locus-tag class description AKJ08_RS00005 PF02637 GatB domain AKJ08_RS00005 PF02934 GatB/GatE catalytic domain AKJ08_RS00020 PF00829 Ribosomal prokaryotic L21 protein AKJ08_RS00025 PF01016 Ribosomal L27 protein AKJ08_RS00030 PF01018 GTP1/OBG AKJ08_RS00030 PF01926 50S ribosome-binding GTPase AKJ08_RS00045 PF00459 Inositol monophosphatase family AKJ08_RS00050 PF04055 Radical SAM superfamily AKJ08_RS00050 PF18693 TRAM domain AKJ08_RS00050 PF00919 Uncharacterized protein family UPF0004 AKJ08_RS00055 PF04461 Protein of unknown function (DUF520) AKJ08_RS00060 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AKJ08_RS00060 PF17770 Ribonuclease J C-terminal domain AKJ08_RS00060 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS00075 PF00207 Alpha-2-macroglobulin family AKJ08_RS00075 PF07703 Alpha-2-macroglobulin bait region domain AKJ08_RS00075 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AKJ08_RS00075 PF01835 MG2 domain AKJ08_RS00080 PF01835 MG2 domain AKJ08_RS00080 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AKJ08_RS00080 PF07703 Alpha-2-macroglobulin bait region domain AKJ08_RS00080 PF00207 Alpha-2-macroglobulin family AKJ08_RS00085 PF00580 UvrD/REP helicase N-terminal domain AKJ08_RS00085 PF13361 UvrD-like helicase C-terminal domain AKJ08_RS00100 PF00483 Nucleotidyl transferase AKJ08_RS00115 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS00125 PF08323 Starch synthase catalytic domain AKJ08_RS00125 PF00534 Glycosyl transferases group 1 AKJ08_RS00130 PF03471 Transporter associated domain AKJ08_RS00130 PF00571 CBS domain AKJ08_RS00135 PF05547 Immune inhibitor A peptidase M6 AKJ08_RS00135 PF00801 PKD domain AKJ08_RS00140 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AKJ08_RS00150 PF00586 AIR synthase related protein, N-terminal domain AKJ08_RS00150 PF02769 AIR synthase related protein, C-terminal domain AKJ08_RS00150 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AKJ08_RS00160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AKJ08_RS00160 PF00586 AIR synthase related protein, N-terminal domain AKJ08_RS00160 PF02769 AIR synthase related protein, C-terminal domain AKJ08_RS00190 PF13276 HTH-like domain AKJ08_RS00190 PF00665 Integrase core domain AKJ08_RS00190 PF13333 Integrase core domain AKJ08_RS00195 PF05547 Immune inhibitor A peptidase M6 AKJ08_RS00195 PF00801 PKD domain AKJ08_RS00200 PF00801 PKD domain AKJ08_RS00200 PF05547 Immune inhibitor A peptidase M6 AKJ08_RS00220 PF00156 Phosphoribosyl transferase domain AKJ08_RS00225 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AKJ08_RS00225 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AKJ08_RS00235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AKJ08_RS00235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AKJ08_RS00235 PF10531 SLBB domain AKJ08_RS00240 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AKJ08_RS00245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AKJ08_RS00250 PF00361 Proton-conducting membrane transporter AKJ08_RS00250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AKJ08_RS00255 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AKJ08_RS00255 PF00361 Proton-conducting membrane transporter AKJ08_RS00260 PF00361 Proton-conducting membrane transporter AKJ08_RS00270 PF00158 Sigma-54 interaction domain AKJ08_RS00270 PF00072 Response regulator receiver domain AKJ08_RS00270 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS00275 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS00280 PF00156 Phosphoribosyl transferase domain AKJ08_RS00285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKJ08_RS00285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AKJ08_RS00290 PF01430 Hsp33 protein AKJ08_RS00320 PF02403 Seryl-tRNA synthetase N-terminal domain AKJ08_RS00320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKJ08_RS00340 PF14437 MafB19-like deaminase AKJ08_RS00355 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AKJ08_RS00355 PF12170 DNA polymerase III tau subunit V interacting with alpha AKJ08_RS00355 PF12169 DNA polymerase III subunits gamma and tau domain III AKJ08_RS00360 PF02575 YbaB/EbfC DNA-binding family AKJ08_RS00365 PF00633 Helix-hairpin-helix motif AKJ08_RS00365 PF02132 RecR protein AKJ08_RS00365 PF13662 Toprim domain AKJ08_RS00375 PF11941 Domain of unknown function (DUF3459) AKJ08_RS00375 PF00128 Alpha amylase, catalytic domain AKJ08_RS00380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKJ08_RS00385 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AKJ08_RS00385 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AKJ08_RS00385 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AKJ08_RS00415 PF17946 RecC C-terminal domain AKJ08_RS00420 PF12705 PD-(D/E)XK nuclease superfamily AKJ08_RS00420 PF00580 UvrD/REP helicase N-terminal domain AKJ08_RS00420 PF13361 UvrD-like helicase C-terminal domain AKJ08_RS00425 PF13538 UvrD-like helicase C-terminal domain AKJ08_RS00440 PF12706 Beta-lactamase superfamily domain AKJ08_RS00445 PF09335 SNARE associated Golgi protein AKJ08_RS00465 PF00691 OmpA family AKJ08_RS00465 PF13677 Membrane MotB of proton-channel complex MotA/MotB AKJ08_RS00470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKJ08_RS00470 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AKJ08_RS00475 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AKJ08_RS00485 PF00171 Aldehyde dehydrogenase family AKJ08_RS00490 PF00535 Glycosyl transferase family 2 AKJ08_RS00495 PF00884 Sulfatase AKJ08_RS00500 PF00343 Carbohydrate phosphorylase AKJ08_RS00500 PF11897 Protein of unknown function (DUF3417) AKJ08_RS00505 PF00171 Aldehyde dehydrogenase family AKJ08_RS00510 PF00072 Response regulator receiver domain AKJ08_RS00510 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS00550 PF02261 Aspartate decarboxylase AKJ08_RS00555 PF01470 Pyroglutamyl peptidase AKJ08_RS00580 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS00625 PF01207 Dihydrouridine synthase (Dus) AKJ08_RS00630 PF03649 Uncharacterised protein family (UPF0014) AKJ08_RS00635 PF00005 ABC transporter AKJ08_RS00645 PF00437 Type II/IV secretion system protein AKJ08_RS00650 PF01039 Carboxyl transferase domain AKJ08_RS00655 PF01642 Methylmalonyl-CoA mutase AKJ08_RS00660 PF01642 Methylmalonyl-CoA mutase AKJ08_RS00660 PF02310 B12 binding domain AKJ08_RS00670 PF13493 Domain of unknown function (DUF4118) AKJ08_RS00670 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS00670 PF13492 GAF domain AKJ08_RS00670 PF02702 Osmosensitive K+ channel His kinase sensor domain AKJ08_RS00675 PF02669 K+-transporting ATPase, c chain AKJ08_RS00685 PF03814 Potassium-transporting ATPase A subunit AKJ08_RS00690 PF00289 Biotin carboxylase, N-terminal domain AKJ08_RS00690 PF02785 Biotin carboxylase C-terminal domain AKJ08_RS00690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKJ08_RS00695 PF00364 Biotin-requiring enzyme AKJ08_RS00730 PF05681 Fumarate hydratase (Fumerase) AKJ08_RS00730 PF05683 Fumarase C-terminus AKJ08_RS00735 PF05681 Fumarate hydratase (Fumerase) AKJ08_RS00735 PF05683 Fumarase C-terminus AKJ08_RS00740 PF00365 Phosphofructokinase AKJ08_RS00745 PF01479 S4 domain AKJ08_RS00745 PF00849 RNA pseudouridylate synthase AKJ08_RS00750 PF01743 Poly A polymerase head domain AKJ08_RS00750 PF12626 Polymerase A arginine-rich C-terminus AKJ08_RS00750 PF12627 Probable RNA and SrmB- binding site of polymerase A AKJ08_RS00760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AKJ08_RS00760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AKJ08_RS00765 PF18324 Hypothetical protein TT1725 AKJ08_RS00765 PF00180 Isocitrate/isopropylmalate dehydrogenase AKJ08_RS00770 PF08669 Glycine cleavage T-protein C-terminal barrel domain AKJ08_RS00770 PF01571 Aminomethyltransferase folate-binding domain AKJ08_RS00800 PF00202 Aminotransferase class-III AKJ08_RS00805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AKJ08_RS00805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AKJ08_RS00815 PF00801 PKD domain AKJ08_RS00815 PF00759 Glycosyl hydrolase family 9 AKJ08_RS00815 PF02927 Cellulase N-terminal ig-like domain AKJ08_RS00815 PF02013 Cellulose or protein binding domain AKJ08_RS00815 PF00553 Cellulose binding domain AKJ08_RS00825 PF00684 DnaJ central domain AKJ08_RS00825 PF01556 DnaJ C terminal domain AKJ08_RS00825 PF00226 DnaJ domain AKJ08_RS00830 PF00012 Hsp70 protein AKJ08_RS00845 PF13193 AMP-binding enzyme C-terminal domain AKJ08_RS00845 PF00668 Condensation domain AKJ08_RS00845 PF07993 Male sterility protein AKJ08_RS00845 PF00550 Phosphopantetheine attachment site AKJ08_RS00845 PF00501 AMP-binding enzyme AKJ08_RS00850 PF01121 Dephospho-CoA kinase AKJ08_RS00855 PF01926 50S ribosome-binding GTPase AKJ08_RS00915 PF03449 Transcription elongation factor, N-terminal AKJ08_RS00915 PF01272 Transcription elongation factor, GreA/GreB, C-term AKJ08_RS00935 PF00684 DnaJ central domain AKJ08_RS00935 PF01556 DnaJ C terminal domain AKJ08_RS00935 PF00226 DnaJ domain AKJ08_RS00940 PF08486 Stage II sporulation protein AKJ08_RS00960 PF02347 Glycine cleavage system P-protein AKJ08_RS00965 PF01597 Glycine cleavage H-protein AKJ08_RS00970 PF08669 Glycine cleavage T-protein C-terminal barrel domain AKJ08_RS00970 PF01571 Aminomethyltransferase folate-binding domain AKJ08_RS00975 PF13173 AAA domain AKJ08_RS00975 PF13635 Domain of unknown function (DUF4143) AKJ08_RS00980 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AKJ08_RS00980 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AKJ08_RS01015 PF00578 AhpC/TSA family AKJ08_RS01020 PF01578 Cytochrome C assembly protein AKJ08_RS01020 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AKJ08_RS01025 PF03100 CcmE AKJ08_RS01030 PF01578 Cytochrome C assembly protein AKJ08_RS01040 PF00005 ABC transporter AKJ08_RS01045 PF01625 Peptide methionine sulfoxide reductase AKJ08_RS01055 PF00348 Polyprenyl synthetase AKJ08_RS01060 PF01209 ubiE/COQ5 methyltransferase family AKJ08_RS01065 PF02441 Flavoprotein AKJ08_RS01075 PF04055 Radical SAM superfamily AKJ08_RS01080 PF04055 Radical SAM superfamily AKJ08_RS01090 PF01040 UbiA prenyltransferase family AKJ08_RS01095 PF18152 DAHP synthase ferredoxin-like domain AKJ08_RS01095 PF00793 DAHP synthetase I family AKJ08_RS01100 PF02621 Menaquinone biosynthesis AKJ08_RS01115 PF00534 Glycosyl transferases group 1 AKJ08_RS01115 PF13439 Glycosyltransferase Family 4 AKJ08_RS01120 PF00535 Glycosyl transferase family 2 AKJ08_RS01125 PF00733 Asparagine synthase AKJ08_RS01125 PF13537 Glutamine amidotransferase domain AKJ08_RS01130 PF01757 Acyltransferase family AKJ08_RS01185 PF00733 Asparagine synthase AKJ08_RS01185 PF13537 Glutamine amidotransferase domain AKJ08_RS01190 PF00501 AMP-binding enzyme AKJ08_RS01190 PF13193 AMP-binding enzyme C-terminal domain AKJ08_RS01195 PF02540 NAD synthase AKJ08_RS01200 PF02397 Bacterial sugar transferase AKJ08_RS01220 PF00830 Ribosomal L28 family AKJ08_RS01230 PF00551 Formyl transferase AKJ08_RS01235 PF00586 AIR synthase related protein, N-terminal domain AKJ08_RS01235 PF02769 AIR synthase related protein, C-terminal domain AKJ08_RS01240 PF01168 Alanine racemase, N-terminal domain AKJ08_RS01260 PF07690 Major Facilitator Superfamily AKJ08_RS01275 PF02875 Mur ligase family, glutamate ligase domain AKJ08_RS01275 PF08245 Mur ligase middle domain AKJ08_RS01280 PF00561 alpha/beta hydrolase fold AKJ08_RS01290 PF03968 OstA-like protein AKJ08_RS01290 PF04453 LPS transport system D AKJ08_RS01295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AKJ08_RS01295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AKJ08_RS01295 PF01842 ACT domain AKJ08_RS01305 PF00709 Adenylosuccinate synthetase AKJ08_RS01310 PF02699 Preprotein translocase subunit AKJ08_RS01315 PF02355 Protein export membrane protein AKJ08_RS01315 PF07549 SecD/SecF GG Motif AKJ08_RS01320 PF07549 SecD/SecF GG Motif AKJ08_RS01320 PF02355 Protein export membrane protein AKJ08_RS01340 PF07681 DoxX AKJ08_RS01355 PF02272 DHHA1 domain AKJ08_RS01355 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AKJ08_RS01355 PF17768 RecJ OB domain AKJ08_RS01355 PF01368 DHH family AKJ08_RS01360 PF03795 YCII-related domain AKJ08_RS01370 PF08281 Sigma-70, region 4 AKJ08_RS01370 PF04542 Sigma-70 region 2 AKJ08_RS01380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AKJ08_RS01405 PF01336 OB-fold nucleic acid binding domain AKJ08_RS01405 PF00152 tRNA synthetases class II (D, K and N) AKJ08_RS01405 PF02938 GAD domain AKJ08_RS01410 PF01266 FAD dependent oxidoreductase AKJ08_RS01410 PF04324 BFD-like [2Fe-2S] binding domain AKJ08_RS01425 PF01565 FAD binding domain AKJ08_RS01425 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AKJ08_RS01430 PF00781 Diacylglycerol kinase catalytic domain AKJ08_RS01435 PF01243 Pyridoxamine 5'-phosphate oxidase AKJ08_RS01435 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AKJ08_RS01475 PF00176 SNF2 family N-terminal domain AKJ08_RS01475 PF00271 Helicase conserved C-terminal domain AKJ08_RS01480 PF02581 Thiamine monophosphate synthase AKJ08_RS01485 PF05690 Thiazole biosynthesis protein ThiG AKJ08_RS01505 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AKJ08_RS01515 PF00155 Aminotransferase class I and II AKJ08_RS01525 PF01553 Acyltransferase AKJ08_RS01530 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS01530 PF00072 Response regulator receiver domain AKJ08_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS01535 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS01535 PF00989 PAS fold AKJ08_RS01535 PF16736 Single Cache-like AKJ08_RS01545 PF01556 DnaJ C terminal domain AKJ08_RS01545 PF00226 DnaJ domain AKJ08_RS01555 PF00583 Acetyltransferase (GNAT) family AKJ08_RS01560 PF01180 Dihydroorotate dehydrogenase AKJ08_RS01575 PF04055 Radical SAM superfamily AKJ08_RS01595 PF11967 Recombination protein O N terminal AKJ08_RS01595 PF02565 Recombination protein O C terminal AKJ08_RS01600 PF00106 short chain dehydrogenase AKJ08_RS01605 PF04030 D-arabinono-1,4-lactone oxidase AKJ08_RS01605 PF01565 FAD binding domain AKJ08_RS01610 PF01040 UbiA prenyltransferase family AKJ08_RS01630 PF02881 SRP54-type protein, helical bundle domain AKJ08_RS01630 PF00448 SRP54-type protein, GTPase domain AKJ08_RS01635 PF01252 Signal peptidase (SPase) II AKJ08_RS01650 PF12852 Cupin AKJ08_RS01650 PF12833 Helix-turn-helix domain AKJ08_RS01655 PF07690 Major Facilitator Superfamily AKJ08_RS01660 PF00300 Histidine phosphatase superfamily (branch 1) AKJ08_RS01660 PF13456 Reverse transcriptase-like AKJ08_RS01675 PF04542 Sigma-70 region 2 AKJ08_RS01675 PF00140 Sigma-70 factor, region 1.2 AKJ08_RS01675 PF03979 Sigma-70 factor, region 1.1 AKJ08_RS01675 PF04546 Sigma-70, non-essential region AKJ08_RS01675 PF04539 Sigma-70 region 3 AKJ08_RS01675 PF04545 Sigma-70, region 4 AKJ08_RS01680 PF08275 DNA primase catalytic core, N-terminal domain AKJ08_RS01680 PF01807 CHC2 zinc finger AKJ08_RS01680 PF10410 DnaB-helicase binding domain of primase AKJ08_RS01685 PF09424 Yqey-like protein AKJ08_RS01690 PF01165 Ribosomal protein S21 AKJ08_RS01700 PF00216 Bacterial DNA-binding protein AKJ08_RS01705 PF03631 Virulence factor BrkB AKJ08_RS01710 PF10150 Ribonuclease E/G family AKJ08_RS01710 PF00575 S1 RNA binding domain AKJ08_RS01740 PF02390 Putative methyltransferase AKJ08_RS01750 PF00149 Calcineurin-like phosphoesterase AKJ08_RS01755 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS01765 PF00005 ABC transporter AKJ08_RS01765 PF02687 FtsX-like permease family AKJ08_RS01765 PF12704 MacB-like periplasmic core domain AKJ08_RS01770 PF00005 ABC transporter AKJ08_RS01770 PF02687 FtsX-like permease family AKJ08_RS01770 PF12704 MacB-like periplasmic core domain AKJ08_RS01775 PF00293 NUDIX domain AKJ08_RS01805 PF00106 short chain dehydrogenase AKJ08_RS01815 PF07726 ATPase family associated with various cellular activities (AAA) AKJ08_RS01815 PF17863 AAA lid domain AKJ08_RS01820 PF01882 Protein of unknown function DUF58 AKJ08_RS01830 PF00092 von Willebrand factor type A domain AKJ08_RS01855 PF00391 PEP-utilising enzyme, mobile domain AKJ08_RS01855 PF02896 PEP-utilising enzyme, TIM barrel domain AKJ08_RS01855 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AKJ08_RS01860 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKJ08_RS01860 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AKJ08_RS01885 PF00561 alpha/beta hydrolase fold AKJ08_RS01895 PF01142 tRNA pseudouridine synthase D (TruD) AKJ08_RS01910 PF06965 Na+/H+ antiporter 1 AKJ08_RS01910 PF13462 Thioredoxin AKJ08_RS01915 PF13649 Methyltransferase domain AKJ08_RS01920 PF17763 Glutaminase/Asparaginase C-terminal domain AKJ08_RS01920 PF00710 Asparaginase, N-terminal AKJ08_RS01945 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS01945 PF01590 GAF domain AKJ08_RS01945 PF00158 Sigma-54 interaction domain AKJ08_RS01950 PF05175 Methyltransferase small domain AKJ08_RS01950 PF17827 PrmC N-terminal domain AKJ08_RS01970 PF02576 RimP N-terminal domain AKJ08_RS01970 PF17384 RimP C-terminal SH3 domain AKJ08_RS01975 PF08529 NusA N-terminal domain AKJ08_RS01975 PF00575 S1 RNA binding domain AKJ08_RS01975 PF13184 NusA-like KH domain AKJ08_RS01985 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS01985 PF11987 Translation-initiation factor 2 AKJ08_RS01985 PF04760 Translation initiation factor IF-2, N-terminal region AKJ08_RS01995 PF02033 Ribosome-binding factor A AKJ08_RS02000 PF01509 TruB family pseudouridylate synthase (N terminal domain) AKJ08_RS02000 PF16198 tRNA pseudouridylate synthase B C-terminal domain AKJ08_RS02005 PF00312 Ribosomal protein S15 AKJ08_RS02010 PF00575 S1 RNA binding domain AKJ08_RS02010 PF01138 3' exoribonuclease family, domain 1 AKJ08_RS02010 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AKJ08_RS02010 PF03725 3' exoribonuclease family, domain 2 AKJ08_RS02010 PF00013 KH domain AKJ08_RS02020 PF02368 Bacterial Ig-like domain (group 2) AKJ08_RS02020 PF11999 Protein of unknown function (DUF3494) AKJ08_RS02040 PF00692 dUTPase AKJ08_RS02060 PF01433 Peptidase family M1 domain AKJ08_RS02060 PF11838 ERAP1-like C-terminal domain AKJ08_RS02070 PF02811 PHP domain AKJ08_RS02070 PF00929 Exonuclease AKJ08_RS02070 PF11490 DNA polymerase III polC-type N-terminus II AKJ08_RS02070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AKJ08_RS02070 PF07733 Bacterial DNA polymerase III alpha NTPase domain AKJ08_RS02070 PF14579 Helix-hairpin-helix motif AKJ08_RS02075 PF10397 Adenylosuccinate lyase C-terminus AKJ08_RS02075 PF00206 Lyase AKJ08_RS02080 PF00893 Small Multidrug Resistance protein AKJ08_RS02085 PF01259 SAICAR synthetase AKJ08_RS02100 PF03553 Na+/H+ antiporter family AKJ08_RS02105 PF17820 PDZ domain AKJ08_RS02105 PF13180 PDZ domain AKJ08_RS02115 PF00578 AhpC/TSA family AKJ08_RS02120 PF00072 Response regulator receiver domain AKJ08_RS02120 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS02135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AKJ08_RS02135 PF01871 AMMECR1 AKJ08_RS02155 PF00293 NUDIX domain AKJ08_RS02165 PF13193 AMP-binding enzyme C-terminal domain AKJ08_RS02165 PF00501 AMP-binding enzyme AKJ08_RS02165 PF16177 Acetyl-coenzyme A synthetase N-terminus AKJ08_RS02170 PF01351 Ribonuclease HII AKJ08_RS02190 PF00694 Aconitase C-terminal domain AKJ08_RS02195 PF01351 Ribonuclease HII AKJ08_RS02215 PF00330 Aconitase family (aconitate hydratase) AKJ08_RS02225 PF02803 Thiolase, C-terminal domain AKJ08_RS02225 PF00108 Thiolase, N-terminal domain AKJ08_RS02230 PF00171 Aldehyde dehydrogenase family AKJ08_RS02235 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS02245 PF02566 OsmC-like protein AKJ08_RS02260 PF00069 Protein kinase domain AKJ08_RS02270 PF00107 Zinc-binding dehydrogenase AKJ08_RS02270 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS02275 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS02280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AKJ08_RS02280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AKJ08_RS02295 PF00390 Malic enzyme, N-terminal domain AKJ08_RS02295 PF03949 Malic enzyme, NAD binding domain AKJ08_RS02295 PF01515 Phosphate acetyl/butaryl transferase AKJ08_RS02345 PF17755 UvrA DNA-binding domain AKJ08_RS02345 PF17760 UvrA interaction domain AKJ08_RS02380 PF01916 Deoxyhypusine synthase AKJ08_RS02395 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS02395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS02395 PF00072 Response regulator receiver domain AKJ08_RS02395 PF01627 Hpt domain AKJ08_RS02395 PF00497 Bacterial extracellular solute-binding proteins, family 3 AKJ08_RS02405 PF07726 ATPase family associated with various cellular activities (AAA) AKJ08_RS02405 PF17863 AAA lid domain AKJ08_RS02410 PF11992 Domain of unknown function (DUF3488) AKJ08_RS02410 PF01841 Transglutaminase-like superfamily AKJ08_RS02410 PF13559 Domain of unknown function (DUF4129) AKJ08_RS02415 PF00005 ABC transporter AKJ08_RS02415 PF12848 ABC transporter AKJ08_RS02415 PF16326 ABC transporter C-terminal domain AKJ08_RS02430 PF02504 Fatty acid synthesis protein AKJ08_RS02445 PF08331 Domain of unknown function (DUF1730) AKJ08_RS02450 PF01923 Cobalamin adenosyltransferase AKJ08_RS02455 PF01555 DNA methylase AKJ08_RS02465 PF06965 Na+/H+ antiporter 1 AKJ08_RS02470 PF01966 HD domain AKJ08_RS02475 PF07478 D-ala D-ala ligase C-terminus AKJ08_RS02485 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS02485 PF00072 Response regulator receiver domain AKJ08_RS02485 PF00158 Sigma-54 interaction domain AKJ08_RS02490 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS02495 PF00873 AcrB/AcrD/AcrF family AKJ08_RS02510 PF00691 OmpA family AKJ08_RS02510 PF13488 Glycine zipper AKJ08_RS02515 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS02515 PF16123 Hydroxyacylglutathione hydrolase C-terminus AKJ08_RS02520 PF00694 Aconitase C-terminal domain AKJ08_RS02520 PF00330 Aconitase family (aconitate hydratase) AKJ08_RS02530 PF14760 Rnk N-terminus AKJ08_RS02530 PF01272 Transcription elongation factor, GreA/GreB, C-term AKJ08_RS02545 PF00303 Thymidylate synthase AKJ08_RS02550 PF00186 Dihydrofolate reductase AKJ08_RS02570 PF00374 Nickel-dependent hydrogenase AKJ08_RS02575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AKJ08_RS02575 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AKJ08_RS02580 PF02769 AIR synthase related protein, C-terminal domain AKJ08_RS02580 PF00586 AIR synthase related protein, N-terminal domain AKJ08_RS02585 PF13580 SIS domain AKJ08_RS02590 PF01924 Hydrogenase formation hypA family AKJ08_RS02595 PF01455 HupF/HypC family AKJ08_RS02600 PF17788 HypF Kae1-like domain AKJ08_RS02600 PF01300 Telomere recombination AKJ08_RS02600 PF07503 HypF finger AKJ08_RS02600 PF00708 Acylphosphatase AKJ08_RS02605 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AKJ08_RS02610 PF02492 CobW/HypB/UreG, nucleotide-binding domain AKJ08_RS02615 PF01521 Iron-sulphur cluster biosynthesis AKJ08_RS02615 PF01106 NifU-like domain AKJ08_RS02650 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS02650 PF00072 Response regulator receiver domain AKJ08_RS02655 PF00672 HAMP domain AKJ08_RS02655 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS02655 PF13426 PAS domain AKJ08_RS02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS02670 PF01209 ubiE/COQ5 methyltransferase family AKJ08_RS02675 PF04293 SpoVR like protein AKJ08_RS02680 PF04285 Protein of unknown function (DUF444) AKJ08_RS02685 PF06798 PrkA serine protein kinase C-terminal domain AKJ08_RS02685 PF08298 PrkA AAA domain AKJ08_RS02690 PF02424 ApbE family AKJ08_RS02695 PF03652 Holliday junction resolvase AKJ08_RS02705 PF01894 Uncharacterised protein family UPF0047 AKJ08_RS02710 PF02374 Anion-transporting ATPase AKJ08_RS02710 PF17886 HSP20-like domain found in ArsA AKJ08_RS02715 PF02374 Anion-transporting ATPase AKJ08_RS02725 PF13614 AAA domain AKJ08_RS02730 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AKJ08_RS02730 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AKJ08_RS02730 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AKJ08_RS02745 PF05233 PHB accumulation regulatory domain AKJ08_RS02745 PF07879 PHB/PHA accumulation regulator DNA-binding domain AKJ08_RS02755 PF02630 SCO1/SenC AKJ08_RS02760 PF03781 Sulfatase-modifying factor enzyme 1 AKJ08_RS02765 PF00355 Rieske [2Fe-2S] domain AKJ08_RS02785 PF00535 Glycosyl transferase family 2 AKJ08_RS02800 PF03009 Glycerophosphoryl diester phosphodiesterase family AKJ08_RS02815 PF01965 DJ-1/PfpI family AKJ08_RS02835 PF08443 RimK-like ATP-grasp domain AKJ08_RS02835 PF18030 RimK PreATP-grasp domain AKJ08_RS02845 PF03572 Peptidase family S41 AKJ08_RS02845 PF13180 PDZ domain AKJ08_RS02850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AKJ08_RS02850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AKJ08_RS02865 PF02272 DHHA1 domain AKJ08_RS02865 PF01411 tRNA synthetases class II (A) AKJ08_RS02865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKJ08_RS02875 PF03009 Glycerophosphoryl diester phosphodiesterase family AKJ08_RS02910 PF00580 UvrD/REP helicase N-terminal domain AKJ08_RS02910 PF13361 UvrD-like helicase C-terminal domain AKJ08_RS02915 PF00572 Ribosomal protein L13 AKJ08_RS02920 PF00380 Ribosomal protein S9/S16 AKJ08_RS02925 PF00437 Type II/IV secretion system protein AKJ08_RS02930 PF02631 RecX family AKJ08_RS02950 PF01520 N-acetylmuramoyl-L-alanine amidase AKJ08_RS02950 PF08239 Bacterial SH3 domain AKJ08_RS02955 PF01138 3' exoribonuclease family, domain 1 AKJ08_RS02955 PF03725 3' exoribonuclease family, domain 2 AKJ08_RS02960 PF01725 Ham1 family AKJ08_RS02995 PF05697 Bacterial trigger factor protein (TF) AKJ08_RS02995 PF05698 Bacterial trigger factor protein (TF) C-terminus AKJ08_RS03000 PF00574 Clp protease AKJ08_RS03005 PF10431 C-terminal, D2-small domain, of ClpB protein AKJ08_RS03005 PF06689 ClpX C4-type zinc finger AKJ08_RS03005 PF07724 AAA domain (Cdc48 subfamily) AKJ08_RS03010 PF05362 Lon protease (S16) C-terminal proteolytic domain AKJ08_RS03010 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS03010 PF02190 ATP-dependent protease La (LON) substrate-binding domain AKJ08_RS03035 PF00561 alpha/beta hydrolase fold AKJ08_RS03040 PF04972 BON domain AKJ08_RS03040 PF00691 OmpA family AKJ08_RS03045 PF00723 Glycosyl hydrolases family 15 AKJ08_RS03055 PF13378 Enolase C-terminal domain-like AKJ08_RS03055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AKJ08_RS03060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKJ08_RS03060 PF00205 Thiamine pyrophosphate enzyme, central domain AKJ08_RS03060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AKJ08_RS03065 PF02913 FAD linked oxidases, C-terminal domain AKJ08_RS03065 PF01565 FAD binding domain AKJ08_RS03065 PF13183 4Fe-4S dicluster domain AKJ08_RS03100 PF00510 Cytochrome c oxidase subunit III AKJ08_RS03105 PF00115 Cytochrome C and Quinol oxidase polypeptide I AKJ08_RS03105 PF00510 Cytochrome c oxidase subunit III AKJ08_RS03110 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AKJ08_RS03110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AKJ08_RS03140 PF00037 4Fe-4S binding domain AKJ08_RS03140 PF13247 4Fe-4S dicluster domain AKJ08_RS03145 PF00384 Molybdopterin oxidoreductase AKJ08_RS03145 PF01568 Molydopterin dinucleotide binding domain AKJ08_RS03155 PF00156 Phosphoribosyl transferase domain AKJ08_RS03155 PF01738 Dienelactone hydrolase family AKJ08_RS03160 PF14716 Helix-hairpin-helix domain AKJ08_RS03160 PF02811 PHP domain AKJ08_RS03160 PF14791 DNA polymerase beta thumb AKJ08_RS03170 PF16870 2-oxoglutarate dehydrogenase C-terminal AKJ08_RS03170 PF02779 Transketolase, pyrimidine binding domain AKJ08_RS03170 PF16078 2-oxoglutarate dehydrogenase N-terminus AKJ08_RS03170 PF00676 Dehydrogenase E1 component AKJ08_RS03175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKJ08_RS03175 PF00364 Biotin-requiring enzyme AKJ08_RS03175 PF02817 e3 binding domain AKJ08_RS03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS03180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKJ08_RS03185 PF04679 ATP dependent DNA ligase C terminal region AKJ08_RS03185 PF13298 DNA polymerase Ligase (LigD) AKJ08_RS03185 PF01068 ATP dependent DNA ligase domain AKJ08_RS03195 PF02416 mttA/Hcf106 family AKJ08_RS03200 PF01218 Coproporphyrinogen III oxidase AKJ08_RS03205 PF01208 Uroporphyrinogen decarboxylase (URO-D) AKJ08_RS03210 PF01593 Flavin containing amine oxidoreductase AKJ08_RS03225 PF16193 AAA C-terminal domain AKJ08_RS03225 PF12002 MgsA AAA+ ATPase C terminal AKJ08_RS03225 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS03230 PF01513 ATP-NAD kinase AKJ08_RS03235 PF02463 RecF/RecN/SMC N terminal domain AKJ08_RS03245 PF01551 Peptidase family M23 AKJ08_RS03245 PF08525 Opacity-associated protein A N-terminal motif AKJ08_RS03245 PF01476 LysM domain AKJ08_RS03250 PF02810 SEC-C motif AKJ08_RS03250 PF07517 SecA DEAD-like domain AKJ08_RS03250 PF07516 SecA Wing and Scaffold domain AKJ08_RS03250 PF01043 SecA preprotein cross-linking domain AKJ08_RS03255 PF00318 Ribosomal protein S2 AKJ08_RS03260 PF00889 Elongation factor TS AKJ08_RS03265 PF00696 Amino acid kinase family AKJ08_RS03270 PF01765 Ribosome recycling factor AKJ08_RS03285 PF00873 AcrB/AcrD/AcrF family AKJ08_RS03290 PF13533 Biotin-lipoyl like AKJ08_RS03300 PF01300 Telomere recombination AKJ08_RS03300 PF03481 Putative GTP-binding controlling metal-binding AKJ08_RS03335 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS03335 PF13567 Domain of unknown function (DUF4131) AKJ08_RS03335 PF03772 Competence protein AKJ08_RS03340 PF01791 DeoC/LacD family aldolase AKJ08_RS03345 PF02885 Glycosyl transferase family, helical bundle domain AKJ08_RS03345 PF00591 Glycosyl transferase family, a/b domain AKJ08_RS03345 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AKJ08_RS03350 PF01048 Phosphorylase superfamily AKJ08_RS03355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AKJ08_RS03360 PF00654 Voltage gated chloride channel AKJ08_RS03365 PF01687 Riboflavin kinase AKJ08_RS03365 PF06574 FAD synthetase AKJ08_RS03370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AKJ08_RS03370 PF00437 Type II/IV secretion system protein AKJ08_RS03375 PF00437 Type II/IV secretion system protein AKJ08_RS03380 PF00482 Type II secretion system (T2SS), protein F AKJ08_RS03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS03385 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS03385 PF00989 PAS fold AKJ08_RS03390 PF00158 Sigma-54 interaction domain AKJ08_RS03390 PF00072 Response regulator receiver domain AKJ08_RS03390 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS03395 PF05567 Neisseria PilC beta-propeller domain AKJ08_RS03435 PF14245 Type IV pilin PilA AKJ08_RS03435 PF07963 Prokaryotic N-terminal methylation motif AKJ08_RS03440 PF00005 ABC transporter AKJ08_RS03445 PF16347 Domain of unknown function (DUF4976) AKJ08_RS03445 PF00884 Sulfatase AKJ08_RS03450 PF06750 Bacterial Peptidase A24 N-terminal domain AKJ08_RS03450 PF01478 Type IV leader peptidase family AKJ08_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS03455 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS03460 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS03460 PF00158 Sigma-54 interaction domain AKJ08_RS03460 PF00072 Response regulator receiver domain AKJ08_RS03470 PF11104 Type IV pilus assembly protein PilM; AKJ08_RS03490 PF00263 Bacterial type II and III secretion system protein AKJ08_RS03490 PF07660 Secretin and TonB N terminus short domain AKJ08_RS03490 PF03958 Bacterial type II/III secretion system short domain AKJ08_RS03490 PF11741 AMIN domain AKJ08_RS03505 PF09285 Elongation factor P, C-terminal AKJ08_RS03505 PF08207 Elongation factor P (EF-P) KOW-like domain AKJ08_RS03505 PF01132 Elongation factor P (EF-P) OB domain AKJ08_RS03510 PF00364 Biotin-requiring enzyme AKJ08_RS03515 PF00289 Biotin carboxylase, N-terminal domain AKJ08_RS03515 PF02785 Biotin carboxylase C-terminal domain AKJ08_RS03515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKJ08_RS03540 PF07690 Major Facilitator Superfamily AKJ08_RS03550 PF07676 WD40-like Beta Propeller Repeat AKJ08_RS03550 PF04052 TolB amino-terminal domain AKJ08_RS03560 PF02472 Biopolymer transport protein ExbD/TolR AKJ08_RS03565 PF01618 MotA/TolQ/ExbB proton channel family AKJ08_RS03575 PF01177 Asp/Glu/Hydantoin racemase AKJ08_RS03585 PF00456 Transketolase, thiamine diphosphate binding domain AKJ08_RS03590 PF02780 Transketolase, C-terminal domain AKJ08_RS03590 PF02779 Transketolase, pyrimidine binding domain AKJ08_RS03595 PF00005 ABC transporter AKJ08_RS03600 PF18075 FtsX extracellular domain AKJ08_RS03610 PF00561 alpha/beta hydrolase fold AKJ08_RS03610 PF08386 TAP-like protein AKJ08_RS03615 PF13180 PDZ domain AKJ08_RS03615 PF03572 Peptidase family S41 AKJ08_RS03625 PF00012 Hsp70 protein AKJ08_RS03630 PF08298 PrkA AAA domain AKJ08_RS03630 PF06798 PrkA serine protein kinase C-terminal domain AKJ08_RS03635 PF17820 PDZ domain AKJ08_RS03635 PF18509 Magnetochrome domain AKJ08_RS03660 PF00072 Response regulator receiver domain AKJ08_RS03660 PF08279 HTH domain AKJ08_RS03675 PF00158 Sigma-54 interaction domain AKJ08_RS03675 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS03675 PF00072 Response regulator receiver domain AKJ08_RS03680 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS03680 PF00072 Response regulator receiver domain AKJ08_RS03685 PF00072 Response regulator receiver domain AKJ08_RS03685 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS03705 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS03740 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS03740 PF00107 Zinc-binding dehydrogenase AKJ08_RS03745 PF02310 B12 binding domain AKJ08_RS03750 PF01642 Methylmalonyl-CoA mutase AKJ08_RS03750 PF02310 B12 binding domain AKJ08_RS03755 PF03328 HpcH/HpaI aldolase/citrate lyase family AKJ08_RS03760 PF01575 MaoC like domain AKJ08_RS03765 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS03765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS03765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS03775 PF00571 CBS domain AKJ08_RS03775 PF01595 Cyclin M transmembrane N-terminal domain AKJ08_RS03775 PF03471 Transporter associated domain AKJ08_RS03785 PF01047 MarR family AKJ08_RS03795 PF01464 Transglycosylase SLT domain AKJ08_RS03795 PF14718 Soluble lytic murein transglycosylase L domain AKJ08_RS03810 PF00342 Phosphoglucose isomerase AKJ08_RS03815 PF01553 Acyltransferase AKJ08_RS03820 PF01370 NAD dependent epimerase/dehydratase family AKJ08_RS03825 PF08676 MutL C terminal dimerisation domain AKJ08_RS03825 PF01119 DNA mismatch repair protein, C-terminal domain AKJ08_RS03870 PF00158 Sigma-54 interaction domain AKJ08_RS03870 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS03870 PF00072 Response regulator receiver domain AKJ08_RS03880 PF00069 Protein kinase domain AKJ08_RS03880 PF03793 PASTA domain AKJ08_RS03885 PF00365 Phosphofructokinase AKJ08_RS03890 PF01612 3'-5' exonuclease AKJ08_RS03890 PF00476 DNA polymerase family A AKJ08_RS03890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AKJ08_RS03890 PF01367 5'-3' exonuclease, C-terminal SAM fold AKJ08_RS03915 PF01571 Aminomethyltransferase folate-binding domain AKJ08_RS03915 PF01266 FAD dependent oxidoreductase AKJ08_RS03915 PF16350 FAD dependent oxidoreductase central domain AKJ08_RS03915 PF08669 Glycine cleavage T-protein C-terminal barrel domain AKJ08_RS03925 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKJ08_RS03925 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKJ08_RS03930 PF01960 ArgJ family AKJ08_RS03935 PF01316 Arginine repressor, DNA binding domain AKJ08_RS03935 PF02863 Arginine repressor, C-terminal domain AKJ08_RS03940 PF00764 Arginosuccinate synthase AKJ08_RS03945 PF00206 Lyase AKJ08_RS03945 PF14698 Argininosuccinate lyase C-terminal AKJ08_RS03970 PF13302 Acetyltransferase (GNAT) domain AKJ08_RS03975 PF01142 tRNA pseudouridine synthase D (TruD) AKJ08_RS03980 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AKJ08_RS04000 PF04945 YHS domain AKJ08_RS04010 PF00270 DEAD/DEAH box helicase AKJ08_RS04010 PF00271 Helicase conserved C-terminal domain AKJ08_RS04025 PF00005 ABC transporter AKJ08_RS04025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AKJ08_RS04030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AKJ08_RS04030 PF00005 ABC transporter AKJ08_RS04035 PF12911 N-terminal TM domain of oligopeptide transport permease C AKJ08_RS04035 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS04040 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS04045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AKJ08_RS04070 PF13181 Tetratricopeptide repeat AKJ08_RS04070 PF01435 Peptidase family M48 AKJ08_RS04085 PF09334 tRNA synthetases class I (M) AKJ08_RS04085 PF01588 Putative tRNA binding domain AKJ08_RS04095 PF02321 Outer membrane efflux protein AKJ08_RS04100 PF00873 AcrB/AcrD/AcrF family AKJ08_RS04105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKJ08_RS04110 PF01026 TatD related DNase AKJ08_RS04115 PF01966 HD domain AKJ08_RS04140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AKJ08_RS04140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AKJ08_RS04145 PF00162 Phosphoglycerate kinase AKJ08_RS04150 PF00121 Triosephosphate isomerase AKJ08_RS04170 PF13193 AMP-binding enzyme C-terminal domain AKJ08_RS04170 PF00501 AMP-binding enzyme AKJ08_RS04190 PF12806 Acetyl-CoA dehydrogenase C-terminal like AKJ08_RS04190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS04190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS04190 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS04200 PF00005 ABC transporter AKJ08_RS04200 PF00664 ABC transporter transmembrane region AKJ08_RS04205 PF00571 CBS domain AKJ08_RS04215 PF07703 Alpha-2-macroglobulin bait region domain AKJ08_RS04215 PF00207 Alpha-2-macroglobulin family AKJ08_RS04215 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AKJ08_RS04215 PF01835 MG2 domain AKJ08_RS04220 PF00905 Penicillin binding protein transpeptidase domain AKJ08_RS04220 PF00912 Transglycosylase AKJ08_RS04220 PF06832 Penicillin-Binding Protein C-terminus Family AKJ08_RS04235 PF00069 Protein kinase domain AKJ08_RS04235 PF00211 Adenylate and Guanylate cyclase catalytic domain AKJ08_RS04240 PF07075 Protein of unknown function (DUF1343) AKJ08_RS04245 PF01467 Cytidylyltransferase-like AKJ08_RS04255 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS04255 PF07724 AAA domain (Cdc48 subfamily) AKJ08_RS04255 PF17871 AAA lid domain AKJ08_RS04255 PF10431 C-terminal, D2-small domain, of ClpB protein AKJ08_RS04255 PF02861 Clp amino terminal domain, pathogenicity island component AKJ08_RS04265 PF04052 TolB amino-terminal domain AKJ08_RS04265 PF07676 WD40-like Beta Propeller Repeat AKJ08_RS04270 PF01545 Cation efflux family AKJ08_RS04270 PF16916 Dimerisation domain of Zinc Transporter AKJ08_RS04290 PF01467 Cytidylyltransferase-like AKJ08_RS04295 PF00155 Aminotransferase class I and II AKJ08_RS04300 PF00313 'Cold-shock' DNA-binding domain AKJ08_RS04305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKJ08_RS04305 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AKJ08_RS04305 PF02142 MGS-like domain AKJ08_RS04310 PF01272 Transcription elongation factor, GreA/GreB, C-term AKJ08_RS04310 PF03449 Transcription elongation factor, N-terminal AKJ08_RS04315 PF00271 Helicase conserved C-terminal domain AKJ08_RS04315 PF17191 RecG wedge domain AKJ08_RS04315 PF00270 DEAD/DEAH box helicase AKJ08_RS04330 PF02223 Thymidylate kinase AKJ08_RS04335 PF09335 SNARE associated Golgi protein AKJ08_RS04355 PF02464 Competence-damaged protein AKJ08_RS04355 PF00994 