locus-tag	class	description
LVJ81_RS00005	COG4221	oxidoreductase activity
LVJ81_RS00030	COG0142	geranyltranstransferase activity
LVJ81_RS00040	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LVJ81_RS00045	COG0463	Glycosyl transferase, family 2
LVJ81_RS00055	COG4224	UPF0291 protein
LVJ81_RS00060	COG1733	regulation of RNA biosynthetic process
LVJ81_RS00065	COG1794	racemase activity, acting on amino acids and derivatives
LVJ81_RS00080	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LVJ81_RS00085	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LVJ81_RS00090	COG1999	signal sequence binding
LVJ81_RS00105	COG0842	Transport permease protein
LVJ81_RS00110	COG1131	(ABC) transporter
LVJ81_RS00115	COG2252	PERMEase
LVJ81_RS00130	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LVJ81_RS00140	COG1127	ABC transporter
LVJ81_RS00145	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LVJ81_RS00150	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LVJ81_RS00175	COG0824	Thioesterase
LVJ81_RS00205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LVJ81_RS00210	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ81_RS00235	COG1802	Transcriptional regulator
LVJ81_RS00240	COG1115	amino acid carrier protein
LVJ81_RS00330	COG1053	succinate dehydrogenase
LVJ81_RS00340	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS00420	COG0714	Associated with various cellular activities
LVJ81_RS00460	COG0861	Integral membrane protein TerC family
LVJ81_RS00465	COG1960	acyl-CoA dehydrogenase activity
LVJ81_RS00485	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LVJ81_RS00490	COG1012	belongs to the aldehyde dehydrogenase family
LVJ81_RS00495	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LVJ81_RS00500	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LVJ81_RS00510	COG0306	phosphate transporter
LVJ81_RS00515	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LVJ81_RS00520	COG0581	inorganic phosphate transmembrane transporter activity
LVJ81_RS00530	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LVJ81_RS00540	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LVJ81_RS00550	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LVJ81_RS00570	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
LVJ81_RS00575	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
LVJ81_RS00585	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LVJ81_RS00625	COG1560	Kdo2-lipid A biosynthetic process
LVJ81_RS00640	COG0477	Major facilitator Superfamily
LVJ81_RS00670	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LVJ81_RS00670	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LVJ81_RS00700	COG0667	Aldo Keto reductase
LVJ81_RS00730	COG2159	amidohydrolase
LVJ81_RS00740	COG0583	DNA-binding transcription factor activity
LVJ81_RS00765	COG1333	cytochrome c biogenesis protein
LVJ81_RS00770	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LVJ81_RS00795	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
LVJ81_RS00820	COG1192	Involved in chromosome partitioning
LVJ81_RS00835	COG0356	it plays a direct role in the translocation of protons across the membrane
LVJ81_RS00870	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LVJ81_RS00875	COG2900	Belongs to the SlyX family
LVJ81_RS00880	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LVJ81_RS00890	COG1113	amino acid transport
LVJ81_RS00895	COG1648	precorrin-2 dehydrogenase activity
LVJ81_RS00895	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LVJ81_RS00915	COG0175	sulfate reduction
LVJ81_RS00920	COG2895	sulfate adenylyltransferase (ATP) activity
LVJ81_RS00925	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LVJ81_RS00955	COG0583	DNA-binding transcription factor activity
LVJ81_RS00965	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS00975	COG1757	Na H antiporter
LVJ81_RS00980	COG1012	belongs to the aldehyde dehydrogenase family
LVJ81_RS00990	COG0247	lactate metabolic process
LVJ81_RS00990	COG0277	FAD linked oxidase domain protein
LVJ81_RS00995	COG5383	Protein conserved in bacteria
LVJ81_RS01000	COG0697	spore germination
LVJ81_RS01005	COG0583	DNA-binding transcription factor activity
LVJ81_RS01010	COG0683	leucine binding
LVJ81_RS01065	COG0582	viral genome integration into host DNA
LVJ81_RS01075	COG2885	chlorophyll binding
LVJ81_RS01100	COG3545	Serine hydrolase
LVJ81_RS01110	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ81_RS01125	COG2860	membrane
LVJ81_RS01130	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LVJ81_RS01135	COG4771	TonB-dependent receptor
LVJ81_RS01140	COG4771	TonB-dependent receptor
LVJ81_RS01150	COG0545	Peptidyl-prolyl cis-trans isomerase
LVJ81_RS01175	COG0678	peroxiredoxin activity
LVJ81_RS01175	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LVJ81_RS01245	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LVJ81_RS01250	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LVJ81_RS01265	COG1194	a g-specific adenine glycosylase
LVJ81_RS01280	COG0039	L-malate dehydrogenase activity
LVJ81_RS01300	COG1053	succinate dehydrogenase
LVJ81_RS01305	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LVJ81_RS01310	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LVJ81_RS01320	COG0567	Dehydrogenase, E1 component
LVJ81_RS01325	COG0508	dehydrogenase complex catalyzes the overall conversion of
LVJ81_RS01335	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LVJ81_RS01345	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LVJ81_RS01350	COG4575	ribosome binding
LVJ81_RS01365	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ81_RS01370	COG1596	polysaccharide export
LVJ81_RS01380	COG0489	protein tyrosine kinase activity
LVJ81_RS01380	COG3206	protein involved in exopolysaccharide biosynthesis
LVJ81_RS01410	COG0308	aminopeptidase N
LVJ81_RS01415	COG0625	glutathione transferase activity
LVJ81_RS01420	COG4589	Belongs to the CDS family
LVJ81_RS01430	COG2267	carboxylic ester hydrolase activity
LVJ81_RS01435	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LVJ81_RS01440	COG2224	Isocitrate lyase
LVJ81_RS01480	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LVJ81_RS01485	COG0372	Belongs to the citrate synthase family
LVJ81_RS01490	COG2079	MmgE PrpD family protein
LVJ81_RS01495	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ81_RS01540	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LVJ81_RS01590	COG1902	pentaerythritol trinitrate reductase activity
LVJ81_RS01590	COG0446	pyridine nucleotide-disulphide oxidoreductase
LVJ81_RS01635	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LVJ81_RS01655	COG0024	Methionine aminopeptidase
LVJ81_RS01675	COG0312	modulator of DNA gyrase
LVJ81_RS01685	COG1505	serine-type exopeptidase activity
LVJ81_RS01710	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LVJ81_RS01725	COG1122	ATPase activity
LVJ81_RS01750	COG2354	Protein conserved in bacteria
LVJ81_RS01755	COG4535	Mg2 and Co2 transporter CorC
LVJ81_RS01770	COG1702	phosphate starvation-inducible protein PhoH
LVJ81_RS01775	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ81_RS01795	COG0326	Molecular chaperone. Has ATPase activity
LVJ81_RS01810	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LVJ81_RS01810	COG0321	lipoyl(octanoyl) transferase activity
LVJ81_RS01815	COG0084	hydrolase, TatD family'
LVJ81_RS01835	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LVJ81_RS01840	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LVJ81_RS01860	COG3313	Fe-S protein
LVJ81_RS01865	COG0697	spore germination
LVJ81_RS01870	COG0412	Dienelactone hydrolase
LVJ81_RS01895	COG2814	Major facilitator Superfamily
LVJ81_RS01910	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ81_RS01915	COG4558	Periplasmic binding protein
LVJ81_RS01925	COG4771	TonB-dependent receptor
LVJ81_RS01930	COG2329	Antibiotic biosynthesis monooxygenase
LVJ81_RS01945	COG0583	DNA-binding transcription factor activity
LVJ81_RS01955	COG1686	Belongs to the peptidase S11 family
LVJ81_RS01975	COG2839	Protein conserved in bacteria
LVJ81_RS01980	COG0431	NADPH-dependent FMN reductase
LVJ81_RS01985	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LVJ81_RS01995	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LVJ81_RS02000	COG1116	anion transmembrane transporter activity
LVJ81_RS02025	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LVJ81_RS02030	COG0105	UTP biosynthetic process
LVJ81_RS02075	COG2070	2-Nitropropane dioxygenase
LVJ81_RS02100	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LVJ81_RS02105	COG2096	Adenosyltransferase
LVJ81_RS02115	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LVJ81_RS02120	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LVJ81_RS02145	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LVJ81_RS02185	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LVJ81_RS02200	COG4245	von Willebrand factor, type A
LVJ81_RS02265	COG1358	cellular component organization or biogenesis
LVJ81_RS02285	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LVJ81_RS02305	COG0791	NLP P60 protein
LVJ81_RS02315	COG1741	Belongs to the pirin family
LVJ81_RS02320	COG1187	pseudouridine synthase activity
LVJ81_RS02350	COG0513	Belongs to the DEAD box helicase family
LVJ81_RS02385	COG0735	belongs to the Fur family
LVJ81_RS02390	COG0523	cobalamin synthesis protein
LVJ81_RS02395	COG1250	3-hydroxyacyl-CoA dehydrogenase
LVJ81_RS02400	COG2608	mercury ion transmembrane transporter activity
LVJ81_RS02410	COG0419	ATPase involved in DNA repair
LVJ81_RS02425	COG0592	DNA-directed DNA polymerase activity
LVJ81_RS02445	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LVJ81_RS02475	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LVJ81_RS02500	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LVJ81_RS02500	COG0519	Catalyzes the synthesis of GMP from XMP
LVJ81_RS02520	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LVJ81_RS02520	COG0519	Catalyzes the synthesis of GMP from XMP
LVJ81_RS02525	COG0174	glutamine synthetase
LVJ81_RS02530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ81_RS02550	COG0697	spore germination
LVJ81_RS02565	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LVJ81_RS02570	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LVJ81_RS02595	COG0659	secondary active sulfate transmembrane transporter activity
LVJ81_RS02615	COG1024	Enoyl-CoA hydratase
LVJ81_RS02620	COG1024	Enoyl-CoA hydratase
LVJ81_RS02625	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LVJ81_RS02630	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LVJ81_RS02665	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LVJ81_RS02685	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LVJ81_RS02735	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LVJ81_RS02745	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LVJ81_RS02755	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LVJ81_RS02760	COG4206	TonB-dependent receptor
LVJ81_RS02775	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LVJ81_RS02785	COG1448	Aminotransferase
LVJ81_RS02815	COG1530	ribonuclease E activity
LVJ81_RS02820	COG0424	maF-like protein
LVJ81_RS02825	COG0300	oxidoreductase activity
LVJ81_RS02835	COG1238	metal cluster binding
LVJ81_RS02850	COG1562	ergosterol biosynthetic process
LVJ81_RS02885	COG3186	Phenylalanine-4-hydroxylase
LVJ81_RS02890	COG2154	pterin-4-alpha-carbinolamine dehydratase
LVJ81_RS02900	COG1335	isochorismatase
LVJ81_RS02905	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LVJ81_RS02915	COG0004	ammonium transporteR
LVJ81_RS02920	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LVJ81_RS02925	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LVJ81_RS02940	COG0312	modulator of DNA gyrase
LVJ81_RS02950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS02990	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LVJ81_RS03025	COG1196	nuclear chromosome segregation
LVJ81_RS03025	COG0739	heme binding
LVJ81_RS03025	COG0741	lytic transglycosylase activity
LVJ81_RS03030	COG2814	Major facilitator Superfamily
LVJ81_RS03050	COG1534	Rna-binding protein
LVJ81_RS03055	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LVJ81_RS03060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LVJ81_RS03075	COG0586	Pfam SNARE associated Golgi protein
LVJ81_RS03095	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LVJ81_RS03140	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LVJ81_RS03145	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ81_RS03150	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ81_RS03165	COG0069	glutamate synthase activity
LVJ81_RS03195	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LVJ81_RS03210	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LVJ81_RS03220	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LVJ81_RS03225	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LVJ81_RS03230	COG1845	cytochrome c oxidase, subunit III
LVJ81_RS03235	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LVJ81_RS03265	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ81_RS03275	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LVJ81_RS03285	COG1546	Belongs to the CinA family
LVJ81_RS03285	COG1058	Belongs to the CinA family
LVJ81_RS03295	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LVJ81_RS03300	COG0802	atpase or kinase
LVJ81_RS03305	COG0860	N-Acetylmuramoyl-L-alanine amidase
LVJ81_RS03310	COG0297	glycogen (starch) synthase activity
LVJ81_RS03315	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LVJ81_RS03330	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LVJ81_RS03365	COG0572	uridine kinase
LVJ81_RS03375	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LVJ81_RS03390	COG0583	DNA-binding transcription factor activity
LVJ81_RS03400	COG0791	NLP P60 protein
LVJ81_RS03405	COG0488	(ABC) transporter
LVJ81_RS03420	COG0285	dihydrofolate synthase activity
LVJ81_RS03460	COG0307	riboflavin synthase, alpha
LVJ81_RS03465	COG1607	acyl-coa hydrolase
LVJ81_RS03470	COG0598	Magnesium transport protein CorA
LVJ81_RS03475	COG0248	Ppx GppA phosphatase
LVJ81_RS03480	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LVJ81_RS03500	COG2165	general secretion pathway protein
LVJ81_RS03510	COG2239	Acts as a magnesium transporter
LVJ81_RS03525	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LVJ81_RS03530	COG2807	transmembrane transport
LVJ81_RS03535	COG2207	Transcriptional regulator
LVJ81_RS03540	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LVJ81_RS03550	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LVJ81_RS03570	COG1252	NADH dehydrogenase
LVJ81_RS03590	COG0583	DNA-binding transcription factor activity
LVJ81_RS03605	COG1305	Transglutaminase-like
LVJ81_RS03615	COG2308	Evidence 4 Homologs of previously reported genes of
LVJ81_RS03625	COG0583	DNA-binding transcription factor activity
LVJ81_RS03630	COG1335	isochorismatase
LVJ81_RS03640	COG1063	alcohol dehydrogenase
LVJ81_RS03645	COG0402	S-adenosylhomocysteine deaminase activity
LVJ81_RS03655	COG1757	Na H antiporter
LVJ81_RS03680	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LVJ81_RS03715	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LVJ81_RS03730	COG0513	Belongs to the DEAD box helicase family
LVJ81_RS03795	COG0582	viral genome integration into host DNA
LVJ81_RS03825	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LVJ81_RS03840	COG1652	LysM domain
LVJ81_RS03845	COG0268	Binds directly to 16S ribosomal RNA
LVJ81_RS03875	COG2304	oxidoreductase activity
LVJ81_RS03880	COG2304	oxidoreductase activity
LVJ81_RS03910	COG1902	pentaerythritol trinitrate reductase activity
LVJ81_RS03910	COG0446	pyridine nucleotide-disulphide oxidoreductase
LVJ81_RS03945	COG0628	permease
LVJ81_RS03950	COG1295	ribonuclease BN
LVJ81_RS03960	COG0640	Transcriptional regulator
LVJ81_RS04000	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS04005	COG1464	Belongs to the NlpA lipoprotein family
LVJ81_RS04010	COG4608	Belongs to the ABC transporter superfamily
LVJ81_RS04015	COG0444	Belongs to the ABC transporter superfamily
LVJ81_RS04020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LVJ81_RS04025	COG0601	transmembrane transport
LVJ81_RS04030	COG0747	negative chemotaxis
LVJ81_RS04040	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LVJ81_RS04055	COG1137	ATPase activity
LVJ81_RS04060	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LVJ81_RS04070	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
LVJ81_RS04090	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LVJ81_RS04110	COG0140	phosphoribosyl-ATP diphosphatase activity
LVJ81_RS04125	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LVJ81_RS04130	COG0805	protein transport
LVJ81_RS04140	COG1619	proteins homologs of microcin C7 resistance protein MccF
LVJ81_RS04165	COG0287	Prephenate dehydrogenase
LVJ81_RS04175	COG0596	Alpha beta hydrolase
LVJ81_RS04185	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LVJ81_RS04195	COG5002	protein histidine kinase activity
LVJ81_RS04200	COG0745	RESPONSE REGULATOR receiver
LVJ81_RS04230	COG2959	enzyme of heme biosynthesis
LVJ81_RS04240	COG0730	response to heat
LVJ81_RS04245	COG4651	solute:proton antiporter activity
LVJ81_RS04245	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LVJ81_RS04255	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LVJ81_RS04260	COG1047	Peptidyl-prolyl cis-trans
LVJ81_RS04300	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LVJ81_RS04305	COG0569	domain protein
LVJ81_RS04310	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LVJ81_RS04310	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LVJ81_RS04350	COG0583	DNA-binding transcription factor activity
LVJ81_RS04370	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LVJ81_RS04385	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LVJ81_RS04390	COG0508	dehydrogenase complex catalyzes the overall conversion of
LVJ81_RS04405	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LVJ81_RS04415	COG0477	Major facilitator Superfamily
LVJ81_RS04430	COG1126	abc transporter atp-binding protein
LVJ81_RS04435	COG0765	amino acid transport
LVJ81_RS04440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ81_RS04485	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS04490	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LVJ81_RS04495	COG1012	belongs to the aldehyde dehydrogenase family
LVJ81_RS04505	COG2814	Major facilitator Superfamily
LVJ81_RS04510	COG2207	Transcriptional regulator
LVJ81_RS04515	COG4638	Rieske (2fe-2S)
LVJ81_RS04520	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
LVJ81_RS04525	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LVJ81_RS04525	COG0543	2 iron, 2 sulfur cluster binding
