AUC65_RS00055	SM00422	helix_turn_helix, mercury resistance
AUC65_RS00075	SM00434	DNA Topoisomerase IV
AUC65_RS00080	SM00387	Histidine kinase-like ATPases
AUC65_RS00080	SM00433	TopoisomeraseII
AUC65_RS00095	SM00480	DNA polymerase III beta subunit
AUC65_RS00100	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00100	SM00760	Bacterial dnaA protein helix-turn-helix domain
AUC65_RS00125	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00140	SM00725	NEAr Transporter domain
AUC65_RS00210	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00290	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS00335	SM00901	AUC65_RS00335
AUC65_RS00370	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS00375	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS00380	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00425	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS00450	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AUC65_RS00475	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AUC65_RS00480	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AUC65_RS00500	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00520	SM00422	helix_turn_helix, mercury resistance
AUC65_RS00570	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS00575	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00595	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AUC65_RS00610	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00620	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS00630	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS00635	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS00735	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS00755	SM00882	Coenzyme A transferase
AUC65_RS00770	SM00479	AUC65_RS00770
AUC65_RS00840	SM00829	Enoylreductase
AUC65_RS00875	SM00870	AUC65_RS00875
AUC65_RS00925	SM00448	cheY-homologous receiver domain
AUC65_RS00925	SM00862	Transcriptional regulatory protein, C terminal
AUC65_RS00930	SM00387	Histidine kinase-like ATPases
AUC65_RS00930	SM00388	His Kinase A (phosphoacceptor) domain
AUC65_RS00975	SM00478	endonuclease III
AUC65_RS00995	SM00470	ParB-like nuclease domain
AUC65_RS01015	SM00448	cheY-homologous receiver domain
AUC65_RS01015	SM00862	Transcriptional regulatory protein, C terminal
AUC65_RS01020	SM00387	Histidine kinase-like ATPases
AUC65_RS01020	SM00388	His Kinase A (phosphoacceptor) domain
AUC65_RS01120	SM00478	endonuclease III
AUC65_RS01130	SM00731	SprT homologues.
AUC65_RS01150	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS01160	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01175	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AUC65_RS01215	SM01007	Class II Aldolase and Adducin N-terminal domain
AUC65_RS01255	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01260	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS01330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AUC65_RS01330	SM00866	AUC65_RS01330
AUC65_RS01470	SM00855	Phosphoglycerate mutase family
AUC65_RS01490	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01495	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01555	SM00937	AUC65_RS01555
AUC65_RS01625	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01675	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01675	SM01086	C-terminal, D2-small domain, of ClpB protein
AUC65_RS01685	SM00663	RNA polymerase I subunit A N-terminus
AUC65_RS01720	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS01760	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS01795	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS01805	SM00493	AUC65_RS01805
AUC65_RS01875	SM01403	AUC65_RS01875
AUC65_RS01895	SM01382	AUC65_RS01895
AUC65_RS01895	SM01383	AUC65_RS01895
AUC65_RS01910	SM00322	K homology RNA-binding domain
AUC65_RS01930	SM01374	AUC65_RS01930
