AKJ08_RS00005	SM00845	GatB domain
AKJ08_RS00050	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS00060	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS00075	SM01359	AKJ08_RS00075
AKJ08_RS00080	SM01360	AKJ08_RS00080
AKJ08_RS00095	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS00115	SM00240	Forkhead associated domain
AKJ08_RS00115	SM00267	diguanylate cyclase
AKJ08_RS00130	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS00130	SM01091	Transporter associated domain
AKJ08_RS00145	SM01211	AKJ08_RS00145
AKJ08_RS00210	SM00736	Dystroglycan-type cadherin-like domains.
AKJ08_RS00235	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AKJ08_RS00270	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS00270	SM00448	cheY-homologous receiver domain
AKJ08_RS00275	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS00275	SM00387	Histidine kinase-like ATPases
AKJ08_RS00275	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS00285	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AKJ08_RS00300	SM00563	Phosphate acyltransferases
AKJ08_RS00310	SM00028	Tetratricopeptide repeats
AKJ08_RS00355	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS00365	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKJ08_RS00365	SM00493	AKJ08_RS00365
AKJ08_RS00370	SM00855	Phosphoglycerate mutase family
AKJ08_RS00375	SM00642	Alpha-amylase domain
AKJ08_RS00510	SM00387	Histidine kinase-like ATPases
AKJ08_RS00510	SM00448	cheY-homologous receiver domain
AKJ08_RS00620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS00635	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS00645	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS00690	SM00878	Biotin carboxylase C-terminal domain
AKJ08_RS00710	SM01103	AKJ08_RS00710
AKJ08_RS00715	SM00769	Water Stress and Hypersensitive response
AKJ08_RS00745	SM00363	S4 RNA-binding domain
AKJ08_RS00765	SM01329	AKJ08_RS00765
AKJ08_RS00825	SM00271	DnaJ molecular chaperone homology domain
AKJ08_RS00835	SM00028	Tetratricopeptide repeats
AKJ08_RS00890	SM00881	CoA binding domain
AKJ08_RS00895	SM00563	Phosphate acyltransferases
AKJ08_RS00935	SM00271	DnaJ molecular chaperone homology domain
AKJ08_RS01000	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS01005	SM00028	Tetratricopeptide repeats
AKJ08_RS01040	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS01075	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS01245	SM01321	AKJ08_RS01245
AKJ08_RS01305	SM00788	Adenylosuccinate synthetase
AKJ08_RS01310	SM01323	AKJ08_RS01310
AKJ08_RS01350	SM00530	Helix-turn-helix XRE-family like proteins 
AKJ08_RS01385	SM00746	metallochaperone-like domain
AKJ08_RS01430	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AKJ08_RS01445	SM00050	Homologues of snake disintegrins  
AKJ08_RS01450	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AKJ08_RS01475	SM00487	DEAD-like helicases superfamily
AKJ08_RS01475	SM00490	helicase superfamily c-terminal domain
AKJ08_RS01495	SM01133	AKJ08_RS01495
AKJ08_RS01525	SM00563	Phosphate acyltransferases
AKJ08_RS01530	SM00448	cheY-homologous receiver domain
AKJ08_RS01535	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS01545	SM00271	DnaJ molecular chaperone homology domain
AKJ08_RS01585	SM00028	Tetratricopeptide repeats
AKJ08_RS01630	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS01630	SM00962	SRP54-type protein, GTPase domain
AKJ08_RS01630	SM00963	SRP54-type protein, helical bundle domain
AKJ08_RS01650	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS01680	SM00400	zinc finger
AKJ08_RS01680	SM00493	AKJ08_RS01680
AKJ08_RS01700	SM00411	bacterial (prokaryotic) histone like domain
AKJ08_RS01710	SM00316	Ribosomal protein S1-like RNA-binding domain
AKJ08_RS01765	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS01780	SM00257	Lysin motif
AKJ08_RS01820	SM00327	von Willebrand factor (vWF) type A domain
AKJ08_RS01830	SM00327	von Willebrand factor (vWF) type A domain
AKJ08_RS01835	SM00327	von Willebrand factor (vWF) type A domain
AKJ08_RS01840	SM00028	Tetratricopeptide repeats
AKJ08_RS01850	SM00028	Tetratricopeptide repeats
AKJ08_RS01860	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AKJ08_RS01920	SM00870	AKJ08_RS01920
AKJ08_RS01945	SM00028	Tetratricopeptide repeats
AKJ08_RS01945	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS01960	SM00752	Horizontally Transferred TransMembrane Domain
AKJ08_RS01975	SM00316	Ribosomal protein S1-like RNA-binding domain
AKJ08_RS01975	SM00322	K homology RNA-binding domain
AKJ08_RS02005	SM01387	AKJ08_RS02005
AKJ08_RS02010	SM00316	Ribosomal protein S1-like RNA-binding domain
AKJ08_RS02010	SM00322	K homology RNA-binding domain
AKJ08_RS02015	SM01321	AKJ08_RS02015
AKJ08_RS02020	SM00635	Bacterial Ig-like domain 2
AKJ08_RS02025	SM00635	Bacterial Ig-like domain 2
AKJ08_RS02070	SM00479	AKJ08_RS02070
AKJ08_RS02075	SM00998	Adenylosuccinate lyase C-terminus
AKJ08_RS02105	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKJ08_RS02120	SM00448	cheY-homologous receiver domain
AKJ08_RS02260	SM00220	Serine/Threonine protein kinases, catalytic domain
AKJ08_RS02270	SM00829	Enoylreductase
AKJ08_RS02295	SM00919	Malic enzyme, NAD binding domain
AKJ08_RS02295	SM01274	AKJ08_RS02295
AKJ08_RS02345	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS02375	SM00530	Helix-turn-helix XRE-family like proteins 
AKJ08_RS02395	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS02395	SM00387	Histidine kinase-like ATPases
AKJ08_RS02395	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS02410	SM00460	Transglutaminase/protease-like homologues
AKJ08_RS02415	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS02470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS02485	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS02485	SM00448	cheY-homologous receiver domain
AKJ08_RS02490	SM00387	Histidine kinase-like ATPases
AKJ08_RS02490	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS02515	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS02650	SM00448	cheY-homologous receiver domain
AKJ08_RS02650	SM00862	Transcriptional regulatory protein, C terminal
AKJ08_RS02655	SM00387	Histidine kinase-like ATPases
AKJ08_RS02655	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS02685	SM00763	PrkA AAA domain
AKJ08_RS02695	SM00732	Likely ribonuclease with RNase H fold.
