LOCUS       NC_038974               1359 bp    DNA     circular VRL 07-SEP-2018
DEFINITION  Whitefly associated Guetamala alphasatellite 1 isolate GtTo2-2,
            complete sequence.
ACCESSION   NC_038974
VERSION     NC_038974.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Whitefly associated Guetamala alphasatellite 1
  ORGANISM  Whitefly associated Guetamala alphasatellite 1
            Viruses; Satellites; Satellite Nucleic Acids; Single stranded DNA
            satellites; Alphasatellitidae; Geminialphasatellitinae; unassigned
            Geminialphasatellitinae.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Rosario,K., Marr,C., Varsani,A., Kraberger,S., Stainton,D.,
            Moriones,E., Polston,J.E. and Breitbart,M.
  TITLE     Begomovirus-Associated Satellite DNA Diversity Captured Through
            Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies
            (Aleyrodidae)
  JOURNAL   Viruses 8 (2), 36 (2016)
   PUBMED   26848679
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1359)
  AUTHORS   Rosario,K., Seah,Y.M., Marr,C., Varsani,A., Polston,J.E., Duffy,S.
            and Breitbart,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAY-2015) Marine Science, University of South
            Florida, 140 7th Ave S, St. Petersburg, FL 33701, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KT099172.
            
            ##Assembly-Data-START##
            Assembly Method       :: Geneious (Biomatters) v. R7; Sequencher
                                     (Gene Codes) v. 4.1.4
            Sequencing Technology :: Sanger dideoxy sequencing; 454
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Whitefly associated Guetamala alphasatellite 1"
                     /mol_type="genomic DNA"
                     /isolate="GtTo2-2"
                     /isolation_source="whiteflies feeding on tomato"
                     /host="unidentified plant"
                     /db_xref="taxon:2169906"
                     /country="Guatemala"
                     /collection_date="Jan-2012"
                     /note="VEM; vector enabled metagenomics"
     stem_loop       join(1348..1359,1..18)
                     /note="contains conserved nanovirus-like nonanucleotide
                     motif TAGTATTAC"
     gene            74..1018
                     /locus_tag="D1T77_gp1"
                     /db_xref="GeneID:37785003"
     CDS             74..1018
                     /locus_tag="D1T77_gp1"
                     /note="Rep"
                     /codon_start=1
                     /product="replication initiator protein"
                     /protein_id="YP_009508355.1"
                     /db_xref="GeneID:37785003"
                     /translation="MKTPQSIWWCFTIFFASAGAPELFPLFENTSVSYACWQEEESPT
                     THRRHLQGYLQLKSKKTLNQVKALFGDLNPHLEKQRARNSDDARDYCLKEASRVSGPW
                     EFGEYCPSGSHKRRQREQVQKSPERMMEENPSVYRRVKARLSIEAHQLSLSELPFLLK
                     PWQFEIERVISRPASTRDIIWVYGSTGGEGKSTYARELLRRGWFYTRGGSVDNVAYQY
                     LDNVDRDVVFDIPRDKKDYLQYSLIEMIKDGVIISNKYEPVTAVCSRPRHVVVMSNFL
                     PDFSKISVDRVSVIPCIPCGLCLNCHSSDVFCLEFNNE"
ORIGIN      
        1 tagtattacc cagcttggat atttcagctt ggatatttcc gtacgctttc tctctatatt
       61 ctctctatat aaaatgaaga ctccccaaag tatttggtgg tgtttcacta ttttttttgc
      121 ctctgccggt gcccctgagc tcttcccctt gttcgaaaat acctctgttt cttatgcttg
      181 ttggcaggag gaggagtcac ctaccactca ccgtcgccat ttgcagggtt atcttcaatt
      241 gaagagtaaa aaaaccctaa atcaggtgaa agccctcttt ggtgacttga acccccatct
      301 ggagaaacag agggctcgta attccgatga cgctcgggat tactgcttga aggaggcttc
      361 tagggtttct ggtccctggg aatttgggga gtattgtcct tctggttctc ataaacgccg
      421 gcaacgtgag caggttcaaa aatcgccgga gaggatgatg gaagaaaacc cttcagtcta
      481 ccgaagggtc aaggcgcgtc tttctataga ggcccaccaa ttgtcattgt ctgagcttcc
      541 ttttctgttg aagccctggc aattcgagat tgagcgggta atttcccgcc cagcctctac
      601 tcgtgacatc atttgggtgt atggctctac tggtggtgaa gggaagtcca cgtatgccag
      661 ggaattactc agaaggggtt ggttctacac acgtggtggc tctgtagata acgtagccta
      721 tcagtattta gacaacgtag atagggatgt agtttttgat attcctaggg ataagaaaga
      781 ttatctccaa tattctttga tcgaaatgat taaggacgga gtaatcatta gtaataagta
      841 cgagcctgta actgccgttt gtagtaggcc tcgtcatgtt gttgtaatgt ctaattttct
      901 tcctgatttt tccaagatta gtgtagatag ggttagtgtt attccgtgta tcccctgtgg
      961 tttgtgtctt aattgtcatt cttctgatgt attctgttta gaatttaata atgaataaaa
     1021 aaaattttgc ttctttgtga aaagaaggaa tgaaatgaaa aaaaagaaga aatgccctct
     1081 attttaattc tcaaataata tataaaaata aggcaacgca gttgcggtgt gccgaacaaa
     1141 gagggaccta gccgagtgtc cacacgagtc gtagggtggg ccatttgtga gtccatgttc
     1201 cctctcatct attaattaaa ccccaactgg acttatgtct tattgggcct ttttttatgg
     1261 gcttcctata tatgggcctg tatcatatgg gcttttttta atgtagatga aatgtctatt
     1321 ttgccctcgt atccaaggat ataaatacca agctggtga
//