WS08_RS00010 SM00382 ATPases associated with a variety of cellular activities WS08_RS00010 SM00760 Bacterial dnaA protein helix-turn-helix domain WS08_RS00015 SM00480 DNA polymerase III beta subunit WS08_RS00030 SM00387 Histidine kinase-like ATPases WS08_RS00030 SM00433 TopoisomeraseII WS08_RS00035 SM00434 DNA Topoisomerase IV WS08_RS00120 SM01350 WS08_RS00120 WS08_RS00155 SM01350 WS08_RS00155 WS08_RS00280 SM00829 Enoylreductase WS08_RS00310 SM01400 WS08_RS00310 WS08_RS00345 SM00448 cheY-homologous receiver domain WS08_RS00345 SM00862 Transcriptional regulatory protein, C terminal WS08_RS00350 SM00091 PAS domain WS08_RS00350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WS08_RS00350 SM00387 Histidine kinase-like ATPases WS08_RS00350 SM00388 His Kinase A (phosphoacceptor) domain WS08_RS00365 SM00849 Metallo-beta-lactamase superfamily WS08_RS00370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WS08_RS00380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WS08_RS00405 SM00487 DEAD-like helicases superfamily WS08_RS00405 SM00490 helicase superfamily c-terminal domain WS08_RS00415 SM01005 Alanine racemase, C-terminal domain WS08_RS00460 SM00072 Guanylate kinase homologues. WS08_RS00475 SM00382 ATPases associated with a variety of cellular activities WS08_RS00480 SM00062 Bacterial periplasmic substrate-binding proteins WS08_RS00480 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. WS08_RS00515 SM00382 ATPases associated with a variety of cellular activities WS08_RS00520 SM00382 ATPases associated with a variety of cellular activities WS08_RS00570 SM00855 Phosphoglycerate mutase family WS08_RS00575 SM00382 ATPases associated with a variety of cellular activities WS08_RS00640 SM00382 ATPases associated with a variety of cellular activities WS08_RS00650 SM00345 helix_turn_helix gluconate operon transcriptional repressor WS08_RS00650 SM00866 WS08_RS00650 WS08_RS00655 SM00363 S4 RNA-binding domain WS08_RS00655 SM01390 WS08_RS00655 WS08_RS00675 SM00788 Adenylosuccinate synthetase WS08_RS00715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WS08_RS00725 SM00479 WS08_RS00725 WS08_RS00725 SM00481 DNA polymerase alpha chain like domain WS08_RS00765 SM00487 DEAD-like helicases superfamily WS08_RS00765 SM00490 helicase superfamily c-terminal domain WS08_RS00780 SM00831 Cation transporter/ATPase, N-terminus WS08_RS00790 SM00316 Ribosomal protein S1-like RNA-binding domain WS08_RS00790 SM00732 Likely ribonuclease with RNase H fold. WS08_RS00830 SM00322 K homology RNA-binding domain WS08_RS00830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WS08_RS00845 SM01240 WS08_RS00845 WS08_RS00870 SM00530 Helix-turn-helix XRE-family like proteins WS08_RS00930 SM00267 diguanylate cyclase WS08_RS00940 SM00267 diguanylate cyclase WS08_RS00995 SM00841 Elongation factor P, C-terminal WS08_RS00995 SM01185 WS08_RS00995 WS08_RS01040 SM00838 Elongation factor G C-terminus WS08_RS01040 SM00889 Elongation factor G, domain IV WS08_RS01050 SM00382 ATPases associated with a variety of cellular activities WS08_RS01115 SM01192 WS08_RS01115 WS08_RS01115 SM01193 WS08_RS01115 WS08_RS01125 SM00316 Ribosomal protein S1-like RNA-binding domain WS08_RS01125 SM00357 Cold shock protein domain WS08_RS01125 SM00955 WS08_RS01125 WS08_RS01135 SM00062 Bacterial periplasmic substrate-binding proteins WS08_RS01135 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. WS08_RS01140 SM00382 ATPases associated with a variety of cellular activities WS08_RS01145 SM00986 Uracil DNA glycosylase superfamily WS08_RS01145 SM00987 UreE urease accessory protein, C-terminal domain WS08_RS01165 SM00479 WS08_RS01165 WS08_RS01205 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain WS08_RS01210 SM00851 MGS-like domain WS08_RS01210 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WS08_RS01215 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family WS08_RS01275 SM00493 WS08_RS01275 WS08_RS01280 SM00650 Ribosomal RNA adenine dimethylases WS08_RS01285 SM00116 Domain in cystathionine beta-synthase and other proteins. WS08_RS01325 SM00116 Domain in cystathionine beta-synthase and other proteins. WS08_RS01340 SM00487 DEAD-like helicases superfamily WS08_RS01340 SM00490 helicase superfamily c-terminal domain WS08_RS01340 SM00982 WS08_RS01340 WS08_RS01340 SM01058 CarD-like/TRCF domain WS08_RS01350 SM00363 S4 RNA-binding domain WS08_RS01370 SM00382 ATPases associated with a variety of cellular activities WS08_RS01510 SM00530 Helix-turn-helix XRE-family like proteins WS08_RS01525 SM00382 ATPases associated with a variety of cellular activities WS08_RS01530 SM00382 ATPases associated with a variety of cellular activities WS08_RS01535 SM00047 Lysozyme subfamily 2 WS08_RS01560 SM00357 Cold shock protein domain WS08_RS01625 SM00382 ATPases associated with a variety of cellular activities WS08_RS01660 SM01057 Eukaryotic-type carbonic anhydrase WS08_RS01675 SM00382 ATPases associated with a variety of cellular activities WS08_RS01680 SM00062 Bacterial periplasmic substrate-binding proteins WS08_RS01745 SM00740 WS08_RS01745 WS08_RS01770 SM00842 Cell division protein FtsA WS08_RS01775 SM00864 Tubulin/FtsZ family, GTPase domain WS08_RS01775 SM00865 Tubulin/FtsZ family, C-terminal domain WS08_RS01790 SM00363 S4 RNA-binding domain WS08_RS01805 SM00855 Phosphoglycerate mutase family WS08_RS01810 SM00028 Tetratricopeptide repeats WS08_RS01860 SM00487 DEAD-like helicases superfamily WS08_RS01860 SM00490 helicase superfamily c-terminal domain WS08_RS01875 SM00331 Sigma factor PP2C-like phosphatases WS08_RS01875 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain WS08_RS01880 SM00220 Serine/Threonine protein kinases, catalytic domain WS08_RS01880 SM00740 WS08_RS01880 WS08_RS01895 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain WS08_RS01910 SM01120 WS08_RS01910 WS08_RS01910 SM01121 WS08_RS01910 WS08_RS01915 SM00487 DEAD-like helicases superfamily WS08_RS01915 SM00490 helicase superfamily c-terminal domain WS08_RS01930 SM00358 Double-stranded RNA binding motif WS08_RS01930 SM00535 Ribonuclease III family WS08_RS01935 SM00968 SMC proteins Flexible Hinge Domain WS08_RS01940 SM00382 ATPases associated with a variety of cellular activities WS08_RS01940 SM00962 SRP54-type protein, GTPase domain WS08_RS01940 SM00963 SRP54-type protein, helical bundle domain WS08_RS01950 SM00382 ATPases associated with a variety of cellular activities WS08_RS01950 SM00962 SRP54-type protein, GTPase domain WS08_RS01950 SM00963 SRP54-type protein, helical bundle domain WS08_RS02055 SM00354 helix_turn _helix lactose operon repressor WS08_RS02115 SM00287 Bacterial SH3 domain homologues WS08_RS02115 SM00646 WS08_RS02115 WS08_RS02210 SM00382 ATPases associated with a variety of cellular activities WS08_RS02210 SM00843 WS08_RS02210 WS08_RS02215 SM00382 ATPases associated with a variety of cellular activities WS08_RS02230 SM00465 GIY-YIG type nucleases (URI domain) WS08_RS02255 SM01240 WS08_RS02255 WS08_RS02260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WS08_RS02265 SM00382 ATPases associated with a variety of cellular activities WS08_RS02305 SM01323 WS08_RS02305 WS08_RS02320 SM00487 DEAD-like helicases superfamily WS08_RS02320 SM00490 helicase superfamily c-terminal domain WS08_RS02325 SM01266 WS08_RS02325 WS08_RS02330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WS08_RS02340 SM00732 Likely ribonuclease with RNase H fold. WS08_RS02355 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WS08_RS02360 SM00849 Metallo-beta-lactamase superfamily WS08_RS02370 SM01387 WS08_RS02370 WS08_RS02385 SM00849 Metallo-beta-lactamase superfamily WS08_RS02405 SM00382 ATPases associated with a variety of cellular activities WS08_RS02405 SM00994 ClpX C4-type zinc finger WS08_RS02405 SM01086 C-terminal, D2-small domain, of ClpB protein WS08_RS02425 SM00463 Small MutS-related domain WS08_RS02425 SM00533 DNA-binding domain of DNA mismatch repair MUTS family WS08_RS02425 SM00534 ATPase domain of DNA mismatch repair MUTS family WS08_RS02455 SM00954 Region found in RelA / SpoT proteins WS08_RS02470 SM00116 Domain in cystathionine beta-synthase and other proteins. WS08_RS02470 SM00924 MgtE intracellular N domain WS08_RS02480 SM00322 K homology RNA-binding domain WS08_RS02520 SM00904 Riboflavin kinase WS08_RS02570 SM00844 GA module WS08_RS02585 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain WS08_RS02585 SM00437 Bacterial DNA topoisomerase I DNA-binding domain WS08_RS02585 SM00493 WS08_RS02585 WS08_RS02610 SM01207 WS08_RS02610 WS08_RS02615 SM00387 Histidine kinase-like ATPases WS08_RS02615 SM00433 TopoisomeraseII WS08_RS02620 SM00434 DNA Topoisomerase IV WS08_RS02635 SM00244 prohibitin homologues WS08_RS02640 SM01131 WS08_RS02640 WS08_RS02645 SM00345 helix_turn_helix gluconate operon transcriptional repressor WS08_RS02650 SM00116 Domain in cystathionine beta-synthase and other proteins. WS08_RS02650 SM00382 ATPases associated with a variety of cellular activities WS08_RS02695 SM00849 Metallo-beta-lactamase superfamily WS08_RS02725 SM00838 Elongation factor G C-terminus WS08_RS02760 SM00400 zinc finger WS08_RS02760 SM00493 WS08_RS02760 WS08_RS02775 SM00448 cheY-homologous receiver domain WS08_RS02775 SM00862 Transcriptional regulatory protein, C terminal WS08_RS02780 SM00387 Histidine kinase-like ATPases WS08_RS02780 SM00388 His Kinase A (phosphoacceptor) domain WS08_RS02810 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs WS08_RS02810 SM00474 3'-5' exonuclease WS08_RS02810 SM00475 5'-3' exonuclease WS08_RS02810 SM00482 DNA polymerase A domain WS08_RS02825 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain WS08_RS02825 SM01232 WS08_RS02825 WS08_RS02855 SM00448 cheY-homologous receiver domain WS08_RS02855 SM00862 Transcriptional regulatory protein, C terminal WS08_RS02860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WS08_RS02860 SM00387 Histidine kinase-like ATPases WS08_RS02860 SM00388 His Kinase A (phosphoacceptor) domain WS08_RS02875 SM00448 cheY-homologous receiver domain WS08_RS02875 SM00850 LytTr DNA-binding domain WS08_RS02925 SM00382 ATPases associated with a variety of cellular activities WS08_RS02940 SM00635 Bacterial Ig-like domain 2 WS08_RS02970 SM00437 Bacterial DNA topoisomerase I DNA-binding domain WS08_RS02970 SM00493 WS08_RS02970 WS08_RS03120 SM00878 Biotin carboxylase C-terminal domain WS08_RS03135 SM00825 Beta-ketoacyl synthase WS08_RS03140 SM00822 WS08_RS03140 WS08_RS03145 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. WS08_RS03165 SM00347 helix_turn_helix multiple antibiotic resistance protein WS08_RS03180 SM00382 ATPases associated with a variety of cellular activities WS08_RS03255 SM00267 diguanylate cyclase WS08_RS03280 SM00382 ATPases associated with a variety of cellular activities WS08_RS03295 SM00487 DEAD-like helicases superfamily WS08_RS03295 SM00490 helicase superfamily c-terminal domain WS08_RS03310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WS08_RS03310 SM00292 breast cancer carboxy-terminal domain WS08_RS03310 SM00532 Ligase N family WS08_RS03340 SM00981 WS08_RS03340 WS08_RS03390 SM00479 WS08_RS03390 WS08_RS03390 SM00491 WS08_RS03390 WS08_RS03420 SM00507 HNH nucleases WS08_RS03485 SM00562 WS08_RS03485 WS08_RS03545 SM00382 ATPases associated with a variety of cellular activities WS08_RS03565 SM00382 ATPases associated with a variety of cellular activities WS08_RS03585 SM00861 Transketolase, pyrimidine binding domain WS08_RS03600 SM00642 Alpha-amylase domain WS08_RS03620 SM00257 Lysin motif WS08_RS03650 SM00354 helix_turn _helix lactose operon repressor WS08_RS03665 SM01209 WS08_RS03665 WS08_RS03665 SM01210 WS08_RS03665 WS08_RS03670 SM00798 AICARFT/IMPCHase bienzyme WS08_RS03670 SM00851 MGS-like domain WS08_RS03695 SM01211 WS08_RS03695 WS08_RS03715 SM01001 AIR carboxylase WS08_RS03750 SM00838 Elongation factor G C-terminus WS08_RS03840 SM00028 Tetratricopeptide repeats WS08_RS03880 SM00411 bacterial (prokaryotic) histone like domain WS08_RS03890 SM00316 Ribosomal protein S1-like RNA-binding domain WS08_RS03905 SM00487 DEAD-like helicases superfamily WS08_RS03905 SM00490 helicase superfamily c-terminal domain WS08_RS03920 SM00363 S4 RNA-binding domain WS08_RS03990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WS08_RS03990 SM00954 Region found in RelA / SpoT proteins WS08_RS03995 SM00481 DNA polymerase alpha chain like domain WS08_RS04010 SM00382 ATPases associated with a variety of cellular activities WS08_RS04025 SM00487 DEAD-like helicases superfamily WS08_RS04080 SM00563 Phosphate acyltransferases WS08_RS04120 SM00271 DnaJ molecular chaperone homology domain WS08_RS04180 SM00382 ATPases associated with a variety of cellular activities WS08_RS04200 SM00357 Cold shock protein domain WS08_RS04230 SM00382 ATPases associated with a variety of cellular activities WS08_RS04260 SM00155 Phospholipase D. Active site motifs. WS08_RS04285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WS08_RS04320 SM00836 DALR anticodon binding domain WS08_RS04320 SM01016 Arginyl tRNA synthetase N terminal dom WS08_RS04345 SM00046 Diacylglycerol kinase catalytic domain (presumed) WS08_RS04350 SM00845 GatB domain WS08_RS04390 SM01400 WS08_RS04390 WS08_RS04445 SM00267 diguanylate cyclase WS08_RS04480 SM00354 helix_turn _helix lactose operon repressor WS08_RS04505 SM00529 Helix-turn-helix diphteria tox regulatory element WS08_RS04520 SM00881 CoA binding domain WS08_RS04525 SM00487 DEAD-like helicases superfamily WS08_RS04525 SM00490 helicase superfamily c-terminal domain WS08_RS04590 SM00998 Adenylosuccinate lyase C-terminus WS08_RS04600 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WS08_RS04605 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain WS08_RS04615 SM00363 S4 RNA-binding domain WS08_RS04640 SM00838 Elongation factor G C-terminus WS08_RS04650 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WS08_RS04665 SM00530 Helix-turn-helix XRE-family like proteins WS08_RS04690 SM00382 ATPases associated with a variety of cellular activities WS08_RS04695 SM00062 Bacterial periplasmic substrate-binding proteins WS08_RS04700 SM00062 Bacterial periplasmic substrate-binding proteins WS08_RS04710 SM00892 DNA/RNA non-specific endonuclease WS08_RS04795 SM00316 Ribosomal protein S1-like RNA-binding domain WS08_RS04810 SM01409 WS08_RS04810 WS08_RS04815 SM00072 Guanylate kinase homologues. WS08_RS04875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WS08_RS04885 SM00853 MutL C terminal dimerisation domain WS08_RS04885 SM01340 WS08_RS04885 WS08_RS04890 SM00533 DNA-binding domain of DNA mismatch repair MUTS family WS08_RS04890 SM00534 ATPase domain of DNA mismatch repair MUTS family WS08_RS04915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WS08_RS04925 SM01103 WS08_RS04925 WS08_RS04960 SM00883 Chaperonin 10 Kd subunit WS08_RS04965 SM00382 ATPases associated with a variety of cellular activities WS08_RS05000 SM00382 ATPases associated with a variety of cellular activities WS08_RS05040 SM00382 ATPases associated with a variety of cellular activities WS08_RS05045 SM00382 ATPases associated with a variety of cellular activities WS08_RS05170 SM00829 Enoylreductase WS08_RS05185 SM01133 WS08_RS05185 WS08_RS05210 SM00382 ATPases associated with a variety of cellular activities WS08_RS05225 SM00725 NEAr Transporter domain WS08_RS05230 SM00364 Leucine-rich repeats, bacterial type WS08_RS05230 SM00365 Leucine-rich repeat, SDS22-like subfamily WS08_RS05285 SM01230 WS08_RS05285 WS08_RS05290 SM00422 helix_turn_helix, mercury resistance WS08_RS05305 SM00450 Rhodanese Homology Domain WS08_RS05350 SM00873 B3/4 domain WS08_RS05350 SM00874 tRNA synthetase B5 domain WS08_RS05350 SM00896 Ferredoxin-fold anticodon binding domain WS08_RS05370 SM00967 RNA 2'-O ribose methyltransferase substrate binding WS08_RS05385 SM00937 WS08_RS05385 WS08_RS05390 SM00957 SecA DEAD-like domain WS08_RS05390 SM00958 SecA preprotein cross-linking domain WS08_RS05400 SM00382 ATPases associated with a variety of cellular activities WS08_RS05425 SM00382 ATPases associated with a variety of cellular activities WS08_RS05425 SM01086 C-terminal, D2-small domain, of ClpB protein WS08_RS05430 SM00829 Enoylreductase WS08_RS05460 SM00347 helix_turn_helix multiple antibiotic resistance protein WS08_RS05515 SM00382 ATPases associated with a variety of cellular activities WS08_RS05560 SM00382 ATPases associated with a variety of cellular activities WS08_RS05565 SM00382 ATPases associated with a variety of cellular activities WS08_RS05595 SM00382 ATPases associated with a variety of cellular activities WS08_RS05625 SM00649 Ribosomal protein L11/L12 WS08_RS05630 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. WS08_RS05645 SM00967 RNA 2'-O ribose methyltransferase substrate binding WS08_RS05650 SM00535 Ribonuclease III family WS08_RS05655 SM00840 WS08_RS05655 WS08_RS05680 SM00382 ATPases associated with a variety of cellular activities WS08_RS05680 SM00930 WS08_RS05680 WS08_RS05695 SM00662 RNA polymerases D WS08_RS05715 SM00316 Ribosomal protein S1-like RNA-binding domain WS08_RS05765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. WS08_RS05770 SM01374 WS08_RS05770 WS08_RS05790 SM00322 K homology RNA-binding domain WS08_RS05805 SM01382 WS08_RS05805 WS08_RS05805 SM01383 WS08_RS05805 WS08_RS05825 SM01403 WS08_RS05825 WS08_RS05890 SM00493 WS08_RS05890 WS08_RS05900 SM00382 ATPases associated with a variety of cellular activities WS08_RS05935 SM00530 Helix-turn-helix XRE-family like proteins WS08_RS05950 SM00663 RNA polymerase I subunit A N-terminus WS08_RS06010 SM00382 ATPases associated with a variety of cellular activities WS08_RS06075 SM00937 WS08_RS06075 WS08_RS06140 SM00382 ATPases associated with a variety of cellular activities WS08_RS06145 SM00382 ATPases associated with a variety of cellular activities WS08_RS06155 SM00855 Phosphoglycerate mutase family WS08_RS06170 SM00986 Uracil DNA glycosylase superfamily WS08_RS06170 SM00987 UreE urease accessory protein, C-terminal domain WS08_RS06230 SM00345 helix_turn_helix gluconate operon transcriptional repressor WS08_RS06230 SM00866 WS08_RS06230 WS08_RS06265 SM00382 ATPases associated with a variety of cellular activities WS08_RS06275 SM00382 ATPases associated with a variety of cellular activities WS08_RS06285 SM00347 helix_turn_helix multiple antibiotic resistance protein WS08_RS06290 SM00731 SprT homologues. WS08_RS06340 SM00387 Histidine kinase-like ATPases WS08_RS06340 SM00388 His Kinase A (phosphoacceptor) domain WS08_RS06345 SM00448 cheY-homologous receiver domain WS08_RS06345 SM00862 Transcriptional regulatory protein, C terminal WS08_RS06365 SM00470 ParB-like nuclease domain WS08_RS06380 SM00478 endonuclease III WS08_RS06385 SM00387 Histidine kinase-like ATPases WS08_RS06385 SM00388 His Kinase A (phosphoacceptor) domain WS08_RS06390 SM00448 cheY-homologous receiver domain WS08_RS06390 SM00862 Transcriptional regulatory protein, C terminal WS08_RS06425 SM00870 WS08_RS06425 WS08_RS06440 SM00829 Enoylreductase WS08_RS06520 SM00345 helix_turn_helix gluconate operon transcriptional repressor WS08_RS06520 SM00866 WS08_RS06520 WS08_RS06540 SM00831 Cation transporter/ATPase, N-terminus WS08_RS06550 SM00530 Helix-turn-helix XRE-family like proteins WS08_RS06590 SM00062 Bacterial periplasmic substrate-binding proteins WS08_RS06600 SM00382 ATPases associated with a variety of cellular activities WS08_RS06610 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WS08_RS06770 SM00257 Lysin motif WS08_RS06775 SM00641 Glycosyl hydrolases family 25 WS08_RS06780 SM00014 Acid phosphatase homologues WS08_RS06785 SM00530 Helix-turn-helix XRE-family like proteins WS08_RS06790 SM00257 Lysin motif WS08_RS06800 SM00530 Helix-turn-helix XRE-family like proteins