03115 PF04260 Protein of unknown function (DUF436) CFK40_RS03120 PF00464 Serine hydroxymethyltransferase CFK40_RS03130 PF02350 UDP-N-acetylglucosamine 2-epimerase CFK40_RS03135 PF02225 PA domain CFK40_RS03135 PF05922 Peptidase inhibitor I9 CFK40_RS03135 PF00082 Subtilase family CFK40_RS03135 PF13860 FlgD Ig-like domain CFK40_RS03140 PF03899 ATP synthase I chain CFK40_RS03145 PF00119 ATP synthase A chain CFK40_RS03150 PF00137 ATP synthase subunit C CFK40_RS03155 PF00430 ATP synthase B/B' CF(0) CFK40_RS03160 PF00213 ATP synthase delta (OSCP) subunit CFK40_RS03165 PF00306 ATP synthase alpha/beta chain, C terminal domain CFK40_RS03165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFK40_RS03165 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFK40_RS03170 PF00231 ATP synthase CFK40_RS03175 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFK40_RS03175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFK40_RS03180 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CFK40_RS03180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CFK40_RS03185 PF06612 Protein of unknown function (DUF1146) CFK40_RS03195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFK40_RS03200 PF17676 LD-carboxypeptidase C-terminal domain CFK40_RS03200 PF02016 LD-carboxypeptidase N-terminal domain CFK40_RS03205 PF13378 Enolase C-terminal domain-like CFK40_RS03205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFK40_RS03210 PF00877 NlpC/P60 family CFK40_RS03215 PF08486 Stage II sporulation protein CFK40_RS03220 PF01551 Peptidase family M23 CFK40_RS03230 PF12116 Stage III sporulation protein D CFK40_RS03240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFK40_RS03240 PF00460 Flagella basal body rod protein CFK40_RS03245 PF00460 Flagella basal body rod protein CFK40_RS03245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFK40_RS03255 PF07977 FabA-like domain CFK40_RS03275 PF00741 Gas vesicle protein CFK40_RS03280 PF05121 Gas vesicle protein K CFK40_RS03280 PF00741 Gas vesicle protein CFK40_RS03285 PF00741 Gas vesicle protein CFK40_RS03305 PF07728 AAA domain (dynein-related subfamily) CFK40_RS03315 PF00741 Gas vesicle protein CFK40_RS03335 PF00873 AcrB/AcrD/AcrF family CFK40_RS03360 PF00953 Glycosyl transferase family 4 CFK40_RS03375 PF13520 Amino acid permease CFK40_RS03380 PF00953 Glycosyl transferase family 4 CFK40_RS03400 PF14667 Polysaccharide biosynthesis C-terminal domain CFK40_RS03400 PF01943 Polysaccharide biosynthesis protein CFK40_RS03405 PF03808 Glycosyl transferase WecB/TagA/CpsF family CFK40_RS03410 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CFK40_RS03415 PF00746 LPXTG cell wall anchor motif CFK40_RS03415 PF00082 Subtilase family CFK40_RS03415 PF06280 Fn3-like domain CFK40_RS03415 PF02225 PA domain CFK40_RS03420 PF01467 Cytidylyltransferase-like CFK40_RS03425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CFK40_RS03425 PF05036 Sporulation related domain CFK40_RS03425 PF08239 Bacterial SH3 domain CFK40_RS03430 PF09318 Glycosyl transferase 1 domain A CFK40_RS03430 PF00534 Glycosyl transferases group 1 CFK40_RS03435 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CFK40_RS03440 PF01061 ABC-2 type transporter CFK40_RS03445 PF00005 ABC transporter CFK40_RS03450 PF01510 N-acetylmuramoyl-L-alanine amidase CFK40_RS03450 PF13457 GW (Gly-Tryp) dipeptide domain CFK40_RS03455 PF03009 Glycerophosphoryl diester phosphodiesterase family CFK40_RS03460 PF03023 Lipid II flippase MurJ CFK40_RS03470 PF13439 Glycosyltransferase Family 4 CFK40_RS03470 PF00534 Glycosyl transferases group 1 CFK40_RS03475 PF00953 Glycosyl transferase family 4 CFK40_RS03480 PF03816 Cell envelope-related transcriptional attenuator domain CFK40_RS03485 PF03009 Glycerophosphoryl diester phosphodiesterase family CFK40_RS03490 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CFK40_RS03495 PF07729 FCD domain CFK40_RS03495 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS03505 PF01266 FAD dependent oxidoreductase CFK40_RS03510 PF01037 Lrp/AsnC ligand binding domain CFK40_RS03510 PF13404 AsnC-type helix-turn-helix domain CFK40_RS03525 PF02417 Chromate transporter CFK40_RS03530 PF02417 Chromate transporter CFK40_RS03550 PF08125 Mannitol dehydrogenase C-terminal domain CFK40_RS03550 PF01232 Mannitol dehydrogenase Rossmann domain CFK40_RS03575 PF01546 Peptidase family M20/M25/M40 CFK40_RS03575 PF07687 Peptidase dimerisation domain CFK40_RS03580 PF01546 Peptidase family M20/M25/M40 CFK40_RS03580 PF07687 Peptidase dimerisation domain CFK40_RS03585 PF03806 AbgT putative transporter family CFK40_RS03590 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFK40_RS03590 PF00480 ROK family CFK40_RS03595 PF01263 Aldose 1-epimerase CFK40_RS03600 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CFK40_RS03600 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CFK40_RS03605 PF16363 GDP-mannose 4,6 dehydratase CFK40_RS03610 PF10509 Galactokinase galactose-binding signature CFK40_RS03610 PF08544 GHMP kinases C terminal CFK40_RS03610 PF00288 GHMP kinases N terminal domain CFK40_RS03625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS03625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS03630 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFK40_RS03630 PF00480 ROK family CFK40_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS03645 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS03650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS03650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS03655 PF01301 Glycosyl hydrolases family 35 CFK40_RS03660 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS03665 PF11975 Family 4 glycosyl hydrolase C-terminal domain CFK40_RS03665 PF02056 Family 4 glycosyl hydrolase CFK40_RS03670 PF00480 ROK family CFK40_RS03680 PF04854 Protein of unknown function, DUF624 CFK40_RS03685 PF12833 Helix-turn-helix domain CFK40_RS03685 PF02311 AraC-like ligand binding domain CFK40_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS03695 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS03710 PF03932 CutC family CFK40_RS03715 PF07748 Glycosyl hydrolases family 38 C-terminal domain CFK40_RS03715 PF01074 Glycosyl hydrolases family 38 N-terminal domain CFK40_RS03715 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 CFK40_RS03715 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain CFK40_RS03715 PF09261 Alpha mannosidase middle domain CFK40_RS03735 PF00728 Glycosyl hydrolase family 20, catalytic domain CFK40_RS03735 PF07691 PA14 domain CFK40_RS03735 PF02838 Glycosyl hydrolase family 20, domain 2 CFK40_RS03745 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS03750 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFK40_RS03750 PF00480 ROK family CFK40_RS03755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS03765 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS03770 PF00005 ABC transporter CFK40_RS03770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS03775 PF00005 ABC transporter CFK40_RS03775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS03800 PF05025 RbsD / FucU transport protein family CFK40_RS03805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFK40_RS03805 PF13378 Enolase C-terminal domain-like CFK40_RS03810 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFK40_RS03820 PF00106 short chain dehydrogenase CFK40_RS03840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS03840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS03850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS03850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS03865 PF16353 Domain of unknown function(DUF4981) CFK40_RS03865 PF02929 Beta galactosidase small chain CFK40_RS03865 PF00703 Glycosyl hydrolases family 2 CFK40_RS03865 PF02837 Glycosyl hydrolases family 2, sugar binding domain CFK40_RS03865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CFK40_RS03880 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS03880 PF07702 UTRA domain CFK40_RS03885 PF01380 SIS domain CFK40_RS03890 PF01979 Amidohydrolase family CFK40_RS03895 PF00294 pfkB family carbohydrate kinase CFK40_RS03900 PF01791 DeoC/LacD family aldolase CFK40_RS03915 PF01979 Amidohydrolase family CFK40_RS03920 PF01565 FAD binding domain CFK40_RS03920 PF08031 Berberine and berberine like CFK40_RS03940 PF04740 LXG domain of WXG superfamily CFK40_RS03945 PF04634 Protein of unknown function, DUF600 CFK40_RS03960 PF00877 NlpC/P60 family CFK40_RS03960 PF01476 LysM domain CFK40_RS03965 PF13807 G-rich domain on putative tyrosine kinase CFK40_RS03965 PF02706 Chain length determinant protein CFK40_RS03970 PF13614 AAA domain CFK40_RS03980 PF00072 Response regulator receiver domain CFK40_RS03980 PF00196 Bacterial regulatory proteins, luxR family CFK40_RS03985 PF02719 Polysaccharide biosynthesis protein CFK40_RS03995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFK40_RS03995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFK40_RS03995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFK40_RS04000 PF13439 Glycosyltransferase Family 4 CFK40_RS04000 PF00534 Glycosyl transferases group 1 CFK40_RS04025 PF02397 Bacterial sugar transferase CFK40_RS04030 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS04030 PF17836 PglD N-terminal domain CFK40_RS04035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFK40_RS04040 PF03816 Cell envelope-related transcriptional attenuator domain CFK40_RS04045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS04050 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04055 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04060 PF00005 ABC transporter CFK40_RS04060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS04065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS04065 PF00005 ABC transporter CFK40_RS04075 PF01546 Peptidase family M20/M25/M40 CFK40_RS04075 PF07687 Peptidase dimerisation domain CFK40_RS04130 PF00294 pfkB family carbohydrate kinase CFK40_RS04135 PF07702 UTRA domain CFK40_RS04135 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS04150 PF02361 Cobalt transport protein CFK40_RS04155 PF00005 ABC transporter CFK40_RS04160 PF00005 ABC transporter CFK40_RS04175 PF00294 pfkB family carbohydrate kinase CFK40_RS04185 PF05853 beta-keto acid cleavage enzyme CFK40_RS04190 PF04199 Putative cyclase CFK40_RS04195 PF00474 Sodium:solute symporter family CFK40_RS04210 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS04210 PF07729 FCD domain CFK40_RS04220 PF00795 Carbon-nitrogen hydrolase CFK40_RS04225 PF03480 Bacterial extracellular solute-binding protein, family 7 CFK40_RS04235 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFK40_RS04235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFK40_RS04240 PF07286 Protein of unknown function (DUF1445) CFK40_RS04250 PF00158 Sigma-54 interaction domain CFK40_RS04255 PF07690 Major Facilitator Superfamily CFK40_RS04260 PF00491 Arginase family CFK40_RS04265 PF06733 DEAD_2 CFK40_RS04265 PF13307 Helicase C-terminal domain CFK40_RS04270 PF00375 Sodium:dicarboxylate symporter family CFK40_RS04275 PF06314 Acetoacetate decarboxylase (ADC) CFK40_RS04280 PF00474 Sodium:solute symporter family CFK40_RS04285 PF06314 Acetoacetate decarboxylase (ADC) CFK40_RS04300 PF00480 ROK family CFK40_RS04305 PF01261 Xylose isomerase-like TIM barrel CFK40_RS04310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFK40_RS04310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFK40_RS04315 PF00155 Aminotransferase class I and II CFK40_RS04320 PF03553 Na+/H+ antiporter family CFK40_RS04325 PF00501 AMP-binding enzyme CFK40_RS04325 PF14535 AMP-binding enzyme C-terminal domain CFK40_RS04335 PF02515 CoA-transferase family III CFK40_RS04340 PF13520 Amino acid permease CFK40_RS04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS04345 PF03466 LysR substrate binding domain CFK40_RS04350 PF08279 HTH domain CFK40_RS04350 PF05043 Mga helix-turn-helix domain CFK40_RS04350 PF00874 PRD domain CFK40_RS04350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04355 PF02378 Phosphotransferase system, EIIC CFK40_RS04355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS04360 PF08279 HTH domain CFK40_RS04360 PF05043 Mga helix-turn-helix domain CFK40_RS04360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04360 PF00874 PRD domain CFK40_RS04365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS04365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS04380 PF00155 Aminotransferase class I and II CFK40_RS04385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS04395 PF03611 PTS system sugar-specific permease component CFK40_RS04400 PF00456 Transketolase, thiamine diphosphate binding domain CFK40_RS04400 PF02780 Transketolase, C-terminal domain CFK40_RS04400 PF02779 Transketolase, pyrimidine binding domain CFK40_RS04410 PF00456 Transketolase, thiamine diphosphate binding domain CFK40_RS04410 PF02779 Transketolase, pyrimidine binding domain CFK40_RS04410 PF02780 Transketolase, C-terminal domain CFK40_RS04425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04430 PF08279 HTH domain CFK40_RS04430 PF05043 Mga helix-turn-helix domain CFK40_RS04430 PF00874 PRD domain CFK40_RS04435 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS04435 PF01380 SIS domain CFK40_RS04440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS04440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04440 PF02378 Phosphotransferase system, EIIC CFK40_RS04445 PF09261 Alpha mannosidase middle domain CFK40_RS04445 PF07748 Glycosyl hydrolases family 38 C-terminal domain CFK40_RS04445 PF01074 Glycosyl hydrolases family 38 N-terminal domain CFK40_RS04450 PF02595 Glycerate kinase family CFK40_RS04455 PF01238 Phosphomannose isomerase type I CFK40_RS04470 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04475 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04495 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CFK40_RS04500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS04505 PF02378 Phosphotransferase system, EIIC CFK40_RS04510 PF00248 Aldo/keto reductase family CFK40_RS04520 PF02308 MgtC family CFK40_RS04525 PF00149 Calcineurin-like phosphoesterase CFK40_RS04535 PF02811 PHP domain CFK40_RS04550 PF00171 Aldehyde dehydrogenase family CFK40_RS04555 PF04962 KduI/IolB family CFK40_RS04560 PF00294 pfkB family carbohydrate kinase CFK40_RS04565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS04565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS04565 PF00205 Thiamine pyrophosphate enzyme, central domain CFK40_RS04575 PF00005 ABC transporter CFK40_RS04575 PF00664 ABC transporter transmembrane region CFK40_RS04580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_RS04580 PF01411 tRNA synthetases class II (A) CFK40_RS04580 PF02272 DHHA1 domain CFK40_RS04585 PF07568 Histidine kinase CFK40_RS04585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS04585 PF12282 Signal transduction histidine kinase CFK40_RS04590 PF00072 Response regulator receiver domain CFK40_RS04590 PF03861 ANTAR domain CFK40_RS04595 PF04346 Ethanolamine utilisation protein, EutH CFK40_RS04600 PF00936 BMC domain CFK40_RS04610 PF06277 Ethanolamine utilisation protein EutA CFK40_RS04615 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CFK40_RS04620 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CFK40_RS04625 PF00936 BMC domain CFK40_RS04630 PF00465 Iron-containing alcohol dehydrogenase CFK40_RS04630 PF00171 Aldehyde dehydrogenase family CFK40_RS04635 PF00936 BMC domain CFK40_RS04640 PF06130 Phosphate propanoyltransferase CFK40_RS04650 PF03319 Ethanolamine utilisation protein EutN/carboxysome CFK40_RS04655 PF00936 BMC domain CFK40_RS04660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CFK40_RS04660 PF00056 lactate/malate dehydrogenase, NAD binding domain CFK40_RS04665 PF07690 Major Facilitator Superfamily CFK40_RS04670 PF07729 FCD domain CFK40_RS04670 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS04675 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFK40_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04690 PF00005 ABC transporter CFK40_RS04695 PF06725 3D domain CFK40_RS04700 PF01546 Peptidase family M20/M25/M40 CFK40_RS04700 PF07687 Peptidase dimerisation domain CFK40_RS04705 PF07969 Amidohydrolase family CFK40_RS04725 PF01979 Amidohydrolase family CFK40_RS04740 PF00480 ROK family CFK40_RS04740 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFK40_RS04750 PF08402 TOBE domain CFK40_RS04750 PF00005 ABC transporter CFK40_RS04755 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04760 PF14698 Argininosuccinate lyase C-terminal CFK40_RS04760 PF00206 Lyase CFK40_RS04770 PF04198 Putative sugar-binding domain CFK40_RS04775 PF00581 Rhodanese-like domain CFK40_RS04780 PF00107 Zinc-binding dehydrogenase CFK40_RS04780 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS04785 PF01266 FAD dependent oxidoreductase CFK40_RS04785 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CFK40_RS04790 PF04198 Putative sugar-binding domain CFK40_RS04800 PF03608 PTS system enzyme II sorbitol-specific factor CFK40_RS04805 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CFK40_RS04805 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CFK40_RS04820 PF00676 Dehydrogenase E1 component CFK40_RS04825 PF02779 Transketolase, pyrimidine binding domain CFK40_RS04825 PF02780 Transketolase, C-terminal domain CFK40_RS04830 PF00364 Biotin-requiring enzyme CFK40_RS04830 PF02817 e3 binding domain CFK40_RS04830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFK40_RS04835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFK40_RS04835 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS04840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS04845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS04850 PF03611 PTS system sugar-specific permease component CFK40_RS04855 PF00474 Sodium:solute symporter family CFK40_RS04860 PF07729 FCD domain CFK40_RS04860 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS04865 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS04880 PF01970 Tripartite tricarboxylate transporter TctA family CFK40_RS04890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CFK40_RS04905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS04915 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS04920 PF00005 ABC transporter CFK40_RS04920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS04925 PF00005 ABC transporter CFK40_RS04925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS04930 PF03466 LysR substrate binding domain CFK40_RS04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS04935 PF01968 Hydantoinase/oxoprolinase CFK40_RS04935 PF05378 Hydantoinase/oxoprolinase N-terminal region CFK40_RS04945 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CFK40_RS04960 PF00158 Sigma-54 interaction domain CFK40_RS04960 PF13426 PAS domain CFK40_RS04960 PF02954 Bacterial regulatory protein, Fis family CFK40_RS04965 PF03812 2-keto-3-deoxygluconate permease CFK40_RS04970 PF17042 Nucleotide-binding C-terminal domain CFK40_RS04970 PF07005 Sugar-binding N-terminal domain CFK40_RS04975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CFK40_RS04980 PF00474 Sodium:solute symporter family CFK40_RS04985 PF00892 EamA-like transporter family CFK40_RS04990 PF00355 Rieske [2Fe-2S] domain CFK40_RS04990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CFK40_RS04995 PF00324 Amino acid permease CFK40_RS05000 PF03167 Uracil DNA glycosylase superfamily CFK40_RS05005 PF11181 Heat induced stress protein YflT CFK40_RS05015 PF01546 Peptidase family M20/M25/M40 CFK40_RS05015 PF07687 Peptidase dimerisation domain CFK40_RS05025 PF03606 C4-dicarboxylate anaerobic carrier CFK40_RS05035 PF00474 Sodium:solute symporter family CFK40_RS05040 PF02423 Ornithine cyclodeaminase/mu-crystallin family CFK40_RS05045 PF16350 FAD dependent oxidoreductase central domain CFK40_RS05045 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFK40_RS05045 PF01571 Aminomethyltransferase folate-binding domain CFK40_RS05045 PF01266 FAD dependent oxidoreductase CFK40_RS05050 PF17853 GGDEF-like domain CFK40_RS05050 PF13556 PucR C-terminal helix-turn-helix domain CFK40_RS05050 PF05651 Putative sugar diacid recognition CFK40_RS05060 PF00535 Glycosyl transferase family 2 CFK40_RS05065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFK40_RS05070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFK40_RS05070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFK40_RS05070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFK40_RS05095 PF16363 GDP-mannose 4,6 dehydratase CFK40_RS05105 PF02350 UDP-N-acetylglucosamine 2-epimerase CFK40_RS05115 PF12464 Maltose acetyltransferase CFK40_RS05115 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS05125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS05125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS05140 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS05145 PF01380 SIS domain CFK40_RS05145 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS05150 PF01081 KDPG and KHG aldolase CFK40_RS05155 PF03480 Bacterial extracellular solute-binding protein, family 7 CFK40_RS05165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFK40_RS05170 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CFK40_RS05175 PF00294 pfkB family carbohydrate kinase CFK40_RS05180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFK40_RS05190 PF03606 C4-dicarboxylate anaerobic carrier CFK40_RS05195 PF02838 Glycosyl hydrolase family 20, domain 2 CFK40_RS05195 PF07555 beta-N-acetylglucosaminidase CFK40_RS05195 PF00041 Fibronectin type III domain CFK40_RS05195 PF00754 F5/8 type C domain CFK40_RS05195 PF00963 Cohesin domain CFK40_RS05200 PF07969 Amidohydrolase family CFK40_RS05205 PF00474 Sodium:solute symporter family CFK40_RS05215 PF01546 Peptidase family M20/M25/M40 CFK40_RS05215 PF07687 Peptidase dimerisation domain CFK40_RS05220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFK40_RS05220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS05225 PF01180 Dihydroorotate dehydrogenase CFK40_RS05230 PF01979 Amidohydrolase family CFK40_RS05240 PF12867 DinB superfamily CFK40_RS05245 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS05250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CFK40_RS05260 PF00202 Aminotransferase class-III CFK40_RS05265 PF00171 Aldehyde dehydrogenase family CFK40_RS05275 PF00474 Sodium:solute symporter family CFK40_RS05280 PF07687 Peptidase dimerisation domain CFK40_RS05280 PF01546 Peptidase family M20/M25/M40 CFK40_RS05285 PF00180 Isocitrate/isopropylmalate dehydrogenase CFK40_RS05295 PF02652 L-lactate permease CFK40_RS05300 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS05300 PF07729 FCD domain CFK40_RS05305 PF02754 Cysteine-rich domain CFK40_RS05310 PF11870 Domain of unknown function (DUF3390) CFK40_RS05310 PF13183 4Fe-4S dicluster domain CFK40_RS05310 PF02589 LUD domain CFK40_RS05315 PF02589 LUD domain CFK40_RS05320 PF03466 LysR substrate binding domain CFK40_RS05320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS05325 PF01274 Malate synthase CFK40_RS05330 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS05330 PF07729 FCD domain CFK40_RS05335 PF02913 FAD linked oxidases, C-terminal domain CFK40_RS05335 PF01565 FAD binding domain CFK40_RS05340 PF13183 4Fe-4S dicluster domain CFK40_RS05340 PF02754 Cysteine-rich domain CFK40_RS05345 PF02913 FAD linked oxidases, C-terminal domain CFK40_RS05345 PF01565 FAD binding domain CFK40_RS05350 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFK40_RS05355 PF02652 L-lactate permease CFK40_RS05360 PF13456 Reverse transcriptase-like CFK40_RS05365 PF01435 Peptidase family M48 CFK40_RS05370 PF06463 Molybdenum Cofactor Synthesis C CFK40_RS05370 PF04055 Radical SAM superfamily CFK40_RS05375 PF02634 FdhD/NarQ family CFK40_RS05385 PF00171 Aldehyde dehydrogenase family CFK40_RS05390 PF01472 PUA domain CFK40_RS05390 PF00696 Amino acid kinase family CFK40_RS05395 PF07687 Peptidase dimerisation domain CFK40_RS05395 PF01546 Peptidase family M20/M25/M40 CFK40_RS05410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CFK40_RS05410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CFK40_RS05415 PF00583 Acetyltransferase (GNAT) family CFK40_RS05420 PF00202 Aminotransferase class-III CFK40_RS05425 PF06339 Ectoine synthase CFK40_RS05430 PF01520 N-acetylmuramoyl-L-alanine amidase CFK40_RS05430 PF05036 Sporulation related domain CFK40_RS05440 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS05445 PF00005 ABC transporter CFK40_RS05450 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS05460 PF03466 LysR substrate binding domain CFK40_RS05465 PF00491 Arginase family CFK40_RS05470 PF03616 Sodium/glutamate symporter CFK40_RS05475 PF00474 Sodium:solute symporter family CFK40_RS05485 PF00694 Aconitase C-terminal domain CFK40_RS05490 PF00330 Aconitase family (aconitate hydratase) CFK40_RS05495 PF00682 HMGL-like CFK40_RS05500 PF02515 CoA-transferase family III CFK40_RS05505 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS05505 PF07729 FCD domain CFK40_RS05530 PF06508 Queuosine biosynthesis protein QueC CFK40_RS05535 PF01242 6-pyruvoyl tetrahydropterin synthase CFK40_RS05540 PF04055 Radical SAM superfamily CFK40_RS05555 PF17853 GGDEF-like domain CFK40_RS05555 PF06018 CodY GAF-like domain CFK40_RS05555 PF13556 PucR C-terminal helix-turn-helix domain CFK40_RS05560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFK40_RS05560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFK40_RS05565 PF03606 C4-dicarboxylate anaerobic carrier CFK40_RS05570 PF01546 Peptidase family M20/M25/M40 CFK40_RS05570 PF07687 Peptidase dimerisation domain CFK40_RS05575 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS05580 PF02261 Aspartate decarboxylase CFK40_RS05590 PF00474 Sodium:solute symporter family CFK40_RS05595 PF04341 Protein of unknown function, DUF485 CFK40_RS05600 PF04397 LytTr DNA-binding domain CFK40_RS05600 PF00072 Response regulator receiver domain CFK40_RS05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS05605 PF07694 5TMR of 5TMR-LYT CFK40_RS05605 PF06580 Histidine kinase CFK40_RS05610 PF00474 Sodium:solute symporter family CFK40_RS05620 PF07690 Major Facilitator Superfamily CFK40_RS05635 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS05635 PF01380 SIS domain CFK40_RS05640 PF00294 pfkB family carbohydrate kinase CFK40_RS05645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS05645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS05650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS05650 PF02378 Phosphotransferase system, EIIC CFK40_RS05650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS05655 PF01116 Fructose-bisphosphate aldolase class-II CFK40_RS05665 PF00144 Beta-lactamase CFK40_RS05680 PF10941 Protein of unknown function DUF2620 CFK40_RS05685 PF10797 Protein of unknown function CFK40_RS05690 PF02126 Phosphotriesterase family CFK40_RS05695 PF00155 Aminotransferase class I and II CFK40_RS05700 PF01168 Alanine racemase, N-terminal domain CFK40_RS05705 PF01676 Metalloenzyme superfamily CFK40_RS05710 PF00269 Small, acid-soluble spore proteins, alpha/beta type CFK40_RS05715 PF01619 Proline dehydrogenase CFK40_RS05720 PF00557 Metallopeptidase family M24 CFK40_RS05720 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS05725 PF05544 Proline racemase CFK40_RS05730 PF02423 Ornithine cyclodeaminase/mu-crystallin family CFK40_RS05735 PF07969 Amidohydrolase family CFK40_RS05740 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS05740 PF00557 Metallopeptidase family M24 CFK40_RS05745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS05750 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS05755 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS05760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS05760 PF00005 ABC transporter CFK40_RS05770 PF00557 Metallopeptidase family M24 CFK40_RS05770 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS05775 PF00326 Prolyl oligopeptidase family CFK40_RS05775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CFK40_RS05780 PF04324 BFD-like [2Fe-2S] binding domain CFK40_RS05780 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS05795 PF00158 Sigma-54 interaction domain CFK40_RS05795 PF02954 Bacterial regulatory protein, Fis family CFK40_RS05795 PF00989 PAS fold CFK40_RS05800 PF01266 FAD dependent oxidoreductase CFK40_RS05805 PF05544 Proline racemase CFK40_RS05810 PF05544 Proline racemase CFK40_RS05815 PF03553 Na+/H+ antiporter family CFK40_RS05820 PF00701 Dihydrodipicolinate synthetase family CFK40_RS05825 PF00171 Aldehyde dehydrogenase family CFK40_RS05840 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CFK40_RS05850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS05855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS05860 PF03611 PTS system sugar-specific permease component CFK40_RS05865 PF00107 Zinc-binding dehydrogenase CFK40_RS05865 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS05870 PF01791 DeoC/LacD family aldolase CFK40_RS05875 PF00107 Zinc-binding dehydrogenase CFK40_RS05875 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS05880 PF07840 FadR C-terminal domain CFK40_RS05880 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS05885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFK40_RS05885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFK40_RS05890 PF00202 Aminotransferase class-III CFK40_RS05895 PF03466 LysR substrate binding domain CFK40_RS05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS05900 PF00205 Thiamine pyrophosphate enzyme, central domain CFK40_RS05900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS05900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS05925 PF00180 Isocitrate/isopropylmalate dehydrogenase CFK40_RS05935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS05940 PF07722 Peptidase C26 CFK40_RS05945 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CFK40_RS05945 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CFK40_RS05950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS05950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS05950 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS05955 PF01618 MotA/TolQ/ExbB proton channel family CFK40_RS05970 PF05343 M42 glutamyl aminopeptidase CFK40_RS05975 PF00733 Asparagine synthase CFK40_RS05975 PF13537 Glutamine amidotransferase domain CFK40_RS05985 PF13460 NAD(P)H-binding CFK40_RS05990 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS06000 PF01547 Bacterial extracellular solute-binding protein CFK40_RS06005 PF01547 Bacterial extracellular solute-binding protein CFK40_RS06010 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS06015 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS06020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS06020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS06025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS06025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS06040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS06040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS06045 PF01261 Xylose isomerase-like TIM barrel CFK40_RS06050 PF02829 3H domain CFK40_RS06050 PF08279 HTH domain CFK40_RS06055 PF00266 Aminotransferase class-V CFK40_RS06060 PF00890 FAD binding domain CFK40_RS06060 PF02910 Fumarate reductase flavoprotein C-term CFK40_RS06065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CFK40_RS06065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CFK40_RS06070 PF02445 Quinolinate synthetase A protein CFK40_RS06080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFK40_RS06085 PF00892 EamA-like transporter family CFK40_RS06095 PF00535 Glycosyl transferase family 2 CFK40_RS06100 PF16363 GDP-mannose 4,6 dehydratase CFK40_RS06105 PF00483 Nucleotidyl transferase CFK40_RS06115 PF14489 QueF-like protein CFK40_RS06130 PF00005 ABC transporter CFK40_RS06135 PF00230 Major intrinsic protein CFK40_RS06140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFK40_RS06140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFK40_RS06155 PF00155 Aminotransferase class I and II CFK40_RS06160 PF09962 Uncharacterized conserved protein (DUF2196) CFK40_RS06180 PF02245 Methylpurine-DNA glycosylase (MPG) CFK40_RS06185 PF00005 ABC transporter CFK40_RS06190 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS06195 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFK40_RS06200 PF13509 S1 domain CFK40_RS06200 PF17783 CvfB-like winged helix domain CFK40_RS06210 PF12800 4Fe-4S binding domain CFK40_RS06210 PF00037 4Fe-4S binding domain CFK40_RS06220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS06220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFK40_RS06225 PF03553 Na+/H+ antiporter family CFK40_RS06235 PF00106 short chain dehydrogenase CFK40_RS06240 PF02535 ZIP Zinc transporter CFK40_RS06245 PF02659 Putative manganese efflux pump CFK40_RS06250 PF02082 Transcriptional regulator CFK40_RS06255 PF00042 Globin CFK40_RS06255 PF00970 Oxidoreductase FAD-binding domain CFK40_RS06255 PF00175 Oxidoreductase NAD-binding domain CFK40_RS06260 PF03788 LrgA family CFK40_RS06265 PF04172 LrgB-like family CFK40_RS06270 PF01131 DNA topoisomerase CFK40_RS06270 PF01751 Toprim domain CFK40_RS06275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CFK40_RS06275 PF17203 Single cache domain 3 CFK40_RS06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS06275 PF00989 PAS fold CFK40_RS06280 PF12431 Transcriptional regulator CFK40_RS06280 PF08279 HTH domain CFK40_RS06280 PF00072 Response regulator receiver domain CFK40_RS06295 PF01970 Tripartite tricarboxylate transporter TctA family CFK40_RS06305 PF03972 MmgE/PrpD family CFK40_RS06320 PF02254 TrkA-N domain CFK40_RS06320 PF07885 Ion channel CFK40_RS06340 PF07969 Amidohydrolase family CFK40_RS06345 PF02903 Alpha amylase, N-terminal ig-like domain CFK40_RS06345 PF16657 Maltogenic Amylase, C-terminal domain CFK40_RS06345 PF00128 Alpha amylase, catalytic domain CFK40_RS06355 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS06360 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS06365 PF01055 Glycosyl hydrolases family 31 CFK40_RS06365 PF17137 Domain of unknown function (DUF5110) CFK40_RS06365 PF13802 Galactose mutarotase-like CFK40_RS06365 PF16338 Domain of unknown function (DUF4968) CFK40_RS06370 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS06370 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CFK40_RS06375 PF00258 Flavodoxin CFK40_RS06380 PF00892 EamA-like transporter family CFK40_RS06385 PF02667 Short chain fatty acid transporter CFK40_RS06390 PF01869 BadF/BadG/BcrA/BcrD ATPase family CFK40_RS06395 PF01380 SIS domain CFK40_RS06395 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS06400 PF01380 SIS domain CFK40_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS06415 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS06420 PF07075 Protein of unknown function (DUF1343) CFK40_RS06425 PF00933 Glycosyl hydrolase family 3 N terminal domain CFK40_RS06425 PF01915 Glycosyl hydrolase family 3 C-terminal domain CFK40_RS06430 PF00144 Beta-lactamase CFK40_RS06450 PF02599 Global regulator protein family CFK40_RS06455 PF00700 Bacterial flagellin C-terminal helical region CFK40_RS06455 PF00669 Bacterial flagellin N-terminal helical region CFK40_RS06460 PF00700 Bacterial flagellin C-terminal helical region CFK40_RS06460 PF00669 Bacterial flagellin N-terminal helical region CFK40_RS06470 PF01497 Periplasmic binding protein CFK40_RS06475 PF01032 FecCD transport family CFK40_RS06480 PF00005 ABC transporter CFK40_RS06485 PF03186 CobD/Cbib protein CFK40_RS06490 PF00155 Aminotransferase class I and II CFK40_RS06495 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CFK40_RS06500 PF07685 CobB/CobQ-like glutamine amidotransferase domain CFK40_RS06505 PF02654 Cobalamin-5-phosphate synthase CFK40_RS06510 PF00300 Histidine phosphatase superfamily (branch 1) CFK40_RS06520 PF01923 Cobalamin adenosyltransferase CFK40_RS06540 PF00474 Sodium:solute symporter family CFK40_RS06545 PF00491 Arginase family CFK40_RS06550 PF01177 Asp/Glu/Hydantoin racemase CFK40_RS06555 PF07690 Major Facilitator Superfamily CFK40_RS06560 PF07690 Major Facilitator Superfamily CFK40_RS06565 PF00939 Sodium:sulfate symporter transmembrane region CFK40_RS06570 PF07690 Major Facilitator Superfamily CFK40_RS06585 PF00171 Aldehyde dehydrogenase family CFK40_RS06595 PF00795 Carbon-nitrogen hydrolase CFK40_RS06610 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS06610 PF05223 NTF2-like N-terminal transpeptidase domain CFK40_RS06610 PF03717 Penicillin-binding Protein dimerisation domain CFK40_RS06615 PF03816 Cell envelope-related transcriptional attenuator domain CFK40_RS06625 PF01381 Helix-turn-helix CFK40_RS06625 PF08671 Anti-repressor SinI CFK40_RS06630 PF13580 SIS domain CFK40_RS06640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CFK40_RS06640 PF00367 phosphotransferase system, EIIB CFK40_RS06640 PF02378 Phosphotransferase system, EIIC CFK40_RS06645 PF07702 UTRA domain CFK40_RS06645 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS06650 PF01979 Amidohydrolase family CFK40_RS06655 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CFK40_RS06660 PF09186 Domain of unknown function (DUF1949) CFK40_RS06660 PF01205 Uncharacterized protein family UPF0029 CFK40_RS06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS06665 PF05384 Sensor protein DegS CFK40_RS06665 PF07730 Histidine kinase CFK40_RS06670 PF00072 Response regulator receiver domain CFK40_RS06670 PF00196 Bacterial regulatory proteins, luxR family CFK40_RS06675 PF02645 Uncharacterised protein, DegV family COG1307 CFK40_RS06680 PF04851 Type III restriction enzyme, res subunit CFK40_RS06680 PF00271 Helicase conserved C-terminal domain CFK40_RS06705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFK40_RS06705 PF00460 Flagella basal body rod protein CFK40_RS06710 PF00700 Bacterial flagellin C-terminal helical region CFK40_RS06710 PF00669 Bacterial flagellin N-terminal helical region CFK40_RS06720 PF02623 FliW protein CFK40_RS06725 PF02599 Global regulator protein family CFK40_RS06730 PF07196 Flagellin hook IN motif CFK40_RS06730 PF07195 Flagellar hook-associated protein 2 C-terminus CFK40_RS06730 PF02465 Flagellar hook-associated protein 2 N-terminus CFK40_RS06735 PF02561 Flagellar protein FliS CFK40_RS06745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CFK40_RS06745 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CFK40_RS06750 PF07517 SecA DEAD-like domain CFK40_RS06750 PF01043 SecA preprotein cross-linking domain CFK40_RS06750 PF02810 SEC-C motif CFK40_RS06750 PF07516 SecA Wing and Scaffold domain CFK40_RS06755 PF00472 RF-1 domain CFK40_RS06755 PF03462 PCRF domain CFK40_RS06760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFK40_RS06765 PF00005 ABC transporter CFK40_RS06770 PF02687 FtsX-like permease family CFK40_RS06770 PF18075 FtsX extracellular domain CFK40_RS06775 PF01551 Peptidase family M23 CFK40_RS06775 PF01464 Transglycosylase SLT domain CFK40_RS06775 PF10145 Phage-related minor tail protein CFK40_RS06780 PF03572 Peptidase family S41 CFK40_RS06780 PF01471 Putative peptidoglycan binding domain CFK40_RS06780 PF17820 PDZ domain CFK40_RS06785 PF17820 PDZ domain CFK40_RS06790 PF13115 YtkA-like CFK40_RS06795 PF17757 UvrB interaction domain CFK40_RS06795 PF02151 UvrB/uvrC motif CFK40_RS06795 PF04851 Type III restriction enzyme, res subunit CFK40_RS06795 PF00271 Helicase conserved C-terminal domain CFK40_RS06795 PF12344 Ultra-violet resistance protein B CFK40_RS06800 PF17760 UvrA interaction domain CFK40_RS06800 PF00005 ABC transporter CFK40_RS06800 PF17755 UvrA DNA-binding domain CFK40_RS06805 PF08830 Protein of unknown function (DUF1806) CFK40_RS06810 PF02585 GlcNAc-PI de-N-acetylase CFK40_RS06815 PF04024 PspC domain CFK40_RS06820 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CFK40_RS06825 PF07475 HPr Serine kinase C-terminal domain CFK40_RS06825 PF02603 HPr Serine kinase N terminus CFK40_RS06830 PF01790 Prolipoprotein diacylglyceryl transferase CFK40_RS06835 PF07670 Nucleoside recognition CFK40_RS06840 PF13419 Haloacid dehalogenase-like hydrolase CFK40_RS06845 PF14602 Hexapeptide repeat of succinyl-transferase CFK40_RS06850 PF04309 Glycerol-3-phosphate responsive antiterminator CFK40_RS06855 PF01266 FAD dependent oxidoreductase CFK40_RS06855 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CFK40_RS06865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS06870 PF00293 NUDIX domain CFK40_RS06875 PF03668 P-loop ATPase protein family CFK40_RS06880 PF01933 Uncharacterised protein family UPF0052 CFK40_RS06885 PF02650 WhiA C-terminal HTH domain CFK40_RS06885 PF10298 WhiA N-terminal LAGLIDADG-like domain CFK40_RS06885 PF14527 WhiA LAGLIDADG-like domain CFK40_RS06890 PF00381 PTS HPr component phosphorylation site CFK40_RS06895 PF00574 Clp protease CFK40_RS06915 PF04198 Putative sugar-binding domain CFK40_RS06920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFK40_RS06920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFK40_RS06925 PF00162 Phosphoglycerate kinase CFK40_RS06930 PF00121 Triosephosphate isomerase CFK40_RS06935 PF01676 Metalloenzyme superfamily CFK40_RS06935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CFK40_RS06940 PF00113 Enolase, C-terminal TIM barrel domain CFK40_RS06940 PF03952 Enolase, N-terminal domain CFK40_RS06945 PF01156 Inosine-uridine preferring nucleoside hydrolase CFK40_RS06955 PF00391 PEP-utilising enzyme, mobile domain CFK40_RS06955 PF05524 PEP-utilising enzyme, N-terminal CFK40_RS06955 PF02896 PEP-utilising enzyme, TIM barrel domain CFK40_RS06965 PF03840 Preprotein translocase SecG subunit CFK40_RS06970 PF12146 Serine aminopeptidase, S33 CFK40_RS06975 PF00575 S1 RNA binding domain CFK40_RS06975 PF17876 Cold shock domain CFK40_RS06975 PF08206 Ribonuclease B OB domain CFK40_RS06975 PF00773 RNB domain CFK40_RS06980 PF02535 ZIP Zinc transporter CFK40_RS06985 PF01668 SmpB protein CFK40_RS07000 PF00009 Elongation factor Tu GTP binding domain CFK40_RS07000 PF16658 Class II release factor RF3, C-terminal domain CFK40_RS07000 PF03144 Elongation factor Tu domain 2 CFK40_RS07010 PF04542 Sigma-70 region 2 CFK40_RS07010 PF08281 Sigma-70, region 4 CFK40_RS07050 PF00085 Thioredoxin CFK40_RS07055 PF01522 Polysaccharide deacetylase CFK40_RS07060 PF00005 ABC transporter CFK40_RS07065 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS07075 PF16363 GDP-mannose 4,6 dehydratase CFK40_RS07080 PF00586 AIR synthase related protein, N-terminal domain CFK40_RS07080 PF02769 AIR synthase related protein, C-terminal domain CFK40_RS07090 PF00009 Elongation factor Tu GTP binding domain CFK40_RS07090 PF03144 Elongation factor Tu domain 2 CFK40_RS07090 PF09107 Elongation factor SelB, winged helix CFK40_RS07090 PF09105 Elongation factor SelB, winged helix CFK40_RS07090 PF09106 Elongation factor SelB, winged helix CFK40_RS07095 PF03841 L-seryl-tRNA selenium transferase CFK40_RS07095 PF12390 Selenocysteine synthase N terminal CFK40_RS07100 PF05343 M42 glutamyl aminopeptidase CFK40_RS07105 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS07115 PF00296 Luciferase-like monooxygenase CFK40_RS07120 PF01212 Beta-eliminating lyase CFK40_RS07125 PF09335 SNARE associated Golgi protein CFK40_RS07130 PF02673 Bacitracin resistance protein BacA CFK40_RS07140 PF07563 Protein of unknown function (DUF1541) CFK40_RS07145 PF01699 Sodium/calcium exchanger protein CFK40_RS07155 PF01209 ubiE/COQ5 methyltransferase family CFK40_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS07180 PF07730 Histidine kinase CFK40_RS07185 PF00072 Response regulator receiver domain CFK40_RS07185 PF00196 Bacterial regulatory proteins, luxR family CFK40_RS07190 PF00463 Isocitrate lyase family CFK40_RS07195 PF01544 CorA-like Mg2+ transporter protein CFK40_RS07200 PF00877 NlpC/P60 family CFK40_RS07205 PF00881 Nitroreductase family CFK40_RS07210 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS07215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CFK40_RS07215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CFK40_RS07220 PF01595 Cyclin M transmembrane N-terminal domain CFK40_RS07220 PF03471 Transporter associated domain CFK40_RS07220 PF00571 CBS domain CFK40_RS07225 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFK40_RS07230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFK40_RS07235 PF01475 Ferric uptake regulator family CFK40_RS07240 PF00950 ABC 3 transport family CFK40_RS07245 PF00005 ABC transporter CFK40_RS07255 PF02583 Metal-sensitive transcriptional repressor CFK40_RS07260 PF00403 Heavy-metal-associated domain CFK40_RS07265 PF01619 Proline dehydrogenase CFK40_RS07270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFK40_RS07270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFK40_RS07270 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS07275 PF02803 Thiolase, C-terminal domain CFK40_RS07275 PF00108 Thiolase, N-terminal domain CFK40_RS07280 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS07280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS07280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS07290 PF03960 ArsC family CFK40_RS07295 PF01597 Glycine cleavage H-protein CFK40_RS07300 PF01751 Toprim domain CFK40_RS07310 PF09383 NIL domain CFK40_RS07310 PF00005 ABC transporter CFK40_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS07320 PF03180 NLPA lipoprotein CFK40_RS07325 PF00005 ABC transporter CFK40_RS07330 PF01458 Uncharacterized protein family (UPF0051) CFK40_RS07335 PF00266 Aminotransferase class-V CFK40_RS07340 PF01592 NifU-like N terminal domain CFK40_RS07345 PF01458 Uncharacterized protein family (UPF0051) CFK40_RS07355 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS07360 PF02423 Ornithine cyclodeaminase/mu-crystallin family CFK40_RS07365 PF00171 Aldehyde dehydrogenase family CFK40_RS07370 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CFK40_RS07370 PF00355 Rieske [2Fe-2S] domain CFK40_RS07380 PF14759 Reductase C-terminal CFK40_RS07380 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS07385 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS07385 PF13977 BetI-type transcriptional repressor, C-terminal CFK40_RS07390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS07390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFK40_RS07400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFK40_RS07400 PF00361 Proton-conducting membrane transporter CFK40_RS07400 PF13244 Domain of unknown function (DUF4040) CFK40_RS07405 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CFK40_RS07410 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFK40_RS07415 PF00361 Proton-conducting membrane transporter CFK40_RS07420 PF01899 Na+/H+ ion antiporter subunit