locus-tag class description WM2015_RS00005 PF11638 DnaA N-terminal domain WM2015_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix WM2015_RS00005 PF00308 Bacterial dnaA protein WM2015_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain WM2015_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain WM2015_RS00010 PF02767 DNA polymerase III beta subunit, central domain WM2015_RS00015 PF02463 RecF/RecN/SMC N terminal domain WM2015_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus WM2015_RS00020 PF01751 Toprim domain WM2015_RS00020 PF18053 DNA gyrase B subunit insert domain WM2015_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS00020 PF00204 DNA gyrase B WM2015_RS00030 PF05746 DALR anticodon binding domain WM2015_RS00030 PF02092 Glycyl-tRNA synthetase beta subunit WM2015_RS00035 PF02091 Glycyl-tRNA synthetase alpha subunit WM2015_RS00040 PF00958 GMP synthase C terminal domain WM2015_RS00040 PF02540 NAD synthase WM2015_RS00040 PF00117 Glutamine amidotransferase class-I WM2015_RS00050 PF00753 Metallo-beta-lactamase superfamily WM2015_RS00050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WM2015_RS00050 PF10996 Beta-Casp domain WM2015_RS00055 PF02885 Glycosyl transferase family, helical bundle domain WM2015_RS00055 PF00591 Glycosyl transferase family, a/b domain WM2015_RS00055 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain WM2015_RS00060 PF14572 Phosphoribosyl synthetase-associated domain WM2015_RS00060 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WM2015_RS00065 PF13649 Methyltransferase domain WM2015_RS00075 PF08003 Protein of unknown function (DUF1698) WM2015_RS00085 PF00209 Sodium:neurotransmitter symporter family WM2015_RS00095 PF00005 ABC transporter WM2015_RS00110 PF00326 Prolyl oligopeptidase family WM2015_RS00110 PF07676 WD40-like Beta Propeller Repeat WM2015_RS00110 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_RS00115 PF01928 CYTH domain WM2015_RS00125 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_RS00130 PF17151 Periplasmic sensor domain WM2015_RS00130 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS00145 PF00085 Thioredoxin WM2015_RS00145 PF11412 Disulphide bond corrector protein DsbC WM2015_RS00145 PF02683 Cytochrome C biogenesis protein transmembrane region WM2015_RS00150 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WM2015_RS00150 PF06827 Zinc finger found in FPG and IleRS WM2015_RS00150 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WM2015_RS00155 PF00909 Ammonium Transporter Family WM2015_RS00160 PF00543 Nitrogen regulatory protein P-II WM2015_RS00165 PF00326 Prolyl oligopeptidase family WM2015_RS00180 PF05872 Bacterial protein of unknown function (DUF853) WM2015_RS00185 PF00561 alpha/beta hydrolase fold WM2015_RS00195 PF00313 'Cold-shock' DNA-binding domain WM2015_RS00205 PF00282 Pyridoxal-dependent decarboxylase conserved domain WM2015_RS00220 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS00220 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS00220 PF00563 EAL domain WM2015_RS00225 PF01168 Alanine racemase, N-terminal domain WM2015_RS00225 PF14031 Putative serine dehydratase domain WM2015_RS00240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_RS00240 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS00240 PF00403 Heavy-metal-associated domain WM2015_RS00260 PF01061 ABC-2 type transporter WM2015_RS00265 PF00005 ABC transporter WM2015_RS00315 PF00092 von Willebrand factor type A domain WM2015_RS00315 PF12034 Domain of unknown function (DUF3520) WM2015_RS00315 PF12450 von Willebrand factor WM2015_RS00355 PF01979 Amidohydrolase family WM2015_RS00370 PF00082 Subtilase family WM2015_RS00370 PF05922 Peptidase inhibitor I9 WM2015_RS00405 PF07694 5TMR of 5TMR-LYT WM2015_RS00405 PF06580 Histidine kinase WM2015_RS00410 PF04397 LytTr DNA-binding domain WM2015_RS00410 PF00072 Response regulator receiver domain WM2015_RS00415 PF02696 Uncharacterized ACR, YdiU/UPF0061 family WM2015_RS00420 PF02469 Fasciclin domain WM2015_RS00425 PF00082 Subtilase family WM2015_RS00425 PF05922 Peptidase inhibitor I9 WM2015_RS00445 PF00474 Sodium:solute symporter family WM2015_RS00450 PF01063 Amino-transferase class IV WM2015_RS00460 PF03572 Peptidase family S41 WM2015_RS00460 PF07676 WD40-like Beta Propeller Repeat WM2015_RS00460 PF14685 Tricorn protease PDZ domain WM2015_RS00460 PF14684 Tricorn protease C1 domain WM2015_RS00470 PF02687 FtsX-like permease family WM2015_RS00470 PF12704 MacB-like periplasmic core domain WM2015_RS00470 PF00005 ABC transporter WM2015_RS00475 PF00005 ABC transporter WM2015_RS00480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM2015_RS00500 PF03477 ATP cone domain WM2015_RS00500 PF02867 Ribonucleotide reductase, barrel domain WM2015_RS00500 PF00317 Ribonucleotide reductase, all-alpha domain WM2015_RS00510 PF00155 Aminotransferase class I and II WM2015_RS00520 PF03079 ARD/ARD' family WM2015_RS00525 PF00596 Class II Aldolase and Adducin N-terminal domain WM2015_RS00555 PF01979 Amidohydrolase family WM2015_RS00560 PF13382 Adenine deaminase C-terminal domain WM2015_RS00560 PF01979 Amidohydrolase family WM2015_RS00565 PF00830 Ribosomal L28 family WM2015_RS00570 PF00471 Ribosomal protein L33 WM2015_RS00575 PF04002 RadC-like JAB domain WM2015_RS00580 PF02441 Flavoprotein WM2015_RS00580 PF04127 DNA / pantothenate metabolism flavoprotein WM2015_RS00585 PF00692 dUTPase WM2015_RS00590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM2015_RS00590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM2015_RS00590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM2015_RS00590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM2015_RS00595 PF00849 RNA pseudouridylate synthase WM2015_RS00600 PF04107 Glutamate-cysteine ligase family 2(GCS2) WM2015_RS00605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM2015_RS00610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WM2015_RS00615 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS00620 PF12911 N-terminal TM domain of oligopeptide transport permease C WM2015_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS00625 PF16916 Dimerisation domain of Zinc Transporter WM2015_RS00625 PF01545 Cation efflux family WM2015_RS00630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM2015_RS00630 PF00005 ABC transporter WM2015_RS00635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WM2015_RS00635 PF00005 ABC transporter WM2015_RS00645 PF02527 rRNA small subunit methyltransferase G WM2015_RS00650 PF13614 AAA domain WM2015_RS00655 PF17762 HTH domain found in ParB protein WM2015_RS00655 PF02195 ParB-like nuclease domain WM2015_RS00660 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS00660 PF00672 HAMP domain WM2015_RS00665 PF00158 Sigma-54 interaction domain WM2015_RS00665 PF00072 Response regulator receiver domain WM2015_RS00665 PF02954 Bacterial regulatory protein, Fis family WM2015_RS00670 PF00005 ABC transporter WM2015_RS00670 PF02687 FtsX-like permease family WM2015_RS00670 PF12704 MacB-like periplasmic core domain WM2015_RS00675 PF02687 FtsX-like permease family WM2015_RS00675 PF12704 MacB-like periplasmic core domain WM2015_RS00680 PF00005 ABC transporter WM2015_RS00680 PF02687 FtsX-like permease family WM2015_RS00680 PF12704 MacB-like periplasmic core domain WM2015_RS00690 PF00106 short chain dehydrogenase WM2015_RS00700 PF00119 ATP synthase A chain WM2015_RS00705 PF00137 ATP synthase subunit C WM2015_RS00710 PF00430 ATP synthase B/B' CF(0) WM2015_RS00715 PF00213 ATP synthase delta (OSCP) subunit WM2015_RS00720 PF02874 ATP synthase alpha/beta family, beta-barrel domain WM2015_RS00720 PF00306 ATP synthase alpha/beta chain, C terminal domain WM2015_RS00720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM2015_RS00725 PF00231 ATP synthase WM2015_RS00730 PF02874 ATP synthase alpha/beta family, beta-barrel domain WM2015_RS00730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM2015_RS00735 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain WM2015_RS00735 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WM2015_RS00740 PF05922 Peptidase inhibitor I9 WM2015_RS00740 PF00082 Subtilase family WM2015_RS00760 PF01171 PP-loop family WM2015_RS00770 PF01553 Acyltransferase WM2015_RS00775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WM2015_RS00780 PF12697 Alpha/beta hydrolase family WM2015_RS00785 PF00580 UvrD/REP helicase N-terminal domain WM2015_RS00785 PF13361 UvrD-like helicase C-terminal domain WM2015_RS00790 PF02843 Phosphoribosylglycinamide synthetase, C domain WM2015_RS00790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WM2015_RS00790 PF02844 Phosphoribosylglycinamide synthetase, N domain WM2015_RS00795 PF02142 MGS-like domain WM2015_RS00795 PF01808 AICARFT/IMPCHase bienzyme WM2015_RS00800 PF02954 Bacterial regulatory protein, Fis family WM2015_RS00815 PF00156 Phosphoribosyl transferase domain WM2015_RS00820 PF00005 ABC transporter WM2015_RS00835 PF13181 Tetratricopeptide repeat WM2015_RS00840 PF03372 Endonuclease/Exonuclease/phosphatase family WM2015_RS00845 PF07690 Major Facilitator Superfamily WM2015_RS00875 PF03702 Anhydro-N-acetylmuramic acid kinase WM2015_RS00880 PF01476 LysM domain WM2015_RS00880 PF01551 Peptidase family M23 WM2015_RS00885 PF01479 S4 domain WM2015_RS00885 PF00579 tRNA synthetases class I (W and Y) WM2015_RS00900 PF02915 Rubrerythrin WM2015_RS00910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM2015_RS00910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM2015_RS00915 PF00764 Arginosuccinate synthase WM2015_RS00920 PF07687 Peptidase dimerisation domain WM2015_RS00920 PF01546 Peptidase family M20/M25/M40 WM2015_RS00925 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase WM2015_RS00925 PF00696 Amino acid kinase family WM2015_RS00930 PF01118 Semialdehyde dehydrogenase, NAD binding domain WM2015_RS00935 PF00206 Lyase WM2015_RS00970 PF00375 Sodium:dicarboxylate symporter family WM2015_RS00975 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM2015_RS00975 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain WM2015_RS00995 PF01741 Large-conductance mechanosensitive channel, MscL WM2015_RS01015 PF00672 HAMP domain WM2015_RS01015 PF16750 Sensor domain of 2-component histidine kinase WM2015_RS01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS01015 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS01020 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS01020 PF00072 Response regulator receiver domain WM2015_RS01030 PF00326 Prolyl oligopeptidase family WM2015_RS01030 PF07676 WD40-like Beta Propeller Repeat WM2015_RS01035 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ WM2015_RS01040 PF00529 HlyD membrane-fusion protein of T1SS WM2015_RS01040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM2015_RS01045 PF00873 AcrB/AcrD/AcrF family WM2015_RS01050 PF03073 TspO/MBR family WM2015_RS01055 PF05448 Acetyl xylan esterase (AXE1) WM2015_RS01065 PF00144 Beta-lactamase WM2015_RS01070 PF00211 Adenylate and Guanylate cyclase catalytic domain WM2015_RS01075 PF02798 Glutathione S-transferase, N-terminal domain WM2015_RS01080 PF01638 HxlR-like helix-turn-helix WM2015_RS01090 PF00069 Protein kinase domain WM2015_RS01090 PF03793 PASTA domain WM2015_RS01105 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS01105 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS01105 PF00563 EAL domain WM2015_RS01125 PF00378 Enoyl-CoA hydratase/isomerase WM2015_RS01140 PF00294 pfkB family carbohydrate kinase WM2015_RS01150 PF04085 rod shape-determining protein MreC WM2015_RS01160 PF00905 Penicillin binding protein transpeptidase domain WM2015_RS01160 PF03717 Penicillin-binding Protein dimerisation domain WM2015_RS01165 PF01098 Cell cycle protein WM2015_RS01170 PF13406 Transglycosylase SLT domain WM2015_RS01175 PF03330 Lytic transglycolase WM2015_RS01175 PF05036 Sporulation related domain WM2015_RS01180 PF07943 Penicillin-binding protein 5, C-terminal domain WM2015_RS01180 PF00768 D-alanyl-D-alanine carboxypeptidase WM2015_RS01185 PF04359 Protein of unknown function (DUF493) WM2015_RS01190 PF03099 Biotin/lipoate A/B protein ligase family WM2015_RS01195 PF00595 PDZ domain WM2015_RS01195 PF17804 Tail specific protease N-terminal domain WM2015_RS01195 PF11818 C-terminal domain of tail specific protease (DUF3340) WM2015_RS01195 PF03572 Peptidase family S41 WM2015_RS01200 PF18074 Primosomal protein N C-terminal domain WM2015_RS01200 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WM2015_RS01200 PF17764 3′ DNA-binding domain (3′BD) WM2015_RS01200 PF00271 Helicase conserved C-terminal domain WM2015_RS01200 PF00270 DEAD/DEAH box helicase WM2015_RS01215 PF01197 Ribosomal protein L31 WM2015_RS01220 PF17284 Spermidine synthase tetramerisation domain WM2015_RS01245 PF05567 Neisseria PilC beta-propeller domain WM2015_RS01255 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor WM2015_RS01255 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS01260 PF06580 Histidine kinase WM2015_RS01260 PF07694 5TMR of 5TMR-LYT WM2015_RS01270 PF04055 Radical SAM superfamily WM2015_RS01270 PF06969 HemN C-terminal domain WM2015_RS01275 PF01725 Ham1 family WM2015_RS01280 PF03725 3' exoribonuclease family, domain 2 WM2015_RS01280 PF01138 3' exoribonuclease family, domain 1 WM2015_RS01285 PF08340 Domain of unknown function (DUF1732) WM2015_RS01285 PF03755 YicC-like family, N-terminal region WM2015_RS01290 PF00625 Guanylate kinase WM2015_RS01295 PF01192 RNA polymerase Rpb6 WM2015_RS01300 PF02824 TGS domain WM2015_RS01300 PF04607 Region found in RelA / SpoT proteins WM2015_RS01300 PF13291 ACT domain WM2015_RS01305 PF01042 Endoribonuclease L-PSP WM2015_RS01310 PF17191 RecG wedge domain WM2015_RS01310 PF00271 Helicase conserved C-terminal domain WM2015_RS01310 PF00270 DEAD/DEAH box helicase WM2015_RS01315 PF00180 Isocitrate/isopropylmalate dehydrogenase WM2015_RS01315 PF18324 Hypothetical protein TT1725 WM2015_RS01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_RS01320 PF03466 LysR substrate binding domain WM2015_RS01330 PF00285 Citrate synthase, C-terminal domain WM2015_RS01340 PF09335 SNARE associated Golgi protein WM2015_RS01345 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS01345 PF05362 Lon protease (S16) C-terminal proteolytic domain WM2015_RS01345 PF02190 ATP-dependent protease La (LON) substrate-binding domain WM2015_RS01350 PF02875 Mur ligase family, glutamate ligase domain WM2015_RS01350 PF01225 Mur ligase family, catalytic domain WM2015_RS01350 PF08245 Mur ligase middle domain WM2015_RS01360 PF01206 Sulfurtransferase TusA WM2015_RS01370 PF00365 Phosphofructokinase WM2015_RS01375 PF01773 Na+ dependent nucleoside transporter N-terminus WM2015_RS01375 PF07670 Nucleoside recognition WM2015_RS01375 PF07662 Na+ dependent nucleoside transporter C-terminus WM2015_RS01380 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS01385 PF13180 PDZ domain WM2015_RS01395 PF04542 Sigma-70 region 2 WM2015_RS01395 PF08281 Sigma-70, region 4 WM2015_RS01410 PF01641 SelR domain WM2015_RS01415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WM2015_RS01420 PF02152 Dihydroneopterin aldolase WM2015_RS01425 PF00814 Glycoprotease family WM2015_RS01430 PF01165 Ribosomal protein S21 WM2015_RS01440 PF01807 CHC2 zinc finger WM2015_RS01440 PF10410 DnaB-helicase binding domain of primase WM2015_RS01440 PF08275 DNA primase catalytic core, N-terminal domain WM2015_RS01440 PF08278 DNA primase DnaG DnaB-binding WM2015_RS01445 PF04542 Sigma-70 region 2 WM2015_RS01445 PF04546 Sigma-70, non-essential region WM2015_RS01445 PF03979 Sigma-70 factor, region 1.1 WM2015_RS01445 PF00140 Sigma-70 factor, region 1.2 WM2015_RS01445 PF04539 Sigma-70 region 3 WM2015_RS01445 PF04545 Sigma-70, region 4 WM2015_RS01460 PF01208 Uroporphyrinogen decarboxylase (URO-D) WM2015_RS01465 PF01761 3-dehydroquinate synthase WM2015_RS01470 PF01202 Shikimate kinase WM2015_RS01485 PF01243 Pyridoxamine 5'-phosphate oxidase WM2015_RS01485 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WM2015_RS01490 PF12105 SpoU, rRNA methylase, C-terminal WM2015_RS01490 PF00588 SpoU rRNA Methylase family WM2015_RS01500 PF00270 DEAD/DEAH box helicase WM2015_RS01500 PF00271 Helicase conserved C-terminal domain WM2015_RS01500 PF16124 RecQ zinc-binding WM2015_RS01500 PF00570 HRDC domain WM2015_RS01500 PF09382 RQC domain WM2015_RS01505 PF00762 Ferrochelatase WM2015_RS01515 PF02416 mttA/Hcf106 family WM2015_RS01520 PF02416 mttA/Hcf106 family WM2015_RS01525 PF00902 Sec-independent protein translocase protein (TatC) WM2015_RS01535 PF03641 Possible lysine decarboxylase WM2015_RS01550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WM2015_RS01550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain WM2015_RS01560 PF01218 Coproporphyrinogen III oxidase WM2015_RS01565 PF13368 Topoisomerase C-terminal repeat WM2015_RS01565 PF01751 Toprim domain WM2015_RS01565 PF01131 DNA topoisomerase WM2015_RS01570 PF04361 Protein of unknown function (DUF494) WM2015_RS01575 PF17782 DprA winged helix domain WM2015_RS01575 PF02481 DNA recombination-mediator protein A WM2015_RS01585 PF01327 Polypeptide deformylase WM2015_RS01590 PF00551 Formyl transferase WM2015_RS01590 PF02911 Formyl transferase, C-terminal domain WM2015_RS01595 PF01189 16S rRNA methyltransferase RsmB/F WM2015_RS01595 PF01029 NusB family WM2015_RS01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS01605 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS01605 PF00989 PAS fold WM2015_RS01605 PF00672 HAMP domain WM2015_RS01610 PF00072 Response regulator receiver domain WM2015_RS01610 PF02954 Bacterial regulatory protein, Fis family WM2015_RS01610 PF00158 Sigma-54 interaction domain WM2015_RS01615 PF02254 TrkA-N domain WM2015_RS01615 PF02080 TrkA-C domain WM2015_RS01620 PF02386 Cation transport protein WM2015_RS01625 PF03481 Putative GTP-binding controlling metal-binding WM2015_RS01625 PF01300 Telomere recombination WM2015_RS01630 PF03279 Bacterial lipid A biosynthesis acyltransferase WM2015_RS01640 PF01170 Putative RNA methylase family UPF0020 WM2015_RS01640 PF02926 THUMP domain WM2015_RS01640 PF10672 S-adenosylmethionine-dependent methyltransferase WM2015_RS01645 PF00732 GMC oxidoreductase WM2015_RS01645 PF05199 GMC oxidoreductase WM2015_RS01655 PF00005 ABC transporter WM2015_RS01660 PF02687 FtsX-like permease family WM2015_RS01660 PF12704 MacB-like periplasmic core domain WM2015_RS01665 PF13533 Biotin-lipoyl like WM2015_RS01670 PF00561 alpha/beta hydrolase fold WM2015_RS01675 PF03600 Citrate transporter WM2015_RS01675 PF02080 TrkA-C domain WM2015_RS01680 PF01497 Periplasmic binding protein WM2015_RS01685 PF03600 Citrate transporter WM2015_RS01685 PF02080 TrkA-C domain WM2015_RS01690 PF03190 Protein of unknown function, DUF255 WM2015_RS01695 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS01700 PF10672 S-adenosylmethionine-dependent methyltransferase WM2015_RS01700 PF17785 PUA-like domain WM2015_RS01705 PF01790 Prolipoprotein diacylglyceryl transferase WM2015_RS01710 PF00303 Thymidylate synthase WM2015_RS01715 PF00186 Dihydrofolate reductase WM2015_RS01720 PF00149 Calcineurin-like phosphoesterase WM2015_RS01730 PF01488 Shikimate / quinate 5-dehydrogenase WM2015_RS01730 PF18317 Shikimate 5'-dehydrogenase C-terminal domain WM2015_RS01730 PF08501 Shikimate dehydrogenase substrate binding domain WM2015_RS01735 PF00490 Delta-aminolevulinic acid dehydratase WM2015_RS01740 PF05430 S-adenosyl-L-methionine-dependent methyltransferase WM2015_RS01740 PF01266 FAD dependent oxidoreductase WM2015_RS01755 PF01597 Glycine cleavage H-protein WM2015_RS01760 PF04493 Endonuclease V WM2015_RS01770 PF08335 GlnD PII-uridylyltransferase WM2015_RS01770 PF03710 Glutamate-ammonia ligase adenylyltransferase WM2015_RS01775 PF00118 TCP-1/cpn60 chaperonin family WM2015_RS01780 PF00166 Chaperonin 10 Kd subunit WM2015_RS01790 PF02683 Cytochrome C biogenesis protein transmembrane region WM2015_RS01790 PF11412 Disulphide bond corrector protein DsbC WM2015_RS01795 PF00578 AhpC/TSA family WM2015_RS01800 PF01220 Dehydroquinase class II WM2015_RS01805 PF00364 Biotin-requiring enzyme WM2015_RS01810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM2015_RS01810 PF02785 Biotin carboxylase C-terminal domain WM2015_RS01810 PF00289 Biotin carboxylase, N-terminal domain WM2015_RS01820 PF02895 Signal transducing histidine kinase, homodimeric domain WM2015_RS01820 PF01584 CheW-like domain WM2015_RS01820 PF01627 Hpt domain WM2015_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS01820 PF00072 Response regulator receiver domain WM2015_RS01825 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term WM2015_RS01825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WM2015_RS01835 PF00072 Response regulator receiver domain WM2015_RS01840 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WM2015_RS01840 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WM2015_RS01845 PF03544 Gram-negative bacterial TonB protein C-terminal WM2015_RS01850 PF02622 Uncharacterized ACR, COG1678 WM2015_RS01855 PF03652 Holliday junction resolvase WM2015_RS01860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WM2015_RS01860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WM2015_RS01865 PF02390 Putative methyltransferase WM2015_RS01870 PF03600 Citrate transporter WM2015_RS01870 PF02080 TrkA-C domain WM2015_RS01875 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM2015_RS01890 PF00361 Proton-conducting membrane transporter WM2015_RS01900 PF00361 Proton-conducting membrane transporter WM2015_RS01905 PF00361 Proton-conducting membrane transporter WM2015_RS01910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WM2015_RS01925 PF03334 Na+/H+ antiporter subunit WM2015_RS01940 PF06480 FtsH Extracellular WM2015_RS01940 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS01940 PF17862 AAA+ lid domain WM2015_RS01940 PF01434 Peptidase family M41 WM2015_RS01945 PF02773 S-adenosylmethionine synthetase, C-terminal domain WM2015_RS01945 PF02772 S-adenosylmethionine synthetase, central domain WM2015_RS01945 PF00438 S-adenosylmethionine synthetase, N-terminal domain WM2015_RS01950 PF05221 S-adenosyl-L-homocysteine hydrolase WM2015_RS01950 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WM2015_RS01955 PF02219 Methylenetetrahydrofolate reductase WM2015_RS01965 PF01112 Asparaginase WM2015_RS01975 PF00293 NUDIX domain WM2015_RS01985 PF01367 5'-3' exonuclease, C-terminal SAM fold WM2015_RS01985 PF00476 DNA polymerase family A WM2015_RS01985 PF01612 3'-5' exonuclease WM2015_RS01985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WM2015_RS01995 PF00595 PDZ domain WM2015_RS02000 PF13520 Amino acid permease WM2015_RS02005 PF03976 Polyphosphate kinase 2 (PPK2) WM2015_RS02015 PF06508 Queuosine biosynthesis protein QueC WM2015_RS02025 PF00348 Polyprenyl synthetase WM2015_RS02030 PF13525 Outer membrane lipoprotein WM2015_RS02035 PF00849 RNA pseudouridylate synthase WM2015_RS02040 PF02578 Multi-copper polyphenol oxidoreductase laccase WM2015_RS02045 PF01645 Conserved region in glutamate synthase WM2015_RS02055 PF06418 CTP synthase N-terminus WM2015_RS02055 PF00117 Glutamine amidotransferase class-I WM2015_RS02060 PF00793 DAHP synthetase I family WM2015_RS02065 PF00113 Enolase, C-terminal TIM barrel domain WM2015_RS02065 PF03952 Enolase, N-terminal domain WM2015_RS02090 PF01571 Aminomethyltransferase folate-binding domain WM2015_RS02090 PF08669 Glycine cleavage T-protein C-terminal barrel domain WM2015_RS02095 PF00710 Asparaginase, N-terminal WM2015_RS02095 PF17763 Glutaminase/Asparaginase C-terminal domain WM2015_RS02110 PF03358 NADPH-dependent FMN reductase WM2015_RS02115 PF03960 ArsC family WM2015_RS02120 PF03631 Virulence factor BrkB WM2015_RS02125 PF00578 AhpC/TSA family WM2015_RS02130 PF00708 Acylphosphatase WM2015_RS02145 PF01351 Ribonuclease HII WM2015_RS02150 PF02684 Lipid-A-disaccharide synthetase WM2015_RS02155 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WM2015_RS02155 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_RS02160 PF07977 FabA-like domain WM2015_RS02165 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WM2015_RS02165 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_RS02175 PF07244 Surface antigen variable number repeat WM2015_RS02175 PF01103 Surface antigen WM2015_RS02180 PF02163 Peptidase family M50 WM2015_RS02180 PF17820 PDZ domain WM2015_RS02190 PF01255 Putative undecaprenyl diphosphate synthase WM2015_RS02195 PF01765 Ribosome recycling factor WM2015_RS02200 PF00696 Amino acid kinase family WM2015_RS02205 PF00889 Elongation factor TS WM2015_RS02210 PF00318 Ribosomal protein S2 WM2015_RS02215 PF17773 UPF0176 acylphosphatase like domain WM2015_RS02215 PF00581 Rhodanese-like domain WM2015_RS02220 PF12795 Mechanosensitive ion channel porin domain WM2015_RS02220 PF12794 Mechanosensitive ion channel inner membrane domain 1 WM2015_RS02220 PF00924 Mechanosensitive ion channel WM2015_RS02225 PF04073 Aminoacyl-tRNA editing domain WM2015_RS02225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM2015_RS02225 PF03129 Anticodon binding domain WM2015_RS02235 PF01066 CDP-alcohol phosphatidyltransferase WM2015_RS02250 PF00795 Carbon-nitrogen hydrolase WM2015_RS02255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM2015_RS02260 PF00873 AcrB/AcrD/AcrF family WM2015_RS02265 PF00873 AcrB/AcrD/AcrF family WM2015_RS02275 PF00999 Sodium/hydrogen exchanger family WM2015_RS02275 PF02254 TrkA-N domain WM2015_RS02295 PF01322 Cytochrome C' WM2015_RS02305 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS02305 PF00114 Pilin (bacterial filament) WM2015_RS02315 PF00550 Phosphopantetheine attachment site WM2015_RS02315 PF00698 Acyl transferase domain WM2015_RS02315 PF08659 KR domain WM2015_RS02315 PF02801 Beta-ketoacyl synthase, C-terminal domain WM2015_RS02315 PF00109 Beta-ketoacyl synthase, N-terminal domain WM2015_RS02315 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS02315 PF14765 Polyketide synthase dehydratase WM2015_RS02315 PF08990 Erythronolide synthase docking WM2015_RS02315 PF16197 Ketoacyl-synthetase C-terminal extension WM2015_RS02330 PF00133 tRNA synthetases class I (I, L, M and V) WM2015_RS02330 PF08264 Anticodon-binding domain of tRNA WM2015_RS02330 PF10458 Valyl tRNA synthetase tRNA binding arm WM2015_RS02340 PF00883 Cytosol aminopeptidase family, catalytic domain WM2015_RS02340 PF02789 Cytosol aminopeptidase family, N-terminal domain WM2015_RS02365 PF01618 MotA/TolQ/ExbB proton channel family WM2015_RS02370 PF01618 MotA/TolQ/ExbB proton channel family WM2015_RS02375 PF02472 Biopolymer transport protein ExbD/TolR WM2015_RS02400 PF00589 Phage integrase family WM2015_RS02400 PF02899 Phage integrase, N-terminal SAM-like domain WM2015_RS02405 PF13098 Thioredoxin-like domain WM2015_RS02405 PF10411 Disulfide bond isomerase protein N-terminus WM2015_RS02410 PF02769 AIR synthase related protein, C-terminal domain WM2015_RS02410 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal WM2015_RS02410 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WM2015_RS02420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM2015_RS02420 PF00437 Type II/IV secretion system protein WM2015_RS02425 PF00482 Type II secretion system (T2SS), protein F WM2015_RS02430 PF08334 Type II secretion system (T2SS), protein G WM2015_RS02435 PF12019 Type II transport protein GspH WM2015_RS02440 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS02450 PF03934 Type II secretion system (T2SS), protein K WM2015_RS02470 PF03958 Bacterial type II/III secretion system short domain WM2015_RS02470 PF00263 Bacterial type II and III secretion system protein WM2015_RS02490 PF09312 SurA N-terminal domain WM2015_RS02490 PF00639 PPIC-type PPIASE domain WM2015_RS02495 PF01061 ABC-2 type transporter WM2015_RS02500 PF00005 ABC transporter WM2015_RS02510 PF08241 Methyltransferase domain WM2015_RS02530 PF12848 ABC transporter WM2015_RS02530 PF00005 ABC transporter WM2015_RS02535 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family WM2015_RS02540 PF00069 Protein kinase domain WM2015_RS02550 PF01336 OB-fold nucleic acid binding domain WM2015_RS02550 PF00152 tRNA synthetases class II (D, K and N) WM2015_RS02550 PF02938 GAD domain WM2015_RS02565 PF01709 Transcriptional regulator WM2015_RS02570 PF02075 Crossover junction endodeoxyribonuclease RuvC WM2015_RS02575 PF07499 RuvA, C-terminal domain WM2015_RS02575 PF01330 RuvA N terminal domain WM2015_RS02580 PF17864 RuvB AAA lid domain WM2015_RS02580 PF05491 RuvB C-terminal winged helix domain WM2015_RS02580 PF05496 Holliday junction DNA helicase RuvB P-loop domain WM2015_RS02585 PF03061 Thioesterase superfamily WM2015_RS02590 PF01618 MotA/TolQ/ExbB proton channel family WM2015_RS02595 PF02472 Biopolymer transport protein ExbD/TolR WM2015_RS02605 PF07676 WD40-like Beta Propeller Repeat WM2015_RS02605 PF04052 TolB amino-terminal domain WM2015_RS02610 PF00691 OmpA family WM2015_RS02620 PF04055 Radical SAM superfamily WM2015_RS02625 PF00483 Nucleotidyl transferase WM2015_RS02630 PF00459 Inositol monophosphatase family WM2015_RS02635 PF01507 Phosphoadenosine phosphosulfate reductase family WM2015_RS02640 PF00009 Elongation factor Tu GTP binding domain WM2015_RS02650 PF00675 Insulinase (Peptidase family M16) WM2015_RS02650 PF05193 Peptidase M16 inactive domain WM2015_RS02655 PF01625 Peptide methionine sulfoxide reductase WM2015_RS02660 PF01641 SelR domain WM2015_RS02665 PF00204 DNA gyrase B WM2015_RS02665 PF00986 DNA gyrase B subunit, carboxyl terminus WM2015_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS02665 PF01751 Toprim domain WM2015_RS02670 PF13654 AAA domain WM2015_RS02670 PF05362 Lon protease (S16) C-terminal proteolytic domain WM2015_RS02680 PF00696 Amino acid kinase family WM2015_RS02680 PF01842 ACT domain WM2015_RS02690 PF16697 Inner membrane component of T3SS, cytoplasmic domain WM2015_RS02695 PF00069 Protein kinase domain WM2015_RS02695 PF03793 PASTA domain WM2015_RS02700 PF00027 Cyclic nucleotide-binding domain WM2015_RS02700 PF00325 Bacterial regulatory proteins, crp family WM2015_RS02705 PF02675 S-adenosylmethionine decarboxylase WM2015_RS02720 PF00005 ABC transporter WM2015_RS02720 PF12848 ABC transporter WM2015_RS02730 PF00375 Sodium:dicarboxylate symporter family WM2015_RS02735 PF00313 'Cold-shock' DNA-binding domain WM2015_RS02750 PF03030 Inorganic H+ pyrophosphatase WM2015_RS02755 PF01569 PAP2 superfamily WM2015_RS02760 PF01242 6-pyruvoyl tetrahydropterin synthase WM2015_RS02770 PF08241 Methyltransferase domain WM2015_RS02785 PF04452 RNA methyltransferase WM2015_RS02790 PF00202 Aminotransferase class-III WM2015_RS02795 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS02795 PF08334 Type II secretion system (T2SS), protein G WM2015_RS02800 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS02800 PF12019 Type II transport protein GspH WM2015_RS02805 PF02501 Type II secretion system (T2SS), protein I WM2015_RS02805 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS02810 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS02810 PF11612 Type II secretion system (T2SS), protein J WM2015_RS02835 PF00459 Inositol monophosphatase family WM2015_RS02840 PF00293 NUDIX domain WM2015_RS02850 PF03653 Uncharacterised protein family (UPF0093) WM2015_RS02855 PF01521 Iron-sulphur cluster biosynthesis WM2015_RS02860 PF17113 Regulatory signalling modulator protein AmpE WM2015_RS02860 PF03186 CobD/Cbib protein WM2015_RS02875 PF12704 MacB-like periplasmic core domain WM2015_RS02875 PF02687 FtsX-like permease family WM2015_RS02880 PF00005 ABC transporter WM2015_RS02890 PF02261 Aspartate decarboxylase WM2015_RS02895 PF00342 Phosphoglucose isomerase WM2015_RS02905 PF05114 Protein of unknown function (DUF692) WM2015_RS02915 PF07681 DoxX WM2015_RS02920 PF00133 tRNA synthetases class I (I, L, M and V) WM2015_RS02920 PF13603 Leucyl-tRNA synthetase, Domain 2 WM2015_RS02920 PF08264 Anticodon-binding domain of tRNA WM2015_RS02935 PF01467 Cytidylyltransferase-like WM2015_RS02945 PF02590 Predicted SPOUT methyltransferase WM2015_RS02950 PF02545 Maf-like protein WM2015_RS02955 PF10150 Ribonuclease E/G family WM2015_RS02955 PF00575 S1 RNA binding domain WM2015_RS02965 PF01523 Putative modulator of DNA gyrase WM2015_RS02970 PF01523 Putative modulator of DNA gyrase WM2015_RS02990 PF04264 YceI-like domain WM2015_RS02995 PF00121 Triosephosphate isomerase WM2015_RS03000 PF03840 Preprotein translocase SecG subunit WM2015_RS03010 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WM2015_RS03015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WM2015_RS03020 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WM2015_RS03025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WM2015_RS03035 PF10531 SLBB domain WM2015_RS03035 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WM2015_RS03035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WM2015_RS03040 PF00384 Molybdopterin oxidoreductase WM2015_RS03040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM2015_RS03040 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WM2015_RS03045 PF00146 NADH dehydrogenase WM2015_RS03050 PF12838 4Fe-4S dicluster domain WM2015_RS03055 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WM2015_RS03060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WM2015_RS03065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WM2015_RS03065 PF00361 Proton-conducting membrane transporter WM2015_RS03070 PF00361 Proton-conducting membrane transporter WM2015_RS03070 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus WM2015_RS03080 PF00361 Proton-conducting membrane transporter WM2015_RS03085 PF01509 TruB family pseudouridylate synthase (N terminal domain) WM2015_RS03085 PF16198 tRNA pseudouridylate synthase B C-terminal domain WM2015_RS03085 PF09157 Pseudouridine synthase II TruB, C-terminal WM2015_RS03090 PF00814 Glycoprotease family WM2015_RS03110 PF13276 HTH-like domain WM2015_RS03110 PF13683 Integrase core domain WM2015_RS03120 PF04851 Type III restriction enzyme, res subunit WM2015_RS03120 PF13307 Helicase C-terminal domain WM2015_RS03130 PF14814 Bifunctional transglycosylase second domain WM2015_RS03130 PF00905 Penicillin binding protein transpeptidase domain WM2015_RS03130 PF00912 Transglycosylase WM2015_RS03135 PF00535 Glycosyl transferase family 2 WM2015_RS03145 PF00535 Glycosyl transferase family 2 WM2015_RS03150 PF13291 ACT domain WM2015_RS03150 PF04607 Region found in RelA / SpoT proteins WM2015_RS03150 PF02824 TGS domain WM2015_RS03180 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold WM2015_RS03180 PF00271 Helicase conserved C-terminal domain WM2015_RS03180 PF11898 Domain of unknown function (DUF3418) WM2015_RS03180 PF04408 Helicase associated domain (HA2) WM2015_RS03180 PF00270 DEAD/DEAH box helicase WM2015_RS03185 PF01212 Beta-eliminating lyase WM2015_RS03190 PF00005 ABC transporter WM2015_RS03190 PF12399 Branched-chain amino acid ATP-binding cassette transporter WM2015_RS03210 PF01380 SIS domain WM2015_RS03210 PF00571 CBS domain WM2015_RS03215 PF01699 Sodium/calcium exchanger protein WM2015_RS03225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WM2015_RS03235 PF02321 Outer membrane efflux protein WM2015_RS03240 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WM2015_RS03245 PF03279 Bacterial lipid A biosynthesis acyltransferase WM2015_RS03250 PF00535 Glycosyl transferase family 2 WM2015_RS03260 PF01259 SAICAR synthetase WM2015_RS03265 PF00834 Ribulose-phosphate 3 epimerase family WM2015_RS03275 PF04715 Anthranilate synthase component I, N terminal region WM2015_RS03275 PF00425 chorismate binding enzyme WM2015_RS03280 PF00117 Glutamine amidotransferase class-I WM2015_RS03285 PF02885 Glycosyl transferase family, helical bundle domain WM2015_RS03285 PF00591 Glycosyl transferase family, a/b domain WM2015_RS03290 PF00218 Indole-3-glycerol phosphate synthase WM2015_RS03295 PF00175 Oxidoreductase NAD-binding domain WM2015_RS03295 PF00111 2Fe-2S iron-sulfur cluster binding domain WM2015_RS03295 PF00970 Oxidoreductase FAD-binding domain WM2015_RS03305 PF01553 Acyltransferase WM2015_RS03325 PF00005 ABC transporter WM2015_RS03330 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS03335 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS03340 PF03232 Ubiquinone biosynthesis protein COQ7 WM2015_RS03355 PF00572 Ribosomal protein L13 WM2015_RS03360 PF00380 Ribosomal protein S9/S16 WM2015_RS03390 PF07730 Histidine kinase WM2015_RS03395 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS03395 PF00072 Response regulator receiver domain WM2015_RS03400 PF04389 Peptidase family M28 WM2015_RS03400 PF02225 PA domain WM2015_RS03410 PF01734 Patatin-like phospholipase WM2015_RS03420 PF00873 AcrB/AcrD/AcrF family WM2015_RS03430 PF00557 Metallopeptidase family M24 WM2015_RS03435 PF08335 GlnD PII-uridylyltransferase WM2015_RS03435 PF01909 Nucleotidyltransferase domain WM2015_RS03435 PF01966 HD domain WM2015_RS03435 PF01842 ACT domain WM2015_RS03440 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WM2015_RS03440 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_RS03440 PF14602 Hexapeptide repeat of succinyl-transferase WM2015_RS03445 PF03960 ArsC family WM2015_RS03450 PF01966 HD domain WM2015_RS03450 PF13286 Phosphohydrolase-associated domain WM2015_RS03480 PF13181 Tetratricopeptide repeat WM2015_RS03520 PF00069 Protein kinase domain WM2015_RS03520 PF03793 PASTA domain WM2015_RS03565 PF01432 Peptidase family M3 WM2015_RS03610 PF00563 EAL domain WM2015_RS03610 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS03610 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS03620 PF00375 Sodium:dicarboxylate symporter family WM2015_RS03640 PF00176 SNF2 family N-terminal domain WM2015_RS03640 PF00271 Helicase conserved C-terminal domain WM2015_RS03640 PF12419 SNF2 Helicase protein WM2015_RS03665 PF03976 Polyphosphate kinase 2 (PPK2) WM2015_RS03675 PF00069 Protein kinase domain WM2015_RS03675 PF03793 PASTA domain WM2015_RS03705 PF04542 Sigma-70 region 2 WM2015_RS03705 PF08281 Sigma-70, region 4 WM2015_RS03720 PF00082 Subtilase family WM2015_RS03730 PF02659 Putative manganese efflux pump WM2015_RS03745 PF00483 Nucleotidyl transferase WM2015_RS03750 PF00862 Sucrose synthase WM2015_RS03750 PF00534 Glycosyl transferases group 1 WM2015_RS03770 PF02667 Short chain fatty acid transporter WM2015_RS03775 PF11954 Domain of unknown function (DUF3471) WM2015_RS03775 PF00144 Beta-lactamase WM2015_RS03780 PF03193 RsgA GTPase WM2015_RS03800 PF00561 alpha/beta hydrolase fold WM2015_RS03800 PF08386 TAP-like protein WM2015_RS03810 PF14760 Rnk N-terminus WM2015_RS03810 PF01272 Transcription elongation factor, GreA/GreB, C-term WM2015_RS03815 PF02082 Transcriptional regulator WM2015_RS03825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_RS03830 PF00593 TonB dependent receptor WM2015_RS03830 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS03840 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase WM2015_RS03845 PF07681 DoxX WM2015_RS03850 PF03466 LysR substrate binding domain WM2015_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_RS03865 PF00583 Acetyltransferase (GNAT) family WM2015_RS03875 PF01810 LysE type translocator WM2015_RS03900 PF01850 PIN domain WM2015_RS03915 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) WM2015_RS03920 PF00173 Cytochrome b5-like Heme/Steroid binding domain WM2015_RS03925 PF00175 Oxidoreductase NAD-binding domain WM2015_RS03925 PF00970 Oxidoreductase FAD-binding domain WM2015_RS03925 PF00111 2Fe-2S iron-sulfur cluster binding domain WM2015_RS03935 PF13409 Glutathione S-transferase, N-terminal domain WM2015_RS03950 PF03793 PASTA domain WM2015_RS03950 PF00069 Protein kinase domain WM2015_RS03965 PF05016 ParE toxin of type II toxin-antitoxin system, parDE WM2015_RS04000 PF05973 Phage derived protein Gp49-like (DUF891) WM2015_RS04020 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system WM2015_RS04055 PF13443 Cro/C1-type HTH DNA-binding domain WM2015_RS04070 PF00211 Adenylate and Guanylate cyclase catalytic domain WM2015_RS04075 PF00144 Beta-lactamase WM2015_RS04080 PF01979 Amidohydrolase family WM2015_RS04105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_RS04110 PF07786 Protein of unknown function (DUF1624) WM2015_RS04110 PF04235 Protein of unknown function (DUF418) WM2015_RS04115 PF04235 Protein of unknown function (DUF418) WM2015_RS04135 PF00484 Carbonic anhydrase WM2015_RS04140 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS04170 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS04210 PF00593 TonB dependent receptor WM2015_RS04210 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS04230 PF03793 PASTA domain WM2015_RS04230 PF00069 Protein kinase domain WM2015_RS04235 PF00873 AcrB/AcrD/AcrF family WM2015_RS04240 PF13533 Biotin-lipoyl like WM2015_RS04260 PF00850 Histone deacetylase domain WM2015_RS04265 PF01923 Cobalamin adenosyltransferase WM2015_RS04315 PF00141 Peroxidase WM2015_RS04325 PF16177 Acetyl-coenzyme A synthetase N-terminus WM2015_RS04325 PF00501 AMP-binding enzyme WM2015_RS04325 PF13193 AMP-binding enzyme C-terminal domain WM2015_RS04340 PF00535 Glycosyl transferase family 2 WM2015_RS04340 PF13181 Tetratricopeptide repeat WM2015_RS04345 PF00005 ABC transporter WM2015_RS04350 PF00873 AcrB/AcrD/AcrF family WM2015_RS04355 PF13533 Biotin-lipoyl like WM2015_RS04365 PF01370 NAD dependent epimerase/dehydratase family WM2015_RS04380 PF04235 Protein of unknown function (DUF418) WM2015_RS04385 PF02371 Transposase IS116/IS110/IS902 family WM2015_RS04385 PF01548 Transposase WM2015_RS04435 PF00324 Amino acid permease WM2015_RS04450 PF00107 Zinc-binding dehydrogenase WM2015_RS04450 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS04460 PF10503 Esterase PHB depolymerase WM2015_RS04470 PF00970 Oxidoreductase FAD-binding domain WM2015_RS04470 PF00175 Oxidoreductase NAD-binding domain WM2015_RS04520 PF00171 Aldehyde dehydrogenase family WM2015_RS04525 PF00939 Sodium:sulfate symporter transmembrane region WM2015_RS04530 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS04530 PF17871 AAA lid domain WM2015_RS04530 PF02861 Clp amino terminal domain, pathogenicity island component WM2015_RS04530 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_RS04530 PF07724 AAA domain (Cdc48 subfamily) WM2015_RS04565 PF13638 PIN domain WM2015_RS04565 PF02562 PhoH-like protein WM2015_RS04570 PF00578 AhpC/TSA family WM2015_RS04575 PF00701 Dihydrodipicolinate synthetase family WM2015_RS04585 PF00037 4Fe-4S binding domain WM2015_RS04585 PF11953 Domain of unknown function (DUF3470) WM2015_RS04590 PF01743 Poly A polymerase head domain WM2015_RS04590 PF12627 Probable RNA and SrmB- binding site of polymerase A WM2015_RS04590 PF12626 Polymerase A arginine-rich C-terminus WM2015_RS04595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WM2015_RS04600 PF02548 Ketopantoate hydroxymethyltransferase WM2015_RS04605 PF02569 Pantoate-beta-alanine ligase WM2015_RS04610 PF13614 AAA domain WM2015_RS04610 PF00376 MerR family regulatory protein WM2015_RS04640 PF02080 TrkA-C domain WM2015_RS04640 PF03600 Citrate transporter WM2015_RS04655 PF04751 Protein of unknown function (DUF615) WM2015_RS04665 PF00905 Penicillin binding protein transpeptidase domain WM2015_RS04670 PF07238 PilZ domain WM2015_RS04670 PF00069 Protein kinase domain WM2015_RS04675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM2015_RS04680 PF00873 AcrB/AcrD/AcrF family WM2015_RS04690 PF04228 Putative neutral zinc metallopeptidase WM2015_RS04710 PF00005 ABC transporter WM2015_RS04720 PF01979 Amidohydrolase family WM2015_RS04725 PF07730 Histidine kinase WM2015_RS04730 PF00072 Response regulator receiver domain WM2015_RS04730 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS04745 PF01472 PUA domain WM2015_RS04745 PF00696 Amino acid kinase family WM2015_RS04750 PF00563 EAL domain WM2015_RS04750 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS04750 PF00360 Phytochrome region WM2015_RS04750 PF01590 GAF domain WM2015_RS04760 PF00144 Beta-lactamase WM2015_RS04765 PF03280 Proteobacterial lipase chaperone protein WM2015_RS04770 PF00561 alpha/beta hydrolase fold WM2015_RS04780 PF03793 PASTA domain WM2015_RS04780 PF00069 Protein kinase domain WM2015_RS04805 PF12697 Alpha/beta hydrolase family WM2015_RS04815 PF00171 Aldehyde dehydrogenase family WM2015_RS04820 PF01219 Prokaryotic diacylglycerol kinase WM2015_RS04825 PF01432 Peptidase family M3 WM2015_RS04830 PF00155 Aminotransferase class I and II WM2015_RS04835 PF00462 Glutaredoxin WM2015_RS04845 PF13380 CoA binding domain WM2015_RS04845 PF13607 Succinyl-CoA ligase like flavodoxin domain WM2015_RS04845 PF00583 Acetyltransferase (GNAT) family WM2015_RS04850 PF01464 Transglycosylase SLT domain WM2015_RS04850 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM2015_RS04855 PF02673 Bacitracin resistance protein BacA WM2015_RS04860 PF01676 Metalloenzyme superfamily WM2015_RS04865 PF02885 Glycosyl transferase family, helical bundle domain WM2015_RS04865 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain WM2015_RS04865 PF00591 Glycosyl transferase family, a/b domain WM2015_RS04870 PF01791 DeoC/LacD family aldolase WM2015_RS04880 PF00563 EAL domain WM2015_RS04880 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS04880 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS04890 PF01734 Patatin-like phospholipase WM2015_RS04905 PF13673 Acetyltransferase (GNAT) domain WM2015_RS04945 PF04247 Invasion gene expression up-regulator, SirB WM2015_RS04950 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain WM2015_RS04950 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain WM2015_RS05020 PF02534 Type IV secretory system Conjugative DNA transfer WM2015_RS05035 PF00873 AcrB/AcrD/AcrF family WM2015_RS05045 PF00440 Bacterial regulatory proteins, tetR family WM2015_RS05050 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS05050 PF00072 Response regulator receiver domain WM2015_RS05055 PF01636 Phosphotransferase enzyme family WM2015_RS05075 PF00270 DEAD/DEAH box helicase WM2015_RS05075 PF08494 DEAD/H associated WM2015_RS05075 PF00271 Helicase conserved C-terminal domain WM2015_RS05080 PF04675 DNA ligase N terminus WM2015_RS05080 PF01068 ATP dependent DNA ligase domain WM2015_RS05080 PF04679 ATP dependent DNA ligase C terminal region WM2015_RS05095 PF00326 Prolyl oligopeptidase family WM2015_RS05095 PF07676 WD40-like Beta Propeller Repeat WM2015_RS05110 PF05684 Protein of unknown function (DUF819) WM2015_RS05125 PF00892 EamA-like transporter family WM2015_RS05135 PF00571 CBS domain WM2015_RS05135 PF01769 Divalent cation transporter WM2015_RS05135 PF03448 MgtE intracellular N domain WM2015_RS05165 PF06974 Protein of unknown function (DUF1298) WM2015_RS05165 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain WM2015_RS05180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WM2015_RS05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS05185 PF01493 GXGXG motif WM2015_RS05185 PF04898 Glutamate synthase central domain WM2015_RS05185 PF00310 Glutamine amidotransferases class-II WM2015_RS05185 PF01645 Conserved region in glutamate synthase WM2015_RS05190 PF07884 Vitamin K epoxide reductase family WM2015_RS05215 PF03167 Uracil DNA glycosylase superfamily WM2015_RS05225 PF01494 FAD binding domain WM2015_RS05230 PF01494 FAD binding domain WM2015_RS05235 PF05195 Aminopeptidase P, N-terminal domain WM2015_RS05235 PF00557 Metallopeptidase family M24 WM2015_RS05240 PF03695 Uncharacterised protein family (UPF0149) WM2015_RS05250 PF05164 Cell division protein ZapA WM2015_RS05255 PF01812 5-formyltetrahydrofolate cyclo-ligase family WM2015_RS05265 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) WM2015_RS05270 PF00593 TonB dependent receptor WM2015_RS05270 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS05275 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS05275 PF05230 MASE2 domain WM2015_RS05280 PF01207 Dihydrouridine synthase (Dus) WM2015_RS05295 PF00072 Response regulator receiver domain WM2015_RS05295 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS05300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS05305 PF03819 MazG nucleotide pyrophosphohydrolase domain WM2015_RS05335 PF03989 DNA gyrase C-terminal domain, beta-propeller WM2015_RS05335 PF00521 DNA gyrase/topoisomerase IV, subunit A WM2015_RS05355 PF00575 S1 RNA binding domain WM2015_RS05355 PF17674 HHH domain WM2015_RS05355 PF16921 Tex protein YqgF-like domain WM2015_RS05355 PF09371 Tex-like protein N-terminal domain WM2015_RS05365 PF00069 Protein kinase domain WM2015_RS05365 PF03793 PASTA domain WM2015_RS05370 PF00082 Subtilase family WM2015_RS05380 PF00691 OmpA family WM2015_RS05380 PF01389 OmpA-like transmembrane domain WM2015_RS05385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_RS05385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM2015_RS05390 PF00069 Protein kinase domain WM2015_RS05390 PF03793 PASTA domain WM2015_RS05420 PF00069 Protein kinase domain WM2015_RS05425 PF03793 PASTA domain WM2015_RS05425 PF00069 Protein kinase domain WM2015_RS05435 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_RS05470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM2015_RS05470 PF00364 Biotin-requiring enzyme WM2015_RS05470 PF02785 Biotin carboxylase C-terminal domain WM2015_RS05470 PF00289 Biotin carboxylase, N-terminal domain WM2015_RS05475 PF00378 Enoyl-CoA hydratase/isomerase WM2015_RS05480 PF01039 Carboxyl transferase domain WM2015_RS05490 PF00312 Ribosomal protein S15 WM2015_RS05495 PF00013 KH domain WM2015_RS05495 PF01138 3' exoribonuclease family, domain 1 WM2015_RS05495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WM2015_RS05495 PF03725 3' exoribonuclease family, domain 2 WM2015_RS05495 PF00575 S1 RNA binding domain WM2015_RS05505 PF00691 OmpA family WM2015_RS05505 PF01389 OmpA-like transmembrane domain WM2015_RS05510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WM2015_RS05520 PF05362 Lon protease (S16) C-terminal proteolytic domain WM2015_RS05520 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS05520 PF02190 ATP-dependent protease La (LON) substrate-binding domain WM2015_RS05525 PF00561 alpha/beta hydrolase fold WM2015_RS05535 PF00892 EamA-like transporter family WM2015_RS05545 PF01809 Putative membrane protein insertion efficiency factor WM2015_RS05550 PF01258 Prokaryotic dksA/traR C4-type zinc finger WM2015_RS05555 PF05736 OprF membrane domain WM2015_RS05555 PF00691 OmpA family WM2015_RS05560 PF02657 Fe-S metabolism associated domain WM2015_RS05565 PF09190 DALR domain WM2015_RS05565 PF01406 tRNA synthetases class I (C) catalytic domain WM2015_RS05570 PF00557 Metallopeptidase family M24 WM2015_RS05580 PF00210 Ferritin-like domain WM2015_RS05590 PF01966 HD domain WM2015_RS05590 PF11871 Domain of unknown function (DUF3391) WM2015_RS05600 PF00330 Aconitase family (aconitate hydratase) WM2015_RS05600 PF00694 Aconitase C-terminal domain WM2015_RS05605 PF04303 PrpF protein WM2015_RS05625 PF04055 Radical SAM superfamily WM2015_RS05630 PF07676 WD40-like Beta Propeller Repeat WM2015_RS05640 PF12705 PD-(D/E)XK nuclease superfamily WM2015_RS05640 PF00580 UvrD/REP helicase N-terminal domain WM2015_RS05640 PF13361 UvrD-like helicase C-terminal domain WM2015_RS05665 PF03358 NADPH-dependent FMN reductase WM2015_RS05670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_RS05670 PF03466 LysR substrate binding domain WM2015_RS05680 PF00892 EamA-like transporter family WM2015_RS05710 PF00330 Aconitase family (aconitate hydratase) WM2015_RS05710 PF06434 Aconitate hydratase 2 N-terminus WM2015_RS05710 PF11791 Aconitate B N-terminal domain WM2015_RS05720 PF03965 Penicillinase repressor WM2015_RS05800 PF00884 Sulfatase WM2015_RS05800 PF16347 Domain of unknown function (DUF4976) WM2015_RS05840 PF01266 FAD dependent oxidoreductase WM2015_RS05865 PF03793 PASTA domain WM2015_RS05865 PF00069 Protein kinase domain WM2015_RS05905 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_RS05905 PF07676 WD40-like Beta Propeller Repeat WM2015_RS05905 PF00326 Prolyl oligopeptidase family WM2015_RS05915 PF07504 Fungalysin/Thermolysin Propeptide Motif WM2015_RS05915 PF02868 Thermolysin metallopeptidase, alpha-helical domain WM2015_RS05915 PF01447 Thermolysin metallopeptidase, catalytic domain WM2015_RS05915 PF01483 Proprotein convertase P-domain WM2015_RS05940 PF03606 C4-dicarboxylate anaerobic carrier WM2015_RS05945 PF00266 Aminotransferase class-V WM2015_RS05970 PF02627 Carboxymuconolactone decarboxylase family WM2015_RS05990 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WM2015_RS05990 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WM2015_RS05990 PF06827 Zinc finger found in FPG and IleRS WM2015_RS06010 PF17863 AAA lid domain WM2015_RS06010 PF07726 ATPase family associated with various cellular activities (AAA) WM2015_RS06045 PF02222 ATP-grasp domain WM2015_RS06060 PF00698 Acyl transferase domain WM2015_RS06060 PF00109 Beta-ketoacyl synthase, N-terminal domain WM2015_RS06060 PF02801 Beta-ketoacyl synthase, C-terminal domain WM2015_RS06060 PF00550 Phosphopantetheine attachment site WM2015_RS06060 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS06060 PF08659 KR domain WM2015_RS06060 PF16197 Ketoacyl-synthetase C-terminal extension WM2015_RS06060 PF14765 Polyketide synthase dehydratase WM2015_RS06065 PF00293 NUDIX domain WM2015_RS06065 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain WM2015_RS06065 PF09297 NADH pyrophosphatase zinc ribbon domain WM2015_RS06075 PF00487 Fatty acid desaturase WM2015_RS06080 PF00175 Oxidoreductase NAD-binding domain WM2015_RS06080 PF00970 Oxidoreductase FAD-binding domain WM2015_RS06080 PF00042 Globin WM2015_RS06085 PF00440 Bacterial regulatory proteins, tetR family WM2015_RS06090 PF00141 Peroxidase WM2015_RS06130 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_RS06130 PF00326 Prolyl oligopeptidase family WM2015_RS06135 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS06135 PF17151 Periplasmic sensor domain WM2015_RS06140 PF09285 Elongation factor P, C-terminal WM2015_RS06140 PF01132 Elongation factor P (EF-P) OB domain WM2015_RS06140 PF08207 Elongation factor P (EF-P) KOW-like domain WM2015_RS06150 PF04993 TfoX N-terminal domain WM2015_RS06165 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS06170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_RS06170 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS06170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS06175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WM2015_RS06175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WM2015_RS06195 PF01022 Bacterial regulatory protein, arsR family WM2015_RS06200 PF02310 B12 binding domain WM2015_RS06200 PF01642 Methylmalonyl-CoA mutase WM2015_RS06215 PF00854 POT family WM2015_RS06220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WM2015_RS06220 PF07733 Bacterial DNA polymerase III alpha NTPase domain WM2015_RS06220 PF02811 PHP domain WM2015_RS06220 PF14579 Helix-hairpin-helix motif WM2015_RS06220 PF01336 OB-fold nucleic acid binding domain WM2015_RS06230 PF03793 PASTA domain WM2015_RS06230 PF00069 Protein kinase domain WM2015_RS06240 PF01556 DnaJ C terminal domain WM2015_RS06240 PF00226 DnaJ domain WM2015_RS06255 PF00270 DEAD/DEAH box helicase WM2015_RS06255 PF00271 Helicase conserved C-terminal domain WM2015_RS06255 PF03880 DbpA RNA binding domain WM2015_RS06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS06265 PF00072 Response regulator receiver domain WM2015_RS06265 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS06270 PF00092 von Willebrand factor type A domain WM2015_RS06280 PF04055 Radical SAM superfamily WM2015_RS06290 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WM2015_RS06290 PF00326 Prolyl oligopeptidase family WM2015_RS06300 PF03793 PASTA domain WM2015_RS06300 PF00069 Protein kinase domain WM2015_RS06310 PF00072 Response regulator receiver domain WM2015_RS06310 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS06350 PF05697 Bacterial trigger factor protein (TF) WM2015_RS06350 PF05698 Bacterial trigger factor protein (TF) C-terminus WM2015_RS06350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_RS06355 PF00574 Clp protease WM2015_RS06360 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_RS06360 PF06689 ClpX C4-type zinc finger WM2015_RS06360 PF07724 AAA domain (Cdc48 subfamily) WM2015_RS06365 PF02190 ATP-dependent protease La (LON) substrate-binding domain WM2015_RS06365 PF05362 Lon protease (S16) C-terminal proteolytic domain WM2015_RS06365 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS06370 PF00216 Bacterial DNA-binding protein WM2015_RS06385 PF13145 PPIC-type PPIASE domain WM2015_RS06395 PF03358 NADPH-dependent FMN reductase WM2015_RS06405 PF01612 3'-5' exonuclease WM2015_RS06405 PF00570 HRDC domain WM2015_RS06410 PF03781 Sulfatase-modifying factor enzyme 1 WM2015_RS06410 PF00069 Protein kinase domain WM2015_RS06415 PF11737 Protein of unknown function (DUF3300) WM2015_RS06430 PF00561 alpha/beta hydrolase fold WM2015_RS06435 PF03922 OmpW family WM2015_RS06440 PF04244 Deoxyribodipyrimidine photo-lyase-related protein WM2015_RS06445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WM2015_RS06445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WM2015_RS06455 PF00731 AIR carboxylase WM2015_RS06460 PF02222 ATP-grasp domain WM2015_RS06460 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WM2015_RS06465 PF08402 TOBE domain WM2015_RS06465 PF00005 ABC transporter WM2015_RS06470 PF00202 Aminotransferase class-III WM2015_RS06475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WM2015_RS06475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WM2015_RS06480 PF00929 Exonuclease WM2015_RS06495 PF00730 HhH-GPD superfamily base excision DNA repair protein WM2015_RS06495 PF00633 Helix-hairpin-helix motif WM2015_RS06495 PF10576 Iron-sulfur binding domain of endonuclease III WM2015_RS06500 PF02508 Rnf-Nqr subunit, membrane protein WM2015_RS06505 PF04205 FMN-binding domain WM2015_RS06510 PF03116 NQR2, RnfD, RnfE family WM2015_RS06520 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WM2015_RS06520 PF12838 4Fe-4S dicluster domain WM2015_RS06520 PF13375 RnfC Barrel sandwich hybrid domain WM2015_RS06520 PF10531 SLBB domain WM2015_RS06525 PF04060 Putative Fe-S cluster WM2015_RS06540 PF02508 Rnf-Nqr subunit, membrane protein WM2015_RS06545 PF09334 tRNA synthetases class I (M) WM2015_RS06545 PF01588 Putative tRNA binding domain WM2015_RS06550 PF10609 NUBPL iron-transfer P-loop NTPase WM2015_RS06555 PF00692 dUTPase WM2015_RS06560 PF13180 PDZ domain WM2015_RS06560 PF17820 PDZ domain WM2015_RS06565 PF00355 Rieske [2Fe-2S] domain WM2015_RS06565 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WM2015_RS06570 PF00033 Cytochrome b/b6/petB WM2015_RS06570 PF00032 Cytochrome b(C-terminal)/b6/petD WM2015_RS06575 PF02167 Cytochrome C1 family WM2015_RS06580 PF02798 Glutathione S-transferase, N-terminal domain WM2015_RS06580 PF00043 Glutathione S-transferase, C-terminal domain WM2015_RS06585 PF04386 Stringent starvation protein B WM2015_RS06600 PF01975 Survival protein SurE WM2015_RS06610 PF09335 SNARE associated Golgi protein WM2015_RS06615 PF01551 Peptidase family M23 WM2015_RS06615 PF01476 LysM domain WM2015_RS06620 PF02082 Transcriptional regulator WM2015_RS06625 PF11741 AMIN domain WM2015_RS06625 PF01520 N-acetylmuramoyl-L-alanine amidase WM2015_RS06630 PF08676 MutL C terminal dimerisation domain WM2015_RS06630 PF01119 DNA mismatch repair protein, C-terminal domain WM2015_RS06640 PF17209 Hfq protein WM2015_RS06645 PF01926 50S ribosome-binding GTPase WM2015_RS06645 PF16360 GTP-binding GTPase Middle Region WM2015_RS06645 PF13167 GTP-binding GTPase N-terminal WM2015_RS06650 PF12221 Bacterial membrane protein N terminal WM2015_RS06650 PF01145 SPFH domain / Band 7 family WM2015_RS06655 PF01145 SPFH domain / Band 7 family WM2015_RS06660 PF00709 Adenylosuccinate synthetase WM2015_RS06665 PF02403 Seryl-tRNA synthetase N-terminal domain WM2015_RS06665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM2015_RS06670 PF00266 Aminotransferase class-V WM2015_RS06675 PF00800 Prephenate dehydratase WM2015_RS06675 PF01842 ACT domain WM2015_RS06675 PF01817 Chorismate mutase type II WM2015_RS06680 PF00155 Aminotransferase class I and II WM2015_RS06685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WM2015_RS06690 PF02224 Cytidylate kinase WM2015_RS06695 PF00575 S1 RNA binding domain WM2015_RS06700 PF00216 Bacterial DNA-binding protein WM2015_RS06710 PF18073 Rubredoxin metal binding domain WM2015_RS06715 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WM2015_RS06715 PF00953 Glycosyl transferase family 4 WM2015_RS06720 PF02719 Polysaccharide biosynthesis protein WM2015_RS06730 PF01106 NifU-like domain WM2015_RS06730 PF01521 Iron-sulphur cluster biosynthesis WM2015_RS06735 PF00034 Cytochrome c WM2015_RS06740 PF00034 Cytochrome c WM2015_RS06745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_RS06745 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS06745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS06750 PF02779 Transketolase, pyrimidine binding domain WM2015_RS06750 PF00364 Biotin-requiring enzyme WM2015_RS06750 PF02780 Transketolase, C-terminal domain WM2015_RS06755 PF00563 EAL domain WM2015_RS06755 PF12792 CSS motif domain associated with EAL WM2015_RS06760 PF00743 Flavin-binding monooxygenase-like WM2015_RS06770 PF00155 Aminotransferase class I and II WM2015_RS06775 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS06775 PF00107 Zinc-binding dehydrogenase WM2015_RS06780 PF02146 Sir2 family WM2015_RS06785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WM2015_RS06785 PF00205 Thiamine pyrophosphate enzyme, central domain WM2015_RS06785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WM2015_RS06795 PF00158 Sigma-54 interaction domain WM2015_RS06795 PF02954 Bacterial regulatory protein, Fis family WM2015_RS06800 PF18073 Rubredoxin metal binding domain WM2015_RS06810 PF05958 tRNA (Uracil-5-)-methyltransferase WM2015_RS06815 PF00933 Glycosyl hydrolase family 3 N terminal domain WM2015_RS06820 PF00924 Mechanosensitive ion channel WM2015_RS06830 PF01048 Phosphorylase superfamily WM2015_RS06855 PF05190 MutS family domain IV WM2015_RS06855 PF05192 MutS domain III WM2015_RS06855 PF05188 MutS domain II WM2015_RS06855 PF01624 MutS domain I WM2015_RS06855 PF00488 MutS domain V WM2015_RS06860 PF02464 Competence-damaged protein WM2015_RS06865 PF02834 LigT like Phosphoesterase WM2015_RS06870 PF00154 recA bacterial DNA recombination protein WM2015_RS06875 PF02631 RecX family WM2015_RS06880 PF02272 DHHA1 domain WM2015_RS06880 PF01411 tRNA synthetases class II (A) WM2015_RS06880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WM2015_RS06890 PF07883 Cupin domain WM2015_RS06900 PF00398 Ribosomal RNA adenine dimethylase WM2015_RS06905 PF00571 CBS domain WM2015_RS06905 PF00478 IMP dehydrogenase / GMP reductase domain WM2015_RS06910 PF00958 GMP synthase C terminal domain WM2015_RS06910 PF02540 NAD synthase WM2015_RS06910 PF00117 Glutamine amidotransferase class-I WM2015_RS06915 PF14437 MafB19-like deaminase WM2015_RS06920 PF01432 Peptidase family M3 WM2015_RS06940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_RS06940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS06940 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS06945 PF05088 Bacterial NAD-glutamate dehydrogenase WM2015_RS06950 PF01513 ATP-NAD kinase WM2015_RS06965 PF01979 Amidohydrolase family WM2015_RS06980 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS06985 PF00919 Uncharacterized protein family UPF0004 WM2015_RS06985 PF18693 TRAM domain WM2015_RS06985 PF04055 Radical SAM superfamily WM2015_RS06990 PF01497 Periplasmic binding protein WM2015_RS07005 PF12792 CSS motif domain associated with EAL WM2015_RS07005 PF00563 EAL domain WM2015_RS07020 PF05649 Peptidase family M13 WM2015_RS07020 PF01431 Peptidase family M13 WM2015_RS07025 PF01966 HD domain WM2015_RS07025 PF00672 HAMP domain WM2015_RS07030 PF00072 Response regulator receiver domain WM2015_RS07040 PF00474 Sodium:solute symporter family WM2015_RS07045 PF00005 ABC transporter WM2015_RS07045 PF00664 ABC transporter transmembrane region WM2015_RS07050 PF00005 ABC transporter WM2015_RS07050 PF00664 ABC transporter transmembrane region WM2015_RS07055 PF02322 Cytochrome bd terminal oxidase subunit II WM2015_RS07060 PF01654 Cytochrome bd terminal oxidase subunit I WM2015_RS07065 PF01894 Uncharacterised protein family UPF0047 WM2015_RS07070 PF03462 PCRF domain WM2015_RS07070 PF00472 RF-1 domain WM2015_RS07075 PF01488 Shikimate / quinate 5-dehydrogenase WM2015_RS07075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WM2015_RS07075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WM2015_RS07085 PF03550 Outer membrane lipoprotein LolB WM2015_RS07095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WM2015_RS07095 PF14572 Phosphoribosyl synthetase-associated domain WM2015_RS07100 PF03606 C4-dicarboxylate anaerobic carrier WM2015_RS07110 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_RS07115 PF01037 Lrp/AsnC ligand binding domain WM2015_RS07120 PF00694 Aconitase C-terminal domain WM2015_RS07120 PF00330 Aconitase family (aconitate hydratase) WM2015_RS07140 PF00069 Protein kinase domain WM2015_RS07140 PF03793 PASTA domain WM2015_RS07145 PF04356 Protein of unknown function (DUF489) WM2015_RS07155 PF03466 LysR substrate binding domain WM2015_RS07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_RS07160 PF01274 Malate synthase WM2015_RS07165 PF00463 Isocitrate lyase family WM2015_RS07170 PF02617 ATP-dependent Clp protease adaptor protein ClpS WM2015_RS07175 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_RS07175 PF02861 Clp amino terminal domain, pathogenicity island component WM2015_RS07175 PF17871 AAA lid domain WM2015_RS07175 PF07724 AAA domain (Cdc48 subfamily) WM2015_RS07175 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS07180 PF01176 Translation initiation factor 1A / IF-1 WM2015_RS07185 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase WM2015_RS07210 PF00069 Protein kinase domain WM2015_RS07220 PF00472 RF-1 domain WM2015_RS07220 PF03462 PCRF domain WM2015_RS07225 PF01336 OB-fold nucleic acid binding domain WM2015_RS07225 PF00152 tRNA synthetases class II (D, K and N) WM2015_RS07235 PF00149 Calcineurin-like phosphoesterase WM2015_RS07240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM2015_RS07245 PF01008 Initiation factor 2 subunit family WM2015_RS07250 PF10415 Fumarase C C-terminus WM2015_RS07250 PF00206 Lyase WM2015_RS07255 PF03449 Transcription elongation factor, N-terminal WM2015_RS07255 PF01272 Transcription elongation factor, GreA/GreB, C-term WM2015_RS07260 PF00011 Hsp20/alpha crystallin family WM2015_RS07270 PF01694 Rhomboid family WM2015_RS07285 PF03588 Leucyl/phenylalanyl-tRNA protein transferase WM2015_RS07295 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS07300 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WM2015_RS07300 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WM2015_RS07305 PF17854 FtsK alpha domain WM2015_RS07305 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WM2015_RS07305 PF01580 FtsK/SpoIIIE family WM2015_RS07305 PF09397 Ftsk gamma domain WM2015_RS07310 PF03548 Outer membrane lipoprotein carrier protein LolA WM2015_RS07340 PF00005 ABC transporter WM2015_RS07340 PF00664 ABC transporter transmembrane region WM2015_RS07360 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS07360 PF00072 Response regulator receiver domain WM2015_RS07385 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 WM2015_RS07385 PF01610 Transposase WM2015_RS07385 PF13542 Helix-turn-helix domain of transposase family ISL3 WM2015_RS07410 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) WM2015_RS07415 PF06052 3-hydroxyanthranilic acid dioxygenase WM2015_RS07420 PF01042 Endoribonuclease L-PSP WM2015_RS07425 PF00171 Aldehyde dehydrogenase family WM2015_RS07435 PF01336 OB-fold nucleic acid binding domain WM2015_RS07435 PF00152 tRNA synthetases class II (D, K and N) WM2015_RS07440 PF01521 Iron-sulphur cluster biosynthesis WM2015_RS07450 PF01250 Ribosomal protein S6 WM2015_RS07455 PF01084 Ribosomal protein S18 WM2015_RS07460 PF03948 Ribosomal protein L9, C-terminal domain WM2015_RS07460 PF01281 Ribosomal protein L9, N-terminal domain WM2015_RS07465 PF00772 DnaB-like helicase N terminal domain WM2015_RS07465 PF03796 DnaB-like helicase C terminal domain WM2015_RS07470 PF01168 Alanine racemase, N-terminal domain WM2015_RS07470 PF00842 Alanine racemase, C-terminal domain WM2015_RS07475 PF04055 Radical SAM superfamily WM2015_RS07475 PF00919 Uncharacterized protein family UPF0004 WM2015_RS07475 PF01938 TRAM domain WM2015_RS07480 PF02562 PhoH-like protein WM2015_RS07485 PF02130 Uncharacterized protein family UPF0054 WM2015_RS07490 PF03471 Transporter associated domain WM2015_RS07490 PF00571 CBS domain WM2015_RS07510 PF01968 Hydantoinase/oxoprolinase WM2015_RS07510 PF05378 Hydantoinase/oxoprolinase N-terminal region WM2015_RS07520 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS07520 PF00107 Zinc-binding dehydrogenase WM2015_RS07530 PF06167 Glucose-regulated metallo-peptidase M90 WM2015_RS07535 PF00501 AMP-binding enzyme WM2015_RS07545 PF01546 Peptidase family M20/M25/M40 WM2015_RS07545 PF07687 Peptidase dimerisation domain WM2015_RS07560 PF00535 Glycosyl transferase family 2 WM2015_RS07575 PF13520 Amino acid permease WM2015_RS07595 PF00005 ABC transporter WM2015_RS07595 PF16326 ABC transporter C-terminal domain WM2015_RS07595 PF12848 ABC transporter WM2015_RS07600 PF00690 Cation transporter/ATPase, N-terminus WM2015_RS07600 PF00689 Cation transporting ATPase, C-terminus WM2015_RS07615 PF18500 CadC C-terminal domain 1 WM2015_RS07615 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS07625 PF03461 TRCF domain WM2015_RS07625 PF00271 Helicase conserved C-terminal domain WM2015_RS07625 PF00270 DEAD/DEAH box helicase WM2015_RS07625 PF02559 CarD-like/TRCF domain WM2015_RS07625 PF17757 UvrB interaction domain WM2015_RS07635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_RS07640 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain WM2015_RS07640 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain WM2015_RS07645 PF00579 tRNA synthetases class I (W and Y) WM2015_RS07650 PF01557 Fumarylacetoacetate (FAA) hydrolase family WM2015_RS07675 PF04107 Glutamate-cysteine ligase family 2(GCS2) WM2015_RS07685 PF00521 DNA gyrase/topoisomerase IV, subunit A WM2015_RS07685 PF03989 DNA gyrase C-terminal domain, beta-propeller WM2015_RS07695 PF00082 Subtilase family WM2015_RS07695 PF05922 Peptidase inhibitor I9 WM2015_RS07700 PF14684 Tricorn protease C1 domain WM2015_RS07700 PF03572 Peptidase family S41 WM2015_RS07700 PF07676 WD40-like Beta Propeller Repeat WM2015_RS07700 PF14685 Tricorn protease PDZ domain WM2015_RS07705 PF02347 Glycine cleavage system P-protein WM2015_RS07710 PF01040 UbiA prenyltransferase family WM2015_RS07715 PF02628 Cytochrome oxidase assembly protein WM2015_RS07735 PF00462 Glutaredoxin WM2015_RS07735 PF08534 Redoxin WM2015_RS07740 PF00072 Response regulator receiver domain WM2015_RS07745 PF00107 Zinc-binding dehydrogenase WM2015_RS07745 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS07750 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS07750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_RS07755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM2015_RS07755 PF00364 Biotin-requiring enzyme WM2015_RS07755 PF02817 e3 binding domain WM2015_RS07760 PF16078 2-oxoglutarate dehydrogenase N-terminus WM2015_RS07760 PF16870 2-oxoglutarate dehydrogenase C-terminal WM2015_RS07760 PF00676 Dehydrogenase E1 component WM2015_RS07760 PF02779 Transketolase, pyrimidine binding domain WM2015_RS07765 PF08007 Cupin superfamily protein WM2015_RS07770 PF00206 Lyase WM2015_RS07770 PF08328 Adenylosuccinate lyase C-terminal WM2015_RS07775 PF02525 Flavodoxin-like fold WM2015_RS07780 PF00795 Carbon-nitrogen hydrolase WM2015_RS07795 PF00106 short chain dehydrogenase WM2015_RS07800 PF03193 RsgA GTPase WM2015_RS07805 PF00929 Exonuclease WM2015_RS07810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WM2015_RS07810 PF02896 PEP-utilising enzyme, TIM barrel domain WM2015_RS07810 PF00391 PEP-utilising enzyme, mobile domain WM2015_RS07815 PF03618 Kinase/pyrophosphorylase WM2015_RS07825 PF00117 Glutamine amidotransferase class-I WM2015_RS07825 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WM2015_RS07830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM2015_RS07830 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WM2015_RS07830 PF02142 MGS-like domain WM2015_RS07835 PF01272 Transcription elongation factor, GreA/GreB, C-term WM2015_RS07835 PF03449 Transcription elongation factor, N-terminal WM2015_RS07845 PF17768 RecJ OB domain WM2015_RS07845 PF02272 DHHA1 domain WM2015_RS07845 PF01368 DHH family WM2015_RS07850 PF00334 Nucleoside diphosphate kinase WM2015_RS07855 PF04055 Radical SAM superfamily WM2015_RS07870 PF13393 Histidyl-tRNA synthetase WM2015_RS07870 PF03129 Anticodon binding domain WM2015_RS07875 PF09976 Tetratricopeptide repeat-like domain WM2015_RS07880 PF13360 PQQ-like domain WM2015_RS07880 PF01011 PQQ enzyme repeat WM2015_RS07885 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WM2015_RS07885 PF01926 50S ribosome-binding GTPase WM2015_RS07890 PF00255 Glutathione peroxidase WM2015_RS07895 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WM2015_RS07895 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WM2015_RS07905 PF03480 Bacterial extracellular solute-binding protein, family 7 WM2015_RS07915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component WM2015_RS07920 PF02803 Thiolase, C-terminal domain WM2015_RS07920 PF00108 Thiolase, N-terminal domain WM2015_RS07925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WM2015_RS07925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WM2015_RS07925 PF00378 Enoyl-CoA hydratase/isomerase WM2015_RS07930 PF02545 Maf-like protein WM2015_RS07935 PF02620 Large ribosomal RNA subunit accumulation protein YceD WM2015_RS07940 PF01783 Ribosomal L32p protein family WM2015_RS07945 PF02504 Fatty acid synthesis protein WM2015_RS07950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WM2015_RS07950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WM2015_RS07955 PF00698 Acyl transferase domain WM2015_RS07965 PF00550 Phosphopantetheine attachment site WM2015_RS07970 PF00109 Beta-ketoacyl synthase, N-terminal domain WM2015_RS07970 PF02801 Beta-ketoacyl synthase, C-terminal domain WM2015_RS07975 PF00425 chorismate binding enzyme WM2015_RS07975 PF04715 Anthranilate synthase component I, N terminal region WM2015_RS07980 PF01063 Amino-transferase class IV WM2015_RS07985 PF02618 YceG-like family WM2015_RS07990 PF02223 Thymidylate kinase WM2015_RS07995 PF09115 DNA polymerase III, delta subunit, C terminal WM2015_RS08005 PF11799 impB/mucB/samB family C-terminal domain WM2015_RS08005 PF00817 impB/mucB/samB family WM2015_RS08010 PF13193 AMP-binding enzyme C-terminal domain WM2015_RS08010 PF00501 AMP-binding enzyme WM2015_RS08015 PF00571 CBS domain WM2015_RS08015 PF00478 IMP dehydrogenase / GMP reductase domain WM2015_RS08025 PF00270 DEAD/DEAH box helicase WM2015_RS08025 PF08494 DEAD/H associated WM2015_RS08025 PF00271 Helicase conserved C-terminal domain WM2015_RS08030 PF00510 Cytochrome c oxidase subunit III WM2015_RS08035 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WM2015_RS08040 PF00115 Cytochrome C and Quinol oxidase polypeptide I WM2015_RS08045 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WM2015_RS08045 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WM2015_RS08055 PF14850 DNA-binding domain of Proline dehydrogenase WM2015_RS08055 PF00171 Aldehyde dehydrogenase family WM2015_RS08055 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WM2015_RS08055 PF01619 Proline dehydrogenase WM2015_RS08060 PF13401 AAA domain WM2015_RS08060 PF01471 Putative peptidoglycan binding domain WM2015_RS08080 PF03806 AbgT putative transporter family WM2015_RS08085 PF04748 Divergent polysaccharide deacetylase WM2015_RS08090 PF13180 PDZ domain WM2015_RS08090 PF03572 Peptidase family S41 WM2015_RS08095 PF01551 Peptidase family M23 WM2015_RS08100 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WM2015_RS08100 PF01676 Metalloenzyme superfamily WM2015_RS08105 PF00581 Rhodanese-like domain WM2015_RS08110 PF02556 Preprotein translocase subunit SecB WM2015_RS08115 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WM2015_RS08115 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WM2015_RS08120 PF00588 SpoU rRNA Methylase family WM2015_RS08125 PF03477 ATP cone domain WM2015_RS08125 PF02867 Ribonucleotide reductase, barrel domain WM2015_RS08125 PF00317 Ribonucleotide reductase, all-alpha domain WM2015_RS08185 PF01594 AI-2E family transporter WM2015_RS08195 PF03553 Na+/H+ antiporter family WM2015_RS08200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WM2015_RS08200 PF07733 Bacterial DNA polymerase III alpha NTPase domain WM2015_RS08200 PF01336 OB-fold nucleic acid binding domain WM2015_RS08200 PF02811 PHP domain WM2015_RS08200 PF14579 Helix-hairpin-helix motif WM2015_RS08205 PF01479 S4 domain WM2015_RS08215 PF00183 Hsp90 protein WM2015_RS08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS08225 PF08460 Bacterial SH3 domain WM2015_RS08225 PF01551 Peptidase family M23 WM2015_RS08240 PF01245 Ribosomal protein L19 WM2015_RS08245 PF01746 tRNA (Guanine-1)-methyltransferase WM2015_RS08250 PF01782 RimM N-terminal domain WM2015_RS08250 PF05239 PRC-barrel domain WM2015_RS08255 PF00886 Ribosomal protein S16 WM2015_RS08275 PF01467 Cytidylyltransferase-like WM2015_RS08285 PF02881 SRP54-type protein, helical bundle domain WM2015_RS08285 PF00448 SRP54-type protein, GTPase domain WM2015_RS08290 PF14815 NUDIX domain WM2015_RS08290 PF00730 HhH-GPD superfamily base excision DNA repair protein WM2015_RS08290 PF10576 Iron-sulfur binding domain of endonuclease III WM2015_RS08290 PF00633 Helix-hairpin-helix motif WM2015_RS08295 PF00072 Response regulator receiver domain WM2015_RS08295 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS08300 PF07730 Histidine kinase WM2015_RS08310 PF04362 Bacterial Fe(2+) trafficking WM2015_RS08325 PF17827 PrmC N-terminal domain WM2015_RS08325 PF05175 Methyltransferase small domain WM2015_RS08330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_RS08330 PF00403 Heavy-metal-associated domain WM2015_RS08330 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS08335 PF01121 Dephospho-CoA kinase WM2015_RS08340 PF00582 Universal stress protein family WM2015_RS08345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WM2015_RS08345 PF12826 Helix-hairpin-helix motif WM2015_RS08345 PF03120 NAD-dependent DNA ligase OB-fold domain WM2015_RS08345 PF00533 BRCA1 C Terminus (BRCT) domain WM2015_RS08345 PF01653 NAD-dependent DNA ligase adenylation domain WM2015_RS08350 PF04354 ZipA, C-terminal FtsZ-binding domain WM2015_RS08355 PF02463 RecF/RecN/SMC N terminal domain WM2015_RS08360 PF14489 QueF-like protein WM2015_RS08370 PF01722 BolA-like protein WM2015_RS08375 PF03795 YCII-related domain WM2015_RS08380 PF02616 Segregation and condensation protein ScpA WM2015_RS08385 PF04079 Segregation and condensation complex subunit ScpB WM2015_RS08390 PF00849 RNA pseudouridylate synthase WM2015_RS08390 PF01479 S4 domain WM2015_RS08400 PF08032 RNA 2'-O ribose methyltransferase substrate binding WM2015_RS08400 PF00588 SpoU rRNA Methylase family WM2015_RS08405 PF08461 Ribonuclease R winged-helix domain WM2015_RS08405 PF00575 S1 RNA binding domain WM2015_RS08405 PF00773 RNB domain WM2015_RS08405 PF08206 Ribonuclease B OB domain WM2015_RS08405 PF17876 Cold shock domain WM2015_RS08410 PF01476 LysM domain WM2015_RS08410 PF01464 Transglycosylase SLT domain WM2015_RS08425 PF02649 Type I GTP cyclohydrolase folE2 WM2015_RS08435 PF13411 MerR HTH family regulatory protein WM2015_RS08440 PF00216 Bacterial DNA-binding protein WM2015_RS08445 PF03147 Ferredoxin-fold anticodon binding domain WM2015_RS08445 PF03483 B3/4 domain WM2015_RS08445 PF01588 Putative tRNA binding domain WM2015_RS08445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WM2015_RS08445 PF03484 tRNA synthetase B5 domain WM2015_RS08450 PF01409 tRNA synthetases class II core domain (F) WM2015_RS08450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WM2015_RS08455 PF00453 Ribosomal protein L20 WM2015_RS08460 PF01632 Ribosomal protein L35 WM2015_RS08465 PF05198 Translation initiation factor IF-3, N-terminal domain WM2015_RS08465 PF00707 Translation initiation factor IF-3, C-terminal domain WM2015_RS08470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WM2015_RS08470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WM2015_RS08470 PF03129 Anticodon binding domain WM2015_RS08470 PF02824 TGS domain WM2015_RS08505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM2015_RS08510 PF00873 AcrB/AcrD/AcrF family WM2015_RS08540 PF05724 Thiopurine S-methyltransferase (TPMT) WM2015_RS08545 PF00873 AcrB/AcrD/AcrF family WM2015_RS08555 PF01595 Cyclin M transmembrane N-terminal domain WM2015_RS08555 PF00571 CBS domain WM2015_RS08560 PF03764 Elongation factor G, domain IV WM2015_RS08560 PF00679 Elongation factor G C-terminus WM2015_RS08560 PF03144 Elongation factor Tu domain 2 WM2015_RS08560 PF14492 Elongation Factor G, domain II WM2015_RS08560 PF00009 Elongation factor Tu GTP binding domain WM2015_RS08570 PF03061 Thioesterase superfamily WM2015_RS08575 PF00326 Prolyl oligopeptidase family WM2015_RS08575 PF07676 WD40-like Beta Propeller Repeat WM2015_RS08580 PF01565 FAD binding domain WM2015_RS08580 PF02913 FAD linked oxidases, C-terminal domain WM2015_RS08585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WM2015_RS08585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM2015_RS08585 PF01842 ACT domain WM2015_RS08595 PF00202 Aminotransferase class-III WM2015_RS08600 PF07728 AAA domain (dynein-related subfamily) WM2015_RS08605 PF00437 Type II/IV secretion system protein WM2015_RS08610 PF01230 HIT domain WM2015_RS08635 PF01430 Hsp33 protein WM2015_RS08640 PF13419 Haloacid dehalogenase-like hydrolase WM2015_RS08650 PF01979 Amidohydrolase family WM2015_RS08655 PF01132 Elongation factor P (EF-P) OB domain WM2015_RS08655 PF08207 Elongation factor P (EF-P) KOW-like domain WM2015_RS08655 PF09285 Elongation factor P, C-terminal WM2015_RS08660 PF04055 Radical SAM superfamily WM2015_RS08670 PF01435 Peptidase family M48 WM2015_RS08675 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM2015_RS08680 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WM2015_RS08685 PF01171 PP-loop family WM2015_RS08685 PF11734 TilS substrate C-terminal domain WM2015_RS08685 PF09179 TilS substrate binding domain WM2015_RS08690 PF02609 Exonuclease VII small subunit WM2015_RS08715 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_RS08715 PF12804 MobA-like NTP transferase domain WM2015_RS08725 PF00550 Phosphopantetheine attachment site WM2015_RS08725 PF02801 Beta-ketoacyl synthase, C-terminal domain WM2015_RS08725 PF00109 Beta-ketoacyl synthase, N-terminal domain WM2015_RS08725 PF00202 Aminotransferase class-III WM2015_RS08725 PF16197 Ketoacyl-synthetase C-terminal extension WM2015_RS08725 PF00501 AMP-binding enzyme WM2015_RS08725 PF13193 AMP-binding enzyme C-terminal domain WM2015_RS08725 PF00668 Condensation domain WM2015_RS08730 PF01370 NAD dependent epimerase/dehydratase family WM2015_RS08730 PF00391 PEP-utilising enzyme, mobile domain WM2015_RS08735 PF00550 Phosphopantetheine attachment site WM2015_RS08740 PF00155 Aminotransferase class I and II WM2015_RS08745 PF00719 Inorganic pyrophosphatase WM2015_RS08765 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain WM2015_RS08770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WM2015_RS08770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WM2015_RS08775 PF01979 Amidohydrolase family WM2015_RS08775 PF13382 Adenine deaminase C-terminal domain WM2015_RS08780 PF03109 ABC1 family WM2015_RS08785 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_RS08800 PF07995 Glucose / Sorbosone dehydrogenase WM2015_RS08815 PF00795 Carbon-nitrogen hydrolase WM2015_RS08815 PF00583 Acetyltransferase (GNAT) family WM2015_RS08820 PF13439 Glycosyltransferase Family 4 WM2015_RS08820 PF00534 Glycosyl transferases group 1 WM2015_RS08825 PF02601 Exonuclease VII, large subunit WM2015_RS08825 PF13742 OB-fold nucleic acid binding domain WM2015_RS08830 PF01205 Uncharacterized protein family UPF0029 WM2015_RS08840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM2015_RS08840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM2015_RS08840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM2015_RS08840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM2015_RS08845 PF00809 Pterin binding enzyme WM2015_RS08850 PF17862 AAA+ lid domain WM2015_RS08850 PF06480 FtsH Extracellular WM2015_RS08850 PF01434 Peptidase family M41 WM2015_RS08850 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS08855 PF01728 FtsJ-like methyltransferase WM2015_RS08860 PF01985 CRS1 / YhbY (CRM) domain WM2015_RS08870 PF18158 Adaptive response protein AidB N-terminal domain WM2015_RS08870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS08870 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS08875 PF03061 Thioesterase superfamily WM2015_RS08880 PF02627 Carboxymuconolactone decarboxylase family WM2015_RS08885 PF00578 AhpC/TSA family WM2015_RS08890 PF03466 LysR substrate binding domain WM2015_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_RS08910 PF00005 ABC transporter WM2015_RS08945 PF02348 Cytidylyltransferase WM2015_RS08950 PF00682 HMGL-like WM2015_RS08950 PF07836 DmpG-like communication domain WM2015_RS08955 PF00285 Citrate synthase, C-terminal domain WM2015_RS08965 PF05430 S-adenosyl-L-methionine-dependent methyltransferase WM2015_RS08965 PF01266 FAD dependent oxidoreductase WM2015_RS08970 PF00351 Biopterin-dependent aromatic amino acid hydroxylase WM2015_RS08975 PF01329 Pterin 4 alpha carbinolamine dehydratase WM2015_RS08980 PF07726 ATPase family associated with various cellular activities (AAA) WM2015_RS08980 PF17863 AAA lid domain WM2015_RS08990 PF01841 Transglutaminase-like superfamily WM2015_RS08990 PF11992 Domain of unknown function (DUF3488) WM2015_RS08990 PF13559 Domain of unknown function (DUF4129) WM2015_RS08995 PF00717 Peptidase S24-like WM2015_RS08995 PF01726 LexA DNA binding domain WM2015_RS09000 PF00795 Carbon-nitrogen hydrolase WM2015_RS09005 PF04305 Protein of unknown function (DUF455) WM2015_RS09010 PF00180 Isocitrate/isopropylmalate dehydrogenase WM2015_RS09040 PF01625 Peptide methionine sulfoxide reductase WM2015_RS09060 PF00072 Response regulator receiver domain WM2015_RS09065 PF00696 Amino acid kinase family WM2015_RS09065 PF03447 Homoserine dehydrogenase, NAD binding domain WM2015_RS09065 PF00742 Homoserine dehydrogenase WM2015_RS09070 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_RS09075 PF00561 alpha/beta hydrolase fold WM2015_RS09085 PF03466 LysR substrate binding domain WM2015_RS09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_RS09090 PF13419 Haloacid dehalogenase-like hydrolase WM2015_RS09100 PF00578 AhpC/TSA family WM2015_RS09110 PF00106 short chain dehydrogenase WM2015_RS09135 PF06974 Protein of unknown function (DUF1298) WM2015_RS09135 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain WM2015_RS09150 PF03301 Tryptophan 2,3-dioxygenase WM2015_RS09155 PF00676 Dehydrogenase E1 component WM2015_RS09160 PF02780 Transketolase, C-terminal domain WM2015_RS09160 PF02779 Transketolase, pyrimidine binding domain WM2015_RS09165 PF02817 e3 binding domain WM2015_RS09165 PF00364 Biotin-requiring enzyme WM2015_RS09165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM2015_RS09170 PF08443 RimK-like ATP-grasp domain WM2015_RS09170 PF18030 RimK PreATP-grasp domain WM2015_RS09175 PF18030 RimK PreATP-grasp domain WM2015_RS09175 PF08443 RimK-like ATP-grasp domain WM2015_RS09190 PF03937 Flavinator of succinate dehydrogenase WM2015_RS09195 PF13085 2Fe-2S iron-sulfur cluster binding domain WM2015_RS09195 PF13237 4Fe-4S dicluster domain WM2015_RS09200 PF02910 Fumarate reductase flavoprotein C-term WM2015_RS09200 PF00890 FAD binding domain WM2015_RS09205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WM2015_RS09210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WM2015_RS09230 PF01066 CDP-alcohol phosphatidyltransferase WM2015_RS09235 PF08459 UvrC Helix-hairpin-helix N-terminal WM2015_RS09235 PF01541 GIY-YIG catalytic domain WM2015_RS09235 PF02151 UvrB/uvrC motif WM2015_RS09240 PF01451 Low molecular weight phosphotyrosine protein phosphatase WM2015_RS09245 PF02348 Cytidylyltransferase WM2015_RS09250 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WM2015_RS09255 PF00005 ABC transporter WM2015_RS09255 PF00664 ABC transporter transmembrane region WM2015_RS09260 PF02472 Biopolymer transport protein ExbD/TolR WM2015_RS09265 PF01618 MotA/TolQ/ExbB proton channel family WM2015_RS09270 PF00753 Metallo-beta-lactamase superfamily WM2015_RS09270 PF03772 Competence protein WM2015_RS09275 PF00005 ABC transporter WM2015_RS09280 PF02687 FtsX-like permease family WM2015_RS09280 PF12704 MacB-like periplasmic core domain WM2015_RS09285 PF01479 S4 domain WM2015_RS09285 PF00849 RNA pseudouridylate synthase WM2015_RS09290 PF10150 Ribonuclease E/G family WM2015_RS09290 PF12111 Polyribonucleotide phosphorylase C terminal WM2015_RS09290 PF00575 S1 RNA binding domain WM2015_RS09295 PF01113 Dihydrodipicolinate reductase, N-terminus WM2015_RS09295 PF05173 Dihydrodipicolinate reductase, C-terminus WM2015_RS09300 PF01556 DnaJ C terminal domain WM2015_RS09300 PF00226 DnaJ domain WM2015_RS09300 PF00684 DnaJ central domain WM2015_RS09305 PF00012 Hsp70 protein WM2015_RS09310 PF01025 GrpE WM2015_RS09315 PF02463 RecF/RecN/SMC N terminal domain WM2015_RS09320 PF01475 Ferric uptake regulator family WM2015_RS09325 PF04355 SmpA / OmlA family WM2015_RS09330 PF03658 RnfH family Ubiquitin WM2015_RS09335 PF03364 Polyketide cyclase / dehydrase and lipid transport WM2015_RS09340 PF01668 SmpB protein WM2015_RS09345 PF00589 Phage integrase family WM2015_RS09345 PF13356 Arm DNA-binding domain WM2015_RS09350 PF13276 HTH-like domain WM2015_RS09350 PF13683 Integrase core domain WM2015_RS09355 PF01527 Transposase WM2015_RS09365 PF00690 Cation transporter/ATPase, N-terminus WM2015_RS09365 PF00689 Cation transporting ATPase, C-terminus WM2015_RS09370 PF01209 ubiE/COQ5 methyltransferase family WM2015_RS09385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE WM2015_RS09390 PF03853 YjeF-related protein N-terminus WM2015_RS09390 PF01256 Carbohydrate kinase WM2015_RS09395 PF08331 Domain of unknown function (DUF1730) WM2015_RS09400 PF00202 Aminotransferase class-III WM2015_RS09405 PF01895 PhoU domain WM2015_RS09410 PF00005 ABC transporter WM2015_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS09420 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS09425 PF12849 PBP superfamily domain WM2015_RS09450 PF02472 Biopolymer transport protein ExbD/TolR WM2015_RS09455 PF01618 MotA/TolQ/ExbB proton channel family WM2015_RS09460 PF01618 MotA/TolQ/ExbB proton channel family WM2015_RS09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS09470 PF00989 PAS fold WM2015_RS09470 PF11808 Phosphate regulon sensor protein PhoR WM2015_RS09470 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS09475 PF00072 Response regulator receiver domain WM2015_RS09475 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS09485 PF01475 Ferric uptake regulator family WM2015_RS09490 PF00749 tRNA synthetases class I (E and Q), catalytic domain WM2015_RS09495 PF01464 Transglycosylase SLT domain WM2015_RS09495 PF00497 Bacterial extracellular solute-binding proteins, family 3 WM2015_RS09500 PF00929 Exonuclease WM2015_RS09505 PF00075 RNase H WM2015_RS09510 PF08241 Methyltransferase domain WM2015_RS09515 PF00753 Metallo-beta-lactamase superfamily WM2015_RS09515 PF16123 Hydroxyacylglutathione hydrolase C-terminus WM2015_RS09535 PF00535 Glycosyl transferase family 2 WM2015_RS09545 PF08241 Methyltransferase domain WM2015_RS09555 PF00114 Pilin (bacterial filament) WM2015_RS09555 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS09560 PF00114 Pilin (bacterial filament) WM2015_RS09560 PF07963 Prokaryotic N-terminal methylation motif WM2015_RS09565 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WM2015_RS09565 PF00437 Type II/IV secretion system protein WM2015_RS09570 PF00482 Type II secretion system (T2SS), protein F WM2015_RS09575 PF06750 Bacterial Peptidase A24 N-terminal domain WM2015_RS09575 PF01478 Type IV leader peptidase family WM2015_RS09580 PF00072 Response regulator receiver domain WM2015_RS09580 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS09590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WM2015_RS09590 PF07498 Rho termination factor, N-terminal domain WM2015_RS09590 PF07497 Rho termination factor, RNA-binding domain WM2015_RS09595 PF00085 Thioredoxin WM2015_RS09600 PF00270 DEAD/DEAH box helicase WM2015_RS09600 PF00271 Helicase conserved C-terminal domain WM2015_RS09600 PF12300 ATP-dependent RNA helicase RhlB WM2015_RS09605 PF00595 PDZ domain WM2015_RS09605 PF13180 PDZ domain WM2015_RS09610 PF03958 Bacterial type II/III secretion system short domain WM2015_RS09610 PF00263 Bacterial type II and III secretion system protein WM2015_RS09615 PF00437 Type II/IV secretion system protein WM2015_RS09620 PF00482 Type II secretion system (T2SS), protein F WM2015_RS09625 PF00005 ABC transporter WM2015_RS09630 PF18075 FtsX extracellular domain WM2015_RS09635 PF00293 NUDIX domain WM2015_RS09640 PF00368 Hydroxymethylglutaryl-coenzyme A reductase WM2015_RS09655 PF08521 Two-component sensor kinase N-terminal WM2015_RS09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS09655 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS09680 PF01593 Flavin containing amine oxidoreductase WM2015_RS09700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS09700 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS09700 PF09317 Domain of unknown function (DUF1974) WM2015_RS09700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_RS09705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain WM2015_RS09705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain WM2015_RS09705 PF00378 Enoyl-CoA hydratase/isomerase WM2015_RS09710 PF00108 Thiolase, N-terminal domain WM2015_RS09710 PF02803 Thiolase, C-terminal domain WM2015_RS09730 PF03793 PASTA domain WM2015_RS09730 PF00069 Protein kinase domain WM2015_RS09745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_RS09745 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS09745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS09765 PF03144 Elongation factor Tu domain 2 WM2015_RS09765 PF00009 Elongation factor Tu GTP binding domain WM2015_RS09765 PF00679 Elongation factor G C-terminus WM2015_RS09770 PF07719 Tetratricopeptide repeat WM2015_RS09770 PF07219 HemY protein N-terminus WM2015_RS09780 PF02602 Uroporphyrinogen-III synthase HemD WM2015_RS09785 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WM2015_RS09785 PF03900 Porphobilinogen deaminase, C-terminal domain WM2015_RS09790 PF00072 Response regulator receiver domain WM2015_RS09790 PF04397 LytTr DNA-binding domain WM2015_RS09805 PF01678 Diaminopimelate epimerase WM2015_RS09815 PF00589 Phage integrase family WM2015_RS09815 PF02899 Phage integrase, N-terminal SAM-like domain WM2015_RS09820 PF00227 Proteasome subunit WM2015_RS09825 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS09825 PF07724 AAA domain (Cdc48 subfamily) WM2015_RS09825 PF10431 C-terminal, D2-small domain, of ClpB protein WM2015_RS09830 PF00005 ABC transporter WM2015_RS09835 PF02405 Permease MlaE WM2015_RS09840 PF02470 MlaD protein WM2015_RS09860 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS09860 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS09860 PF00563 EAL domain WM2015_RS09860 PF13188 PAS domain WM2015_RS09865 PF01022 Bacterial regulatory protein, arsR family WM2015_RS09870 PF00809 Pterin binding enzyme WM2015_RS09870 PF02310 B12 binding domain WM2015_RS09870 PF02607 B12 binding domain WM2015_RS09870 PF02965 Vitamin B12 dependent methionine synthase, activation domain WM2015_RS09870 PF02574 Homocysteine S-methyltransferase WM2015_RS09875 PF02310 B12 binding domain WM2015_RS09875 PF02574 Homocysteine S-methyltransferase WM2015_RS09875 PF00809 Pterin binding enzyme WM2015_RS09875 PF02965 Vitamin B12 dependent methionine synthase, activation domain WM2015_RS09875 PF02607 B12 binding domain WM2015_RS09885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM2015_RS09885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_RS09895 PF07702 UTRA domain WM2015_RS09895 PF00392 Bacterial regulatory proteins, gntR family WM2015_RS09900 PF00005 ABC transporter WM2015_RS09920 PF01979 Amidohydrolase family WM2015_RS09925 PF01979 Amidohydrolase family WM2015_RS09930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WM2015_RS09935 PF13091 PLD-like domain WM2015_RS09940 PF00107 Zinc-binding dehydrogenase WM2015_RS09940 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS09945 PF00756 Putative esterase WM2015_RS09950 PF17757 UvrB interaction domain WM2015_RS09950 PF02151 UvrB/uvrC motif WM2015_RS09950 PF04851 Type III restriction enzyme, res subunit WM2015_RS09950 PF00271 Helicase conserved C-terminal domain WM2015_RS09950 PF12344 Ultra-violet resistance protein B WM2015_RS09955 PF00155 Aminotransferase class I and II WM2015_RS09965 PF00795 Carbon-nitrogen hydrolase WM2015_RS09965 PF02540 NAD synthase WM2015_RS09970 PF02629 CoA binding domain WM2015_RS09970 PF00549 CoA-ligase WM2015_RS09975 PF00549 CoA-ligase WM2015_RS09975 PF08442 ATP-grasp domain WM2015_RS09980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS09980 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS09985 PF00158 Sigma-54 interaction domain WM2015_RS09985 PF00072 Response regulator receiver domain WM2015_RS09985 PF02954 Bacterial regulatory protein, Fis family WM2015_RS10000 PF10017 Histidine-specific methyltransferase, SAM-dependent WM2015_RS10010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WM2015_RS10010 PF00056 lactate/malate dehydrogenase, NAD binding domain WM2015_RS10015 PF01474 Class-II DAHP synthetase family WM2015_RS10020 PF02600 Disulfide bond formation protein DsbB WM2015_RS10030 PF00171 Aldehyde dehydrogenase family WM2015_RS10040 PF00144 Beta-lactamase WM2015_RS10045 PF00781 Diacylglycerol kinase catalytic domain WM2015_RS10050 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS10050 PF00593 TonB dependent receptor WM2015_RS10055 PF10636 Hemin uptake protein hemP WM2015_RS10075 PF01258 Prokaryotic dksA/traR C4-type zinc finger WM2015_RS10085 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS10085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family WM2015_RS10090 PF07995 Glucose / Sorbosone dehydrogenase WM2015_RS10095 PF01926 50S ribosome-binding GTPase WM2015_RS10095 PF01018 GTP1/OBG WM2015_RS10100 PF01016 Ribosomal L27 protein WM2015_RS10105 PF00829 Ribosomal prokaryotic L21 protein WM2015_RS10115 PF17760 UvrA interaction domain WM2015_RS10115 PF17755 UvrA DNA-binding domain WM2015_RS10135 PF00378 Enoyl-CoA hydratase/isomerase WM2015_RS10145 PF00999 Sodium/hydrogen exchanger family WM2015_RS10145 PF03471 Transporter associated domain WM2015_RS10145 PF02080 TrkA-C domain WM2015_RS10160 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WM2015_RS10160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WM2015_RS10165 PF04012 PspA/IM30 family WM2015_RS10185 PF00378 Enoyl-CoA hydratase/isomerase WM2015_RS10205 PF01050 Mannose-6-phosphate isomerase WM2015_RS10205 PF00483 Nucleotidyl transferase WM2015_RS10210 PF04321 RmlD substrate binding domain WM2015_RS10215 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase WM2015_RS10220 PF00483 Nucleotidyl transferase WM2015_RS10225 PF16363 GDP-mannose 4,6 dehydratase WM2015_RS10230 PF00436 Single-strand binding protein family WM2015_RS10235 PF00348 Polyprenyl synthetase WM2015_RS10240 PF08245 Mur ligase middle domain WM2015_RS10250 PF01594 AI-2E family transporter WM2015_RS10260 PF00180 Isocitrate/isopropylmalate dehydrogenase WM2015_RS10260 PF18324 Hypothetical protein TT1725 WM2015_RS10265 PF00462 Glutaredoxin WM2015_RS10270 PF04358 DsrC like protein WM2015_RS10280 PF01435 Peptidase family M48 WM2015_RS10285 PF02503 Polyphosphate kinase middle domain WM2015_RS10285 PF13090 Polyphosphate kinase C-terminal domain 2 WM2015_RS10285 PF17941 Polyphosphate kinase C-terminal domain 1 WM2015_RS10285 PF13089 Polyphosphate kinase N-terminal domain WM2015_RS10290 PF02541 Ppx/GppA phosphatase family WM2015_RS10295 PF00152 tRNA synthetases class II (D, K and N) WM2015_RS10310 PF03441 FAD binding domain of DNA photolyase WM2015_RS10310 PF00875 DNA photolyase WM2015_RS10320 PF00156 Phosphoribosyl transferase domain WM2015_RS10325 PF02674 Colicin V production protein WM2015_RS10335 PF02875 Mur ligase family, glutamate ligase domain WM2015_RS10335 PF08245 Mur ligase middle domain WM2015_RS10340 PF01039 Carboxyl transferase domain WM2015_RS10340 PF17848 Acetyl-coA carboxylase zinc finger domain WM2015_RS10345 PF00290 Tryptophan synthase alpha chain WM2015_RS10350 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_RS10355 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WM2015_RS10360 PF01416 tRNA pseudouridine synthase WM2015_RS10370 PF02774 Semialdehyde dehydrogenase, dimerisation domain WM2015_RS10370 PF01118 Semialdehyde dehydrogenase, NAD binding domain WM2015_RS10375 PF01264 Chorismate synthase WM2015_RS10385 PF13472 GDSL-like Lipase/Acylhydrolase family WM2015_RS10390 PF00005 ABC transporter WM2015_RS10415 PF00578 AhpC/TSA family WM2015_RS10440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) WM2015_RS10445 PF01432 Peptidase family M3 WM2015_RS10450 PF00448 SRP54-type protein, GTPase domain WM2015_RS10450 PF02881 SRP54-type protein, helical bundle domain WM2015_RS10450 PF02978 Signal peptide binding domain WM2015_RS10455 PF01578 Cytochrome C assembly protein WM2015_RS10460 PF01595 Cyclin M transmembrane N-terminal domain WM2015_RS10460 PF03471 Transporter associated domain WM2015_RS10460 PF00571 CBS domain WM2015_RS10470 PF17149 Periplasmic sensor domain found in signal transduction proteins WM2015_RS10470 PF00672 HAMP domain WM2015_RS10470 PF00072 Response regulator receiver domain WM2015_RS10470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS10470 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS10470 PF01627 Hpt domain WM2015_RS10475 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WM2015_RS10480 PF02565 Recombination protein O C terminal WM2015_RS10480 PF11967 Recombination protein O N terminal WM2015_RS10485 PF01926 50S ribosome-binding GTPase WM2015_RS10485 PF07650 KH domain WM2015_RS10490 PF14622 Ribonuclease-III-like WM2015_RS10490 PF00035 Double-stranded RNA binding motif WM2015_RS10500 PF10502 Signal peptidase, peptidase S26 WM2015_RS10505 PF00679 Elongation factor G C-terminus WM2015_RS10505 PF00009 Elongation factor Tu GTP binding domain WM2015_RS10505 PF06421 GTP-binding protein LepA C-terminus WM2015_RS10510 PF13180 PDZ domain WM2015_RS10530 PF04542 Sigma-70 region 2 WM2015_RS10530 PF08281 Sigma-70, region 4 WM2015_RS10535 PF00171 Aldehyde dehydrogenase family WM2015_RS10540 PF01180 Dihydroorotate dehydrogenase WM2015_RS10545 PF01565 FAD binding domain WM2015_RS10545 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WM2015_RS10555 PF00140 Sigma-70 factor, region 1.2 WM2015_RS10555 PF04545 Sigma-70, region 4 WM2015_RS10555 PF04542 Sigma-70 region 2 WM2015_RS10560 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain WM2015_RS10560 PF00326 Prolyl oligopeptidase family WM2015_RS10570 PF03601 Conserved hypothetical protein 698 WM2015_RS10575 PF03447 Homoserine dehydrogenase, NAD binding domain WM2015_RS10575 PF00742 Homoserine dehydrogenase WM2015_RS10575 PF13840 ACT domain WM2015_RS10575 PF01842 ACT domain WM2015_RS10575 PF00696 Amino acid kinase family WM2015_RS10580 PF00288 GHMP kinases N terminal domain WM2015_RS10580 PF08544 GHMP kinases C terminal WM2015_RS10585 PF04402 Protein of unknown function (DUF541) WM2015_RS10620 PF00484 Carbonic anhydrase WM2015_RS10625 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_RS10625 PF14821 Threonine synthase N terminus WM2015_RS10655 PF01175 Urocanase Rossmann-like domain WM2015_RS10655 PF17391 Urocanase N-terminal domain WM2015_RS10655 PF17392 Urocanase C-terminal domain WM2015_RS10665 PF00069 Protein kinase domain WM2015_RS10665 PF03793 PASTA domain WM2015_RS10680 PF00221 Aromatic amino acid lyase WM2015_RS10685 PF01979 Amidohydrolase family WM2015_RS10705 PF02355 Protein export membrane protein WM2015_RS10705 PF07549 SecD/SecF GG Motif WM2015_RS10710 PF07549 SecD/SecF GG Motif WM2015_RS10710 PF13721 SecD export protein N-terminal TM region WM2015_RS10710 PF02355 Protein export membrane protein WM2015_RS10715 PF02699 Preprotein translocase subunit WM2015_RS10745 PF00069 Protein kinase domain WM2015_RS10745 PF03793 PASTA domain WM2015_RS10755 PF01702 Queuine tRNA-ribosyltransferase WM2015_RS10760 PF02547 Queuosine biosynthesis protein WM2015_RS10775 PF00266 Aminotransferase class-V WM2015_RS10780 PF01494 FAD binding domain WM2015_RS10795 PF00535 Glycosyl transferase family 2 WM2015_RS10800 PF05922 Peptidase inhibitor I9 WM2015_RS10800 PF00082 Subtilase family WM2015_RS10800 PF02225 PA domain WM2015_RS10800 PF13860 FlgD Ig-like domain WM2015_RS10805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_RS10805 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS10810 PF00005 ABC transporter WM2015_RS10815 PF03379 CcmB protein WM2015_RS10820 PF01578 Cytochrome C assembly protein WM2015_RS10825 PF03100 CcmE WM2015_RS10830 PF01578 Cytochrome C assembly protein WM2015_RS10830 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal WM2015_RS10835 PF08534 Redoxin WM2015_RS10840 PF03918 Cytochrome C biogenesis protein WM2015_RS10850 PF01865 Protein of unknown function DUF47 WM2015_RS10855 PF01384 Phosphate transporter family WM2015_RS10875 PF03023 Lipid II flippase MurJ WM2015_RS10880 PF01649 Ribosomal protein S20 WM2015_RS10890 PF01464 Transglycosylase SLT domain WM2015_RS10905 PF00929 Exonuclease WM2015_RS10905 PF08411 Exonuclease C-terminal WM2015_RS10915 PF10531 SLBB domain WM2015_RS10920 PF02132 RecR protein WM2015_RS10920 PF13662 Toprim domain WM2015_RS10925 PF02575 YbaB/EbfC DNA-binding family WM2015_RS10930 PF12170 DNA polymerase III tau subunit V interacting with alpha WM2015_RS10930 PF12169 DNA polymerase III subunits gamma and tau domain III WM2015_RS10935 PF05922 Peptidase inhibitor I9 WM2015_RS10935 PF04151 Bacterial pre-peptidase C-terminal domain WM2015_RS10935 PF00082 Subtilase family WM2015_RS10940 PF01546 Peptidase family M20/M25/M40 WM2015_RS10940 PF07687 Peptidase dimerisation domain WM2015_RS10945 PF04011 LemA family WM2015_RS10955 PF00155 Aminotransferase class I and II WM2015_RS10965 PF03695 Uncharacterised protein family (UPF0149) WM2015_RS10965 PF02810 SEC-C motif WM2015_RS10975 PF00311 Phosphoenolpyruvate carboxylase WM2015_RS11010 PF07969 Amidohydrolase family WM2015_RS11025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM2015_RS11030 PF00873 AcrB/AcrD/AcrF family WM2015_RS11080 PF05368 NmrA-like family WM2015_RS11090 PF11954 Domain of unknown function (DUF3471) WM2015_RS11090 PF00144 Beta-lactamase WM2015_RS11120 PF02567 Phenazine biosynthesis-like protein WM2015_RS11125 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 WM2015_RS11130 PF01546 Peptidase family M20/M25/M40 WM2015_RS11130 PF07687 Peptidase dimerisation domain WM2015_RS11135 PF00474 Sodium:solute symporter family WM2015_RS11160 PF02803 Thiolase, C-terminal domain WM2015_RS11160 PF00108 Thiolase, N-terminal domain WM2015_RS11165 PF00682 HMGL-like WM2015_RS11175 PF00106 short chain dehydrogenase WM2015_RS11185 PF05552 Conserved TM helix WM2015_RS11185 PF00924 Mechanosensitive ion channel WM2015_RS11200 PF00501 AMP-binding enzyme WM2015_RS11200 PF13193 AMP-binding enzyme C-terminal domain WM2015_RS11205 PF00873 AcrB/AcrD/AcrF family WM2015_RS11230 PF03793 PASTA domain WM2015_RS11230 PF00069 Protein kinase domain WM2015_RS11240 PF00766 Electron transfer flavoprotein FAD-binding domain WM2015_RS11240 PF01012 Electron transfer flavoprotein domain WM2015_RS11245 PF01012 Electron transfer flavoprotein domain WM2015_RS11250 PF05175 Methyltransferase small domain WM2015_RS11260 PF02666 Phosphatidylserine decarboxylase WM2015_RS11275 PF04298 Putative neutral zinc metallopeptidase WM2015_RS11280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WM2015_RS11290 PF02021 Uncharacterised protein family UPF0102 WM2015_RS11300 PF04608 Phosphatidylglycerophosphatase A WM2015_RS11305 PF00586 AIR synthase related protein, N-terminal domain WM2015_RS11305 PF02769 AIR synthase related protein, C-terminal domain WM2015_RS11310 PF01029 NusB family WM2015_RS11315 PF00885 6,7-dimethyl-8-ribityllumazine synthase WM2015_RS11320 PF00925 GTP cyclohydrolase II WM2015_RS11320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WM2015_RS11325 PF00677 Lumazine binding domain WM2015_RS11330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WM2015_RS11330 PF01872 RibD C-terminal domain WM2015_RS11335 PF03477 ATP cone domain WM2015_RS11340 PF00464 Serine hydroxymethyltransferase WM2015_RS11355 PF00005 ABC transporter WM2015_RS11370 PF00072 Response regulator receiver domain WM2015_RS11370 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS11375 PF00487 Fatty acid desaturase WM2015_RS11395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WM2015_RS11395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WM2015_RS11395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WM2015_RS11395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WM2015_RS11405 PF01370 NAD dependent epimerase/dehydratase family WM2015_RS11410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WM2015_RS11410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WM2015_RS11410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WM2015_RS11430 PF03006 Haemolysin-III related WM2015_RS11440 PF00664 ABC transporter transmembrane region WM2015_RS11440 PF00005 ABC transporter WM2015_RS11445 PF00892 EamA-like transporter family WM2015_RS11455 PF01196 Ribosomal protein L17 WM2015_RS11460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WM2015_RS11460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WM2015_RS11460 PF01000 RNA polymerase Rpb3/RpoA insert domain WM2015_RS11465 PF00163 Ribosomal protein S4/S9 N-terminal domain WM2015_RS11465 PF01479 S4 domain WM2015_RS11470 PF00411 Ribosomal protein S11 WM2015_RS11475 PF00416 Ribosomal protein S13/S18 WM2015_RS11480 PF00444 Ribosomal protein L36 WM2015_RS11485 PF00344 SecY translocase WM2015_RS11490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WM2015_RS11495 PF00327 Ribosomal protein L30p/L7e WM2015_RS11500 PF03719 Ribosomal protein S5, C-terminal domain WM2015_RS11500 PF00333 Ribosomal protein S5, N-terminal domain WM2015_RS11505 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WM2015_RS11510 PF00347 Ribosomal protein L6 WM2015_RS11515 PF00410 Ribosomal protein S8 WM2015_RS11520 PF00253 Ribosomal protein S14p/S29e WM2015_RS11525 PF00281 Ribosomal protein L5 WM2015_RS11525 PF00673 ribosomal L5P family C-terminus WM2015_RS11530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WM2015_RS11530 PF00467 KOW motif WM2015_RS11535 PF00238 Ribosomal protein L14p/L23e WM2015_RS11540 PF00366 Ribosomal protein S17 WM2015_RS11545 PF00831 Ribosomal L29 protein WM2015_RS11550 PF00252 Ribosomal protein L16p/L10e WM2015_RS11555 PF07650 KH domain WM2015_RS11555 PF00189 Ribosomal protein S3, C-terminal domain WM2015_RS11560 PF00237 Ribosomal protein L22p/L17e WM2015_RS11565 PF00203 Ribosomal protein S19 WM2015_RS11570 PF03947 Ribosomal Proteins L2, C-terminal domain WM2015_RS11570 PF00181 Ribosomal Proteins L2, RNA binding domain WM2015_RS11575 PF00276 Ribosomal protein L23 WM2015_RS11580 PF00573 Ribosomal protein L4/L1 family WM2015_RS11585 PF00297 Ribosomal protein L3 WM2015_RS11590 PF00338 Ribosomal protein S10p/S20e WM2015_RS11595 PF03143 Elongation factor Tu C-terminal domain WM2015_RS11595 PF03144 Elongation factor Tu domain 2 WM2015_RS11595 PF00009 Elongation factor Tu GTP binding domain WM2015_RS11600 PF00679 Elongation factor G C-terminus WM2015_RS11600 PF00009 Elongation factor Tu GTP binding domain WM2015_RS11600 PF14492 Elongation Factor G, domain II WM2015_RS11600 PF03144 Elongation factor Tu domain 2 WM2015_RS11600 PF03764 Elongation factor G, domain IV WM2015_RS11605 PF00177 Ribosomal protein S7p/S5e WM2015_RS11610 PF00164 Ribosomal protein S12/S23 WM2015_RS11625 PF04389 Peptidase family M28 WM2015_RS11625 PF02225 PA domain WM2015_RS11650 PF05000 RNA polymerase Rpb1, domain 4 WM2015_RS11650 PF00623 RNA polymerase Rpb1, domain 2 WM2015_RS11650 PF04983 RNA polymerase Rpb1, domain 3 WM2015_RS11650 PF04997 RNA polymerase Rpb1, domain 1 WM2015_RS11650 PF04998 RNA polymerase Rpb1, domain 5 WM2015_RS11655 PF04563 RNA polymerase beta subunit WM2015_RS11655 PF04561 RNA polymerase Rpb2, domain 2 WM2015_RS11655 PF04565 RNA polymerase Rpb2, domain 3 WM2015_RS11655 PF10385 RNA polymerase beta subunit external 1 domain WM2015_RS11655 PF00562 RNA polymerase Rpb2, domain 6 WM2015_RS11655 PF04560 RNA polymerase Rpb2, domain 7 WM2015_RS11660 PF16320 Ribosomal protein L7/L12 dimerisation domain WM2015_RS11660 PF00542 Ribosomal protein L7/L12 C-terminal domain WM2015_RS11665 PF00466 Ribosomal protein L10 WM2015_RS11670 PF00687 Ribosomal protein L1p/L10e family WM2015_RS11675 PF03946 Ribosomal protein L11, N-terminal domain WM2015_RS11675 PF00298 Ribosomal protein L11, RNA binding domain WM2015_RS11680 PF00467 KOW motif WM2015_RS11680 PF02357 Transcription termination factor nusG WM2015_RS11685 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WM2015_RS11695 PF03143 Elongation factor Tu C-terminal domain WM2015_RS11695 PF03144 Elongation factor Tu domain 2 WM2015_RS11695 PF00009 Elongation factor Tu GTP binding domain WM2015_RS11715 PF01926 50S ribosome-binding GTPase WM2015_RS11715 PF06071 Protein of unknown function (DUF933) WM2015_RS11720 PF01195 Peptidyl-tRNA hydrolase WM2015_RS11725 PF01386 Ribosomal L25p family WM2015_RS11725 PF14693 Ribosomal protein TL5, C-terminal domain WM2015_RS11730 PF01027 Inhibitor of apoptosis-promoting Bax1 WM2015_RS11740 PF01252 Signal peptidase (SPase) II WM2015_RS11745 PF06827 Zinc finger found in FPG and IleRS WM2015_RS11745 PF08264 Anticodon-binding domain of tRNA WM2015_RS11745 PF00133 tRNA synthetases class I (I, L, M and V) WM2015_RS11750 PF01687 Riboflavin kinase WM2015_RS11750 PF06574 FAD synthetase WM2015_RS11765 PF10605 3HB-oligomer hydrolase (3HBOH) WM2015_RS11775 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS11775 PF00072 Response regulator receiver domain WM2015_RS11790 PF03793 PASTA domain WM2015_RS11790 PF00069 Protein kinase domain WM2015_RS11795 PF18027 Cytosolic carboxypeptidase N-terminal domain WM2015_RS11795 PF00246 Zinc carboxypeptidase WM2015_RS11800 PF00849 RNA pseudouridylate synthase WM2015_RS11805 PF12802 MarR family WM2015_RS11810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_RS11815 PF04209 homogentisate 1,2-dioxygenase WM2015_RS11840 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS11840 PF08521 Two-component sensor kinase N-terminal WM2015_RS11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS11845 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS11845 PF00072 Response regulator receiver domain WM2015_RS11880 PF02798 Glutathione S-transferase, N-terminal domain WM2015_RS11880 PF14497 Glutathione S-transferase, C-terminal domain WM2015_RS11890 PF00691 OmpA family WM2015_RS11900 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_RS11900 PF00571 CBS domain WM2015_RS11905 PF03806 AbgT putative transporter family WM2015_RS11915 PF01209 ubiE/COQ5 methyltransferase family WM2015_RS11925 PF03109 ABC1 family WM2015_RS11930 PF01648 4'-phosphopantetheinyl transferase superfamily WM2015_RS11935 PF00293 NUDIX domain WM2015_RS11940 PF02810 SEC-C motif WM2015_RS11940 PF01043 SecA preprotein cross-linking domain WM2015_RS11940 PF07516 SecA Wing and Scaffold domain WM2015_RS11940 PF07517 SecA DEAD-like domain WM2015_RS11950 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WM2015_RS11955 PF12327 FtsZ family, C-terminal domain WM2015_RS11955 PF00091 Tubulin/FtsZ family, GTPase domain WM2015_RS11960 PF02491 SHS2 domain inserted in FTSA WM2015_RS11965 PF03799 Cell division protein FtsQ WM2015_RS11965 PF08478 POTRA domain, FtsQ-type WM2015_RS11970 PF01820 D-ala D-ala ligase N-terminus WM2015_RS11970 PF07478 D-ala D-ala ligase C-terminus WM2015_RS11975 PF02875 Mur ligase family, glutamate ligase domain WM2015_RS11975 PF01225 Mur ligase family, catalytic domain WM2015_RS11975 PF08245 Mur ligase middle domain WM2015_RS11980 PF04101 Glycosyltransferase family 28 C-terminal domain WM2015_RS11980 PF03033 Glycosyltransferase family 28 N-terminal domain WM2015_RS11985 PF01098 Cell cycle protein WM2015_RS11990 PF00953 Glycosyl transferase family 4 WM2015_RS11990 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WM2015_RS11995 PF01225 Mur ligase family, catalytic domain WM2015_RS11995 PF02875 Mur ligase family, glutamate ligase domain WM2015_RS11995 PF08245 Mur ligase middle domain WM2015_RS12000 PF01225 Mur ligase family, catalytic domain WM2015_RS12000 PF08245 Mur ligase middle domain WM2015_RS12000 PF02875 Mur ligase family, glutamate ligase domain WM2015_RS12005 PF00905 Penicillin binding protein transpeptidase domain WM2015_RS12005 PF03717 Penicillin-binding Protein dimerisation domain WM2015_RS12010 PF04999 Cell division protein FtsL WM2015_RS12015 PF01795 MraW methylase family WM2015_RS12020 PF02381 MraZ protein, putative antitoxin-like WM2015_RS12025 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases WM2015_RS12025 PF11892 Domain of unknown function (DUF3412) WM2015_RS12025 PF03641 Possible lysine decarboxylase WM2015_RS12030 PF00593 TonB dependent receptor WM2015_RS12040 PF12002 MgsA AAA+ ATPase C terminal WM2015_RS12040 PF16193 AAA C-terminal domain WM2015_RS12040 PF00004 ATPase family associated with various cellular activities (AAA) WM2015_RS12070 PF00005 ABC transporter WM2015_RS12080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WM2015_RS12085 PF13439 Glycosyltransferase Family 4 WM2015_RS12085 PF00534 Glycosyl transferases group 1 WM2015_RS12090 PF04794 YdjC-like protein WM2015_RS12095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WM2015_RS12095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WM2015_RS12095 PF02142 MGS-like domain WM2015_RS12115 PF13439 Glycosyltransferase Family 4 WM2015_RS12115 PF00534 Glycosyl transferases group 1 WM2015_RS12130 PF01943 Polysaccharide biosynthesis protein WM2015_RS12135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WM2015_RS12155 PF10531 SLBB domain WM2015_RS12155 PF02563 Polysaccharide biosynthesis/export protein WM2015_RS12160 PF13614 AAA domain WM2015_RS12175 PF01797 Transposase IS200 like WM2015_RS12180 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS12180 PF00072 Response regulator receiver domain WM2015_RS12180 PF00672 HAMP domain WM2015_RS12180 PF01627 Hpt domain WM2015_RS12185 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS12185 PF00593 TonB dependent receptor WM2015_RS12200 PF01053 Cys/Met metabolism PLP-dependent enzyme WM2015_RS12210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WM2015_RS12210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WM2015_RS12215 PF00561 alpha/beta hydrolase fold WM2015_RS12220 PF00501 AMP-binding enzyme WM2015_RS12225 PF00953 Glycosyl transferase family 4 WM2015_RS12235 PF01142 tRNA pseudouridine synthase D (TruD) WM2015_RS12245 PF00072 Response regulator receiver domain WM2015_RS12245 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS12255 PF04977 Septum formation initiator WM2015_RS12260 PF07687 Peptidase dimerisation domain WM2015_RS12260 PF01546 Peptidase family M20/M25/M40 WM2015_RS12265 PF00459 Inositol monophosphatase family WM2015_RS12270 PF00588 SpoU rRNA Methylase family WM2015_RS12275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WM2015_RS12280 PF02896 PEP-utilising enzyme, TIM barrel domain WM2015_RS12280 PF05524 PEP-utilising enzyme, N-terminal WM2015_RS12280 PF00391 PEP-utilising enzyme, mobile domain WM2015_RS12285 PF00381 PTS HPr component phosphorylation site WM2015_RS12295 PF03668 P-loop ATPase protein family WM2015_RS12300 PF02603 HPr Serine kinase N terminus WM2015_RS12300 PF07475 HPr Serine kinase C-terminal domain WM2015_RS12305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 WM2015_RS12310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WM2015_RS12315 PF04552 Sigma-54, DNA binding domain WM2015_RS12315 PF04963 Sigma-54 factor, core binding domain WM2015_RS12315 PF00309 Sigma-54 factor, Activator interacting domain (AID) WM2015_RS12330 PF02033 Ribosome-binding factor A WM2015_RS12335 PF04760 Translation initiation factor IF-2, N-terminal region WM2015_RS12335 PF00009 Elongation factor Tu GTP binding domain WM2015_RS12335 PF03144 Elongation factor Tu domain 2 WM2015_RS12335 PF11987 Translation-initiation factor 2 WM2015_RS12335 PF08364 Bacterial translation initiation factor IF-2 associated region WM2015_RS12340 PF08529 NusA N-terminal domain WM2015_RS12340 PF13184 NusA-like KH domain WM2015_RS12345 PF17384 RimP C-terminal SH3 domain WM2015_RS12345 PF02576 RimP N-terminal domain WM2015_RS12355 PF00326 Prolyl oligopeptidase family WM2015_RS12355 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region WM2015_RS12385 PF04389 Peptidase family M28 WM2015_RS12385 PF01483 Proprotein convertase P-domain WM2015_RS12390 PF00158 Sigma-54 interaction domain WM2015_RS12390 PF13188 PAS domain WM2015_RS12390 PF02954 Bacterial regulatory protein, Fis family WM2015_RS12395 PF03793 PASTA domain WM2015_RS12395 PF00069 Protein kinase domain WM2015_RS12405 PF00266 Aminotransferase class-V WM2015_RS12410 PF01458 Uncharacterized protein family (UPF0051) WM2015_RS12415 PF00005 ABC transporter WM2015_RS12425 PF01458 Uncharacterized protein family (UPF0051) WM2015_RS12430 PF02082 Transcriptional regulator WM2015_RS12440 PF01636 Phosphotransferase enzyme family WM2015_RS12445 PF00483 Nucleotidyl transferase WM2015_RS12450 PF00245 Alkaline phosphatase WM2015_RS12460 PF13537 Glutamine amidotransferase domain WM2015_RS12460 PF00733 Asparagine synthase WM2015_RS12465 PF00308 Bacterial dnaA protein WM2015_RS12470 PF01066 CDP-alcohol phosphatidyltransferase WM2015_RS12480 PF00586 AIR synthase related protein, N-terminal domain WM2015_RS12480 PF02769 AIR synthase related protein, C-terminal domain WM2015_RS12485 PF00551 Formyl transferase WM2015_RS12495 PF01435 Peptidase family M48 WM2015_RS12500 PF08281 Sigma-70, region 4 WM2015_RS12500 PF04542 Sigma-70 region 2 WM2015_RS12520 PF11940 Domain of unknown function (DUF3458) Ig-like fold WM2015_RS12520 PF01433 Peptidase family M1 domain WM2015_RS12520 PF17432 Domain of unknown function (DUF3458_C) ARM repeats WM2015_RS12525 PF00291 Pyridoxal-phosphate dependent enzyme WM2015_RS12535 PF13185 GAF domain WM2015_RS12545 PF01979 Amidohydrolase family WM2015_RS12560 PF03958 Bacterial type II/III secretion system short domain WM2015_RS12560 PF00263 Bacterial type II and III secretion system protein WM2015_RS12560 PF07660 Secretin and TonB N terminus short domain WM2015_RS12560 PF11741 AMIN domain WM2015_RS12565 PF04351 Pilus assembly protein, PilP WM2015_RS12570 PF04350 Pilus assembly protein, PilO WM2015_RS12575 PF05137 Fimbrial assembly protein (PilN) WM2015_RS12580 PF11104 Type IV pilus assembly protein PilM; WM2015_RS12585 PF00905 Penicillin binding protein transpeptidase domain WM2015_RS12585 PF00912 Transglycosylase WM2015_RS12585 PF17092 Penicillin-binding protein OB-like domain WM2015_RS12610 PF13932 GidA associated domain WM2015_RS12610 PF01134 Glucose inhibited division protein A WM2015_RS12615 PF01235 Sodium:alanine symporter family WM2015_RS12630 PF01343 Peptidase family S49 WM2015_RS12635 PF01554 MatE WM2015_RS12645 PF00069 Protein kinase domain WM2015_RS12645 PF03793 PASTA domain WM2015_RS12655 PF00883 Cytosol aminopeptidase family, catalytic domain WM2015_RS12655 PF02789 Cytosol aminopeptidase family, N-terminal domain WM2015_RS12665 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS12665 PF00072 Response regulator receiver domain WM2015_RS12675 PF02470 MlaD protein WM2015_RS12675 PF03886 ABC-type transport auxiliary lipoprotein component WM2015_RS12680 PF00005 ABC transporter WM2015_RS12695 PF13193 AMP-binding enzyme C-terminal domain WM2015_RS12695 PF16177 Acetyl-coenzyme A synthetase N-terminus WM2015_RS12695 PF00501 AMP-binding enzyme WM2015_RS12700 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS12700 PF00072 Response regulator receiver domain WM2015_RS12710 PF01476 LysM domain WM2015_RS12710 PF04972 BON domain WM2015_RS12715 PF01627 Hpt domain WM2015_RS12715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS12715 PF00672 HAMP domain WM2015_RS12715 PF00072 Response regulator receiver domain WM2015_RS12715 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS12725 PF00474 Sodium:solute symporter family WM2015_RS12740 PF00929 Exonuclease WM2015_RS12745 PF00571 CBS domain WM2015_RS12745 PF00478 IMP dehydrogenase / GMP reductase domain WM2015_RS12755 PF00069 Protein kinase domain WM2015_RS12755 PF03793 PASTA domain WM2015_RS12795 PF00563 EAL domain WM2015_RS12795 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS12795 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS12815 PF02129 X-Pro dipeptidyl-peptidase (S15 family) WM2015_RS12820 PF03969 AFG1-like ATPase WM2015_RS12835 PF09317 Domain of unknown function (DUF1974) WM2015_RS12835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_RS12835 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS12835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS12840 PF00593 TonB dependent receptor WM2015_RS12840 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS12845 PF02424 ApbE family WM2015_RS12850 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS12865 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS12875 PF02225 PA domain WM2015_RS12875 PF04389 Peptidase family M28 WM2015_RS12880 PF00293 NUDIX domain WM2015_RS12885 PF01032 FecCD transport family WM2015_RS12890 PF00005 ABC transporter WM2015_RS12895 PF14403 Circularly permuted ATP-grasp type 2 WM2015_RS12900 PF14403 Circularly permuted ATP-grasp type 2 WM2015_RS12900 PF04168 A predicted alpha-helical domain with a conserved ER motif. WM2015_RS12905 PF10005 zinc-ribbon domain WM2015_RS12905 PF15887 Putative zinc-binding metallo-peptidase WM2015_RS12915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WM2015_RS12920 PF00873 AcrB/AcrD/AcrF family WM2015_RS12925 PF00563 EAL domain WM2015_RS12925 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS12925 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS12925 PF13188 PAS domain WM2015_RS12930 PF12627 Probable RNA and SrmB- binding site of polymerase A WM2015_RS12930 PF01966 HD domain WM2015_RS12930 PF01743 Poly A polymerase head domain WM2015_RS12940 PF14718 Soluble lytic murein transglycosylase L domain WM2015_RS12940 PF01464 Transglycosylase SLT domain WM2015_RS12945 PF01925 Sulfite exporter TauE/SafE WM2015_RS12955 PF01323 DSBA-like thioredoxin domain WM2015_RS12960 PF00034 Cytochrome c WM2015_RS12965 PF01926 50S ribosome-binding GTPase WM2015_RS12970 PF07238 PilZ domain WM2015_RS12975 PF01207 Dihydrouridine synthase (Dus) WM2015_RS13000 PF08401 Domain of unknown function (DUF1738) WM2015_RS13000 PF18818 Metallopeptidase superfamily domain WM2015_RS13000 PF13362 Toprim domain WM2015_RS13025 PF01026 TatD related DNase WM2015_RS13030 PF00115 Cytochrome C and Quinol oxidase polypeptide I WM2015_RS13035 PF04304 Protein of unknown function (DUF454) WM2015_RS13045 PF02082 Transcriptional regulator WM2015_RS13060 PF02472 Biopolymer transport protein ExbD/TolR WM2015_RS13065 PF12804 MobA-like NTP transferase domain WM2015_RS13065 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_RS13070 PF01612 3'-5' exonuclease WM2015_RS13070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WM2015_RS13070 PF00476 DNA polymerase family A WM2015_RS13070 PF01367 5'-3' exonuclease, C-terminal SAM fold WM2015_RS13080 PF00398 Ribosomal RNA adenine dimethylase WM2015_RS13085 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WM2015_RS13090 PF00639 PPIC-type PPIASE domain WM2015_RS13090 PF09312 SurA N-terminal domain WM2015_RS13095 PF04453 LPS transport system D WM2015_RS13095 PF03968 OstA-like protein WM2015_RS13135 PF13191 AAA ATPase domain WM2015_RS13135 PF00069 Protein kinase domain WM2015_RS13145 PF03176 MMPL family WM2015_RS13155 PF07044 Protein of unknown function (DUF1329) WM2015_RS13190 PF02350 UDP-N-acetylglucosamine 2-epimerase WM2015_RS13215 PF00795 Carbon-nitrogen hydrolase WM2015_RS13225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WM2015_RS13225 PF07992 Pyridine nucleotide-disulphide oxidoreductase WM2015_RS13230 PF03793 PASTA domain WM2015_RS13230 PF00069 Protein kinase domain WM2015_RS13245 PF00364 Biotin-requiring enzyme WM2015_RS13245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WM2015_RS13245 PF02817 e3 binding domain WM2015_RS13250 PF00456 Transketolase, thiamine diphosphate binding domain WM2015_RS13250 PF17831 Pyruvate dehydrogenase E1 component middle domain WM2015_RS13255 PF04199 Putative cyclase WM2015_RS13265 PF00390 Malic enzyme, N-terminal domain WM2015_RS13265 PF01515 Phosphate acetyl/butaryl transferase WM2015_RS13265 PF03949 Malic enzyme, NAD binding domain WM2015_RS13270 PF00274 Fructose-bisphosphate aldolase class-I WM2015_RS13275 PF00224 Pyruvate kinase, barrel domain WM2015_RS13275 PF02887 Pyruvate kinase, alpha/beta domain WM2015_RS13280 PF02798 Glutathione S-transferase, N-terminal domain WM2015_RS13285 PF04231 Endonuclease I WM2015_RS13290 PF01804 Penicillin amidase WM2015_RS13300 PF09722 Protein of unknown function (DUF2384) WM2015_RS13305 PF01381 Helix-turn-helix WM2015_RS13320 PF07411 Domain of unknown function (DUF1508) WM2015_RS13325 PF00144 Beta-lactamase WM2015_RS13345 PF08281 Sigma-70, region 4 WM2015_RS13345 PF04542 Sigma-70 region 2 WM2015_RS13360 PF17151 Periplasmic sensor domain WM2015_RS13360 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS13365 PF00535 Glycosyl transferase family 2 WM2015_RS13375 PF04235 Protein of unknown function (DUF418) WM2015_RS13375 PF07786 Protein of unknown function (DUF1624) WM2015_RS13380 PF00144 Beta-lactamase WM2015_RS13395 PF01435 Peptidase family M48 WM2015_RS13405 PF00005 ABC transporter WM2015_RS13410 PF00563 EAL domain WM2015_RS13410 PF13188 PAS domain WM2015_RS13410 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS13410 PF03707 Bacterial signalling protein N terminal repeat WM2015_RS13420 PF01979 Amidohydrolase family WM2015_RS13420 PF01979 Amidohydrolase family WM2015_RS13460 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal WM2015_RS13460 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal WM2015_RS13465 PF03621 MbtH-like protein WM2015_RS13485 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS13485 PF00593 TonB dependent receptor WM2015_RS13505 PF08007 Cupin superfamily protein WM2015_RS13510 PF00156 Phosphoribosyl transferase domain WM2015_RS13510 PF05139 Erythromycin esterase WM2015_RS13530 PF00679 Elongation factor G C-terminus WM2015_RS13530 PF03764 Elongation factor G, domain IV WM2015_RS13530 PF00009 Elongation factor Tu GTP binding domain WM2015_RS13530 PF03144 Elongation factor Tu domain 2 WM2015_RS13530 PF14492 Elongation Factor G, domain II WM2015_RS13540 PF02906 Iron only hydrogenase large subunit, C-terminal domain WM2015_RS13540 PF02256 Iron hydrogenase small subunit WM2015_RS13540 PF00037 4Fe-4S binding domain WM2015_RS13540 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WM2015_RS13565 PF13419 Haloacid dehalogenase-like hydrolase WM2015_RS13575 PF00144 Beta-lactamase WM2015_RS13580 PF01541 GIY-YIG catalytic domain WM2015_RS13595 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding WM2015_RS13595 PF18381 YcaO cyclodehydratase C-terminal domain WM2015_RS13605 PF00595 PDZ domain WM2015_RS13610 PF00085 Thioredoxin WM2015_RS13640 PF13683 Integrase core domain WM2015_RS13640 PF13276 HTH-like domain WM2015_RS13655 PF00162 Phosphoglycerate kinase WM2015_RS13660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WM2015_RS13660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WM2015_RS13665 PF00456 Transketolase, thiamine diphosphate binding domain WM2015_RS13665 PF02780 Transketolase, C-terminal domain WM2015_RS13665 PF02779 Transketolase, pyrimidine binding domain WM2015_RS13685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS13685 PF08521 Two-component sensor kinase N-terminal WM2015_RS13685 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS13690 PF00486 Transcriptional regulatory protein, C terminal WM2015_RS13690 PF00072 Response regulator receiver domain WM2015_RS13695 PF00437 Type II/IV secretion system protein WM2015_RS13700 PF00437 Type II/IV secretion system protein WM2015_RS13705 PF01168 Alanine racemase, N-terminal domain WM2015_RS13710 PF14748 Pyrroline-5-carboxylate reductase dimerisation WM2015_RS13710 PF03807 NADP oxidoreductase coenzyme F420-dependent WM2015_RS13715 PF02325 YGGT family WM2015_RS13735 PF01433 Peptidase family M1 domain WM2015_RS13740 PF00543 Nitrogen regulatory protein P-II WM2015_RS13745 PF04380 Membrane fusogenic activity WM2015_RS13750 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS13750 PF08448 PAS fold WM2015_RS13750 PF00563 EAL domain WM2015_RS13755 PF01078 Magnesium chelatase, subunit ChlI WM2015_RS13755 PF13335 Magnesium chelatase, subunit ChlI C-terminal WM2015_RS13760 PF07244 Surface antigen variable number repeat WM2015_RS13760 PF01103 Surface antigen WM2015_RS13770 PF01040 UbiA prenyltransferase family WM2015_RS13800 PF13673 Acetyltransferase (GNAT) domain WM2015_RS13800 PF00958 GMP synthase C terminal domain WM2015_RS13800 PF00117 Glutamine amidotransferase class-I WM2015_RS13800 PF03352 Methyladenine glycosylase WM2015_RS13800 PF13302 Acetyltransferase (GNAT) domain WM2015_RS13820 PF00072 Response regulator receiver domain WM2015_RS13825 PF17149 Periplasmic sensor domain found in signal transduction proteins WM2015_RS13825 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS13825 PF01627 Hpt domain WM2015_RS13825 PF00072 Response regulator receiver domain WM2015_RS13825 PF00672 HAMP domain WM2015_RS13830 PF04337 Protein of unknown function, DUF480 WM2015_RS13835 PF00313 'Cold-shock' DNA-binding domain WM2015_RS13840 PF12911 N-terminal TM domain of oligopeptide transport permease C WM2015_RS13840 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS13845 PF00528 Binding-protein-dependent transport system inner membrane component WM2015_RS13855 PF00989 PAS fold WM2015_RS13855 PF01590 GAF domain WM2015_RS13855 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS13855 PF00563 EAL domain WM2015_RS13870 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WM2015_RS13870 PF01926 50S ribosome-binding GTPase WM2015_RS13880 PF00115 Cytochrome C and Quinol oxidase polypeptide I WM2015_RS13890 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP WM2015_RS13890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WM2015_RS13900 PF12801 4Fe-4S binding domain WM2015_RS13900 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase WM2015_RS13900 PF13746 4Fe-4S dicluster domain WM2015_RS13910 PF00403 Heavy-metal-associated domain WM2015_RS13950 PF04055 Radical SAM superfamily WM2015_RS13950 PF06969 HemN C-terminal domain WM2015_RS13955 PF00027 Cyclic nucleotide-binding domain WM2015_RS13955 PF13545 Crp-like helix-turn-helix domain WM2015_RS13985 PF03951 Glutamine synthetase, beta-Grasp domain WM2015_RS13985 PF00120 Glutamine synthetase, catalytic domain WM2015_RS13995 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS13995 PF00989 PAS fold WM2015_RS14000 PF00072 Response regulator receiver domain WM2015_RS14000 PF02954 Bacterial regulatory protein, Fis family WM2015_RS14000 PF00158 Sigma-54 interaction domain WM2015_RS14005 PF02580 D-Tyr-tRNA(Tyr) deacylase WM2015_RS14015 PF07311 Dodecin WM2015_RS14020 PF01435 Peptidase family M48 WM2015_RS14025 PF04011 LemA family WM2015_RS14030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) WM2015_RS14030 PF00072 Response regulator receiver domain WM2015_RS14030 PF01627 Hpt domain WM2015_RS14030 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS14030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS14030 PF00672 HAMP domain WM2015_RS14040 PF08241 Methyltransferase domain WM2015_RS14045 PF00593 TonB dependent receptor WM2015_RS14045 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS14050 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain WM2015_RS14050 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain WM2015_RS14060 PF03793 PASTA domain WM2015_RS14060 PF00069 Protein kinase domain WM2015_RS14075 PF00069 Protein kinase domain WM2015_RS14075 PF03793 PASTA domain WM2015_RS14100 PF00158 Sigma-54 interaction domain WM2015_RS14100 PF02954 Bacterial regulatory protein, Fis family WM2015_RS14105 PF03793 PASTA domain WM2015_RS14105 PF00069 Protein kinase domain WM2015_RS14135 PF00009 Elongation factor Tu GTP binding domain WM2015_RS14135 PF16658 Class II release factor RF3, C-terminal domain WM2015_RS14165 PF01022 Bacterial regulatory protein, arsR family WM2015_RS14170 PF08525 Opacity-associated protein A N-terminal motif WM2015_RS14170 PF01551 Peptidase family M23 WM2015_RS14170 PF01476 LysM domain WM2015_RS14175 PF03315 Serine dehydratase beta chain WM2015_RS14175 PF03313 Serine dehydratase alpha chain WM2015_RS14185 PF01266 FAD dependent oxidoreductase WM2015_RS14205 PF13684 Dihydroxyacetone kinase family WM2015_RS14205 PF02734 DAK2 domain WM2015_RS14210 PF02660 Glycerol-3-phosphate acyltransferase WM2015_RS14215 PF03099 Biotin/lipoate A/B protein ligase family WM2015_RS14215 PF02237 Biotin protein ligase C terminal domain WM2015_RS14220 PF03309 Type III pantothenate kinase WM2015_RS14230 PF01040 UbiA prenyltransferase family WM2015_RS14235 PF00156 Phosphoribosyl transferase domain WM2015_RS14240 PF06968 Biotin and Thiamin Synthesis associated domain WM2015_RS14240 PF04055 Radical SAM superfamily WM2015_RS14245 PF00155 Aminotransferase class I and II WM2015_RS14250 PF12697 Alpha/beta hydrolase family WM2015_RS14255 PF13649 Methyltransferase domain WM2015_RS14265 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS14265 PF00072 Response regulator receiver domain WM2015_RS14270 PF00512 His Kinase A (phospho-acceptor) domain WM2015_RS14270 PF01627 Hpt domain WM2015_RS14270 PF00672 HAMP domain WM2015_RS14270 PF00072 Response regulator receiver domain WM2015_RS14270 PF17149 Periplasmic sensor domain found in signal transduction proteins WM2015_RS14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WM2015_RS14285 PF07152 YaeQ protein WM2015_RS14315 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS14320 PF00106 short chain dehydrogenase WM2015_RS14330 PF00875 DNA photolyase WM2015_RS14330 PF03441 FAD binding domain of DNA photolyase WM2015_RS14345 PF01850 PIN domain WM2015_RS14405 PF02384 N-6 DNA Methylase WM2015_RS14405 PF12161 HsdM N-terminal domain WM2015_RS14455 PF11490 DNA polymerase III polC-type N-terminus II WM2015_RS14455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WM2015_RS14455 PF14579 Helix-hairpin-helix motif WM2015_RS14455 PF02811 PHP domain WM2015_RS14455 PF00929 Exonuclease WM2015_RS14455 PF07733 Bacterial DNA polymerase III alpha NTPase domain WM2015_RS14455 PF14480 DNA polymerase III polC-type N-terminus I WM2015_RS14460 PF00929 Exonuclease WM2015_RS14475 PF05016 ParE toxin of type II toxin-antitoxin system, parDE WM2015_RS14480 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH WM2015_RS14485 PF01209 ubiE/COQ5 methyltransferase family WM2015_RS14515 PF17820 PDZ domain WM2015_RS14515 PF02163 Peptidase family M50 WM2015_RS14540 PF03737 Aldolase/RraA WM2015_RS14550 PF01145 SPFH domain / Band 7 family WM2015_RS14560 PF02146 Sir2 family WM2015_RS14570 PF02678 Pirin WM2015_RS14570 PF05726 Pirin C-terminal cupin domain WM2015_RS14575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM2015_RS14580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WM2015_RS14590 PF03435 Saccharopine dehydrogenase NADP binding domain WM2015_RS14595 PF01979 Amidohydrolase family WM2015_RS14605 PF00781 Diacylglycerol kinase catalytic domain WM2015_RS14620 PF04461 Protein of unknown function (DUF520) WM2015_RS14625 PF01553 Acyltransferase WM2015_RS14630 PF00962 Adenosine/AMP deaminase WM2015_RS14640 PF07690 Major Facilitator Superfamily WM2015_RS14645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WM2015_RS14645 PF12806 Acetyl-CoA dehydrogenase C-terminal like WM2015_RS14645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WM2015_RS14645 PF02770 Acyl-CoA dehydrogenase, middle domain WM2015_RS14675 PF01906 Putative heavy-metal-binding WM2015_RS14695 PF01565 FAD binding domain WM2015_RS14695 PF02913 FAD linked oxidases, C-terminal domain WM2015_RS14700 PF01979 Amidohydrolase family WM2015_RS14705 PF01699 Sodium/calcium exchanger protein WM2015_RS14730 PF02678 Pirin WM2015_RS14730 PF05726 Pirin C-terminal cupin domain WM2015_RS14735 PF02525 Flavodoxin-like fold WM2015_RS14795 PF05661 Protein of unknown function (DUF808) WM2015_RS14800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WM2015_RS14810 PF02233 NAD(P) transhydrogenase beta subunit WM2015_RS14815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain WM2015_RS14815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain WM2015_RS14815 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch WM2015_RS14830 PF08240 Alcohol dehydrogenase GroES-like domain WM2015_RS14830 PF00107 Zinc-binding dehydrogenase WM2015_RS14840 PF00534 Glycosyl transferases group 1 WM2015_RS14840 PF13439 Glycosyltransferase Family 4 WM2015_RS14855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WM2015_RS14855 PF01872 RibD C-terminal domain WM2015_RS14860 PF00925 GTP cyclohydrolase II WM2015_RS14865 PF02633 Creatinine amidohydrolase WM2015_RS14870 PF07715 TonB-dependent Receptor Plug Domain WM2015_RS14870 PF00593 TonB dependent receptor WM2015_RS14910 PF17284 Spermidine synthase tetramerisation domain WM2015_RS14915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WM2015_RS14915 PF17944 Arginine decarboxylase C-terminal helical extension WM2015_RS14915 PF17810 Arginine decarboxylase helical bundle domain WM2015_RS14920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase WM2015_RS14920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase WM2015_RS14925 PF01483 Proprotein convertase P-domain WM2015_RS14940 PF01235 Sodium:alanine symporter family WM2015_RS14945 PF07995 Glucose / Sorbosone dehydrogenase WM2015_RS14960 PF05746 DALR anticodon binding domain WM2015_RS14960 PF00750 tRNA synthetases class I (R) WM2015_RS14960 PF03485 Arginyl tRNA synthetase N terminal domain WM2015_RS14965 PF00132 Bacterial transferase hexapeptide (six repeats) WM2015_RS14970 PF00248 Aldo/keto reductase family WM2015_RS14980 PF00082 Subtilase family WM2015_RS14980 PF05922 Peptidase inhibitor I9 WM2015_RS14985 PF00082 Subtilase family WM2015_RS14985 PF05922 Peptidase inhibitor I9 WM2015_RS14985 PF02225 PA domain WM2015_RS14985 PF13860 FlgD Ig-like domain WM2015_RS15000 PF01061 ABC-2 type transporter WM2015_RS15005 PF00005 ABC transporter WM2015_RS15015 PF00005 ABC transporter WM2015_RS15020 PF12679 ABC-2 family transporter protein WM2015_RS15030 PF01380 SIS domain WM2015_RS15060 PF01634 ATP phosphoribosyltransferase WM2015_RS15060 PF08029 HisG, C-terminal domain WM2015_RS15065 PF00815 Histidinol dehydrogenase WM2015_RS15070 PF00155 Aminotransferase class I and II WM2015_RS15075 PF00475 Imidazoleglycerol-phosphate dehydratase WM2015_RS15075 PF08645 Polynucleotide kinase 3 phosphatase WM2015_RS15080 PF00117 Glutamine amidotransferase class-I WM2015_RS15085 PF00977 Histidine biosynthesis protein WM2015_RS15090 PF00977 Histidine biosynthesis protein WM2015_RS15095 PF01502 Phosphoribosyl-AMP cyclohydrolase WM2015_RS15095 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WM2015_RS15100 PF05231 MASE1 WM2015_RS15100 PF00563 EAL domain WM2015_RS15105 PF02633 Creatinine amidohydrolase WM2015_RS15115 PF00109 Beta-ketoacyl synthase, N-terminal domain WM2015_RS15115 PF02801 Beta-ketoacyl synthase, C-terminal domain WM2015_RS15130 PF01266 FAD dependent oxidoreductase WM2015_RS15140 PF04820 Tryptophan halogenase WM2015_RS15145 PF00550 Phosphopantetheine attachment site WM2015_RS15155 PF13193 AMP-binding enzyme C-terminal domain WM2015_RS15155 PF00501 AMP-binding enzyme WM2015_RS15160 PF07977 FabA-like domain WM2015_RS15190 PF04235 Protein of unknown function (DUF418) WM2015_RS15225 PF04191 Phospholipid methyltransferase WM2015_RS15255 PF01177 Asp/Glu/Hydantoin racemase WM2015_RS15260 PF01661 Macro domain WM2015_RS15265 PF12697 Alpha/beta hydrolase family WM2015_RS15275 PF00072 Response regulator receiver domain WM2015_RS15275 PF00196 Bacterial regulatory proteins, luxR family WM2015_RS15280 PF07730 Histidine kinase WM2015_RS15335 PF01548 Transposase WM2015_RS15335 PF02371 Transposase IS116/IS110/IS902 family WM2015_RS15350 PF02371 Transposase IS116/IS110/IS902 family WM2015_RS15350 PF01548 Transposase WM2015_RS15360 PF01548 Transposase WM2015_RS15360 PF02371 Transposase IS116/IS110/IS902 family WM2015_RS15370 PF00589 Phage integrase family WM2015_RS15370 PF13495 Phage integrase, N-terminal SAM-like domain WM2015_RS15375 PF00202 Aminotransferase class-III WM2015_RS15385 PF00301 Rubredoxin WM2015_RS15390 PF00149 Calcineurin-like phosphoesterase WM2015_RS15400 PF13361 UvrD-like helicase C-terminal domain WM2015_RS15400 PF00580 UvrD/REP helicase N-terminal domain WM2015_RS15410 PF00265 Thymidine kinase WM2015_RS15415 PF00360 Phytochrome region WM2015_RS15415 PF00563 EAL domain WM2015_RS15415 PF01590 GAF domain WM2015_RS15415 PF00990 Diguanylate cyclase, GGDEF domain WM2015_RS15420 PF03466 LysR substrate binding domain WM2015_RS15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WM2015_RS15425 PF00892 EamA-like transporter family WM2015_RS15430 PF13409 Glutathione S-transferase, N-terminal domain WM2015_RS15440 PF01926 50S ribosome-binding GTPase WM2015_RS15440 PF12631 MnmE helical domain WM2015_RS15440 PF10396 GTP-binding protein TrmE N-terminus WM2015_RS15445 PF14849 YidC periplasmic domain WM2015_RS15445 PF02096 60Kd inner membrane protein WM2015_RS15450 PF00825 Ribonuclease P WM2015_RS15455 PF00468 Ribosomal protein L34