LVJ81_RS04530	COG4948	Mandelate Racemase Muconate Lactonizing
LVJ81_RS04535	COG4829	muconolactone delta-isomerase
LVJ81_RS04545	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LVJ81_RS04550	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LVJ81_RS04555	COG0183	Belongs to the thiolase family
LVJ81_RS04560	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ81_RS04570	COG0347	Belongs to the P(II) protein family
LVJ81_RS04575	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LVJ81_RS04585	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ81_RS04590	COG0765	amino acid transport
LVJ81_RS04600	COG0814	amino acid
LVJ81_RS04605	COG1414	Transcriptional regulator
LVJ81_RS04610	COG2610	gluconate transmembrane transporter activity
LVJ81_RS04615	COG1454	alcohol dehydrogenase
LVJ81_RS04625	COG3878	Protein conserved in bacteria
LVJ81_RS04640	COG1396	sequence-specific DNA binding
LVJ81_RS04645	COG3135	benzoate transporter
LVJ81_RS04655	COG2814	Major facilitator Superfamily
LVJ81_RS04660	COG4628	conserved protein (DUF2132)
LVJ81_RS04670	COG0633	Ferredoxin
LVJ81_RS04680	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LVJ81_RS04690	COG2070	2-Nitropropane dioxygenase
LVJ81_RS04700	COG0557	exoribonuclease II activity
LVJ81_RS04725	COG1610	YqeY-like protein
LVJ81_RS04735	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LVJ81_RS04740	COG1758	RNA polymerase activity
LVJ81_RS04755	COG3314	Sporulation integral membrane protein YlbJ
LVJ81_RS04905	COG3561	AntA/AntB antirepressor
LVJ81_RS04975	COG1278	Cold shock
LVJ81_RS05150	COG3561	AntA/AntB antirepressor
LVJ81_RS05215	COG0582	viral genome integration into host DNA
LVJ81_RS05265	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LVJ81_RS05280	COG2264	protein methyltransferase activity
LVJ81_RS05285	COG0439	Biotin carboxylase
LVJ81_RS05290	COG0511	ligase activity, forming carbon-carbon bonds
LVJ81_RS05295	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LVJ81_RS05315	COG2837	iron assimilation
LVJ81_RS05380	COG0195	Participates in both transcription termination and antitermination
LVJ81_RS05380	COG2251	uridine kinase activity
LVJ81_RS05400	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
LVJ81_RS05455	COG0697	spore germination
LVJ81_RS05460	COG2153	protein acetylation
LVJ81_RS05480	COG2995	paraquat-inducible protein a
LVJ81_RS05495	COG5510	response to toxic substance
LVJ81_RS05515	COG2813	Specifically methylates the guanine in position
LVJ81_RS05515	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ81_RS05525	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LVJ81_RS05535	COG5544	Lipoprotein
LVJ81_RS05545	COG4172	Belongs to the ABC transporter superfamily
LVJ81_RS05565	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LVJ81_RS05570	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LVJ81_RS05580	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LVJ81_RS05605	COG3949	Membrane
LVJ81_RS05615	COG2814	Major facilitator Superfamily
LVJ81_RS05620	COG1024	Enoyl-CoA hydratase
LVJ81_RS05625	COG1012	belongs to the aldehyde dehydrogenase family
LVJ81_RS05630	COG1022	Amp-dependent synthetase and ligase
LVJ81_RS05630	COG3320	Male sterility
LVJ81_RS05635	COG1960	acyl-CoA dehydrogenase activity
LVJ81_RS05645	COG0583	DNA-binding transcription factor activity
LVJ81_RS05655	COG1686	Belongs to the peptidase S11 family
LVJ81_RS05660	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LVJ81_RS05680	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LVJ81_RS05685	COG0386	Belongs to the glutathione peroxidase family
LVJ81_RS05720	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LVJ81_RS05730	COG3552	Protein containing von Willebrand factor type A (VWA) domain
LVJ81_RS05740	COG0714	Associated with various cellular activities
LVJ81_RS05765	COG4681	YaeQ
LVJ81_RS05785	COG2271	Major facilitator Superfamily
LVJ81_RS05800	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ81_RS05815	COG1671	Belongs to the UPF0178 family
LVJ81_RS05820	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LVJ81_RS05825	COG0493	'glutamate synthase
LVJ81_RS05830	COG0070	glutamate synthase
LVJ81_RS05830	COG0069	glutamate synthase activity
LVJ81_RS05830	COG0067	glutamate synthase
LVJ81_RS05840	COG0793	Belongs to the peptidase S41A family
LVJ81_RS05850	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LVJ81_RS05865	COG0659	secondary active sulfate transmembrane transporter activity
LVJ81_RS05890	COG0277	FAD linked oxidase domain protein
LVJ81_RS05905	COG0582	viral genome integration into host DNA
LVJ81_RS05915	COG4396	Host-nuclease inhibitor protein Gam
LVJ81_RS06210	COG1414	Transcriptional regulator
LVJ81_RS06215	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ81_RS06220	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LVJ81_RS06245	COG1053	succinate dehydrogenase
LVJ81_RS06255	COG2814	Major facilitator Superfamily
LVJ81_RS06260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS06275	COG0708	Exodeoxyribonuclease III
LVJ81_RS06295	COG3275	phosphorelay sensor kinase activity
LVJ81_RS06325	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LVJ81_RS06335	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LVJ81_RS06340	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LVJ81_RS06345	COG1187	pseudouridine synthase activity
LVJ81_RS06350	COG2873	o-acetylhomoserine
LVJ81_RS06365	COG0582	viral genome integration into host DNA
LVJ81_RS06390	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LVJ81_RS06420	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
LVJ81_RS06480	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LVJ81_RS06490	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LVJ81_RS06650	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LVJ81_RS06665	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LVJ81_RS06665	COG0446	pyridine nucleotide-disulphide oxidoreductase
LVJ81_RS06680	COG0788	formyltetrahydrofolate deformylase activity
LVJ81_RS06700	COG2835	tetraacyldisaccharide 4'-kinase activity
LVJ81_RS06715	COG0583	DNA-binding transcription factor activity
LVJ81_RS06730	COG3048	D-serine ammonia-lyase activity
LVJ81_RS06760	COG1294	oxidase, subunit
LVJ81_RS06775	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
LVJ81_RS06805	COG2833	Protein of unknown function (DUF455)
LVJ81_RS06810	COG4174	ABC transporter (Permease)
LVJ81_RS06815	COG4239	(ABC) transporter, permease
LVJ81_RS06820	COG3949	Membrane
LVJ81_RS06825	COG1120	ATPase activity
LVJ81_RS06830	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LVJ81_RS06840	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ81_RS06845	COG4615	Cyclic peptide transporter
LVJ81_RS06850	COG4615	Cyclic peptide transporter
LVJ81_RS06855	COG4774	siderophore transport
LVJ81_RS06870	COG2826	transposase and inactivated derivatives, IS30 family
LVJ81_RS06885	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ81_RS06890	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LVJ81_RS06910	COG0583	DNA-binding transcription factor activity
LVJ81_RS06915	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LVJ81_RS06920	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LVJ81_RS06935	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LVJ81_RS06945	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LVJ81_RS06965	COG0859	PFAM glycosyl transferase family 9
LVJ81_RS06970	COG0492	ferredoxin-NADP+ reductase activity
LVJ81_RS07000	COG0617	tRNA 3'-terminal CCA addition
LVJ81_RS07030	COG1032	radical SAM domain protein
LVJ81_RS07040	COG1408	metallophosphoesterase
LVJ81_RS07050	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ81_RS07060	COG0300	oxidoreductase activity
LVJ81_RS07070	COG0235	Class ii aldolase
LVJ81_RS07075	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ81_RS07080	COG1177	transmembrane transport
LVJ81_RS07085	COG1176	ABC-type spermidine putrescine transport system, permease component I
LVJ81_RS07090	COG3842	ATPase activity
LVJ81_RS07110	COG1802	Transcriptional regulator
LVJ81_RS07115	COG1187	pseudouridine synthase activity
LVJ81_RS07140	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LVJ81_RS07145	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LVJ81_RS07150	COG1561	YicC-like family, N-terminal region
LVJ81_RS07170	COG2217	Heavy metal translocating P-type atpase
LVJ81_RS07185	COG0393	Putative heavy-metal-binding
LVJ81_RS07190	COG0393	Putative heavy-metal-binding
LVJ81_RS07200	COG0704	Plays a role in the regulation of phosphate uptake
LVJ81_RS07210	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LVJ81_RS07230	COG4166	transmembrane transport
LVJ81_RS07240	COG1970	mechanosensitive ion channel activity
LVJ81_RS07245	COG0494	nUDIX hydrolase
LVJ81_RS07250	COG3243	poly(R)-hydroxyalkanoic acid synthase
LVJ81_RS07255	COG0183	Belongs to the thiolase family
LVJ81_RS07270	COG0133	tryptophan synthase activity
LVJ81_RS07290	COG1584	GPR1 FUN34 yaaH family protein
LVJ81_RS07300	COG2986	histidine ammonia-lyase
LVJ81_RS07315	COG0010	Belongs to the arginase family
LVJ81_RS07325	COG2081	HI0933 family
LVJ81_RS07330	COG2304	oxidoreductase activity
LVJ81_RS07335	COG1643	Atp-dependent helicase
LVJ81_RS07365	COG4772	TonB-dependent receptor
LVJ81_RS07370	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ81_RS07375	COG4605	iron ion homeostasis
LVJ81_RS07380	COG4604	ABC transporter, ATP-binding protein
LVJ81_RS07385	COG4607	ABC-type enterochelin transport system periplasmic component
LVJ81_RS07400	COG3384	dioxygenase
LVJ81_RS07420	COG2814	Major facilitator Superfamily
LVJ81_RS07425	COG0833	amino acid
LVJ81_RS07430	COG0826	peptidase U32
LVJ81_RS07450	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LVJ81_RS07460	COG3454	Phosphonate metabolism
LVJ81_RS07465	COG4778	phosphonate C-P lyase system protein PhnL
LVJ81_RS07470	COG4107	phosphonate C-P lyase system protein PhnK
LVJ81_RS07475	COG3627	carbon phosphorus lyase activity
LVJ81_RS07480	COG3626	phosphonate metabolism
LVJ81_RS07490	COG3624	Phosphonate C-P lyase system protein PhnG
LVJ81_RS07495	COG3639	organic phosphonate transmembrane transporter activity
LVJ81_RS07500	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LVJ81_RS07520	COG2233	PERMEase
LVJ81_RS07530	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LVJ81_RS07550	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LVJ81_RS07565	COG0408	coproporphyrinogen oxidase activity
LVJ81_RS07575	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LVJ81_RS07580	COG1121	(ABC) transporter
LVJ81_RS07590	COG2841	Protein conserved in bacteria
LVJ81_RS07615	COG0006	proline dipeptidase activity
LVJ81_RS07655	COG2866	Carboxypeptidase
LVJ81_RS07660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LVJ81_RS07755	COG1187	pseudouridine synthase activity
LVJ81_RS07790	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LVJ81_RS07795	COG0440	acetolactate synthase activity
LVJ81_RS07800	COG0028	Belongs to the TPP enzyme family
LVJ81_RS07835	COG2171	N-acyltransferase activity
LVJ81_RS07840	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LVJ81_RS07880	COG2878	Part of a membrane complex involved in electron transport
LVJ81_RS07900	COG0714	Associated with various cellular activities
LVJ81_RS07950	COG1982	Orn Lys Arg decarboxylase major
LVJ81_RS07960	COG2967	ApaG domain
LVJ81_RS07965	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LVJ81_RS07990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS07990	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LVJ81_RS08000	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ81_RS08010	COG2321	neutral zinc metallopeptidase
LVJ81_RS08025	COG2267	carboxylic ester hydrolase activity
LVJ81_RS08040	COG0506	proline dehydrogenase activity
LVJ81_RS08040	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LVJ81_RS08040	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LVJ81_RS08045	COG0477	Major facilitator Superfamily
LVJ81_RS08055	COG1132	(ABC) transporter
LVJ81_RS08065	COG2431	L-lysine efflux transmembrane transporter activity
LVJ81_RS08075	COG1132	(ABC) transporter
LVJ81_RS08090	COG0859	PFAM glycosyl transferase family 9
LVJ81_RS08095	COG0427	acetyl-CoA hydrolase
LVJ81_RS08100	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LVJ81_RS08110	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ81_RS08115	COG2824	Alkylphosphonate utilization operon protein PhnA