CFK40_RS07425 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CFK40_RS07430 PF03334 Na+/H+ antiporter subunit CFK40_RS07435 PF00989 PAS fold CFK40_RS07435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS07435 PF17203 Single cache domain 3 CFK40_RS07435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CFK40_RS07440 PF12431 Transcriptional regulator CFK40_RS07440 PF00072 Response regulator receiver domain CFK40_RS07440 PF08279 HTH domain CFK40_RS07445 PF03600 Citrate transporter CFK40_RS07450 PF01925 Sulfite exporter TauE/SafE CFK40_RS07455 PF02872 5'-nucleotidase, C-terminal domain CFK40_RS07460 PF08827 Domain of unknown function (DUF1805) CFK40_RS07480 PF09560 Sporulation protein YunB (Spo_YunB) CFK40_RS07490 PF03553 Na+/H+ antiporter family CFK40_RS07495 PF00209 Sodium:neurotransmitter symporter family CFK40_RS07505 PF01551 Peptidase family M23 CFK40_RS07510 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CFK40_RS07515 PF06265 Protein of unknown function (DUF1027) CFK40_RS07530 PF01934 Protein of unknown function DUF86 CFK40_RS07535 PF13344 Haloacid dehalogenase-like hydrolase CFK40_RS07540 PF04608 Phosphatidylglycerophosphatase A CFK40_RS07550 PF01106 NifU-like domain CFK40_RS07555 PF07315 Protein of unknown function (DUF1462) CFK40_RS07560 PF01678 Diaminopimelate epimerase CFK40_RS07565 PF01521 Iron-sulphur cluster biosynthesis CFK40_RS07575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS07580 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS07590 PF06725 3D domain CFK40_RS07595 PF02681 Divergent PAP2 family CFK40_RS07605 PF01048 Phosphorylase superfamily CFK40_RS07610 PF00381 PTS HPr component phosphorylation site CFK40_RS07615 PF02080 TrkA-C domain CFK40_RS07620 PF00999 Sodium/hydrogen exchanger family CFK40_RS07635 PF00080 Copper/zinc superoxide dismutase (SODC) CFK40_RS07635 PF13627 Prokaryotic lipoprotein-attachment site CFK40_RS07640 PF00155 Aminotransferase class I and II CFK40_RS07645 PF00342 Phosphoglucose isomerase CFK40_RS07650 PF00575 S1 RNA binding domain CFK40_RS07655 PF08868 YugN-like family CFK40_RS07660 PF02254 TrkA-N domain CFK40_RS07660 PF07885 Ion channel CFK40_RS07670 PF05343 M42 glutamyl aminopeptidase CFK40_RS07675 PF09383 NIL domain CFK40_RS07675 PF00005 ABC transporter CFK40_RS07680 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS07685 PF03180 NLPA lipoprotein CFK40_RS07695 PF00082 Subtilase family CFK40_RS07695 PF05922 Peptidase inhibitor I9 CFK40_RS07700 PF12822 ECF transporter, substrate-specific component CFK40_RS07705 PF01258 Prokaryotic dksA/traR C4-type zinc finger CFK40_RS07710 PF03061 Thioesterase superfamily CFK40_RS07715 PF01040 UbiA prenyltransferase family CFK40_RS07720 PF00425 chorismate binding enzyme CFK40_RS07725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS07725 PF16582 Middle domain of thiamine pyrophosphate CFK40_RS07725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS07730 PF00561 alpha/beta hydrolase fold CFK40_RS07735 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS07740 PF00501 AMP-binding enzyme CFK40_RS07740 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS07745 PF13302 Acetyltransferase (GNAT) domain CFK40_RS07750 PF00893 Small Multidrug Resistance protein CFK40_RS07755 PF00893 Small Multidrug Resistance protein CFK40_RS07775 PF07282 Putative transposase DNA-binding domain CFK40_RS07775 PF01385 Probable transposase CFK40_RS07775 PF12323 Helix-turn-helix domain CFK40_RS07785 PF00005 ABC transporter CFK40_RS07795 PF00293 NUDIX domain CFK40_RS07800 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS07805 PF00005 ABC transporter CFK40_RS07810 PF01293 Phosphoenolpyruvate carboxykinase CFK40_RS07815 PF02773 S-adenosylmethionine synthetase, C-terminal domain CFK40_RS07815 PF02772 S-adenosylmethionine synthetase, central domain CFK40_RS07815 PF00438 S-adenosylmethionine synthetase, N-terminal domain CFK40_RS07820 PF04134 Protein of unknown function, DUF393 CFK40_RS07825 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS07830 PF10776 Protein of unknown function (DUF2600) CFK40_RS07835 PF00005 ABC transporter CFK40_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS07845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFK40_RS07850 PF06962 Putative rRNA methylase CFK40_RS07855 PF09334 tRNA synthetases class I (M) CFK40_RS07855 PF13603 Leucyl-tRNA synthetase, Domain 2 CFK40_RS07855 PF00133 tRNA synthetases class I (I, L, M and V) CFK40_RS07855 PF08264 Anticodon-binding domain of tRNA CFK40_RS07865 PF00581 Rhodanese-like domain CFK40_RS07895 PF14667 Polysaccharide biosynthesis C-terminal domain CFK40_RS07895 PF01943 Polysaccharide biosynthesis protein CFK40_RS07900 PF01479 S4 domain CFK40_RS07900 PF00849 RNA pseudouridylate synthase CFK40_RS07905 PF08220 DeoR-like helix-turn-helix domain CFK40_RS07910 PF02834 LigT like Phosphoesterase CFK40_RS07920 PF01636 Phosphotransferase enzyme family CFK40_RS07930 PF02390 Putative methyltransferase CFK40_RS07940 PF00753 Metallo-beta-lactamase superfamily CFK40_RS07945 PF00296 Luciferase-like monooxygenase CFK40_RS07955 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS07955 PF17932 Tetracyclin repressor-like, C-terminal domain CFK40_RS07965 PF07486 Cell Wall Hydrolase CFK40_RS07970 PF02735 Ku70/Ku80 beta-barrel domain CFK40_RS07975 PF01068 ATP dependent DNA ligase domain CFK40_RS07985 PF05343 M42 glutamyl aminopeptidase CFK40_RS07990 PF01931 Protein of unknown function DUF84 CFK40_RS07995 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ CFK40_RS08000 PF00085 Thioredoxin CFK40_RS08005 PF07285 Protein of unknown function (DUF1444) CFK40_RS08010 PF14794 Domain of unknown function (DUF4479) CFK40_RS08010 PF01588 Putative tRNA binding domain CFK40_RS08015 PF17854 FtsK alpha domain CFK40_RS08015 PF09397 Ftsk gamma domain CFK40_RS08015 PF01580 FtsK/SpoIIIE family CFK40_RS08025 PF08245 Mur ligase middle domain CFK40_RS08025 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS08025 PF01225 Mur ligase family, catalytic domain CFK40_RS08035 PF12732 YtxH-like protein CFK40_RS08040 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS08045 PF01618 MotA/TolQ/ExbB proton channel family CFK40_RS08050 PF13677 Membrane MotB of proton-channel complex MotA/MotB CFK40_RS08050 PF00691 OmpA family CFK40_RS08055 PF00850 Histone deacetylase domain CFK40_RS08060 PF00571 CBS domain CFK40_RS08065 PF00583 Acetyltransferase (GNAT) family CFK40_RS08070 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS08070 PF00912 Transglycosylase CFK40_RS08075 PF02632 BioY family CFK40_RS08080 PF01479 S4 domain CFK40_RS08080 PF00579 tRNA synthetases class I (W and Y) CFK40_RS08085 PF00163 Ribosomal protein S4/S9 N-terminal domain CFK40_RS08085 PF01479 S4 domain CFK40_RS08090 PF00990 Diguanylate cyclase, GGDEF domain CFK40_RS08095 PF13185 GAF domain CFK40_RS08100 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS08105 PF06160 Septation ring formation regulator, EzrA CFK40_RS08110 PF00266 Aminotransferase class-V CFK40_RS08115 PF02568 Thiamine biosynthesis protein (ThiI) CFK40_RS08115 PF02926 THUMP domain CFK40_RS08120 PF00269 Small, acid-soluble spore proteins, alpha/beta type CFK40_RS08125 PF07969 Amidohydrolase family CFK40_RS08130 PF01513 ATP-NAD kinase CFK40_RS08140 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CFK40_RS08145 PF08534 Redoxin CFK40_RS08150 PF02384 N-6 DNA Methylase CFK40_RS08155 PF00871 Acetokinase family CFK40_RS08160 PF00994 Probable molybdopterin binding domain CFK40_RS08165 PF00582 Universal stress protein family CFK40_RS08170 PF04397 LytTr DNA-binding domain CFK40_RS08170 PF00072 Response regulator receiver domain CFK40_RS08175 PF00005 ABC transporter CFK40_RS08190 PF00557 Metallopeptidase family M24 CFK40_RS08190 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS08200 PF04012 PspA/IM30 family CFK40_RS08210 PF03994 Domain of Unknown Function (DUF350) CFK40_RS08220 PF12706 Beta-lactamase superfamily domain CFK40_RS08235 PF06750 Bacterial Peptidase A24 N-terminal domain CFK40_RS08235 PF01478 Type IV leader peptidase family CFK40_RS08240 PF07690 Major Facilitator Superfamily CFK40_RS08250 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS08250 PF00571 CBS domain CFK40_RS08250 PF07085 DRTGG domain CFK40_RS08250 PF03061 Thioesterase superfamily CFK40_RS08275 PF01368 DHH family CFK40_RS08275 PF02272 DHHA1 domain CFK40_RS08290 PF14034 Sporulation protein YtrH CFK40_RS08295 PF14579 Helix-hairpin-helix motif CFK40_RS08295 PF01336 OB-fold nucleic acid binding domain CFK40_RS08295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFK40_RS08295 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFK40_RS08295 PF02811 PHP domain CFK40_RS08300 PF03949 Malic enzyme, NAD binding domain CFK40_RS08300 PF00390 Malic enzyme, N-terminal domain CFK40_RS08305 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS08305 PF07729 FCD domain CFK40_RS08310 PF01039 Carboxyl transferase domain CFK40_RS08310 PF17848 Acetyl-coA carboxylase zinc finger domain CFK40_RS08315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CFK40_RS08320 PF00365 Phosphofructokinase CFK40_RS08325 PF00224 Pyruvate kinase, barrel domain CFK40_RS08325 PF02887 Pyruvate kinase, alpha/beta domain CFK40_RS08325 PF00391 PEP-utilising enzyme, mobile domain CFK40_RS08330 PF04186 FxsA cytoplasmic membrane protein CFK40_RS08335 PF01594 AI-2E family transporter CFK40_RS08340 PF00285 Citrate synthase, C-terminal domain CFK40_RS08345 PF00180 Isocitrate/isopropylmalate dehydrogenase CFK40_RS08350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CFK40_RS08350 PF00056 lactate/malate dehydrogenase, NAD binding domain CFK40_RS08360 PF00072 Response regulator receiver domain CFK40_RS08360 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS08365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS08365 PF16736 Single Cache-like CFK40_RS08365 PF00989 PAS fold CFK40_RS08365 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS08370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFK40_RS08370 PF00476 DNA polymerase family A CFK40_RS08370 PF01367 5'-3' exonuclease, C-terminal SAM fold CFK40_RS08375 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFK40_RS08375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFK40_RS08375 PF06827 Zinc finger found in FPG and IleRS CFK40_RS08380 PF01121 Dephospho-CoA kinase CFK40_RS08385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFK40_RS08385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFK40_RS08390 PF02675 S-adenosylmethionine decarboxylase CFK40_RS08400 PF03477 ATP cone domain CFK40_RS08405 PF07261 Replication initiation and membrane attachment CFK40_RS08410 PF01695 IstB-like ATP binding protein CFK40_RS08410 PF07319 Primosomal protein DnaI N-terminus CFK40_RS08420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFK40_RS08420 PF03129 Anticodon binding domain CFK40_RS08420 PF02824 TGS domain CFK40_RS08420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_RS08425 PF05198 Translation initiation factor IF-3, N-terminal domain CFK40_RS08425 PF00707 Translation initiation factor IF-3, C-terminal domain CFK40_RS08430 PF01632 Ribosomal protein L35 CFK40_RS08435 PF00453 Ribosomal protein L20 CFK40_RS08440 PF06961 Protein of unknown function (DUF1294) CFK40_RS08445 PF09335 SNARE associated Golgi protein CFK40_RS08460 PF05343 M42 glutamyl aminopeptidase CFK40_RS08465 PF01464 Transglycosylase SLT domain CFK40_RS08470 PF00005 ABC transporter CFK40_RS08490 PF14098 Small, acid-soluble spore protein I CFK40_RS08495 PF00588 SpoU rRNA Methylase family CFK40_RS08495 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFK40_RS08500 PF01409 tRNA synthetases class II core domain (F) CFK40_RS08500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CFK40_RS08505 PF03483 B3/4 domain CFK40_RS08505 PF03147 Ferredoxin-fold anticodon binding domain CFK40_RS08505 PF01588 Putative tRNA binding domain CFK40_RS08505 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CFK40_RS08505 PF03484 tRNA synthetase B5 domain CFK40_RS08510 PF11858 Domain of unknown function (DUF3378) CFK40_RS08510 PF01351 Ribonuclease HII CFK40_RS08515 PF05164 Cell division protein ZapA CFK40_RS08520 PF02674 Colicin V production protein CFK40_RS08525 PF02811 PHP domain CFK40_RS08525 PF14716 Helix-hairpin-helix domain CFK40_RS08525 PF14791 DNA polymerase beta thumb CFK40_RS08530 PF00488 MutS domain V CFK40_RS08530 PF01713 Smr domain CFK40_RS08535 PF03994 Domain of Unknown Function (DUF350) CFK40_RS08545 PF08359 YsiA-like protein, C-terminal region CFK40_RS08545 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS08550 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS08555 PF01012 Electron transfer flavoprotein domain CFK40_RS08560 PF01012 Electron transfer flavoprotein domain CFK40_RS08560 PF00766 Electron transfer flavoprotein FAD-binding domain CFK40_RS08565 PF00085 Thioredoxin CFK40_RS08570 PF08459 UvrC Helix-hairpin-helix N-terminal CFK40_RS08570 PF02151 UvrB/uvrC motif CFK40_RS08570 PF01541 GIY-YIG catalytic domain CFK40_RS08575 PF10702 Protein of unknown function (DUF2507) CFK40_RS08580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CFK40_RS08585 PF02910 Fumarate reductase flavoprotein C-term CFK40_RS08585 PF00890 FAD binding domain CFK40_RS08590 PF13085 2Fe-2S iron-sulfur cluster binding domain CFK40_RS08590 PF13183 4Fe-4S dicluster domain CFK40_RS08595 PF03061 Thioesterase superfamily CFK40_RS08600 PF00196 Bacterial regulatory proteins, luxR family CFK40_RS08610 PF00857 Isochorismatase family CFK40_RS08615 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CFK40_RS08615 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CFK40_RS08615 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CFK40_RS08620 PF01467 Cytidylyltransferase-like CFK40_RS08625 PF03471 Transporter associated domain CFK40_RS08625 PF00999 Sodium/hydrogen exchanger family CFK40_RS08625 PF02080 TrkA-C domain CFK40_RS08630 PF01047 MarR family CFK40_RS08635 PF01177 Asp/Glu/Hydantoin racemase CFK40_RS08640 PF10646 Sporulation and spore germination CFK40_RS08645 PF03725 3' exoribonuclease family, domain 2 CFK40_RS08645 PF01138 3' exoribonuclease family, domain 1 CFK40_RS08650 PF01725 Ham1 family CFK40_RS08655 PF12850 Calcineurin-like phosphoesterase superfamily domain CFK40_RS08675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFK40_RS08675 PF05698 Bacterial trigger factor protein (TF) C-terminus CFK40_RS08675 PF05697 Bacterial trigger factor protein (TF) CFK40_RS08680 PF06689 ClpX C4-type zinc finger CFK40_RS08680 PF10431 C-terminal, D2-small domain, of ClpB protein CFK40_RS08680 PF07724 AAA domain (Cdc48 subfamily) CFK40_RS08685 PF05362 Lon protease (S16) C-terminal proteolytic domain CFK40_RS08685 PF02190 ATP-dependent protease La (LON) substrate-binding domain CFK40_RS08685 PF00004 ATPase family associated with various cellular activities (AAA) CFK40_RS08690 PF01926 50S ribosome-binding GTPase CFK40_RS08695 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFK40_RS08700 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS08705 PF00005 ABC transporter CFK40_RS08715 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CFK40_RS08715 PF01488 Shikimate / quinate 5-dehydrogenase CFK40_RS08715 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CFK40_RS08720 PF01578 Cytochrome C assembly protein CFK40_RS08725 PF03900 Porphobilinogen deaminase, C-terminal domain CFK40_RS08725 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CFK40_RS08735 PF00490 Delta-aminolevulinic acid dehydratase CFK40_RS08740 PF00202 Aminotransferase class-III CFK40_RS08745 PF01476 LysM domain CFK40_RS08745 PF01476 LysM domain CFK40_RS08760 PF00133 tRNA synthetases class I (I, L, M and V) CFK40_RS08760 PF10458 Valyl tRNA synthetase tRNA binding arm CFK40_RS08760 PF08264 Anticodon-binding domain of tRNA CFK40_RS08770 PF08443 RimK-like ATP-grasp domain CFK40_RS08770 PF18030 RimK PreATP-grasp domain CFK40_RS08775 PF08245 Mur ligase middle domain CFK40_RS08775 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS08780 PF00990 Diguanylate cyclase, GGDEF domain CFK40_RS08780 PF00072 Response regulator receiver domain CFK40_RS08790 PF04002 RadC-like JAB domain CFK40_RS08800 PF04085 rod shape-determining protein MreC CFK40_RS08810 PF03775 Septum formation inhibitor MinC, C-terminal domain CFK40_RS08815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CFK40_RS08825 PF02163 Peptidase family M50 CFK40_RS08830 PF00829 Ribosomal prokaryotic L21 protein CFK40_RS08835 PF04327 Cysteine protease Prp CFK40_RS08840 PF01016 Ribosomal L27 protein CFK40_RS08850 PF01926 50S ribosome-binding GTPase CFK40_RS08850 PF01018 GTP1/OBG CFK40_RS08850 PF09269 Domain of unknown function (DUF1967) CFK40_RS08855 PF01476 LysM domain CFK40_RS08860 PF02540 NAD synthase CFK40_RS08870 PF01709 Transcriptional regulator CFK40_RS08875 PF07499 RuvA, C-terminal domain CFK40_RS08875 PF01330 RuvA N terminal domain CFK40_RS08880 PF17864 RuvB AAA lid domain CFK40_RS08880 PF05491 RuvB C-terminal winged helix domain CFK40_RS08880 PF05496 Holliday junction DNA helicase RuvB P-loop domain CFK40_RS08890 PF02547 Queuosine biosynthesis protein CFK40_RS08895 PF01702 Queuine tRNA-ribosyltransferase CFK40_RS08900 PF02699 Preprotein translocase subunit CFK40_RS08905 PF12670 Protein of unknown function (DUF3792) CFK40_RS08910 PF01943 Polysaccharide biosynthesis protein CFK40_RS08910 PF14667 Polysaccharide biosynthesis C-terminal domain CFK40_RS08920 PF07549 SecD/SecF GG Motif CFK40_RS08920 PF02355 Protein export membrane protein CFK40_RS08925 PF06305 Lipopolysaccharide assembly protein A domain CFK40_RS08930 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CFK40_RS08930 PF01368 DHH family CFK40_RS08930 PF02272 DHHA1 domain CFK40_RS08930 PF17768 RecJ OB domain CFK40_RS08935 PF00156 Phosphoribosyl transferase domain CFK40_RS08940 PF13291 ACT domain CFK40_RS08940 PF04607 Region found in RelA / SpoT proteins CFK40_RS08940 PF02824 TGS domain CFK40_RS08945 PF02580 D-Tyr-tRNA(Tyr) deacylase CFK40_RS08950 PF01520 N-acetylmuramoyl-L-alanine amidase CFK40_RS08950 PF08239 Bacterial SH3 domain CFK40_RS08955 PF03129 Anticodon binding domain CFK40_RS08955 PF13393 Histidyl-tRNA synthetase CFK40_RS08960 PF00152 tRNA synthetases class II (D, K and N) CFK40_RS08960 PF02938 GAD domain CFK40_RS08960 PF01336 OB-fold nucleic acid binding domain CFK40_RS08975 PF16193 AAA C-terminal domain CFK40_RS08975 PF05496 Holliday junction DNA helicase RuvB P-loop domain CFK40_RS08975 PF12002 MgsA AAA+ ATPase C terminal CFK40_RS08980 PF02082 Transcriptional regulator CFK40_RS08985 PF00266 Aminotransferase class-V CFK40_RS09000 PF14490 Helix-hairpin-helix containing domain CFK40_RS09000 PF13538 UvrD-like helicase C-terminal domain CFK40_RS09000 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CFK40_RS09010 PF01594 AI-2E family transporter CFK40_RS09015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_RS09015 PF01411 tRNA synthetases class II (A) CFK40_RS09015 PF02272 DHHA1 domain CFK40_RS09020 PF06135 IreB regulatory phosphoprotein CFK40_RS09025 PF03652 Holliday junction resolvase CFK40_RS09030 PF06949 Protein of unknown function (DUF1292) CFK40_RS09035 PF02618 YceG-like family CFK40_RS09040 PF01596 O-methyltransferase CFK40_RS09045 PF00485 Phosphoribulokinase / Uridine kinase family CFK40_RS09050 PF03449 Transcription elongation factor, N-terminal CFK40_RS09050 PF01272 Transcription elongation factor, GreA/GreB, C-term CFK40_RS09055 PF07423 Domain of unknown function (DUF1510) CFK40_RS09060 PF01048 Phosphorylase superfamily CFK40_RS09070 PF04545 Sigma-70, region 4 CFK40_RS09070 PF04542 Sigma-70 region 2 CFK40_RS09075 PF03334 Na+/H+ antiporter subunit CFK40_RS09080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CFK40_RS09085 PF01899 Na+/H+ ion antiporter subunit CFK40_RS09090 PF00361 Proton-conducting membrane transporter CFK40_RS09095 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFK40_RS09100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFK40_RS09100 PF00361 Proton-conducting membrane transporter CFK40_RS09100 PF13244 Domain of unknown function (DUF4040) CFK40_RS09105 PF08970 Sporulation inhibitor A CFK40_RS09115 PF01926 50S ribosome-binding GTPase CFK40_RS09120 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CFK40_RS09120 PF01488 Shikimate / quinate 5-dehydrogenase CFK40_RS09120 PF08501 Shikimate dehydrogenase substrate binding domain CFK40_RS09125 PF01985 CRS1 / YhbY (CRM) domain CFK40_RS09130 PF01467 Cytidylyltransferase-like CFK40_RS09135 PF01966 HD domain CFK40_RS09145 PF13649 Methyltransferase domain CFK40_RS09150 PF10531 SLBB domain CFK40_RS09155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFK40_RS09160 PF03772 Competence protein CFK40_RS09160 PF13567 Domain of unknown function (DUF4131) CFK40_RS09160 PF00753 Metallo-beta-lactamase superfamily CFK40_RS09165 PF14141 YqzM-like protein CFK40_RS09170 PF06144 DNA polymerase III, delta subunit CFK40_RS09175 PF01649 Ribosomal protein S20 CFK40_RS09180 PF03418 Germination protease CFK40_RS09185 PF07454 Stage II sporulation protein P (SpoIIP) CFK40_RS09195 PF03144 Elongation factor Tu domain 2 CFK40_RS09195 PF00679 Elongation factor G C-terminus CFK40_RS09195 PF14492 Elongation Factor G, domain II CFK40_RS09195 PF00009 Elongation factor Tu GTP binding domain CFK40_RS09195 PF06421 GTP-binding protein LepA C-terminus CFK40_RS09200 PF06969 HemN C-terminal domain CFK40_RS09200 PF04055 Radical SAM superfamily CFK40_RS09205 PF01628 HrcA protein C terminal domain CFK40_RS09210 PF01025 GrpE CFK40_RS09215 PF00012 Hsp70 protein CFK40_RS09220 PF01556 DnaJ C terminal domain CFK40_RS09220 PF00684 DnaJ central domain CFK40_RS09220 PF00226 DnaJ domain CFK40_RS09230 PF04452 RNA methyltransferase CFK40_RS09235 PF00919 Uncharacterized protein family UPF0004 CFK40_RS09235 PF01938 TRAM domain CFK40_RS09235 PF04055 Radical SAM superfamily CFK40_RS09240 PF01791 DeoC/LacD family aldolase CFK40_RS09245 PF01165 Ribosomal protein S21 CFK40_RS09250 PF09424 Yqey-like protein CFK40_RS09255 PF01972 Serine dehydrogenase proteinase CFK40_RS09255 PF01957 NfeD-like C-terminal, partner-binding CFK40_RS09260 PF12127 SigmaW regulon antibacterial CFK40_RS09270 PF07873 YabP family CFK40_RS09275 PF06898 Putative stage IV sporulation protein YqfD CFK40_RS09280 PF02562 PhoH-like protein CFK40_RS09285 PF01966 HD domain CFK40_RS09285 PF07698 7TM receptor with intracellular HD hydrolase CFK40_RS09285 PF07697 7TM-HD extracellular CFK40_RS09290 PF02130 Uncharacterized protein family UPF0054 CFK40_RS09300 PF01926 50S ribosome-binding GTPase CFK40_RS09300 PF07650 KH domain CFK40_RS09305 PF14006 YqzL-like protein CFK40_RS09310 PF02565 Recombination protein O C terminal CFK40_RS09310 PF11967 Recombination protein O N terminal CFK40_RS09315 PF02091 Glycyl-tRNA synthetase alpha subunit CFK40_RS09320 PF05746 DALR anticodon binding domain CFK40_RS09320 PF02092 Glycyl-tRNA synthetase beta subunit CFK40_RS09325 PF00571 CBS domain CFK40_RS09325 PF08279 HTH domain CFK40_RS09330 PF03618 Kinase/pyrophosphorylase CFK40_RS09335 PF08275 DNA primase catalytic core, N-terminal domain CFK40_RS09335 PF10410 DnaB-helicase binding domain of primase CFK40_RS09335 PF01807 CHC2 zinc finger CFK40_RS09340 PF04545 Sigma-70, region 4 CFK40_RS09340 PF04539 Sigma-70 region 3 CFK40_RS09340 PF04542 Sigma-70 region 2 CFK40_RS09340 PF00140 Sigma-70 factor, region 1.2 CFK40_RS09340 PF03979 Sigma-70 