AKJ08_RS02700	SM00028	Tetratricopeptide repeats
AKJ08_RS02790	SM00612	AKJ08_RS02790
AKJ08_RS02820	SM00421	helix_turn_helix, Lux Regulon
AKJ08_RS02845	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKJ08_RS02845	SM00245	tail specific protease
AKJ08_RS02865	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AKJ08_RS02885	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS02935	SM00028	Tetratricopeptide repeats
AKJ08_RS02945	SM00240	Forkhead associated domain
AKJ08_RS02950	SM00646	AKJ08_RS02950
AKJ08_RS03005	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03005	SM00994	ClpX C4-type zinc finger
AKJ08_RS03005	SM01086	C-terminal, D2-small domain, of ClpB protein
AKJ08_RS03010	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03010	SM00464	Found in ATP-dependent protease La (LON)
AKJ08_RS03055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AKJ08_RS03160	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKJ08_RS03160	SM00481	DNA polymerase alpha chain like domain
AKJ08_RS03160	SM00483	DNA polymerase X family
AKJ08_RS03165	SM00854	Bacterial capsule synthesis protein PGA_cap
AKJ08_RS03170	SM00861	Transketolase, pyrimidine binding domain
AKJ08_RS03225	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03240	SM00331	Sigma factor PP2C-like phosphatases
AKJ08_RS03240	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AKJ08_RS03250	SM00957	SecA DEAD-like domain
AKJ08_RS03250	SM00958	SecA preprotein cross-linking domain
AKJ08_RS03315	SM00028	Tetratricopeptide repeats
AKJ08_RS03335	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS03340	SM01133	AKJ08_RS03340
AKJ08_RS03345	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AKJ08_RS03360	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS03365	SM00904	Riboflavin kinase
AKJ08_RS03385	SM00091	PAS domain
AKJ08_RS03385	SM00387	Histidine kinase-like ATPases
AKJ08_RS03385	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS03390	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03390	SM00448	cheY-homologous receiver domain
AKJ08_RS03420	SM00028	Tetratricopeptide repeats
AKJ08_RS03440	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKJ08_RS03455	SM00387	Histidine kinase-like ATPases
AKJ08_RS03455	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS03460	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03460	SM00448	cheY-homologous receiver domain
AKJ08_RS03470	SM00842	Cell division protein FtsA
AKJ08_RS03490	SM00965	Secretin and TonB N terminus short domain
AKJ08_RS03500	SM00960	Roadblock/LC7 domain
AKJ08_RS03505	SM00841	Elongation factor P, C-terminal
AKJ08_RS03505	SM01185	AKJ08_RS03505
AKJ08_RS03515	SM00878	Biotin carboxylase C-terminal domain
AKJ08_RS03525	SM00028	Tetratricopeptide repeats
AKJ08_RS03590	SM00861	Transketolase, pyrimidine binding domain
AKJ08_RS03595	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKJ08_RS03615	SM00245	tail specific protease
AKJ08_RS03630	SM00763	PrkA AAA domain
AKJ08_RS03660	SM00448	cheY-homologous receiver domain
AKJ08_RS03670	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS03675	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03675	SM00448	cheY-homologous receiver domain
AKJ08_RS03680	SM00448	cheY-homologous receiver domain
AKJ08_RS03685	SM00267	diguanylate cyclase
AKJ08_RS03685	SM00448	cheY-homologous receiver domain
AKJ08_RS03740	SM00829	Enoylreductase
AKJ08_RS03775	SM01091	Transporter associated domain
AKJ08_RS03785	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKJ08_RS03815	SM00563	Phosphate acyltransferases
AKJ08_RS03825	SM00853	MutL C terminal dimerisation domain
AKJ08_RS03825	SM01340	AKJ08_RS03825
AKJ08_RS03870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS03870	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS03880	SM00220	Serine/Threonine protein kinases, catalytic domain
AKJ08_RS03890	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AKJ08_RS03890	SM00475	5'-3' exonuclease
AKJ08_RS03890	SM00482	DNA polymerase A domain
AKJ08_RS03925	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AKJ08_RS03965	SM00280	Kazal type serine protease inhibitors
AKJ08_RS03990	SM00014	Acid phosphatase homologues
AKJ08_RS04010	SM00487	DEAD-like helicases superfamily
AKJ08_RS04010	SM00490	helicase superfamily c-terminal domain
AKJ08_RS04025	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04030	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04055	SM00481	DNA polymerase alpha chain like domain
AKJ08_RS04090	SM00567	E-Z type HEAT repeats
AKJ08_RS04115	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS04140	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AKJ08_RS04200	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04205	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS04215	SM01359	AKJ08_RS04215
AKJ08_RS04215	SM01360	AKJ08_RS04215
AKJ08_RS04235	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AKJ08_RS04255	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04255	SM01086	C-terminal, D2-small domain, of ClpB protein
AKJ08_RS04275	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04275	SM00393	Putative single-stranded nucleic acids-binding domain
AKJ08_RS04300	SM00357	Cold shock protein domain
AKJ08_RS04305	SM00851	MGS-like domain
AKJ08_RS04305	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AKJ08_RS04315	SM00487	DEAD-like helicases superfamily
AKJ08_RS04315	SM00490	helicase superfamily c-terminal domain
AKJ08_RS04360	SM00028	Tetratricopeptide repeats
AKJ08_RS04420	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04460	SM00838	Elongation factor G C-terminus
AKJ08_RS04495	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AKJ08_RS04520	SM00873	B3/4 domain
AKJ08_RS04520	SM00874	tRNA synthetase B5 domain
AKJ08_RS04520	SM00896	Ferredoxin-fold anticodon binding domain
AKJ08_RS04530	SM00411	bacterial (prokaryotic) histone like domain
AKJ08_RS04540	SM00257	Lysin motif
AKJ08_RS04560	SM00363	S4 RNA-binding domain
AKJ08_RS04565	SM00567	E-Z type HEAT repeats
AKJ08_RS04580	SM01192	AKJ08_RS04580
AKJ08_RS04580	SM01193	AKJ08_RS04580
AKJ08_RS04590	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS04605	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AKJ08_RS04610	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS04610	SM00387	Histidine kinase-like ATPases
AKJ08_RS04610	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS04670	SM00028	Tetratricopeptide repeats
AKJ08_RS04675	SM00028	Tetratricopeptide repeats
AKJ08_RS04685	SM00240	Forkhead associated domain
AKJ08_RS04725	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AKJ08_RS04725	SM00534	ATPase domain of DNA mismatch repair MUTS family
AKJ08_RS04730	SM00646	AKJ08_RS04730
AKJ08_RS04735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS04820	SM00028	Tetratricopeptide repeats
AKJ08_RS04835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS04850	SM00937	AKJ08_RS04850
AKJ08_RS04870	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04895	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS04910	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS04960	SM00072	Guanylate kinase homologues.
AKJ08_RS05010	SM00530	Helix-turn-helix XRE-family like proteins 
AKJ08_RS05025	SM00858	AKJ08_RS05025
AKJ08_RS05040	SM00240	Forkhead associated domain
AKJ08_RS05045	SM00028	Tetratricopeptide repeats
AKJ08_RS05045	SM00240	Forkhead associated domain
AKJ08_RS05060	SM00448	cheY-homologous receiver domain
AKJ08_RS05195	SM00984	UDP binding domain
AKJ08_RS05225	SM00271	DnaJ molecular chaperone homology domain
AKJ08_RS05235	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS05235	SM01086	C-terminal, D2-small domain, of ClpB protein
AKJ08_RS05250	SM00481	DNA polymerase alpha chain like domain
AKJ08_RS05275	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AKJ08_RS05290	SM00867	YceI-like domain 
AKJ08_RS05335	SM00240	Forkhead associated domain
AKJ08_RS05340	SM00240	Forkhead associated domain
AKJ08_RS05350	SM00100	Cyclic nucleotide-monophosphate binding domain
AKJ08_RS05355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS05355	SM00954	Region found in RelA / SpoT proteins
AKJ08_RS05475	SM00635	Bacterial Ig-like domain 2
AKJ08_RS05485	SM00635	Bacterial Ig-like domain 2
AKJ08_RS05490	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS05495	SM01058	CarD-like/TRCF domain
AKJ08_RS05505	SM00840	AKJ08_RS05505
AKJ08_RS05515	SM00487	DEAD-like helicases superfamily
AKJ08_RS05515	SM00490	helicase superfamily c-terminal domain
AKJ08_RS05530	SM00465	GIY-YIG type nucleases (URI domain)
AKJ08_RS05565	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS05565	SM01086	C-terminal, D2-small domain, of ClpB protein
AKJ08_RS05640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKJ08_RS05900	SM00387	Histidine kinase-like ATPases
AKJ08_RS05900	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS05925	SM00882	Coenzyme A transferase
AKJ08_RS05930	SM00882	Coenzyme A transferase
AKJ08_RS06010	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS06050	SM00448	cheY-homologous receiver domain
AKJ08_RS06135	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS06135	SM01027	Beta-Casp domain
AKJ08_RS06170	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS06195	SM00861	Transketolase, pyrimidine binding domain
AKJ08_RS06200	SM00363	S4 RNA-binding domain
AKJ08_RS06205	SM00448	cheY-homologous receiver domain
AKJ08_RS06210	SM00028	Tetratricopeptide repeats
AKJ08_RS06225	SM00470	ParB-like nuclease domain
AKJ08_RS06240	SM00100	Cyclic nucleotide-monophosphate binding domain
AKJ08_RS06240	SM00567	E-Z type HEAT repeats
AKJ08_RS06255	SM00028	Tetratricopeptide repeats
AKJ08_RS06320	SM00100	Cyclic nucleotide-monophosphate binding domain
AKJ08_RS06345	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS06345	SM01240	AKJ08_RS06345
AKJ08_RS06380	SM00028	Tetratricopeptide repeats
AKJ08_RS06440	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS06455	SM00487	DEAD-like helicases superfamily
AKJ08_RS06455	SM00490	helicase superfamily c-terminal domain
AKJ08_RS06515	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS06520	SM00028	Tetratricopeptide repeats
AKJ08_RS06575	SM00564	beta-propeller repeat
AKJ08_RS06605	SM00358	Double-stranded RNA binding motif
AKJ08_RS06605	SM00535	Ribonuclease III family
AKJ08_RS06665	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS06680	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKJ08_RS06680	SM00091	PAS domain
AKJ08_RS06680	SM00387	Histidine kinase-like ATPases
AKJ08_RS06680	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS06680	SM00448	cheY-homologous receiver domain
AKJ08_RS06685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS06685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKJ08_RS06685	SM00387	Histidine kinase-like ATPases
AKJ08_RS06685	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS06685	SM00448	cheY-homologous receiver domain
AKJ08_RS06695	SM00363	S4 RNA-binding domain
AKJ08_RS06700	SM01321	AKJ08_RS06700
AKJ08_RS06780	SM00635	Bacterial Ig-like domain 2
AKJ08_RS06790	SM00635	Bacterial Ig-like domain 2
AKJ08_RS06800	SM00635	Bacterial Ig-like domain 2
AKJ08_RS06810	SM00635	Bacterial Ig-like domain 2
AKJ08_RS06815	SM00635	Bacterial Ig-like domain 2
AKJ08_RS06855	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS06855	SM01091	Transporter associated domain
AKJ08_RS06860	SM00060	Fibronectin type 3 domain
AKJ08_RS06865	SM00562	AKJ08_RS06865
AKJ08_RS06900	SM01329	AKJ08_RS06900
AKJ08_RS06920	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AKJ08_RS06935	SM00155	Phospholipase D. Active site motifs.
AKJ08_RS06955	SM00838	Elongation factor G C-terminus
AKJ08_RS06980	SM00836	DALR anticodon binding domain
AKJ08_RS06980	SM01016	Arginyl tRNA synthetase N terminal dom
AKJ08_RS06985	SM00028	Tetratricopeptide repeats
AKJ08_RS07020	SM00448	cheY-homologous receiver domain
AKJ08_RS07035	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS07055	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS07085	SM00947	Carbonic anhydrase
AKJ08_RS07090	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS07095	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS07190	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS07190	SM00267	diguanylate cyclase
AKJ08_RS07225	SM00900	AKJ08_RS07225
AKJ08_RS07270	SM00834	Putative regulatory protein
AKJ08_RS07300	SM01004	Delta-aminolevulinic acid dehydratase
AKJ08_RS07325	SM01001	AIR carboxylase
AKJ08_RS07330	SM01209	AKJ08_RS07330
AKJ08_RS07330	SM01210	AKJ08_RS07330
AKJ08_RS07335	SM00798	AICARFT/IMPCHase bienzyme
AKJ08_RS07335	SM00851	MGS-like domain
AKJ08_RS07375	SM00235	Zinc-dependent metalloprotease
AKJ08_RS07400	SM00387	Histidine kinase-like ATPases
AKJ08_RS07400	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS07405	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS07405	SM00448	cheY-homologous receiver domain
AKJ08_RS07465	SM00671	Sel1-like repeats.
AKJ08_RS07480	SM00822	AKJ08_RS07480
AKJ08_RS07490	SM00028	Tetratricopeptide repeats
AKJ08_RS07495	SM00564	beta-propeller repeat
AKJ08_RS07575	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS07665	SM00487	DEAD-like helicases superfamily
AKJ08_RS07695	SM00564	beta-propeller repeat
AKJ08_RS07745	SM00861	Transketolase, pyrimidine binding domain
AKJ08_RS07815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS07815	SM00267	diguanylate cyclase
AKJ08_RS07890	SM00530	Helix-turn-helix XRE-family like proteins 
AKJ08_RS07910	SM00448	cheY-homologous receiver domain
AKJ08_RS07915	SM00706	Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
AKJ08_RS07980	SM00825	Beta-ketoacyl synthase
AKJ08_RS07990	SM00822	AKJ08_RS07990
AKJ08_RS07995	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AKJ08_RS08040	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08070	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08070	SM00962	SRP54-type protein, GTPase domain
AKJ08_RS08070	SM00963	SRP54-type protein, helical bundle domain
AKJ08_RS08095	SM00028	Tetratricopeptide repeats
AKJ08_RS08135	SM00507	HNH nucleases
AKJ08_RS08150	SM00387	Histidine kinase-like ATPases
AKJ08_RS08150	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS08155	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08155	SM00448	cheY-homologous receiver domain
AKJ08_RS08205	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08215	SM01005	Alanine racemase, C-terminal domain
AKJ08_RS08275	SM00387	Histidine kinase-like ATPases
AKJ08_RS08275	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS08280	SM00448	cheY-homologous receiver domain
AKJ08_RS08295	SM00240	Forkhead associated domain
AKJ08_RS08305	SM00028	Tetratricopeptide repeats
AKJ08_RS08345	SM00028	Tetratricopeptide repeats
AKJ08_RS08355	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08355	SM00448	cheY-homologous receiver domain
AKJ08_RS08370	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08425	SM00240	Forkhead associated domain
AKJ08_RS08425	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08515	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08525	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKJ08_RS08550	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AKJ08_RS08565	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKJ08_RS08585	SM00220	Serine/Threonine protein kinases, catalytic domain
AKJ08_RS08600	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08610	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08635	SM01409	AKJ08_RS08635
AKJ08_RS08640	SM00883	Chaperonin 10 Kd subunit
AKJ08_RS08680	SM00968	SMC proteins Flexible Hinge Domain
AKJ08_RS08685	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08690	SM00028	Tetratricopeptide repeats
AKJ08_RS08705	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08705	SM00448	cheY-homologous receiver domain
AKJ08_RS08715	SM00100	Cyclic nucleotide-monophosphate binding domain
AKJ08_RS08715	SM00419	helix_turn_helix, cAMP Regulatory protein
AKJ08_RS08765	SM00357	Cold shock protein domain
AKJ08_RS08765	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS08765	SM00959	Rho termination factor, N-terminal domain
AKJ08_RS08770	SM00292	breast cancer carboxy-terminal domain
AKJ08_RS08770	SM00532	Ligase N family
AKJ08_RS08800	SM00316	Ribosomal protein S1-like RNA-binding domain
AKJ08_RS08815	SM00360	RNA recognition motif
AKJ08_RS08915	SM00411	bacterial (prokaryotic) histone like domain
AKJ08_RS08920	SM00642	Alpha-amylase domain
AKJ08_RS08985	SM00487	DEAD-like helicases superfamily
AKJ08_RS08985	SM00490	helicase superfamily c-terminal domain
AKJ08_RS09000	SM01321	AKJ08_RS09000
AKJ08_RS09035	SM00851	MGS-like domain
AKJ08_RS09035	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AKJ08_RS09040	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AKJ08_RS09080	SM00450	Rhodanese Homology Domain
AKJ08_RS09085	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
AKJ08_RS09085	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
AKJ08_RS09085	SM00481	DNA polymerase alpha chain like domain
AKJ08_RS09105	SM00409	Immunoglobulin
AKJ08_RS09160	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS09200	SM01329	AKJ08_RS09200
AKJ08_RS09250	SM00363	S4 RNA-binding domain
AKJ08_RS09260	SM00953	AKJ08_RS09260
AKJ08_RS09285	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS09310	SM00935	Outer membrane protein (OmpH-like)
AKJ08_RS09330	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS09330	SM00464	Found in ATP-dependent protease La (LON)
AKJ08_RS09345	SM00240	Forkhead associated domain
AKJ08_RS09390	SM00316	Ribosomal protein S1-like RNA-binding domain
AKJ08_RS09475	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AKJ08_RS09480	SM00100	Cyclic nucleotide-monophosphate binding domain
AKJ08_RS09480	SM00331	Sigma factor PP2C-like phosphatases
AKJ08_RS09480	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AKJ08_RS09530	SM00662	RNA polymerases D
AKJ08_RS09535	SM00363	S4 RNA-binding domain
AKJ08_RS09535	SM01390	AKJ08_RS09535
AKJ08_RS09610	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AKJ08_RS09615	SM01374	AKJ08_RS09615
AKJ08_RS09635	SM00322	K homology RNA-binding domain
AKJ08_RS09650	SM01382	AKJ08_RS09650
AKJ08_RS09650	SM01383	AKJ08_RS09650
AKJ08_RS09665	SM01403	AKJ08_RS09665
AKJ08_RS09675	SM00838	Elongation factor G C-terminus
AKJ08_RS09675	SM00889	Elongation factor G, domain IV
AKJ08_RS09725	SM00235	Zinc-dependent metalloprotease
AKJ08_RS09725	SM00274	Follistatin-N-terminal domain-like
AKJ08_RS09730	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AKJ08_RS09750	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKJ08_RS09765	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS09790	SM00897	FIST N domain
AKJ08_RS09790	SM01204	AKJ08_RS09790
AKJ08_RS09795	SM00387	Histidine kinase-like ATPases
AKJ08_RS09795	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS09795	SM00448	cheY-homologous receiver domain
AKJ08_RS09800	SM00448	cheY-homologous receiver domain
AKJ08_RS09805	SM00448	cheY-homologous receiver domain
AKJ08_RS09810	SM00091	PAS domain
AKJ08_RS09810	SM00387	Histidine kinase-like ATPases
AKJ08_RS09810	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS09810	SM00448	cheY-homologous receiver domain
AKJ08_RS09815	SM00448	cheY-homologous receiver domain
AKJ08_RS09885	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS09910	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS09915	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS09935	SM00953	AKJ08_RS09935
AKJ08_RS10005	SM00244	prohibitin homologues
AKJ08_RS10015	SM00986	Uracil DNA glycosylase superfamily
AKJ08_RS10015	SM00987	UreE urease accessory protein, C-terminal domain 
AKJ08_RS10050	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AKJ08_RS10050	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AKJ08_RS10065	SM00448	cheY-homologous receiver domain
AKJ08_RS10105	SM00448	cheY-homologous receiver domain
AKJ08_RS10110	SM00028	Tetratricopeptide repeats
AKJ08_RS10120	SM00663	RNA polymerase I subunit A N-terminus
AKJ08_RS10145	SM00649	Ribosomal protein L11/L12
AKJ08_RS10150	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AKJ08_RS10150	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AKJ08_RS10195	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AKJ08_RS10230	SM00670	Large family of predicted nucleotide-binding domains
AKJ08_RS10240	SM00060	Fibronectin type 3 domain
AKJ08_RS10255	SM01266	AKJ08_RS10255
AKJ08_RS10265	SM00028	Tetratricopeptide repeats
AKJ08_RS10310	SM00861	Transketolase, pyrimidine binding domain
AKJ08_RS10345	SM00387	Histidine kinase-like ATPases
AKJ08_RS10345	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS10355	SM00463	Small MutS-related domain
AKJ08_RS10355	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AKJ08_RS10355	SM00534	ATPase domain of DNA mismatch repair MUTS family
AKJ08_RS10365	SM00316	Ribosomal protein S1-like RNA-binding domain
AKJ08_RS10365	SM00357	Cold shock protein domain
AKJ08_RS10365	SM00955	AKJ08_RS10365
AKJ08_RS10370	SM00450	Rhodanese Homology Domain
AKJ08_RS10375	SM00422	helix_turn_helix, mercury resistance
AKJ08_RS10395	SM00861	Transketolase, pyrimidine binding domain
AKJ08_RS10400	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS10425	SM00448	cheY-homologous receiver domain
AKJ08_RS10425	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS10430	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS10430	SM00994	ClpX C4-type zinc finger
AKJ08_RS10430	SM01086	C-terminal, D2-small domain, of ClpB protein
AKJ08_RS10480	SM00387	Histidine kinase-like ATPases
AKJ08_RS10485	SM00421	helix_turn_helix, Lux Regulon
AKJ08_RS10485	SM00448	cheY-homologous receiver domain
AKJ08_RS10500	SM00893	Electron transfer flavoprotein domain
AKJ08_RS10505	SM00893	Electron transfer flavoprotein domain
AKJ08_RS10550	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS10580	SM01130	AKJ08_RS10580
AKJ08_RS10670	SM00487	DEAD-like helicases superfamily
AKJ08_RS10670	SM00490	helicase superfamily c-terminal domain
AKJ08_RS10680	SM00478	endonuclease III
AKJ08_RS10705	SM00852	Probable molybdopterin binding domain
AKJ08_RS10730	SM00093	SERine  Proteinase INhibitors
AKJ08_RS10735	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS10740	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS10770	SM00960	Roadblock/LC7 domain
AKJ08_RS10800	SM00650	Ribosomal RNA adenine dimethylases
AKJ08_RS10810	SM00448	cheY-homologous receiver domain
AKJ08_RS10830	SM00331	Sigma factor PP2C-like phosphatases
AKJ08_RS10830	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AKJ08_RS10890	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS10920	SM00563	Phosphate acyltransferases
AKJ08_RS10930	SM00327	von Willebrand factor (vWF) type A domain
AKJ08_RS10935	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS10950	SM00240	Forkhead associated domain
AKJ08_RS10965	SM00878	Biotin carboxylase C-terminal domain
AKJ08_RS10970	SM00357	Cold shock protein domain
AKJ08_RS10975	SM00864	Tubulin/FtsZ family, GTPase domain
AKJ08_RS10975	SM00865	Tubulin/FtsZ family, C-terminal domain
AKJ08_RS10980	SM00842	Cell division protein FtsA
AKJ08_RS11045	SM00740	AKJ08_RS11045
AKJ08_RS11080	SM00014	Acid phosphatase homologues
AKJ08_RS11105	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AKJ08_RS11105	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AKJ08_RS11110	SM00448	cheY-homologous receiver domain
AKJ08_RS11110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS11115	SM01058	CarD-like/TRCF domain
AKJ08_RS11135	SM01230	AKJ08_RS11135
AKJ08_RS11200	SM00271	DnaJ molecular chaperone homology domain
AKJ08_RS11260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKJ08_RS11260	SM00387	Histidine kinase-like ATPases
AKJ08_RS11260	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS11280	SM00448	cheY-homologous receiver domain
AKJ08_RS11285	SM00267	diguanylate cyclase
AKJ08_RS11290	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKJ08_RS11320	SM01400	AKJ08_RS11320
AKJ08_RS11350	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS11365	SM00327	von Willebrand factor (vWF) type A domain
AKJ08_RS11410	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS11410	SM01086	C-terminal, D2-small domain, of ClpB protein
AKJ08_RS11415	SM00530	Helix-turn-helix XRE-family like proteins 
AKJ08_RS11425	SM00822	AKJ08_RS11425
AKJ08_RS11435	SM00487	DEAD-like helicases superfamily
AKJ08_RS11435	SM00490	helicase superfamily c-terminal domain
AKJ08_RS11440	SM00937	AKJ08_RS11440
AKJ08_RS11605	SM00422	helix_turn_helix, mercury resistance
AKJ08_RS11645	SM00267	diguanylate cyclase
AKJ08_RS11650	SM00267	diguanylate cyclase
AKJ08_RS11680	SM00635	Bacterial Ig-like domain 2
AKJ08_RS11685	SM00752	Horizontally Transferred TransMembrane Domain
AKJ08_RS11730	SM00226	Low molecular weight phosphatase family
AKJ08_RS11740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS11740	SM00387	Histidine kinase-like ATPases
AKJ08_RS11740	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS11770	SM00635	Bacterial Ig-like domain 2
AKJ08_RS11775	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS11775	SM00464	Found in ATP-dependent protease La (LON)
AKJ08_RS11780	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS11780	SM00091	PAS domain
AKJ08_RS11780	SM00387	Histidine kinase-like ATPases
AKJ08_RS11780	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS11795	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS11795	SM00924	MgtE intracellular N domain
AKJ08_RS11810	SM00316	Ribosomal protein S1-like RNA-binding domain
AKJ08_RS11810	SM00732	Likely ribonuclease with RNase H fold.
AKJ08_RS11820	SM00822	AKJ08_RS11820
AKJ08_RS11820	SM00825	Beta-ketoacyl synthase
AKJ08_RS11820	SM00826	AKJ08_RS11820
AKJ08_RS11820	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AKJ08_RS11825	SM00825	Beta-ketoacyl synthase
AKJ08_RS11825	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AKJ08_RS11855	SM00530	Helix-turn-helix XRE-family like proteins 
AKJ08_RS11880	SM00090	RIO-like kinase
AKJ08_RS11885	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS11890	SM00487	DEAD-like helicases superfamily
AKJ08_RS11890	SM00490	helicase superfamily c-terminal domain
AKJ08_RS11910	SM00831	Cation transporter/ATPase, N-terminus
AKJ08_RS11915	SM00073	Histidine Phosphotransfer domain
AKJ08_RS11915	SM00267	diguanylate cyclase
AKJ08_RS11915	SM00448	cheY-homologous receiver domain
AKJ08_RS11935	SM01321	AKJ08_RS11935
AKJ08_RS11965	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS11975	SM00822	AKJ08_RS11975
AKJ08_RS11990	SM00635	Bacterial Ig-like domain 2
AKJ08_RS12005	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS12020	SM00387	Histidine kinase-like ATPases
AKJ08_RS12040	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS12045	SM00448	cheY-homologous receiver domain
AKJ08_RS12045	SM00862	Transcriptional regulatory protein, C terminal
AKJ08_RS12050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKJ08_RS12050	SM00387	Histidine kinase-like ATPases
AKJ08_RS12050	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS12065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS12065	SM00220	Serine/Threonine protein kinases, catalytic domain
AKJ08_RS12065	SM00387	Histidine kinase-like ATPases
AKJ08_RS12065	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS12090	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS12110	SM00507	HNH nucleases
AKJ08_RS12125	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKJ08_RS12205	SM00448	cheY-homologous receiver domain
AKJ08_RS12205	SM00862	Transcriptional regulatory protein, C terminal
AKJ08_RS12260	SM00327	von Willebrand factor (vWF) type A domain
AKJ08_RS12265	SM00327	von Willebrand factor (vWF) type A domain
AKJ08_RS12310	SM00028	Tetratricopeptide repeats
AKJ08_RS12325	SM00028	Tetratricopeptide repeats
AKJ08_RS12340	SM00240	Forkhead associated domain
AKJ08_RS12350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS12400	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS12425	SM00421	helix_turn_helix, Lux Regulon
AKJ08_RS12425	SM00448	cheY-homologous receiver domain
AKJ08_RS12460	SM00341	Helicase and RNase D C-terminal
AKJ08_RS12460	SM00487	DEAD-like helicases superfamily
AKJ08_RS12460	SM00490	helicase superfamily c-terminal domain
AKJ08_RS12470	SM00028	Tetratricopeptide repeats
AKJ08_RS12520	SM00357	Cold shock protein domain
AKJ08_RS12525	SM00463	Small MutS-related domain
AKJ08_RS12575	SM00478	endonuclease III
AKJ08_RS12610	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKJ08_RS12615	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS12650	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS12675	SM00829	Enoylreductase
AKJ08_RS12685	SM00822	AKJ08_RS12685
AKJ08_RS12700	SM00822	AKJ08_RS12700
AKJ08_RS12715	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS12725	SM00028	Tetratricopeptide repeats
AKJ08_RS12800	SM00448	cheY-homologous receiver domain
AKJ08_RS12805	SM00450	Rhodanese Homology Domain
AKJ08_RS12850	SM00267	diguanylate cyclase
AKJ08_RS12850	SM00448	cheY-homologous receiver domain
AKJ08_RS12865	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS12890	SM00984	UDP binding domain
AKJ08_RS12950	SM00822	AKJ08_RS12950
AKJ08_RS12960	SM00280	Kazal type serine protease inhibitors
AKJ08_RS12965	SM00280	Kazal type serine protease inhibitors
AKJ08_RS13000	SM00220	Serine/Threonine protein kinases, catalytic domain
AKJ08_RS13015	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS13035	SM00028	Tetratricopeptide repeats
AKJ08_RS13105	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS13105	SM00876	Biotin and Thiamin Synthesis associated domain
AKJ08_RS13120	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS13155	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AKJ08_RS13180	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AKJ08_RS13180	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS13180	SM00240	Forkhead associated domain
AKJ08_RS13195	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS13245	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AKJ08_RS13275	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS13275	SM00448	cheY-homologous receiver domain
AKJ08_RS13370	SM00387	Histidine kinase-like ATPases
AKJ08_RS13370	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS13375	SM00448	cheY-homologous receiver domain
AKJ08_RS13375	SM00862	Transcriptional regulatory protein, C terminal
AKJ08_RS13385	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS13465	SM00996	S-adenosyl-L-homocysteine hydrolase
AKJ08_RS13465	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AKJ08_RS13485	SM01321	AKJ08_RS13485
AKJ08_RS13505	SM00475	5'-3' exonuclease
AKJ08_RS13510	SM00927	DNA mismatch repair enzyme MutH
AKJ08_RS13565	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AKJ08_RS13570	SM00825	Beta-ketoacyl synthase
AKJ08_RS13600	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS13600	SM01086	C-terminal, D2-small domain, of ClpB protein
AKJ08_RS13610	SM01091	Transporter associated domain
AKJ08_RS13640	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AKJ08_RS13640	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AKJ08_RS13640	SM00493	AKJ08_RS13640
AKJ08_RS13665	SM00028	Tetratricopeptide repeats
AKJ08_RS13670	SM00028	Tetratricopeptide repeats
AKJ08_RS13680	SM00260	Two component signalling adaptor domain
AKJ08_RS13690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKJ08_RS13695	SM00073	Histidine Phosphotransfer domain
AKJ08_RS13695	SM00260	Two component signalling adaptor domain
AKJ08_RS13695	SM00387	Histidine kinase-like ATPases
AKJ08_RS13695	SM00448	cheY-homologous receiver domain
AKJ08_RS13700	SM00448	cheY-homologous receiver domain
AKJ08_RS13705	SM00028	Tetratricopeptide repeats
AKJ08_RS13705	SM00138	Methyltransferase, chemotaxis proteins 
AKJ08_RS13710	SM00448	cheY-homologous receiver domain
AKJ08_RS13730	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS13755	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS13760	SM00179	Calcium-binding EGF-like domain
AKJ08_RS13760	SM00181	Epidermal growth factor-like domain.
AKJ08_RS13805	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS13815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS13815	SM00387	Histidine kinase-like ATPases
AKJ08_RS13815	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS13835	SM00988	UreE urease accessory protein, N-terminal domain
AKJ08_RS13905	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS13910	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS14020	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS14060	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS14105	SM00448	cheY-homologous receiver domain
AKJ08_RS14105	SM00862	Transcriptional regulatory protein, C terminal
AKJ08_RS14110	SM00387	Histidine kinase-like ATPases
AKJ08_RS14110	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS14145	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AKJ08_RS14145	SM01232	AKJ08_RS14145
AKJ08_RS14180	SM00996	S-adenosyl-L-homocysteine hydrolase
AKJ08_RS14180	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AKJ08_RS14235	SM00014	Acid phosphatase homologues
AKJ08_RS14245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS14245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AKJ08_RS14255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKJ08_RS14255	SM00387	Histidine kinase-like ATPases
AKJ08_RS14255	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS14260	SM00448	cheY-homologous receiver domain
AKJ08_RS14260	SM00862	Transcriptional regulatory protein, C terminal
AKJ08_RS14275	SM00344	helix_turn_helix ASNC type
AKJ08_RS14285	SM00563	Phosphate acyltransferases
AKJ08_RS14290	SM01219	AKJ08_RS14290
AKJ08_RS14360	SM00478	endonuclease III
AKJ08_RS14390	SM00829	Enoylreductase
AKJ08_RS14470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKJ08_RS14485	SM00829	Enoylreductase
AKJ08_RS14515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AKJ08_RS14560	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS14595	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS14595	SM01043	Bacterial transcriptional activator domain
AKJ08_RS14600	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS14605	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS14610	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS14630	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS14650	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS14775	SM00919	Malic enzyme, NAD binding domain
AKJ08_RS14775	SM01274	AKJ08_RS14775
AKJ08_RS14780	SM00342	helix_turn_helix, arabinose operon control protein
AKJ08_RS14795	SM00487	DEAD-like helicases superfamily
AKJ08_RS14795	SM00490	helicase superfamily c-terminal domain
AKJ08_RS14870	SM00487	DEAD-like helicases superfamily
AKJ08_RS14870	SM00490	helicase superfamily c-terminal domain
AKJ08_RS14900	SM00387	Histidine kinase-like ATPases
AKJ08_RS15030	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKJ08_RS15115	SM00421	helix_turn_helix, Lux Regulon
AKJ08_RS15115	SM00448	cheY-homologous receiver domain
AKJ08_RS15150	SM00181	Epidermal growth factor-like domain.
AKJ08_RS15170	SM00226	Low molecular weight phosphatase family
AKJ08_RS15180	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKJ08_RS15185	SM00138	Methyltransferase, chemotaxis proteins 
AKJ08_RS15205	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS15210	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKJ08_RS15265	SM00244	prohibitin homologues
AKJ08_RS15295	SM00347	helix_turn_helix multiple antibiotic resistance protein
AKJ08_RS15370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKJ08_RS15375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AKJ08_RS15390	SM00797	Allophanate hydrolase subunit 2
AKJ08_RS15460	SM00530	Helix-turn-helix XRE-family like proteins 
AKJ08_RS15580	SM00448	cheY-homologous receiver domain
AKJ08_RS15600	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS15630	SM00932	Scaffold protein Nfu/NifU N terminal
AKJ08_RS15650	SM00387	Histidine kinase-like ATPases
AKJ08_RS15720	SM00487	DEAD-like helicases superfamily
AKJ08_RS15720	SM00490	helicase superfamily c-terminal domain
AKJ08_RS15720	SM00847	Helicase associated domain (HA2)  Add an annotation
AKJ08_RS15835	SM00387	Histidine kinase-like ATPases
AKJ08_RS15835	SM00433	TopoisomeraseII
AKJ08_RS15845	SM00480	DNA polymerase III beta subunit
AKJ08_RS15850	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS15850	SM00760	Bacterial dnaA protein helix-turn-helix domain
AKJ08_RS15865	SM01234	AKJ08_RS15865
AKJ08_RS15875	SM00393	Putative single-stranded nucleic acids-binding domain
AKJ08_RS15925	SM00470	ParB-like nuclease domain
AKJ08_RS15950	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS15975	SM00829	Enoylreductase
AKJ08_RS16050	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS16065	SM00867	YceI-like domain 
AKJ08_RS16075	SM01290	AKJ08_RS16075
AKJ08_RS16125	SM00448	cheY-homologous receiver domain
AKJ08_RS16130	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS16130	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKJ08_RS16130	SM00091	PAS domain
AKJ08_RS16130	SM00387	Histidine kinase-like ATPases
AKJ08_RS16130	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS16145	SM00769	Water Stress and Hypersensitive response
AKJ08_RS16165	SM00938	Nitrogen regulatory protein P-II
AKJ08_RS16170	SM00387	Histidine kinase-like ATPases
AKJ08_RS16170	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS16175	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS16175	SM00448	cheY-homologous receiver domain
AKJ08_RS16180	SM00567	E-Z type HEAT repeats
AKJ08_RS16325	SM00905	Dihydroneopterin aldolase
AKJ08_RS16330	SM00822	AKJ08_RS16330
AKJ08_RS16335	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AKJ08_RS16340	SM00487	DEAD-like helicases superfamily
AKJ08_RS16340	SM00490	helicase superfamily c-terminal domain
AKJ08_RS16340	SM00982	AKJ08_RS16340
AKJ08_RS16340	SM01058	CarD-like/TRCF domain
AKJ08_RS16355	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AKJ08_RS16360	SM00271	DnaJ molecular chaperone homology domain
AKJ08_RS16450	SM00829	Enoylreductase
AKJ08_RS16500	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS16595	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS16595	SM00962	SRP54-type protein, GTPase domain
AKJ08_RS16680	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS16720	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS16725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKJ08_RS16725	SM00091	PAS domain
AKJ08_RS16725	SM00387	Histidine kinase-like ATPases
AKJ08_RS16725	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS16750	SM00491	AKJ08_RS16750
AKJ08_RS16760	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS16760	SM00464	Found in ATP-dependent protease La (LON)
AKJ08_RS16770	SM00387	Histidine kinase-like ATPases
AKJ08_RS16770	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS16780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AKJ08_RS16780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKJ08_RS16790	SM00073	Histidine Phosphotransfer domain
AKJ08_RS16790	SM00260	Two component signalling adaptor domain
AKJ08_RS16790	SM00387	Histidine kinase-like ATPases
AKJ08_RS16795	SM01001	AIR carboxylase
AKJ08_RS16805	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS16805	SM00091	PAS domain
AKJ08_RS16805	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS16805	SM00448	cheY-homologous receiver domain
AKJ08_RS16825	SM00464	Found in ATP-dependent protease La (LON)
AKJ08_RS16895	SM00429	ig-like, plexins, transcription factors
AKJ08_RS16915	SM01230	AKJ08_RS16915
AKJ08_RS16930	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS16935	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS16955	SM00448	cheY-homologous receiver domain
AKJ08_RS16965	SM00387	Histidine kinase-like ATPases
AKJ08_RS16965	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS17020	SM00028	Tetratricopeptide repeats
AKJ08_RS17040	SM00829	Enoylreductase
AKJ08_RS17070	SM00984	UDP binding domain
AKJ08_RS17140	SM01144	AKJ08_RS17140
AKJ08_RS17155	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AKJ08_RS17155	SM00091	PAS domain
AKJ08_RS17155	SM00387	Histidine kinase-like ATPases
AKJ08_RS17155	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS17155	SM00448	cheY-homologous receiver domain
AKJ08_RS17160	SM00138	Methyltransferase, chemotaxis proteins 
AKJ08_RS17165	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS17165	SM00387	Histidine kinase-like ATPases
AKJ08_RS17165	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS17165	SM00448	cheY-homologous receiver domain
AKJ08_RS17180	SM01043	Bacterial transcriptional activator domain
AKJ08_RS17230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AKJ08_RS17230	SM00387	Histidine kinase-like ATPases
AKJ08_RS17230	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS17235	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS17235	SM00448	cheY-homologous receiver domain
AKJ08_RS17360	SM00867	YceI-like domain 
AKJ08_RS17385	SM00506	Appr-1"-p processing enzyme
AKJ08_RS17395	SM00849	Metallo-beta-lactamase superfamily
AKJ08_RS17405	SM00829	Enoylreductase
AKJ08_RS17415	SM00487	DEAD-like helicases superfamily
AKJ08_RS17415	SM00490	helicase superfamily c-terminal domain
AKJ08_RS17425	SM01011	Aminopeptidase P, N-terminal domain
AKJ08_RS17435	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS17465	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AKJ08_RS17465	SM00091	PAS domain
AKJ08_RS17465	SM00267	diguanylate cyclase
AKJ08_RS17470	SM00028	Tetratricopeptide repeats
AKJ08_RS17475	SM00434	DNA Topoisomerase IV
AKJ08_RS17525	SM00098	Alkaline phosphatase homologues
AKJ08_RS17530	SM00098	Alkaline phosphatase homologues
AKJ08_RS17560	SM00966	SpoVT / AbrB like domain 
AKJ08_RS17565	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS17655	SM00563	Phosphate acyltransferases
AKJ08_RS17660	SM00822	AKJ08_RS17660
AKJ08_RS17690	SM00487	DEAD-like helicases superfamily
AKJ08_RS17690	SM00490	helicase superfamily c-terminal domain
AKJ08_RS17715	SM00478	endonuclease III
AKJ08_RS17715	SM01009	AlkA N-terminal domain
AKJ08_RS17760	SM00450	Rhodanese Homology Domain
AKJ08_RS17805	SM00829	Enoylreductase
AKJ08_RS17820	SM00981	AKJ08_RS17820
AKJ08_RS17850	SM00481	DNA polymerase alpha chain like domain
AKJ08_RS17880	SM00450	Rhodanese Homology Domain
AKJ08_RS17915	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS17920	SM00838	Elongation factor G C-terminus
AKJ08_RS17920	SM00889	Elongation factor G, domain IV
AKJ08_RS17935	SM00341	Helicase and RNase D C-terminal
AKJ08_RS17935	SM00474	3'-5' exonuclease
AKJ08_RS17940	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AKJ08_RS17965	SM00642	Alpha-amylase domain
AKJ08_RS17980	SM00387	Histidine kinase-like ATPases
AKJ08_RS17980	SM00448	cheY-homologous receiver domain
AKJ08_RS17985	SM00387	Histidine kinase-like ATPases
AKJ08_RS17985	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS17985	SM00448	cheY-homologous receiver domain
AKJ08_RS18025	SM00710	Parallel beta-helix repeats
AKJ08_RS18035	SM00634	Bacterial Ig-like domain (group 1)
AKJ08_RS18040	SM00116	Domain in cystathionine beta-synthase and other proteins.
AKJ08_RS18045	SM00387	Histidine kinase-like ATPases
AKJ08_RS18045	SM00388	His Kinase A (phosphoacceptor) domain
AKJ08_RS18085	SM00382	ATPases associated with a variety of cellular activities
AKJ08_RS18085	SM00843	AKJ08_RS18085
AKJ08_RS18110	SM00845	GatB domain
AKJ08_RS18160	SM00729	Elongator protein 3, MiaB family, Radical SAM
AKJ08_RS18170	SM00849	Metallo-beta-lactamase superfamily