LVJ81_RS08140	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LVJ81_RS08145	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LVJ81_RS08155	COG0583	DNA-binding transcription factor activity
LVJ81_RS08160	COG0436	Aminotransferase
LVJ81_RS08190	COG0084	hydrolase, TatD family'
LVJ81_RS08200	COG0010	Belongs to the arginase family
LVJ81_RS08220	COG0488	(ABC) transporter
LVJ81_RS08240	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LVJ81_RS08245	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LVJ81_RS08275	COG2733	membrane
LVJ81_RS08295	COG3135	benzoate transporter
LVJ81_RS08300	COG3842	ATPase activity
LVJ81_RS08305	COG1176	ABC-type spermidine putrescine transport system, permease component I
LVJ81_RS08310	COG1177	transmembrane transport
LVJ81_RS08315	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ81_RS08325	COG1115	amino acid carrier protein
LVJ81_RS08340	COG3012	SEC-C Motif Domain Protein
LVJ81_RS08345	COG1538	Outer membrane efflux protein
LVJ81_RS08365	COG0251	oxidation-reduction process
LVJ81_RS08375	COG3040	lipid binding
LVJ81_RS08385	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LVJ81_RS08390	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LVJ81_RS08395	COG2951	lytic endotransglycosylase activity
LVJ81_RS08405	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LVJ81_RS08420	COG1511	domain protein
LVJ81_RS08420	COG3264	Mechanosensitive ion channel
LVJ81_RS08425	COG0494	nUDIX hydrolase
LVJ81_RS08430	COG3568	Endonuclease Exonuclease Phosphatase
LVJ81_RS08435	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LVJ81_RS08440	COG2011	ABC-type metal ion transport system permease component
LVJ81_RS08445	COG1464	Belongs to the NlpA lipoprotein family
LVJ81_RS08455	COG0330	HflC and HflK could
LVJ81_RS08465	COG2962	Rard protein
LVJ81_RS08475	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LVJ81_RS08495	COG1114	Component of the transport system for branched-chain amino acids
LVJ81_RS08545	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LVJ81_RS08550	COG1074	ATP-dependent DNA helicase activity
LVJ81_RS08565	COG1414	Transcriptional regulator
LVJ81_RS08570	COG0513	Belongs to the DEAD box helicase family
LVJ81_RS08575	COG2186	Transcriptional regulator
LVJ81_RS08580	COG0247	lactate metabolic process
LVJ81_RS08590	COG1139	Iron-sulfur cluster binding protein
LVJ81_RS08595	COG1620	l-lactate permease
LVJ81_RS08600	COG1304	FMN binding
LVJ81_RS08620	COG4783	chaperone-mediated protein folding
LVJ81_RS08630	COG0129	dihydroxy-acid dehydratase activity
LVJ81_RS08645	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LVJ81_RS08660	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LVJ81_RS08680	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LVJ81_RS08685	COG1077	Cell shape determining protein MreB Mrl
LVJ81_RS08690	COG1792	Involved in formation and maintenance of cell shape
LVJ81_RS08700	COG0768	penicillin binding
LVJ81_RS08705	COG0772	Belongs to the SEDS family
LVJ81_RS08720	COG3318	Belongs to the UPF0149 family
LVJ81_RS08720	COG3012	SEC-C Motif Domain Protein
LVJ81_RS08725	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LVJ81_RS08745	COG0497	DNA recombination
LVJ81_RS08755	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
LVJ81_RS08760	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LVJ81_RS08770	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LVJ81_RS08785	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LVJ81_RS08790	COG1297	OPT oligopeptide transporter protein
LVJ81_RS08800	COG2233	PERMEase
LVJ81_RS08805	COG1012	belongs to the aldehyde dehydrogenase family
LVJ81_RS08825	COG4208	sulfate ABC transporter
LVJ81_RS08840	COG1496	oxidoreductase activity
LVJ81_RS08870	COG1388	LysM domain
LVJ81_RS08870	COG0741	lytic transglycosylase activity
LVJ81_RS08875	COG1760	l-serine dehydratase
LVJ81_RS08895	COG0512	Glutamine amidotransferase of anthranilate synthase
LVJ81_RS08915	COG1393	Belongs to the ArsC family
LVJ81_RS08920	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LVJ81_RS08960	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LVJ81_RS08970	COG0351	phosphomethylpyrimidine kinase
LVJ81_RS08970	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LVJ81_RS08970	COG0352	thiamine-phosphate diphosphorylase activity
LVJ81_RS09005	COG0433	COG0433 Predicted ATPase
LVJ81_RS09010	COG1309	transcriptional regulator
LVJ81_RS09025	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LVJ81_RS09070	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LVJ81_RS09105	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LVJ81_RS09110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LVJ81_RS09115	COG0586	Pfam SNARE associated Golgi protein
LVJ81_RS09160	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LVJ81_RS09165	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LVJ81_RS09185	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LVJ81_RS09200	COG5266	PFAM Nickel transport complex, NikM subunit, transmembrane
LVJ81_RS09210	COG0488	(ABC) transporter
LVJ81_RS09225	COG0252	asparaginase activity
LVJ81_RS09235	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LVJ81_RS09240	COG1116	anion transmembrane transporter activity
LVJ81_RS09245	COG1773	rubredoxin
LVJ81_RS09295	COG1113	amino acid transport
LVJ81_RS09310	COG1522	sequence-specific DNA binding
LVJ81_RS09315	COG1047	Peptidyl-prolyl cis-trans
LVJ81_RS09325	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LVJ81_RS09330	COG1217	gtp-binding protein TYPA
LVJ81_RS09350	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LVJ81_RS09400	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LVJ81_RS09405	COG0628	permease
LVJ81_RS09440	COG0012	GTP binding
LVJ81_RS09460	COG1428	Deoxynucleoside kinase
LVJ81_RS09465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LVJ81_RS09470	COG0617	tRNA 3'-terminal CCA addition
LVJ81_RS09480	COG4122	O-methyltransferase activity
LVJ81_RS09490	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LVJ81_RS09495	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LVJ81_RS09510	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LVJ81_RS09515	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ81_RS09525	COG0123	including yeast histone deacetylase and acetoin utilization protein