factor, region 1.1 CFK40_RS09345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFK40_RS09350 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CFK40_RS09355 PF01784 NIF3 (NGG1p interacting factor 3) CFK40_RS09360 PF00271 Helicase conserved C-terminal domain CFK40_RS09360 PF00270 DEAD/DEAH box helicase CFK40_RS09365 PF01261 Xylose isomerase-like TIM barrel CFK40_RS09375 PF01022 Bacterial regulatory protein, arsR family CFK40_RS09380 PF02040 Arsenical pump membrane protein CFK40_RS09385 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFK40_RS09405 PF01895 PhoU domain CFK40_RS09440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CFK40_RS09440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CFK40_RS09445 PF07690 Major Facilitator Superfamily CFK40_RS09450 PF03717 Penicillin-binding Protein dimerisation domain CFK40_RS09450 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS09455 PF12849 PBP superfamily domain CFK40_RS09460 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS09465 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS09470 PF00005 ABC transporter CFK40_RS09475 PF01895 PhoU domain CFK40_RS09490 PF00471 Ribosomal protein L33 CFK40_RS09495 PF01812 5-formyltetrahydrofolate cyclo-ligase family CFK40_RS09500 PF00899 ThiF family CFK40_RS09510 PF01694 Rhomboid family CFK40_RS09520 PF03323 Bacillus/Clostridium GerA spore germination protein CFK40_RS09530 PF00480 ROK family CFK40_RS09535 PF00884 Sulfatase CFK40_RS09545 PF00753 Metallo-beta-lactamase superfamily CFK40_RS09550 PF11117 Protein of unknown function (DUF2626) CFK40_RS09575 PF07963 Prokaryotic N-terminal methylation motif CFK40_RS09580 PF00482 Type II secretion system (T2SS), protein F CFK40_RS09585 PF00437 Type II/IV secretion system protein CFK40_RS09590 PF01202 Shikimate kinase CFK40_RS09600 PF11079 Bacterial protein YqhG of unknown function CFK40_RS09605 PF00271 Helicase conserved C-terminal domain CFK40_RS09605 PF00176 SNF2 family N-terminal domain CFK40_RS09610 PF08669 Glycine cleavage T-protein C-terminal barrel domain CFK40_RS09610 PF01571 Aminomethyltransferase folate-binding domain CFK40_RS09615 PF02347 Glycine cleavage system P-protein CFK40_RS09620 PF02347 Glycine cleavage system P-protein CFK40_RS09630 PF01381 Helix-turn-helix CFK40_RS09635 PF05378 Hydantoinase/oxoprolinase N-terminal region CFK40_RS09635 PF01968 Hydantoinase/oxoprolinase CFK40_RS09640 PF02538 Hydantoinase B/oxoprolinase CFK40_RS09650 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CFK40_RS09655 PF13302 Acetyltransferase (GNAT) domain CFK40_RS09670 PF00581 Rhodanese-like domain CFK40_RS09680 PF03477 ATP cone domain CFK40_RS09680 PF02867 Ribonucleotide reductase, barrel domain CFK40_RS09680 PF00317 Ribonucleotide reductase, all-alpha domain CFK40_RS09690 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CFK40_RS09690 PF02867 Ribonucleotide reductase, barrel domain CFK40_RS09705 PF00194 Eukaryotic-type carbonic anhydrase CFK40_RS09715 PF02742 Iron dependent repressor, metal binding and dimerisation domain CFK40_RS09715 PF01325 Iron dependent repressor, N-terminal DNA binding domain CFK40_RS09720 PF01734 Patatin-like phospholipase CFK40_RS09730 PF11085 Conserved membrane protein YqhR CFK40_RS09735 PF01220 Dehydroquinase class II CFK40_RS09740 PF00557 Metallopeptidase family M24 CFK40_RS09740 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS09745 PF01132 Elongation factor P (EF-P) OB domain CFK40_RS09745 PF09285 Elongation factor P, C-terminal CFK40_RS09745 PF08207 Elongation factor P (EF-P) KOW-like domain CFK40_RS09765 PF09548 Stage III sporulation protein AB (spore_III_AB) CFK40_RS09770 PF06686 Stage III sporulation protein AC/AD protein family CFK40_RS09775 PF06686 Stage III sporulation protein AC/AD protein family CFK40_RS09780 PF09546 Stage III sporulation protein AE (spore_III_AE) CFK40_RS09785 PF09581 Stage III sporulation protein AF (Spore_III_AF) CFK40_RS09795 PF12685 SpoIIIAH-like protein CFK40_RS09800 PF00364 Biotin-requiring enzyme CFK40_RS09805 PF00289 Biotin carboxylase, N-terminal domain CFK40_RS09805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFK40_RS09805 PF02785 Biotin carboxylase C-terminal domain CFK40_RS09810 PF03780 Asp23 family, cell envelope-related function CFK40_RS09815 PF01029 NusB family CFK40_RS09820 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CFK40_RS09820 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CFK40_RS09825 PF13742 OB-fold nucleic acid binding domain CFK40_RS09825 PF02601 Exonuclease VII, large subunit CFK40_RS09830 PF02609 Exonuclease VII small subunit CFK40_RS09835 PF00348 Polyprenyl synthetase CFK40_RS09845 PF01728 FtsJ-like methyltransferase CFK40_RS09845 PF01479 S4 domain CFK40_RS09850 PF01316 Arginine repressor, DNA binding domain CFK40_RS09850 PF02863 Arginine repressor, C-terminal domain CFK40_RS09855 PF13476 AAA domain CFK40_RS09860 PF05580 SpoIVB peptidase S55 CFK40_RS09860 PF17820 PDZ domain CFK40_RS09865 PF08769 Sporulation initiation factor Spo0A C terminal CFK40_RS09865 PF00072 Response regulator receiver domain CFK40_RS09985 PF11118 Protein of unknown function (DUF2627) CFK40_RS09990 PF00158 Sigma-54 interaction domain CFK40_RS09990 PF00989 PAS fold CFK40_RS09990 PF02954 Bacterial regulatory protein, Fis family CFK40_RS09995 PF01515 Phosphate acetyl/butaryl transferase CFK40_RS10000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_RS10000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFK40_RS10005 PF00871 Acetokinase family CFK40_RS10010 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS10010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFK40_RS10015 PF00676 Dehydrogenase E1 component CFK40_RS10020 PF02780 Transketolase, C-terminal domain CFK40_RS10020 PF02779 Transketolase, pyrimidine binding domain CFK40_RS10025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFK40_RS10025 PF02817 e3 binding domain CFK40_RS10025 PF00364 Biotin-requiring enzyme CFK40_RS10030 PF06491 Disulphide isomerase CFK40_RS10035 PF06081 Aromatic acid exporter family member 1 CFK40_RS10035 PF11728 Putative aromatic acid exporter C-terminal domain CFK40_RS10040 PF02310 B12 binding domain CFK40_RS10040 PF01642 Methylmalonyl-CoA mutase CFK40_RS10050 PF01039 Carboxyl transferase domain CFK40_RS10055 PF07687 Peptidase dimerisation domain CFK40_RS10055 PF01546 Peptidase family M20/M25/M40 CFK40_RS10060 PF00817 impB/mucB/samB family CFK40_RS10060 PF11798 IMS family HHH motif CFK40_RS10060 PF11799 impB/mucB/samB family C-terminal domain CFK40_RS10065 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS10065 PF08361 MAATS-type transcriptional repressor, C-terminal region CFK40_RS10070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS10095 PF07690 Major Facilitator Superfamily CFK40_RS10110 PF03819 MazG nucleotide pyrophosphohydrolase domain CFK40_RS10115 PF03641 Possible lysine decarboxylase CFK40_RS10150 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS10155 PF02627 Carboxymuconolactone decarboxylase family CFK40_RS10160 PF00171 Aldehyde dehydrogenase family CFK40_RS10165 PF12706 Beta-lactamase superfamily domain CFK40_RS10165 PF00753 Metallo-beta-lactamase superfamily CFK40_RS10170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFK40_RS10175 PF03009 Glycerophosphoryl diester phosphodiesterase family CFK40_RS10180 PF01546 Peptidase family M20/M25/M40 CFK40_RS10185 PF00753 Metallo-beta-lactamase superfamily CFK40_RS10190 PF00106 short chain dehydrogenase CFK40_RS10200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS10205 PF00155 Aminotransferase class I and II CFK40_RS10205 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS10210 PF00171 Aldehyde dehydrogenase family CFK40_RS10215 PF01546 Peptidase family M20/M25/M40 CFK40_RS10215 PF07687 Peptidase dimerisation domain CFK40_RS10225 PF01546 Peptidase family M20/M25/M40 CFK40_RS10225 PF07687 Peptidase dimerisation domain CFK40_RS10235 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS10240 PF01380 SIS domain CFK40_RS10240 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS10250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFK40_RS10250 PF13378 Enolase C-terminal domain-like CFK40_RS10265 PF08241 Methyltransferase domain CFK40_RS10295 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CFK40_RS10355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CFK40_RS10385 PF13302 Acetyltransferase (GNAT) domain CFK40_RS10390 PF00557 Metallopeptidase family M24 CFK40_RS10390 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS10395 PF00474 Sodium:solute symporter family CFK40_RS10420 PF13419 Haloacid dehalogenase-like hydrolase CFK40_RS10425 PF07722 Peptidase C26 CFK40_RS10435 PF16655 PhoD-like phosphatase, N-terminal domain CFK40_RS10435 PF09423 PhoD-like phosphatase CFK40_RS10460 PF08281 Sigma-70, region 4 CFK40_RS10460 PF04542 Sigma-70 region 2 CFK40_RS10470 PF00155 Aminotransferase class I and II CFK40_RS10470 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS10475 PF00892 EamA-like transporter family CFK40_RS10490 PF13673 Acetyltransferase (GNAT) domain CFK40_RS10490 PF04229 GrpB protein CFK40_RS10500 PF00730 HhH-GPD superfamily base excision DNA repair protein CFK40_RS10500 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CFK40_RS10505 PF12833 Helix-turn-helix domain CFK40_RS10505 PF02805 Metal binding domain of Ada CFK40_RS10510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFK40_RS10510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFK40_RS10515 PF03992 Antibiotic biosynthesis monooxygenase CFK40_RS10520 PF00583 Acetyltransferase (GNAT) family CFK40_RS10540 PF00302 Chloramphenicol acetyltransferase CFK40_RS10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS10570 PF03466 LysR substrate binding domain CFK40_RS10575 PF01810 LysE type translocator CFK40_RS10590 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS10595 PF04299 Putative FMN-binding domain CFK40_RS10600 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS10600 PF00155 Aminotransferase class I and II CFK40_RS10605 PF01042 Endoribonuclease L-PSP CFK40_RS10615 PF03860 Domain of Unknown Function (DUF326) CFK40_RS10625 PF00248 Aldo/keto reductase family CFK40_RS10630 PF01569 PAP2 superfamily CFK40_RS10635 PF00005 ABC transporter CFK40_RS10645 PF08241 Methyltransferase domain CFK40_RS10650 PF00300 Histidine phosphatase superfamily (branch 1) CFK40_RS10670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFK40_RS10725 PF00817 impB/mucB/samB family CFK40_RS10725 PF11799 impB/mucB/samB family C-terminal domain CFK40_RS10725 PF11798 IMS family HHH motif CFK40_RS10730 PF00248 Aldo/keto reductase family CFK40_RS10735 PF00293 NUDIX domain CFK40_RS10745 PF01944 Stage II sporulation protein M CFK40_RS10750 PF01475 Ferric uptake regulator family CFK40_RS10760 PF14004 Protein of unknown function (DUF4227) CFK40_RS10765 PF00589 Phage integrase family CFK40_RS10765 PF02899 Phage integrase, N-terminal SAM-like domain CFK40_RS10770 PF01676 Metalloenzyme superfamily CFK40_RS10775 PF01048 Phosphorylase superfamily CFK40_RS10780 PF00591 Glycosyl transferase family, a/b domain CFK40_RS10780 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CFK40_RS10780 PF02885 Glycosyl transferase family, helical bundle domain CFK40_RS10785 PF07943 Penicillin-binding protein 5, C-terminal domain CFK40_RS10785 PF00768 D-alanyl-D-alanine carboxypeptidase CFK40_RS10790 PF01740 STAS domain CFK40_RS10795 PF13581 Histidine kinase-like ATPase domain CFK40_RS10800 PF04539 Sigma-70 region 3 CFK40_RS10800 PF04545 Sigma-70, region 4 CFK40_RS10800 PF04542 Sigma-70 region 2 CFK40_RS10805 PF12164 Stage V sporulation protein AA CFK40_RS10810 PF13782 Stage V sporulation protein AB CFK40_RS10815 PF03323 Bacillus/Clostridium GerA spore germination protein CFK40_RS10820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFK40_RS10820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CFK40_RS10825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFK40_RS10830 PF00583 Acetyltransferase (GNAT) family CFK40_RS10835 PF09680 Family of unknown function CFK40_RS10840 PF02616 Segregation and condensation protein ScpA CFK40_RS10845 PF04079 Segregation and condensation complex subunit ScpB CFK40_RS10850 PF07943 Penicillin-binding protein 5, C-terminal domain CFK40_RS10850 PF00768 D-alanyl-D-alanine carboxypeptidase CFK40_RS10855 PF07670 Nucleoside recognition CFK40_RS10860 PF07670 Nucleoside recognition CFK40_RS10865 PF01479 S4 domain CFK40_RS10865 PF00849 RNA pseudouridylate synthase CFK40_RS10870 PF00578 AhpC/TSA family CFK40_RS10875 PF05140 ResB-like family CFK40_RS10880 PF01578 Cytochrome C assembly protein CFK40_RS10885 PF00072 Response regulator receiver domain CFK40_RS10885 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS10890 PF00989 PAS fold CFK40_RS10890 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS10890 PF18698 Histidine kinase sensor domain CFK40_RS10890 PF00672 HAMP domain CFK40_RS10910 PF14493 Helix-turn-helix domain CFK40_RS10915 PF00270 DEAD/DEAH box helicase CFK40_RS10915 PF00271 Helicase conserved C-terminal domain CFK40_RS10920 PF02517 CPBP intramembrane metalloprotease CFK40_RS10930 PF05067 Manganese containing catalase CFK40_RS10945 PF00149 Calcineurin-like phosphoesterase CFK40_RS10950 PF05389 Negative regulator of genetic competence (MecA) CFK40_RS10955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_RS10955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFK40_RS10965 PF17763 Glutaminase/Asparaginase C-terminal domain CFK40_RS10965 PF00710 Asparaginase, N-terminal CFK40_RS10970 PF13367 PrsW family intramembrane metalloprotease CFK40_RS10975 PF07486 Cell Wall Hydrolase CFK40_RS10975 PF01471 Putative peptidoglycan binding domain CFK40_RS10980 PF14620 YpeB sporulation CFK40_RS10980 PF03413 Peptidase propeptide and YPEB domain CFK40_RS10990 PF02224 Cytidylate kinase CFK40_RS10995 PF00575 S1 RNA binding domain CFK40_RS11005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CFK40_RS11005 PF01926 50S ribosome-binding GTPase CFK40_RS11010 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CFK40_RS11010 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CFK40_RS11030 PF09547 Stage IV sporulation protein A (spore_IV_A) CFK40_RS11035 PF00216 Bacterial DNA-binding protein CFK40_RS11040 PF02081 Tryptophan RNA-binding attenuator protein CFK40_RS11045 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CFK40_RS11050 PF01209 ubiE/COQ5 methyltransferase family CFK40_RS11055 PF00348 Polyprenyl synthetase CFK40_RS11060 PF00334 Nucleoside diphosphate kinase CFK40_RS11065 PF01264 Chorismate synthase CFK40_RS11070 PF01761 3-dehydroquinate synthase CFK40_RS11075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFK40_RS11085 PF08864 UPF0302 domain CFK40_RS11085 PF08858 IDEAL domain CFK40_RS11090 PF10673 Protein of unknown function (DUF2487) CFK40_RS11095 PF00355 Rieske [2Fe-2S] domain CFK40_RS11100 PF00033 Cytochrome b/b6/petB CFK40_RS11105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CFK40_RS11105 PF00032 Cytochrome b(C-terminal)/b6/petD CFK40_RS11110 PF07187 Protein of unknown function (DUF1405) CFK40_RS11120 PF04298 Putative neutral zinc metallopeptidase CFK40_RS11125 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CFK40_RS11125 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CFK40_RS11130 PF03819 MazG nucleotide pyrophosphohydrolase domain CFK40_RS11135 PF02142 MGS-like domain CFK40_RS11140 PF13439 Glycosyltransferase Family 4 CFK40_RS11140 PF00534 Glycosyl transferases group 1 CFK40_RS11145 PF01743 Poly A polymerase head domain CFK40_RS11145 PF13735 tRNA nucleotidyltransferase domain 2 putative CFK40_RS11145 PF12627 Probable RNA and SrmB- binding site of polymerase A CFK40_RS11150 PF08279 HTH domain CFK40_RS11150 PF03099 Biotin/lipoate A/B protein ligase family CFK40_RS11150 PF02237 Biotin protein ligase C terminal domain CFK40_RS11155 PF02548 Ketopantoate hydroxymethyltransferase CFK40_RS11160 PF02569 Pantoate-beta-alanine ligase CFK40_RS11165 PF02261 Aspartate decarboxylase CFK40_RS11170 PF00929 Exonuclease CFK40_RS11170 PF04851 Type III restriction enzyme, res subunit CFK40_RS11170 PF13307 Helicase C-terminal domain CFK40_RS11175 PF14084 Protein of unknown function (DUF4264) CFK40_RS11185 PF00155 Aminotransferase class I and II CFK40_RS11190 PF00152 tRNA synthetases class II (D, K and N) CFK40_RS11190 PF01336 OB-fold nucleic acid binding domain CFK40_RS11195 PF07261 Replication initiation and membrane attachment CFK40_RS11200 PF00633 Helix-hairpin-helix motif CFK40_RS11200 PF10576 Iron-sulfur binding domain of endonuclease III CFK40_RS11200 PF00730 HhH-GPD superfamily base excision DNA repair protein CFK40_RS11205 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS11205 PF00912 Transglycosylase CFK40_RS11210 PF03838 Recombination protein U CFK40_RS11215 PF10720 Protein of unknown function (DUF2515) CFK40_RS11230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFK40_RS11235 PF05103 DivIVA protein CFK40_RS11245 PF02926 THUMP domain CFK40_RS11245 PF01170 Putative RNA methylase family UPF0020 CFK40_RS11250 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CFK40_RS11255 PF02797 Chalcone and stilbene synthases, C-terminal domain CFK40_RS11255 PF00195 Chalcone and stilbene synthases, N-terminal domain CFK40_RS11260 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CFK40_RS11275 PF08803 Putative mono-oxygenase ydhR CFK40_RS11280 PF13031 Protein of unknown function (DUF3892) CFK40_RS11290 PF02592 Putative vitamin uptake transporter CFK40_RS11295 PF00313 'Cold-shock' DNA-binding domain CFK40_RS11300 PF01268 Formate--tetrahydrofolate ligase CFK40_RS11305 PF01966 HD domain CFK40_RS11310 PF00303 Thymidylate synthase CFK40_RS11315 PF00186 Dihydrofolate reductase CFK40_RS11320 PF12804 MobA-like NTP transferase domain CFK40_RS11325 PF02416 mttA/Hcf106 family CFK40_RS11330 PF02416 mttA/Hcf106 family CFK40_RS11335 PF00902 Sec-independent protein translocase protein (TatC) CFK40_RS11340 PF06855 YozE SAM-like fold CFK40_RS11345 PF12320 Type 5 capsule protein repressor C-terminal domain CFK40_RS11345 PF00149 Calcineurin-like phosphoesterase CFK40_RS11350 PF13476 AAA domain CFK40_RS11360 PF01625 Peptide methionine sulfoxide reductase CFK40_RS11360 PF01641 SelR domain CFK40_RS11375 PF01476 LysM domain CFK40_RS11375 PF00246 Zinc carboxypeptidase CFK40_RS11380 PF00037 4Fe-4S binding domain CFK40_RS11385 PF00708 Acylphosphatase CFK40_RS11390 PF03576 Peptidase family S58 CFK40_RS11395 PF00355 Rieske [2Fe-2S] domain CFK40_RS11395 PF01266 FAD dependent oxidoreductase CFK40_RS11400 PF03466 LysR substrate binding domain CFK40_RS11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS11405 PF00285 Citrate synthase, C-terminal domain CFK40_RS11415 PF02683 Cytochrome C biogenesis protein transmembrane region CFK40_RS11420 PF00578 AhpC/TSA family CFK40_RS11425 PF01022 Bacterial regulatory protein, arsR family CFK40_RS11430 PF13462 Thioredoxin CFK40_RS11435 PF02600 Disulfide bond formation protein DsbB CFK40_RS11450 PF01966 HD domain CFK40_RS11455 PF07690 Major Facilitator Superfamily CFK40_RS11460 PF11495 Archaeal transcriptional regulator TrmB CFK40_RS11460 PF01978 Sugar-specific transcriptional regulator TrmB CFK40_RS11465 PF01261 Xylose isomerase-like TIM barrel CFK40_RS11470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFK40_RS11470 PF06827 Zinc finger found in FPG and IleRS CFK40_RS11470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFK40_RS11475 PF04239 Protein of unknown function (DUF421) CFK40_RS11480 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS11490 PF03649 Uncharacterised protein family (UPF0014) CFK40_RS11495 PF00005 ABC transporter CFK40_RS11495 PF12857 TOBE-like domain CFK40_RS11505 PF13823 Alcohol dehydrogenase GroES-associated CFK40_RS11505 PF00107 Zinc-binding dehydrogenase CFK40_RS11505 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS11510 PF01367 5'-3' exonuclease, C-terminal SAM fold CFK40_RS11510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFK40_RS11515 PF00350 Dynamin family CFK40_RS11520 PF00478 IMP dehydrogenase / GMP reductase domain CFK40_RS11520 PF00571 CBS domain CFK40_RS11525 PF01613 Flavin reductase like domain CFK40_RS11530 PF01039 Carboxyl transferase domain CFK40_RS11535 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS11540 PF00682 HMGL-like CFK40_RS11545 PF00364 Biotin-requiring enzyme CFK40_RS11550 PF02785 Biotin carboxylase C-terminal domain CFK40_RS11550 PF00289 Biotin carboxylase, N-terminal domain CFK40_RS11550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFK40_RS11555 PF00501 AMP-binding enzyme CFK40_RS11555 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS11560 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS11560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS11560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS11565 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS11570 PF00521 DNA gyrase/topoisomerase IV, subunit A CFK40_RS11570 PF03989 DNA gyrase C-terminal domain, beta-propeller CFK40_RS11575 PF00204 DNA gyrase B CFK40_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS11575 PF00986 DNA gyrase B subunit, carboxyl terminus CFK40_RS11575 PF01751 Toprim domain CFK40_RS11580 PF13380 CoA binding domain CFK40_RS11585 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS11590 PF00571 CBS domain CFK40_RS11590 PF00005 ABC transporter CFK40_RS11595 PF02660 Glycerol-3-phosphate acyltransferase CFK40_RS11600 PF02649 Type I GTP cyclohydrolase folE2 CFK40_RS11605 PF01809 Putative membrane protein insertion efficiency factor CFK40_RS11615 PF03061 Thioesterase superfamily CFK40_RS11625 PF00578 AhpC/TSA family CFK40_RS11635 PF00330 Aconitase family (aconitate hydratase) CFK40_RS11635 PF00694 Aconitase C-terminal domain CFK40_RS11640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS11640 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS11640 PF00989 PAS fold CFK40_RS11640 PF08447 PAS fold CFK40_RS11645 PF11084 Protein of unknown function (DUF2621) CFK40_RS11650 PF07301 Protein of unknown function (DUF1453) CFK40_RS11655 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CFK40_RS11660 PF02683 Cytochrome C biogenesis protein transmembrane region CFK40_RS11665 PF03672 Uncharacterised protein family (UPF0154) CFK40_RS11675 PF00456 Transketolase, thiamine diphosphate binding domain CFK40_RS11675 PF02780 Transketolase, C-terminal domain CFK40_RS11675 PF02779 Transketolase, pyrimidine binding domain CFK40_RS11680 PF05979 Bacterial protein of unknown function (DUF896) CFK40_RS11685 PF00239 Resolvase, N terminal domain CFK40_RS11690 PF00717 Peptidase S24-like CFK40_RS11690 PF01726 LexA DNA binding domain CFK40_RS11705 PF05163 DinB family CFK40_RS11710 PF13302 Acetyltransferase (GNAT) domain CFK40_RS11725 PF05163 DinB family CFK40_RS11730 PF07454 Stage II sporulation protein P (SpoIIP) CFK40_RS11755 PF02796 Helix-turn-helix domain of resolvase CFK40_RS11755 PF00239 Resolvase, N terminal domain CFK40_RS11775 PF02600 Disulfide bond formation protein DsbB CFK40_RS11780 PF13462 Thioredoxin CFK40_RS11785 PF01022 Bacterial regulatory protein, arsR family CFK40_RS11790 PF00403 Heavy-metal-associated domain CFK40_RS11795 PF00266 Aminotransferase class-V CFK40_RS11800 PF02929 Beta galactosidase small chain CFK40_RS11800 PF16353 Domain of unknown function(DUF4981) CFK40_RS11800 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CFK40_RS11800 PF02837 Glycosyl hydrolases family 2, sugar binding domain CFK40_RS11800 PF00703 Glycosyl hydrolases family 2 CFK40_RS11805 PF00288 GHMP kinases N terminal domain CFK40_RS11805 PF08544 GHMP kinases C terminal CFK40_RS11805 PF10509 Galactokinase galactose-binding signature CFK40_RS11820 PF00480 ROK family CFK40_RS11830 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS11830 PF07702 UTRA domain CFK40_RS11845 PF02899 Phage integrase, N-terminal SAM-like domain CFK40_RS11845 PF00589 Phage integrase family CFK40_RS11850 PF03951 Glutamine synthetase, beta-Grasp domain CFK40_RS11850 PF00120 Glutamine synthetase, catalytic domain CFK40_RS11855 PF13411 MerR HTH family regulatory protein CFK40_RS11860 PF06838 Methionine gamma-lyase CFK40_RS11865 PF13167 GTP-binding GTPase N-terminal CFK40_RS11865 PF01926 50S ribosome-binding GTPase CFK40_RS11865 PF16360 GTP-binding GTPase Middle Region CFK40_RS11870 PF17866 AAA lid domain CFK40_RS11870 PF00004 ATPase family associated with various cellular activities (AAA) CFK40_RS11875 PF17209 Hfq protein CFK40_RS11885 PF01119 DNA mismatch repair protein, C-terminal domain CFK40_RS11885 PF08676 MutL C terminal dimerisation domain CFK40_RS11890 PF01624 MutS domain I CFK40_RS11890 PF05188 MutS domain II CFK40_RS11890 PF05192 MutS domain III CFK40_RS11890 PF05190 MutS family domain IV CFK40_RS11890 PF00488 MutS domain V CFK40_RS11895 PF10628 Outer spore coat protein E (CotE) CFK40_RS11900 PF06133 Control of competence regulator ComK, YlbF/YmcA CFK40_RS11905 PF00919 Uncharacterized protein family UPF0004 CFK40_RS11905 PF04055 Radical SAM superfamily CFK40_RS11905 PF01938 TRAM domain CFK40_RS11910 PF04232 Stage V sporulation protein S (SpoVS) CFK40_RS11915 PF13277 YmdB-like protein CFK40_RS11920 PF01966 HD domain CFK40_RS11920 PF00013 KH domain CFK40_RS11920 PF12072 Domain of unknown function (DUF3552) CFK40_RS11925 PF00154 recA bacterial DNA recombination protein CFK40_RS11930 PF00994 Probable molybdopterin binding domain CFK40_RS11930 PF18146 Damage-inducible protein CinA KH domain CFK40_RS11930 PF02464 Competence-damaged protein CFK40_RS11935 PF01066 CDP-alcohol phosphatidyltransferase CFK40_RS11940 PF13464 Domain of unknown function (DUF4115) CFK40_RS11945 PF11868 Protein of unknown function (DUF3388) CFK40_RS11950 PF11588 Protein of unknown function (DUF3243) CFK40_RS11960 PF00675 Insulinase (Peptidase family M16) CFK40_RS11960 PF05193 Peptidase M16 inactive domain CFK40_RS11965 PF05193 Peptidase M16 inactive domain CFK40_RS11970 PF02653 Branched-chain amino acid transport system / permease component CFK40_RS11975 PF02653 Branched-chain amino acid transport system / permease component CFK40_RS11980 PF00005 ABC transporter CFK40_RS11985 PF02608 ABC transporter substrate-binding protein PnrA-like CFK40_RS11990 PF07702 UTRA domain CFK40_RS11990 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS11995 PF09397 Ftsk gamma domain CFK40_RS11995 PF01580 FtsK/SpoIIIE family CFK40_RS11995 PF17854 FtsK alpha domain CFK40_RS12005 PF00574 Clp protease CFK40_RS12010 PF00701 Dihydrodipicolinate synthetase family CFK40_RS12015 PF00696 Amino acid kinase family CFK40_RS12015 PF13840 ACT domain CFK40_RS12020 PF02441 Flavoprotein CFK40_RS12025 PF16924 Dipicolinate synthase subunit A N-terminal domain CFK40_RS12025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFK40_RS12030 PF05239 PRC-barrel domain CFK40_RS12035 PF05193 Peptidase M16 inactive domain CFK40_RS12035 PF00675 Insulinase (Peptidase family M16) CFK40_RS12040 PF01522 Polysaccharide deacetylase CFK40_RS12045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CFK40_RS12045 PF01138 3' exoribonuclease family, domain 1 CFK40_RS12045 PF03725 3' exoribonuclease family, domain 2 CFK40_RS12045 PF00575 S1 RNA binding domain CFK40_RS12045 PF00013 KH domain CFK40_RS12050 PF00312 Ribosomal protein S15 CFK40_RS12055 PF01687 Riboflavin kinase CFK40_RS12055 PF06574 FAD synthetase CFK40_RS12060 PF01509 TruB family pseudouridylate synthase (N terminal domain) CFK40_RS12060 PF16198 tRNA pseudouridylate synthase B C-terminal domain CFK40_RS12065 PF02033 Ribosome-binding factor A CFK40_RS12070 PF04456 Protein of unknown function (DUF503) CFK40_RS12075 PF11987 Translation-initiation factor 2 CFK40_RS12075 PF00009 Elongation factor Tu GTP binding domain CFK40_RS12075 PF04760 Translation initiation factor IF-2, N-terminal region CFK40_RS12085 PF04296 Protein of unknown function (DUF448) CFK40_RS12090 PF13184 NusA-like KH domain CFK40_RS12090 PF08529 NusA N-terminal domain CFK40_RS12090 PF00575 S1 RNA binding domain CFK40_RS12095 PF17384 RimP C-terminal SH3 domain CFK40_RS12095 PF02576 RimP N-terminal domain CFK40_RS12100 PF14480 DNA polymerase III polC-type N-terminus I CFK40_RS12100 PF02811 PHP domain CFK40_RS12100 PF14579 Helix-hairpin-helix motif CFK40_RS12100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFK40_RS12100 PF11490 DNA polymerase III polC-type N-terminus II CFK40_RS12100 PF00929 Exonuclease CFK40_RS12100 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFK40_RS12100 PF01336 OB-fold nucleic acid binding domain CFK40_RS12105 PF02163 Peptidase family M50 CFK40_RS12105 PF17820 PDZ domain CFK40_RS12115 PF01255 Putative undecaprenyl diphosphate synthase CFK40_RS12120 PF01765 Ribosome recycling factor CFK40_RS12125 PF00696 Amino acid kinase family CFK40_RS12130 PF00889 Elongation factor TS CFK40_RS12135 PF00318 Ribosomal protein S2 CFK40_RS12145 PF04545 Sigma-70, region 4 CFK40_RS12145 PF04539 Sigma-70 region 3 CFK40_RS12145 PF04542 Sigma-70 region 2 CFK40_RS12150 PF01584 CheW-like domain CFK40_RS12155 PF07194 P2 response regulator binding domain CFK40_RS12155 PF01584 CheW-like domain CFK40_RS12155 PF02895 Signal transducing histidine kinase, homodimeric domain CFK40_RS12155 PF01627 Hpt domain CFK40_RS12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS12160 PF10609 NUBPL iron-transfer P-loop NTPase CFK40_RS12165 PF00448 SRP54-type protein, GTPase domain CFK40_RS12170 PF00771 FHIPEP family CFK40_RS12175 PF01312 FlhB HrpN YscU SpaS Family CFK40_RS12180 PF01311 Bacterial export proteins, family 1 CFK40_RS12185 PF01313 Bacterial export proteins, family 3 CFK40_RS12190 PF00813 FliP family CFK40_RS12195 PF04347 Flagellar biosynthesis protein, FliO CFK40_RS12200 PF00072 Response regulator receiver domain CFK40_RS12205 PF04509 CheC-like family CFK40_RS12205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFK40_RS12210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CFK40_RS12210 PF02154 Flagellar motor switch protein FliM CFK40_RS12215 PF03748 Flagellar basal body-associated protein FliL CFK40_RS12220 PF06289 Flagellar and Swarming motility proteins CFK40_RS12225 PF00460 Flagella basal body rod protein CFK40_RS12225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFK40_RS12235 PF03963 Flagellar hook capping protein - N-terminal region CFK40_RS12255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFK40_RS12255 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFK40_RS12255 PF18269 T3SS EscN ATPase C-terminal domain CFK40_RS12260 PF02108 Flagellar assembly protein FliH CFK40_RS12265 PF14841 FliG middle domain CFK40_RS12265 PF01706 FliG C-terminal domain CFK40_RS12265 PF14842 FliG N-terminal domain CFK40_RS12270 PF08345 Flagellar M-ring protein C-terminal CFK40_RS12270 PF01514 Secretory protein of YscJ/FliF family CFK40_RS12275 PF02049 Flagellar hook-basal body complex protein FliE CFK40_RS12280 PF00460 Flagella basal body rod protein CFK40_RS12280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CFK40_RS12285 PF00460 Flagella basal body rod protein CFK40_RS12290 PF06018 CodY GAF-like domain CFK40_RS12290 PF08222 CodY helix-turn-helix domain CFK40_RS12295 PF00004 ATPase family associated with various cellular activities (AAA) CFK40_RS12295 PF10431 C-terminal, D2-small domain, of ClpB protein CFK40_RS12295 PF07724 AAA domain (Cdc48 subfamily) CFK40_RS12300 PF00227 Proteasome subunit CFK40_RS12305 PF02899 Phage integrase, N-terminal SAM-like domain CFK40_RS12305 PF00589 Phage integrase family CFK40_RS12315 PF01131 DNA topoisomerase CFK40_RS12315 PF01751 Toprim domain CFK40_RS12315 PF01396 Topoisomerase DNA binding C4 zinc finger CFK40_RS12320 PF02481 DNA recombination-mediator protein A CFK40_RS12325 PF02629 CoA binding domain CFK40_RS12325 PF00549 CoA-ligase CFK40_RS12330 PF08442 ATP-grasp domain CFK40_RS12330 PF00549 CoA-ligase CFK40_RS12335 PF01312 FlhB HrpN YscU SpaS Family CFK40_RS12345 PF01351 Ribonuclease HII CFK40_RS12350 PF01926 50S ribosome-binding GTPase CFK40_RS12355 PF10502 Signal peptidase, peptidase S26 CFK40_RS12360 PF01245 Ribosomal protein L19 CFK40_RS12365 PF01746 tRNA (Guanine-1)-methyltransferase CFK40_RS12370 PF01782 RimM N-terminal domain CFK40_RS12370 PF05239 PRC-barrel domain CFK40_RS12375 PF11068 YlqD protein CFK40_RS12385 PF00886 Ribosomal protein S16 CFK40_RS12390 PF00448 SRP54-type protein, GTPase domain CFK40_RS12390 PF02978 Signal peptide binding domain CFK40_RS12390 PF02881 SRP54-type protein, helical bundle domain CFK40_RS12395 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CFK40_RS12400 PF00448 SRP54-type protein, GTPase domain CFK40_RS12400 PF02881 SRP54-type protein, helical bundle domain CFK40_RS12405 PF06470 SMC proteins Flexible Hinge Domain CFK40_RS12405 PF02463 RecF/RecN/SMC N terminal domain CFK40_RS12410 PF07561 Domain of Unknown Function (DUF1540) CFK40_RS12415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_RS12415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFK40_RS12425 PF04183 IucA / IucC family CFK40_RS12425 PF06276 Ferric iron reductase FhuF-like transporter CFK40_RS12430 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CFK40_RS12440 PF04183 IucA / IucC family CFK40_RS12440 PF06276 Ferric iron reductase FhuF-like transporter CFK40_RS12445 PF00282 Pyridoxal-dependent decarboxylase conserved domain CFK40_RS12450 PF00202 Aminotransferase class-III CFK40_RS12455 PF03845 Spore germination protein CFK40_RS12465 PF05504 Spore germination B3/ GerAC like, C-terminal CFK40_RS12475 PF03323 Bacillus/Clostridium GerA spore germination protein CFK40_RS12485 PF01266 FAD dependent oxidoreductase CFK40_RS12495 PF03466 LysR substrate binding domain CFK40_RS12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS12500 PF00107 Zinc-binding dehydrogenase CFK40_RS12500 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS12505 PF03928 Haem-degrading CFK40_RS12510 PF06569 Protein of unknown function (DUF1128) CFK40_RS12515 PF00035 Double-stranded RNA binding motif CFK40_RS12515 PF14622 Ribonuclease-III-like CFK40_RS12520 PF00550 Phosphopantetheine attachment site CFK40_RS12530 PF00698 Acyl transferase domain CFK40_RS12535 PF02504 Fatty acid synthesis protein CFK40_RS12545 PF00271 Helicase conserved C-terminal domain CFK40_RS12545 PF17191 RecG wedge domain CFK40_RS12545 PF00270 DEAD/DEAH box helicase CFK40_RS12550 PF03313 Serine dehydratase alpha chain CFK40_RS12555 PF03315 Serine dehydratase beta chain CFK40_RS12555 PF01842 ACT domain CFK40_RS12565 PF12146 Serine aminopeptidase, S33 CFK40_RS12605 PF00860 Permease family CFK40_RS12615 PF01925 Sulfite exporter TauE/SafE CFK40_RS12620 PF03466 LysR substrate binding domain CFK40_RS12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS12630 PF00155 Aminotransferase class I and II CFK40_RS12635 PF00753 Metallo-beta-lactamase superfamily CFK40_RS12640 PF03358 NADPH-dependent FMN reductase CFK40_RS12650 PF01638 HxlR-like helix-turn-helix CFK40_RS12655 PF06628 Catalase-related immune-responsive CFK40_RS12655 PF00199 Catalase CFK40_RS12670 PF00042 Globin CFK40_RS12670 PF00175 Oxidoreductase NAD-binding domain CFK40_RS12670 PF00970 Oxidoreductase FAD-binding domain CFK40_RS12675 PF01476 LysM domain CFK40_RS12675 PF06725 3D domain CFK40_RS12680 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS12685 PF00274 Fructose-bisphosphate aldolase class-I CFK40_RS12695 PF03061 Thioesterase superfamily CFK40_RS12700 PF13684 Dihydroxyacetone kinase family CFK40_RS12700 PF02734 DAK2 domain CFK40_RS12705 PF03780 Asp23 family, cell envelope-related function CFK40_RS12710 PF00830 Ribosomal L28 family CFK40_RS12715 PF08183 Stage V sporulation protein family CFK40_RS12720 PF04263 Thiamin pyrophosphokinase, catalytic domain CFK40_RS12720 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CFK40_RS12725 PF00834 Ribulose-phosphate 3 epimerase family CFK40_RS12730 PF16745 RsgA N-terminal domain CFK40_RS12730 PF03193 RsgA GTPase CFK40_RS12735 PF03793 PASTA domain CFK40_RS12735 PF00069 Protein kinase domain CFK40_RS12745 PF01029 NusB family CFK40_RS12745 PF01189 16S rRNA methyltransferase RsmB/F CFK40_RS12750 PF00551 Formyl transferase CFK40_RS12750 PF02911 Formyl transferase, C-terminal domain CFK40_RS12755 PF17764 3′ DNA-binding domain (3′BD) CFK40_RS12755 PF04851 Type III restriction enzyme, res subunit CFK40_RS12755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CFK40_RS12755 PF18074 Primosomal protein N C-terminal domain CFK40_RS12755 PF00271 Helicase conserved C-terminal domain CFK40_RS12760 PF04127 DNA / pantothenate metabolism flavoprotein CFK40_RS12760 PF02441 Flavoprotein CFK40_RS12765 PF01192 RNA polymerase Rpb6 CFK40_RS12770 PF04025 Domain of unknown function (DUF370) CFK40_RS12775 PF00689 Cation transporting ATPase, C-terminus CFK40_RS12775 PF00690 Cation transporter/ATPase, N-terminus CFK40_RS12780 PF05670 NFACT protein RNA binding domain CFK40_RS12785 PF02566 OsmC-like protein CFK40_RS12790 PF03466 LysR substrate binding domain CFK40_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS12795 PF08241 Methyltransferase domain CFK40_RS12800 PF00156 Phosphoribosyl transferase domain CFK40_RS12805 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFK40_RS12810 PF01180 Dihydroorotate dehydrogenase CFK40_RS12815 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CFK40_RS12815 PF00970 Oxidoreductase FAD-binding domain CFK40_RS12820 PF02142 MGS-like domain CFK40_RS12820 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFK40_RS12820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFK40_RS12825 PF00117 Glutamine amidotransferase class-I CFK40_RS12825 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CFK40_RS12830 PF01979 Amidohydrolase family CFK40_RS12835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFK40_RS12835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFK40_RS12840 PF00156 Phosphoribosyl transferase domain CFK40_RS12845 PF00849 RNA pseudouridylate synthase CFK40_RS12845 PF01479 S4 domain CFK40_RS12850 PF01252 Signal peptidase (SPase) II CFK40_RS12855 PF00133 tRNA synthetases class I (I, L, M and V) CFK40_RS12855 PF06827 Zinc finger found in FPG and IleRS CFK40_RS12855 PF08264 Anticodon-binding domain of tRNA CFK40_RS12860 PF05103 DivIVA protein CFK40_RS12865 PF01479 S4 domain CFK40_RS12865 PF17774 Putative RNA-binding domain in YlmH CFK40_RS12870 PF02325 YGGT family CFK40_RS12875 PF04472 Cell division protein SepF CFK40_RS12880 PF01168 Alanine racemase, N-terminal domain CFK40_RS12885 PF02578 Multi-copper polyphenol oxidoreductase laccase CFK40_RS12890 PF05239 PRC-barrel domain CFK40_RS12895 PF04539 Sigma-70 region 3 CFK40_RS12895 PF04542 Sigma-70 region 2 CFK40_RS12895 PF04545 Sigma-70, region 4 CFK40_RS12900 PF04545 Sigma-70, region 4 CFK40_RS12900 PF04542 Sigma-70 region 2 CFK40_RS12905 PF03419 Sporulation factor SpoIIGA CFK40_RS12910 PF00091 Tubulin/FtsZ family, GTPase domain CFK40_RS12910 PF12327 FtsZ family, C-terminal domain CFK40_RS12915 PF02491 SHS2 domain inserted in FTSA CFK40_RS12920 PF08478 POTRA domain, FtsQ-type CFK40_RS12925 PF01098 Cell cycle protein CFK40_RS12930 PF08245 Mur ligase middle domain CFK40_RS12930 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS12935 PF00953 Glycosyl transferase family 4 CFK40_RS12940 PF08245 Mur ligase middle domain CFK40_RS12940 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS12940 PF01225 Mur ligase family, catalytic domain CFK40_RS12945 PF01225 Mur ligase family, catalytic domain CFK40_RS12945 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS12945 PF08245 Mur ligase middle domain CFK40_RS12950 PF03793 PASTA domain CFK40_RS12950 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS12950 PF03717 Penicillin-binding Protein dimerisation domain CFK40_RS12955 PF03717 Penicillin-binding Protein dimerisation domain CFK40_RS12955 PF03793 PASTA domain CFK40_RS12955 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS12965 PF01795 MraW methylase family CFK40_RS12970 PF02381 MraZ protein, putative antitoxin-like CFK40_RS12975 PF10079 Bacillithiol biosynthesis BshC CFK40_RS12985 PF08546 Ketopantoate reductase PanE/ApbA C terminal CFK40_RS12985 PF02558 Ketopantoate reductase PanE/ApbA CFK40_RS12990 PF13508 Acetyltransferase (GNAT) domain CFK40_RS13000 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS13005 PF01783 Ribosomal L32p protein family CFK40_RS13010 PF02620 Large ribosomal RNA subunit accumulation protein YceD CFK40_RS13015 PF05636 HIGH Nucleotidyl Transferase CFK40_RS13020 PF13180 PDZ domain CFK40_RS13020 PF05362 Lon protease (S16) C-terminal proteolytic domain CFK40_RS13025 PF07670 Nucleoside recognition CFK40_RS13030 PF01467 Cytidylyltransferase-like CFK40_RS13040 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CFK40_RS13045 PF06133 Control of competence regulator ComK, YlbF/YmcA CFK40_RS13060 PF00188 Cysteine-rich secretory protein family CFK40_RS13060 PF14504 CAP-associated N-terminal CFK40_RS13065 PF08868 YugN-like family CFK40_RS13070 PF01594 AI-2E family transporter CFK40_RS13075 PF01773 Na+ dependent nucleoside transporter N-terminus CFK40_RS13075 PF07662 Na+ dependent nucleoside transporter C-terminus CFK40_RS13085 PF04238 Protein of unknown function (DUF420) CFK40_RS13090 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CFK40_RS13095 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CFK40_RS13100 PF00510 Cytochrome c oxidase subunit III CFK40_RS13105 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFK40_RS13110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CFK40_RS13110 PF00034 Cytochrome c CFK40_RS13110 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CFK40_RS13115 PF01040 UbiA prenyltransferase family CFK40_RS13120 PF02628 Cytochrome oxidase assembly protein CFK40_RS13125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFK40_RS13125 PF02436 Conserved carboxylase domain CFK40_RS13125 PF02785 Biotin carboxylase C-terminal domain CFK40_RS13125 PF00364 Biotin-requiring enzyme CFK40_RS13125 PF00682 HMGL-like CFK40_RS13125 PF00289 Biotin carboxylase, N-terminal domain CFK40_RS13130 PF01098 Cell cycle protein CFK40_RS13135 PF07408 Protein of unknown function (DUF1507) CFK40_RS13145 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CFK40_RS13155 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CFK40_RS13165 PF00459 Inositol monophosphatase family CFK40_RS13175 PF06335 Protein of unknown function (DUF1054) CFK40_RS13180 PF05256 Uncharacterised protein family (UPF0223) CFK40_RS13185 PF03060 Nitronate monooxygenase CFK40_RS13190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CFK40_RS13190 PF01276 Orn/Lys/Arg decarboxylase, major domain CFK40_RS13195 PF13790 SR1 protein CFK40_RS13200 PF01522 Polysaccharide deacetylase CFK40_RS13200 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CFK40_RS13205 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS13210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFK40_RS13215 PF02817 e3 binding domain CFK40_RS13215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFK40_RS13215 PF00364 Biotin-requiring enzyme CFK40_RS13220 PF02779 Transketolase, pyrimidine binding domain CFK40_RS13220 PF02780 Transketolase, C-terminal domain CFK40_RS13225 PF00676 Dehydrogenase E1 component CFK40_RS13235 PF01327 Polypeptide deformylase CFK40_RS13240 PF07288 Protein of unknown function (DUF1447) CFK40_RS13245 PF00753 Metallo-beta-lactamase superfamily CFK40_RS13245 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CFK40_RS13245 PF17770 Ribonuclease J C-terminal domain CFK40_RS13250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS13250 PF00205 Thiamine pyrophosphate enzyme, central domain CFK40_RS13250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS13255 PF02080 TrkA-C domain CFK40_RS13255 PF02254 TrkA-N domain CFK40_RS13260 PF02322 Cytochrome bd terminal oxidase subunit II CFK40_RS13265 PF00664 ABC transporter transmembrane region CFK40_RS13265 PF00005 ABC transporter CFK40_RS13270 PF00005 ABC transporter CFK40_RS13270 PF00664 ABC transporter transmembrane region CFK40_RS13275 PF00578 AhpC/TSA family CFK40_RS13280 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFK40_RS13280 PF00578 AhpC/TSA family CFK40_RS13285 PF00924 Mechanosensitive ion channel CFK40_RS13290 PF03698 Uncharacterised protein family (UPF0180) CFK40_RS13295 PF07690 Major Facilitator Superfamily CFK40_RS13305 PF00149 Calcineurin-like phosphoesterase CFK40_RS13305 PF10518 TAT (twin-arginine translocation) pathway signal sequence CFK40_RS13310 PF02630 SCO1/SenC CFK40_RS13315 PF14177 YkyB-like protein CFK40_RS13350 PF10502 Signal peptidase, peptidase S26 CFK40_RS13360 PF13180 PDZ domain CFK40_RS13370 PF03707 Bacterial signalling protein N terminal repeat CFK40_RS13370 PF00563 EAL domain CFK40_RS13370 PF00990 Diguanylate cyclase, GGDEF domain CFK40_RS13375 PF02386 Cation transport protein CFK40_RS13380 PF14183 YwpF-like protein CFK40_RS13385 PF00994 Probable molybdopterin binding domain CFK40_RS13385 PF03454 MoeA C-terminal region (domain IV) CFK40_RS13385 PF03453 MoeA N-terminal region (domain I and II) CFK40_RS13405 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CFK40_RS13410 PF07451 Stage V sporulation protein AD (SpoVAD) CFK40_RS13415 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CFK40_RS13425 PF04239 Protein of unknown function (DUF421) CFK40_RS13430 PF00565 Staphylococcal nuclease homologue CFK40_RS13435 PF03323 Bacillus/Clostridium GerA spore germination protein CFK40_RS13445 PF05504 Spore germination B3/ GerAC like, C-terminal CFK40_RS13450 PF00107 Zinc-binding dehydrogenase CFK40_RS13450 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS13455 PF02374 Anion-transporting ATPase CFK40_RS13465 PF13722 5TM C-terminal transporter carbon starvation CstA CFK40_RS13465 PF02554 Carbon starvation protein CstA CFK40_RS13470 PF07849 Protein of unknown function (DUF1641) CFK40_RS13475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFK40_RS13475 PF00384 Molybdopterin oxidoreductase CFK40_RS13475 PF01568 Molydopterin dinucleotide binding domain CFK40_RS13475 PF12838 4Fe-4S dicluster domain CFK40_RS13475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFK40_RS13480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFK40_RS13480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFK40_RS13490 PF09515 Thiamine transporter protein (Thia_YuaJ) CFK40_RS13500 PF01520 N-acetylmuramoyl-L-alanine amidase CFK40_RS13500 PF11741 AMIN domain CFK40_RS13510 PF04264 YceI-like domain CFK40_RS13515 PF00330 Aconitase family (aconitate hydratase) CFK40_RS13520 PF01032 FecCD transport family CFK40_RS13525 PF01497 Periplasmic binding protein CFK40_RS13545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS13555 PF10710 Protein of unknown function (DUF2512) CFK40_RS13560 PF00106 short chain dehydrogenase CFK40_RS13565 PF00501 AMP-binding