AUC65_RS01935	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AUC65_RS01985	SM00316	Ribosomal protein S1-like RNA-binding domain
AUC65_RS02005	SM00662	RNA polymerases D
AUC65_RS02025	SM00244	prohibitin homologues
AUC65_RS02035	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02035	SM00930	AUC65_RS02035
AUC65_RS02100	SM00878	Biotin carboxylase C-terminal domain
AUC65_RS02105	SM00840	AUC65_RS02105
AUC65_RS02135	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AUC65_RS02155	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AUC65_RS02155	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AUC65_RS02160	SM00649	Ribosomal protein L11/L12
AUC65_RS02185	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02210	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02215	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02240	SM00822	AUC65_RS02240
AUC65_RS02270	SM00986	Uracil DNA glycosylase superfamily
AUC65_RS02270	SM00987	UreE urease accessory protein, C-terminal domain 
AUC65_RS02275	SM00365	Leucine-rich repeat, SDS22-like subfamily
AUC65_RS02285	SM00642	Alpha-amylase domain
AUC65_RS02295	SM00014	Acid phosphatase homologues
AUC65_RS02310	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02335	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AUC65_RS02365	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS02390	SM00829	Enoylreductase
AUC65_RS02395	SM00257	Lysin motif
AUC65_RS02415	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02420	SM00670	Large family of predicted nucleotide-binding domains
AUC65_RS02430	SM00957	SecA DEAD-like domain
AUC65_RS02430	SM00958	SecA preprotein cross-linking domain
AUC65_RS02435	SM00937	AUC65_RS02435
AUC65_RS02455	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AUC65_RS02475	SM00873	B3/4 domain
AUC65_RS02475	SM00874	tRNA synthetase B5 domain
AUC65_RS02475	SM00896	Ferredoxin-fold anticodon binding domain
AUC65_RS02485	SM00341	Helicase and RNase D C-terminal
AUC65_RS02485	SM00487	DEAD-like helicases superfamily
AUC65_RS02485	SM00490	helicase superfamily c-terminal domain
AUC65_RS02485	SM00956	AUC65_RS02485
AUC65_RS02525	SM00257	Lysin motif
AUC65_RS02530	SM00257	Lysin motif
AUC65_RS02535	SM00257	Lysin motif
AUC65_RS02540	SM00450	Rhodanese Homology Domain
AUC65_RS02560	SM00422	helix_turn_helix, mercury resistance
AUC65_RS02565	SM01230	AUC65_RS02565
AUC65_RS02600	SM01217	AUC65_RS02600
AUC65_RS02610	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02635	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AUC65_RS02710	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02715	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02770	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02945	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS02950	SM00883	Chaperonin 10 Kd subunit
AUC65_RS02985	SM01103	AUC65_RS02985
AUC65_RS02995	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AUC65_RS03020	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AUC65_RS03020	SM00534	ATPase domain of DNA mismatch repair MUTS family
AUC65_RS03025	SM00853	MutL C terminal dimerisation domain
AUC65_RS03025	SM01340	AUC65_RS03025
AUC65_RS03115	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AUC65_RS03130	SM00411	bacterial (prokaryotic) histone like domain
AUC65_RS03145	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS03205	SM00072	Guanylate kinase homologues.
AUC65_RS03210	SM01409	AUC65_RS03210
AUC65_RS03225	SM00316	Ribosomal protein S1-like RNA-binding domain
AUC65_RS03330	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS03355	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS03360	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS03365	SM00047	Lysozyme subfamily 2
AUC65_RS03385	SM00357	Cold shock protein domain
AUC65_RS03420	SM00257	Lysin motif
AUC65_RS03465	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS03520	SM01057	Eukaryotic-type carbonic anhydrase
AUC65_RS03535	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS03540	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS03550	SM01001	AIR carboxylase
AUC65_RS03570	SM01211	AUC65_RS03570
AUC65_RS03595	SM00798	AICARFT/IMPCHase bienzyme
AUC65_RS03595	SM00851	MGS-like domain
AUC65_RS03600	SM01209	AUC65_RS03600
AUC65_RS03600	SM01210	AUC65_RS03600
AUC65_RS03675	SM00740	AUC65_RS03675
AUC65_RS03700	SM00842	Cell division protein FtsA
AUC65_RS03705	SM00864	Tubulin/FtsZ family, GTPase domain
AUC65_RS03705	SM00865	Tubulin/FtsZ family, C-terminal domain
AUC65_RS03720	SM00363	S4 RNA-binding domain
AUC65_RS03735	SM00855	Phosphoglycerate mutase family
AUC65_RS03740	SM00028	Tetratricopeptide repeats
AUC65_RS03805	SM00487	DEAD-like helicases superfamily
AUC65_RS03805	SM00490	helicase superfamily c-terminal domain
AUC65_RS03820	SM00331	Sigma factor PP2C-like phosphatases
AUC65_RS03820	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AUC65_RS03825	SM00220	Serine/Threonine protein kinases, catalytic domain
AUC65_RS03825	SM00740	AUC65_RS03825
AUC65_RS03840	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AUC65_RS03855	SM01120	AUC65_RS03855
AUC65_RS03855	SM01121	AUC65_RS03855
AUC65_RS03880	SM00487	DEAD-like helicases superfamily
AUC65_RS03880	SM00490	helicase superfamily c-terminal domain
AUC65_RS03895	SM00358	Double-stranded RNA binding motif
AUC65_RS03895	SM00535	Ribonuclease III family
AUC65_RS03900	SM00968	SMC proteins Flexible Hinge Domain
AUC65_RS03905	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS03905	SM00962	SRP54-type protein, GTPase domain
AUC65_RS03905	SM00963	SRP54-type protein, helical bundle domain
AUC65_RS03915	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS03915	SM00962	SRP54-type protein, GTPase domain
AUC65_RS03915	SM00963	SRP54-type protein, helical bundle domain
AUC65_RS03945	SM00855	Phosphoglycerate mutase family
AUC65_RS03985	SM00257	Lysin motif
AUC65_RS04130	SM00354	helix_turn _helix lactose operon repressor
AUC65_RS04225	SM00287	Bacterial SH3 domain homologues
AUC65_RS04225	SM00646	AUC65_RS04225
AUC65_RS04330	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS04330	SM00843	AUC65_RS04330
AUC65_RS04340	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS04355	SM00465	GIY-YIG type nucleases (URI domain)
AUC65_RS04380	SM01240	AUC65_RS04380
AUC65_RS04385	SM01240	AUC65_RS04385
AUC65_RS04395	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AUC65_RS04400	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS04445	SM01323	AUC65_RS04445
AUC65_RS04460	SM00487	DEAD-like helicases superfamily
AUC65_RS04460	SM00490	helicase superfamily c-terminal domain
AUC65_RS04475	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AUC65_RS04485	SM00732	Likely ribonuclease with RNase H fold.
AUC65_RS04505	SM00849	Metallo-beta-lactamase superfamily
AUC65_RS04515	SM01387	AUC65_RS04515
AUC65_RS04525	SM00849	Metallo-beta-lactamase superfamily
AUC65_RS04550	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS04550	SM00994	ClpX C4-type zinc finger
AUC65_RS04550	SM01086	C-terminal, D2-small domain, of ClpB protein
AUC65_RS04575	SM00463	Small MutS-related domain
AUC65_RS04575	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AUC65_RS04575	SM00534	ATPase domain of DNA mismatch repair MUTS family
AUC65_RS04600	SM00433	TopoisomeraseII
AUC65_RS04605	SM00434	DNA Topoisomerase IV
AUC65_RS04715	SM00829	Enoylreductase
AUC65_RS04725	SM00487	DEAD-like helicases superfamily
AUC65_RS04725	SM00974	AUC65_RS04725
AUC65_RS04775	SM00487	DEAD-like helicases superfamily
AUC65_RS04775	SM00490	helicase superfamily c-terminal domain
AUC65_RS04990	SM00954	Region found in RelA / SpoT proteins
AUC65_RS05005	SM00116	Domain in cystathionine beta-synthase and other proteins.
