LOCUS       NC_038973               1370 bp    DNA     circular VRL 24-AUG-2018
DEFINITION  Whitefly associated Guatemala alphasatellite 2 isolate GtTo2-1,
            complete sequence.
ACCESSION   NC_038973
VERSION     NC_038973.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Whitefly associated Guatemala alphasatellite 2
  ORGANISM  Whitefly associated Guatemala alphasatellite 2
            Viruses; Satellites; Satellite Nucleic Acids; Single stranded DNA
            satellites; Alphasatellitidae; Geminialphasatellitinae;
            Clecrusatellite.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Rosario,K., Marr,C., Varsani,A., Kraberger,S., Stainton,D.,
            Moriones,E., Polston,J.E. and Breitbart,M.
  TITLE     Begomovirus-Associated Satellite DNA Diversity Captured Through
            Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies
            (Aleyrodidae)
  JOURNAL   Viruses 8 (2), 36 (2016)
   PUBMED   26848679
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-AUG-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1370)
  AUTHORS   Rosario,K., Seah,Y.M., Marr,C., Varsani,A., Polston,J.E., Duffy,S.
            and Breitbart,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAY-2015) Marine Science, University of South
            Florida, 140 7th Ave S, St. Petersburg, FL 33701, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KT099170.
            
            ##Assembly-Data-START##
            Assembly Method       :: Geneious (Biomatters) v. R7; Sequencher
                                     (Gene Codes) v. 4.1.4
            Sequencing Technology :: Sanger dideoxy sequencing; 454
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Whitefly associated Guatemala alphasatellite 2"
                     /mol_type="genomic DNA"
                     /isolate="GtTo2-1"
                     /isolation_source="whiteflies feeding on tomato"
                     /host="unidentified plant"
                     /db_xref="taxon:2169828"
                     /country="Guatemala"
                     /collection_date="Jan-2012"
                     /note="VEM; vector enabled metagenomics"
     stem_loop       join(1362..1370,1..17)
                     /note="contains conserved nanovirus-like nonanucleotide
                     motif TAGTATTAC"
     gene            66..1007
                     /locus_tag="D1T76_gp1"
                     /db_xref="GeneID:37619787"
     CDS             66..1007
                     /locus_tag="D1T76_gp1"
                     /note="Rep"
                     /codon_start=1
                     /product="replication initiator protein"
                     /protein_id="YP_009508354.1"
                     /db_xref="GeneID:37619787"
                     /translation="MSQQRNWCFTLFNYVLPLFSVLPPWANYIVYQEEICPDTSRKHI
                     QGFINLKRPQRFSFLKKNLPDGAHIESCKGSASSNRDYCTKDASRFAGPWEFGVFAES
                     GSNKRKTMERFQDDPEELRLADPKLYRRCLATKVNFEFSSVVLPVFDRPWQLLVEKIL
                     NEGIDDRTIIWVYGSQGNEGKTTWAKKKVQDAWFYSRGGKGENIKYQYVEHLGNCIFD
                     IPRQVEDNLQYTVLEEIKDRLIRSSKYEPIDVNSRDNVHVVVLSNFLPQLDVEYDSRG
                     NVVKRQLLSRDRLCIVNIDDGTVTRDNSVISFHDFLE"
ORIGIN      
        1 tagtattacc cagcctcgtc ccaaaacctc gtcccattga ctagtcaaca cattttctct
       61 ctaaaatgtc tcaacagcga aattggtgct ttactctttt taattacgtt cttcctcttt
      121 tctctgttct tcctccttgg gcgaattaca ttgtttatca ggaagaaatt tgccctgata
      181 cttcccggaa acacattcaa ggttttataa atttgaaacg tcctcaaagg ttttcttttt
      241 tgaagaaaaa tttgcccgat ggagctcata tcgaatcctg taaaggttct gcatccagca
      301 atagagatta ttgcacaaag gatgcttcta gatttgccgg gccctgggaa tttggtgtgt
      361 tcgcggagtc tgggagcaac aagaggaaaa cgatggaacg ctttcaggat gacccagaag
      421 aactccgatt ggccgaccct aaactctatc gtcgatgcct ggcgactaag gttaatttcg
      481 agttctcgtc tgtggttctg cctgtatttg accgaccttg gcagttgctg gttgagaaga
      541 tactcaacga aggcattgat gaccgaacta tcatatgggt gtatggctct cagggtaatg
      601 aaggaaaaac cacatgggcg aagaagaagg tacaagatgc atggttctac tcacgcggag
      661 gtaaaggtga gaacatcaag taccagtatg tcgaacatct aggcaactgt attttcgaca
      721 ttcctcgtca ggtggaagat aatttacagt atactgtatt agaggaaata aaagatcggt
      781 taattaggtc ttctaaatat gagcccattg atgtaaattc tagggataat gtccatgtag
      841 ttgtcctgtc taattttctt cctcagttag atgttgaata tgatagccgt ggtaatgtag
      901 ttaagcgtca gttgttgagt agagataggt tgtgtattgt taatattgat gatggtacag
      961 taactaggga taattctgta atatcctttc atgatttttt ggaataaaat agtttttgtt
     1021 tcttttttaa aaaagaaaat aagaaaagaa aaaagatccg caaagaaacc ctaatgggcc
     1081 gaatcaagga ggcccaataa gacaaatcat atattgaaaa tgggctgcgc agctgcagtg
     1141 ggccgaacaa agagggacct agccgagtgt ccacacgagt cgtagggtgg gccatttgtg
     1201 agtccatgtt ccctctcatc taattggaca tcccttttta attggattgc tgacatgtca
     1261 cttggttttg tttataccgg atataaccgg taactaacac acgtgaccgg ttactttata
     1321 tacaatagga gtactggaaa ctgggacgag ctcctacata agaggctggc
//