enzyme CFK40_RS13565 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS13590 PF01751 Toprim domain CFK40_RS13590 PF01131 DNA topoisomerase CFK40_RS13595 PF00149 Calcineurin-like phosphoesterase CFK40_RS13605 PF00664 ABC transporter transmembrane region CFK40_RS13605 PF00005 ABC transporter CFK40_RS13635 PF00535 Glycosyl transferase family 2 CFK40_RS13640 PF00664 ABC transporter transmembrane region CFK40_RS13640 PF00005 ABC transporter CFK40_RS13650 PF04230 Polysaccharide pyruvyl transferase CFK40_RS13660 PF13439 Glycosyltransferase Family 4 CFK40_RS13660 PF00534 Glycosyl transferases group 1 CFK40_RS13670 PF00535 Glycosyl transferase family 2 CFK40_RS13670 PF01501 Glycosyl transferase family 8 CFK40_RS13680 PF13439 Glycosyltransferase Family 4 CFK40_RS13680 PF00534 Glycosyl transferases group 1 CFK40_RS13685 PF01381 Helix-turn-helix CFK40_RS13685 PF08671 Anti-repressor SinI CFK40_RS13690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFK40_RS13695 PF17836 PglD N-terminal domain CFK40_RS13695 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS13700 PF02397 Bacterial sugar transferase CFK40_RS13705 PF16363 GDP-mannose 4,6 dehydratase CFK40_RS13715 PF00535 Glycosyl transferase family 2 CFK40_RS13715 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CFK40_RS13720 PF00534 Glycosyl transferases group 1 CFK40_RS13720 PF13439 Glycosyltransferase Family 4 CFK40_RS13725 PF13439 Glycosyltransferase Family 4 CFK40_RS13725 PF00534 Glycosyl transferases group 1 CFK40_RS13730 PF00483 Nucleotidyl transferase CFK40_RS13735 PF02719 Polysaccharide biosynthesis protein CFK40_RS13740 PF13614 AAA domain CFK40_RS13745 PF13807 G-rich domain on putative tyrosine kinase CFK40_RS13745 PF02706 Chain length determinant protein CFK40_RS13750 PF00271 Helicase conserved C-terminal domain CFK40_RS13750 PF00270 DEAD/DEAH box helicase CFK40_RS13760 PF01593 Flavin containing amine oxidoreductase CFK40_RS13765 PF00860 Permease family CFK40_RS13770 PF14158 YndJ-like protein CFK40_RS13775 PF13761 Domain of unknown function (DUF4166) CFK40_RS13785 PF01842 ACT domain CFK40_RS13785 PF00800 Prephenate dehydratase CFK40_RS13790 PF10710 Protein of unknown function (DUF2512) CFK40_RS13795 PF02416 mttA/Hcf106 family CFK40_RS13800 PF05199 GMC oxidoreductase CFK40_RS13800 PF00732 GMC oxidoreductase CFK40_RS13815 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CFK40_RS13850 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS13850 PF13291 ACT domain CFK40_RS13855 PF00694 Aconitase C-terminal domain CFK40_RS13860 PF00330 Aconitase family (aconitate hydratase) CFK40_RS13865 PF00180 Isocitrate/isopropylmalate dehydrogenase CFK40_RS13870 PF08502 LeuA allosteric (dimerisation) domain CFK40_RS13870 PF00682 HMGL-like CFK40_RS13875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CFK40_RS13875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CFK40_RS13880 PF01842 ACT domain CFK40_RS13880 PF10369 Small subunit of acetolactate synthase CFK40_RS13885 PF00205 Thiamine pyrophosphate enzyme, central domain CFK40_RS13885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS13885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS13890 PF00288 GHMP kinases N terminal domain CFK40_RS13890 PF08544 GHMP kinases C terminal CFK40_RS13895 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS13900 PF00742 Homoserine dehydrogenase CFK40_RS13900 PF03447 Homoserine dehydrogenase, NAD binding domain CFK40_RS13900 PF01842 ACT domain CFK40_RS13905 PF00696 Amino acid kinase family CFK40_RS13905 PF13840 ACT domain CFK40_RS13910 PF00920 Dehydratase family CFK40_RS13915 PF00266 Aminotransferase class-V CFK40_RS13920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFK40_RS13920 PF01842 ACT domain CFK40_RS13920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFK40_RS13925 PF13419 Haloacid dehalogenase-like hydrolase CFK40_RS13930 PF02554 Carbon starvation protein CstA CFK40_RS13935 PF01063 Amino-transferase class IV CFK40_RS13945 PF15975 Flotillin CFK40_RS13945 PF01145 SPFH domain / Band 7 family CFK40_RS13965 PF00664 ABC transporter transmembrane region CFK40_RS13965 PF00005 ABC transporter CFK40_RS13970 PF00005 ABC transporter CFK40_RS13970 PF00664 ABC transporter transmembrane region CFK40_RS13975 PF01654 Cytochrome bd terminal oxidase subunit I CFK40_RS13985 PF03553 Na+/H+ antiporter family CFK40_RS13990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFK40_RS13990 PF13378 Enolase C-terminal domain-like CFK40_RS14000 PF00011 Hsp20/alpha crystallin family CFK40_RS14025 PF14031 Putative serine dehydratase domain CFK40_RS14025 PF01168 Alanine racemase, N-terminal domain CFK40_RS14030 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS14045 PF00375 Sodium:dicarboxylate symporter family CFK40_RS14050 PF01979 Amidohydrolase family CFK40_RS14060 PF02153 Prephenate dehydrogenase CFK40_RS14060 PF01842 ACT domain CFK40_RS14065 PF00155 Aminotransferase class I and II CFK40_RS14070 PF01817 Chorismate mutase type II CFK40_RS14070 PF00793 DAHP synthetase I family CFK40_RS14075 PF00155 Aminotransferase class I and II CFK40_RS14080 PF00696 Amino acid kinase family CFK40_RS14080 PF13840 ACT domain CFK40_RS14080 PF01842 ACT domain CFK40_RS14085 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFK40_RS14085 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFK40_RS14090 PF00701 Dihydrodipicolinate synthetase family CFK40_RS14095 PF05173 Dihydrodipicolinate reductase, C-terminus CFK40_RS14095 PF01113 Dihydrodipicolinate reductase, N-terminus CFK40_RS14100 PF14602 Hexapeptide repeat of succinyl-transferase CFK40_RS14100 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS14100 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CFK40_RS14110 PF07687 Peptidase dimerisation domain CFK40_RS14110 PF01546 Peptidase family M20/M25/M40 CFK40_RS14115 PF14140 YpzI-like protein CFK40_RS14120 PF01546 Peptidase family M20/M25/M40 CFK40_RS14120 PF07687 Peptidase dimerisation domain CFK40_RS14125 PF00171 Aldehyde dehydrogenase family CFK40_RS14160 PF04740 LXG domain of WXG superfamily CFK40_RS14160 PF14449 Pre-toxin TG CFK40_RS14160 PF14431 YwqJ-like deaminase CFK40_RS14175 PF17355 Family of unknown function (DUF5383) CFK40_RS14185 PF01580 FtsK/SpoIIIE family CFK40_RS14185 PF12538 DNA transporter CFK40_RS14190 PF10140 WXG100 protein secretion system (Wss), protein YukC CFK40_RS14195 PF08817 WXG100 protein secretion system (Wss), protein YukD CFK40_RS14200 PF06013 Proteins of 100 residues with WXG CFK40_RS14250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFK40_RS14250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS14255 PF00310 Glutamine amidotransferases class-II CFK40_RS14255 PF01645 Conserved region in glutamate synthase CFK40_RS14255 PF01493 GXGXG motif CFK40_RS14255 PF04898 Glutamate synthase central domain CFK40_RS14260 PF03466 LysR substrate binding domain CFK40_RS14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS14265 PF00296 Luciferase-like monooxygenase CFK40_RS14270 PF03358 NADPH-dependent FMN reductase CFK40_RS14275 PF01758 Sodium Bile acid symporter family CFK40_RS14280 PF04346 Ethanolamine utilisation protein, EutH CFK40_RS14285 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS14285 PF00557 Metallopeptidase family M24 CFK40_RS14290 PF00083 Sugar (and other) transporter CFK40_RS14295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS14295 PF00205 Thiamine pyrophosphate enzyme, central domain CFK40_RS14295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS14300 PF00465 Iron-containing alcohol dehydrogenase CFK40_RS14305 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS14305 PF07702 UTRA domain CFK40_RS14315 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS14345 PF00108 Thiolase, N-terminal domain CFK40_RS14345 PF02803 Thiolase, C-terminal domain CFK40_RS14350 PF00501 AMP-binding enzyme CFK40_RS14350 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS14355 PF07690 Major Facilitator Superfamily CFK40_RS14360 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS14360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS14360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS14365 PF00158 Sigma-54 interaction domain CFK40_RS14370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CFK40_RS14370 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CFK40_RS14375 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFK40_RS14380 PF00510 Cytochrome c oxidase subunit III CFK40_RS14385 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CFK40_RS14400 PF03880 DbpA RNA binding domain CFK40_RS14400 PF00271 Helicase conserved C-terminal domain CFK40_RS14400 PF00270 DEAD/DEAH box helicase CFK40_RS14420 PF01470 Pyroglutamyl peptidase CFK40_RS14430 PF04963 Sigma-54 factor, core binding domain CFK40_RS14430 PF04552 Sigma-54, DNA binding domain CFK40_RS14430 PF00309 Sigma-54 factor, Activator interacting domain (AID) CFK40_RS14435 PF02447 GntP family permease CFK40_RS14440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFK40_RS14440 PF13378 Enolase C-terminal domain-like CFK40_RS14445 PF01081 KDPG and KHG aldolase CFK40_RS14450 PF00294 pfkB family carbohydrate kinase CFK40_RS14455 PF01380 SIS domain CFK40_RS14455 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS14460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFK40_RS14460 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CFK40_RS14465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFK40_RS14465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFK40_RS14480 PF00158 Sigma-54 interaction domain CFK40_RS14480 PF02954 Bacterial regulatory protein, Fis family CFK40_RS14480 PF13426 PAS domain CFK40_RS14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS14485 PF03466 LysR substrate binding domain CFK40_RS14490 PF01810 LysE type translocator CFK40_RS14495 PF09339 IclR helix-turn-helix domain CFK40_RS14495 PF01614 Bacterial transcriptional regulator CFK40_RS14510 PF00324 Amino acid permease CFK40_RS14515 PF01546 Peptidase family M20/M25/M40 CFK40_RS14520 PF01418 Helix-turn-helix domain, rpiR family CFK40_RS14520 PF01380 SIS domain CFK40_RS14525 PF00480 ROK family CFK40_RS14530 PF02910 Fumarate reductase flavoprotein C-term CFK40_RS14530 PF00890 FAD binding domain CFK40_RS14535 PF00474 Sodium:solute symporter family CFK40_RS14540 PF00701 Dihydrodipicolinate synthetase family CFK40_RS14545 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CFK40_RS14550 PF07969 Amidohydrolase family CFK40_RS14560 PF00171 Aldehyde dehydrogenase family CFK40_RS14565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS14565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS14565 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS14570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS14570 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS14570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS14590 PF13452 N-terminal half of MaoC dehydratase CFK40_RS14595 PF13380 CoA binding domain CFK40_RS14595 PF13607 Succinyl-CoA ligase like flavodoxin domain CFK40_RS14630 PF00805 Pentapeptide repeats (8 copies) CFK40_RS14650 PF03553 Na+/H+ antiporter family CFK40_RS14655 PF03553 Na+/H+ antiporter family CFK40_RS14660 PF00478 IMP dehydrogenase / GMP reductase domain CFK40_RS14680 PF03553 Na+/H+ antiporter family CFK40_RS14685 PF00206 Lyase CFK40_RS14685 PF14698 Argininosuccinate lyase C-terminal CFK40_RS14690 PF00171 Aldehyde dehydrogenase family CFK40_RS14695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS14695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS14695 PF00205 Thiamine pyrophosphate enzyme, central domain CFK40_RS14700 PF04229 GrpB protein CFK40_RS14700 PF13673 Acetyltransferase (GNAT) domain CFK40_RS14720 PF13726 Na+-H+ antiporter family CFK40_RS14720 PF03553 Na+/H+ antiporter family CFK40_RS14725 PF00221 Aromatic amino acid lyase CFK40_RS14730 PF07670 Nucleoside recognition CFK40_RS14735 PF07687 Peptidase dimerisation domain CFK40_RS14735 PF01546 Peptidase family M20/M25/M40 CFK40_RS14740 PF01979 Amidohydrolase family CFK40_RS14745 PF17391 Urocanase N-terminal domain CFK40_RS14745 PF01175 Urocanase Rossmann-like domain CFK40_RS14745 PF17392 Urocanase C-terminal domain CFK40_RS14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS14750 PF03466 LysR substrate binding domain CFK40_RS14755 PF12850 Calcineurin-like phosphoesterase superfamily domain CFK40_RS14765 PF07728 AAA domain (dynein-related subfamily) CFK40_RS14775 PF00092 von Willebrand factor type A domain CFK40_RS14780 PF00390 Malic enzyme, N-terminal domain CFK40_RS14780 PF03949 Malic enzyme, NAD binding domain CFK40_RS14785 PF10415 Fumarase C C-terminus CFK40_RS14785 PF00206 Lyase CFK40_RS14790 PF09587 Bacterial capsule synthesis protein PGA_cap CFK40_RS14795 PF00881 Nitroreductase family CFK40_RS14800 PF01979 Amidohydrolase family CFK40_RS14805 PF01180 Dihydroorotate dehydrogenase CFK40_RS14810 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CFK40_RS14810 PF00175 Oxidoreductase NAD-binding domain CFK40_RS14810 PF00970 Oxidoreductase FAD-binding domain CFK40_RS14815 PF07687 Peptidase dimerisation domain CFK40_RS14815 PF01546 Peptidase family M20/M25/M40 CFK40_RS14820 PF07905 Purine catabolism regulatory protein-like family CFK40_RS14820 PF13556 PucR C-terminal helix-turn-helix domain CFK40_RS14820 PF17853 GGDEF-like domain CFK40_RS14825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFK40_RS14830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFK40_RS14835 PF03480 Bacterial extracellular solute-binding protein, family 7 CFK40_RS14850 PF01476 LysM domain CFK40_RS14850 PF00877 NlpC/P60 family CFK40_RS14860 PF07969 Amidohydrolase family CFK40_RS14865 PF07969 Amidohydrolase family CFK40_RS14870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS14875 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS14875 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS14880 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS14885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS14885 PF00005 ABC transporter CFK40_RS14890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS14890 PF00005 ABC transporter CFK40_RS14895 PF06580 Histidine kinase CFK40_RS14895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS14895 PF07694 5TMR of 5TMR-LYT CFK40_RS14900 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS14900 PF00072 Response regulator receiver domain CFK40_RS14910 PF00795 Carbon-nitrogen hydrolase CFK40_RS14910 PF00583 Acetyltransferase (GNAT) family CFK40_RS14915 PF00171 Aldehyde dehydrogenase family CFK40_RS14925 PF00202 Aminotransferase class-III CFK40_RS14930 PF02954 Bacterial regulatory protein, Fis family CFK40_RS14930 PF00989 PAS fold CFK40_RS14930 PF00158 Sigma-54 interaction domain CFK40_RS14935 PF00324 Amino acid permease CFK40_RS14940 PF00850 Histone deacetylase domain CFK40_RS14945 PF00324 Amino acid permease CFK40_RS14950 PF00324 Amino acid permease CFK40_RS14955 PF04371 Porphyromonas-type peptidyl-arginine deiminase CFK40_RS14960 PF00171 Aldehyde dehydrogenase family CFK40_RS14965 PF00202 Aminotransferase class-III CFK40_RS14970 PF01546 Peptidase family M20/M25/M40 CFK40_RS14970 PF07687 Peptidase dimerisation domain CFK40_RS14975 PF00158 Sigma-54 interaction domain CFK40_RS14980 PF04371 Porphyromonas-type peptidyl-arginine deiminase CFK40_RS14985 PF00171 Aldehyde dehydrogenase family CFK40_RS14990 PF00202 Aminotransferase class-III CFK40_RS14995 PF00155 Aminotransferase class I and II CFK40_RS14995 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS15000 PF02515 CoA-transferase family III CFK40_RS15005 PF00108 Thiolase, N-terminal domain CFK40_RS15005 PF02803 Thiolase, C-terminal domain CFK40_RS15010 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS15010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS15010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS15015 PF00106 short chain dehydrogenase CFK40_RS15020 PF08359 YsiA-like protein, C-terminal region CFK40_RS15020 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS15025 PF00884 Sulfatase CFK40_RS15025 PF16347 Domain of unknown function (DUF4976) CFK40_RS15030 PF03781 Sulfatase-modifying factor enzyme 1 CFK40_RS15035 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CFK40_RS15040 PF14310 Fibronectin type III-like domain CFK40_RS15040 PF01915 Glycosyl hydrolase family 3 C-terminal domain CFK40_RS15040 PF00933 Glycosyl hydrolase family 3 N terminal domain CFK40_RS15050 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS15055 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS15065 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS15080 PF00375 Sodium:dicarboxylate symporter family CFK40_RS15085 PF07650 KH domain CFK40_RS15085 PF01926 50S ribosome-binding GTPase CFK40_RS15100 PF13443 Cro/C1-type HTH DNA-binding domain CFK40_RS15105 PF01979 Amidohydrolase family CFK40_RS15105 PF13382 Adenine deaminase C-terminal domain CFK40_RS15110 PF00860 Permease family CFK40_RS15140 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CFK40_RS15140 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CFK40_RS15145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFK40_RS15155 PF01970 Tripartite tricarboxylate transporter TctA family CFK40_RS15165 PF03401 Tripartite tricarboxylate transporter family receptor CFK40_RS15170 PF03786 D-mannonate dehydratase (UxuA) CFK40_RS15175 PF00171 Aldehyde dehydrogenase family CFK40_RS15180 PF00701 Dihydrodipicolinate synthetase family CFK40_RS15185 PF07729 FCD domain CFK40_RS15185 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS15190 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS15190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFK40_RS15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS15200 PF03466 LysR substrate binding domain CFK40_RS15205 PF03737 Aldolase/RraA CFK40_RS15210 PF03616 Sodium/glutamate symporter CFK40_RS15215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFK40_RS15215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFK40_RS15225 PF00171 Aldehyde dehydrogenase family CFK40_RS15235 PF00180 Isocitrate/isopropylmalate dehydrogenase CFK40_RS15240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFK40_RS15240 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFK40_RS15245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFK40_RS15245 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFK40_RS15250 PF03480 Bacterial extracellular solute-binding protein, family 7 CFK40_RS15255 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS15255 PF07729 FCD domain CFK40_RS15265 PF04238 Protein of unknown function (DUF420) CFK40_RS15280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CFK40_RS15280 PF02837 Glycosyl hydrolases family 2, sugar binding domain CFK40_RS15280 PF00703 Glycosyl hydrolases family 2 CFK40_RS15280 PF02929 Beta galactosidase small chain CFK40_RS15280 PF16353 Domain of unknown function(DUF4981) CFK40_RS15285 PF00884 Sulfatase CFK40_RS15285 PF16347 Domain of unknown function (DUF4976) CFK40_RS15290 PF08281 Sigma-70, region 4 CFK40_RS15290 PF04542 Sigma-70 region 2 CFK40_RS15295 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS15300 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS15305 PF01547 Bacterial extracellular solute-binding protein CFK40_RS15310 PF02347 Glycine cleavage system P-protein CFK40_RS15315 PF02347 Glycine cleavage system P-protein CFK40_RS15325 PF01047 MarR family CFK40_RS15325 PF00480 ROK family CFK40_RS15340 PF13411 MerR HTH family regulatory protein CFK40_RS15345 PF01430 Hsp33 protein CFK40_RS15350 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS15350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFK40_RS15360 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS15370 PF03737 Aldolase/RraA CFK40_RS15380 PF00132 Bacterial transferase hexapeptide (six repeats) CFK40_RS15380 PF14602 Hexapeptide repeat of succinyl-transferase CFK40_RS15380 PF12464 Maltose acetyltransferase CFK40_RS15400 PF00583 Acetyltransferase (GNAT) family CFK40_RS15405 PF00092 von Willebrand factor type A domain CFK40_RS15420 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS15425 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS15430 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS15435 PF00005 ABC transporter CFK40_RS15435 PF00571 CBS domain CFK40_RS15440 PF00772 DnaB-like helicase N terminal domain CFK40_RS15440 PF03796 DnaB-like helicase C terminal domain CFK40_RS15450 PF07261 Replication initiation and membrane attachment CFK40_RS15470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFK40_RS15470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFK40_RS15480 PF00005 ABC transporter CFK40_RS15485 PF00005 ABC transporter CFK40_RS15490 PF02361 Cobalt transport protein CFK40_RS15500 PF01979 Amidohydrolase family CFK40_RS15505 PF01156 Inosine-uridine preferring nucleoside hydrolase CFK40_RS15525 PF00294 pfkB family carbohydrate kinase CFK40_RS15530 PF18010 Cry35Ab1 HTH C-terminal domain CFK40_RS15530 PF00239 Resolvase, N terminal domain CFK40_RS15535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS15540 PF07669 Eco57I restriction-modification methylase CFK40_RS15555 PF12008 Type I restriction and modification enzyme - subunit R C terminal CFK40_RS15555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CFK40_RS15555 PF18766 SWI2/SNF2 ATPase CFK40_RS15565 PF02384 N-6 DNA Methylase CFK40_RS15565 PF12161 HsdM N-terminal domain CFK40_RS15590 PF13401 AAA domain CFK40_RS15610 PF04542 Sigma-70 region 2 CFK40_RS15610 PF08281 Sigma-70, region 4 CFK40_RS15625 PF12848 ABC transporter CFK40_RS15625 PF00005 ABC transporter CFK40_RS15630 PF00005 ABC transporter CFK40_RS15635 PF01032 FecCD transport family CFK40_RS15640 PF01032 FecCD transport family CFK40_RS15650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS15655 PF00596 Class II Aldolase and Adducin N-terminal domain CFK40_RS15660 PF01979 Amidohydrolase family CFK40_RS15665 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS15665 PF07702 UTRA domain CFK40_RS15670 PF01008 Initiation factor 2 subunit family CFK40_RS15675 PF01773 Na+ dependent nucleoside transporter N-terminus CFK40_RS15675 PF07662 Na+ dependent nucleoside transporter C-terminus CFK40_RS15725 PF01266 FAD dependent oxidoreductase CFK40_RS15730 PF01266 FAD dependent oxidoreductase CFK40_RS15735 PF03553 Na+/H+ antiporter family CFK40_RS15745 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS15750 PF00557 Metallopeptidase family M24 CFK40_RS15750 PF01321 Creatinase/Prolidase N-terminal domain CFK40_RS15765 PF04143 Sulphur transport CFK40_RS15770 PF07687 Peptidase dimerisation domain CFK40_RS15770 PF01546 Peptidase family M20/M25/M40 CFK40_RS15775 PF01979 Amidohydrolase family CFK40_RS15790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS15790 PF03466 LysR substrate binding domain CFK40_RS15795 PF05145 Transition state regulatory protein AbrB CFK40_RS15805 PF03600 Citrate transporter CFK40_RS15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS15810 PF03466 LysR substrate binding domain CFK40_RS15815 PF04303 PrpF protein CFK40_RS15825 PF03061 Thioesterase superfamily CFK40_RS15830 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS15840 PF12833 Helix-turn-helix domain CFK40_RS15860 PF13443 Cro/C1-type HTH DNA-binding domain CFK40_RS15865 PF11188 Protein of unknown function (DUF2975) CFK40_RS15870 PF05675 Protein of unknown function (DUF817) CFK40_RS15875 PF11188 Protein of unknown function (DUF2975) CFK40_RS15880 PF01255 Putative undecaprenyl diphosphate synthase CFK40_RS15885 PF03965 Penicillinase repressor CFK40_RS15890 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS15890 PF05569 BlaR1 peptidase M56 CFK40_RS15905 PF12146 Serine aminopeptidase, S33 CFK40_RS15920 PF08863 YolD-like protein CFK40_RS15935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CFK40_RS15945 PF00375 Sodium:dicarboxylate symporter family CFK40_RS15950 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFK40_RS15955 PF13378 Enolase C-terminal domain-like CFK40_RS15960 PF13426 PAS domain CFK40_RS15960 PF00158 Sigma-54 interaction domain CFK40_RS15960 PF02954 Bacterial regulatory protein, Fis family CFK40_RS15970 PF01636 Phosphotransferase enzyme family CFK40_RS15980 PF04229 GrpB protein CFK40_RS15980 PF13673 Acetyltransferase (GNAT) domain CFK40_RS15995 PF09334 tRNA synthetases class I (M) CFK40_RS15995 PF08264 Anticodon-binding domain of tRNA CFK40_RS16000 PF00582 Universal stress protein family CFK40_RS16005 PF07690 Major Facilitator Superfamily CFK40_RS16020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFK40_RS16025 PF07681 DoxX CFK40_RS16035 PF13460 NAD(P)H-binding CFK40_RS16055 PF01047 MarR family CFK40_RS16060 PF00583 Acetyltransferase (GNAT) family CFK40_RS16065 PF04299 Putative FMN-binding domain CFK40_RS16080 PF01613 Flavin reductase like domain CFK40_RS16120 PF00005 ABC transporter CFK40_RS16120 PF00664 ABC transporter transmembrane region CFK40_RS16125 PF00005 ABC transporter CFK40_RS16125 PF00664 ABC transporter transmembrane region CFK40_RS16130 PF00756 Putative esterase CFK40_RS16140 PF13673 Acetyltransferase (GNAT) domain CFK40_RS16145 PF04239 Protein of unknown function (DUF421) CFK40_RS16150 PF01047 MarR family CFK40_RS16155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFK40_RS16170 PF00149 Calcineurin-like phosphoesterase CFK40_RS16180 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CFK40_RS16185 PF13411 MerR HTH family regulatory protein CFK40_RS16190 PF00571 CBS domain CFK40_RS16190 PF01595 Cyclin M transmembrane N-terminal domain CFK40_RS16190 PF03471 Transporter associated domain CFK40_RS16230 PF04239 Protein of unknown function (DUF421) CFK40_RS16235 PF10710 Protein of unknown function (DUF2512) CFK40_RS16240 PF11553 Protein of unknown function (DUF3231) CFK40_RS16245 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS16245 PF00501 AMP-binding enzyme CFK40_RS16250 PF00909 Ammonium Transporter Family CFK40_RS16255 PF00543 Nitrogen regulatory protein P-II CFK40_RS16260 PF05199 GMC oxidoreductase CFK40_RS16260 PF00732 GMC oxidoreductase CFK40_RS16265 PF13618 Gluconate 2-dehydrogenase subunit 3 CFK40_RS16290 PF01156 Inosine-uridine preferring nucleoside hydrolase CFK40_RS16295 PF01773 Na+ dependent nucleoside transporter N-terminus CFK40_RS16295 PF07662 Na+ dependent nucleoside transporter C-terminus CFK40_RS16300 PF04227 Indigoidine synthase A like protein CFK40_RS16310 PF00294 pfkB family carbohydrate kinase CFK40_RS16325 PF16242 Pyridoxamine 5'-phosphate oxidase like CFK40_RS16330 PF02627 Carboxymuconolactone decarboxylase family CFK40_RS16335 PF04070 Domain of unknown function (DUF378) CFK40_RS16345 PF11132 Transcriptional regulator protein (SplA) CFK40_RS16360 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS16360 PF18665 Tetracyclin repressor-like, C-terminal domain CFK40_RS16365 PF03176 MMPL family CFK40_RS16380 PF03129 Anticodon binding domain CFK40_RS16380 PF02824 TGS domain CFK40_RS16380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFK40_RS16380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFK40_RS16385 PF08970 Sporulation inhibitor A CFK40_RS16390 PF00106 short chain dehydrogenase CFK40_RS16395 PF11954 Domain of unknown function (DUF3471) CFK40_RS16395 PF00144 Beta-lactamase CFK40_RS16400 PF13302 Acetyltransferase (GNAT) domain CFK40_RS16415 PF01022 Bacterial regulatory protein, arsR family CFK40_RS16420 PF00884 Sulfatase CFK40_RS16430 PF02660 Glycerol-3-phosphate acyltransferase CFK40_RS16435 PF00293 NUDIX domain CFK40_RS16485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS16490 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS16495 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS16500 PF00005 ABC transporter CFK40_RS16500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS16505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS16505 PF00005 ABC transporter CFK40_RS16510 PF01769 Divalent cation transporter CFK40_RS16510 PF03448 MgtE intracellular N domain CFK40_RS16510 PF00571 CBS domain CFK40_RS16515 PF01098 Cell cycle protein CFK40_RS16520 PF00149 Calcineurin-like phosphoesterase CFK40_RS16525 PF00849 RNA pseudouridylate synthase CFK40_RS16530 PF01513 ATP-NAD kinase CFK40_RS16535 PF04607 Region found in RelA / SpoT proteins CFK40_RS16540 PF01928 CYTH domain CFK40_RS16545 PF01152 Bacterial-like globin CFK40_RS16555 PF08439 Oligopeptidase F CFK40_RS16555 PF01432 Peptidase family M3 CFK40_RS16565 PF05389 Negative regulator of genetic competence (MecA) CFK40_RS16570 PF03960 ArsC family CFK40_RS16575 PF13508 Acetyltransferase (GNAT) domain CFK40_RS16585 PF03746 LamB/YcsF family CFK40_RS16590 PF02626 Carboxyltransferase domain, subdomain A and B CFK40_RS16595 PF02682 Carboxyltransferase domain, subdomain C and D CFK40_RS16610 PF07687 Peptidase dimerisation domain CFK40_RS16610 PF01546 Peptidase family M20/M25/M40 CFK40_RS16620 PF00579 tRNA synthetases class I (W and Y) CFK40_RS16625 PF12227 Protein of unknown function (DUF3603) CFK40_RS16635 PF00109 Beta-ketoacyl synthase, N-terminal domain CFK40_RS16635 PF02801 Beta-ketoacyl synthase, C-terminal domain CFK40_RS16640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CFK40_RS16640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFK40_RS16645 PF02608 ABC transporter substrate-binding protein PnrA-like CFK40_RS16665 PF02673 Bacitracin resistance protein BacA CFK40_RS16675 PF02597 ThiS family CFK40_RS16680 PF02391 MoaE protein CFK40_RS16685 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CFK40_RS16690 PF01883 Iron-sulfur cluster assembly protein CFK40_RS16695 PF00326 Prolyl oligopeptidase family CFK40_RS16715 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CFK40_RS16715 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CFK40_RS16720 PF02645 Uncharacterised protein, DegV family COG1307 CFK40_RS16725 PF00128 Alpha amylase, catalytic domain CFK40_RS16730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS16735 PF01032 FecCD transport family CFK40_RS16740 PF01032 FecCD transport family CFK40_RS16745 PF01497 Periplasmic binding protein CFK40_RS16750 PF07457 Protein of unknown function (DUF1516) CFK40_RS16755 PF00202 Aminotransferase class-III CFK40_RS16760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CFK40_RS16770 PF04235 Protein of unknown function (DUF418) CFK40_RS16780 PF07690 Major Facilitator Superfamily CFK40_RS16785 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CFK40_RS16795 PF14168 YjzC-like protein CFK40_RS16800 PF12697 Alpha/beta hydrolase family CFK40_RS16805 PF12705 PD-(D/E)XK nuclease superfamily CFK40_RS16805 PF00580 UvrD/REP helicase N-terminal domain CFK40_RS16805 PF13361 UvrD-like helicase C-terminal domain CFK40_RS16810 PF12705 PD-(D/E)XK nuclease superfamily CFK40_RS16815 PF10502 Signal peptidase, peptidase S26 CFK40_RS16820 PF09335 SNARE associated Golgi protein CFK40_RS16835 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS16835 PF00501 AMP-binding enzyme CFK40_RS16840 PF03099 Biotin/lipoate A/B protein ligase family CFK40_RS16840 PF10437 Bacterial lipoate protein ligase C-terminus CFK40_RS16845 PF12706 Beta-lactamase superfamily domain CFK40_RS16850 PF14149 YhfH-like protein CFK40_RS16860 PF01593 Flavin containing amine oxidoreductase CFK40_RS16865 PF00762 Ferrochelatase CFK40_RS16870 PF01208 Uroporphyrinogen decarboxylase (URO-D) CFK40_RS16875 PF00905 Penicillin binding protein transpeptidase domain CFK40_RS16875 PF00912 Transglycosylase CFK40_RS16880 PF03992 Antibiotic biosynthesis monooxygenase CFK40_RS16890 PF02600 Disulfide bond formation protein DsbB CFK40_RS16895 PF00072 Response regulator receiver domain CFK40_RS16895 PF00196 Bacterial regulatory proteins, luxR family CFK40_RS16900 PF07730 Histidine kinase CFK40_RS16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS16900 PF00672 HAMP domain CFK40_RS16925 PF07687 Peptidase dimerisation domain CFK40_RS16925 PF01546 Peptidase family M20/M25/M40 CFK40_RS16930 PF05975 Bacterial ABC transporter protein EcsB CFK40_RS16935 PF00005 ABC transporter CFK40_RS16940 PF01230 HIT domain CFK40_RS16945 PF17099 Tryptophan transporter TrpP CFK40_RS16955 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS16960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS16965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CFK40_RS16970 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS16975 PF00571 CBS domain CFK40_RS16975 PF00005 ABC transporter CFK40_RS16980 PF12802 MarR family CFK40_RS17005 PF14147 Sporulation protein YhaL CFK40_RS17010 PF01966 HD domain CFK40_RS17010 PF01336 OB-fold nucleic acid binding domain CFK40_RS17020 PF13514 AAA domain CFK40_RS17025 PF00149 Calcineurin-like phosphoesterase CFK40_RS17035 PF00005 ABC transporter CFK40_RS17035 PF13732 Domain of unknown function (DUF4162) CFK40_RS17045 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS17050 PF06133 Control of competence regulator ComK, YlbF/YmcA CFK40_RS17055 PF13556 PucR C-terminal helix-turn-helix domain CFK40_RS17060 PF17912 MalK OB fold domain CFK40_RS17060 PF03459 TOBE domain CFK40_RS17060 PF00005 ABC transporter CFK40_RS17065 PF00269 Small, acid-soluble spore proteins, alpha/beta type CFK40_RS17070 PF00206 Lyase CFK40_RS17070 PF10415 Fumarase C C-terminus CFK40_RS17080 PF11700 Vacuole effluxer Atg22 like CFK40_RS17085 PF08864 UPF0302 domain CFK40_RS17085 PF08858 IDEAL domain CFK40_RS17090 PF01545 Cation efflux family CFK40_RS17090 PF16916 Dimerisation domain of Zinc Transporter CFK40_RS17105 PF03591 AzlC protein CFK40_RS17110 PF01497 Periplasmic binding protein CFK40_RS17115 PF00557 Metallopeptidase family M24 CFK40_RS17120 PF09680 Family of unknown function CFK40_RS17125 PF00106 short chain dehydrogenase CFK40_RS17130 PF07687 Peptidase dimerisation domain CFK40_RS17130 PF01546 Peptidase family M20/M25/M40 CFK40_RS17135 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS17140 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS17145 PF02664 S-Ribosylhomocysteinase (LuxS) CFK40_RS17150 PF13649 Methyltransferase domain CFK40_RS17155 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CFK40_RS17160 PF14148 YhdB-like protein CFK40_RS17165 PF12791 Anti-sigma factor N-terminus CFK40_RS17170 PF04542 Sigma-70 region 2 CFK40_RS17180 PF13180 PDZ domain CFK40_RS17185 PF00664 ABC transporter transmembrane region CFK40_RS17185 PF00005 ABC transporter CFK40_RS17190 PF00005 ABC transporter CFK40_RS17190 PF00664 ABC transporter transmembrane region CFK40_RS17205 PF03323 Bacillus/Clostridium GerA spore germination protein CFK40_RS17210 PF03845 Spore germination protein CFK40_RS17220 PF00248 Aldo/keto reductase family CFK40_RS17225 PF00005 ABC transporter CFK40_RS17225 PF00571 CBS domain CFK40_RS17230 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS17245 PF03176 MMPL family CFK40_RS17250 PF03033 Glycosyltransferase family 28 N-terminal domain CFK40_RS17250 PF04101 Glycosyltransferase family 28 C-terminal domain CFK40_RS17255 PF01554 MatE CFK40_RS17260 PF00171 Aldehyde dehydrogenase family CFK40_RS17275 PF01773 Na+ dependent nucleoside transporter N-terminus CFK40_RS17275 PF07662 Na+ dependent nucleoside transporter C-terminus CFK40_RS17280 PF00860 Permease family CFK40_RS17285 PF00364 Biotin-requiring enzyme CFK40_RS17285 PF02817 e3 binding domain CFK40_RS17285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFK40_RS17290 PF02779 Transketolase, pyrimidine binding domain CFK40_RS17290 PF16870 2-oxoglutarate dehydrogenase C-terminal CFK40_RS17290 PF00676 Dehydrogenase E1 component CFK40_RS17295 PF00588 SpoU rRNA Methylase family CFK40_RS17300 PF12671 Putative amidase domain CFK40_RS17305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFK40_RS17305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFK40_RS17310 PF08331 Domain of unknown function (DUF1730) CFK40_RS17325 PF01063 Amino-transferase class IV CFK40_RS17330 PF07676 WD40-like Beta Propeller Repeat CFK40_RS17330 PF00326 Prolyl oligopeptidase family CFK40_RS17340 PF12867 DinB superfamily CFK40_RS17355 PF00005 ABC transporter CFK40_RS17365 PF00072 Response regulator receiver domain CFK40_RS17365 PF00196 Bacterial regulatory proteins, luxR family CFK40_RS17375 PF07730 Histidine kinase CFK40_RS17385 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS17385 PF00107 Zinc-binding dehydrogenase CFK40_RS17395 PF08179 Small acid-soluble spore protein P family CFK40_RS17400 PF13536 Putative multidrug resistance efflux transporter CFK40_RS17405 PF07690 Major Facilitator Superfamily CFK40_RS17410 PF11724 YvbH-like oligomerisation region CFK40_RS17410 PF08000 Bacterial PH domain CFK40_RS17425 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS17425 PF00501 AMP-binding enzyme CFK40_RS17430 PF13407 Periplasmic binding protein domain CFK40_RS17435 PF02653 Branched-chain amino acid transport system / permease component CFK40_RS17440 PF00005 ABC transporter CFK40_RS17445 PF05025 RbsD / FucU transport protein family CFK40_RS17450 PF00294 pfkB family carbohydrate kinase CFK40_RS17455 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS17460 PF14748 Pyrroline-5-carboxylate reductase dimerisation CFK40_RS17460 PF03807 NADP oxidoreductase coenzyme F420-dependent CFK40_RS17465 PF09529 Integral membrane protein (intg_mem_TP0381) CFK40_RS17470 PF00005 ABC transporter CFK40_RS17470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS17475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFK40_RS17475 PF00005 ABC transporter CFK40_RS17480 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS17480 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS17485 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS17490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS17500 PF00929 Exonuclease CFK40_RS17500 PF01336 OB-fold nucleic acid binding domain CFK40_RS17500 PF11490 DNA polymerase III polC-type N-terminus II CFK40_RS17500 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFK40_RS17500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFK40_RS17500 PF14579 Helix-hairpin-helix motif CFK40_RS17500 PF02811 PHP domain CFK40_RS17505 PF00082 Subtilase family CFK40_RS17510 PF02595 Glycerate kinase family CFK40_RS17515 PF00180 Isocitrate/isopropylmalate dehydrogenase CFK40_RS17520 PF00939 Sodium:sulfate symporter transmembrane region CFK40_RS17525 PF07729 FCD domain CFK40_RS17525 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS17550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CFK40_RS17555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CFK40_RS17560 PF03480 Bacterial extracellular solute-binding protein, family 7 CFK40_RS17565 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CFK40_RS17565 PF02837 Glycosyl hydrolases family 2, sugar binding domain CFK40_RS17565 PF00703 Glycosyl hydrolases family 2 CFK40_RS17575 PF00072 Response regulator receiver domain CFK40_RS17575 PF12833 Helix-turn-helix domain CFK40_RS17580 PF06580 Histidine kinase CFK40_RS17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS17580 PF00672 HAMP domain CFK40_RS17580 PF02743 Cache domain CFK40_RS17585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFK40_RS17585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFK40_RS17590 PF00596 Class II Aldolase and Adducin N-terminal domain CFK40_RS17595 PF01261 Xylose isomerase-like TIM barrel CFK40_RS17600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFK40_RS17615 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS17620 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS17625 PF04854 Protein of unknown function, DUF624 CFK40_RS17645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS17650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFK40_RS17650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFK40_RS17660 PF00480 ROK family CFK40_RS17660 PF01047 MarR family CFK40_RS17670 PF00294 pfkB family carbohydrate kinase CFK40_RS17680 PF01081 KDPG and KHG aldolase CFK40_RS17685 PF00106 short chain dehydrogenase CFK40_RS17690 PF03786 D-mannonate dehydratase (UxuA) CFK40_RS17695 PF02614 Glucuronate isomerase CFK40_RS17705 PF07687 Peptidase dimerisation domain CFK40_RS17705 PF01546 Peptidase family M20/M25/M40 CFK40_RS17715 PF01717 Cobalamin-independent synthase, Catalytic domain CFK40_RS17720 PF07731 Multicopper oxidase CFK40_RS17720 PF07732 Multicopper oxidase CFK40_RS17720 PF00394 Multicopper oxidase CFK40_RS17725 PF00343 Carbohydrate phosphorylase CFK40_RS17730 PF00534 Glycosyl transferases group 1 CFK40_RS17730 PF08323 Starch synthase catalytic domain CFK40_RS17735 PF00483 Nucleotidyl transferase CFK40_RS17740 PF00483 Nucleotidyl transferase CFK40_RS17745 PF00128 Alpha amylase, catalytic domain CFK40_RS17745 PF02806 Alpha amylase, C-terminal all-beta domain CFK40_RS17745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFK40_RS17750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CFK40_RS17750 PF17999 Pullulanase N1-terminal domain CFK40_RS17750 PF00128 Alpha amylase, catalytic domain CFK40_RS17755 PF16884 N-terminal domain of oxidoreductase CFK40_RS17755 PF00107 Zinc-binding dehydrogenase CFK40_RS17760 PF00753 Metallo-beta-lactamase superfamily CFK40_RS17780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS17780 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS17780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS17785 PF00860 Permease family CFK40_RS17790 PF11392 Protein of unknown function (DUF2877) CFK40_RS17795 PF00266 Aminotransferase class-V CFK40_RS17800 PF17853 GGDEF-like domain CFK40_RS17800 PF13556 PucR C-terminal helix-turn-helix domain CFK40_RS17800 PF07905 Purine catabolism regulatory protein-like family CFK40_RS17805 PF03606 C4-dicarboxylate anaerobic carrier CFK40_RS17810 PF01979 Amidohydrolase family CFK40_RS17815 PF01979 Amidohydrolase family CFK40_RS17820 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CFK40_RS17825 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CFK40_RS17830 PF02615 Malate/L-lactate dehydrogenase CFK40_RS17835 PF02615 Malate/L-lactate dehydrogenase CFK40_RS17840 PF07883 Cupin domain CFK40_RS17840 PF05899 Protein of unknown function (DUF861) CFK40_RS17845 PF00696 Amino acid kinase family CFK40_RS17850 PF06545 Protein of unknown function (DUF1116) CFK40_RS17855 PF00549 CoA-ligase CFK40_RS17855 PF02629 CoA binding domain CFK40_RS17860 PF01546 Peptidase family M20/M25/M40 CFK40_RS17865 PF00135 Carboxylesterase family CFK40_RS17875 PF07690 Major Facilitator Superfamily CFK40_RS17885 PF00067 Cytochrome P450 CFK40_RS17905 PF00474 Sodium:solute symporter family CFK40_RS17930 PF02554 Carbon starvation protein CstA CFK40_RS17935 PF04397 LytTr DNA-binding domain CFK40_RS17935 PF00072 Response regulator receiver domain CFK40_RS17940 PF13492 GAF domain CFK40_RS17940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS17940 PF06580 Histidine kinase CFK40_RS17940 PF07694 5TMR of 5TMR-LYT CFK40_RS17945 PF00625 Guanylate kinase CFK40_RS17970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFK40_RS18005 PF00005 ABC transporter CFK40_RS18015 PF02661 Fic/DOC family CFK40_RS18020 PF06908 YspA SLOG family CFK40_RS18025 PF00005 ABC transporter CFK40_RS18030 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS18035 PF01910 Thiamine-binding protein CFK40_RS18040 PF09084 NMT1/THI5 like CFK40_RS18045 PF01741 Large-conductance mechanosensitive channel, MscL CFK40_RS18065 PF00313 'Cold-shock' DNA-binding domain CFK40_RS18075 PF02080 TrkA-C domain CFK40_RS18075 PF03600 Citrate transporter CFK40_RS18080 PF01747 ATP-sulfurylase CFK40_RS18080 PF14306 PUA-like domain CFK40_RS18090 PF14824 Sirohaem biosynthesis protein central CFK40_RS18095 PF01903 CbiX CFK40_RS18100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFK40_RS18105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFK40_RS18105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFK40_RS18110 PF00258 Flavodoxin CFK40_RS18110 PF00175 Oxidoreductase NAD-binding domain CFK40_RS18110 PF00667 FAD binding domain CFK40_RS18115 PF01507 Phosphoadenosine phosphosulfate reductase family CFK40_RS18120 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS18125 PF02219 Methylenetetrahydrofolate reductase CFK40_RS18125 PF02574 Homocysteine S-methyltransferase CFK40_RS18130 PF01717 Cobalamin-independent synthase, Catalytic domain CFK40_RS18130 PF08267 Cobalamin-independent synthase, N-terminal domain CFK40_RS18140 PF01037 Lrp/AsnC ligand binding domain CFK40_RS18145 PF00155 Aminotransferase class I and II CFK40_RS18150 PF00171 Aldehyde dehydrogenase family CFK40_RS18155 PF02833 DHHA2 domain CFK40_RS18155 PF01368 DHH family CFK40_RS18160 PF00355 Rieske [2Fe-2S] domain CFK40_RS18160 PF01266 FAD dependent oxidoreductase CFK40_RS18170 PF01266 FAD dependent oxidoreductase CFK40_RS18175 PF00582 Universal stress protein family CFK40_RS18180 PF01740 STAS domain CFK40_RS18180 PF00916 Sulfate permease family CFK40_RS18190 PF00892 EamA-like transporter family CFK40_RS18205 PF00171 Aldehyde dehydrogenase family CFK40_RS18215 PF14864 Alkyl sulfatase C-terminal CFK40_RS18215 PF14863 Alkyl sulfatase dimerisation CFK40_RS18215 PF00753 Metallo-beta-lactamase superfamily CFK40_RS18220 PF00107 Zinc-binding dehydrogenase CFK40_RS18220 PF08240 Alcohol dehydrogenase GroES-like domain CFK40_RS18225 PF01970 Tripartite tricarboxylate transporter TctA family CFK40_RS18235 PF03401 Tripartite tricarboxylate transporter family receptor CFK40_RS18240 PF00356 Bacterial regulatory proteins, lacI family CFK40_RS18250 PF01925 Sulfite exporter TauE/SafE CFK40_RS18255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFK40_RS18255 PF03466 LysR substrate binding domain CFK40_RS18260 PF02796 Helix-turn-helix domain of resolvase CFK40_RS18260 PF00239 Resolvase, N terminal domain CFK40_RS18265 PF14864 Alkyl sulfatase C-terminal CFK40_RS18265 PF14863 Alkyl sulfatase dimerisation CFK40_RS18265 PF00753 Metallo-beta-lactamase superfamily CFK40_RS18275 PF00465 Iron-containing alcohol dehydrogenase CFK40_RS18280 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS18290 PF07690 Major Facilitator Superfamily CFK40_RS18295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFK40_RS18295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFK40_RS18300 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS18300 PF00501 AMP-binding enzyme CFK40_RS18305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS18305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS18305 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS18315 PF00378 Enoyl-CoA hydratase/isomerase CFK40_RS18320 PF02803 Thiolase, C-terminal domain CFK40_RS18320 PF00108 Thiolase, N-terminal domain CFK40_RS18325 PF01012 Electron transfer flavoprotein domain CFK40_RS18325 PF00766 Electron transfer flavoprotein FAD-binding domain CFK40_RS18330 PF01012 Electron transfer flavoprotein domain CFK40_RS18335 