Probable molybdopterin binding domain AKJ08_RS04355 PF18146 Damage-inducible protein CinA KH domain AKJ08_RS04370 PF00221 Aromatic amino acid lyase AKJ08_RS04385 PF00535 Glycosyl transferase family 2 AKJ08_RS04390 PF00580 UvrD/REP helicase N-terminal domain AKJ08_RS04390 PF13361 UvrD-like helicase C-terminal domain AKJ08_RS04405 PF01726 LexA DNA binding domain AKJ08_RS04405 PF00717 Peptidase S24-like AKJ08_RS04415 PF02405 Permease MlaE AKJ08_RS04420 PF00005 ABC transporter AKJ08_RS04435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AKJ08_RS04435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AKJ08_RS04460 PF03144 Elongation factor Tu domain 2 AKJ08_RS04460 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS04460 PF00679 Elongation factor G C-terminus AKJ08_RS04485 PF01066 CDP-alcohol phosphatidyltransferase AKJ08_RS04495 PF03129 Anticodon binding domain AKJ08_RS04495 PF02824 TGS domain AKJ08_RS04495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKJ08_RS04495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AKJ08_RS04500 PF00707 Translation initiation factor IF-3, C-terminal domain AKJ08_RS04500 PF05198 Translation initiation factor IF-3, N-terminal domain AKJ08_RS04505 PF01632 Ribosomal protein L35 AKJ08_RS04510 PF00453 Ribosomal protein L20 AKJ08_RS04515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AKJ08_RS04515 PF01409 tRNA synthetases class II core domain (F) AKJ08_RS04520 PF03483 B3/4 domain AKJ08_RS04520 PF01588 Putative tRNA binding domain AKJ08_RS04520 PF03484 tRNA synthetase B5 domain AKJ08_RS04520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AKJ08_RS04520 PF03147 Ferredoxin-fold anticodon binding domain AKJ08_RS04530 PF00216 Bacterial DNA-binding protein AKJ08_RS04540 PF01476 LysM domain AKJ08_RS04540 PF01551 Peptidase family M23 AKJ08_RS04545 PF02163 Peptidase family M50 AKJ08_RS04550 PF02616 Segregation and condensation protein ScpA AKJ08_RS04555 PF04079 Segregation and condensation complex subunit ScpB AKJ08_RS04560 PF00849 RNA pseudouridylate synthase AKJ08_RS04560 PF01479 S4 domain AKJ08_RS04580 PF00113 Enolase, C-terminal TIM barrel domain AKJ08_RS04580 PF03952 Enolase, N-terminal domain AKJ08_RS04585 PF04542 Sigma-70 region 2 AKJ08_RS04585 PF04545 Sigma-70, region 4 AKJ08_RS04585 PF00140 Sigma-70 factor, region 1.2 AKJ08_RS04590 PF00571 CBS domain AKJ08_RS04595 PF00425 chorismate binding enzyme AKJ08_RS04595 PF04715 Anthranilate synthase component I, N terminal region AKJ08_RS04605 PF02735 Ku70/Ku80 beta-barrel domain AKJ08_RS04610 PF17149 Periplasmic sensor domain found in signal transduction proteins AKJ08_RS04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS04610 PF00672 HAMP domain AKJ08_RS04610 PF01627 Hpt domain AKJ08_RS04610 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS04610 PF00072 Response regulator receiver domain AKJ08_RS04640 PF00297 Ribosomal protein L3 AKJ08_RS04715 PF13276 HTH-like domain AKJ08_RS04715 PF13333 Integrase core domain AKJ08_RS04715 PF00665 Integrase core domain AKJ08_RS04725 PF01624 MutS domain I AKJ08_RS04725 PF00488 MutS domain V AKJ08_RS04725 PF05190 MutS family domain IV AKJ08_RS04725 PF05188 MutS domain II AKJ08_RS04725 PF05192 MutS domain III AKJ08_RS04730 PF01520 N-acetylmuramoyl-L-alanine amidase AKJ08_RS04735 PF08335 GlnD PII-uridylyltransferase AKJ08_RS04735 PF01909 Nucleotidyltransferase domain AKJ08_RS04735 PF01966 HD domain AKJ08_RS04740 PF18030 RimK PreATP-grasp domain AKJ08_RS04740 PF08443 RimK-like ATP-grasp domain AKJ08_RS04765 PF01300 Telomere recombination AKJ08_RS04785 PF02899 Phage integrase, N-terminal SAM-like domain AKJ08_RS04785 PF00589 Phage integrase family AKJ08_RS04790 PF01554 MatE AKJ08_RS04795 PF00152 tRNA synthetases class II (D, K and N) AKJ08_RS04795 PF01336 OB-fold nucleic acid binding domain AKJ08_RS04800 PF08264 Anticodon-binding domain of tRNA AKJ08_RS04800 PF09334 tRNA synthetases class I (M) AKJ08_RS04800 PF13603 Leucyl-tRNA synthetase, Domain 2 AKJ08_RS04800 PF00133 tRNA synthetases class I (I, L, M and V) AKJ08_RS04810 PF01649 Ribosomal protein S20 AKJ08_RS04815 PF03819 MazG nucleotide pyrophosphohydrolase domain AKJ08_RS04830 PF02562 PhoH-like protein AKJ08_RS04835 PF07697 7TM-HD extracellular AKJ08_RS04835 PF07698 7TM receptor with intracellular HD hydrolase AKJ08_RS04835 PF01966 HD domain AKJ08_RS04840 PF02130 Uncharacterized protein family UPF0054 AKJ08_RS04850 PF03462 PCRF domain AKJ08_RS04850 PF00472 RF-1 domain AKJ08_RS04860 PF01336 OB-fold nucleic acid binding domain AKJ08_RS04860 PF00152 tRNA synthetases class II (D, K and N) AKJ08_RS04865 PF02687 FtsX-like permease family AKJ08_RS04865 PF12704 MacB-like periplasmic core domain AKJ08_RS04870 PF00005 ABC transporter AKJ08_RS04875 PF01189 16S rRNA methyltransferase RsmB/F AKJ08_RS04875 PF01029 NusB family AKJ08_RS04880 PF00578 AhpC/TSA family AKJ08_RS04880 PF10417 C-terminal domain of 1-Cys peroxiredoxin AKJ08_RS04885 PF00578 AhpC/TSA family AKJ08_RS04890 PF01521 Iron-sulphur cluster biosynthesis AKJ08_RS04895 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS04900 PF02684 Lipid-A-disaccharide synthetase AKJ08_RS04905 PF01914 MarC family integral membrane protein AKJ08_RS04910 PF00664 ABC transporter transmembrane region AKJ08_RS04910 PF00005 ABC transporter AKJ08_RS04925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AKJ08_RS04930 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AKJ08_RS04940 PF00294 pfkB family carbohydrate kinase AKJ08_RS04940 PF01467 Cytidylyltransferase-like AKJ08_RS04945 PF00294 pfkB family carbohydrate kinase AKJ08_RS04945 PF01467 Cytidylyltransferase-like AKJ08_RS04950 PF03966 Trm112p-like protein AKJ08_RS04955 PF03755 YicC-like family, N-terminal region AKJ08_RS04955 PF08340 Domain of unknown function (DUF1732) AKJ08_RS04960 PF00625 Guanylate kinase AKJ08_RS04980 PF01728 FtsJ-like methyltransferase AKJ08_RS04995 PF12832 MFS_1 like family AKJ08_RS05005 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS05010 PF01202 Shikimate kinase AKJ08_RS05050 PF13742 OB-fold nucleic acid binding domain AKJ08_RS05050 PF02601 Exonuclease VII, large subunit AKJ08_RS05055 PF02609 Exonuclease VII small subunit AKJ08_RS05060 PF00072 Response regulator receiver domain AKJ08_RS05060 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS05065 PF00348 Polyprenyl synthetase AKJ08_RS05070 PF00266 Aminotransferase class-V AKJ08_RS05080 PF13784 Fic/DOC family N-terminal AKJ08_RS05080 PF02661 Fic/DOC family AKJ08_RS05095 PF03710 Glutamate-ammonia ligase adenylyltransferase AKJ08_RS05095 PF08335 GlnD PII-uridylyltransferase AKJ08_RS05105 PF09210 Domain of unknown function (DUF1957) AKJ08_RS05105 PF03065 Glycosyl hydrolase family 57 AKJ08_RS05115 PF02563 Polysaccharide biosynthesis/export protein AKJ08_RS05115 PF10531 SLBB domain AKJ08_RS05130 PF13614 AAA domain AKJ08_RS05135 PF02397 Bacterial sugar transferase AKJ08_RS05140 PF01933 Uncharacterised protein family UPF0052 AKJ08_RS05145 PF01380 SIS domain AKJ08_RS05155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AKJ08_RS05175 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS05195 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKJ08_RS05195 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKJ08_RS05195 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKJ08_RS05205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AKJ08_RS05205 PF01676 Metalloenzyme superfamily AKJ08_RS05220 PF00012 Hsp70 protein AKJ08_RS05225 PF01556 DnaJ C terminal domain AKJ08_RS05225 PF00226 DnaJ domain AKJ08_RS05225 PF00684 DnaJ central domain AKJ08_RS05235 PF06689 ClpX C4-type zinc finger AKJ08_RS05235 PF07724 AAA domain (Cdc48 subfamily) AKJ08_RS05235 PF10431 C-terminal, D2-small domain, of ClpB protein AKJ08_RS05250 PF02811 PHP domain AKJ08_RS05255 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AKJ08_RS05260 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AKJ08_RS05265 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AKJ08_RS05270 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AKJ08_RS05275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AKJ08_RS05275 PF00384 Molybdopterin oxidoreductase AKJ08_RS05275 PF01568 Molydopterin dinucleotide binding domain AKJ08_RS05275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AKJ08_RS05280 PF00146 NADH dehydrogenase AKJ08_RS05285 PF00037 4Fe-4S binding domain AKJ08_RS05290 PF04264 YceI-like domain AKJ08_RS05295 PF02378 Phosphotransferase system, EIIC AKJ08_RS05300 PF02378 Phosphotransferase system, EIIC AKJ08_RS05320 PF00850 Histone deacetylase domain AKJ08_RS05330 PF01258 Prokaryotic dksA/traR C4-type zinc finger AKJ08_RS05345 PF00999 Sodium/hydrogen exchanger family AKJ08_RS05355 PF04607 Region found in RelA / SpoT proteins AKJ08_RS05355 PF13291 ACT domain AKJ08_RS05355 PF02824 TGS domain AKJ08_RS05370 PF01042 Endoribonuclease L-PSP AKJ08_RS05375 PF13382 Adenine deaminase C-terminal domain AKJ08_RS05375 PF01979 Amidohydrolase family AKJ08_RS05380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AKJ08_RS05385 PF12544 Lysine-2,3-aminomutase AKJ08_RS05390 PF04055 Radical SAM superfamily AKJ08_RS05390 PF12544 Lysine-2,3-aminomutase AKJ08_RS05450 PF01702 Queuine tRNA-ribosyltransferase AKJ08_RS05455 PF02547 Queuosine biosynthesis protein AKJ08_RS05460 PF08486 Stage II sporulation protein AKJ08_RS05490 PF03772 Competence protein AKJ08_RS05490 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS05495 PF02559 CarD-like/TRCF domain AKJ08_RS05500 PF02542 YgbB family AKJ08_RS05500 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AKJ08_RS05505 PF01406 tRNA synthetases class I (C) catalytic domain AKJ08_RS05505 PF09190 DALR domain AKJ08_RS05510 PF01804 Penicillin amidase AKJ08_RS05515 PF04851 Type III restriction enzyme, res subunit AKJ08_RS05515 PF00271 Helicase conserved C-terminal domain AKJ08_RS05515 PF02151 UvrB/uvrC motif AKJ08_RS05515 PF17757 UvrB interaction domain AKJ08_RS05515 PF12344 Ultra-violet resistance protein B AKJ08_RS05520 PF04389 Peptidase family M28 AKJ08_RS05530 PF12826 Helix-hairpin-helix motif AKJ08_RS05530 PF01541 GIY-YIG catalytic domain AKJ08_RS05530 PF02151 UvrB/uvrC motif AKJ08_RS05530 PF08459 UvrC Helix-hairpin-helix N-terminal AKJ08_RS05545 PF01134 Glucose inhibited division protein A AKJ08_RS05555 PF02899 Phage integrase, N-terminal SAM-like domain AKJ08_RS05555 PF00589 Phage integrase family AKJ08_RS05560 PF00227 Proteasome subunit AKJ08_RS05565 PF10431 C-terminal, D2-small domain, of ClpB protein AKJ08_RS05565 PF07724 AAA domain (Cdc48 subfamily) AKJ08_RS05570 PF03091 CutA1 divalent ion tolerance protein AKJ08_RS05615 PF03749 Sugar fermentation stimulation protein RE domain AKJ08_RS05615 PF17746 SfsA N-terminal OB domain AKJ08_RS05625 PF00578 AhpC/TSA family AKJ08_RS05640 PF00392 Bacterial regulatory proteins, gntR family AKJ08_RS05735 PF02163 Peptidase family M50 AKJ08_RS05735 PF17820 PDZ domain AKJ08_RS05755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AKJ08_RS05820 PF01554 MatE AKJ08_RS05845 PF00403 Heavy-metal-associated domain AKJ08_RS05860 PF08264 Anticodon-binding domain of tRNA AKJ08_RS05860 PF00133 tRNA synthetases class I (I, L, M and V) AKJ08_RS05870 PF03625 Domain of unknown function DUF302 AKJ08_RS05870 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AKJ08_RS05900 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS05900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS05905 PF00892 EamA-like transporter family AKJ08_RS05910 PF01743 Poly A polymerase head domain AKJ08_RS05910 PF12627 Probable RNA and SrmB- binding site of polymerase A AKJ08_RS05910 PF13735 tRNA nucleotidyltransferase domain 2 putative AKJ08_RS05920 PF00108 Thiolase, N-terminal domain AKJ08_RS05920 PF02803 Thiolase, C-terminal domain AKJ08_RS05925 PF01144 Coenzyme A transferase AKJ08_RS05930 PF01144 Coenzyme A transferase AKJ08_RS05935 PF05958 tRNA (Uracil-5-)-methyltransferase AKJ08_RS05940 PF05958 tRNA (Uracil-5-)-methyltransferase AKJ08_RS05940 PF01938 TRAM domain AKJ08_RS05955 PF07681 DoxX AKJ08_RS05965 PF05114 Protein of unknown function (DUF692) AKJ08_RS06010 PF00919 Uncharacterized protein family UPF0004 AKJ08_RS06010 PF04055 Radical SAM superfamily AKJ08_RS06010 PF01938 TRAM domain AKJ08_RS06045 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS06050 PF00072 Response regulator receiver domain AKJ08_RS06050 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS06055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AKJ08_RS06055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AKJ08_RS06065 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS06070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS06070 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS06070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS06080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS06080 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS06080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS06090 PF01642 Methylmalonyl-CoA mutase AKJ08_RS06090 PF02310 B12 binding domain AKJ08_RS06095 PF01642 Methylmalonyl-CoA mutase AKJ08_RS06095 PF02310 B12 binding domain AKJ08_RS06110 PF00682 HMGL-like AKJ08_RS06125 PF12697 Alpha/beta hydrolase family AKJ08_RS06135 PF10996 Beta-Casp domain AKJ08_RS06135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AKJ08_RS06135 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS06165 PF00005 ABC transporter AKJ08_RS06165 PF12704 MacB-like periplasmic core domain AKJ08_RS06165 PF02687 FtsX-like permease family AKJ08_RS06170 PF00005 ABC transporter AKJ08_RS06175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKJ08_RS06195 PF02779 Transketolase, pyrimidine binding domain AKJ08_RS06195 PF02780 Transketolase, C-terminal domain AKJ08_RS06195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AKJ08_RS06200 PF01479 S4 domain AKJ08_RS06200 PF01728 FtsJ-like methyltransferase AKJ08_RS06205 PF00072 Response regulator receiver domain AKJ08_RS06205 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS06215 PF12146 Serine aminopeptidase, S33 AKJ08_RS06230 PF00156 Phosphoribosyl transferase domain AKJ08_RS06240 PF00520 Ion transport protein AKJ08_RS06240 PF00027 Cyclic nucleotide-binding domain AKJ08_RS06245 PF00890 FAD binding domain AKJ08_RS06245 PF02910 Fumarate reductase flavoprotein C-term AKJ08_RS06250 PF01464 Transglycosylase SLT domain AKJ08_RS06260 PF04055 Radical SAM superfamily AKJ08_RS06265 PF00294 pfkB family carbohydrate kinase AKJ08_RS06265 PF01467 Cytidylyltransferase-like AKJ08_RS06295 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AKJ08_RS06300 PF01343 Peptidase family S49 AKJ08_RS06305 PF01883 Iron-sulfur cluster assembly protein AKJ08_RS06305 PF10609 NUBPL iron-transfer P-loop NTPase AKJ08_RS06320 PF00027 Cyclic nucleotide-binding domain AKJ08_RS06320 PF13545 Crp-like helix-turn-helix domain AKJ08_RS06340 PF09335 SNARE associated Golgi protein AKJ08_RS06345 PF00478 IMP dehydrogenase / GMP reductase domain AKJ08_RS06345 PF00571 CBS domain AKJ08_RS06350 PF02540 NAD synthase AKJ08_RS06350 PF00958 GMP synthase C terminal domain AKJ08_RS06350 PF00117 Glutamine amidotransferase class-I AKJ08_RS06370 PF02659 Putative manganese efflux pump AKJ08_RS06405 PF09857 Putative toxin of bacterial toxin-antitoxin pair AKJ08_RS06430 PF12950 TaqI-like C-terminal specificity domain AKJ08_RS06430 PF07669 Eco57I restriction-modification methylase AKJ08_RS06455 PF00271 Helicase conserved C-terminal domain AKJ08_RS06455 PF08494 DEAD/H associated AKJ08_RS06455 PF00270 DEAD/DEAH box helicase AKJ08_RS06460 PF14338 Mrr N-terminal domain AKJ08_RS06460 PF04471 Restriction endonuclease AKJ08_RS06465 PF03060 Nitronate monooxygenase AKJ08_RS06490 PF04542 Sigma-70 region 2 AKJ08_RS06490 PF08281 Sigma-70, region 4 AKJ08_RS06550 PF00849 RNA pseudouridylate synthase AKJ08_RS06560 PF00884 Sulfatase AKJ08_RS06570 PF00293 NUDIX domain AKJ08_RS06590 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AKJ08_RS06590 PF01926 50S ribosome-binding GTPase AKJ08_RS06595 PF07650 KH domain AKJ08_RS06595 PF01926 50S ribosome-binding GTPase AKJ08_RS06600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AKJ08_RS06605 PF14622 Ribonuclease-III-like AKJ08_RS06605 PF00035 Double-stranded RNA binding motif AKJ08_RS06620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS06620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS06620 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS06625 PF01039 Carboxyl transferase domain AKJ08_RS06640 PF00593 TonB dependent receptor AKJ08_RS06640 PF07715 TonB-dependent Receptor Plug Domain AKJ08_RS06650 PF05171 Haemin-degrading HemS.ChuX domain AKJ08_RS06655 PF01497 Periplasmic binding protein AKJ08_RS06660 PF01032 FecCD transport family AKJ08_RS06665 PF00005 ABC transporter AKJ08_RS06670 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS06675 PF00069 Protein kinase domain AKJ08_RS06680 PF00989 PAS fold AKJ08_RS06680 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS06680 PF16736 Single Cache-like AKJ08_RS06685 PF00072 Response regulator receiver domain AKJ08_RS06685 PF09308 LuxQ, periplasmic AKJ08_RS06685 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS06690 PF01812 5-formyltetrahydrofolate cyclo-ligase family AKJ08_RS06695 PF00579 tRNA synthetases class I (W and Y) AKJ08_RS06695 PF01479 S4 domain AKJ08_RS06720 PF01964 Radical SAM ThiC family AKJ08_RS06725 PF04545 Sigma-70, region 4 AKJ08_RS06725 PF00140 Sigma-70 factor, region 1.2 AKJ08_RS06725 PF04542 Sigma-70 region 2 AKJ08_RS06730 PF01565 FAD binding domain AKJ08_RS06730 PF02913 FAD linked oxidases, C-terminal domain AKJ08_RS06735 PF01227 GTP cyclohydrolase I AKJ08_RS06740 PF01242 6-pyruvoyl tetrahydropterin synthase AKJ08_RS06750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AKJ08_RS06750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKJ08_RS06750 PF00205 Thiamine pyrophosphate enzyme, central domain AKJ08_RS06770 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AKJ08_RS06770 PF02867 Ribonucleotide reductase, barrel domain AKJ08_RS06790 PF02368 Bacterial Ig-like domain (group 2) AKJ08_RS06790 PF11999 Protein of unknown function (DUF3494) AKJ08_RS06805 PF03330 Lytic transglycolase AKJ08_RS06830 PF00037 4Fe-4S binding domain AKJ08_RS06850 PF01066 CDP-alcohol phosphatidyltransferase AKJ08_RS06855 PF03471 Transporter associated domain AKJ08_RS06855 PF00571 CBS domain AKJ08_RS06865 PF00334 Nucleoside diphosphate kinase AKJ08_RS06875 PF00549 CoA-ligase AKJ08_RS06875 PF08442 ATP-grasp domain AKJ08_RS06880 PF13237 4Fe-4S dicluster domain AKJ08_RS06880 PF13085 2Fe-2S iron-sulfur cluster binding domain AKJ08_RS06885 PF02910 Fumarate reductase flavoprotein C-term AKJ08_RS06885 PF00890 FAD binding domain AKJ08_RS06895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AKJ08_RS06895 PF00056 lactate/malate dehydrogenase, NAD binding domain AKJ08_RS06900 PF00180 Isocitrate/isopropylmalate dehydrogenase AKJ08_RS06910 PF00391 PEP-utilising enzyme, mobile domain AKJ08_RS06910 PF00224 Pyruvate kinase, barrel domain AKJ08_RS06910 PF02887 Pyruvate kinase, alpha/beta domain AKJ08_RS06920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AKJ08_RS06920 PF00117 Glutamine amidotransferase class-I AKJ08_RS06925 PF01979 Amidohydrolase family AKJ08_RS06930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AKJ08_RS06930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AKJ08_RS06935 PF13091 PLD-like domain AKJ08_RS06945 PF10502 Signal peptidase, peptidase S26 AKJ08_RS06950 PF10502 Signal peptidase, peptidase S26 AKJ08_RS06955 PF06421 GTP-binding protein LepA C-terminus AKJ08_RS06955 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS06955 PF00679 Elongation factor G C-terminus AKJ08_RS06955 PF03144 Elongation factor Tu domain 2 AKJ08_RS06960 