LVJ81_RS09530	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LVJ81_RS09575	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LVJ81_RS09590	COG0277	FAD linked oxidase domain protein
LVJ81_RS09595	COG0277	FAD linked oxidase domain protein
LVJ81_RS09600	COG0247	lactate metabolic process
LVJ81_RS09610	COG3193	protein, possibly involved in utilization of glycolate and propanediol
LVJ81_RS09615	COG0784	Response regulator, receiver
LVJ81_RS09615	COG2205	protein histidine kinase activity
LVJ81_RS09630	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LVJ81_RS09650	COG0386	Belongs to the glutathione peroxidase family
LVJ81_RS09660	COG0560	Phosphoserine phosphatase
LVJ81_RS09675	COG0822	iron-sulfur transferase activity
LVJ81_RS09695	COG0633	Ferredoxin
LVJ81_RS09700	COG2975	iron-sulfur cluster assembly
LVJ81_RS09710	COG0840	transmembrane signaling receptor activity
LVJ81_RS09750	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LVJ81_RS09775	COG1902	pentaerythritol trinitrate reductase activity
LVJ81_RS09790	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LVJ81_RS09800	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LVJ81_RS09845	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LVJ81_RS09850	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LVJ81_RS09860	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LVJ81_RS09875	COG0544	peptidyl-prolyl cis-trans isomerase activity
LVJ81_RS09895	COG0534	Mate efflux family protein
LVJ81_RS09920	COG1765	OsmC-like protein
LVJ81_RS09925	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LVJ81_RS09935	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LVJ81_RS09945	COG0542	response to heat
LVJ81_RS09955	COG0643	Histidine kinase
LVJ81_RS09955	COG2198	Histidine kinase
LVJ81_RS09975	COG2027	D-alanyl-D-alanine carboxypeptidase
LVJ81_RS09980	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LVJ81_RS09985	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ81_RS10005	COG1183	phosphatidylcholine synthase activity
LVJ81_RS10010	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LVJ81_RS10025	COG0351	phosphomethylpyrimidine kinase
LVJ81_RS10030	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LVJ81_RS10040	COG1234	tRNA 3'-trailer cleavage
LVJ81_RS10055	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LVJ81_RS10075	COG5592	hemerythrin HHE cation binding domain
LVJ81_RS10080	COG2133	pyrroloquinoline quinone binding
LVJ81_RS10090	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LVJ81_RS10105	COG0135	phosphoribosylanthranilate isomerase activity
LVJ81_RS10115	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LVJ81_RS10130	COG0166	Belongs to the GPI family
LVJ81_RS10135	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LVJ81_RS10140	COG0501	Belongs to the peptidase M48B family
LVJ81_RS10165	COG2350	Protein conserved in bacteria
LVJ81_RS10175	COG0402	S-adenosylhomocysteine deaminase activity
LVJ81_RS10185	COG0254	rRNA binding
LVJ81_RS10210	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LVJ81_RS10215	COG0142	geranyltranstransferase activity
LVJ81_RS10275	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LVJ81_RS10275	COG1199	ATP-dependent helicase activity
LVJ81_RS10295	COG0488	(ABC) transporter
LVJ81_RS10315	COG0765	amino acid transport
LVJ81_RS10320	COG0196	riboflavin kinase activity
LVJ81_RS10335	COG0859	PFAM glycosyl transferase family 9
LVJ81_RS10345	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LVJ81_RS10360	COG2326	polyphosphate kinase activity
LVJ81_RS10365	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LVJ81_RS10375	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LVJ81_RS10375	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ81_RS10380	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LVJ81_RS10405	COG1278	Cold shock
LVJ81_RS10425	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LVJ81_RS10440	COG1683	Conserved Protein
LVJ81_RS10450	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LVJ81_RS10475	COG0756	dUTP diphosphatase activity
LVJ81_RS10485	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ81_RS10490	COG2814	Major facilitator Superfamily
LVJ81_RS10505	COG2826	transposase and inactivated derivatives, IS30 family
LVJ81_RS10510	COG2826	transposase and inactivated derivatives, IS30 family
LVJ81_RS10560	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LVJ81_RS10575	COG0590	tRNA wobble adenosine to inosine editing
LVJ81_RS10580	COG0387	Pfam Sodium calcium exchanger
LVJ81_RS10600	COG3411	Ferredoxin
LVJ81_RS10630	COG0745	RESPONSE REGULATOR receiver
LVJ81_RS10635	COG2205	protein histidine kinase activity
LVJ81_RS10650	COG0121	glutamine amidotransferase
LVJ81_RS10660	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LVJ81_RS10670	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ81_RS10670	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ81_RS10675	COG1088	dTDP-glucose 4,6-dehydratase activity
LVJ81_RS10680	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LVJ81_RS10745	COG0438	transferase activity, transferring glycosyl groups
LVJ81_RS10750	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LVJ81_RS10760	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LVJ81_RS10780	COG1968	undecaprenyl-diphosphatase activity
LVJ81_RS10845	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LVJ81_RS10850	COG0183	Belongs to the thiolase family
LVJ81_RS10855	COG1024	Enoyl-CoA hydratase
LVJ81_RS10855	COG1250	3-hydroxyacyl-CoA dehydrogenase
LVJ81_RS10865	COG1960	acyl-CoA dehydrogenase activity
LVJ81_RS10880	COG1063	alcohol dehydrogenase
LVJ81_RS10910	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LVJ81_RS10950	COG0589	response to stress
LVJ81_RS11050	COG0528	UMP kinase activity
LVJ81_RS11055	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LVJ81_RS11060	COG0052	Belongs to the universal ribosomal protein uS2 family
LVJ81_RS11065	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LVJ81_RS11095	COG0564	pseudouridine synthase activity
LVJ81_RS11115	COG2095	MarC family integral membrane protein
LVJ81_RS11130	COG1959	2 iron, 2 sulfur cluster binding
LVJ81_RS11170	COG1530	ribonuclease E activity
LVJ81_RS11175	COG0564	pseudouridine synthase activity
LVJ81_RS11180	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LVJ81_RS11185	COG0616	signal peptide processing
LVJ81_RS11185	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LVJ81_RS11195	COG1346	cytolysis
LVJ81_RS11225	COG2969	positive regulation of protein catabolic process
LVJ81_RS11230	COG0625	glutathione transferase activity
LVJ81_RS11280	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LVJ81_RS11300	COG3766	membrane
LVJ81_RS11305	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LVJ81_RS11345	COG0477	Major facilitator Superfamily
LVJ81_RS11415	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LVJ81_RS11450	COG2715	membrane protein required for spore maturation
LVJ81_RS11455	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LVJ81_RS11460	COG1113	amino acid transport
LVJ81_RS11465	COG1126	abc transporter atp-binding protein
LVJ81_RS11470	COG0765	amino acid transport
LVJ81_RS11475	COG0765	amino acid transport
LVJ81_RS11520	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LVJ81_RS11530	COG0201	protein transport
LVJ81_RS11535	COG0200	Binds to the 23S rRNA
LVJ81_RS11595	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LVJ81_RS11600	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LVJ81_RS11725	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LVJ81_RS11730	COG0742	ribosomal rna small subunit methyltransferase
LVJ81_RS11735	COG2204	response regulator
LVJ81_RS11740	COG5000	phosphorelay sensor kinase activity
LVJ81_RS11750	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LVJ81_RS11750	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ81_RS11755	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LVJ81_RS11765	COG1652	LysM domain
LVJ81_RS11770	COG0758	DNA mediated transformation
LVJ81_RS11785	COG1869	D-ribose catabolic process
LVJ81_RS11795	COG1172	Belongs to the binding-protein-dependent transport system permease family
LVJ81_RS11800	COG1879	ABC-type sugar transport system periplasmic component
LVJ81_RS11805	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LVJ81_RS11810	COG0745	RESPONSE REGULATOR receiver
LVJ81_RS11815	COG5002	protein histidine kinase activity
LVJ81_RS11820	COG2030	dehydratase
LVJ81_RS11845	COG0799	negative regulation of ribosome biogenesis
LVJ81_RS11855	COG0288	reversible hydration of carbon dioxide
LVJ81_RS11865	COG0643	Histidine kinase
LVJ81_RS11865	COG2198	Histidine kinase
LVJ81_RS11870	COG2201	protein-glutamate methylesterase activity
LVJ81_RS11880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ81_RS11905	COG0739	heme binding
LVJ81_RS11920	COG1280	lysine exporter protein (LysE YggA)
LVJ81_RS11955	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LVJ81_RS12000	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LVJ81_RS12010	COG2814	Major facilitator Superfamily
LVJ81_RS12025	COG4682	membrane
LVJ81_RS12030	COG0509	glycine decarboxylation via glycine cleavage system
LVJ81_RS12050	COG2832	Protein of unknown function (DUF454)
LVJ81_RS12055	COG0788	formyltetrahydrofolate deformylase activity
LVJ81_RS12065	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LVJ81_RS12080	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LVJ81_RS12125	COG1956	GAF domain-containing protein
LVJ81_RS12135	COG3128	pkhd-type hydroxylase
LVJ81_RS12140	COG4774	siderophore transport
LVJ81_RS12155	COG1247	-acetyltransferase
LVJ81_RS12200	COG1519	Transferase
LVJ81_RS12220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LVJ81_RS12225	COG0489	protein tyrosine kinase activity
LVJ81_RS12255	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LVJ81_RS12270	COG1040	competence protein
LVJ81_RS12280	COG2226	methyltransferase
LVJ81_RS12285	COG1752	Esterase of the alpha-beta hydrolase superfamily
LVJ81_RS12300	COG3237	CsbD-like
LVJ81_RS12305	COG4221	oxidoreductase activity
LVJ81_RS12310	COG0583	DNA-binding transcription factor activity
LVJ81_RS12315	COG2259	Doxx family
LVJ81_RS12320	COG1132	(ABC) transporter
LVJ81_RS12335	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LVJ81_RS12340	COG0436	Aminotransferase
LVJ81_RS12370	COG1199	ATP-dependent helicase activity
LVJ81_RS12390	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LVJ81_RS12400	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LVJ81_RS12430	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LVJ81_RS12445	COG1981	membrane
LVJ81_RS12470	COG0514	ATP-dependent DNA helicase (RecQ)
LVJ81_RS12480	COG1994	Peptidase M50
LVJ81_RS12485	COG0009	L-threonylcarbamoyladenylate synthase
LVJ81_RS12490	COG0613	PHP domain protein
LVJ81_RS12510	COG1742	UPF0060 membrane protein
LVJ81_RS12515	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LVJ81_RS12530	COG1011	Hydrolase
LVJ81_RS12535	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LVJ81_RS12550	COG0625	glutathione transferase activity
LVJ81_RS12555	COG1166	arginine decarboxylase activity
LVJ81_RS12565	COG0646	methionine synthase
LVJ81_RS12565	COG1410	methionine synthase
LVJ81_RS12580	COG0656	L-ascorbic acid biosynthetic process
LVJ81_RS12585	COG3279	Response regulator of the LytR AlgR family
LVJ81_RS12600	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LVJ81_RS12620	COG2962	Rard protein
LVJ81_RS12635	COG0210	DNA helicase
LVJ81_RS12655	COG2119	membrane
LVJ81_RS12680	COG1739	Uncharacterized protein family UPF0029
LVJ81_RS12695	COG2086	electron transfer activity
LVJ81_RS12700	COG0859	PFAM glycosyl transferase family 9
LVJ81_RS12720	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LVJ81_RS12725	COG1272	protein, Hemolysin III
LVJ81_RS12750	COG0612	Peptidase, M16
LVJ81_RS12765	COG2884	Cell division ATP-binding protein ftsE
LVJ81_RS12775	COG2364	Membrane
LVJ81_RS12815	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LVJ81_RS12840	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LVJ81_RS12875	COG0557	exoribonuclease II activity
LVJ81_RS12915	COG1401	restriction endodeoxyribonuclease activity
LVJ81_RS13045	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LVJ81_RS13050	COG2207	Transcriptional regulator