PF00158 Sigma-54 interaction domain CFK40_RS18425 PF00589 Phage integrase family CFK40_RS18425 PF02899 Phage integrase, N-terminal SAM-like domain CFK40_RS18515 PF14540 Nucleotidyltransferase-like CFK40_RS18515 PF18576 Helix-turn-helix domain CFK40_RS18520 PF11023 Zinc-ribbon containing domain CFK40_RS18525 PF00117 Glutamine amidotransferase class-I CFK40_RS18530 PF00425 chorismate binding enzyme CFK40_RS18530 PF04715 Anthranilate synthase component I, N terminal region CFK40_RS18535 PF01475 Ferric uptake regulator family CFK40_RS18540 PF01923 Cobalamin adenosyltransferase CFK40_RS18545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFK40_RS18550 PF02073 Thermophilic metalloprotease (M29) CFK40_RS18555 PF00578 AhpC/TSA family CFK40_RS18560 PF07885 Ion channel CFK40_RS18565 PF00072 Response regulator receiver domain CFK40_RS18565 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS18570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS18575 PF00005 ABC transporter CFK40_RS18580 PF02687 FtsX-like permease family CFK40_RS18585 PF00202 Aminotransferase class-III CFK40_RS18590 PF00005 ABC transporter CFK40_RS18590 PF00664 ABC transporter transmembrane region CFK40_RS18595 PF04167 Protein of unknown function (DUF402) CFK40_RS18600 PF04259 Small, acid-soluble spore protein, gamma-type CFK40_RS18605 PF14815 NUDIX domain CFK40_RS18605 PF00730 HhH-GPD superfamily base excision DNA repair protein CFK40_RS18610 PF04307 LexA-binding, inner membrane-associated putative hydrolase CFK40_RS18620 PF00106 short chain dehydrogenase CFK40_RS18625 PF02631 RecX family CFK40_RS18630 PF08338 Domain of unknown function (DUF1731) CFK40_RS18630 PF01370 NAD dependent epimerase/dehydratase family CFK40_RS18645 PF00005 ABC transporter CFK40_RS18660 PF10431 C-terminal, D2-small domain, of ClpB protein CFK40_RS18660 PF17871 AAA lid domain CFK40_RS18660 PF00004 ATPase family associated with various cellular activities (AAA) CFK40_RS18660 PF07724 AAA domain (Cdc48 subfamily) CFK40_RS18665 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS18665 PF00501 AMP-binding enzyme CFK40_RS18675 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS18675 PF00672 HAMP domain CFK40_RS18680 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS18680 PF00072 Response regulator receiver domain CFK40_RS18685 PF00939 Sodium:sulfate symporter transmembrane region CFK40_RS18690 PF02595 Glycerate kinase family CFK40_RS18695 PF01522 Polysaccharide deacetylase CFK40_RS18700 PF13726 Na+-H+ antiporter family CFK40_RS18700 PF03553 Na+/H+ antiporter family CFK40_RS18705 PF14167 YfkD-like protein CFK40_RS18715 PF07690 Major Facilitator Superfamily CFK40_RS18720 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS18725 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFK40_RS18735 PF03631 Virulence factor BrkB CFK40_RS18745 PF01235 Sodium:alanine symporter family CFK40_RS18750 PF02586 SOS response associated peptidase (SRAP) CFK40_RS18755 PF04960 Glutaminase CFK40_RS18760 PF01553 Acyltransferase CFK40_RS18765 PF00188 Cysteine-rich secretory protein family CFK40_RS18775 PF02515 CoA-transferase family III CFK40_RS18780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFK40_RS18780 PF02770 Acyl-CoA dehydrogenase, middle domain CFK40_RS18780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFK40_RS18785 PF00171 Aldehyde dehydrogenase family CFK40_RS18795 PF09339 IclR helix-turn-helix domain CFK40_RS18795 PF01614 Bacterial transcriptional regulator CFK40_RS18800 PF03435 Saccharopine dehydrogenase NADP binding domain CFK40_RS18800 PF16653 Saccharopine dehydrogenase C-terminal domain CFK40_RS18805 PF00171 Aldehyde dehydrogenase family CFK40_RS18810 PF00205 Thiamine pyrophosphate enzyme, central domain CFK40_RS18810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFK40_RS18810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFK40_RS18815 PF00155 Aminotransferase class I and II CFK40_RS18820 PF03553 Na+/H+ antiporter family CFK40_RS18825 PF00266 Aminotransferase class-V CFK40_RS18830 PF04199 Putative cyclase CFK40_RS18835 PF03301 Tryptophan 2,3-dioxygenase CFK40_RS18840 PF00209 Sodium:neurotransmitter symporter family CFK40_RS18845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFK40_RS18845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFK40_RS18855 PF03741 Integral membrane protein TerC family CFK40_RS18875 PF00005 ABC transporter CFK40_RS18875 PF16326 ABC transporter C-terminal domain CFK40_RS18875 PF12848 ABC transporter CFK40_RS18885 PF00885 6,7-dimethyl-8-ribityllumazine synthase CFK40_RS18890 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CFK40_RS18890 PF00925 GTP cyclohydrolase II CFK40_RS18895 PF00677 Lumazine binding domain CFK40_RS18900 PF01872 RibD C-terminal domain CFK40_RS18900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFK40_RS18915 PF03576 Peptidase family S58 CFK40_RS18935 PF04545 Sigma-70, region 4 CFK40_RS18935 PF04542 Sigma-70 region 2 CFK40_RS18945 PF13307 Helicase C-terminal domain CFK40_RS18950 PF00849 RNA pseudouridylate synthase CFK40_RS18950 PF01479 S4 domain CFK40_RS18955 PF12728 Helix-turn-helix domain CFK40_RS18965 PF00005 ABC transporter CFK40_RS18970 PF00005 ABC transporter CFK40_RS18975 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS18975 PF12911 N-terminal TM domain of oligopeptide transport permease C CFK40_RS18980 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS18985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS18990 PF01774 UreD urease accessory protein CFK40_RS18995 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFK40_RS19000 PF01730 UreF CFK40_RS19005 PF05194 UreE urease accessory protein, C-terminal domain CFK40_RS19005 PF02814 UreE urease accessory protein, N-terminal domain CFK40_RS19010 PF01979 Amidohydrolase family CFK40_RS19010 PF00449 Urease alpha-subunit, N-terminal domain CFK40_RS19015 PF00699 Urease beta subunit CFK40_RS19020 PF00547 Urease, gamma subunit CFK40_RS19040 PF00293 NUDIX domain CFK40_RS19060 PF00293 NUDIX domain CFK40_RS19060 PF13344 Haloacid dehalogenase-like hydrolase CFK40_RS19065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFK40_RS19090 PF00579 tRNA synthetases class I (W and Y) CFK40_RS19090 PF01479 S4 domain CFK40_RS19105 PF00484 Carbonic anhydrase CFK40_RS19110 PF02913 FAD linked oxidases, C-terminal domain CFK40_RS19110 PF01565 FAD binding domain CFK40_RS19115 PF00245 Alkaline phosphatase CFK40_RS19125 PF01040 UbiA prenyltransferase family CFK40_RS19135 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS19160 PF02645 Uncharacterised protein, DegV family COG1307 CFK40_RS19170 PF02681 Divergent PAP2 family CFK40_RS19175 PF07308 Protein of unknown function (DUF1456) CFK40_RS19185 PF00206 Lyase CFK40_RS19185 PF10415 Fumarase C C-terminus CFK40_RS19190 PF01207 Dihydrouridine synthase (Dus) CFK40_RS19200 PF01938 TRAM domain CFK40_RS19200 PF05958 tRNA (Uracil-5-)-methyltransferase CFK40_RS19210 PF00781 Diacylglycerol kinase catalytic domain CFK40_RS19215 PF02934 GatB/GatE catalytic domain CFK40_RS19215 PF02637 GatB domain CFK40_RS19220 PF01425 Amidase CFK40_RS19225 PF02686 Glu-tRNAGln amidotransferase C subunit CFK40_RS19230 PF18801 response regulator aspartate phosphatase H, N terminal CFK40_RS19235 PF00171 Aldehyde dehydrogenase family CFK40_RS19240 PF07537 CamS sex pheromone cAM373 precursor CFK40_RS19245 PF12826 Helix-hairpin-helix motif CFK40_RS19245 PF00533 BRCA1 C Terminus (BRCT) domain CFK40_RS19245 PF01653 NAD-dependent DNA ligase adenylation domain CFK40_RS19245 PF03120 NAD-dependent DNA ligase OB-fold domain CFK40_RS19245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CFK40_RS19250 PF00580 UvrD/REP helicase N-terminal domain CFK40_RS19250 PF13361 UvrD-like helicase C-terminal domain CFK40_RS19255 PF01884 PcrB family CFK40_RS19260 PF01371 Trp repressor protein CFK40_RS19265 PF11258 Protein of unknown function (DUF3048) N-terminal domain CFK40_RS19265 PF17479 Protein of unknown function (DUF3048) C-terminal domain CFK40_RS19270 PF13382 Adenine deaminase C-terminal domain CFK40_RS19270 PF01979 Amidohydrolase family CFK40_RS19275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CFK40_RS19275 PF02843 Phosphoribosylglycinamide synthetase, C domain CFK40_RS19275 PF02844 Phosphoribosylglycinamide synthetase, N domain CFK40_RS19280 PF01808 AICARFT/IMPCHase bienzyme CFK40_RS19280 PF02142 MGS-like domain CFK40_RS19285 PF00551 Formyl transferase CFK40_RS19290 PF00586 AIR synthase related protein, N-terminal domain CFK40_RS19290 PF02769 AIR synthase related protein, C-terminal domain CFK40_RS19295 PF00156 Phosphoribosyl transferase domain CFK40_RS19300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CFK40_RS19300 PF02769 AIR synthase related protein, C-terminal domain CFK40_RS19300 PF00586 AIR synthase related protein, N-terminal domain CFK40_RS19310 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CFK40_RS19315 PF01259 SAICAR synthetase CFK40_RS19320 PF00206 Lyase CFK40_RS19320 PF10397 Adenylosuccinate lyase C-terminus CFK40_RS19325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CFK40_RS19325 PF02222 ATP-grasp domain CFK40_RS19330 PF00731 AIR carboxylase CFK40_RS19335 PF00156 Phosphoribosyl transferase domain CFK40_RS19340 PF00860 Permease family CFK40_RS19345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CFK40_RS19350 PF03475 3-alpha domain CFK40_RS19350 PF03473 MOSC domain CFK40_RS19355 PF01625 Peptide methionine sulfoxide reductase CFK40_RS19360 PF12832 MFS_1 like family CFK40_RS19365 PF00860 Permease family CFK40_RS19370 PF00117 Glutamine amidotransferase class-I CFK40_RS19370 PF02540 NAD synthase CFK40_RS19370 PF00958 GMP synthase C terminal domain CFK40_RS19375 PF01841 Transglutaminase-like superfamily CFK40_RS19375 PF13559 Domain of unknown function (DUF4129) CFK40_RS19375 PF11992 Domain of unknown function (DUF3488) CFK40_RS19380 PF01882 Protein of unknown function DUF58 CFK40_RS19385 PF17863 AAA lid domain CFK40_RS19385 PF07726 ATPase family associated with various cellular activities (AAA) CFK40_RS19390 PF05504 Spore germination B3/ GerAC like, C-terminal CFK40_RS19395 PF03845 Spore germination protein CFK40_RS19400 PF03323 Bacillus/Clostridium GerA spore germination protein CFK40_RS19420 PF07070 SpoOM protein CFK40_RS19425 PF02254 TrkA-N domain CFK40_RS19425 PF02080 TrkA-C domain CFK40_RS19430 PF02386 Cation transport protein CFK40_RS19435 PF03009 Glycerophosphoryl diester phosphodiesterase family CFK40_RS19440 PF04231 Endonuclease I CFK40_RS19445 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS19450 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS19455 PF00005 ABC transporter CFK40_RS19465 PF02811 PHP domain CFK40_RS19470 PF00005 ABC transporter CFK40_RS19475 PF07969 Amidohydrolase family CFK40_RS19480 PF00005 ABC transporter CFK40_RS19485 PF06007 Phosphonate metabolism protein PhnJ CFK40_RS19490 PF05861 Bacterial phosphonate metabolism protein (PhnI) CFK40_RS19505 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS19505 PF07702 UTRA domain CFK40_RS19520 PF07690 Major Facilitator Superfamily CFK40_RS19525 PF00557 Metallopeptidase family M24 CFK40_RS19535 PF00171 Aldehyde dehydrogenase family CFK40_RS19540 PF00474 Sodium:solute symporter family CFK40_RS19545 PF00296 Luciferase-like monooxygenase CFK40_RS19555 PF00375 Sodium:dicarboxylate symporter family CFK40_RS19560 PF00118 TCP-1/cpn60 chaperonin family CFK40_RS19565 PF00166 Chaperonin 10 Kd subunit CFK40_RS19570 PF02517 CPBP intramembrane metalloprotease CFK40_RS19590 PF01022 Bacterial regulatory protein, arsR family CFK40_RS19595 PF16916 Dimerisation domain of Zinc Transporter CFK40_RS19595 PF01545 Cation efflux family CFK40_RS19600 PF00403 Heavy-metal-associated domain CFK40_RS19605 PF01022 Bacterial regulatory protein, arsR family CFK40_RS19610 PF10026 Predicted Zn-dependent protease (DUF2268) CFK40_RS19620 PF08241 Methyltransferase domain CFK40_RS19625 PF07282 Putative transposase DNA-binding domain CFK40_RS19625 PF01385 Probable transposase CFK40_RS19625 PF12323 Helix-turn-helix domain CFK40_RS19635 PF02629 CoA binding domain CFK40_RS19635 PF06971 Putative DNA-binding protein N-terminus CFK40_RS19640 PF01967 MoaC family CFK40_RS19645 PF00005 ABC transporter CFK40_RS19645 PF16326 ABC transporter C-terminal domain CFK40_RS19645 PF12848 ABC transporter CFK40_RS19650 PF00814 Glycoprotease family CFK40_RS19655 PF00583 Acetyltransferase (GNAT) family CFK40_RS19660 PF00814 Glycoprotease family CFK40_RS19665 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CFK40_RS19670 PF02769 AIR synthase related protein, C-terminal domain CFK40_RS19670 PF00586 AIR synthase related protein, N-terminal domain CFK40_RS19760 PF10263 SprT-like family CFK40_RS19765 PF00199 Catalase CFK40_RS19765 PF06628 Catalase-related immune-responsive CFK40_RS19770 PF09371 Tex-like protein N-terminal domain CFK40_RS19770 PF00575 S1 RNA binding domain CFK40_RS19770 PF17674 HHH domain CFK40_RS19770 PF16921 Tex protein YqgF-like domain CFK40_RS19775 PF07228 Stage II sporulation protein E (SpoIIE) CFK40_RS19780 PF04545 Sigma-70, region 4 CFK40_RS19780 PF04542 Sigma-70 region 2 CFK40_RS19780 PF04539 Sigma-70 region 3 CFK40_RS19785 PF13581 Histidine kinase-like ATPase domain CFK40_RS19790 PF01740 STAS domain CFK40_RS19795 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain CFK40_RS19795 PF07228 Stage II sporulation protein E (SpoIIE) CFK40_RS19800 PF13581 Histidine kinase-like ATPase domain CFK40_RS19805 PF01740 STAS domain CFK40_RS19810 PF01740 STAS domain CFK40_RS19810 PF08678 Rsbr N terminal CFK40_RS19815 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CFK40_RS19825 PF00842 Alanine racemase, C-terminal domain CFK40_RS19825 PF01168 Alanine racemase, N-terminal domain CFK40_RS19830 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain CFK40_RS19830 PF01740 STAS domain CFK40_RS19845 PF01648 4'-phosphopantetheinyl transferase superfamily CFK40_RS19850 PF01694 Rhomboid family CFK40_RS19855 PF01679 Proteolipid membrane potential modulator CFK40_RS19860 PF03703 Bacterial PH domain CFK40_RS19865 PF03703 Bacterial PH domain CFK40_RS19870 PF00270 DEAD/DEAH box helicase CFK40_RS19870 PF00271 Helicase conserved C-terminal domain CFK40_RS19880 PF02645 Uncharacterised protein, DegV family COG1307 CFK40_RS19885 PF12146 Serine aminopeptidase, S33 CFK40_RS19905 PF00005 ABC transporter CFK40_RS19915 PF06724 Domain of Unknown Function (DUF1206) CFK40_RS19930 PF00781 Diacylglycerol kinase catalytic domain CFK40_RS19940 PF00005 ABC transporter CFK40_RS19945 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS19950 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS19955 PF02872 5'-nucleotidase, C-terminal domain CFK40_RS19955 PF00149 Calcineurin-like phosphoesterase CFK40_RS19965 PF00672 HAMP domain CFK40_RS19965 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS19970 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS19970 PF00072 Response regulator receiver domain CFK40_RS19980 PF00085 Thioredoxin CFK40_RS20000 PF09587 Bacterial capsule synthesis protein PGA_cap CFK40_RS20005 PF10011 Predicted membrane protein (DUF2254) CFK40_RS20025 PF04542 Sigma-70 region 2 CFK40_RS20025 PF08281 Sigma-70, region 4 CFK40_RS20030 PF00005 ABC transporter CFK40_RS20035 PF12679 ABC-2 family transporter protein CFK40_RS20045 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS20045 PF07702 UTRA domain CFK40_RS20050 PF16657 Maltogenic Amylase, C-terminal domain CFK40_RS20050 PF00128 Alpha amylase, catalytic domain CFK40_RS20055 PF02378 Phosphotransferase system, EIIC CFK40_RS20055 PF00367 phosphotransferase system, EIIB CFK40_RS20065 PF09819 ABC-type cobalt transport system, permease component CFK40_RS20070 PF00005 ABC transporter CFK40_RS20075 PF02361 Cobalt transport protein CFK40_RS20080 PF01053 Cys/Met metabolism PLP-dependent enzyme CFK40_RS20085 PF00561 alpha/beta hydrolase fold CFK40_RS20090 PF00679 Elongation factor G C-terminus CFK40_RS20090 PF14492 Elongation Factor G, domain II CFK40_RS20090 PF00009 Elongation factor Tu GTP binding domain CFK40_RS20090 PF03144 Elongation factor Tu domain 2 CFK40_RS20095 PF00672 HAMP domain CFK40_RS20095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFK40_RS20095 PF00512 His Kinase A (phospho-acceptor) domain CFK40_RS20100 PF00486 Transcriptional regulatory protein, C terminal CFK40_RS20100 PF00072 Response regulator receiver domain CFK40_RS20105 PF13180 PDZ domain CFK40_RS20115 PF13977 BetI-type transcriptional repressor, C-terminal CFK40_RS20115 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS20120 PF00005 ABC transporter CFK40_RS20120 PF13732 Domain of unknown function (DUF4162) CFK40_RS20130 PF01258 Prokaryotic dksA/traR C4-type zinc finger CFK40_RS20135 PF13673 Acetyltransferase (GNAT) domain CFK40_RS20140 PF00268 Ribonucleotide reductase, small chain CFK40_RS20145 PF03477 ATP cone domain CFK40_RS20145 PF02867 Ribonucleotide reductase, barrel domain CFK40_RS20145 PF00317 Ribonucleotide reductase, all-alpha domain CFK40_RS20150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFK40_RS20150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFK40_RS20160 PF08241 Methyltransferase domain CFK40_RS20165 PF00313 'Cold-shock' DNA-binding domain CFK40_RS20170 PF00108 Thiolase, N-terminal domain CFK40_RS20170 PF02803 Thiolase, C-terminal domain CFK40_RS20175 PF13193 AMP-binding enzyme C-terminal domain CFK40_RS20175 PF00501 AMP-binding enzyme CFK40_RS20180 PF02632 BioY family CFK40_RS20185 PF17773 UPF0176 acylphosphatase like domain CFK40_RS20185 PF12368 Rhodanase C-terminal CFK40_RS20185 PF00581 Rhodanese-like domain CFK40_RS20205 PF16868 NMT1-like family CFK40_RS20210 PF00255 Glutathione peroxidase CFK40_RS20215 PF09180 Prolyl-tRNA synthetase, C-terminal CFK40_RS20215 PF03129 Anticodon binding domain CFK40_RS20215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFK40_RS20230 PF08543 Phosphomethylpyrimidine kinase CFK40_RS20235 PF04306 Protein of unknown function (DUF456) CFK40_RS20240 PF02660 Glycerol-3-phosphate acyltransferase CFK40_RS20245 PF13539 D-alanyl-D-alanine carboxypeptidase CFK40_RS20250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFK40_RS20265 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFK40_RS20270 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS20275 PF00528 Binding-protein-dependent transport system inner membrane component CFK40_RS20280 PF00005 ABC transporter CFK40_RS20285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CFK40_RS20285 PF01565 FAD binding domain CFK40_RS20295 PF04304 Protein of unknown function (DUF454) CFK40_RS20300 PF02811 PHP domain CFK40_RS20305 PF13393 Histidyl-tRNA synthetase CFK40_RS20310 PF01634 ATP phosphoribosyltransferase CFK40_RS20315 PF00815 Histidinol dehydrogenase CFK40_RS20320 PF00475 Imidazoleglycerol-phosphate dehydratase CFK40_RS20325 PF00117 Glutamine amidotransferase class-I CFK40_RS20330 PF00977 Histidine biosynthesis protein CFK40_RS20335 PF00977 Histidine biosynthesis protein CFK40_RS20340 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CFK40_RS20340 PF01502 Phosphoribosyl-AMP cyclohydrolase CFK40_RS20345 PF00155 Aminotransferase class I and II CFK40_RS20350 PF05698 Bacterial trigger factor protein (TF) C-terminus CFK40_RS20355 PF01323 DSBA-like thioredoxin domain CFK40_RS20360 PF00753 Metallo-beta-lactamase superfamily CFK40_RS20365 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) CFK40_RS20370 PF04294 VanW like protein CFK40_RS20375 PF01070 FMN-dependent dehydrogenase CFK40_RS20380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFK40_RS20385 PF00893 Small Multidrug Resistance protein CFK40_RS20390 PF00893 Small Multidrug Resistance protein CFK40_RS20395 PF13977 BetI-type transcriptional repressor, C-terminal CFK40_RS20395 PF00440 Bacterial regulatory proteins, tetR family CFK40_RS20400 PF02824 TGS domain CFK40_RS20400 PF13291 ACT domain CFK40_RS20400 PF04607 Region found in RelA / SpoT proteins CFK40_RS20405 PF03193 RsgA GTPase CFK40_RS20410 PF00248 Aldo/keto reductase family CFK40_RS20415 PF12848 ABC transporter CFK40_RS20415 PF16326 ABC transporter C-terminal domain CFK40_RS20415 PF00005 ABC transporter CFK40_RS20425 PF01425 Amidase CFK40_RS20435 PF02632 BioY family CFK40_RS20440 PF04055 Radical SAM superfamily CFK40_RS20440 PF06968 Biotin and Thiamin Synthesis associated domain CFK40_RS20445 PF00958 GMP synthase C terminal domain CFK40_RS20445 PF03352 Methyladenine glycosylase CFK40_RS20445 PF13302 Acetyltransferase (GNAT) domain CFK40_RS20445 PF13673 Acetyltransferase (GNAT) domain CFK40_RS20445 PF00117 Glutamine amidotransferase class-I CFK40_RS20450 PF00581 Rhodanese-like domain CFK40_RS20455 PF07687 Peptidase dimerisation domain CFK40_RS20455 PF01546 Peptidase family M20/M25/M40 CFK40_RS20460 PF13460 NAD(P)H-binding CFK40_RS20465 PF01738 Dienelactone hydrolase family CFK40_RS20470 PF02557 D-alanyl-D-alanine carboxypeptidase CFK40_RS20475 PF01966 HD domain CFK40_RS20480 PF00455 DeoR C terminal sensor domain CFK40_RS20480 PF08220 DeoR-like helix-turn-helix domain CFK40_RS20485 PF00294 pfkB family carbohydrate kinase CFK40_RS20490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFK40_RS20490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFK40_RS20500 PF16326 ABC transporter C-terminal domain CFK40_RS20500 PF12848 ABC transporter CFK40_RS20500 PF00005 ABC transporter CFK40_RS20505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFK40_RS20515 PF00881 Nitroreductase family CFK40_RS20520 PF07478 D-ala D-ala ligase C-terminus CFK40_RS20520 PF01820 D-ala D-ala ligase N-terminus CFK40_RS20525 PF04715 Anthranilate synthase component I, N terminal region CFK40_RS20525 PF00425 chorismate binding enzyme CFK40_RS20530 PF00591 Glycosyl transferase family, a/b domain CFK40_RS20530 PF02885 Glycosyl transferase family, helical bundle domain CFK40_RS20530 PF00117 Glutamine amidotransferase class-I CFK40_RS20535 PF00591 Glycosyl transferase family, a/b domain CFK40_RS20535 PF02885 Glycosyl transferase family, helical bundle domain CFK40_RS20540 PF00218 Indole-3-glycerol phosphate synthase CFK40_RS20545 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CFK40_RS20550 PF00291 Pyridoxal-phosphate dependent enzyme CFK40_RS20555 PF00290 Tryptophan synthase alpha chain CFK40_RS20560 PF12833 Helix-turn-helix domain CFK40_RS20560 PF06445 GyrI-like small molecule binding domain CFK40_RS20575 PF03413 Peptidase propeptide and YPEB domain CFK40_RS20575 PF07504 Fungalysin/Thermolysin Propeptide Motif CFK40_RS20575 PF02868 Thermolysin metallopeptidase, alpha-helical domain CFK40_RS20575 PF01447 Thermolysin metallopeptidase, catalytic domain CFK40_RS20580 PF03099 Biotin/lipoate A/B protein ligase family CFK40_RS20585 PF04055 Radical SAM superfamily CFK40_RS20585 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CFK40_RS20595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CFK40_RS20595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CFK40_RS20625 PF00005 ABC transporter CFK40_RS20630 PF00392 Bacterial regulatory proteins, gntR family CFK40_RS20640 PF08245 Mur ligase middle domain CFK40_RS20640 PF02875 Mur ligase family, glutamate ligase domain CFK40_RS20640 PF01225 Mur ligase family, catalytic domain CFK40_RS20645 PF02028 BCCT, betaine/carnitine/choline family transporter CFK40_RS20655 PF00753 Metallo-beta-lactamase superfamily CFK40_RS20665 PF07875 Coat F domain CFK40_RS20670 PF00854 POT family