AUC65_RS05005	SM00924	MgtE intracellular N domain
AUC65_RS05025	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS05090	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS05115	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AUC65_RS05155	SM00640	Glycosyl hydrolases family 32
AUC65_RS05170	SM00830	Chorismate mutase type II
AUC65_RS05200	SM01240	AUC65_RS05200
AUC65_RS05255	SM00892	DNA/RNA non-specific endonuclease
AUC65_RS05260	SM00904	Riboflavin kinase
AUC65_RS05275	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS05330	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AUC65_RS05330	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AUC65_RS05330	SM00493	AUC65_RS05330
AUC65_RS05345	SM01207	AUC65_RS05345
AUC65_RS05350	SM01131	AUC65_RS05350
AUC65_RS05360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AUC65_RS05365	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS05390	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AUC65_RS05410	SM00849	Metallo-beta-lactamase superfamily
AUC65_RS05445	SM00838	Elongation factor G C-terminus
AUC65_RS05485	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AUC65_RS05495	SM00400	zinc finger
AUC65_RS05495	SM00493	AUC65_RS05495
AUC65_RS05530	SM00448	cheY-homologous receiver domain
AUC65_RS05530	SM00862	Transcriptional regulatory protein, C terminal
AUC65_RS05535	SM00387	Histidine kinase-like ATPases
AUC65_RS05535	SM00388	His Kinase A (phosphoacceptor) domain
AUC65_RS05570	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AUC65_RS05570	SM00474	3'-5' exonuclease
AUC65_RS05570	SM00475	5'-3' exonuclease
AUC65_RS05570	SM00482	DNA polymerase A domain
AUC65_RS05575	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AUC65_RS05575	SM01232	AUC65_RS05575
AUC65_RS05605	SM00448	cheY-homologous receiver domain
AUC65_RS05605	SM00862	Transcriptional regulatory protein, C terminal
AUC65_RS05610	SM00387	Histidine kinase-like ATPases
AUC65_RS05610	SM00388	His Kinase A (phosphoacceptor) domain
AUC65_RS05620	SM00047	Lysozyme subfamily 2
AUC65_RS05685	SM00479	AUC65_RS05685
AUC65_RS05685	SM00487	DEAD-like helicases superfamily
AUC65_RS05685	SM00491	AUC65_RS05685
AUC65_RS05730	SM00981	AUC65_RS05730
AUC65_RS05740	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AUC65_RS05740	SM00292	breast cancer carboxy-terminal domain
AUC65_RS05740	SM00532	Ligase N family
AUC65_RS05760	SM00487	DEAD-like helicases superfamily
AUC65_RS05760	SM00490	helicase superfamily c-terminal domain
AUC65_RS05770	SM00878	Biotin carboxylase C-terminal domain
AUC65_RS05805	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS05865	SM00420	helix_turn_helix, Deoxyribose operon repressor
AUC65_RS05865	SM01134	AUC65_RS05865
AUC65_RS05885	SM00354	helix_turn _helix lactose operon repressor
AUC65_RS05890	SM00829	Enoylreductase
AUC65_RS05945	SM00838	Elongation factor G C-terminus
AUC65_RS05960	SM01038	Beta galactosidase small chain
AUC65_RS05970	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS05970	SM01086	C-terminal, D2-small domain, of ClpB protein
AUC65_RS06005	SM00919	Malic enzyme, NAD binding domain
AUC65_RS06005	SM01274	AUC65_RS06005
AUC65_RS06030	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS06105	SM00028	Tetratricopeptide repeats
AUC65_RS06170	SM00411	bacterial (prokaryotic) histone like domain
AUC65_RS06180	SM00316	Ribosomal protein S1-like RNA-binding domain
AUC65_RS06195	SM00487	DEAD-like helicases superfamily
AUC65_RS06195	SM00490	helicase superfamily c-terminal domain
AUC65_RS06220	SM00363	S4 RNA-binding domain
AUC65_RS06270	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AUC65_RS06270	SM00954	Region found in RelA / SpoT proteins
AUC65_RS06275	SM00481	DNA polymerase alpha chain like domain
AUC65_RS06290	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS06425	SM00563	Phosphate acyltransferases
AUC65_RS06480	SM00849	Metallo-beta-lactamase superfamily
AUC65_RS06495	SM00271	DnaJ molecular chaperone homology domain
AUC65_RS06560	SM00047	Lysozyme subfamily 2
AUC65_RS06610	SM00641	Glycosyl hydrolases family 25
AUC65_RS06685	SM00357	Cold shock protein domain
AUC65_RS06700	SM00257	Lysin motif
AUC65_RS06720	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS06775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AUC65_RS06850	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS06855	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS06860	SM00836	DALR anticodon binding domain
AUC65_RS06860	SM01016	Arginyl tRNA synthetase N terminal dom
AUC65_RS06885	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS06905	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AUC65_RS06910	SM00845	GatB domain
AUC65_RS06935	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AUC65_RS06935	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
AUC65_RS06985	SM01400	AUC65_RS06985
AUC65_RS06995	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS07180	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS07245	SM01040	BRO family, N-terminal domain
AUC65_RS07260	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS07300	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AUC65_RS07315	SM01130	AUC65_RS07315
AUC65_RS07335	SM01005	Alanine racemase, C-terminal domain
AUC65_RS07350	SM00354	helix_turn _helix lactose operon repressor
AUC65_RS07370	SM00529	Helix-turn-helix diphteria tox regulatory element
AUC65_RS07390	SM00881	CoA binding domain
AUC65_RS07395	SM00487	DEAD-like helicases superfamily
AUC65_RS07395	SM00490	helicase superfamily c-terminal domain
AUC65_RS07465	SM00878	Biotin carboxylase C-terminal domain
AUC65_RS07480	SM00825	Beta-ketoacyl synthase
AUC65_RS07485	SM00822	AUC65_RS07485
AUC65_RS07490	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AUC65_RS07510	SM00347	helix_turn_helix multiple antibiotic resistance protein
AUC65_RS07525	SM00998	Adenylosuccinate lyase C-terminus
AUC65_RS07535	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AUC65_RS07540	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AUC65_RS07550	SM00363	S4 RNA-binding domain
AUC65_RS07580	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS07595	SM00838	Elongation factor G C-terminus
AUC65_RS07615	SM00562	AUC65_RS07615
AUC65_RS07620	SM00155	Phospholipase D. Active site motifs.
AUC65_RS07635	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AUC65_RS07660	SM00530	Helix-turn-helix XRE-family like proteins 
AUC65_RS07670	SM00892	DNA/RNA non-specific endonuclease
AUC65_RS07680	SM00855	Phosphoglycerate mutase family
AUC65_RS07800	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AUC65_RS07810	SM00851	MGS-like domain
AUC65_RS07810	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AUC65_RS07815	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AUC65_RS07870	SM00479	AUC65_RS07870
AUC65_RS07890	SM00986	Uracil DNA glycosylase superfamily
AUC65_RS07890	SM00987	UreE urease accessory protein, C-terminal domain 
AUC65_RS07910	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS07915	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS07915	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AUC65_RS07935	SM00316	Ribosomal protein S1-like RNA-binding domain
AUC65_RS07935	SM00955	AUC65_RS07935
AUC65_RS07955	SM01192	AUC65_RS07955
AUC65_RS07955	SM01193	AUC65_RS07955
AUC65_RS08075	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS08085	SM00838	Elongation factor G C-terminus
AUC65_RS08085	SM00889	Elongation factor G, domain IV
AUC65_RS08105	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS08110	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS08180	SM00841	Elongation factor P, C-terminal
AUC65_RS08180	SM01185	AUC65_RS08180
AUC65_RS08205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AUC65_RS08205	SM00387	Histidine kinase-like ATPases
AUC65_RS08205	SM00388	His Kinase A (phosphoacceptor) domain
AUC65_RS08210	SM00448	cheY-homologous receiver domain
AUC65_RS08210	SM00862	Transcriptional regulatory protein, C terminal
AUC65_RS08230	SM00257	Lysin motif
AUC65_RS08235	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AUC65_RS08235	SM00493	AUC65_RS08235
AUC65_RS08260	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS08270	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS08295	SM01240	AUC65_RS08295
AUC65_RS08360	SM00490	helicase superfamily c-terminal domain
AUC65_RS08375	SM00487	DEAD-like helicases superfamily
AUC65_RS08405	SM01134	AUC65_RS08405
AUC65_RS08425	SM00354	helix_turn _helix lactose operon repressor
AUC65_RS08440	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AUC65_RS08460	SM00354	helix_turn _helix lactose operon repressor
AUC65_RS08495	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS08500	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS08530	SM00905	Dihydroneopterin aldolase
AUC65_RS08620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AUC65_RS08620	SM00895	AUC65_RS08620
AUC65_RS08640	SM00354	helix_turn _helix lactose operon repressor
AUC65_RS08675	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS08715	SM00322	K homology RNA-binding domain
AUC65_RS08715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AUC65_RS08845	SM00844	GA module
AUC65_RS08855	SM01061	CAT RNA binding domain
AUC65_RS08890	SM00316	Ribosomal protein S1-like RNA-binding domain
AUC65_RS08890	SM00732	Likely ribonuclease with RNase H fold.
AUC65_RS08915	SM00487	DEAD-like helicases superfamily
AUC65_RS08915	SM00490	helicase superfamily c-terminal domain
AUC65_RS08960	SM01022	AUC65_RS08960
AUC65_RS08995	SM00479	AUC65_RS08995
AUC65_RS08995	SM00481	DNA polymerase alpha chain like domain
AUC65_RS09005	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AUC65_RS09070	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS09125	SM00235	Zinc-dependent metalloprotease
AUC65_RS09190	SM00910	AUC65_RS09190
AUC65_RS09215	SM00788	Adenylosuccinate synthetase
AUC65_RS09220	SM00831	Cation transporter/ATPase, N-terminus
AUC65_RS09255	SM00363	S4 RNA-binding domain
AUC65_RS09255	SM01390	AUC65_RS09255
AUC65_RS09265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AUC65_RS09265	SM00866	AUC65_RS09265
AUC65_RS09275	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS09350	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS09370	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AUC65_RS09405	SM00855	Phosphoglycerate mutase family
AUC65_RS09505	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS09510	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS09540	SM00062	Bacterial periplasmic substrate-binding proteins
AUC65_RS09540	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AUC65_RS09545	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS09560	SM00072	Guanylate kinase homologues.
AUC65_RS09670	SM01005	Alanine racemase, C-terminal domain
AUC65_RS09675	SM00487	DEAD-like helicases superfamily
AUC65_RS09675	SM00490	helicase superfamily c-terminal domain
AUC65_RS09705	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AUC65_RS09715	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AUC65_RS09720	SM00849	Metallo-beta-lactamase superfamily
AUC65_RS09735	SM00091	PAS domain
AUC65_RS09735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AUC65_RS09735	SM00387	Histidine kinase-like ATPases
AUC65_RS09735	SM00388	His Kinase A (phosphoacceptor) domain
AUC65_RS09740	SM00448	cheY-homologous receiver domain
AUC65_RS09740	SM00862	Transcriptional regulatory protein, C terminal
AUC65_RS09795	SM01400	AUC65_RS09795
AUC65_RS09830	SM00829	Enoylreductase
AUC65_RS09865	SM01350	AUC65_RS09865
AUC65_RS09915	SM00014	Acid phosphatase homologues
AUC65_RS10015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AUC65_RS10015	SM00387	Histidine kinase-like ATPases
AUC65_RS10015	SM00388	His Kinase A (phosphoacceptor) domain
AUC65_RS10020	SM00448	cheY-homologous receiver domain
AUC65_RS10020	SM00862	Transcriptional regulatory protein, C terminal
AUC65_RS10040	SM00342	helix_turn_helix, arabinose operon control protein
AUC65_RS10055	SM00342	helix_turn_helix, arabinose operon control protein
AUC65_RS10080	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS10080	SM01086	C-terminal, D2-small domain, of ClpB protein
AUC65_RS10085	SM00849	Metallo-beta-lactamase superfamily
AUC65_RS10105	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS10305	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS10330	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS10335	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS10355	SM00342	helix_turn_helix, arabinose operon control protein
AUC65_RS10425	SM00829	Enoylreductase
AUC65_RS10480	SM01350	AUC65_RS10480
AUC65_RS10575	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS10595	SM00363	S4 RNA-binding domain
AUC65_RS10605	SM00487	DEAD-like helicases superfamily
AUC65_RS10605	SM00490	helicase superfamily c-terminal domain
AUC65_RS10605	SM00982	AUC65_RS10605
AUC65_RS10605	SM01058	CarD-like/TRCF domain
AUC65_RS10615	SM00642	Alpha-amylase domain
AUC65_RS10640	SM00642	Alpha-amylase domain
AUC65_RS10680	SM00257	Lysin motif
AUC65_RS10785	SM00382	ATPases associated with a variety of cellular activities
AUC65_RS10825	SM01091	Transporter associated domain
AUC65_RS10830	SM00116	Domain in cystathionine beta-synthase and other proteins.
AUC65_RS10830	SM01091	Transporter associated domain
AUC65_RS10835	SM00650	Ribosomal RNA adenine dimethylases
AUC65_RS10840	SM00493	AUC65_RS10840