PF16363 GDP-mannose 4,6 dehydratase AKJ08_RS06980 PF03485 Arginyl tRNA synthetase N terminal domain AKJ08_RS06980 PF05746 DALR anticodon binding domain AKJ08_RS06980 PF00750 tRNA synthetases class I (R) AKJ08_RS06985 PF18073 Rubredoxin metal binding domain AKJ08_RS06990 PF01230 HIT domain AKJ08_RS06995 PF01343 Peptidase family S49 AKJ08_RS07010 PF02578 Multi-copper polyphenol oxidoreductase laccase AKJ08_RS07020 PF00072 Response regulator receiver domain AKJ08_RS07035 PF07728 AAA domain (dynein-related subfamily) AKJ08_RS07040 PF00149 Calcineurin-like phosphoesterase AKJ08_RS07045 PF13439 Glycosyltransferase Family 4 AKJ08_RS07045 PF00534 Glycosyl transferases group 1 AKJ08_RS07055 PF00158 Sigma-54 interaction domain AKJ08_RS07055 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS07055 PF13185 GAF domain AKJ08_RS07065 PF04238 Protein of unknown function (DUF420) AKJ08_RS07070 PF02630 SCO1/SenC AKJ08_RS07075 PF01040 UbiA prenyltransferase family AKJ08_RS07080 PF07690 Major Facilitator Superfamily AKJ08_RS07085 PF00484 Carbonic anhydrase AKJ08_RS07090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AKJ08_RS07090 PF00005 ABC transporter AKJ08_RS07095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AKJ08_RS07095 PF00005 ABC transporter AKJ08_RS07100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AKJ08_RS07100 PF00437 Type II/IV secretion system protein AKJ08_RS07105 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS07105 PF12911 N-terminal TM domain of oligopeptide transport permease C AKJ08_RS07110 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS07115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AKJ08_RS07130 PF01618 MotA/TolQ/ExbB proton channel family AKJ08_RS07135 PF02472 Biopolymer transport protein ExbD/TolR AKJ08_RS07150 PF01113 Dihydrodipicolinate reductase, N-terminus AKJ08_RS07160 PF00188 Cysteine-rich secretory protein family AKJ08_RS07170 PF01206 Sulfurtransferase TusA AKJ08_RS07175 PF06965 Na+/H+ antiporter 1 AKJ08_RS07175 PF13462 Thioredoxin AKJ08_RS07190 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS07195 PF04977 Septum formation initiator AKJ08_RS07210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS07210 PF04324 BFD-like [2Fe-2S] binding domain AKJ08_RS07215 PF00535 Glycosyl transferase family 2 AKJ08_RS07260 PF01475 Ferric uptake regulator family AKJ08_RS07270 PF09723 Zinc ribbon domain AKJ08_RS07280 PF01594 AI-2E family transporter AKJ08_RS07290 PF01820 D-ala D-ala ligase N-terminus AKJ08_RS07290 PF07478 D-ala D-ala ligase C-terminus AKJ08_RS07300 PF00490 Delta-aminolevulinic acid dehydratase AKJ08_RS07305 PF03808 Glycosyl transferase WecB/TagA/CpsF family AKJ08_RS07325 PF00731 AIR carboxylase AKJ08_RS07330 PF02843 Phosphoribosylglycinamide synthetase, C domain AKJ08_RS07330 PF02844 Phosphoribosylglycinamide synthetase, N domain AKJ08_RS07330 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AKJ08_RS07335 PF01808 AICARFT/IMPCHase bienzyme AKJ08_RS07335 PF02142 MGS-like domain AKJ08_RS07340 PF04542 Sigma-70 region 2 AKJ08_RS07340 PF04539 Sigma-70 region 3 AKJ08_RS07340 PF04545 Sigma-70, region 4 AKJ08_RS07340 PF00140 Sigma-70 factor, region 1.2 AKJ08_RS07350 PF00069 Protein kinase domain AKJ08_RS07350 PF08308 PEGA domain AKJ08_RS07355 PF00012 Hsp70 protein AKJ08_RS07385 PF00749 tRNA synthetases class I (E and Q), catalytic domain AKJ08_RS07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS07400 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS07405 PF00072 Response regulator receiver domain AKJ08_RS07405 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS07405 PF00158 Sigma-54 interaction domain AKJ08_RS07430 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AKJ08_RS07445 PF07516 SecA Wing and Scaffold domain AKJ08_RS07445 PF01043 SecA preprotein cross-linking domain AKJ08_RS07445 PF07517 SecA DEAD-like domain AKJ08_RS07445 PF02810 SEC-C motif AKJ08_RS07470 PF02872 5'-nucleotidase, C-terminal domain AKJ08_RS07470 PF00149 Calcineurin-like phosphoesterase AKJ08_RS07480 PF00106 short chain dehydrogenase AKJ08_RS07540 PF04542 Sigma-70 region 2 AKJ08_RS07540 PF08281 Sigma-70, region 4 AKJ08_RS07555 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AKJ08_RS07560 PF01638 HxlR-like helix-turn-helix AKJ08_RS07575 PF00158 Sigma-54 interaction domain AKJ08_RS07575 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS07575 PF00072 Response regulator receiver domain AKJ08_RS07605 PF13276 HTH-like domain AKJ08_RS07605 PF00665 Integrase core domain AKJ08_RS07605 PF13333 Integrase core domain AKJ08_RS07620 PF00230 Major intrinsic protein AKJ08_RS07630 PF00857 Isochorismatase family AKJ08_RS07635 PF02522 Aminoglycoside 3-N-acetyltransferase AKJ08_RS07655 PF01734 Patatin-like phospholipase AKJ08_RS07670 PF17191 RecG wedge domain AKJ08_RS07670 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AKJ08_RS07670 PF00270 DEAD/DEAH box helicase AKJ08_RS07685 PF01420 Type I restriction modification DNA specificity domain AKJ08_RS07690 PF12161 HsdM N-terminal domain AKJ08_RS07690 PF02384 N-6 DNA Methylase AKJ08_RS07725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AKJ08_RS07740 PF02817 e3 binding domain AKJ08_RS07740 PF00364 Biotin-requiring enzyme AKJ08_RS07740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKJ08_RS07745 PF02779 Transketolase, pyrimidine binding domain AKJ08_RS07745 PF02780 Transketolase, C-terminal domain AKJ08_RS07750 PF00676 Dehydrogenase E1 component AKJ08_RS07765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AKJ08_RS07765 PF03900 Porphobilinogen deaminase, C-terminal domain AKJ08_RS07770 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AKJ08_RS07770 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AKJ08_RS07770 PF01488 Shikimate / quinate 5-dehydrogenase AKJ08_RS07775 PF01578 Cytochrome C assembly protein AKJ08_RS07785 PF00085 Thioredoxin AKJ08_RS07790 PF01098 Cell cycle protein AKJ08_RS07795 PF03717 Penicillin-binding Protein dimerisation domain AKJ08_RS07795 PF00905 Penicillin binding protein transpeptidase domain AKJ08_RS07815 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS07815 PF00072 Response regulator receiver domain AKJ08_RS07820 PF02545 Maf-like protein AKJ08_RS07835 PF02872 5'-nucleotidase, C-terminal domain AKJ08_RS07835 PF00149 Calcineurin-like phosphoesterase AKJ08_RS07870 PF17782 DprA winged helix domain AKJ08_RS07870 PF02481 DNA recombination-mediator protein A AKJ08_RS07885 PF03884 DNA gyrase inhibitor YacG AKJ08_RS07905 PF02540 NAD synthase AKJ08_RS07905 PF00795 Carbon-nitrogen hydrolase AKJ08_RS07910 PF00072 Response regulator receiver domain AKJ08_RS07910 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS07920 PF01709 Transcriptional regulator AKJ08_RS07935 PF01029 NusB family AKJ08_RS07940 PF00885 6,7-dimethyl-8-ribityllumazine synthase AKJ08_RS07945 PF00925 GTP cyclohydrolase II AKJ08_RS07945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AKJ08_RS07950 PF00677 Lumazine binding domain AKJ08_RS07960 PF01872 RibD C-terminal domain AKJ08_RS07960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AKJ08_RS07965 PF03477 ATP cone domain AKJ08_RS07970 PF00464 Serine hydroxymethyltransferase AKJ08_RS07975 PF02502 Ribose/Galactose Isomerase AKJ08_RS07980 PF02801 Beta-ketoacyl synthase, C-terminal domain AKJ08_RS07980 PF00109 Beta-ketoacyl synthase, N-terminal domain AKJ08_RS07985 PF00550 Phosphopantetheine attachment site AKJ08_RS07995 PF00698 Acyl transferase domain AKJ08_RS08000 PF02504 Fatty acid synthesis protein AKJ08_RS08005 PF01783 Ribosomal L32p protein family AKJ08_RS08015 PF00156 Phosphoribosyl transferase domain AKJ08_RS08015 PF05139 Erythromycin esterase AKJ08_RS08025 PF14306 PUA-like domain AKJ08_RS08025 PF01747 ATP-sulfurylase AKJ08_RS08030 PF04343 Protein of unknown function, DUF488 AKJ08_RS08035 PF01219 Prokaryotic diacylglycerol kinase AKJ08_RS08040 PF00005 ABC transporter AKJ08_RS08040 PF12848 ABC transporter AKJ08_RS08045 PF07690 Major Facilitator Superfamily AKJ08_RS08070 PF00448 SRP54-type protein, GTPase domain AKJ08_RS08070 PF02978 Signal peptide binding domain AKJ08_RS08070 PF02881 SRP54-type protein, helical bundle domain AKJ08_RS08105 PF01694 Rhomboid family AKJ08_RS08110 PF00924 Mechanosensitive ion channel AKJ08_RS08115 PF00849 RNA pseudouridylate synthase AKJ08_RS08125 PF01556 DnaJ C terminal domain AKJ08_RS08125 PF00226 DnaJ domain AKJ08_RS08125 PF00684 DnaJ central domain AKJ08_RS08130 PF10609 NUBPL iron-transfer P-loop NTPase AKJ08_RS08140 PF12390 Selenocysteine synthase N terminal AKJ08_RS08140 PF03841 L-seryl-tRNA selenium transferase AKJ08_RS08145 PF01464 Transglycosylase SLT domain AKJ08_RS08150 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS08150 PF00989 PAS fold AKJ08_RS08155 PF00158 Sigma-54 interaction domain AKJ08_RS08155 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS08155 PF00072 Response regulator receiver domain AKJ08_RS08160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AKJ08_RS08165 PF02021 Uncharacterised protein family UPF0102 AKJ08_RS08175 PF01245 Ribosomal protein L19 AKJ08_RS08180 PF01746 tRNA (Guanine-1)-methyltransferase AKJ08_RS08185 PF05239 PRC-barrel domain AKJ08_RS08185 PF01782 RimM N-terminal domain AKJ08_RS08195 PF00886 Ribosomal protein S16 AKJ08_RS08205 PF00005 ABC transporter AKJ08_RS08210 PF02405 Permease MlaE AKJ08_RS08215 PF01168 Alanine racemase, N-terminal domain AKJ08_RS08215 PF00842 Alanine racemase, C-terminal domain AKJ08_RS08225 PF13439 Glycosyltransferase Family 4 AKJ08_RS08225 PF00534 Glycosyl transferases group 1 AKJ08_RS08240 PF00849 RNA pseudouridylate synthase AKJ08_RS08245 PF00675 Insulinase (Peptidase family M16) AKJ08_RS08245 PF05193 Peptidase M16 inactive domain AKJ08_RS08250 PF05193 Peptidase M16 inactive domain AKJ08_RS08250 PF00675 Insulinase (Peptidase family M16) AKJ08_RS08260 PF03150 Di-haem cytochrome c peroxidase AKJ08_RS08260 PF00034 Cytochrome c AKJ08_RS08275 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS08280 PF00072 Response regulator receiver domain AKJ08_RS08290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS08295 PF00498 FHA domain AKJ08_RS08355 PF00158 Sigma-54 interaction domain AKJ08_RS08355 PF00072 Response regulator receiver domain AKJ08_RS08355 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS08365 PF03958 Bacterial type II/III secretion system short domain AKJ08_RS08365 PF00263 Bacterial type II and III secretion system protein AKJ08_RS08370 PF00437 Type II/IV secretion system protein AKJ08_RS08370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AKJ08_RS08375 PF00482 Type II secretion system (T2SS), protein F AKJ08_RS08385 PF08334 Type II secretion system (T2SS), protein G AKJ08_RS08385 PF07963 Prokaryotic N-terminal methylation motif AKJ08_RS08395 PF07963 Prokaryotic N-terminal methylation motif AKJ08_RS08395 PF02501 Type II secretion system (T2SS), protein I AKJ08_RS08400 PF07963 Prokaryotic N-terminal methylation motif AKJ08_RS08400 PF11612 Type II secretion system (T2SS), protein J AKJ08_RS08425 PF00072 Response regulator receiver domain AKJ08_RS08425 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS08425 PF00158 Sigma-54 interaction domain AKJ08_RS08445 PF13936 Helix-turn-helix domain AKJ08_RS08445 PF00665 Integrase core domain AKJ08_RS08460 PF16859 Tetracyclin repressor-like, C-terminal domain AKJ08_RS08460 PF00440 Bacterial regulatory proteins, tetR family AKJ08_RS08465 PF13533 Biotin-lipoyl like AKJ08_RS08465 PF13533 Biotin-lipoyl like AKJ08_RS08470 PF07690 Major Facilitator Superfamily AKJ08_RS08480 PF03129 Anticodon binding domain AKJ08_RS08480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AKJ08_RS08480 PF04073 Aminoacyl-tRNA editing domain AKJ08_RS08485 PF04551 GcpE protein AKJ08_RS08490 PF06965 Na+/H+ antiporter 1 AKJ08_RS08490 PF13462 Thioredoxin AKJ08_RS08495 PF00579 tRNA synthetases class I (W and Y) AKJ08_RS08505 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AKJ08_RS08515 PF05496 Holliday junction DNA helicase RuvB P-loop domain AKJ08_RS08515 PF05491 RuvB C-terminal winged helix domain AKJ08_RS08515 PF17864 RuvB AAA lid domain AKJ08_RS08520 PF00309 Sigma-54 factor, Activator interacting domain (AID) AKJ08_RS08520 PF04963 Sigma-54 factor, core binding domain AKJ08_RS08520 PF04552 Sigma-54, DNA binding domain AKJ08_RS08525 PF01330 RuvA N terminal domain AKJ08_RS08525 PF07499 RuvA, C-terminal domain AKJ08_RS08530 PF02075 Crossover junction endodeoxyribonuclease RuvC AKJ08_RS08535 PF02445 Quinolinate synthetase A protein AKJ08_RS08550 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKJ08_RS08550 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKJ08_RS08560 PF00814 Glycoprotease family AKJ08_RS08565 PF17820 PDZ domain AKJ08_RS08565 PF02163 Peptidase family M50 AKJ08_RS08570 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AKJ08_RS08570 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AKJ08_RS08570 PF13288 DXP reductoisomerase C-terminal domain AKJ08_RS08580 PF01255 Putative undecaprenyl diphosphate synthase AKJ08_RS08585 PF07714 Protein tyrosine kinase AKJ08_RS08600 PF01695 IstB-like ATP binding protein AKJ08_RS08605 PF13840 ACT domain AKJ08_RS08605 PF00696 Amino acid kinase family AKJ08_RS08605 PF01842 ACT domain AKJ08_RS08610 PF00005 ABC transporter AKJ08_RS08635 PF01192 RNA polymerase Rpb6 AKJ08_RS08640 PF00166 Chaperonin 10 Kd subunit AKJ08_RS08645 PF00118 TCP-1/cpn60 chaperonin family AKJ08_RS08670 PF00462 Glutaredoxin AKJ08_RS08680 PF06470 SMC proteins Flexible Hinge Domain AKJ08_RS08680 PF02463 RecF/RecN/SMC N terminal domain AKJ08_RS08685 PF00005 ABC transporter AKJ08_RS08705 PF00072 Response regulator receiver domain AKJ08_RS08705 PF00158 Sigma-54 interaction domain AKJ08_RS08705 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS08715 PF00027 Cyclic nucleotide-binding domain AKJ08_RS08715 PF13545 Crp-like helix-turn-helix domain AKJ08_RS08720 PF02797 Chalcone and stilbene synthases, C-terminal domain AKJ08_RS08720 PF00195 Chalcone and stilbene synthases, N-terminal domain AKJ08_RS08725 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AKJ08_RS08735 PF00501 AMP-binding enzyme AKJ08_RS08735 PF14535 AMP-binding enzyme C-terminal domain AKJ08_RS08750 PF04542 Sigma-70 region 2 AKJ08_RS08750 PF08281 Sigma-70, region 4 AKJ08_RS08755 PF07136 Protein of unknown function (DUF1385) AKJ08_RS08760 PF01197 Ribosomal protein L31 AKJ08_RS08765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKJ08_RS08765 PF07498 Rho termination factor, N-terminal domain AKJ08_RS08765 PF07497 Rho termination factor, RNA-binding domain AKJ08_RS08770 PF03120 NAD-dependent DNA ligase OB-fold domain AKJ08_RS08770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AKJ08_RS08770 PF01653 NAD-dependent DNA ligase adenylation domain AKJ08_RS08770 PF00533 BRCA1 C Terminus (BRCT) domain AKJ08_RS08770 PF12826 Helix-hairpin-helix motif AKJ08_RS08775 PF00708 Acylphosphatase AKJ08_RS08780 PF00578 AhpC/TSA family AKJ08_RS08790 PF00795 Carbon-nitrogen hydrolase AKJ08_RS08795 PF00999 Sodium/hydrogen exchanger family AKJ08_RS08795 PF02254 TrkA-N domain AKJ08_RS08800 PF00575 S1 RNA binding domain AKJ08_RS08810 PF04225 Opacity-associated protein A LysM-like domain AKJ08_RS08810 PF01551 Peptidase family M23 AKJ08_RS08815 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AKJ08_RS08825 PF17944 Arginine decarboxylase C-terminal helical extension AKJ08_RS08825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AKJ08_RS08825 PF17810 Arginine decarboxylase helical bundle domain AKJ08_RS08830 PF00012 Hsp70 protein AKJ08_RS08840 PF00012 Hsp70 protein AKJ08_RS08855 PF00171 Aldehyde dehydrogenase family AKJ08_RS08860 PF00873 AcrB/AcrD/AcrF family AKJ08_RS08865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKJ08_RS08900 PF08338 Domain of unknown function (DUF1731) AKJ08_RS08900 PF01370 NAD dependent epimerase/dehydratase family AKJ08_RS08905 PF01596 O-methyltransferase AKJ08_RS08910 PF01546 Peptidase family M20/M25/M40 AKJ08_RS08910 PF07687 Peptidase dimerisation domain AKJ08_RS08915 PF00216 Bacterial DNA-binding protein AKJ08_RS08920 PF00128 Alpha amylase, catalytic domain AKJ08_RS08925 PF02446 4-alpha-glucanotransferase AKJ08_RS08930 PF00857 Isochorismatase family AKJ08_RS08940 PF02322 Cytochrome bd terminal oxidase subunit II AKJ08_RS08945 PF01654 Cytochrome bd terminal oxidase subunit I AKJ08_RS08950 PF01554 MatE AKJ08_RS08955 PF00694 Aconitase C-terminal domain AKJ08_RS08955 PF00330 Aconitase family (aconitate hydratase) AKJ08_RS08985 PF00270 DEAD/DEAH box helicase AKJ08_RS08985 PF00271 Helicase conserved C-terminal domain AKJ08_RS08990 PF04542 Sigma-70 region 2 AKJ08_RS08990 PF00140 Sigma-70 factor, region 1.2 AKJ08_RS08990 PF04545 Sigma-70, region 4 AKJ08_RS09020 PF00155 Aminotransferase class I and II AKJ08_RS09025 PF01678 Diaminopimelate epimerase AKJ08_RS09030 PF06230 LpxI C-terminal domain AKJ08_RS09030 PF17930 LpxI N-terminal domain AKJ08_RS09035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKJ08_RS09035 PF02142 MGS-like domain AKJ08_RS09035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AKJ08_RS09040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AKJ08_RS09040 PF00117 Glutamine amidotransferase class-I AKJ08_RS09080 PF00581 Rhodanese-like domain AKJ08_RS09085 PF01336 OB-fold nucleic acid binding domain AKJ08_RS09085 PF07733 Bacterial DNA polymerase III alpha NTPase domain AKJ08_RS09085 PF02811 PHP domain AKJ08_RS09085 PF14579 Helix-hairpin-helix motif AKJ08_RS09085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AKJ08_RS09090 PF14602 Hexapeptide repeat of succinyl-transferase AKJ08_RS09090 PF12804 MobA-like NTP transferase domain AKJ08_RS09090 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS09120 PF00291 Pyridoxal-phosphate dependent enzyme AKJ08_RS09120 PF13291 ACT domain AKJ08_RS09160 PF00005 ABC transporter AKJ08_RS09180 PF00682 HMGL-like AKJ08_RS09180 PF08502 LeuA allosteric (dimerisation) domain AKJ08_RS09190 PF00108 Thiolase, N-terminal domain AKJ08_RS09190 PF02803 Thiolase, C-terminal domain AKJ08_RS09200 PF00180 Isocitrate/isopropylmalate dehydrogenase AKJ08_RS09210 PF00330 Aconitase family (aconitate hydratase) AKJ08_RS09220 PF00902 Sec-independent protein translocase protein (TatC) AKJ08_RS09225 PF02416 mttA/Hcf106 family AKJ08_RS09230 PF00850 Histone deacetylase domain AKJ08_RS09235 PF00775 Dioxygenase AKJ08_RS09235 PF04444 Catechol dioxygenase N terminus AKJ08_RS09240 PF17092 Penicillin-binding protein OB-like domain AKJ08_RS09240 PF00912 Transglycosylase AKJ08_RS09240 PF00905 Penicillin binding protein transpeptidase domain AKJ08_RS09245 PF01555 DNA methylase AKJ08_RS09250 PF00849 RNA pseudouridylate synthase AKJ08_RS09250 PF01479 S4 domain AKJ08_RS09265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AKJ08_RS09265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AKJ08_RS09275 PF00043 Glutathione S-transferase, C-terminal domain AKJ08_RS09275 PF02798 Glutathione S-transferase, N-terminal domain AKJ08_RS09295 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AKJ08_RS09295 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS09300 PF07977 FabA-like domain AKJ08_RS09305 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS09305 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AKJ08_RS09315 PF07244 Surface antigen variable number repeat AKJ08_RS09315 PF01103 Surface antigen AKJ08_RS09325 PF00501 AMP-binding enzyme AKJ08_RS09330 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS09330 PF02190 ATP-dependent protease La (LON) substrate-binding domain AKJ08_RS09330 PF05362 Lon protease (S16) C-terminal proteolytic domain AKJ08_RS09335 PF00583 Acetyltransferase (GNAT) family AKJ08_RS09345 PF00437 Type II/IV secretion system protein AKJ08_RS09350 PF03958 Bacterial type II/III secretion system short domain AKJ08_RS09350 PF00263 Bacterial type II and III secretion system protein AKJ08_RS09370 PF02092 Glycyl-tRNA synthetase beta subunit AKJ08_RS09370 PF05746 DALR anticodon binding domain AKJ08_RS09375 PF02091 Glycyl-tRNA synthetase alpha subunit AKJ08_RS09390 PF00575 S1 RNA binding domain AKJ08_RS09395 PF02401 LytB protein AKJ08_RS09400 PF02224 Cytidylate kinase AKJ08_RS09405 PF00155 Aminotransferase class I and II AKJ08_RS09410 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AKJ08_RS09420 PF13538 UvrD-like helicase C-terminal domain AKJ08_RS09430 PF03129 Anticodon binding domain AKJ08_RS09430 PF13393 Histidyl-tRNA synthetase AKJ08_RS09435 PF02666 Phosphatidylserine decarboxylase AKJ08_RS09465 PF00578 AhpC/TSA family AKJ08_RS09475 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKJ08_RS09475 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKJ08_RS09525 PF01196 Ribosomal protein L17 AKJ08_RS09530 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AKJ08_RS09530 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AKJ08_RS09530 PF01000 RNA polymerase Rpb3/RpoA insert domain AKJ08_RS09535 PF00163 Ribosomal protein S4/S9 N-terminal domain AKJ08_RS09535 PF01479 S4 domain AKJ08_RS09540 PF00411 Ribosomal protein S11 AKJ08_RS09545 PF00416 Ribosomal protein S13/S18 AKJ08_RS09550 PF00444 Ribosomal protein L36 AKJ08_RS09555 PF00557 Metallopeptidase family M24 AKJ08_RS09560 PF05191 Adenylate kinase, active site lid AKJ08_RS09565 PF00344 SecY translocase AKJ08_RS09570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AKJ08_RS09575 PF00327 Ribosomal protein L30p/L7e AKJ08_RS09580 PF00333 Ribosomal protein S5, N-terminal domain AKJ08_RS09580 PF03719 Ribosomal protein S5, C-terminal domain AKJ08_RS09585 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AKJ08_RS09590 PF00347 Ribosomal protein L6 AKJ08_RS09595 PF00410 Ribosomal protein S8 AKJ08_RS09600 PF00253 Ribosomal protein S14p/S29e AKJ08_RS09605 PF00673 ribosomal L5P family C-terminus AKJ08_RS09605 PF00281 Ribosomal protein L5 AKJ08_RS09610 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AKJ08_RS09610 PF00467 KOW motif AKJ08_RS09615 PF00238 Ribosomal protein L14p/L23e AKJ08_RS09620 PF00366 Ribosomal protein S17 AKJ08_RS09625 PF00831 Ribosomal L29 protein AKJ08_RS09630 PF00252 Ribosomal protein L16p/L10e AKJ08_RS09635 PF07650 KH domain AKJ08_RS09635 PF00189 Ribosomal protein S3, C-terminal domain AKJ08_RS09640 PF00237 Ribosomal protein L22p/L17e AKJ08_RS09645 PF00203 Ribosomal protein S19 AKJ08_RS09650 PF00181 Ribosomal Proteins L2, RNA binding domain AKJ08_RS09650 PF03947 Ribosomal Proteins L2, C-terminal domain AKJ08_RS09655 PF00276 Ribosomal protein L23 AKJ08_RS09660 PF00573 Ribosomal protein L4/L1 family AKJ08_RS09665 PF00338 Ribosomal protein S10p/S20e AKJ08_RS09670 PF03144 Elongation factor Tu domain 2 AKJ08_RS09670 PF03143 Elongation factor Tu C-terminal domain AKJ08_RS09670 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS09675 PF03764 Elongation factor G, domain IV AKJ08_RS09675 PF14492 Elongation Factor G, domain II AKJ08_RS09675 PF03144 Elongation factor Tu domain 2 AKJ08_RS09675 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS09675 PF00679 Elongation factor G C-terminus AKJ08_RS09680 PF00177 Ribosomal protein S7p/S5e AKJ08_RS09685 PF00164 Ribosomal protein S12/S23 AKJ08_RS09700 PF00795 Carbon-nitrogen hydrolase AKJ08_RS09730 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AKJ08_RS09730 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKJ08_RS09750 PF13180 PDZ domain AKJ08_RS09755 PF01025 GrpE AKJ08_RS09765 PF01434 Peptidase family M41 AKJ08_RS09765 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS09765 PF17862 AAA+ lid domain AKJ08_RS09765 PF06480 FtsH Extracellular AKJ08_RS09775 PF01979 Amidohydrolase family AKJ08_RS09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS09795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AKJ08_RS09795 PF00072 Response regulator receiver domain AKJ08_RS09795 PF01627 Hpt domain AKJ08_RS09795 PF00672 HAMP domain AKJ08_RS09795 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS09800 PF00072 Response regulator receiver domain AKJ08_RS09805 PF00072 Response regulator receiver domain AKJ08_RS09805 PF01339 CheB methylesterase AKJ08_RS09810 PF00672 HAMP domain AKJ08_RS09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS09810 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS09810 PF01627 Hpt domain AKJ08_RS09810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AKJ08_RS09810 PF00072 Response regulator receiver domain AKJ08_RS09815 PF00072 Response regulator receiver domain AKJ08_RS09815 PF01339 CheB methylesterase AKJ08_RS09820 PF00891 O-methyltransferase domain AKJ08_RS09820 PF16864 Dimerisation domain AKJ08_RS09825 PF00266 Aminotransferase class-V AKJ08_RS09830 PF03301 Tryptophan 2,3-dioxygenase AKJ08_RS09835 PF01175 Urocanase Rossmann-like domain AKJ08_RS09835 PF17391 Urocanase N-terminal domain AKJ08_RS09835 PF17392 Urocanase C-terminal domain AKJ08_RS09840 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AKJ08_RS09845 PF01256 Carbohydrate kinase AKJ08_RS09845 PF03853 YjeF-related protein N-terminus AKJ08_RS09850 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AKJ08_RS09855 PF00364 Biotin-requiring enzyme AKJ08_RS09855 PF00561 alpha/beta hydrolase fold AKJ08_RS09860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AKJ08_RS09860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AKJ08_RS09860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AKJ08_RS09860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AKJ08_RS09865 PF01063 Amino-transferase class IV AKJ08_RS09875 PF02457 DisA bacterial checkpoint controller nucleotide-binding AKJ08_RS09880 PF00809 Pterin binding enzyme AKJ08_RS09885 PF06480 FtsH Extracellular AKJ08_RS09885 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS09885 PF17862 AAA+ lid domain AKJ08_RS09885 PF01434 Peptidase family M41 AKJ08_RS09890 PF11734 TilS substrate C-terminal domain AKJ08_RS09890 PF01171 PP-loop family AKJ08_RS09890 PF09179 TilS substrate binding domain AKJ08_RS09905 PF05853 beta-keto acid cleavage enzyme AKJ08_RS09910 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS09915 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AKJ08_RS09915 PF12833 Helix-turn-helix domain AKJ08_RS09930 PF03061 Thioesterase superfamily AKJ08_RS09960 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AKJ08_RS09970 PF02310 B12 binding domain AKJ08_RS09970 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase AKJ08_RS09975 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit AKJ08_RS09985 PF13419 Haloacid dehalogenase-like hydrolase AKJ08_RS10005 PF16200 C-terminal region of band_7 AKJ08_RS10005 PF01145 SPFH domain / Band 7 family AKJ08_RS10010 PF01343 Peptidase family S49 AKJ08_RS10015 PF03167 Uracil DNA glycosylase superfamily AKJ08_RS10025 PF04127 DNA / pantothenate metabolism flavoprotein AKJ08_RS10025 PF02441 Flavoprotein AKJ08_RS10050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AKJ08_RS10050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AKJ08_RS10055 PF04542 Sigma-70 region 2 AKJ08_RS10055 PF08281 Sigma-70, region 4 AKJ08_RS10065 PF00072 Response regulator receiver domain AKJ08_RS10065 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS10080 PF03309 Type III pantothenate kinase AKJ08_RS10085 PF08279 HTH domain AKJ08_RS10085 PF03099 Biotin/lipoate A/B protein ligase family AKJ08_RS10085 PF02237 Biotin protein ligase C terminal domain AKJ08_RS10095 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AKJ08_RS10095 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AKJ08_RS10100 PF08264 Anticodon-binding domain of tRNA AKJ08_RS10100 PF00133 tRNA synthetases class I (I, L, M and V) AKJ08_RS10100 PF10458 Valyl tRNA synthetase tRNA binding arm AKJ08_RS10105 PF14332 Domain of unknown function (DUF4388) AKJ08_RS10105 PF00072 Response regulator receiver domain AKJ08_RS10115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AKJ08_RS10115 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKJ08_RS10115 PF00034 Cytochrome c AKJ08_RS10120 PF05000 RNA polymerase Rpb1, domain 4 AKJ08_RS10120 PF04998 RNA polymerase Rpb1, domain 5 AKJ08_RS10120 PF04983 RNA polymerase Rpb1, domain 3 AKJ08_RS10120 PF04997 RNA polymerase Rpb1, domain 1 AKJ08_RS10120 PF00623 RNA polymerase Rpb1, domain 2 AKJ08_RS10125 PF04565 RNA polymerase Rpb2, domain 3 AKJ08_RS10125 PF04560 RNA polymerase Rpb2, domain 7 AKJ08_RS10125 PF00562 RNA polymerase Rpb2, domain 6 AKJ08_RS10125 PF04563 RNA polymerase beta subunit AKJ08_RS10125 PF10385 RNA polymerase beta subunit external 1 domain AKJ08_RS10125 PF04561 RNA polymerase Rpb2, domain 2 AKJ08_RS10130 PF16320 Ribosomal protein L7/L12 dimerisation domain AKJ08_RS10130 PF00542 Ribosomal protein L7/L12 C-terminal domain AKJ08_RS10135 PF00466 Ribosomal protein L10 AKJ08_RS10140 PF00687 Ribosomal protein L1p/L10e family AKJ08_RS10145 PF00298 Ribosomal protein L11, RNA binding domain AKJ08_RS10145 PF03946 Ribosomal protein L11, N-terminal domain AKJ08_RS10150 PF02357 Transcription termination factor nusG AKJ08_RS10150 PF00467 KOW motif AKJ08_RS10165 PF00471 Ribosomal protein L33 AKJ08_RS10170 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS10170 PF03144 Elongation factor Tu domain 2 AKJ08_RS10170 PF03143 Elongation factor Tu C-terminal domain AKJ08_RS10195 PF08032 RNA 2'-O ribose methyltransferase substrate binding AKJ08_RS10195 PF00588 SpoU rRNA Methylase family AKJ08_RS10205 PF08443 RimK-like ATP-grasp domain AKJ08_RS10205 PF18030 RimK PreATP-grasp domain AKJ08_RS10220 PF00012 Hsp70 protein AKJ08_RS10230 PF13638 PIN domain AKJ08_RS10230 PF02562 PhoH-like protein AKJ08_RS10255 PF12464 Maltose acetyltransferase AKJ08_RS10255 PF14602 Hexapeptide repeat of succinyl-transferase AKJ08_RS10270 PF05567 Neisseria PilC beta-propeller domain AKJ08_RS10310 PF02779 Transketolase, pyrimidine binding domain AKJ08_RS10310 PF02780 Transketolase, C-terminal domain AKJ08_RS10320 PF01066 CDP-alcohol phosphatidyltransferase AKJ08_RS10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS10345 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS10355 PF00488 MutS domain V AKJ08_RS10355 PF01713 Smr domain AKJ08_RS10365 PF00575 S1 RNA binding domain AKJ08_RS10365 PF17876 Cold shock domain AKJ08_RS10365 PF08461 Ribonuclease R winged-helix domain AKJ08_RS10365 PF08206 Ribonuclease B OB domain AKJ08_RS10365 PF00773 RNB domain AKJ08_RS10375 PF13411 MerR HTH family regulatory protein AKJ08_RS10380 PF00293 NUDIX domain AKJ08_RS10380 PF03099 Biotin/lipoate A/B protein ligase family AKJ08_RS10385 PF00676 Dehydrogenase E1 component AKJ08_RS10390 PF02817 e3 binding domain AKJ08_RS10390 PF00364 Biotin-requiring enzyme AKJ08_RS10390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AKJ08_RS10395 PF02779 Transketolase, pyrimidine binding domain AKJ08_RS10395 PF02780 Transketolase, C-terminal domain AKJ08_RS10400 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AKJ08_RS10400 PF04055 Radical SAM superfamily AKJ08_RS10405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS10405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AKJ08_RS10415 PF00171 Aldehyde dehydrogenase family AKJ08_RS10420 PF01266 FAD dependent oxidoreductase AKJ08_RS10420 PF05690 Thiazole biosynthesis protein ThiG AKJ08_RS10425 PF00072 Response regulator receiver domain AKJ08_RS10425 PF01966 HD domain AKJ08_RS10430 PF06689 ClpX C4-type zinc finger AKJ08_RS10430 PF10431 C-terminal, D2-small domain, of ClpB protein AKJ08_RS10430 PF07724 AAA domain (Cdc48 subfamily) AKJ08_RS10445 PF01416 tRNA pseudouridine synthase AKJ08_RS10455 PF02540 NAD synthase AKJ08_RS10460 PF01747 ATP-sulfurylase AKJ08_RS10460 PF14306 PUA-like domain AKJ08_RS10475 PF00899 ThiF family AKJ08_RS10480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS10480 PF07730 Histidine kinase AKJ08_RS10485 PF00072 Response regulator receiver domain AKJ08_RS10485 PF00196 Bacterial regulatory proteins, luxR family AKJ08_RS10500 PF01012 Electron transfer flavoprotein domain AKJ08_RS10500 PF00766 Electron transfer flavoprotein FAD-binding domain AKJ08_RS10505 PF01012 Electron transfer flavoprotein domain AKJ08_RS10510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS10510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS10510 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS10515 PF00440 Bacterial regulatory proteins, tetR family AKJ08_RS10515 PF08359 YsiA-like protein, C-terminal region AKJ08_RS10540 PF07859 alpha/beta hydrolase fold AKJ08_RS10545 PF00923 Transaldolase/Fructose-6-phosphate aldolase AKJ08_RS10550 PF01380 SIS domain AKJ08_RS10550 PF00571 CBS domain AKJ08_RS10565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AKJ08_RS10570 PF01557 Fumarylacetoacetate (FAA) hydrolase family AKJ08_RS10575 PF01113 Dihydrodipicolinate reductase, N-terminus AKJ08_RS10575 PF05173 Dihydrodipicolinate reductase, C-terminus AKJ08_RS10580 PF00701 Dihydrodipicolinate synthetase family AKJ08_RS10595 PF07670 Nucleoside recognition AKJ08_RS10600 PF07670 Nucleoside recognition AKJ08_RS10605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AKJ08_RS10620 PF00849 RNA pseudouridylate synthase AKJ08_RS10620 PF01479 S4 domain AKJ08_RS10645 PF02683 Cytochrome C biogenesis protein transmembrane region AKJ08_RS10655 PF08281 Sigma-70, region 4 AKJ08_RS10655 PF04542 Sigma-70 region 2 AKJ08_RS10665 PF00483 Nucleotidyl transferase AKJ08_RS10670 PF04851 Type III restriction enzyme, res subunit AKJ08_RS10670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AKJ08_RS10670 PF18074 Primosomal protein N C-terminal domain AKJ08_RS10670 PF17764 3′ DNA-binding domain (3′BD) AKJ08_RS10670 PF00271 Helicase conserved C-terminal domain AKJ08_RS10675 PF01327 Polypeptide deformylase AKJ08_RS10680 PF00730 HhH-GPD superfamily base excision DNA repair protein AKJ08_RS10680 PF00633 Helix-hairpin-helix motif AKJ08_RS10685 PF01212 Beta-eliminating lyase AKJ08_RS10695 PF01066 CDP-alcohol phosphatidyltransferase AKJ08_RS10700 PF04608 Phosphatidylglycerophosphatase A AKJ08_RS10705 PF00994 Probable molybdopterin binding domain AKJ08_RS10705 PF02464 Competence-damaged protein AKJ08_RS10720 PF03055 Retinal pigment epithelial membrane protein AKJ08_RS10725 PF13977 BetI-type transcriptional repressor, C-terminal AKJ08_RS10725 PF00440 Bacterial regulatory proteins, tetR family AKJ08_RS10735 PF00154 recA bacterial DNA recombination protein AKJ08_RS10740 PF01078 Magnesium chelatase, subunit ChlI AKJ08_RS10740 PF13335 Magnesium chelatase, subunit ChlI C-terminal AKJ08_RS10745 PF12105 SpoU, rRNA methylase, C-terminal AKJ08_RS10745 PF00588 SpoU rRNA Methylase family AKJ08_RS10750 PF02563 Polysaccharide biosynthesis/export protein AKJ08_RS10765 PF00025 ADP-ribosylation factor family AKJ08_RS10775 PF01712 Deoxynucleoside kinase AKJ08_RS10780 PF02548 Ketopantoate hydroxymethyltransferase AKJ08_RS10785 PF02569 Pantoate-beta-alanine ligase AKJ08_RS10790 PF01668 SmpB protein AKJ08_RS10795 PF01171 PP-loop family AKJ08_RS10800 PF00398 Ribosomal RNA adenine dimethylase AKJ08_RS10805 PF00814 Glycoprotease family AKJ08_RS10810 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS10810 PF00072 Response regulator receiver domain AKJ08_RS10820 PF00588 SpoU rRNA Methylase family AKJ08_RS10835 PF00483 Nucleotidyl transferase AKJ08_RS10840 PF01636 Phosphotransferase enzyme family AKJ08_RS10845 PF00535 Glycosyl transferase family 2 AKJ08_RS10875 PF00571 CBS domain AKJ08_RS10875 PF00291 Pyridoxal-phosphate dependent enzyme AKJ08_RS10880 PF01053 Cys/Met metabolism PLP-dependent enzyme AKJ08_RS10890 PF00005 ABC transporter AKJ08_RS10905 PF10672 S-adenosylmethionine-dependent methyltransferase AKJ08_RS10905 PF17785 PUA-like domain AKJ08_RS10915 PF00152 tRNA synthetases class II (D, K and N) AKJ08_RS10925 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AKJ08_RS10925 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKJ08_RS10930 PF05762 VWA domain containing CoxE-like protein AKJ08_RS10935 PF07728 AAA domain (dynein-related subfamily) AKJ08_RS10935 PF17868 AAA lid domain AKJ08_RS10935 PF12592 Protein of unknown function (DUF3763) AKJ08_RS10940 PF00069 Protein kinase domain AKJ08_RS10955 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS10960 PF00682 HMGL-like AKJ08_RS10960 PF02436 Conserved carboxylase domain AKJ08_RS10960 PF00364 Biotin-requiring enzyme AKJ08_RS10965 PF02785 Biotin carboxylase C-terminal domain AKJ08_RS10965 PF00289 Biotin carboxylase, N-terminal domain AKJ08_RS10965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AKJ08_RS10970 PF00313 'Cold-shock' DNA-binding domain AKJ08_RS10975 PF12327 FtsZ family, C-terminal domain AKJ08_RS10975 PF00091 Tubulin/FtsZ family, GTPase domain AKJ08_RS10980 PF02491 SHS2 domain inserted in FTSA AKJ08_RS10985 PF08478 POTRA domain, FtsQ-type AKJ08_RS10985 PF03799 Cell division protein FtsQ AKJ08_RS10995 PF02661 Fic/DOC family AKJ08_RS11000 PF01820 D-ala D-ala ligase N-terminus AKJ08_RS11000 PF07478 D-ala D-ala ligase C-terminus AKJ08_RS11005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AKJ08_RS11005 PF01565 FAD binding domain AKJ08_RS11010 PF08245 Mur ligase middle domain AKJ08_RS11010 PF02875 Mur ligase family, glutamate ligase domain AKJ08_RS11010 PF01225 Mur ligase family, catalytic domain AKJ08_RS11015 PF03033 Glycosyltransferase family 28 N-terminal domain AKJ08_RS11015 PF04101 Glycosyltransferase family 28 C-terminal domain AKJ08_RS11020 PF01098 Cell cycle protein AKJ08_RS11025 PF02875 Mur ligase family, glutamate ligase domain AKJ08_RS11025 PF08245 Mur ligase middle domain AKJ08_RS11030 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AKJ08_RS11030 PF00953 Glycosyl transferase family 4 AKJ08_RS11035 PF08245 Mur ligase middle domain AKJ08_RS11035 PF01225 Mur ligase family, catalytic domain AKJ08_RS11035 PF02875 Mur ligase family, glutamate ligase domain AKJ08_RS11040 PF08245 Mur ligase middle domain AKJ08_RS11040 PF02875 Mur ligase family, glutamate ligase domain AKJ08_RS11040 PF01225 Mur ligase family, catalytic domain AKJ08_RS11045 PF03717 Penicillin-binding Protein dimerisation domain AKJ08_RS11045 PF00905 Penicillin binding protein transpeptidase domain AKJ08_RS11050 PF04977 Septum formation initiator AKJ08_RS11055 PF01795 MraW methylase family AKJ08_RS11065 PF02381 MraZ protein, putative antitoxin-like AKJ08_RS11070 PF00534 Glycosyl transferases group 1 AKJ08_RS11085 PF00561 alpha/beta hydrolase fold AKJ08_RS11095 PF02233 NAD(P) transhydrogenase beta subunit AKJ08_RS11105 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AKJ08_RS11105 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AKJ08_RS11110 PF00072 Response regulator receiver domain AKJ08_RS11130 PF00465 Iron-containing alcohol dehydrogenase AKJ08_RS11135 PF00120 Glutamine synthetase, catalytic domain AKJ08_RS11135 PF03951 Glutamine synthetase, beta-Grasp domain AKJ08_RS11140 PF00958 GMP synthase C terminal domain AKJ08_RS11140 PF00117 Glutamine amidotransferase class-I AKJ08_RS11145 PF00171 Aldehyde dehydrogenase family AKJ08_RS11165 PF00691 OmpA family AKJ08_RS11170 PF00905 Penicillin binding protein transpeptidase domain AKJ08_RS11170 PF17092 Penicillin-binding protein OB-like domain AKJ08_RS11170 PF00912 Transglycosylase AKJ08_RS11185 PF04384 Iron-sulphur cluster assembly AKJ08_RS11190 PF00111 2Fe-2S iron-sulfur cluster binding domain AKJ08_RS11195 PF00012 Hsp70 protein AKJ08_RS11200 PF07743 HSCB C-terminal oligomerisation domain AKJ08_RS11205 PF01521 Iron-sulphur cluster biosynthesis AKJ08_RS11210 PF01592 NifU-like N terminal domain AKJ08_RS11215 PF00266 Aminotransferase class-V AKJ08_RS11220 PF02683 Cytochrome C biogenesis protein transmembrane region AKJ08_RS11220 PF13098 Thioredoxin-like domain AKJ08_RS11220 PF11412 Disulphide bond corrector protein DsbC AKJ08_RS11225 PF00069 Protein kinase domain AKJ08_RS11260 PF13493 Domain of unknown function (DUF4118) AKJ08_RS11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS11260 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS11260 PF00989 PAS fold AKJ08_RS11260 PF13426 PAS domain AKJ08_RS11260 PF08447 PAS fold AKJ08_RS11265 PF00675 Insulinase (Peptidase family M16) AKJ08_RS11265 PF05193 Peptidase M16 inactive domain AKJ08_RS11290 PF03572 Peptidase family S41 AKJ08_RS11290 PF13180 PDZ domain AKJ08_RS11305 PF00156 Phosphoribosyl transferase domain AKJ08_RS11310 PF08544 GHMP kinases C terminal AKJ08_RS11310 PF00288 GHMP kinases N terminal domain AKJ08_RS11315 PF04026 SpoVG AKJ08_RS11320 PF14572 Phosphoribosyl synthetase-associated domain AKJ08_RS11320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AKJ08_RS11325 PF14693 Ribosomal protein TL5, C-terminal domain AKJ08_RS11325 PF01386 Ribosomal L25p family AKJ08_RS11330 PF01195 Peptidyl-tRNA hydrolase AKJ08_RS11335 PF01250 Ribosomal protein S6 AKJ08_RS11340 PF01084 Ribosomal protein S18 AKJ08_RS11345 PF01281 Ribosomal protein L9, N-terminal domain AKJ08_RS11345 PF03948 Ribosomal protein L9, C-terminal domain AKJ08_RS11350 PF03796 DnaB-like helicase C terminal domain AKJ08_RS11350 PF00772 DnaB-like helicase N terminal domain AKJ08_RS11370 PF08543 Phosphomethylpyrimidine kinase AKJ08_RS11375 PF07722 Peptidase C26 AKJ08_RS11380 PF02581 Thiamine monophosphate synthase AKJ08_RS11395 PF00535 Glycosyl transferase family 2 AKJ08_RS11410 PF02861 Clp amino terminal domain, pathogenicity island component AKJ08_RS11410 PF10431 C-terminal, D2-small domain, of ClpB protein AKJ08_RS11410 PF07724 AAA domain (Cdc48 subfamily) AKJ08_RS11410 PF17871 AAA lid domain AKJ08_RS11410 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS11420 PF01738 Dienelactone hydrolase family AKJ08_RS11420 PF00156 Phosphoribosyl transferase domain AKJ08_RS11430 PF01416 tRNA pseudouridine synthase AKJ08_RS11435 PF16124 RecQ zinc-binding AKJ08_RS11435 PF16124 RecQ zinc-binding AKJ08_RS11435 PF00570 HRDC domain AKJ08_RS11435 PF09382 RQC domain AKJ08_RS11435 PF00270 DEAD/DEAH box helicase AKJ08_RS11435 PF00271 Helicase conserved C-terminal domain AKJ08_RS11435 PF00570 HRDC domain AKJ08_RS11435 PF00270 DEAD/DEAH box helicase AKJ08_RS11435 PF09382 RQC domain AKJ08_RS11435 PF00271 Helicase conserved C-terminal domain AKJ08_RS11440 PF00472 RF-1 domain AKJ08_RS11440 PF03462 PCRF domain AKJ08_RS11445 PF17827 PrmC N-terminal domain AKJ08_RS11445 PF05175 Methyltransferase small domain AKJ08_RS11450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AKJ08_RS11485 PF01541 GIY-YIG catalytic domain AKJ08_RS11500 PF05987 Bacterial protein of unknown function (DUF898) AKJ08_RS11505 PF01435 Peptidase family M48 AKJ08_RS11530 PF01209 ubiE/COQ5 methyltransferase family AKJ08_RS11600 PF07732 Multicopper oxidase AKJ08_RS11600 PF07731 Multicopper oxidase AKJ08_RS11605 PF09278 MerR, DNA binding AKJ08_RS11605 PF00376 MerR family regulatory protein AKJ08_RS11610 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AKJ08_RS11615 PF00106 short chain dehydrogenase AKJ08_RS11625 PF13677 Membrane MotB of proton-channel complex MotA/MotB AKJ08_RS11625 PF00691 OmpA family AKJ08_RS11645 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS11645 PF08448 PAS fold AKJ08_RS11650 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS11650 PF08448 PAS fold AKJ08_RS11675 PF03851 UV-endonuclease UvdE AKJ08_RS11680 PF02368 Bacterial Ig-like domain (group 2) AKJ08_RS11680 PF11999 Protein of unknown function (DUF3494) AKJ08_RS11710 PF13419 Haloacid dehalogenase-like hydrolase AKJ08_RS11730 PF01451 Low molecular weight phosphotyrosine protein phosphatase AKJ08_RS11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS11740 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS11745 PF13649 Methyltransferase domain AKJ08_RS11750 PF12697 Alpha/beta hydrolase family AKJ08_RS11755 PF00155 Aminotransferase class I and II AKJ08_RS11765 PF13419 Haloacid dehalogenase-like hydrolase AKJ08_RS11775 PF02190 ATP-dependent protease La (LON) substrate-binding domain AKJ08_RS11775 PF05362 Lon protease (S16) C-terminal proteolytic domain AKJ08_RS11775 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS11780 PF00672 HAMP domain AKJ08_RS11780 PF00989 PAS fold AKJ08_RS11780 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS11780 PF18698 Histidine kinase sensor domain AKJ08_RS11785 PF13180 PDZ domain AKJ08_RS11795 PF00571 CBS domain AKJ08_RS11795 PF03448 MgtE intracellular N domain AKJ08_RS11795 PF01769 Divalent cation transporter AKJ08_RS11805 PF00149 Calcineurin-like phosphoesterase AKJ08_RS11810 PF09371 Tex-like protein N-terminal domain AKJ08_RS11810 PF00575 S1 RNA binding domain AKJ08_RS11810 PF17674 HHH domain AKJ08_RS11810 PF16921 Tex protein YqgF-like domain AKJ08_RS11815 PF00924 Mechanosensitive ion channel AKJ08_RS11820 PF00698 Acyl transferase domain AKJ08_RS11820 PF03060 Nitronate monooxygenase AKJ08_RS11825 PF02801 Beta-ketoacyl synthase, C-terminal domain AKJ08_RS11825 PF14765 Polyketide synthase dehydratase AKJ08_RS11825 PF00668 Condensation domain AKJ08_RS11825 PF00550 Phosphopantetheine attachment site AKJ08_RS11825 PF16197 Ketoacyl-synthetase C-terminal extension AKJ08_RS11825 PF13193 AMP-binding enzyme C-terminal domain AKJ08_RS11825 PF00501 AMP-binding enzyme AKJ08_RS11825 PF08659 KR domain AKJ08_RS11825 PF00109 Beta-ketoacyl synthase, N-terminal domain AKJ08_RS11830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AKJ08_RS11830 PF00108 Thiolase, N-terminal domain AKJ08_RS11835 PF00561 alpha/beta hydrolase fold AKJ08_RS11840 PF00501 AMP-binding enzyme AKJ08_RS11845 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AKJ08_RS11860 PF02080 TrkA-C domain AKJ08_RS11860 PF03471 Transporter associated domain AKJ08_RS11860 PF00999 Sodium/hydrogen exchanger family AKJ08_RS11875 PF02374 Anion-transporting ATPase AKJ08_RS11885 PF00005 ABC transporter AKJ08_RS11890 PF00271 Helicase conserved C-terminal domain AKJ08_RS11890 PF00270 DEAD/DEAH box helicase AKJ08_RS11890 PF03880 DbpA RNA binding domain AKJ08_RS11895 PF03372 Endonuclease/Exonuclease/phosphatase family AKJ08_RS11910 PF00690 Cation transporter/ATPase, N-terminus AKJ08_RS11910 PF00689 Cation transporting ATPase, C-terminus AKJ08_RS11915 PF00563 EAL domain AKJ08_RS11915 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS11915 PF00072 Response regulator receiver domain AKJ08_RS11965 PF00005 ABC transporter AKJ08_RS11970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AKJ08_RS11970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AKJ08_RS11970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AKJ08_RS11970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AKJ08_RS11985 PF02789 Cytosol aminopeptidase family, N-terminal domain AKJ08_RS11985 PF00883 Cytosol aminopeptidase family, catalytic domain AKJ08_RS11990 PF11999 Protein of unknown function (DUF3494) AKJ08_RS11990 PF02368 Bacterial Ig-like domain (group 2) AKJ08_RS11995 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AKJ08_RS12005 PF16123 Hydroxyacylglutathione hydrolase C-terminus AKJ08_RS12005 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS12025 PF01435 Peptidase family M48 AKJ08_RS12035 PF01343 Peptidase family S49 AKJ08_RS12040 PF07497 Rho termination factor, RNA-binding domain AKJ08_RS12040 PF07498 Rho termination factor, N-terminal domain AKJ08_RS12040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKJ08_RS12045 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS12045 PF00072 Response regulator receiver domain AKJ08_RS12050 PF16736 Single Cache-like AKJ08_RS12050 PF00989 PAS fold AKJ08_RS12050 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS12060 PF02335 Cytochrome c552 AKJ08_RS12065 PF00672 HAMP domain AKJ08_RS12065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS12065 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS12065 PF01627 Hpt domain AKJ08_RS12065 PF00072 Response regulator receiver domain AKJ08_RS12065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AKJ08_RS12075 PF12849 PBP superfamily domain AKJ08_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS12085 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS12090 PF00005 ABC transporter AKJ08_RS12095 PF01895 PhoU domain AKJ08_RS12100 PF01112 Asparaginase AKJ08_RS12120 PF03466 LysR substrate binding domain AKJ08_RS12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS12155 PF00248 Aldo/keto reductase family AKJ08_RS12180 PF01618 MotA/TolQ/ExbB proton channel family AKJ08_RS12185 PF02472 Biopolymer transport protein ExbD/TolR AKJ08_RS12205 PF00072 Response regulator receiver domain AKJ08_RS12205 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS12230 PF01618 MotA/TolQ/ExbB proton channel family AKJ08_RS12295 PF00732 GMC oxidoreductase AKJ08_RS12295 PF05199 GMC oxidoreductase AKJ08_RS12350 PF01966 HD domain AKJ08_RS12380 PF04452 RNA methyltransferase AKJ08_RS12390 PF05193 Peptidase M16 inactive domain AKJ08_RS12390 PF00675 Insulinase (Peptidase family M16) AKJ08_RS12400 PF04055 Radical SAM superfamily AKJ08_RS12415 PF01380 SIS domain AKJ08_RS12420 PF14602 Hexapeptide repeat of succinyl-transferase AKJ08_RS12420 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS12420 PF12804 MobA-like NTP transferase domain AKJ08_RS12425 PF00196 Bacterial regulatory proteins, luxR family AKJ08_RS12425 PF00072 Response regulator receiver domain AKJ08_RS12445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS12450 PF04002 RadC-like JAB domain AKJ08_RS12460 PF00270 DEAD/DEAH box helicase AKJ08_RS12460 PF09382 RQC domain AKJ08_RS12460 PF16124 RecQ zinc-binding AKJ08_RS12460 PF00271 Helicase conserved C-terminal domain AKJ08_RS12460 PF00570 HRDC domain AKJ08_RS12480 PF00436 Single-strand binding protein family AKJ08_RS12485 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AKJ08_RS12490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AKJ08_RS12495 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS12500 PF00528 Binding-protein-dependent transport system inner membrane component AKJ08_RS12500 PF12911 N-terminal TM domain of oligopeptide transport permease C AKJ08_RS12505 PF03631 Virulence factor BrkB AKJ08_RS12515 PF06508 Queuosine biosynthesis protein QueC AKJ08_RS12520 PF00313 'Cold-shock' DNA-binding domain AKJ08_RS12525 PF01713 Smr domain AKJ08_RS12530 PF03301 Tryptophan 2,3-dioxygenase AKJ08_RS12550 PF01494 FAD binding domain AKJ08_RS12570 PF00561 alpha/beta hydrolase fold AKJ08_RS12575 PF00633 Helix-hairpin-helix motif AKJ08_RS12575 PF00730 HhH-GPD superfamily base excision DNA repair protein AKJ08_RS12575 PF14815 NUDIX domain AKJ08_RS12610 PF01047 MarR family AKJ08_RS12615 PF00005 ABC transporter AKJ08_RS12625 PF12704 MacB-like periplasmic core domain AKJ08_RS12625 PF02687 FtsX-like permease family AKJ08_RS12625 PF00005 ABC transporter AKJ08_RS12650 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS12650 PF13185 GAF domain AKJ08_RS12650 PF00158 Sigma-54 interaction domain AKJ08_RS12675 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS12680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AKJ08_RS12685 PF00106 short chain dehydrogenase AKJ08_RS12690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS12695 PF02581 Thiamine monophosphate synthase AKJ08_RS12695 PF08543 Phosphomethylpyrimidine kinase AKJ08_RS12710 PF01743 Poly A polymerase head domain AKJ08_RS12710 PF01368 DHH family AKJ08_RS12710 PF00571 CBS domain AKJ08_RS12710 PF12627 Probable RNA and SrmB- binding site of polymerase A AKJ08_RS12710 PF02272 DHHA1 domain AKJ08_RS12715 PF00571 CBS domain AKJ08_RS12715 PF01368 DHH family AKJ08_RS12715 PF02272 DHHA1 domain AKJ08_RS12715 PF01743 Poly A polymerase head domain AKJ08_RS12725 PF00085 Thioredoxin AKJ08_RS12730 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AKJ08_RS12730 PF00326 Prolyl oligopeptidase family AKJ08_RS12745 PF00719 Inorganic pyrophosphatase AKJ08_RS12775 PF00925 GTP cyclohydrolase II AKJ08_RS12785 PF13614 AAA domain AKJ08_RS12800 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS12800 PF00072 Response regulator receiver domain AKJ08_RS12805 PF00581 Rhodanese-like domain AKJ08_RS12810 PF02896 PEP-utilising enzyme, TIM barrel domain AKJ08_RS12810 PF00391 PEP-utilising enzyme, mobile domain AKJ08_RS12810 PF05524 PEP-utilising enzyme, N-terminal AKJ08_RS12815 PF00381 PTS HPr component phosphorylation site AKJ08_RS12820 PF03613 PTS system mannose/fructose/sorbose family IID component AKJ08_RS12825 PF03609 PTS system sorbose-specific iic component AKJ08_RS12830 PF03830 PTS system sorbose subfamily IIB component AKJ08_RS12835 PF03830 PTS system sorbose subfamily IIB component AKJ08_RS12835 PF03610 PTS system fructose IIA component AKJ08_RS12840 PF03668 P-loop ATPase protein family AKJ08_RS12845 PF02603 HPr Serine kinase N terminus AKJ08_RS12845 PF07475 HPr Serine kinase C-terminal domain AKJ08_RS12850 PF00072 Response regulator receiver domain AKJ08_RS12850 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS12855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AKJ08_RS12860 PF00309 Sigma-54 factor, Activator interacting domain (AID) AKJ08_RS12860 PF04963 Sigma-54 factor, core binding domain AKJ08_RS12860 PF04552 Sigma-54, DNA binding domain AKJ08_RS12865 PF00005 ABC transporter AKJ08_RS12880 PF03279 Bacterial lipid A biosynthesis acyltransferase AKJ08_RS12890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKJ08_RS12890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKJ08_RS12890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKJ08_RS12895 PF01370 NAD dependent epimerase/dehydratase family AKJ08_RS12900 PF02348 Cytidylyltransferase AKJ08_RS12905 PF02350 UDP-N-acetylglucosamine 2-epimerase AKJ08_RS12920 PF00501 AMP-binding enzyme AKJ08_RS12920 PF13193 AMP-binding enzyme C-terminal domain AKJ08_RS12925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS12925 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS12925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS12940 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS12945 PF01042 Endoribonuclease L-PSP AKJ08_RS12950 PF00106 short chain dehydrogenase AKJ08_RS12970 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS12970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS12970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS12990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AKJ08_RS12990 PF01926 50S ribosome-binding GTPase AKJ08_RS13000 PF03109 ABC1 family AKJ08_RS13005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AKJ08_RS13005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AKJ08_RS13005 PF02770 Acyl-CoA dehydrogenase, middle domain AKJ08_RS13030 PF01176 Translation initiation factor 1A / IF-1 AKJ08_RS13045 PF00156 Phosphoribosyl transferase domain AKJ08_RS13055 PF01676 Metalloenzyme superfamily AKJ08_RS13055 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AKJ08_RS13060 PF02590 Predicted SPOUT methyltransferase AKJ08_RS13070 PF16360 GTP-binding GTPase Middle Region AKJ08_RS13070 PF01926 50S ribosome-binding GTPase AKJ08_RS13070 PF13167 GTP-binding GTPase N-terminal AKJ08_RS13075 PF00561 alpha/beta hydrolase fold AKJ08_RS13080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AKJ08_RS13080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AKJ08_RS13105 PF06968 Biotin and Thiamin Synthesis associated domain AKJ08_RS13105 PF04055 Radical SAM superfamily AKJ08_RS13110 PF00106 short chain dehydrogenase AKJ08_RS13115 PF07681 DoxX AKJ08_RS13120 PF18073 Rubredoxin metal binding domain AKJ08_RS13135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AKJ08_RS13135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AKJ08_RS13140 PF12146 Serine aminopeptidase, S33 AKJ08_RS13160 PF07715 TonB-dependent Receptor Plug Domain AKJ08_RS13160 PF00593 TonB dependent receptor AKJ08_RS13175 PF01032 FecCD transport family AKJ08_RS13180 PF00211 Adenylate and Guanylate cyclase catalytic domain AKJ08_RS13185 PF00069 Protein kinase domain AKJ08_RS13185 PF08308 PEGA domain AKJ08_RS13195 PF00005 ABC transporter AKJ08_RS13200 PF03544 Gram-negative bacterial TonB protein C-terminal AKJ08_RS13210 PF02580 D-Tyr-tRNA(Tyr) deacylase AKJ08_RS13215 PF07687 Peptidase dimerisation domain AKJ08_RS13215 PF01546 Peptidase family M20/M25/M40 AKJ08_RS13220 PF04958 Arginine N-succinyltransferase beta subunit AKJ08_RS13240 PF00696 Amino acid kinase family AKJ08_RS13245 PF01118 Semialdehyde dehydrogenase, NAD binding domain AKJ08_RS13245 PF02774 Semialdehyde dehydrogenase, dimerisation domain AKJ08_RS13265 PF03190 Protein of unknown function, DUF255 AKJ08_RS13275 PF00158 Sigma-54 interaction domain AKJ08_RS13275 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS13275 PF00072 Response regulator receiver domain AKJ08_RS13280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AKJ08_RS13280 PF00205 Thiamine pyrophosphate enzyme, central domain AKJ08_RS13280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AKJ08_RS13290 PF07244 Surface antigen variable number repeat AKJ08_RS13290 PF17243 POTRA domain TamA domain 1 AKJ08_RS13290 PF01103 Surface antigen AKJ08_RS13300 PF05670 NFACT protein RNA binding domain AKJ08_RS13315 PF01618 MotA/TolQ/ExbB proton channel family AKJ08_RS13320 PF02472 Biopolymer transport protein ExbD/TolR AKJ08_RS13340 PF00480 ROK family AKJ08_RS13345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AKJ08_RS13345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AKJ08_RS13345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AKJ08_RS13345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AKJ08_RS13355 PF00873 AcrB/AcrD/AcrF family AKJ08_RS13370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS13370 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS13370 PF00989 PAS fold AKJ08_RS13370 PF11808 Phosphate regulon sensor protein PhoR AKJ08_RS13375 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS13375 PF00072 Response regulator receiver domain AKJ08_RS13380 PF01061 ABC-2 type transporter AKJ08_RS13385 PF13732 Domain of unknown function (DUF4162) AKJ08_RS13385 PF00005 ABC transporter AKJ08_RS13390 PF00072 Response regulator receiver domain AKJ08_RS13390 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS13390 PF00158 Sigma-54 interaction domain AKJ08_RS13420 PF12256 Insecticide toxin TcdB middle/N-terminal region AKJ08_RS13420 PF12255 Insecticide toxin TcdB middle/C-terminal region AKJ08_RS13420 PF03534 Salmonella virulence plasmid 65kDa B protein AKJ08_RS13445 PF13333 Integrase core domain AKJ08_RS13445 PF00665 Integrase core domain AKJ08_RS13445 PF13276 HTH-like domain AKJ08_RS13450 PF00483 Nucleotidyl transferase AKJ08_RS13450 PF01050 Mannose-6-phosphate isomerase AKJ08_RS13455 PF00293 NUDIX domain AKJ08_RS13460 PF02673 Bacitracin resistance protein BacA AKJ08_RS13465 PF05221 S-adenosyl-L-homocysteine hydrolase AKJ08_RS13465 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AKJ08_RS13475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AKJ08_RS13475 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS13475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AKJ08_RS13480 PF00108 Thiolase, N-terminal domain AKJ08_RS13480 PF02803 Thiolase, C-terminal domain AKJ08_RS13505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AKJ08_RS13505 PF01367 5'-3' exonuclease, C-terminal SAM fold AKJ08_RS13505 PF00476 DNA polymerase family A AKJ08_RS13505 PF01612 3'-5' exonuclease AKJ08_RS13510 PF02976 DNA mismatch repair enzyme MutH AKJ08_RS13540 PF00723 Glycosyl hydrolases family 15 AKJ08_RS13550 PF02705 K+ potassium transporter AKJ08_RS13555 PF00762 Ferrochelatase AKJ08_RS13565 PF07683 Cobalamin synthesis protein cobW C-terminal domain AKJ08_RS13565 PF02492 CobW/HypB/UreG, nucleotide-binding domain AKJ08_RS13570 PF02801 Beta-ketoacyl synthase, C-terminal domain AKJ08_RS13570 PF00109 Beta-ketoacyl synthase, N-terminal domain AKJ08_RS13575 PF04073 Aminoacyl-tRNA editing domain AKJ08_RS13580 PF00440 Bacterial regulatory proteins, tetR family AKJ08_RS13580 PF13977 BetI-type transcriptional repressor, C-terminal AKJ08_RS13585 PF03055 Retinal pigment epithelial membrane protein AKJ08_RS13590 PF01575 MaoC like domain AKJ08_RS13600 PF02861 Clp amino terminal domain, pathogenicity island component AKJ08_RS13600 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS13600 PF17871 AAA lid domain AKJ08_RS13600 PF10431 C-terminal, D2-small domain, of ClpB protein AKJ08_RS13600 PF07724 AAA domain (Cdc48 subfamily) AKJ08_RS13605 PF02617 ATP-dependent Clp protease adaptor protein ClpS AKJ08_RS13610 PF00571 CBS domain AKJ08_RS13610 PF03471 Transporter associated domain AKJ08_RS13610 PF01595 Cyclin M transmembrane N-terminal domain AKJ08_RS13635 PF00854 POT family AKJ08_RS13640 PF13368 Topoisomerase C-terminal repeat AKJ08_RS13640 PF01131 DNA topoisomerase AKJ08_RS13640 PF01751 Toprim domain AKJ08_RS13680 PF01584 CheW-like domain AKJ08_RS13690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AKJ08_RS13695 PF01627 Hpt domain AKJ08_RS13695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS13695 PF01584 CheW-like domain AKJ08_RS13695 PF00072 Response regulator receiver domain AKJ08_RS13700 PF00072 Response regulator receiver domain AKJ08_RS13700 PF01339 CheB methylesterase AKJ08_RS13705 PF01739 CheR methyltransferase, SAM binding domain AKJ08_RS13710 PF00072 Response regulator receiver domain AKJ08_RS13710 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS13720 PF07995 Glucose / Sorbosone dehydrogenase AKJ08_RS13730 PF12706 Beta-lactamase superfamily domain AKJ08_RS13740 PF13936 Helix-turn-helix domain AKJ08_RS13740 PF00665 Integrase core domain AKJ08_RS13755 PF16326 ABC transporter C-terminal domain AKJ08_RS13755 PF00005 ABC transporter AKJ08_RS13755 PF12848 ABC transporter AKJ08_RS13765 PF12146 Serine aminopeptidase, S33 AKJ08_RS13780 PF02163 Peptidase family M50 AKJ08_RS13790 PF00849 RNA pseudouridylate synthase AKJ08_RS13800 PF01061 ABC-2 type transporter AKJ08_RS13805 PF00005 ABC transporter AKJ08_RS13810 PF00285 Citrate synthase, C-terminal domain AKJ08_RS13815 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS13815 PF00989 PAS fold AKJ08_RS13815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS13815 PF11808 Phosphate regulon sensor protein PhoR AKJ08_RS13820 PF03253 Urea transporter AKJ08_RS13825 PF02492 CobW/HypB/UreG, nucleotide-binding domain AKJ08_RS13830 PF01730 UreF AKJ08_RS13835 PF02814 UreE urease accessory protein, N-terminal domain AKJ08_RS13835 PF05194 UreE urease accessory protein, C-terminal domain AKJ08_RS13840 PF00449 Urease alpha-subunit, N-terminal domain AKJ08_RS13840 PF01979 Amidohydrolase family AKJ08_RS13845 PF00699 Urease beta subunit AKJ08_RS13850 PF00547 Urease, gamma subunit AKJ08_RS13855 PF01774 UreD urease accessory protein AKJ08_RS13860 PF06912 Protein of unknown function (DUF1275) AKJ08_RS13895 PF04143 Sulphur transport AKJ08_RS13900 PF01925 Sulfite exporter TauE/SafE AKJ08_RS13905 PF04273 Putative phosphatase (DUF442) AKJ08_RS13905 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS13910 PF00158 Sigma-54 interaction domain AKJ08_RS13910 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS13910 PF00072 Response regulator receiver domain AKJ08_RS13915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AKJ08_RS13915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AKJ08_RS13960 PF03466 LysR substrate binding domain AKJ08_RS13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS13965 PF00578 AhpC/TSA family AKJ08_RS13970 PF02627 Carboxymuconolactone decarboxylase family AKJ08_RS13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS13980 PF03466 LysR substrate binding domain AKJ08_RS13985 PF03364 Polyketide cyclase / dehydrase and lipid transport AKJ08_RS13990 PF05368 NmrA-like family AKJ08_RS14010 PF01253 Translation initiation factor SUI1 AKJ08_RS14020 PF17853 GGDEF-like domain AKJ08_RS14020 PF12833 Helix-turn-helix domain AKJ08_RS14030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AKJ08_RS14030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AKJ08_RS14035 PF03009 Glycerophosphoryl diester phosphodiesterase family AKJ08_RS14065 PF03466 LysR substrate binding domain AKJ08_RS14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS14085 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AKJ08_RS14085 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AKJ08_RS14100 PF00873 AcrB/AcrD/AcrF family AKJ08_RS14105 PF00072 Response regulator receiver domain AKJ08_RS14105 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS14110 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS14110 PF00672 HAMP domain AKJ08_RS14115 PF02016 LD-carboxypeptidase N-terminal domain AKJ08_RS14115 PF17676 LD-carboxypeptidase C-terminal domain AKJ08_RS14120 PF00144 Beta-lactamase AKJ08_RS14125 PF08245 Mur ligase middle domain AKJ08_RS14125 PF02875 Mur ligase family, glutamate ligase domain AKJ08_RS14125 PF01225 Mur ligase family, catalytic domain AKJ08_RS14145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AKJ08_RS14145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AKJ08_RS14145 PF06827 Zinc finger found in FPG and IleRS AKJ08_RS14150 PF01230 HIT domain AKJ08_RS14155 PF07687 Peptidase dimerisation domain AKJ08_RS14155 PF01546 Peptidase family M20/M25/M40 AKJ08_RS14160 PF00171 Aldehyde dehydrogenase family AKJ08_RS14165 PF02127 Aminopeptidase I zinc metalloprotease (M18) AKJ08_RS14170 PF04379 ApaG domain AKJ08_RS14180 PF05221 S-adenosyl-L-homocysteine hydrolase AKJ08_RS14180 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AKJ08_RS14195 PF13333 Integrase core domain AKJ08_RS14195 PF13276 HTH-like domain AKJ08_RS14195 PF00665 Integrase core domain AKJ08_RS14215 PF04055 Radical SAM superfamily AKJ08_RS14225 PF08281 Sigma-70, region 4 AKJ08_RS14225 PF04542 Sigma-70 region 2 AKJ08_RS14230 PF02245 Methylpurine-DNA glycosylase (MPG) AKJ08_RS14240 PF03023 Lipid II flippase MurJ AKJ08_RS14245 PF01966 HD domain AKJ08_RS14255 PF00672 HAMP domain AKJ08_RS14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS14255 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS14260 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS14260 PF00072 Response regulator receiver domain AKJ08_RS14270 PF01053 Cys/Met metabolism PLP-dependent enzyme AKJ08_RS14275 PF01037 Lrp/AsnC ligand binding domain AKJ08_RS14290 PF01491 Frataxin-like domain AKJ08_RS14295 PF01040 UbiA prenyltransferase family AKJ08_RS14295 PF02628 Cytochrome oxidase assembly protein AKJ08_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS14300 PF03466 LysR substrate binding domain AKJ08_RS14305 PF02633 Creatinine amidohydrolase AKJ08_RS14315 PF00793 DAHP synthetase I family AKJ08_RS14320 PF06418 CTP synthase N-terminus AKJ08_RS14320 PF00117 Glutamine amidotransferase class-I AKJ08_RS14340 PF00248 Aldo/keto reductase family AKJ08_RS14355 PF03960 ArsC family AKJ08_RS14385 PF07690 Major Facilitator Superfamily AKJ08_RS14390 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS14390 PF00107 Zinc-binding dehydrogenase AKJ08_RS14405 PF07690 Major Facilitator Superfamily AKJ08_RS14445 PF04542 Sigma-70 region 2 AKJ08_RS14445 PF08281 Sigma-70, region 4 AKJ08_RS14460 PF00583 Acetyltransferase (GNAT) family AKJ08_RS14485 PF00107 Zinc-binding dehydrogenase AKJ08_RS14485 PF16884 N-terminal domain of oxidoreductase AKJ08_RS14490 PF00557 Metallopeptidase family M24 AKJ08_RS14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS14510 PF01494 FAD binding domain AKJ08_RS14525 PF02417 Chromate transporter AKJ08_RS14570 PF00171 Aldehyde dehydrogenase family AKJ08_RS14580 PF13673 Acetyltransferase (GNAT) domain AKJ08_RS14580 PF04229 GrpB protein AKJ08_RS14605 PF00664 ABC transporter transmembrane region AKJ08_RS14605 PF00005 ABC transporter AKJ08_RS14610 PF00664 ABC transporter transmembrane region AKJ08_RS14610 PF00005 ABC transporter AKJ08_RS14615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AKJ08_RS14650 PF12833 Helix-turn-helix domain AKJ08_RS14650 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AKJ08_RS14650 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AKJ08_RS14650 PF02805 Metal binding domain of Ada AKJ08_RS14660 PF00156 Phosphoribosyl transferase domain AKJ08_RS14670 PF05726 Pirin C-terminal cupin domain AKJ08_RS14670 PF02678 Pirin AKJ08_RS14675 PF01048 Phosphorylase superfamily AKJ08_RS14680 PF00561 alpha/beta hydrolase fold AKJ08_RS14700 PF03795 YCII-related domain AKJ08_RS14705 PF08274 PhnA Zinc-Ribbon AKJ08_RS14705 PF03831 PhnA domain AKJ08_RS14725 PF02678 Pirin AKJ08_RS14725 PF05726 Pirin C-terminal cupin domain AKJ08_RS14740 PF02678 Pirin AKJ08_RS14740 PF05726 Pirin C-terminal cupin domain AKJ08_RS14745 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS14750 PF01494 FAD binding domain AKJ08_RS14760 PF00171 Aldehyde dehydrogenase family AKJ08_RS14770 PF00206 Lyase AKJ08_RS14770 PF10415 Fumarase C C-terminus AKJ08_RS14775 PF00390 Malic enzyme, N-terminal domain AKJ08_RS14775 PF03949 Malic enzyme, NAD binding domain AKJ08_RS14785 PF03848 Tellurite resistance protein TehB AKJ08_RS14790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS14795 PF00271 Helicase conserved C-terminal domain AKJ08_RS14795 PF00176 SNF2 family N-terminal domain AKJ08_RS14795 PF12419 SNF2 Helicase protein AKJ08_RS14840 PF02773 S-adenosylmethionine synthetase, C-terminal domain AKJ08_RS14840 PF02772 S-adenosylmethionine synthetase, central domain AKJ08_RS14840 PF00438 S-adenosylmethionine synthetase, N-terminal domain AKJ08_RS14870 PF00271 Helicase conserved C-terminal domain AKJ08_RS14870 PF00176 SNF2 family N-terminal domain AKJ08_RS14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS14900 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS14900 PF00989 PAS fold AKJ08_RS14920 PF04542 Sigma-70 region 2 AKJ08_RS14920 PF12680 SnoaL-like domain AKJ08_RS14920 PF08281 Sigma-70, region 4 AKJ08_RS14925 PF07237 Protein of unknown function (DUF1428) AKJ08_RS14945 PF12680 SnoaL-like domain AKJ08_RS14945 PF08281 Sigma-70, region 4 AKJ08_RS14945 PF04542 Sigma-70 region 2 AKJ08_RS14960 PF14497 Glutathione S-transferase, C-terminal domain AKJ08_RS14960 PF02798 Glutathione S-transferase, N-terminal domain AKJ08_RS14975 PF01161 Phosphatidylethanolamine-binding protein AKJ08_RS14980 PF00665 Integrase core domain AKJ08_RS14980 PF13936 Helix-turn-helix domain AKJ08_RS15010 PF00144 Beta-lactamase AKJ08_RS15020 PF00005 ABC transporter AKJ08_RS15020 PF17755 UvrA DNA-binding domain AKJ08_RS15020 PF17760 UvrA interaction domain AKJ08_RS15085 PF01638 HxlR-like helix-turn-helix AKJ08_RS15090 PF02798 Glutathione S-transferase, N-terminal domain AKJ08_RS15095 PF17922 Tetracyclin repressor-like, C-terminal domain AKJ08_RS15095 PF00440 Bacterial regulatory proteins, tetR family AKJ08_RS15110 PF07730 Histidine kinase AKJ08_RS15115 PF00072 Response regulator receiver domain AKJ08_RS15115 PF00196 Bacterial regulatory proteins, luxR family AKJ08_RS15140 PF17954 Quercetinase C-terminal cupin domain AKJ08_RS15140 PF02678 Pirin AKJ08_RS15145 PF03466 LysR substrate binding domain AKJ08_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS15155 PF12706 Beta-lactamase superfamily domain AKJ08_RS15160 PF00440 Bacterial regulatory proteins, tetR family AKJ08_RS15160 PF08361 MAATS-type transcriptional repressor, C-terminal region AKJ08_RS15170 PF01451 Low molecular weight phosphotyrosine protein phosphatase AKJ08_RS15175 PF01758 Sodium Bile acid symporter family AKJ08_RS15185 PF08448 PAS fold AKJ08_RS15185 PF03705 CheR methyltransferase, all-alpha domain AKJ08_RS15185 PF01739 CheR methyltransferase, SAM binding domain AKJ08_RS15185 PF01339 CheB methylesterase AKJ08_RS15190 PF03358 NADPH-dependent FMN reductase AKJ08_RS15195 PF02678 Pirin AKJ08_RS15195 PF17954 Quercetinase C-terminal cupin domain AKJ08_RS15200 PF03466 LysR substrate binding domain AKJ08_RS15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS15205 PF00005 ABC transporter AKJ08_RS15205 PF12848 ABC transporter AKJ08_RS15230 PF00561 alpha/beta hydrolase fold AKJ08_RS15240 PF01544 CorA-like Mg2+ transporter protein AKJ08_RS15250 PF03352 Methyladenine glycosylase AKJ08_RS15255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AKJ08_RS15280 PF00155 Aminotransferase class I and II AKJ08_RS15285 PF08241 Methyltransferase domain AKJ08_RS15290 PF02661 Fic/DOC family AKJ08_RS15290 PF13784 Fic/DOC family N-terminal AKJ08_RS15305 PF00270 DEAD/DEAH box helicase AKJ08_RS15305 PF17191 RecG wedge domain AKJ08_RS15305 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AKJ08_RS15340 PF05724 Thiopurine S-methyltransferase (TPMT) AKJ08_RS15370 PF01022 Bacterial regulatory protein, arsR family AKJ08_RS15375 PF01022 Bacterial regulatory protein, arsR family AKJ08_RS15390 PF02626 Carboxyltransferase domain, subdomain A and B AKJ08_RS15395 PF00561 alpha/beta hydrolase fold AKJ08_RS15400 PF00561 alpha/beta hydrolase fold AKJ08_RS15420 PF01494 FAD binding domain AKJ08_RS15500 PF14489 QueF-like protein AKJ08_RS15510 PF00749 tRNA synthetases class I (E and Q), catalytic domain AKJ08_RS15520 PF00378 Enoyl-CoA hydratase/isomerase AKJ08_RS15525 PF13660 Domain of unknown function (DUF4147) AKJ08_RS15525 PF05161 MOFRL family AKJ08_RS15530 PF00551 Formyl transferase AKJ08_RS15530 PF02911 Formyl transferase, C-terminal domain AKJ08_RS15535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AKJ08_RS15540 PF01488 Shikimate / quinate 5-dehydrogenase AKJ08_RS15540 PF08501 Shikimate dehydrogenase substrate binding domain AKJ08_RS15540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AKJ08_RS15545 PF01264 Chorismate synthase AKJ08_RS15550 PF01761 3-dehydroquinate synthase AKJ08_RS15555 PF01220 Dehydroquinase class II AKJ08_RS15560 PF03741 Integral membrane protein TerC family AKJ08_RS15565 PF01189 16S rRNA methyltransferase RsmB/F AKJ08_RS15565 PF01029 NusB family AKJ08_RS15570 PF05726 Pirin C-terminal cupin domain AKJ08_RS15570 PF02678 Pirin AKJ08_RS15575 PF00834 Ribulose-phosphate 3 epimerase family AKJ08_RS15580 PF00072 Response regulator receiver domain AKJ08_RS15580 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS15600 PF00919 Uncharacterized protein family UPF0004 AKJ08_RS15600 PF04055 Radical SAM superfamily AKJ08_RS15610 PF04241 Protein of unknown function (DUF423) AKJ08_RS15625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AKJ08_RS15630 PF01106 NifU-like domain AKJ08_RS15640 PF03144 Elongation factor Tu domain 2 AKJ08_RS15640 PF16658 Class II release factor RF3, C-terminal domain AKJ08_RS15640 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS15650 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS15650 PF00989 PAS fold AKJ08_RS15650 PF16736 Single Cache-like AKJ08_RS15660 PF00510 Cytochrome c oxidase subunit III AKJ08_RS15665 PF00115 Cytochrome C and Quinol oxidase polypeptide I AKJ08_RS15670 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AKJ08_RS15705 PF13247 4Fe-4S dicluster domain AKJ08_RS15705 PF00037 4Fe-4S binding domain AKJ08_RS15720 PF08482 ATP-dependent helicase C-terminal AKJ08_RS15720 PF00270 DEAD/DEAH box helicase AKJ08_RS15720 PF00271 Helicase conserved C-terminal domain AKJ08_RS15720 PF04408 Helicase associated domain (HA2) AKJ08_RS15730 PF10672 S-adenosylmethionine-dependent methyltransferase AKJ08_RS15740 PF01628 HrcA protein C terminal domain AKJ08_RS15740 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AKJ08_RS15745 PF13520 Amino acid permease AKJ08_RS15750 PF02222 ATP-grasp domain AKJ08_RS15750 PF01370 NAD dependent epimerase/dehydratase family AKJ08_RS15760 PF01925 Sulfite exporter TauE/SafE AKJ08_RS15765 PF01790 Prolipoprotein diacylglyceryl transferase AKJ08_RS15770 PF01252 Signal peptidase (SPase) II AKJ08_RS15775 PF00133 tRNA synthetases class I (I, L, M and V) AKJ08_RS15775 PF06827 Zinc finger found in FPG and IleRS AKJ08_RS15775 PF08264 Anticodon-binding domain of tRNA AKJ08_RS15780 PF08443 RimK-like ATP-grasp domain AKJ08_RS15780 PF02080 TrkA-C domain AKJ08_RS15780 PF18030 RimK PreATP-grasp domain AKJ08_RS15795 PF02754 Cysteine-rich domain AKJ08_RS15795 PF13183 4Fe-4S dicluster domain AKJ08_RS15805 PF00107 Zinc-binding dehydrogenase AKJ08_RS15805 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS15835 PF01751 Toprim domain AKJ08_RS15835 PF00204 DNA gyrase B AKJ08_RS15835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS15835 PF00986 DNA gyrase B subunit, carboxyl terminus AKJ08_RS15840 PF02463 RecF/RecN/SMC N terminal domain AKJ08_RS15845 PF02768 DNA polymerase III beta subunit, C-terminal domain AKJ08_RS15845 PF02767 DNA polymerase III beta subunit, central domain AKJ08_RS15845 PF00712 DNA polymerase III beta subunit, N-terminal domain AKJ08_RS15850 PF08299 Bacterial dnaA protein helix-turn-helix AKJ08_RS15850 PF00308 Bacterial dnaA protein AKJ08_RS15850 PF11638 DnaA N-terminal domain AKJ08_RS15855 PF00468 Ribosomal protein L34 AKJ08_RS15860 PF00825 Ribonuclease P AKJ08_RS15865 PF01809 Putative membrane protein insertion efficiency factor AKJ08_RS15870 PF02096 60Kd inner membrane protein AKJ08_RS15870 PF14849 YidC periplasmic domain AKJ08_RS15885 PF00107 Zinc-binding dehydrogenase AKJ08_RS15885 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS15890 PF00756 Putative esterase AKJ08_RS15895 PF03960 ArsC family AKJ08_RS15905 PF01609 Transposase DDE domain AKJ08_RS15910 PF00795 Carbon-nitrogen hydrolase AKJ08_RS15915 PF02527 rRNA small subunit methyltransferase G AKJ08_RS15920 PF13614 AAA domain AKJ08_RS15925 PF02195 ParB-like nuclease domain AKJ08_RS15925 PF17762 HTH domain found in ParB protein AKJ08_RS15935 PF00213 ATP synthase delta (OSCP) subunit AKJ08_RS15940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKJ08_RS15940 PF00306 ATP synthase alpha/beta chain, C terminal domain AKJ08_RS15940 PF02874 ATP synthase alpha/beta family, beta-barrel domain AKJ08_RS15945 PF00231 ATP synthase AKJ08_RS15950 PF02874 ATP synthase alpha/beta family, beta-barrel domain AKJ08_RS15950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKJ08_RS15955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AKJ08_RS15955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AKJ08_RS15970 PF01979 Amidohydrolase family AKJ08_RS15975 PF14765 Polyketide synthase dehydratase AKJ08_RS15975 PF08990 Erythronolide synthase docking AKJ08_RS15975 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS15975 PF16197 Ketoacyl-synthetase C-terminal extension AKJ08_RS15975 PF00698 Acyl transferase domain AKJ08_RS15975 PF00109 Beta-ketoacyl synthase, N-terminal domain AKJ08_RS15975 PF02801 Beta-ketoacyl synthase, C-terminal domain AKJ08_RS15975 PF08659 KR domain AKJ08_RS15975 PF00550 Phosphopantetheine attachment site AKJ08_RS15995 PF00817 impB/mucB/samB family AKJ08_RS15995 PF11799 impB/mucB/samB family C-terminal domain AKJ08_RS16000 PF07992 Pyridine nucleotide-disulphide oxidoreductase AKJ08_RS16000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AKJ08_RS16005 PF00255 Glutathione peroxidase AKJ08_RS16015 PF00202 Aminotransferase class-III AKJ08_RS16030 PF00209 Sodium:neurotransmitter symporter family AKJ08_RS16035 PF01268 Formate--tetrahydrofolate ligase AKJ08_RS16040 PF03601 Conserved hypothetical protein 698 AKJ08_RS16050 PF00571 CBS domain AKJ08_RS16055 PF02627 Carboxymuconolactone decarboxylase family AKJ08_RS16060 PF00085 Thioredoxin AKJ08_RS16065 PF04264 YceI-like domain AKJ08_RS16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AKJ08_RS16070 PF03466 LysR substrate binding domain AKJ08_RS16080 PF00106 short chain dehydrogenase AKJ08_RS16085 PF00999 Sodium/hydrogen exchanger family AKJ08_RS16090 PF05154 TM2 domain AKJ08_RS16105 PF04011 LemA family AKJ08_RS16115 PF10459 Peptidase S46 AKJ08_RS16125 PF00072 Response regulator receiver domain AKJ08_RS16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS16130 PF00672 HAMP domain AKJ08_RS16130 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS16130 PF13426 PAS domain AKJ08_RS16165 PF00543 Nitrogen regulatory protein P-II AKJ08_RS16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS16170 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS16170 PF00989 PAS fold AKJ08_RS16175 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS16175 PF00072 Response regulator receiver domain AKJ08_RS16175 PF00158 Sigma-54 interaction domain AKJ08_RS16190 PF00119 ATP synthase A chain AKJ08_RS16195 PF00137 ATP synthase subunit C AKJ08_RS16200 PF00430 ATP synthase B/B' CF(0) AKJ08_RS16205 PF06071 Protein of unknown function (DUF933) AKJ08_RS16205 PF01926 50S ribosome-binding GTPase AKJ08_RS16215 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AKJ08_RS16220 PF00639 PPIC-type PPIASE domain AKJ08_RS16220 PF09312 SurA N-terminal domain AKJ08_RS16225 PF09312 SurA N-terminal domain AKJ08_RS16225 PF00639 PPIC-type PPIASE domain AKJ08_RS16230 PF05698 Bacterial trigger factor protein (TF) C-terminus AKJ08_RS16235 PF01432 Peptidase family M3 AKJ08_RS16255 PF01327 Polypeptide deformylase AKJ08_RS16265 PF00132 Bacterial transferase hexapeptide (six repeats) AKJ08_RS16270 PF00291 Pyridoxal-phosphate dependent enzyme AKJ08_RS16310 PF00892 EamA-like transporter family AKJ08_RS16315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AKJ08_RS16340 PF17757 UvrB interaction domain AKJ08_RS16340 PF03461 TRCF domain AKJ08_RS16340 PF00271 Helicase conserved C-terminal domain AKJ08_RS16340 PF02559 CarD-like/TRCF domain AKJ08_RS16340 PF00270 DEAD/DEAH box helicase AKJ08_RS16345 PF01025 GrpE AKJ08_RS16350 PF00012 Hsp70 protein AKJ08_RS16355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AKJ08_RS16360 PF00226 DnaJ domain AKJ08_RS16360 PF00684 DnaJ central domain AKJ08_RS16360 PF01556 DnaJ C terminal domain AKJ08_RS16390 PF12255 Insecticide toxin TcdB middle/C-terminal region AKJ08_RS16390 PF12256 Insecticide toxin TcdB middle/N-terminal region AKJ08_RS16390 PF03534 Salmonella virulence plasmid 65kDa B protein AKJ08_RS16400 PF14431 YwqJ-like deaminase AKJ08_RS16400 PF18807 Tripartite Tc toxins repeat AKJ08_RS16410 PF00012 Hsp70 protein AKJ08_RS16415 PF01494 FAD binding domain AKJ08_RS16435 PF06736 Protein of unknown function (DUF1211) AKJ08_RS16440 PF00248 Aldo/keto reductase family AKJ08_RS16445 PF06736 Protein of unknown function (DUF1211) AKJ08_RS16450 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS16450 PF00107 Zinc-binding dehydrogenase AKJ08_RS16455 PF02678 Pirin AKJ08_RS16455 PF05726 Pirin C-terminal cupin domain AKJ08_RS16465 PF01152 Bacterial-like globin AKJ08_RS16480 PF00115 Cytochrome C and Quinol oxidase polypeptide I AKJ08_RS16490 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AKJ08_RS16490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AKJ08_RS16495 PF12801 4Fe-4S binding domain AKJ08_RS16495 PF13746 4Fe-4S dicluster domain AKJ08_RS16495 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AKJ08_RS16500 PF06969 HemN C-terminal domain AKJ08_RS16500 PF04055 Radical SAM superfamily AKJ08_RS16515 PF07196 Flagellin hook IN motif AKJ08_RS16515 PF07195 Flagellar hook-associated protein 2 C-terminus AKJ08_RS16515 PF02465 Flagellar hook-associated protein 2 N-terminus AKJ08_RS16520 PF00669 Bacterial flagellin N-terminal helical region AKJ08_RS16520 PF00700 Bacterial flagellin C-terminal helical region AKJ08_RS16550 PF08525 Opacity-associated protein A N-terminal motif AKJ08_RS16550 PF01551 Peptidase family M23 AKJ08_RS16550 PF01476 LysM domain AKJ08_RS16555 PF02119 Flagellar P-ring protein AKJ08_RS16560 PF02107 Flagellar L-ring protein AKJ08_RS16570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AKJ08_RS16570 PF00460 Flagella basal body rod protein AKJ08_RS16575 PF00460 Flagella basal body rod protein AKJ08_RS16575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AKJ08_RS16585 PF04542 Sigma-70 region 2 AKJ08_RS16585 PF04539 Sigma-70 region 3 AKJ08_RS16585 PF04545 Sigma-70, region 4 AKJ08_RS16590 PF10609 NUBPL iron-transfer P-loop NTPase AKJ08_RS16595 PF00448 SRP54-type protein, GTPase domain AKJ08_RS16600 PF00771 FHIPEP family AKJ08_RS16605 PF01312 FlhB HrpN YscU SpaS Family AKJ08_RS16610 PF01311 Bacterial export proteins, family 1 AKJ08_RS16615 PF01313 Bacterial export proteins, family 3 AKJ08_RS16620 PF00813 FliP family AKJ08_RS16630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AKJ08_RS16635 PF02154 Flagellar motor switch protein FliM AKJ08_RS16635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AKJ08_RS16645 PF00691 OmpA family AKJ08_RS16645 PF13677 Membrane MotB of proton-channel complex MotA/MotB AKJ08_RS16650 PF01618 MotA/TolQ/ExbB proton channel family AKJ08_RS16660 PF07559 Flagellar basal body protein FlaE AKJ08_RS16660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AKJ08_RS16660 PF00460 Flagella basal body rod protein AKJ08_RS16665 PF03963 Flagellar hook capping protein - N-terminal region AKJ08_RS16680 PF18269 T3SS EscN ATPase C-terminal domain AKJ08_RS16680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AKJ08_RS16690 PF01706 FliG C-terminal domain AKJ08_RS16690 PF14841 FliG middle domain AKJ08_RS16690 PF14842 FliG N-terminal domain AKJ08_RS16695 PF01514 Secretory protein of YscJ/FliF family AKJ08_RS16695 PF08345 Flagellar M-ring protein C-terminal AKJ08_RS16700 PF02049 Flagellar hook-basal body complex protein FliE AKJ08_RS16705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AKJ08_RS16705 PF00460 Flagella basal body rod protein AKJ08_RS16710 PF00460 Flagella basal body rod protein AKJ08_RS16720 PF00158 Sigma-54 interaction domain AKJ08_RS16720 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS16720 PF06490 Flagellar regulatory protein FleQ AKJ08_RS16725 PF13426 PAS domain AKJ08_RS16725 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS16725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS16725 PF00672 HAMP domain AKJ08_RS16730 PF07690 Major Facilitator Superfamily AKJ08_RS16750 PF06733 DEAD_2 AKJ08_RS16750 PF13307 Helicase C-terminal domain AKJ08_RS16760 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS16760 PF05362 Lon protease (S16) C-terminal proteolytic domain AKJ08_RS16760 PF02190 ATP-dependent protease La (LON) substrate-binding domain AKJ08_RS16765 PF00025 ADP-ribosylation factor family AKJ08_RS16770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AKJ08_RS16770 PF01627 Hpt domain AKJ08_RS16770 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS16770 PF00672 HAMP domain AKJ08_RS16770 PF00072 Response regulator receiver domain AKJ08_RS16775 PF00586 AIR synthase related protein, N-terminal domain AKJ08_RS16775 PF02769 AIR synthase related protein, C-terminal domain AKJ08_RS16780 PF00672 HAMP domain AKJ08_RS16780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AKJ08_RS16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS16790 PF01627 Hpt domain AKJ08_RS16790 PF02895 Signal transducing histidine kinase, homodimeric domain AKJ08_RS16790 PF01584 CheW-like domain AKJ08_RS16790 PF07194 P2 response regulator binding domain AKJ08_RS16795 PF00731 AIR carboxylase AKJ08_RS16800 PF01969 Protein of unknown function DUF111 AKJ08_RS16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS16805 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS16805 PF13426 PAS domain AKJ08_RS16805 PF08448 PAS fold AKJ08_RS16805 PF00072 Response regulator receiver domain AKJ08_RS16830 PF03030 Inorganic H+ pyrophosphatase AKJ08_RS16845 PF01557 Fumarylacetoacetate (FAA) hydrolase family AKJ08_RS16850 PF02798 Glutathione S-transferase, N-terminal domain AKJ08_RS16850 PF14497 Glutathione S-transferase, C-terminal domain AKJ08_RS16855 PF04209 homogentisate 1,2-dioxygenase AKJ08_RS16860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AKJ08_RS16875 PF01139 tRNA-splicing ligase RtcB AKJ08_RS16885 PF00970 Oxidoreductase FAD-binding domain AKJ08_RS16885 PF00111 2Fe-2S iron-sulfur cluster binding domain AKJ08_RS16885 PF00175 Oxidoreductase NAD-binding domain AKJ08_RS16915 PF03951 Glutamine synthetase, beta-Grasp domain AKJ08_RS16915 PF00120 Glutamine synthetase, catalytic domain AKJ08_RS16930 PF00005 ABC transporter AKJ08_RS16935 PF00005 ABC transporter AKJ08_RS16935 PF12399 Branched-chain amino acid ATP-binding cassette transporter AKJ08_RS16940 PF02653 Branched-chain amino acid transport system / permease component AKJ08_RS16940 PF11862 Domain of unknown function (DUF3382) AKJ08_RS16945 PF02653 Branched-chain amino acid transport system / permease component AKJ08_RS16950 PF13458 Periplasmic binding protein AKJ08_RS16955 PF00072 Response regulator receiver domain AKJ08_RS16955 PF00486 Transcriptional regulatory protein, C terminal AKJ08_RS16960 PF01915 Glycosyl hydrolase family 3 C-terminal domain AKJ08_RS16960 PF00933 Glycosyl hydrolase family 3 N terminal domain AKJ08_RS16965 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS16965 PF18698 Histidine kinase sensor domain AKJ08_RS16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS16965 PF00672 HAMP domain AKJ08_RS16965 PF00989 PAS fold AKJ08_RS16980 PF17863 AAA lid domain AKJ08_RS16980 PF07726 ATPase family associated with various cellular activities (AAA) AKJ08_RS16995 PF04542 Sigma-70 region 2 AKJ08_RS16995 PF08281 Sigma-70, region 4 AKJ08_RS17030 PF13614 AAA domain AKJ08_RS17030 PF13807 G-rich domain on putative tyrosine kinase AKJ08_RS17030 PF02706 Chain length determinant protein AKJ08_RS17035 PF00953 Glycosyl transferase family 4 AKJ08_RS17040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AKJ08_RS17040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AKJ08_RS17050 PF13579 Glycosyl transferase 4-like domain AKJ08_RS17050 PF00534 Glycosyl transferases group 1 AKJ08_RS17070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AKJ08_RS17070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AKJ08_RS17070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AKJ08_RS17075 PF02350 UDP-N-acetylglucosamine 2-epimerase AKJ08_RS17145 PF07690 Major Facilitator Superfamily AKJ08_RS17155 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS17155 PF00360 Phytochrome region AKJ08_RS17155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS17155 PF01590 GAF domain AKJ08_RS17155 PF08446 PAS fold AKJ08_RS17160 PF01739 CheR methyltransferase, SAM binding domain AKJ08_RS17160 PF03705 CheR methyltransferase, all-alpha domain AKJ08_RS17165 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS17165 PF01627 Hpt domain AKJ08_RS17165 PF00672 HAMP domain AKJ08_RS17165 PF00072 Response regulator receiver domain AKJ08_RS17165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AKJ08_RS17185 PF01925 Sulfite exporter TauE/SafE AKJ08_RS17195 PF00583 Acetyltransferase (GNAT) family AKJ08_RS17200 PF00149 Calcineurin-like phosphoesterase AKJ08_RS17200 PF12320 Type 5 capsule protein repressor C-terminal domain AKJ08_RS17210 PF00248 Aldo/keto reductase family AKJ08_RS17215 PF18029 Glyoxalase-like domain AKJ08_RS17215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AKJ08_RS17230 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS17230 PF00672 HAMP domain AKJ08_RS17230 PF13426 PAS domain AKJ08_RS17230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS17235 PF00072 Response regulator receiver domain AKJ08_RS17235 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS17235 PF00158 Sigma-54 interaction domain AKJ08_RS17240 PF00873 AcrB/AcrD/AcrF family AKJ08_RS17260 PF13536 Putative multidrug resistance efflux transporter AKJ08_RS17270 PF00873 AcrB/AcrD/AcrF family AKJ08_RS17290 PF00296 Luciferase-like monooxygenase AKJ08_RS17295 PF00472 RF-1 domain AKJ08_RS17315 PF12680 SnoaL-like domain AKJ08_RS17315 PF04542 Sigma-70 region 2 AKJ08_RS17315 PF08281 Sigma-70, region 4 AKJ08_RS17325 PF00034 Cytochrome c AKJ08_RS17325 PF03150 Di-haem cytochrome c peroxidase AKJ08_RS17330 PF04055 Radical SAM superfamily AKJ08_RS17385 PF01661 Macro domain AKJ08_RS17395 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS17400 PF07883 Cupin domain AKJ08_RS17405 PF13823 Alcohol dehydrogenase GroES-associated AKJ08_RS17405 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS17405 PF00107 Zinc-binding dehydrogenase AKJ08_RS17410 PF01625 Peptide methionine sulfoxide reductase AKJ08_RS17415 PF00271 Helicase conserved C-terminal domain AKJ08_RS17415 PF08148 DSHCT (NUC185) domain AKJ08_RS17415 PF00270 DEAD/DEAH box helicase AKJ08_RS17425 PF05195 Aminopeptidase P, N-terminal domain AKJ08_RS17425 PF00557 Metallopeptidase family M24 AKJ08_RS17435 PF00154 recA bacterial DNA recombination protein AKJ08_RS17445 PF00202 Aminotransferase class-III AKJ08_RS17465 PF00563 EAL domain AKJ08_RS17465 PF00990 Diguanylate cyclase, GGDEF domain AKJ08_RS17465 PF03707 Bacterial signalling protein N terminal repeat AKJ08_RS17475 PF00521 DNA gyrase/topoisomerase IV, subunit A AKJ08_RS17475 PF03989 DNA gyrase C-terminal domain, beta-propeller AKJ08_RS17485 PF02321 Outer membrane efflux protein AKJ08_RS17490 PF00873 AcrB/AcrD/AcrF family AKJ08_RS17495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AKJ08_RS17495 PF00529 HlyD membrane-fusion protein of T1SS AKJ08_RS17500 PF16859 Tetracyclin repressor-like, C-terminal domain AKJ08_RS17500 PF00440 Bacterial regulatory proteins, tetR family AKJ08_RS17525 PF00245 Alkaline phosphatase AKJ08_RS17530 PF00245 Alkaline phosphatase AKJ08_RS17545 PF07690 Major Facilitator Superfamily AKJ08_RS17595 PF13532 2OG-Fe(II) oxygenase superfamily AKJ08_RS17605 PF02678 Pirin AKJ08_RS17605 PF05726 Pirin C-terminal cupin domain AKJ08_RS17610 PF00583 Acetyltransferase (GNAT) family AKJ08_RS17650 PF00501 AMP-binding enzyme AKJ08_RS17650 PF13193 AMP-binding enzyme C-terminal domain AKJ08_RS17660 PF01370 NAD dependent epimerase/dehydratase family AKJ08_RS17665 PF00326 Prolyl oligopeptidase family AKJ08_RS17665 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AKJ08_RS17670 PF00326 Prolyl oligopeptidase family AKJ08_RS17670 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AKJ08_RS17690 PF18337 RapA N-terminal Tudor like domain AKJ08_RS17690 PF18339 RapA N-terminal Tudor like domain 1 AKJ08_RS17690 PF00176 SNF2 family N-terminal domain AKJ08_RS17690 PF12137 RNA polymerase recycling family C-terminal AKJ08_RS17690 PF00271 Helicase conserved C-terminal domain AKJ08_RS17715 PF00730 HhH-GPD superfamily base excision DNA repair protein AKJ08_RS17715 PF06029 AlkA N-terminal domain AKJ08_RS17715 PF02805 Metal binding domain of Ada AKJ08_RS17715 PF12833 Helix-turn-helix domain AKJ08_RS17720 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AKJ08_RS17720 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AKJ08_RS17725 PF00375 Sodium:dicarboxylate symporter family AKJ08_RS17730 PF00491 Arginase family AKJ08_RS17735 PF01979 Amidohydrolase family AKJ08_RS17740 PF01170 Putative RNA methylase family UPF0020 AKJ08_RS17740 PF02926 THUMP domain AKJ08_RS17745 PF10017 Histidine-specific methyltransferase, SAM-dependent AKJ08_RS17750 PF13230 Glutamine amidotransferases class-II AKJ08_RS17755 PF12867 DinB superfamily AKJ08_RS17755 PF03781 Sulfatase-modifying factor enzyme 1 AKJ08_RS17800 PF05199 GMC oxidoreductase AKJ08_RS17800 PF00732 GMC oxidoreductase AKJ08_RS17805 PF08240 Alcohol dehydrogenase GroES-like domain AKJ08_RS17805 PF00107 Zinc-binding dehydrogenase AKJ08_RS17815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AKJ08_RS17815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AKJ08_RS17820 PF10672 S-adenosylmethionine-dependent methyltransferase AKJ08_RS17820 PF02926 THUMP domain AKJ08_RS17820 PF01170 Putative RNA methylase family UPF0020 AKJ08_RS17825 PF00582 Universal stress protein family AKJ08_RS17835 PF10011 Predicted membrane protein (DUF2254) AKJ08_RS17840 PF00154 recA bacterial DNA recombination protein AKJ08_RS17850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AKJ08_RS17850 PF14579 Helix-hairpin-helix motif AKJ08_RS17850 PF02811 PHP domain AKJ08_RS17850 PF07733 Bacterial DNA polymerase III alpha NTPase domain AKJ08_RS17855 PF13936 Helix-turn-helix domain AKJ08_RS17855 PF00665 Integrase core domain AKJ08_RS17875 PF07690 Major Facilitator Superfamily AKJ08_RS17885 PF01979 Amidohydrolase family AKJ08_RS17900 PF02190 ATP-dependent protease La (LON) substrate-binding domain AKJ08_RS17900 PF05362 Lon protease (S16) C-terminal proteolytic domain AKJ08_RS17900 PF00004 ATPase family associated with various cellular activities (AAA) AKJ08_RS17905 PF07690 Major Facilitator Superfamily AKJ08_RS17910 PF02798 Glutathione S-transferase, N-terminal domain AKJ08_RS17910 PF00043 Glutathione S-transferase, C-terminal domain AKJ08_RS17915 PF00005 ABC transporter AKJ08_RS17915 PF12848 ABC transporter AKJ08_RS17920 PF00679 Elongation factor G C-terminus AKJ08_RS17920 PF14492 Elongation Factor G, domain II AKJ08_RS17920 PF03764 Elongation factor G, domain IV AKJ08_RS17920 PF00009 Elongation factor Tu GTP binding domain AKJ08_RS17920 PF03144 Elongation factor Tu domain 2 AKJ08_RS17925 PF01722 BolA-like protein AKJ08_RS17930 PF00462 Glutaredoxin AKJ08_RS17935 PF00570 HRDC domain AKJ08_RS17935 PF01612 3'-5' exonuclease AKJ08_RS17940 PF13180 PDZ domain AKJ08_RS17950 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AKJ08_RS17955 PF02641 Uncharacterized ACR, COG1993 AKJ08_RS17960 PF02446 4-alpha-glucanotransferase AKJ08_RS17965 PF00128 Alpha amylase, catalytic domain AKJ08_RS17965 PF16657 Maltogenic Amylase, C-terminal domain AKJ08_RS17980 PF00158 Sigma-54 interaction domain AKJ08_RS17980 PF00072 Response regulator receiver domain AKJ08_RS17980 PF02954 Bacterial regulatory protein, Fis family AKJ08_RS17985 PF13426 PAS domain AKJ08_RS17985 PF00072 Response regulator receiver domain AKJ08_RS17985 PF08448 PAS fold AKJ08_RS17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS17985 PF00512 His Kinase A (phospho-acceptor) domain AKJ08_RS17995 PF03239 Iron permease FTR1 family AKJ08_RS18030 PF16916 Dimerisation domain of Zinc Transporter AKJ08_RS18030 PF01545 Cation efflux family AKJ08_RS18040 PF00478 IMP dehydrogenase / GMP reductase domain AKJ08_RS18040 PF00571 CBS domain AKJ08_RS18045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AKJ08_RS18085 PF17854 FtsK alpha domain AKJ08_RS18085 PF09397 Ftsk gamma domain AKJ08_RS18085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AKJ08_RS18085 PF01580 FtsK/SpoIIIE family AKJ08_RS18100 PF02686 Glu-tRNAGln amidotransferase C subunit AKJ08_RS18105 PF01425 Amidase AKJ08_RS18110 PF02934 GatB/GatE catalytic domain AKJ08_RS18110 PF02637 GatB domain AKJ08_RS18130 PF00829 Ribosomal prokaryotic L21 protein AKJ08_RS18135 PF01016 Ribosomal L27 protein AKJ08_RS18140 PF01018 GTP1/OBG AKJ08_RS18140 PF01926 50S ribosome-binding GTPase AKJ08_RS18155 PF00459 Inositol monophosphatase family AKJ08_RS18160 PF00919 Uncharacterized protein family UPF0004 AKJ08_RS18160 PF18693 TRAM domain AKJ08_RS18160 PF04055 Radical SAM superfamily AKJ08_RS18165 PF04461 Protein of unknown function (DUF520) AKJ08_RS18170 PF00753 Metallo-beta-lactamase superfamily AKJ08_RS18170 PF17770 Ribonuclease J C-terminal domain AKJ08_RS18170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AKJ08_RS18200 PF01835 MG2 domain AKJ08_RS18200 PF07703 Alpha-2-macroglobulin bait region domain AKJ08_RS18200 PF00207 Alpha-2-macroglobulin family AKJ08_RS18200 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain