locus-tag	class	description
AUC62_RS00010	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AUC62_RS00030	COG1368	sulfuric ester hydrolase activity
AUC62_RS00035	COG2153	protein acetylation
AUC62_RS00050	COG0187	DNA topoisomerase II activity
AUC62_RS00055	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AUC62_RS00060	COG2501	S4 domain
AUC62_RS00065	COG0592	DNA-directed DNA polymerase activity
AUC62_RS00070	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AUC62_RS00075	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AUC62_RS00080	COG0594	ribonuclease P activity
AUC62_RS00085	COG0706	membrane insertase activity
AUC62_RS00095	COG1120	ATPase activity
AUC62_RS00105	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AUC62_RS00120	COG0569	domain protein
AUC62_RS00125	COG1113	amino acid transport
AUC62_RS00145	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AUC62_RS00155	COG0446	pyridine nucleotide-disulphide oxidoreductase
AUC62_RS00165	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AUC62_RS00170	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AUC62_RS00180	COG1136	(ABC) transporter
AUC62_RS00185	COG0577	efflux transmembrane transporter activity
AUC62_RS00190	COG1033	growth of symbiont in host cell
AUC62_RS00190	COG2409	Drug exporters of the RND superfamily
AUC62_RS00195	COG0561	phosphatase activity
AUC62_RS00205	COG0328	RNA-DNA hybrid ribonuclease activity
AUC62_RS00225	COG3152	Membrane
AUC62_RS00230	COG2252	PERMEase
AUC62_RS00270	COG1881	PFAM PEBP family protein
AUC62_RS00340	COG1476	TRANSCRIPTIONal
AUC62_RS00365	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AUC62_RS00365	COG0517	IMP dehydrogenase activity
AUC62_RS00370	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS00405	COG1744	ABC transporter substrate-binding protein PnrA-like
AUC62_RS00410	COG0137	argininosuccinate synthase activity
AUC62_RS00415	COG0165	Argininosuccinate lyase
AUC62_RS00420	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AUC62_RS00425	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AUC62_RS00435	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AUC62_RS00440	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AUC62_RS00445	COG0505	Belongs to the CarA family
AUC62_RS00450	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AUC62_RS00470	COG1131	(ABC) transporter
AUC62_RS00490	COG0789	Transcriptional regulator
AUC62_RS00505	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AUC62_RS00515	COG0697	spore germination
AUC62_RS00520	COG1744	ABC transporter substrate-binding protein PnrA-like
AUC62_RS00540	COG1846	Transcriptional regulator
AUC62_RS00545	COG1132	(ABC) transporter
AUC62_RS00555	COG0656	L-ascorbic acid biosynthetic process
AUC62_RS00565	COG4619	ABC transporter
AUC62_RS00570	COG0390	transport system, permease component
AUC62_RS00580	COG1131	(ABC) transporter
AUC62_RS00590	COG1126	abc transporter atp-binding protein
AUC62_RS00595	COG0765	amino acid transport
AUC62_RS00600	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUC62_RS00605	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUC62_RS00610	COG1254	Belongs to the acylphosphatase family
AUC62_RS00620	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AUC62_RS00620	COG0392	lysyltransferase activity
AUC62_RS00630	COG0628	permease
AUC62_RS00660	COG1113	amino acid transport
AUC62_RS00685	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AUC62_RS00700	COG2855	membrane
AUC62_RS00705	COG3620	sequence-specific DNA binding
AUC62_RS00715	COG2855	membrane
AUC62_RS00720	COG0583	DNA-binding transcription factor activity
AUC62_RS00730	COG2070	2-Nitropropane dioxygenase
AUC62_RS00745	COG1228	amidohydrolase
AUC62_RS00750	COG0531	amino acid
AUC62_RS00760	COG3223	Belongs to the PsiE family
AUC62_RS00770	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AUC62_RS00780	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AUC62_RS00790	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AUC62_RS00795	COG4166	transmembrane transport
AUC62_RS00800	COG2267	carboxylic ester hydrolase activity
AUC62_RS00805	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AUC62_RS00815	COG0477	Major facilitator Superfamily
AUC62_RS00820	COG4975	Glucose uptake
AUC62_RS00830	COG0531	amino acid
AUC62_RS00835	COG1113	amino acid transport
AUC62_RS00840	COG0531	amino acid
AUC62_RS00845	COG0252	asparaginase activity
AUC62_RS00850	COG4443	Transcriptional Coactivator p15 (PC4)
AUC62_RS00860	COG2226	methyltransferase
AUC62_RS00865	COG1335	isochorismatase
AUC62_RS00870	COG2050	protein possibly involved in aromatic compounds catabolism
AUC62_RS00875	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AUC62_RS00880	COG0318	PFAM AMP-dependent synthetase and ligase
AUC62_RS00895	COG0745	RESPONSE REGULATOR receiver
AUC62_RS00900	COG5002	protein histidine kinase activity
AUC62_RS00940	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AUC62_RS00945	COG1194	a g-specific adenine glycosylase
AUC62_RS00955	COG0357	Ribosomal RNA small subunit methyltransferase G
AUC62_RS00960	COG1192	Involved in chromosome partitioning
AUC62_RS00965	COG1475	DNA binding
AUC62_RS00970	COG4481	Protein conserved in bacteria
AUC62_RS00975	COG0012	GTP binding
AUC62_RS00985	COG0745	RESPONSE REGULATOR receiver
AUC62_RS00995	COG1686	Belongs to the peptidase S11 family
AUC62_RS01050	COG3104	oligopeptide transport
AUC62_RS01055	COG0477	Major facilitator Superfamily
AUC62_RS01060	COG4975	Glucose uptake
AUC62_RS01105	COG3091	SprT-like family
AUC62_RS01110	COG2755	lipolytic protein G-D-S-L family
AUC62_RS01110	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AUC62_RS01125	COG1846	Transcriptional regulator
AUC62_RS01135	COG1121	(ABC) transporter
AUC62_RS01140	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AUC62_RS01145	COG1373	ATPase (AAA superfamily
AUC62_RS01150	COG0488	(ABC) transporter
AUC62_RS01155	COG0534	Mate efflux family protein
AUC62_RS01170	COG3940	Belongs to the glycosyl hydrolase 43 family
AUC62_RS01195	COG2160	L-arabinose isomerase activity
AUC62_RS01200	COG0656	L-ascorbic acid biosynthetic process
AUC62_RS01235	COG0765	amino acid transport
AUC62_RS01265	COG1215	transferase activity, transferring glycosyl groups
AUC62_RS01270	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AUC62_RS01275	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AUC62_RS01290	COG1418	mRNA catabolic process
AUC62_RS01295	COG2814	Major facilitator Superfamily
AUC62_RS01300	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AUC62_RS01305	COG2188	Transcriptional regulator
AUC62_RS01310	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
AUC62_RS01325	COG0463	Glycosyl transferase, family 2
AUC62_RS01325	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AUC62_RS01345	COG1442	glycosyl transferase family 8
AUC62_RS01345	COG1216	Glycosyl transferase, family 2
AUC62_RS01350	COG1215	transferase activity, transferring glycosyl groups
AUC62_RS01355	COG2801	Transposase and inactivated derivatives
AUC62_RS01370	COG5039	Polysaccharide pyruvyl transferase
AUC62_RS01415	COG3590	peptidase
AUC62_RS01420	COG1012	belongs to the aldehyde dehydrogenase family
AUC62_RS01420	COG1454	alcohol dehydrogenase
AUC62_RS01430	COG0708	Exodeoxyribonuclease III
AUC62_RS01450	COG0588	phosphoglycerate mutase activity
AUC62_RS01455	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AUC62_RS01470	COG1132	(ABC) transporter
AUC62_RS01475	COG1132	(ABC) transporter
AUC62_RS01500	COG0110	maltose O-acetyltransferase activity
AUC62_RS01510	COG1482	cell wall glycoprotein biosynthetic process
AUC62_RS01515	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AUC62_RS01520	COG3442	glutamine amidotransferase
AUC62_RS01530	COG1435	thymidine kinase activity
AUC62_RS01535	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AUC62_RS01540	COG2890	protein-(glutamine-N5) methyltransferase activity
AUC62_RS01545	COG0009	L-threonylcarbamoyladenylate synthase
AUC62_RS01550	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AUC62_RS01555	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AUC62_RS01560	COG0702	epimerase
AUC62_RS01570	COG2233	PERMEase
AUC62_RS01575	COG0356	it plays a direct role in the translocation of protons across the membrane
AUC62_RS01580	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AUC62_RS01585	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AUC62_RS01590	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AUC62_RS01595	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AUC62_RS01600	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AUC62_RS01605	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AUC62_RS01610	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AUC62_RS01615	COG1876	peptidase activity
AUC62_RS01620	COG1428	Deoxynucleoside kinase
AUC62_RS01625	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AUC62_RS01650	COG4463	regulation of RNA biosynthetic process
AUC62_RS01655	COG0542	response to heat
AUC62_RS01660	COG0085	RNA polymerase activity
AUC62_RS01675	COG1979	alcohol dehydrogenase
AUC62_RS01690	COG1309	transcriptional regulator
AUC62_RS01695	COG0500	methyltransferase
AUC62_RS01740	COG3620	sequence-specific DNA binding
AUC62_RS01750	COG2807	transmembrane transport
AUC62_RS01760	COG2813	Specifically methylates the guanine in position
AUC62_RS01765	COG0590	tRNA wobble adenosine to inosine editing
AUC62_RS01775	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AUC62_RS01800	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AUC62_RS01805	COG3870	Protein conserved in bacteria
AUC62_RS01825	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AUC62_RS01830	COG1214	PFAM Peptidase M22, glycoprotease
AUC62_RS01835	COG0456	acetyltransferase
AUC62_RS01845	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AUC62_RS01850	COG0142	geranyltranstransferase activity
AUC62_RS01855	COG0051	transcription antitermination factor activity, RNA binding
AUC62_RS01860	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AUC62_RS01870	COG0089	rRNA binding
AUC62_RS01875	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AUC62_RS01880	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AUC62_RS01885	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AUC62_RS01890	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AUC62_RS01895	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AUC62_RS01900	COG0255	Belongs to the universal ribosomal protein uL29 family
AUC62_RS01910	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AUC62_RS01915	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AUC62_RS01920	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AUC62_RS01925	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AUC62_RS01930	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AUC62_RS01935	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AUC62_RS01940	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AUC62_RS01945	COG1841	ribosomal large subunit assembly
AUC62_RS01950	COG0200	Binds to the 23S rRNA
AUC62_RS01965	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AUC62_RS01970	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AUC62_RS01975	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AUC62_RS01980	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AUC62_RS01985	COG0202	RNA polymerase activity
AUC62_RS01990	COG0203	ribosomal protein L17
AUC62_RS02015	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AUC62_RS02030	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AUC62_RS02055	COG0583	DNA-binding transcription factor activity
AUC62_RS02060	COG0114	fumarate hydratase activity
AUC62_RS02065	COG1053	succinate dehydrogenase
AUC62_RS02070	COG0471	metal ion transport
AUC62_RS02075	COG0039	L-malate dehydrogenase activity
AUC62_RS02080	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AUC62_RS02085	COG0215	cysteine-tRNA ligase activity
AUC62_RS02090	COG0626	cystathionine gamma-synthase activity
AUC62_RS02095	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AUC62_RS02100	COG1464	Belongs to the NlpA lipoprotein family
AUC62_RS02105	COG1854	S-ribosylhomocysteine lyase activity
AUC62_RS02110	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AUC62_RS02115	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AUC62_RS02130	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AUC62_RS02135	COG0250	Participates in transcription elongation, termination and antitermination
AUC62_RS02140	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AUC62_RS02145	COG0081	regulation of translation
AUC62_RS02150	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AUC62_RS02155	COG0222	ribosome binding
AUC62_RS02165	COG1121	(ABC) transporter
AUC62_RS02170	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AUC62_RS02175	COG0803	Belongs to the bacterial solute-binding protein 9 family
AUC62_RS02180	COG1252	NADH dehydrogenase
AUC62_RS02190	COG1122	ATPase activity
AUC62_RS02195	COG1122	ATPase activity
AUC62_RS02205	COG0101	tRNA pseudouridine synthase activity
AUC62_RS02210	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AUC62_RS02220	COG4221	oxidoreductase activity
AUC62_RS02240	COG0028	Belongs to the TPP enzyme family
AUC62_RS02250	COG1573	uracil-dna glycosylase
AUC62_RS02265	COG0366	Alpha amylase catalytic
AUC62_RS02275	COG0671	phosphoesterase, PA-phosphatase related
AUC62_RS02285	COG2814	Major facilitator Superfamily
AUC62_RS02290	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AUC62_RS02300	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AUC62_RS02305	COG1481	regulation of sporulation
AUC62_RS02310	COG0740	serine-type endopeptidase activity
AUC62_RS02325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUC62_RS02325	COG1263	PTS System
AUC62_RS02335	COG1914	H( )-stimulated, divalent metal cation uptake system
AUC62_RS02355	COG0039	L-malate dehydrogenase activity
AUC62_RS02360	COG0028	Belongs to the TPP enzyme family
AUC62_RS02365	COG3527	Alpha-acetolactate decarboxylase
AUC62_RS02375	COG3942	CHAP domain
AUC62_RS02375	COG1388	LysM domain
AUC62_RS02380	COG0791	NLP P60 protein
AUC62_RS02390	COG0756	dUTP diphosphatase activity
AUC62_RS02400	COG4956	integral membrane protein (PIN domain superfamily)
AUC62_RS02410	COG0653	protein targeting
AUC62_RS02415	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AUC62_RS02435	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AUC62_RS02445	COG1733	regulation of RNA biosynthetic process
AUC62_RS02450	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AUC62_RS02455	COG0072	phenylalanine-tRNA ligase activity
AUC62_RS02455	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUC62_RS02460	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AUC62_RS02465	COG0514	ATP-dependent DNA helicase (RecQ)
AUC62_RS02470	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AUC62_RS02480	COG0768	penicillin binding
AUC62_RS02485	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AUC62_RS02500	COG1940	carbohydrate kinase activity
AUC62_RS02505	COG5632	N-Acetylmuramoyl-L-alanine amidase
AUC62_RS02505	COG3409	Peptidoglycan-binding domain 1 protein
AUC62_RS02510	COG3942	CHAP domain
AUC62_RS02530	COG0584	glycerophosphoryl diester phosphodiesterase
AUC62_RS02535	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AUC62_RS02540	COG0789	Transcriptional regulator
AUC62_RS02545	COG0174	glutamine synthetase
AUC62_RS02570	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AUC62_RS02575	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AUC62_RS02580	COG1472	Belongs to the glycosyl hydrolase 3 family
AUC62_RS02590	COG1132	(ABC) transporter
AUC62_RS02595	COG0778	Nitroreductase
AUC62_RS02600	COG1169	isochorismate synthase
AUC62_RS02605	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AUC62_RS02610	COG0596	Alpha beta hydrolase
AUC62_RS02615	COG4948	Mandelate Racemase Muconate Lactonizing
AUC62_RS02635	COG0737	Belongs to the 5'-nucleotidase family
AUC62_RS02640	COG4470	Protein conserved in bacteria
AUC62_RS02645	COG0647	UMP catabolic process
AUC62_RS02650	COG4166	transmembrane transport
AUC62_RS02655	COG0673	inositol 2-dehydrogenase activity
AUC62_RS02680	COG0573	inorganic phosphate transmembrane transporter activity
AUC62_RS02685	COG0581	inorganic phosphate transmembrane transporter activity
AUC62_RS02690	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AUC62_RS02695	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AUC62_RS02700	COG0704	Plays a role in the regulation of phosphate uptake
AUC62_RS02705	COG2137	regulation of response to DNA damage stimulus
AUC62_RS02730	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AUC62_RS02740	COG5506	Protein of unknown function (DUF1694)
AUC62_RS02750	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AUC62_RS02860	COG1272	protein, Hemolysin III
AUC62_RS02895	COG0525	valine-tRNA ligase activity
AUC62_RS02905	COG0285	dihydrofolate synthase activity
AUC62_RS02925	COG0488	(ABC) transporter
AUC62_RS02930	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AUC62_RS02935	COG0459	protein refolding
AUC62_RS02940	COG0531	amino acid
AUC62_RS02950	COG1181	Belongs to the D-alanine--D-alanine ligase family
AUC62_RS02955	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AUC62_RS02960	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AUC62_RS02970	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AUC62_RS02975	COG1713	HD superfamily hydrolase involved in NAD metabolism
AUC62_RS02980	COG0799	negative regulation of ribosome biogenesis
AUC62_RS02985	COG2226	methyltransferase
AUC62_RS02990	COG1323	Belongs to the UPF0348 family
AUC62_RS03000	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AUC62_RS03005	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AUC62_RS03095	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AUC62_RS03105	COG0363	glucosamine-6-phosphate deaminase activity
AUC62_RS03110	COG0776	regulation of translation
AUC62_RS03120	COG0577	efflux transmembrane transporter activity
AUC62_RS03125	COG1136	(ABC) transporter
AUC62_RS03140	COG4720	Psort location CytoplasmicMembrane, score
AUC62_RS03145	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AUC62_RS03150	COG1570	exodeoxyribonuclease VII activity
AUC62_RS03160	COG0142	geranyltranstransferase activity
AUC62_RS03165	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AUC62_RS03170	COG1438	arginine binding
AUC62_RS03175	COG0497	DNA recombination
AUC62_RS03185	COG0194	GDP metabolic process
AUC62_RS03195	COG0586	Pfam SNARE associated Golgi protein
AUC62_RS03200	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AUC62_RS03205	COG1098	S1 RNA binding domain
AUC62_RS03320	COG4684	Psort location CytoplasmicMembrane, score
AUC62_RS03325	COG1271	oxidase subunit
AUC62_RS03330	COG1294	oxidase, subunit
AUC62_RS03335	COG4988	ABC transporter
AUC62_RS03340	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AUC62_RS03345	COG1705	Flagellar rod assembly protein muramidase FlgJ
AUC62_RS03345	COG1388	LysM domain
AUC62_RS03350	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AUC62_RS03365	COG1278	Cold shock
AUC62_RS03370	COG0494	nUDIX hydrolase
AUC62_RS03380	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AUC62_RS03385	COG0346	lactoylglutathione lyase activity
AUC62_RS03390	COG0400	carboxylic ester hydrolase activity
AUC62_RS03400	COG0741	lytic transglycosylase activity
AUC62_RS03420	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AUC62_RS03425	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUC62_RS03430	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AUC62_RS03440	COG4120	Belongs to the binding-protein-dependent transport system permease family
AUC62_RS03450	COG0038	chloride channel
AUC62_RS03455	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AUC62_RS03460	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AUC62_RS03465	COG1307	EDD domain protein, DegV family
AUC62_RS03470	COG2190	(PTS) system
AUC62_RS03470	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUC62_RS03470	COG1263	PTS System
AUC62_RS03485	COG2003	Belongs to the UPF0758 family
AUC62_RS03490	COG1077	Cell shape determining protein MreB Mrl
AUC62_RS03500	COG3338	carbonate dehydratase activity
AUC62_RS03510	COG0765	amino acid transport
AUC62_RS03515	COG1126	abc transporter atp-binding protein
AUC62_RS03520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUC62_RS03525	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AUC62_RS03525	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AUC62_RS03530	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AUC62_RS03535	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AUC62_RS03540	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AUC62_RS03555	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AUC62_RS03565	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AUC62_RS03570	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AUC62_RS03575	COG0138	bifunctional purine biosynthesis protein purh
AUC62_RS03580	COG0151	Belongs to the GarS family
AUC62_RS03585	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AUC62_RS03600	COG0446	pyridine nucleotide-disulphide oxidoreductase
AUC62_RS03615	COG0833	amino acid
AUC62_RS03625	COG2264	protein methyltransferase activity
AUC62_RS03630	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AUC62_RS03640	COG2001	Belongs to the MraZ family
AUC62_RS03645	COG0275	rRNA processing
AUC62_RS03655	COG0768	penicillin binding
AUC62_RS03660	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AUC62_RS03665	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AUC62_RS03670	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AUC62_RS03675	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AUC62_RS03680	COG0849	cell division
AUC62_RS03690	COG1799	cell septum assembly
AUC62_RS03705	COG3599	regulation of cell shape
AUC62_RS03725	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AUC62_RS03730	COG0217	transcriptional regulatory protein
AUC62_RS03735	COG2252	PERMEase
AUC62_RS03740	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AUC62_RS03780	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AUC62_RS03785	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AUC62_RS03790	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AUC62_RS03795	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AUC62_RS03795	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AUC62_RS03800	COG0631	protein serine/threonine phosphatase activity
AUC62_RS03805	COG2815	serine threonine protein kinase
AUC62_RS03805	COG0515	serine threonine protein kinase
AUC62_RS03810	COG1162	GTPase activity
AUC62_RS03815	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AUC62_RS03825	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AUC62_RS03835	COG1461	Dihydroxyacetone kinase
AUC62_RS03850	COG0438	transferase activity, transferring glycosyl groups
AUC62_RS03860	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AUC62_RS03865	COG0416	fatty acid biosynthetic process
AUC62_RS03870	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUC62_RS03875	COG0571	ribonuclease III activity
AUC62_RS03880	COG1196	nuclear chromosome segregation
AUC62_RS03885	COG0552	protein localization to endoplasmic reticulum
AUC62_RS03890	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AUC62_RS03895	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AUC62_RS03910	COG0228	four-way junction DNA binding
AUC62_RS03925	COG0588	phosphoglycerate mutase activity
AUC62_RS03930	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AUC62_RS03935	COG0336	Belongs to the RNA methyltransferase TrmD family
AUC62_RS03940	COG0335	large ribosomal subunit rRNA binding
AUC62_RS03950	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUC62_RS03955	COG1942	4-Oxalocrotonate Tautomerase
AUC62_RS03960	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AUC62_RS03970	COG1428	Deoxynucleoside kinase
AUC62_RS03975	COG1970	mechanosensitive ion channel activity
AUC62_RS03980	COG0561	phosphatase activity
AUC62_RS04045	COG3853	Toxic anion resistance protein (TelA)
AUC62_RS04050	COG1393	Belongs to the ArsC family
AUC62_RS04055	COG4862	establishment of competence for transformation
AUC62_RS04060	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS04065	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUC62_RS04070	COG1447	Phosphotransferase system cellobiose-specific component IIA
AUC62_RS04075	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS04080	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUC62_RS04090	COG1164	Oligoendopeptidase f
AUC62_RS04095	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AUC62_RS04110	COG1609	Transcriptional regulator
AUC62_RS04115	COG0006	proline dipeptidase activity
AUC62_RS04185	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AUC62_RS04190	COG3425	synthase
AUC62_RS04205	COG0860	N-Acetylmuramoyl-L-alanine amidase
AUC62_RS04210	COG0124	histidyl-tRNA synthetase
AUC62_RS04215	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AUC62_RS04225	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUC62_RS04230	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AUC62_RS04235	COG1610	YqeY-like protein
AUC62_RS04240	COG1702	phosphate starvation-inducible protein PhoH
AUC62_RS04245	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AUC62_RS04250	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AUC62_RS04255	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AUC62_RS04260	COG1381	Involved in DNA repair and RecF pathway recombination
AUC62_RS04270	COG0752	glycyl-tRNA synthetase alpha subunit
AUC62_RS04275	COG0751	glycine-tRNA ligase activity
AUC62_RS04295	COG2706	6-phosphogluconolactonase activity
AUC62_RS04300	COG0628	permease
AUC62_RS04310	COG1674	ftsk spoiiie
AUC62_RS04320	COG4152	abc transporter atp-binding protein
AUC62_RS04325	COG1668	transmembrane transport
AUC62_RS04335	COG0322	excinuclease ABC activity
AUC62_RS04340	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AUC62_RS04345	COG1739	Uncharacterized protein family UPF0029
AUC62_RS04360	COG0517	IMP dehydrogenase activity
AUC62_RS04360	COG0516	GMP reductase activity
AUC62_RS04365	COG0516	GMP reductase activity
AUC62_RS04365	COG0517	IMP dehydrogenase activity
AUC62_RS04370	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AUC62_RS04375	COG0632	four-way junction helicase activity
AUC62_RS04380	COG2255	four-way junction helicase activity
AUC62_RS04385	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AUC62_RS04420	COG0343	queuine tRNA-ribosyltransferase activity
AUC62_RS04425	COG1862	Preprotein translocase
AUC62_RS04430	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AUC62_RS04435	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AUC62_RS04440	COG0513	Belongs to the DEAD box helicase family
AUC62_RS04450	COG1929	Belongs to the glycerate kinase type-1 family
AUC62_RS04455	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AUC62_RS04475	COG3906	Belongs to the UPF0473 family
AUC62_RS04485	COG0658	competence protein
AUC62_RS04485	COG2333	competence protein COMEC
AUC62_RS04490	COG1466	dna polymerase III delta subunit
AUC62_RS04495	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AUC62_RS04500	COG0268	Binds directly to 16S ribosomal RNA
AUC62_RS04525	COG0544	peptidyl-prolyl cis-trans isomerase activity
AUC62_RS04530	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AUC62_RS04535	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AUC62_RS04555	COG1193	negative regulation of DNA recombination
AUC62_RS04575	COG3118	belongs to the thioredoxin family
AUC62_RS04580	COG0187	DNA topoisomerase II activity
AUC62_RS04585	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AUC62_RS04590	COG3527	Alpha-acetolactate decarboxylase
AUC62_RS04600	COG1473	amidohydrolase
AUC62_RS04615	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AUC62_RS04635	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AUC62_RS04640	COG3201	nicotinamide mononucleotide transporter
AUC62_RS04685	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AUC62_RS04690	COG0248	Ppx GppA phosphatase
AUC62_RS04695	COG3321	synthase
AUC62_RS04695	COG0604	alcohol dehydrogenase
AUC62_RS04715	COG2801	Transposase and inactivated derivatives
AUC62_RS04770	COG2801	Transposase and inactivated derivatives
AUC62_RS04800	COG0277	FAD linked oxidase domain protein
AUC62_RS04805	COG0436	Aminotransferase
AUC62_RS04820	COG1464	Belongs to the NlpA lipoprotein family
AUC62_RS04830	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AUC62_RS04835	COG0351	phosphomethylpyrimidine kinase
AUC62_RS04840	COG0352	thiamine-phosphate diphosphorylase activity
AUC62_RS04860	COG1028	Short-chain dehydrogenase reductase Sdr
AUC62_RS04870	COG1940	carbohydrate kinase activity
AUC62_RS04950	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AUC62_RS04955	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AUC62_RS04970	COG2357	RelA SpoT domain protein
AUC62_RS04975	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AUC62_RS04980	COG0564	pseudouridine synthase activity
AUC62_RS04985	COG2239	Acts as a magnesium transporter
AUC62_RS04990	COG2814	Major facilitator Superfamily
AUC62_RS05005	COG0488	(ABC) transporter
AUC62_RS05010	COG0488	(ABC) transporter
AUC62_RS05045	COG0583	DNA-binding transcription factor activity
AUC62_RS05055	COG0656	L-ascorbic acid biosynthetic process
AUC62_RS05060	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AUC62_RS05070	COG1846	Transcriptional regulator
AUC62_RS05125	COG0384	phenazine biosynthesis protein PhzF
AUC62_RS05135	COG1621	beta-fructofuranosidase activity
AUC62_RS05140	COG4684	Psort location CytoplasmicMembrane, score
AUC62_RS05145	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AUC62_RS05150	COG0287	Prephenate dehydrogenase
AUC62_RS05160	COG0738	Major facilitator superfamily
AUC62_RS05165	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AUC62_RS05185	COG1304	FMN binding
AUC62_RS05200	COG0779	Required for maturation of 30S ribosomal subunits
AUC62_RS05205	COG0195	Participates in both transcription termination and antitermination
AUC62_RS05210	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AUC62_RS05220	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AUC62_RS05225	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AUC62_RS05230	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AUC62_RS05235	COG1252	NADH dehydrogenase
AUC62_RS05245	COG0196	riboflavin kinase activity
AUC62_RS05250	COG1293	RNA-binding protein homologous to eukaryotic snRNP
AUC62_RS05255	COG3142	Participates in the control of copper homeostasis
AUC62_RS05270	COG2270	Major facilitator Superfamily
AUC62_RS05275	COG1307	EDD domain protein, DegV family
AUC62_RS05280	COG1307	EDD domain protein, DegV family
AUC62_RS05285	COG2755	lipolytic protein G-D-S-L family
AUC62_RS05295	COG4479	Belongs to the UPF0346 family
AUC62_RS05305	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AUC62_RS05310	COG0758	DNA mediated transformation
AUC62_RS05315	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AUC62_RS05320	COG4974	Belongs to the 'phage' integrase family
AUC62_RS05330	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AUC62_RS05350	COG3448	diguanylate cyclase activity
AUC62_RS05350	COG4175	Glycine betaine
AUC62_RS05360	COG0446	pyridine nucleotide-disulphide oxidoreductase
AUC62_RS05365	COG1464	Belongs to the NlpA lipoprotein family
AUC62_RS05370	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AUC62_RS05375	COG1597	lipid kinase activity
AUC62_RS05380	COG1011	Hydrolase
AUC62_RS05400	COG5503	Protein of unknown function (DUF1447)
AUC62_RS05415	COG0242	peptide deformylase activity
AUC62_RS05420	COG4476	Belongs to the UPF0223 family
AUC62_RS05425	COG0483	inositol monophosphate 1-phosphatase activity
AUC62_RS05430	COG1217	gtp-binding protein TYPA
AUC62_RS05435	COG0772	Belongs to the SEDS family
AUC62_RS05440	COG4471	UPF0298 protein
AUC62_RS05445	COG0742	ribosomal rna small subunit methyltransferase
AUC62_RS05450	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AUC62_RS05455	COG3480	Lon protease (S16) C-terminal proteolytic domain
AUC62_RS05460	COG0477	Major facilitator Superfamily
AUC62_RS05470	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AUC62_RS05475	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AUC62_RS05480	COG0358	DNA primase activity
AUC62_RS05485	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AUC62_RS05515	COG0745	RESPONSE REGULATOR receiver
AUC62_RS05520	COG5002	protein histidine kinase activity
AUC62_RS05525	COG0572	uridine kinase
AUC62_RS05530	COG1363	Peptidase, m42
AUC62_RS05535	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUC62_RS05545	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AUC62_RS05550	COG0670	Belongs to the BI1 family
AUC62_RS05555	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AUC62_RS05555	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AUC62_RS05560	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AUC62_RS05565	COG0237	dephospho-CoA kinase activity
AUC62_RS05575	COG1484	DNA-dependent DNA replication
AUC62_RS05590	COG0745	RESPONSE REGULATOR receiver
AUC62_RS05595	COG5002	protein histidine kinase activity
AUC62_RS05605	COG3942	CHAP domain
AUC62_RS05605	COG1705	Flagellar rod assembly protein muramidase FlgJ
AUC62_RS05630	COG0706	membrane insertase activity
AUC62_RS05635	COG1028	Short-chain dehydrogenase reductase Sdr
AUC62_RS05640	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUC62_RS05650	COG1304	FMN binding
AUC62_RS05670	COG1199	ATP-dependent helicase activity
AUC62_RS05670	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AUC62_RS05680	COG0017	Asparaginyl-tRNA synthetase
AUC62_RS05685	COG3935	DnaD domain protein
AUC62_RS05695	COG3331	DNA recombination
AUC62_RS05700	COG4474	Belongs to the UPF0398 family
AUC62_RS05705	COG3599	regulation of cell shape
AUC62_RS05715	COG0116	Belongs to the methyltransferase superfamily
AUC62_RS05725	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AUC62_RS05745	COG0556	nucleotide-excision repair
AUC62_RS05755	COG0439	Biotin carboxylase
AUC62_RS05760	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AUC62_RS05770	COG3104	oligopeptide transport
AUC62_RS05775	COG0363	glucosamine-6-phosphate deaminase activity
AUC62_RS05785	COG0537	adenosine 5'-monophosphoramidase activity
AUC62_RS05790	COG1131	(ABC) transporter
AUC62_RS05800	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AUC62_RS05805	COG1719	4-vinyl reductase, 4VR
AUC62_RS05810	COG1397	ADP-ribosylglycohydrolase
AUC62_RS05840	COG0446	pyridine nucleotide-disulphide oxidoreductase
AUC62_RS05845	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
AUC62_RS05850	COG1349	DNA-binding transcription factor activity
AUC62_RS05855	COG1105	Belongs to the carbohydrate kinase PfkB family
AUC62_RS05860	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AUC62_RS05860	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUC62_RS05860	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AUC62_RS05870	COG1609	Transcriptional regulator
AUC62_RS05880	COG0306	phosphate transporter
AUC62_RS05890	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AUC62_RS05900	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS05920	COG0531	amino acid
AUC62_RS05930	COG0481	GTPase activity
AUC62_RS05960	COG1028	Short-chain dehydrogenase reductase Sdr
AUC62_RS05965	COG4708	membrane
AUC62_RS05975	COG0531	amino acid
AUC62_RS05980	COG4221	oxidoreductase activity
AUC62_RS05985	COG0583	DNA-binding transcription factor activity
AUC62_RS05990	COG0281	malic enzyme
AUC62_RS06000	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AUC62_RS06015	COG1136	(ABC) transporter
AUC62_RS06020	COG0577	efflux transmembrane transporter activity
AUC62_RS06030	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AUC62_RS06040	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AUC62_RS06045	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AUC62_RS06075	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AUC62_RS06080	COG2384	SAM-dependent methyltransferase
AUC62_RS06085	COG0071	Belongs to the small heat shock protein (HSP20) family
AUC62_RS06090	COG0457	Tetratricopeptide repeat
AUC62_RS06125	COG0419	ATPase involved in DNA repair
AUC62_RS06130	COG0420	3'-5' exonuclease activity
AUC62_RS06140	COG2807	transmembrane transport
AUC62_RS06145	COG4720	Psort location CytoplasmicMembrane, score
AUC62_RS06150	COG0351	phosphomethylpyrimidine kinase
AUC62_RS06160	COG1160	GTP binding
AUC62_RS06165	COG0539	negative regulation of cytoplasmic translation
AUC62_RS06170	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AUC62_RS06180	COG0514	ATP-dependent DNA helicase (RecQ)
AUC62_RS06190	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AUC62_RS06205	COG1187	pseudouridine synthase activity
AUC62_RS06210	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AUC62_RS06215	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AUC62_RS06230	COG2996	Protein conserved in bacteria
AUC62_RS06240	COG0475	glutathione-regulated potassium exporter activity
AUC62_RS06250	COG1490	D-aminoacyl-tRNA deacylase activity
AUC62_RS06255	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AUC62_RS06260	COG0587	DNA-directed DNA polymerase activity
AUC62_RS06270	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AUC62_RS06275	COG0488	(ABC) transporter
AUC62_RS06280	COG0617	tRNA 3'-terminal CCA addition
AUC62_RS06300	COG1266	CAAX protease self-immunity
AUC62_RS06305	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AUC62_RS06310	COG0004	ammonium transporteR
AUC62_RS06320	COG0366	Alpha amylase catalytic
AUC62_RS06320	COG5263	repeat protein
AUC62_RS06325	COG1316	TRANSCRIPTIONal
AUC62_RS06330	COG1216	Glycosyl transferase, family 2
AUC62_RS06345	COG1216	Glycosyl transferase, family 2
AUC62_RS06355	COG0438	transferase activity, transferring glycosyl groups
AUC62_RS06360	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AUC62_RS06365	COG0489	protein tyrosine kinase activity
AUC62_RS06380	COG0233	cytoplasmic translational termination
AUC62_RS06390	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AUC62_RS06395	COG0052	Belongs to the universal ribosomal protein uS2 family
AUC62_RS06400	COG2827	Endonuclease containing a URI domain
AUC62_RS06405	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AUC62_RS06410	COG0204	Acyl-transferase
AUC62_RS06415	COG3883	PFAM NLP P60 protein
AUC62_RS06415	COG0791	NLP P60 protein
AUC62_RS06430	COG3763	UPF0154 protein
AUC62_RS06435	COG4224	UPF0291 protein
AUC62_RS06440	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AUC62_RS06460	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AUC62_RS06460	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AUC62_RS06465	COG1234	tRNA 3'-trailer cleavage
AUC62_RS06480	COG0484	heat shock protein binding
AUC62_RS06485	COG0443	Heat shock 70 kDa protein
AUC62_RS06495	COG1420	regulation of RNA biosynthetic process
AUC62_RS06525	COG1216	Glycosyl transferase, family 2
AUC62_RS06535	COG0463	Glycosyl transferase, family 2
AUC62_RS06545	COG1705	Flagellar rod assembly protein muramidase FlgJ
AUC62_RS06560	COG0562	UDP-galactopyranose mutase
AUC62_RS06585	COG0024	Methionine aminopeptidase
AUC62_RS06615	COG2801	Transposase and inactivated derivatives
AUC62_RS06650	COG2309	aminopeptidase activity
AUC62_RS06665	COG0564	pseudouridine synthase activity
AUC62_RS06670	COG1278	Cold shock
AUC62_RS06680	COG2814	Major facilitator Superfamily
AUC62_RS06685	COG0741	lytic transglycosylase activity
AUC62_RS06695	COG3973	AAA domain
AUC62_RS06705	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AUC62_RS06710	COG1058	Belongs to the CinA family
AUC62_RS06710	COG1546	Belongs to the CinA family
AUC62_RS06715	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AUC62_RS06720	COG1426	Protein conserved in bacteria
AUC62_RS06725	COG0612	Peptidase, M16
AUC62_RS06730	COG0612	Peptidase, M16
AUC62_RS06745	COG0028	Belongs to the TPP enzyme family
AUC62_RS06765	COG4717	serine-type aminopeptidase activity
AUC62_RS06780	COG3679	Belongs to the UPF0342 family
AUC62_RS06785	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AUC62_RS06790	COG1438	arginine binding
AUC62_RS06820	COG1959	2 iron, 2 sulfur cluster binding
AUC62_RS06845	COG0018	arginyl-trna synthetase
AUC62_RS06860	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AUC62_RS06870	COG1121	(ABC) transporter
AUC62_RS06890	COG1597	lipid kinase activity
AUC62_RS06895	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AUC62_RS06900	COG0154	amidase activity
AUC62_RS06905	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AUC62_RS06910	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AUC62_RS06910	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AUC62_RS06920	COG2936	dipeptidyl-peptidase activity
AUC62_RS06935	COG1695	Transcriptional regulator
AUC62_RS06945	COG1914	H( )-stimulated, divalent metal cation uptake system
AUC62_RS06965	COG0667	Aldo Keto reductase
AUC62_RS06970	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AUC62_RS06975	COG4721	ABC-type cobalt transport system, permease component
AUC62_RS06980	COG1122	ATPase activity
AUC62_RS06995	COG0758	DNA mediated transformation
AUC62_RS07010	COG0710	3-dehydroquinate dehydratase activity
AUC62_RS07015	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AUC62_RS07020	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AUC62_RS07025	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AUC62_RS07030	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AUC62_RS07035	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AUC62_RS07040	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AUC62_RS07055	COG4684	Psort location CytoplasmicMembrane, score
AUC62_RS07060	COG0436	Aminotransferase
AUC62_RS07080	COG2801	Transposase and inactivated derivatives
AUC62_RS07095	COG1783	phage Terminase large subunit
AUC62_RS07235	COG1396	sequence-specific DNA binding
AUC62_RS07270	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AUC62_RS07275	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AUC62_RS07280	COG0436	Aminotransferase
AUC62_RS07285	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AUC62_RS07290	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AUC62_RS07300	COG2171	N-acyltransferase activity
AUC62_RS07310	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AUC62_RS07315	COG0527	aspartate kinase activity
AUC62_RS07325	COG1609	Transcriptional regulator
AUC62_RS07330	COG0083	homoserine kinase activity
AUC62_RS07345	COG1321	iron dependent repressor
AUC62_RS07350	COG3764	Sortase (surface protein transpeptidase)
AUC62_RS07370	COG0513	Belongs to the DEAD box helicase family
AUC62_RS07375	COG0673	inositol 2-dehydrogenase activity
AUC62_RS07380	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AUC62_RS07390	COG0501	Belongs to the peptidase M48B family
AUC62_RS07395	COG1704	LemA family
AUC62_RS07405	COG4115	mRNA cleavage
AUC62_RS07410	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AUC62_RS07425	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AUC62_RS07435	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AUC62_RS07440	COG0439	Biotin carboxylase
AUC62_RS07455	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AUC62_RS07460	COG1028	Short-chain dehydrogenase reductase Sdr
AUC62_RS07465	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AUC62_RS07470	COG2070	2-Nitropropane dioxygenase
AUC62_RS07475	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AUC62_RS07480	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUC62_RS07485	COG1846	Transcriptional regulator
AUC62_RS07490	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AUC62_RS07500	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AUC62_RS07505	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AUC62_RS07515	COG0505	Belongs to the CarA family
AUC62_RS07525	COG0564	pseudouridine synthase activity
AUC62_RS07535	COG0328	RNA-DNA hybrid ribonuclease activity
AUC62_RS07540	COG1757	Na H antiporter
AUC62_RS07545	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AUC62_RS07550	COG1113	amino acid transport
AUC62_RS07575	COG0656	L-ascorbic acid biosynthetic process
AUC62_RS07585	COG1454	alcohol dehydrogenase
AUC62_RS07585	COG1012	belongs to the aldehyde dehydrogenase family
AUC62_RS07590	COG0105	UTP biosynthetic process
AUC62_RS07600	COG0583	DNA-binding transcription factor activity
AUC62_RS07605	COG0126	phosphoglycerate kinase activity
AUC62_RS07655	COG0588	phosphoglycerate mutase activity
AUC62_RS07665	COG3716	PTS system mannose fructose sorbose family IID component
AUC62_RS07670	COG3715	PTS system
AUC62_RS07685	COG1397	ADP-ribosylglycohydrolase
AUC62_RS07745	COG1368	sulfuric ester hydrolase activity
AUC62_RS07760	COG0438	transferase activity, transferring glycosyl groups
AUC62_RS07765	COG0438	transferase activity, transferring glycosyl groups
AUC62_RS07770	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AUC62_RS07775	COG0284	orotidine-5'-phosphate decarboxylase activity
AUC62_RS07780	COG0167	dihydroorotate dehydrogenase activity
AUC62_RS07785	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AUC62_RS07790	COG0505	Belongs to the CarA family
AUC62_RS07795	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AUC62_RS07800	COG0540	Belongs to the ATCase OTCase family
AUC62_RS07820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AUC62_RS07825	COG4856	YbbR-like protein
AUC62_RS07840	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AUC62_RS07855	COG0802	atpase or kinase
AUC62_RS07860	COG0280	phosphate acetyltransferase
AUC62_RS07865	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AUC62_RS07875	COG2076	Multidrug Resistance protein
AUC62_RS07880	COG2076	Multidrug Resistance protein
AUC62_RS07885	COG1126	abc transporter atp-binding protein
AUC62_RS07890	COG0765	amino acid transport
AUC62_RS07895	COG2814	Major facilitator Superfamily
AUC62_RS07910	COG0557	exoribonuclease II activity
AUC62_RS07920	COG2814	Major facilitator Superfamily
AUC62_RS07925	COG0154	amidase activity
AUC62_RS07945	COG0149	triose-phosphate isomerase activity
AUC62_RS07950	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AUC62_RS07955	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AUC62_RS07965	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AUC62_RS07970	COG0492	ferredoxin-NADP+ reductase activity
AUC62_RS07995	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AUC62_RS08000	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AUC62_RS08005	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AUC62_RS08010	COG1950	PFAM Membrane protein of
AUC62_RS08020	COG0589	response to stress
AUC62_RS08030	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AUC62_RS08040	COG1177	transmembrane transport
AUC62_RS08050	COG3842	ATPase activity
AUC62_RS08060	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AUC62_RS08065	COG0049	tRNA binding
AUC62_RS08070	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AUC62_RS08080	COG4608	Belongs to the ABC transporter superfamily
AUC62_RS08085	COG0444	Belongs to the ABC transporter superfamily
AUC62_RS08090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AUC62_RS08095	COG0601	transmembrane transport
AUC62_RS08105	COG0460	homoserine dehydrogenase
AUC62_RS08110	COG0626	cystathionine gamma-synthase activity
AUC62_RS08115	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AUC62_RS08125	COG1744	ABC transporter substrate-binding protein PnrA-like
AUC62_RS08130	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AUC62_RS08135	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AUC62_RS08150	COG1302	Protein conserved in bacteria
AUC62_RS08155	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AUC62_RS08165	COG2017	converts alpha-aldose to the beta-anomer
AUC62_RS08175	COG4975	Glucose uptake
AUC62_RS08180	COG3850	Histidine kinase
AUC62_RS08180	COG5002	protein histidine kinase activity
AUC62_RS08185	COG0745	RESPONSE REGULATOR receiver
AUC62_RS08190	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AUC62_RS08195	COG0402	S-adenosylhomocysteine deaminase activity
AUC62_RS08200	COG0673	inositol 2-dehydrogenase activity
AUC62_RS08205	COG0741	lytic transglycosylase activity
AUC62_RS08225	COG0668	transmembrane transport
AUC62_RS08235	COG1126	abc transporter atp-binding protein
AUC62_RS08270	COG0516	GMP reductase activity
AUC62_RS08340	COG2801	Transposase and inactivated derivatives
AUC62_RS08355	COG0494	nUDIX hydrolase
AUC62_RS08390	COG0738	Major facilitator superfamily
AUC62_RS08395	COG1869	D-ribose catabolic process
AUC62_RS08400	COG1609	Transcriptional regulator
AUC62_RS08420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AUC62_RS08435	COG1609	Transcriptional regulator
AUC62_RS08455	COG2223	nitrite transmembrane transporter activity
AUC62_RS08465	COG0318	PFAM AMP-dependent synthetase and ligase
AUC62_RS08475	COG1116	anion transmembrane transporter activity
AUC62_RS08480	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AUC62_RS08490	COG0285	dihydrofolate synthase activity
AUC62_RS08495	COG0302	gtp cyclohydrolase
AUC62_RS08500	COG0302	gtp cyclohydrolase
AUC62_RS08500	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AUC62_RS08540	COG0561	phosphatase activity
AUC62_RS08555	COG4946	Tricorn protease homolog
AUC62_RS08555	COG1506	peptidase
AUC62_RS08555	COG0823	Involved in the tonB-independent uptake of proteins
AUC62_RS08560	COG1464	Belongs to the NlpA lipoprotein family
AUC62_RS08565	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AUC62_RS08570	COG0800	Aldolase
AUC62_RS08575	COG1904	glucuronate isomerase
AUC62_RS08580	COG1312	Catalyzes the dehydration of D-mannonate
AUC62_RS08585	COG0246	Mannitol dehydrogenase
AUC62_RS08600	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AUC62_RS08615	COG1609	Transcriptional regulator
AUC62_RS08645	COG0577	efflux transmembrane transporter activity
AUC62_RS08650	COG1136	(ABC) transporter
AUC62_RS08655	COG3759	membrane
AUC62_RS08680	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AUC62_RS08685	COG2235	arginine
AUC62_RS08695	COG2217	Heavy metal translocating P-type atpase
AUC62_RS08745	COG0438	transferase activity, transferring glycosyl groups
AUC62_RS08790	COG2814	Major facilitator Superfamily
AUC62_RS08795	COG2217	Heavy metal translocating P-type atpase
AUC62_RS08815	COG1309	transcriptional regulator
AUC62_RS08885	COG3711	transcriptional antiterminator
AUC62_RS08890	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS08895	COG1940	carbohydrate kinase activity
AUC62_RS08920	COG2183	response to ionizing radiation
AUC62_RS08930	COG2873	o-acetylhomoserine
AUC62_RS08935	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AUC62_RS08940	COG1040	competence protein
AUC62_RS08945	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AUC62_RS09025	COG2176	DNA-directed DNA polymerase activity
AUC62_RS09030	COG0442	prolyl-tRNA aminoacylation
AUC62_RS09035	COG0750	zinc metalloprotease
AUC62_RS09040	COG4589	Belongs to the CDS family
AUC62_RS09045	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AUC62_RS09050	COG0561	phosphatase activity
AUC62_RS09055	COG2246	polysaccharide biosynthetic process
AUC62_RS09080	COG1811	Na channel or pump
AUC62_RS09085	COG1979	alcohol dehydrogenase
AUC62_RS09095	COG1174	glycine betaine transport
AUC62_RS09115	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AUC62_RS09120	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AUC62_RS09120	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AUC62_RS09125	COG0307	riboflavin synthase, alpha
AUC62_RS09135	COG2076	Multidrug Resistance protein
AUC62_RS09140	COG2076	Multidrug Resistance protein
AUC62_RS09145	COG1435	thymidine kinase activity
AUC62_RS09160	COG1307	EDD domain protein, DegV family
AUC62_RS09165	COG0656	L-ascorbic acid biosynthetic process
AUC62_RS09170	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AUC62_RS09175	COG2814	Major facilitator Superfamily
AUC62_RS09190	COG1228	amidohydrolase
AUC62_RS09195	COG4166	transmembrane transport
AUC62_RS09200	COG0604	alcohol dehydrogenase
AUC62_RS09240	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AUC62_RS09245	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AUC62_RS09255	COG2252	PERMEase
AUC62_RS09265	COG0352	thiamine-phosphate diphosphorylase activity
AUC62_RS09270	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AUC62_RS09280	COG2814	Major facilitator Superfamily
AUC62_RS09285	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AUC62_RS09295	COG2188	Transcriptional regulator
AUC62_RS09305	COG1136	(ABC) transporter
AUC62_RS09305	COG0577	efflux transmembrane transporter activity
AUC62_RS09315	COG0561	phosphatase activity
AUC62_RS09320	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AUC62_RS09320	COG2169	Transcriptional regulator
AUC62_RS09325	COG0561	phosphatase activity
AUC62_RS09345	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AUC62_RS09350	COG0772	Belongs to the SEDS family
AUC62_RS09360	COG1077	Cell shape determining protein MreB Mrl
AUC62_RS09365	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AUC62_RS09370	COG1079	Belongs to the binding-protein-dependent transport system permease family
AUC62_RS09375	COG4603	Belongs to the binding-protein-dependent transport system permease family
AUC62_RS09380	COG3845	ABC transporter
AUC62_RS09385	COG1744	ABC transporter substrate-binding protein PnrA-like
AUC62_RS09390	COG0446	pyridine nucleotide-disulphide oxidoreductase
AUC62_RS09400	COG0640	Transcriptional regulator
AUC62_RS09405	COG0628	permease
AUC62_RS09410	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AUC62_RS09430	COG0386	Belongs to the glutathione peroxidase family
AUC62_RS09435	COG0588	phosphoglycerate mutase activity
AUC62_RS09450	COG0492	ferredoxin-NADP+ reductase activity
AUC62_RS09465	COG1744	ABC transporter substrate-binding protein PnrA-like
AUC62_RS09470	COG1744	ABC transporter substrate-binding protein PnrA-like
AUC62_RS09480	COG2832	Protein of unknown function (DUF454)
AUC62_RS09505	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AUC62_RS09515	COG2814	Major facilitator Superfamily
AUC62_RS09520	COG0305	Participates in initiation and elongation during chromosome replication
AUC62_RS09525	COG0359	binds to the 23S rRNA
AUC62_RS09535	COG4608	Belongs to the ABC transporter superfamily
AUC62_RS09540	COG0444	Belongs to the ABC transporter superfamily
AUC62_RS09545	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AUC62_RS09550	COG0601	transmembrane transport
AUC62_RS09555	COG4166	transmembrane transport
AUC62_RS09560	COG0765	amino acid transport
AUC62_RS09565	COG0765	amino acid transport
AUC62_RS09570	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUC62_RS09575	COG1126	abc transporter atp-binding protein
AUC62_RS09590	COG0194	GDP metabolic process
AUC62_RS09595	COG1268	BioY protein
AUC62_RS09600	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AUC62_RS09600	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AUC62_RS09625	COG2211	Major facilitator Superfamily
AUC62_RS09630	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AUC62_RS09645	COG3973	AAA domain
AUC62_RS09665	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AUC62_RS09675	COG1696	Membrane protein involved in D-alanine export
AUC62_RS09695	COG2337	Toxic component of a toxin-antitoxin (TA) module
AUC62_RS09710	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AUC62_RS09715	COG0504	CTP synthase activity
AUC62_RS09725	COG3343	RNA polymerase activity
AUC62_RS09730	COG0561	phosphatase activity
AUC62_RS09735	COG1078	dGTPase activity
AUC62_RS09745	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AUC62_RS09750	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AUC62_RS09770	COG0745	RESPONSE REGULATOR receiver
AUC62_RS09800	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AUC62_RS09805	COG0629	single-stranded DNA binding
AUC62_RS09810	COG0360	Binds together with S18 to 16S ribosomal RNA
AUC62_RS09825	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AUC62_RS09835	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AUC62_RS09840	COG1051	belongs to the nudix hydrolase family
AUC62_RS09855	COG2814	Major facilitator Superfamily
AUC62_RS09860	COG1064	alcohol dehydrogenase
AUC62_RS09865	COG1074	ATP-dependent DNA helicase activity
AUC62_RS09870	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
AUC62_RS09885	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AUC62_RS09890	COG0531	amino acid
AUC62_RS09895	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AUC62_RS09905	COG1902	pentaerythritol trinitrate reductase activity
AUC62_RS09910	COG0626	cystathionine gamma-synthase activity
AUC62_RS09925	COG2244	polysaccharide biosynthetic process
AUC62_RS09935	COG0438	transferase activity, transferring glycosyl groups
AUC62_RS09940	COG0495	leucyl-tRNA aminoacylation
AUC62_RS09945	COG0671	phosphoesterase, PA-phosphatase related
AUC62_RS09955	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AUC62_RS09980	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS09995	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AUC62_RS10005	COG2801	Transposase and inactivated derivatives
AUC62_RS10015	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AUC62_RS10025	COG0024	Methionine aminopeptidase
AUC62_RS10035	COG1316	TRANSCRIPTIONal
AUC62_RS10045	COG2205	protein histidine kinase activity
AUC62_RS10050	COG0745	RESPONSE REGULATOR receiver
AUC62_RS10055	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AUC62_RS10070	COG2207	Transcriptional regulator
AUC62_RS10090	COG0308	aminopeptidase N
AUC62_RS10095	COG0833	amino acid
AUC62_RS10100	COG2040	homocysteine
AUC62_RS10105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AUC62_RS10110	COG0542	response to heat
AUC62_RS10125	COG0395	ABC-type sugar transport system, permease component
AUC62_RS10130	COG1175	transmembrane transport
AUC62_RS10135	COG3842	ATPase activity
AUC62_RS10245	COG0438	transferase activity, transferring glycosyl groups
AUC62_RS10275	COG2084	Dehydrogenase
AUC62_RS10280	COG1028	Short-chain dehydrogenase reductase Sdr
AUC62_RS10290	COG1620	l-lactate permease
AUC62_RS10295	COG4989	oxidoreductase activity
AUC62_RS10300	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AUC62_RS10305	COG2233	PERMEase
AUC62_RS10320	COG1956	GAF domain-containing protein
AUC62_RS10335	COG1132	(ABC) transporter
AUC62_RS10345	COG0747	negative chemotaxis
AUC62_RS10350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AUC62_RS10355	COG0601	transmembrane transport
AUC62_RS10360	COG4608	Belongs to the ABC transporter superfamily
AUC62_RS10365	COG0444	Belongs to the ABC transporter superfamily
AUC62_RS10370	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AUC62_RS10375	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AUC62_RS10380	COG2211	Major facilitator Superfamily
AUC62_RS10380	COG2190	(PTS) system
AUC62_RS10400	COG0436	Aminotransferase
AUC62_RS10410	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUC62_RS10415	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS10420	COG2723	6-phospho-beta-galactosidase activity
AUC62_RS10425	COG1447	Phosphotransferase system cellobiose-specific component IIA
AUC62_RS10430	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUC62_RS10435	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AUC62_RS10450	COG1216	Glycosyl transferase, family 2
AUC62_RS10465	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AUC62_RS10510	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AUC62_RS10515	COG1737	Transcriptional regulator
AUC62_RS10525	COG0656	L-ascorbic acid biosynthetic process
AUC62_RS10530	COG2261	transglycosylase associated protein
AUC62_RS10595	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AUC62_RS10600	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AUC62_RS10615	COG0037	tRNA processing
AUC62_RS10625	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AUC62_RS10630	COG2244	polysaccharide biosynthetic process
AUC62_RS10635	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AUC62_RS10640	COG0193	aminoacyl-tRNA hydrolase activity
AUC62_RS10650	COG0058	SHG alpha-glucan phosphorylase activity
AUC62_RS10655	COG0297	glycogen (starch) synthase activity
AUC62_RS10660	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AUC62_RS10670	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AUC62_RS10675	COG1511	domain protein
AUC62_RS10675	COG1511	domain protein
AUC62_RS10680	COG1309	transcriptional regulator
AUC62_RS10695	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AUC62_RS10700	COG0477	Major facilitator Superfamily
AUC62_RS10715	COG0667	Aldo Keto reductase
AUC62_RS10725	COG2115	Belongs to the xylose isomerase family
AUC62_RS10735	COG2211	Major facilitator Superfamily
AUC62_RS10740	COG3507	Belongs to the glycosyl hydrolase 43 family
AUC62_RS10765	COG2818	Glycosylase
AUC62_RS10770	COG1968	undecaprenyl-diphosphatase activity
AUC62_RS10785	COG1695	Transcriptional regulator
AUC62_RS10790	COG1983	PspC domain protein
AUC62_RS10795	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AUC62_RS10800	COG0737	Belongs to the 5'-nucleotidase family
AUC62_RS10815	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AUC62_RS10830	COG1263	PTS System
AUC62_RS10830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AUC62_RS10835	COG1316	TRANSCRIPTIONal
AUC62_RS10845	COG2131	deaminase
AUC62_RS10850	COG4466	Protein conserved in bacteria
AUC62_RS10855	COG1253	flavin adenine dinucleotide binding
AUC62_RS10860	COG1253	flavin adenine dinucleotide binding
AUC62_RS10865	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AUC62_RS10870	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AUC62_RS10875	COG0084	hydrolase, TatD family'
AUC62_RS10885	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUC62_RS10885	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AUC62_RS10945	COG1250	3-hydroxyacyl-CoA dehydrogenase
AUC62_RS10950	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AUC62_RS10960	COG2801	Transposase and inactivated derivatives
AUC62_RS10965	COG2910	NAD(P)H-binding
AUC62_RS10970	COG1733	regulation of RNA biosynthetic process
AUC62_RS10990	COG1573	uracil-dna glycosylase
AUC62_RS10995	COG2801	Transposase and inactivated derivatives
AUC62_RS11040	COG0783	Belongs to the Dps family
AUC62_RS11045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein