locus-tag class description HM988_RS00045 PF12146 Serine aminopeptidase, S33 HM988_RS00050 PF00294 pfkB family carbohydrate kinase HM988_RS00070 PF07715 TonB-dependent Receptor Plug Domain HM988_RS00070 PF00593 TonB dependent receptor HM988_RS00075 PF08244 Glycosyl hydrolases family 32 C terminal HM988_RS00075 PF00251 Glycosyl hydrolases family 32 N-terminal domain HM988_RS00080 PF00083 Sugar (and other) transporter HM988_RS00085 PF12833 Helix-turn-helix domain HM988_RS00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS00085 PF07495 Y_Y_Y domain HM988_RS00085 PF07494 Two component regulator propeller HM988_RS00085 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS00085 PF00072 Response regulator receiver domain HM988_RS00110 PF00873 AcrB/AcrD/AcrF family HM988_RS00120 PF12848 ABC transporter HM988_RS00120 PF16326 ABC transporter C-terminal domain HM988_RS00120 PF00005 ABC transporter HM988_RS00130 PF01266 FAD dependent oxidoreductase HM988_RS00150 PF03781 Sulfatase-modifying factor enzyme 1 HM988_RS00160 PF01131 DNA topoisomerase HM988_RS00160 PF01751 Toprim domain HM988_RS00160 PF13368 Topoisomerase C-terminal repeat HM988_RS00175 PF00919 Uncharacterized protein family UPF0004 HM988_RS00175 PF01938 TRAM domain HM988_RS00175 PF04055 Radical SAM superfamily HM988_RS00180 PF00158 Sigma-54 interaction domain HM988_RS00180 PF00072 Response regulator receiver domain HM988_RS00180 PF02954 Bacterial regulatory protein, Fis family HM988_RS00205 PF00166 Chaperonin 10 Kd subunit HM988_RS00210 PF00118 TCP-1/cpn60 chaperonin family HM988_RS00265 PF00027 Cyclic nucleotide-binding domain HM988_RS00265 PF00520 Ion transport protein HM988_RS00270 PF01926 50S ribosome-binding GTPase HM988_RS00270 PF01018 GTP1/OBG HM988_RS00280 PF02222 ATP-grasp domain HM988_RS00280 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HM988_RS00295 PF00731 AIR carboxylase HM988_RS00300 PF01432 Peptidase family M3 HM988_RS00330 PF08338 Domain of unknown function (DUF1731) HM988_RS00330 PF01370 NAD dependent epimerase/dehydratase family HM988_RS00360 PF02347 Glycine cleavage system P-protein HM988_RS00365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HM988_RS00365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HM988_RS00395 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase HM988_RS00400 PF02405 Permease MlaE HM988_RS00405 PF00005 ABC transporter HM988_RS00415 PF01050 Mannose-6-phosphate isomerase HM988_RS00415 PF00483 Nucleotidyl transferase HM988_RS00430 PF12450 von Willebrand factor HM988_RS00430 PF12034 Domain of unknown function (DUF3520) HM988_RS00430 PF00092 von Willebrand factor type A domain HM988_RS00455 PF00684 DnaJ central domain HM988_RS00455 PF00226 DnaJ domain HM988_RS00455 PF01556 DnaJ C terminal domain HM988_RS00470 PF04151 Bacterial pre-peptidase C-terminal domain HM988_RS00470 PF04389 Peptidase family M28 HM988_RS00475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HM988_RS00475 PF00364 Biotin-requiring enzyme HM988_RS00475 PF02817 e3 binding domain HM988_RS00480 PF00676 Dehydrogenase E1 component HM988_RS00485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HM988_RS00500 PF03781 Sulfatase-modifying factor enzyme 1 HM988_RS00505 PF02875 Mur ligase family, glutamate ligase domain HM988_RS00505 PF08245 Mur ligase middle domain HM988_RS00505 PF01225 Mur ligase family, catalytic domain HM988_RS00510 PF06983 3-demethylubiquinone-9 3-methyltransferase HM988_RS00530 PF08245 Mur ligase middle domain HM988_RS00530 PF02875 Mur ligase family, glutamate ligase domain HM988_RS00540 PF02472 Biopolymer transport protein ExbD/TolR HM988_RS00545 PF01618 MotA/TolQ/ExbB proton channel family HM988_RS00550 PF03600 Citrate transporter HM988_RS00560 PF03702 Anhydro-N-acetylmuramic acid kinase HM988_RS00565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HM988_RS00565 PF02770 Acyl-CoA dehydrogenase, middle domain HM988_RS00565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HM988_RS00570 PF14493 Helix-turn-helix domain HM988_RS00570 PF05970 PIF1-like helicase HM988_RS00620 PF07715 TonB-dependent Receptor Plug Domain HM988_RS00620 PF00593 TonB dependent receptor HM988_RS00625 PF01351 Ribonuclease HII HM988_RS00650 PF03099 Biotin/lipoate A/B protein ligase family HM988_RS00660 PF01679 Proteolipid membrane potential modulator HM988_RS00665 PF00196 Bacterial regulatory proteins, luxR family HM988_RS00665 PF00072 Response regulator receiver domain HM988_RS00675 PF00085 Thioredoxin HM988_RS00680 PF01336 OB-fold nucleic acid binding domain HM988_RS00680 PF00152 tRNA synthetases class II (D, K and N) HM988_RS00715 PF05360 yiaA/B two helix domain HM988_RS00735 PF00202 Aminotransferase class-III HM988_RS00745 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS00770 PF01175 Urocanase Rossmann-like domain HM988_RS00770 PF17391 Urocanase N-terminal domain HM988_RS00770 PF17392 Urocanase C-terminal domain HM988_RS00780 PF00916 Sulfate permease family HM988_RS00780 PF01740 STAS domain HM988_RS00785 PF00313 'Cold-shock' DNA-binding domain HM988_RS00790 PF00893 Small Multidrug Resistance protein HM988_RS00805 PF01807 CHC2 zinc finger HM988_RS00805 PF10410 DnaB-helicase binding domain of primase HM988_RS00805 PF08275 DNA primase catalytic core, N-terminal domain HM988_RS00810 PF00196 Bacterial regulatory proteins, luxR family HM988_RS00810 PF00072 Response regulator receiver domain HM988_RS00815 PF02540 NAD synthase HM988_RS00865 PF00111 2Fe-2S iron-sulfur cluster binding domain HM988_RS00865 PF00970 Oxidoreductase FAD-binding domain HM988_RS00865 PF00175 Oxidoreductase NAD-binding domain HM988_RS00870 PF05138 Phenylacetic acid catabolic protein HM988_RS00875 PF06243 Phenylacetic acid degradation B HM988_RS00880 PF05138 Phenylacetic acid catabolic protein HM988_RS00885 PF01883 Iron-sulfur cluster assembly protein HM988_RS00890 PF00378 Enoyl-CoA hydratase/isomerase HM988_RS00895 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS00900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HM988_RS00900 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HM988_RS00900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HM988_RS00910 PF04228 Putative neutral zinc metallopeptidase HM988_RS00915 PF02803 Thiolase, C-terminal domain HM988_RS00915 PF00108 Thiolase, N-terminal domain HM988_RS00920 PF01575 MaoC like domain HM988_RS00920 PF00171 Aldehyde dehydrogenase family HM988_RS00930 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS00935 PF01037 Lrp/AsnC ligand binding domain HM988_RS00940 PF00364 Biotin-requiring enzyme HM988_RS00940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HM988_RS00940 PF02817 e3 binding domain HM988_RS00945 PF01063 Amino-transferase class IV HM988_RS00950 PF02779 Transketolase, pyrimidine binding domain HM988_RS00950 PF02780 Transketolase, C-terminal domain HM988_RS00965 PF04542 Sigma-70 region 2 HM988_RS00965 PF08281 Sigma-70, region 4 HM988_RS00970 PF00348 Polyprenyl synthetase HM988_RS00980 PF04055 Radical SAM superfamily HM988_RS00990 PF02547 Queuosine biosynthesis protein HM988_RS00995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HM988_RS01015 PF04307 LexA-binding, inner membrane-associated putative hydrolase HM988_RS01020 PF02580 D-Tyr-tRNA(Tyr) deacylase HM988_RS01025 PF16745 RsgA N-terminal domain HM988_RS01025 PF03193 RsgA GTPase HM988_RS01030 PF00365 Phosphofructokinase HM988_RS01035 PF00793 DAHP synthetase I family HM988_RS01035 PF18152 DAHP synthase ferredoxin-like domain HM988_RS01040 PF01842 ACT domain HM988_RS01040 PF02153 Prephenate dehydrogenase HM988_RS01045 PF00155 Aminotransferase class I and II HM988_RS01050 PF00800 Prephenate dehydratase HM988_RS01050 PF01817 Chorismate mutase type II HM988_RS01055 PF00005 ABC transporter HM988_RS01060 PF01515 Phosphate acetyl/butaryl transferase HM988_RS01060 PF07085 DRTGG domain HM988_RS01065 PF00871 Acetokinase family HM988_RS01080 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS01085 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS01090 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS01095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HM988_RS01100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HM988_RS01100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HM988_RS01105 PF01507 Phosphoadenosine phosphosulfate reductase family HM988_RS01110 PF02082 Transcriptional regulator HM988_RS01115 PF02772 S-adenosylmethionine synthetase, central domain HM988_RS01115 PF02773 S-adenosylmethionine synthetase, C-terminal domain HM988_RS01115 PF00438 S-adenosylmethionine synthetase, N-terminal domain HM988_RS01125 PF00005 ABC transporter HM988_RS01125 PF13732 Domain of unknown function (DUF4162) HM988_RS01130 PF00186 Dihydrofolate reductase HM988_RS01145 PF00303 Thymidylate synthase HM988_RS01150 PF07670 Nucleoside recognition HM988_RS01150 PF01773 Na+ dependent nucleoside transporter N-terminus HM988_RS01150 PF07662 Na+ dependent nucleoside transporter C-terminus HM988_RS01160 PF01012 Electron transfer flavoprotein domain HM988_RS01160 PF00766 Electron transfer flavoprotein FAD-binding domain HM988_RS01165 PF01012 Electron transfer flavoprotein domain HM988_RS01170 PF02780 Transketolase, C-terminal domain HM988_RS01170 PF00364 Biotin-requiring enzyme HM988_RS01170 PF02779 Transketolase, pyrimidine binding domain HM988_RS01195 PF00719 Inorganic pyrophosphatase HM988_RS01200 PF03030 Inorganic H+ pyrophosphatase HM988_RS01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS01235 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS01240 PF00072 Response regulator receiver domain HM988_RS01240 PF00486 Transcriptional regulatory protein, C terminal HM988_RS01250 PF01712 Deoxynucleoside kinase HM988_RS01255 PF13089 Polyphosphate kinase N-terminal domain HM988_RS01255 PF13090 Polyphosphate kinase C-terminal domain 2 HM988_RS01255 PF17941 Polyphosphate kinase C-terminal domain 1 HM988_RS01255 PF02503 Polyphosphate kinase middle domain HM988_RS01270 PF13194 Domain of unknown function (DUF4010) HM988_RS01280 PF12464 Maltose acetyltransferase HM988_RS01280 PF14602 Hexapeptide repeat of succinyl-transferase HM988_RS01285 PF00698 Acyl transferase domain HM988_RS01290 PF01252 Signal peptidase (SPase) II HM988_RS01300 PF01979 Amidohydrolase family HM988_RS01305 PF16363 GDP-mannose 4,6 dehydratase HM988_RS01310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HM988_RS01330 PF07687 Peptidase dimerisation domain HM988_RS01330 PF01546 Peptidase family M20/M25/M40 HM988_RS01335 PF03575 Peptidase family S51 HM988_RS01350 PF14322 Starch-binding associating with outer membrane HM988_RS01350 PF07980 SusD family HM988_RS01355 PF00593 TonB dependent receptor HM988_RS01355 PF07715 TonB-dependent Receptor Plug Domain HM988_RS01400 PF00356 Bacterial regulatory proteins, lacI family HM988_RS01435 PF00722 Glycosyl hydrolases family 16 HM988_RS01460 PF07980 SusD family HM988_RS01460 PF14322 Starch-binding associating with outer membrane HM988_RS01465 PF00593 TonB dependent receptor HM988_RS01465 PF07715 TonB-dependent Receptor Plug Domain HM988_RS01480 PF01494 FAD binding domain HM988_RS01505 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system HM988_RS01520 PF00535 Glycosyl transferase family 2 HM988_RS01530 PF07977 FabA-like domain HM988_RS01550 PF01522 Polysaccharide deacetylase HM988_RS01560 PF00109 Beta-ketoacyl synthase, N-terminal domain HM988_RS01560 PF02801 Beta-ketoacyl synthase, C-terminal domain HM988_RS01565 PF00550 Phosphopantetheine attachment site HM988_RS01595 PF00005 ABC transporter HM988_RS01610 PF07977 FabA-like domain HM988_RS01620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HM988_RS01620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HM988_RS01635 PF00550 Phosphopantetheine attachment site HM988_RS01640 PF02801 Beta-ketoacyl synthase, C-terminal domain HM988_RS01640 PF00109 Beta-ketoacyl synthase, N-terminal domain HM988_RS01655 PF00221 Aromatic amino acid lyase HM988_RS01665 PF13472 GDSL-like Lipase/Acylhydrolase family HM988_RS01665 PF07859 alpha/beta hydrolase fold HM988_RS01670 PF13472 GDSL-like Lipase/Acylhydrolase family HM988_RS01675 PF01095 Pectinesterase HM988_RS01680 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HM988_RS01680 PF04616 Glycosyl hydrolases family 43 HM988_RS01685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HM988_RS01685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HM988_RS01690 PF07470 Glycosyl Hydrolase Family 88 HM988_RS01710 PF00295 Glycosyl hydrolases family 28 HM988_RS01735 PF00593 TonB dependent receptor HM988_RS01735 PF07715 TonB-dependent Receptor Plug Domain HM988_RS01740 PF07980 SusD family HM988_RS01740 PF14322 Starch-binding associating with outer membrane HM988_RS01755 PF13229 Right handed beta helix region HM988_RS01760 PF00356 Bacterial regulatory proteins, lacI family HM988_RS01765 PF08666 SAF domain HM988_RS01765 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HM988_RS01770 PF08125 Mannitol dehydrogenase C-terminal domain HM988_RS01770 PF01232 Mannitol dehydrogenase Rossmann domain HM988_RS01775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HM988_RS01785 PF03480 Bacterial extracellular solute-binding protein, family 7 HM988_RS01790 PF02614 Glucuronate isomerase HM988_RS01800 PF04962 KduI/IolB family HM988_RS01815 PF05192 MutS domain III HM988_RS01815 PF01624 MutS domain I HM988_RS01815 PF05190 MutS family domain IV HM988_RS01815 PF00488 MutS domain V HM988_RS01815 PF05188 MutS domain II HM988_RS01820 PF00588 SpoU rRNA Methylase family HM988_RS01820 PF08032 RNA 2'-O ribose methyltransferase substrate binding HM988_RS01825 PF00398 Ribosomal RNA adenine dimethylase HM988_RS01830 PF01712 Deoxynucleoside kinase HM988_RS01845 PF04545 Sigma-70, region 4 HM988_RS01845 PF04539 Sigma-70 region 3 HM988_RS01845 PF03979 Sigma-70 factor, region 1.1 HM988_RS01845 PF04542 Sigma-70 region 2 HM988_RS01845 PF00140 Sigma-70 factor, region 1.2 HM988_RS01850 PF01165 Ribosomal protein S21 HM988_RS01855 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS01865 PF01177 Asp/Glu/Hydantoin racemase HM988_RS01885 PF01255 Putative undecaprenyl diphosphate synthase HM988_RS01895 PF01513 ATP-NAD kinase HM988_RS01905 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HM988_RS01910 PF00561 alpha/beta hydrolase fold HM988_RS01920 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HM988_RS01925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HM988_RS01925 PF05698 Bacterial trigger factor protein (TF) C-terminus HM988_RS01925 PF05697 Bacterial trigger factor protein (TF) HM988_RS01930 PF00574 Clp protease HM988_RS01935 PF06689 ClpX C4-type zinc finger HM988_RS01935 PF10431 C-terminal, D2-small domain, of ClpB protein HM988_RS01935 PF07724 AAA domain (Cdc48 subfamily) HM988_RS01960 PF02954 Bacterial regulatory protein, Fis family HM988_RS01960 PF00158 Sigma-54 interaction domain HM988_RS01960 PF00072 Response regulator receiver domain HM988_RS01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS01965 PF06580 Histidine kinase HM988_RS01990 PF01106 NifU-like domain HM988_RS02000 PF05552 Conserved TM helix HM988_RS02000 PF00924 Mechanosensitive ion channel HM988_RS02005 PF00814 Glycoprotease family HM988_RS02020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HM988_RS02025 PF00005 ABC transporter HM988_RS02025 PF02687 FtsX-like permease family HM988_RS02025 PF12704 MacB-like periplasmic core domain HM988_RS02030 PF00005 ABC transporter HM988_RS02030 PF12704 MacB-like periplasmic core domain HM988_RS02030 PF02687 FtsX-like permease family HM988_RS02035 PF00005 ABC transporter HM988_RS02045 PF04238 Protein of unknown function (DUF420) HM988_RS02050 PF02630 SCO1/SenC HM988_RS02065 PF00510 Cytochrome c oxidase subunit III HM988_RS02070 PF00510 Cytochrome c oxidase subunit III HM988_RS02075 PF01040 UbiA prenyltransferase family HM988_RS02120 PF01597 Glycine cleavage H-protein HM988_RS02130 PF07499 RuvA, C-terminal domain HM988_RS02130 PF01330 RuvA N terminal domain HM988_RS02135 PF03949 Malic enzyme, NAD binding domain HM988_RS02135 PF00390 Malic enzyme, N-terminal domain HM988_RS02135 PF01515 Phosphate acetyl/butaryl transferase HM988_RS02150 PF08331 Domain of unknown function (DUF1730) HM988_RS02180 PF07495 Y_Y_Y domain HM988_RS02180 PF00072 Response regulator receiver domain HM988_RS02180 PF07494 Two component regulator propeller HM988_RS02180 PF12833 Helix-turn-helix domain HM988_RS02180 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS02185 PF00067 Cytochrome P450 HM988_RS02190 PF05496 Holliday junction DNA helicase RuvB P-loop domain HM988_RS02190 PF17864 RuvB AAA lid domain HM988_RS02190 PF05491 RuvB C-terminal winged helix domain HM988_RS02195 PF00115 Cytochrome C and Quinol oxidase polypeptide I HM988_RS02200 PF06481 COX Aromatic Rich Motif HM988_RS02200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HM988_RS02225 PF00037 4Fe-4S binding domain HM988_RS02225 PF13247 4Fe-4S dicluster domain HM988_RS02245 PF04760 Translation initiation factor IF-2, N-terminal region HM988_RS02245 PF11987 Translation-initiation factor 2 HM988_RS02245 PF00009 Elongation factor Tu GTP binding domain HM988_RS02250 PF13184 NusA-like KH domain HM988_RS02250 PF08529 NusA N-terminal domain HM988_RS02250 PF00575 S1 RNA binding domain HM988_RS02255 PF02576 RimP N-terminal domain HM988_RS02275 PF01522 Polysaccharide deacetylase HM988_RS02280 PF00085 Thioredoxin HM988_RS02290 PF07730 Histidine kinase HM988_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS02295 PF00072 Response regulator receiver domain HM988_RS02295 PF04397 LytTr DNA-binding domain HM988_RS02320 PF00171 Aldehyde dehydrogenase family HM988_RS02330 PF02875 Mur ligase family, glutamate ligase domain HM988_RS02330 PF08245 Mur ligase middle domain HM988_RS02330 PF08443 RimK-like ATP-grasp domain HM988_RS02335 PF03575 Peptidase family S51 HM988_RS02340 PF01112 Asparaginase HM988_RS02345 PF07495 Y_Y_Y domain HM988_RS02345 PF00072 Response regulator receiver domain HM988_RS02345 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS02345 PF07494 Two component regulator propeller HM988_RS02345 PF12833 Helix-turn-helix domain HM988_RS02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS02365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HM988_RS02365 PF01612 3'-5' exonuclease HM988_RS02365 PF01367 5'-3' exonuclease, C-terminal SAM fold HM988_RS02365 PF00476 DNA polymerase family A HM988_RS02405 PF13593 SBF-like CPA transporter family (DUF4137) HM988_RS02410 PF01464 Transglycosylase SLT domain HM988_RS02410 PF00497 Bacterial extracellular solute-binding proteins, family 3 HM988_RS02425 PF04055 Radical SAM superfamily HM988_RS02425 PF08497 Radical SAM N-terminal HM988_RS02425 PF11842 Domain of unknown function (DUF3362) HM988_RS02430 PF12848 ABC transporter HM988_RS02430 PF16326 ABC transporter C-terminal domain HM988_RS02430 PF00005 ABC transporter HM988_RS02455 PF03481 Putative GTP-binding controlling metal-binding HM988_RS02455 PF01300 Telomere recombination HM988_RS02460 PF00582 Universal stress protein family HM988_RS02465 PF00572 Ribosomal protein L13 HM988_RS02470 PF00380 Ribosomal protein S9/S16 HM988_RS02475 PF00318 Ribosomal protein S2 HM988_RS02480 PF00889 Elongation factor TS HM988_RS02485 PF00696 Amino acid kinase family HM988_RS02490 PF01765 Ribosome recycling factor HM988_RS02505 PF01336 OB-fold nucleic acid binding domain HM988_RS02505 PF00152 tRNA synthetases class II (D, K and N) HM988_RS02510 PF00309 Sigma-54 factor, Activator interacting domain (AID) HM988_RS02510 PF04963 Sigma-54 factor, core binding domain HM988_RS02510 PF04552 Sigma-54, DNA binding domain HM988_RS02530 PF02472 Biopolymer transport protein ExbD/TolR HM988_RS02540 PF01618 MotA/TolQ/ExbB proton channel family HM988_RS02550 PF00710 Asparaginase, N-terminal HM988_RS02550 PF17763 Glutaminase/Asparaginase C-terminal domain HM988_RS02555 PF01026 TatD related DNase HM988_RS02565 PF00072 Response regulator receiver domain HM988_RS02565 PF00196 Bacterial regulatory proteins, luxR family HM988_RS02570 PF00364 Biotin-requiring enzyme HM988_RS02570 PF02817 e3 binding domain HM988_RS02570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HM988_RS02575 PF02779 Transketolase, pyrimidine binding domain HM988_RS02575 PF00676 Dehydrogenase E1 component HM988_RS02575 PF16870 2-oxoglutarate dehydrogenase C-terminal HM988_RS02575 PF16078 2-oxoglutarate dehydrogenase N-terminus HM988_RS02590 PF00348 Polyprenyl synthetase HM988_RS02595 PF00440 Bacterial regulatory proteins, tetR family HM988_RS02605 PF00529 HlyD membrane-fusion protein of T1SS HM988_RS02605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HM988_RS02610 PF00873 AcrB/AcrD/AcrF family HM988_RS02615 PF01336 OB-fold nucleic acid binding domain HM988_RS02615 PF00152 tRNA synthetases class II (D, K and N) HM988_RS02615 PF02938 GAD domain HM988_RS02630 PF00313 'Cold-shock' DNA-binding domain HM988_RS02640 PF14437 MafB19-like deaminase HM988_RS02650 PF02779 Transketolase, pyrimidine binding domain HM988_RS02650 PF02780 Transketolase, C-terminal domain HM988_RS02650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HM988_RS02660 PF13286 Phosphohydrolase-associated domain HM988_RS02660 PF01966 HD domain HM988_RS02665 PF00593 TonB dependent receptor HM988_RS02665 PF07715 TonB-dependent Receptor Plug Domain HM988_RS02710 PF00317 Ribonucleotide reductase, all-alpha domain HM988_RS02710 PF02867 Ribonucleotide reductase, barrel domain HM988_RS02710 PF03477 ATP cone domain HM988_RS02715 PF13597 Anaerobic ribonucleoside-triphosphate reductase HM988_RS02715 PF03477 ATP cone domain HM988_RS02720 PF00072 Response regulator receiver domain HM988_RS02720 PF04397 LytTr DNA-binding domain HM988_RS02725 PF06580 Histidine kinase HM988_RS02725 PF07694 5TMR of 5TMR-LYT HM988_RS02745 PF01914 MarC family integral membrane protein HM988_RS02795 PF03572 Peptidase family S41 HM988_RS02795 PF13180 PDZ domain HM988_RS02810 PF01053 Cys/Met metabolism PLP-dependent enzyme HM988_RS02815 PF02574 Homocysteine S-methyltransferase HM988_RS02815 PF00809 Pterin binding enzyme HM988_RS02825 PF02574 Homocysteine S-methyltransferase HM988_RS02825 PF00809 Pterin binding enzyme HM988_RS02825 PF02965 Vitamin B12 dependent methionine synthase, activation domain HM988_RS02825 PF02607 B12 binding domain HM988_RS02825 PF02310 B12 binding domain HM988_RS02830 PF02219 Methylenetetrahydrofolate reductase HM988_RS02835 PF03781 Sulfatase-modifying factor enzyme 1 HM988_RS02840 PF06463 Molybdenum Cofactor Synthesis C HM988_RS02840 PF04055 Radical SAM superfamily HM988_RS02845 PF01967 MoaC family HM988_RS02850 PF02391 MoaE protein HM988_RS02855 PF00899 ThiF family HM988_RS02855 PF00581 Rhodanese-like domain HM988_RS02865 PF10414 Sirohaem synthase dimerisation region HM988_RS02865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HM988_RS02865 PF14824 Sirohaem biosynthesis protein central HM988_RS02870 PF12804 MobA-like NTP transferase domain HM988_RS02875 PF01925 Sulfite exporter TauE/SafE HM988_RS02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HM988_RS02880 PF03459 TOBE domain HM988_RS02885 PF03453 MoeA N-terminal region (domain I and II) HM988_RS02885 PF00994 Probable molybdopterin binding domain HM988_RS02885 PF03454 MoeA C-terminal region (domain IV) HM988_RS02900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HM988_RS02900 PF14572 Phosphoribosyl synthetase-associated domain HM988_RS02905 PF14693 Ribosomal protein TL5, C-terminal domain HM988_RS02905 PF01386 Ribosomal L25p family HM988_RS02910 PF01195 Peptidyl-tRNA hydrolase HM988_RS02920 PF06574 FAD synthetase HM988_RS02920 PF01687 Riboflavin kinase HM988_RS02930 PF02403 Seryl-tRNA synthetase N-terminal domain HM988_RS02930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HM988_RS02950 PF00398 Ribosomal RNA adenine dimethylase HM988_RS02955 PF00571 CBS domain HM988_RS02955 PF01769 Divalent cation transporter HM988_RS02955 PF03448 MgtE intracellular N domain HM988_RS02965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HM988_RS02965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HM988_RS02970 PF01593 Flavin containing amine oxidoreductase HM988_RS02975 PF00196 Bacterial regulatory proteins, luxR family HM988_RS02975 PF00072 Response regulator receiver domain HM988_RS03010 PF00696 Amino acid kinase family HM988_RS03010 PF01842 ACT domain HM988_RS03020 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HM988_RS03030 PF17757 UvrB interaction domain HM988_RS03030 PF03461 TRCF domain HM988_RS03030 PF00271 Helicase conserved C-terminal domain HM988_RS03030 PF00270 DEAD/DEAH box helicase HM988_RS03030 PF02559 CarD-like/TRCF domain HM988_RS03045 PF01476 LysM domain HM988_RS03045 PF04972 BON domain HM988_RS03055 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HM988_RS03055 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HM988_RS03065 PF00440 Bacterial regulatory proteins, tetR family HM988_RS03075 PF02321 Outer membrane efflux protein HM988_RS03080 PF00873 AcrB/AcrD/AcrF family HM988_RS03085 PF00529 HlyD membrane-fusion protein of T1SS HM988_RS03085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HM988_RS03095 PF01409 tRNA synthetases class II core domain (F) HM988_RS03095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HM988_RS03120 PF00484 Carbonic anhydrase HM988_RS03125 PF00916 Sulfate permease family HM988_RS03125 PF01740 STAS domain HM988_RS03135 PF00484 Carbonic anhydrase HM988_RS03145 PF00916 Sulfate permease family HM988_RS03145 PF01740 STAS domain HM988_RS03170 PF13519 von Willebrand factor type A domain HM988_RS03175 PF13519 von Willebrand factor type A domain HM988_RS03185 PF01882 Protein of unknown function DUF58 HM988_RS03190 PF07726 ATPase family associated with various cellular activities (AAA) HM988_RS03190 PF17863 AAA lid domain HM988_RS03200 PF00248 Aldo/keto reductase family HM988_RS03235 PF00171 Aldehyde dehydrogenase family HM988_RS03255 PF03992 Antibiotic biosynthesis monooxygenase HM988_RS03265 PF06832 Penicillin-Binding Protein C-terminus Family HM988_RS03265 PF00905 Penicillin binding protein transpeptidase domain HM988_RS03265 PF00912 Transglycosylase HM988_RS03305 PF00403 Heavy-metal-associated domain HM988_RS03310 PF00892 EamA-like transporter family HM988_RS03315 PF00675 Insulinase (Peptidase family M16) HM988_RS03315 PF05193 Peptidase M16 inactive domain HM988_RS03320 PF00675 Insulinase (Peptidase family M16) HM988_RS03320 PF05193 Peptidase M16 inactive domain HM988_RS03325 PF00829 Ribosomal prokaryotic L21 protein HM988_RS03330 PF01016 Ribosomal L27 protein HM988_RS03340 PF01624 MutS domain I HM988_RS03340 PF05190 MutS family domain IV HM988_RS03340 PF05192 MutS domain III HM988_RS03340 PF05188 MutS domain II HM988_RS03340 PF00488 MutS domain V HM988_RS03345 PF13085 2Fe-2S iron-sulfur cluster binding domain HM988_RS03355 PF02910 Fumarate reductase flavoprotein C-term HM988_RS03355 PF00890 FAD binding domain HM988_RS03375 PF00557 Metallopeptidase family M24 HM988_RS03375 PF01321 Creatinase/Prolidase N-terminal domain HM988_RS03380 PF00293 NUDIX domain HM988_RS03385 PF00271 Helicase conserved C-terminal domain HM988_RS03385 PF04851 Type III restriction enzyme, res subunit HM988_RS03390 PF01842 ACT domain HM988_RS03390 PF00696 Amino acid kinase family HM988_RS03400 PF00364 Biotin-requiring enzyme HM988_RS03400 PF00561 alpha/beta hydrolase fold HM988_RS03415 PF02769 AIR synthase related protein, C-terminal domain HM988_RS03415 PF00586 AIR synthase related protein, N-terminal domain HM988_RS03425 PF01521 Iron-sulphur cluster biosynthesis HM988_RS03430 PF01458 Uncharacterized protein family (UPF0051) HM988_RS03435 PF00753 Metallo-beta-lactamase superfamily HM988_RS03445 PF00005 ABC transporter HM988_RS03450 PF01458 Uncharacterized protein family (UPF0051) HM988_RS03455 PF00144 Beta-lactamase HM988_RS03475 PF00266 Aminotransferase class-V HM988_RS03485 PF02657 Fe-S metabolism associated domain HM988_RS03490 PF01883 Iron-sulfur cluster assembly protein HM988_RS03505 PF00005 ABC transporter HM988_RS03520 PF17092 Penicillin-binding protein OB-like domain HM988_RS03520 PF00912 Transglycosylase HM988_RS03520 PF00905 Penicillin binding protein transpeptidase domain HM988_RS03525 PF01926 50S ribosome-binding GTPase HM988_RS03525 PF16360 GTP-binding GTPase Middle Region HM988_RS03525 PF13167 GTP-binding GTPase N-terminal HM988_RS03545 PF01389 OmpA-like transmembrane domain HM988_RS03545 PF00691 OmpA family HM988_RS03550 PF01928 CYTH domain HM988_RS03555 PF00817 impB/mucB/samB family HM988_RS03555 PF11799 impB/mucB/samB family C-terminal domain HM988_RS03565 PF00391 PEP-utilising enzyme, mobile domain HM988_RS03565 PF02887 Pyruvate kinase, alpha/beta domain HM988_RS03565 PF00224 Pyruvate kinase, barrel domain HM988_RS03575 PF14622 Ribonuclease-III-like HM988_RS03575 PF00035 Double-stranded RNA binding motif HM988_RS03580 PF02801 Beta-ketoacyl synthase, C-terminal domain HM988_RS03580 PF00109 Beta-ketoacyl synthase, N-terminal domain HM988_RS03585 PF00550 Phosphopantetheine attachment site HM988_RS03595 PF01693 Caulimovirus viroplasmin HM988_RS03610 PF02463 RecF/RecN/SMC N terminal domain HM988_RS03620 PF00156 Phosphoribosyl transferase domain HM988_RS03625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HM988_RS03625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HM988_RS03630 PF12705 PD-(D/E)XK nuclease superfamily HM988_RS03630 PF00580 UvrD/REP helicase N-terminal domain HM988_RS03630 PF13361 UvrD-like helicase C-terminal domain HM988_RS03635 PF00155 Aminotransferase class I and II HM988_RS03640 PF00691 OmpA family HM988_RS03640 PF01389 OmpA-like transmembrane domain HM988_RS03645 PF12705 PD-(D/E)XK nuclease superfamily HM988_RS03655 PF09308 LuxQ, periplasmic HM988_RS03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS03655 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS03655 PF00072 Response regulator receiver domain HM988_RS03690 PF01242 6-pyruvoyl tetrahydropterin synthase HM988_RS03695 PF00149 Calcineurin-like phosphoesterase HM988_RS03715 PF05736 OprF membrane domain HM988_RS03715 PF00691 OmpA family HM988_RS03720 PF01368 DHH family HM988_RS03720 PF17768 RecJ OB domain HM988_RS03720 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HM988_RS03720 PF02272 DHHA1 domain HM988_RS03755 PF00593 TonB dependent receptor HM988_RS03755 PF07715 TonB-dependent Receptor Plug Domain HM988_RS03755 PF07715 TonB-dependent Receptor Plug Domain HM988_RS03755 PF00593 TonB dependent receptor HM988_RS03760 PF00593 TonB dependent receptor HM988_RS03760 PF07715 TonB-dependent Receptor Plug Domain HM988_RS03765 PF03167 Uracil DNA glycosylase superfamily HM988_RS03775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HM988_RS03780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HM988_RS03800 PF00265 Thymidine kinase HM988_RS03805 PF00842 Alanine racemase, C-terminal domain HM988_RS03805 PF01168 Alanine racemase, N-terminal domain HM988_RS03810 PF01741 Large-conductance mechanosensitive channel, MscL HM988_RS03815 PF01118 Semialdehyde dehydrogenase, NAD binding domain HM988_RS03815 PF02774 Semialdehyde dehydrogenase, dimerisation domain HM988_RS03820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HM988_RS03820 PF00326 Prolyl oligopeptidase family HM988_RS03840 PF00005 ABC transporter HM988_RS03885 PF00550 Phosphopantetheine attachment site HM988_RS03890 PF02801 Beta-ketoacyl synthase, C-terminal domain HM988_RS03890 PF00109 Beta-ketoacyl synthase, N-terminal domain HM988_RS03895 PF01541 GIY-YIG catalytic domain HM988_RS03900 PF07977 FabA-like domain HM988_RS03905 PF00195 Chalcone and stilbene synthases, N-terminal domain HM988_RS03905 PF02797 Chalcone and stilbene synthases, C-terminal domain HM988_RS03915 PF01593 Flavin containing amine oxidoreductase HM988_RS03930 PF00912 Transglycosylase HM988_RS03935 PF01266 FAD dependent oxidoreductase HM988_RS03935 PF05690 Thiazole biosynthesis protein ThiG HM988_RS03940 PF02868 Thermolysin metallopeptidase, alpha-helical domain HM988_RS03940 PF07504 Fungalysin/Thermolysin Propeptide Motif HM988_RS03940 PF01447 Thermolysin metallopeptidase, catalytic domain HM988_RS03940 PF01483 Proprotein convertase P-domain HM988_RS03945 PF00289 Biotin carboxylase, N-terminal domain HM988_RS03945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HM988_RS03945 PF02785 Biotin carboxylase C-terminal domain HM988_RS03950 PF00364 Biotin-requiring enzyme HM988_RS03955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HM988_RS03955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HM988_RS03960 PF01783 Ribosomal L32p protein family HM988_RS03970 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HM988_RS03975 PF00677 Lumazine binding domain HM988_RS03995 PF13807 G-rich domain on putative tyrosine kinase HM988_RS03995 PF02706 Chain length determinant protein HM988_RS03995 PF13614 AAA domain HM988_RS04005 PF00535 Glycosyl transferase family 2 HM988_RS04025 PF00535 Glycosyl transferase family 2 HM988_RS04045 PF03102 NeuB family HM988_RS04045 PF08666 SAF domain HM988_RS04075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HM988_RS04080 PF02719 Polysaccharide biosynthesis protein HM988_RS04085 PF00953 Glycosyl transferase family 4 HM988_RS04135 PF02033 Ribosome-binding factor A HM988_RS04140 PF12704 MacB-like periplasmic core domain HM988_RS04140 PF02687 FtsX-like permease family HM988_RS04145 PF01207 Dihydrouridine synthase (Dus) HM988_RS04160 PF04389 Peptidase family M28 HM988_RS04175 PF03144 Elongation factor Tu domain 2 HM988_RS04175 PF00679 Elongation factor G C-terminus HM988_RS04175 PF00009 Elongation factor Tu GTP binding domain HM988_RS04175 PF06421 GTP-binding protein LepA C-terminus HM988_RS04180 PF02080 TrkA-C domain HM988_RS04180 PF03471 Transporter associated domain HM988_RS04180 PF00999 Sodium/hydrogen exchanger family HM988_RS04190 PF00753 Metallo-beta-lactamase superfamily HM988_RS04195 PF00082 Subtilase family HM988_RS04200 PF01433 Peptidase family M1 domain HM988_RS04200 PF11838 ERAP1-like C-terminal domain HM988_RS04210 PF00825 Ribonuclease P HM988_RS04215 PF13180 PDZ domain HM988_RS04215 PF03572 Peptidase family S41 HM988_RS04225 PF13673 Acetyltransferase (GNAT) domain HM988_RS04230 PF01545 Cation efflux family HM988_RS04230 PF16916 Dimerisation domain of Zinc Transporter HM988_RS04235 PF02502 Ribose/Galactose Isomerase HM988_RS04245 PF08206 Ribonuclease B OB domain HM988_RS04245 PF00773 RNB domain HM988_RS04245 PF00575 S1 RNA binding domain HM988_RS04245 PF17876 Cold shock domain HM988_RS04250 PF01906 Putative heavy-metal-binding HM988_RS04285 PF00749 tRNA synthetases class I (E and Q), catalytic domain HM988_RS04285 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HM988_RS04315 PF00749 tRNA synthetases class I (E and Q), catalytic domain HM988_RS04325 PF02130 Uncharacterized protein family UPF0054 HM988_RS04330 PF01134 Glucose inhibited division protein A HM988_RS04330 PF13932 GidA associated domain HM988_RS04350 PF09115 DNA polymerase III, delta subunit, C terminal HM988_RS04355 PF00162 Phosphoglycerate kinase HM988_RS04360 PF00877 NlpC/P60 family HM988_RS04360 PF01476 LysM domain HM988_RS04370 PF02416 mttA/Hcf106 family HM988_RS04395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HM988_RS04400 PF04321 RmlD substrate binding domain HM988_RS04405 PF02350 UDP-N-acetylglucosamine 2-epimerase HM988_RS04410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HM988_RS04410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HM988_RS04410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HM988_RS04420 PF00483 Nucleotidyl transferase HM988_RS04425 PF16363 GDP-mannose 4,6 dehydratase HM988_RS04430 PF01370 NAD dependent epimerase/dehydratase family HM988_RS04435 PF13439 Glycosyltransferase Family 4 HM988_RS04435 PF00534 Glycosyl transferases group 1 HM988_RS04440 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS04470 PF02911 Formyl transferase, C-terminal domain HM988_RS04470 PF00551 Formyl transferase HM988_RS04480 PF03808 Glycosyl transferase WecB/TagA/CpsF family HM988_RS04485 PF02397 Bacterial sugar transferase HM988_RS04490 PF00534 Glycosyl transferases group 1 HM988_RS04500 PF00535 Glycosyl transferase family 2 HM988_RS04505 PF02844 Phosphoribosylglycinamide synthetase, N domain HM988_RS04505 PF02843 Phosphoribosylglycinamide synthetase, C domain HM988_RS04505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HM988_RS04530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HM988_RS04535 PF00111 2Fe-2S iron-sulfur cluster binding domain HM988_RS04560 PF00005 ABC transporter HM988_RS04580 PF00119 ATP synthase A chain HM988_RS04585 PF00137 ATP synthase subunit C HM988_RS04590 PF00430 ATP synthase B/B' CF(0) HM988_RS04595 PF00213 ATP synthase delta (OSCP) subunit HM988_RS04600 PF00306 ATP synthase alpha/beta chain, C terminal domain HM988_RS04600 PF02874 ATP synthase alpha/beta family, beta-barrel domain HM988_RS04600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HM988_RS04610 PF00231 ATP synthase HM988_RS04635 PF00692 dUTPase HM988_RS04640 PF00483 Nucleotidyl transferase HM988_RS04640 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS04660 PF08460 Bacterial SH3 domain HM988_RS04660 PF01551 Peptidase family M23 HM988_RS04665 PF03061 Thioesterase superfamily HM988_RS04675 PF02481 DNA recombination-mediator protein A HM988_RS04675 PF17782 DprA winged helix domain HM988_RS04680 PF00579 tRNA synthetases class I (W and Y) HM988_RS04705 PF00154 recA bacterial DNA recombination protein HM988_RS04710 PF12368 Rhodanase C-terminal HM988_RS04710 PF17773 UPF0176 acylphosphatase like domain HM988_RS04710 PF00581 Rhodanese-like domain HM988_RS04715 PF01464 Transglycosylase SLT domain HM988_RS04715 PF10145 Phage-related minor tail protein HM988_RS04715 PF01551 Peptidase family M23 HM988_RS04720 PF04468 PSP1 C-terminal conserved region HM988_RS04725 PF14109 GldH lipoprotein HM988_RS04730 PF00905 Penicillin binding protein transpeptidase domain HM988_RS04730 PF00912 Transglycosylase HM988_RS04735 PF01144 Coenzyme A transferase HM988_RS04740 PF01144 Coenzyme A transferase HM988_RS04745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HM988_RS04745 PF00005 ABC transporter HM988_RS04760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HM988_RS04760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HM988_RS04765 PF01595 Cyclin M transmembrane N-terminal domain HM988_RS04765 PF00571 CBS domain HM988_RS04770 PF01037 Lrp/AsnC ligand binding domain HM988_RS04775 PF00490 Delta-aminolevulinic acid dehydratase HM988_RS04785 PF01218 Coproporphyrinogen III oxidase HM988_RS04800 PF02386 Cation transport protein HM988_RS04805 PF01208 Uroporphyrinogen decarboxylase (URO-D) HM988_RS04815 PF03900 Porphobilinogen deaminase, C-terminal domain HM988_RS04815 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HM988_RS04820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HM988_RS04820 PF01488 Shikimate / quinate 5-dehydrogenase HM988_RS04820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HM988_RS04845 PF00762 Ferrochelatase HM988_RS04855 PF03653 Uncharacterised protein family (UPF0093) HM988_RS04860 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS04860 PF00672 HAMP domain HM988_RS04865 PF00378 Enoyl-CoA hydratase/isomerase HM988_RS04870 PF12728 Helix-turn-helix domain HM988_RS04870 PF02661 Fic/DOC family HM988_RS04890 PF02311 AraC-like ligand binding domain HM988_RS04890 PF12833 Helix-turn-helix domain HM988_RS04900 PF01966 HD domain HM988_RS04915 PF06491 Disulphide isomerase HM988_RS04925 PF00226 DnaJ domain HM988_RS04925 PF01556 DnaJ C terminal domain HM988_RS04925 PF00684 DnaJ central domain HM988_RS04940 PF00950 ABC 3 transport family HM988_RS04945 PF00950 ABC 3 transport family HM988_RS04960 PF00005 ABC transporter HM988_RS04965 PF01297 Zinc-uptake complex component A periplasmic HM988_RS04975 PF18357 Diphteria toxin repressor SH3 domain HM988_RS04975 PF02742 Iron dependent repressor, metal binding and dimerisation domain HM988_RS04975 PF01325 Iron dependent repressor, N-terminal DNA binding domain HM988_RS04985 PF07664 Ferrous iron transport protein B C terminus HM988_RS04985 PF07670 Nucleoside recognition HM988_RS04985 PF02421 Ferrous iron transport protein B HM988_RS04995 PF02630 SCO1/SenC HM988_RS05000 PF01433 Peptidase family M1 domain HM988_RS05000 PF11838 ERAP1-like C-terminal domain HM988_RS05005 PF17820 PDZ domain HM988_RS05005 PF02163 Peptidase family M50 HM988_RS05060 PF00271 Helicase conserved C-terminal domain HM988_RS05075 PF04002 RadC-like JAB domain HM988_RS05130 PF14437 MafB19-like deaminase HM988_RS05135 PF16655 PhoD-like phosphatase, N-terminal domain HM988_RS05135 PF09423 PhoD-like phosphatase HM988_RS05145 PF01370 NAD dependent epimerase/dehydratase family HM988_RS05165 PF00478 IMP dehydrogenase / GMP reductase domain HM988_RS05165 PF00571 CBS domain HM988_RS05175 PF00436 Single-strand binding protein family HM988_RS05235 PF00578 AhpC/TSA family HM988_RS05240 PF00144 Beta-lactamase HM988_RS05250 PF01546 Peptidase family M20/M25/M40 HM988_RS05250 PF07687 Peptidase dimerisation domain HM988_RS05260 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HM988_RS05260 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HM988_RS05265 PF00941 FAD binding domain in molybdopterin dehydrogenase HM988_RS05265 PF03450 CO dehydrogenase flavoprotein C-terminal domain HM988_RS05270 PF00111 2Fe-2S iron-sulfur cluster binding domain HM988_RS05270 PF01799 [2Fe-2S] binding domain HM988_RS05350 PF00210 Ferritin-like domain HM988_RS05390 PF08281 Sigma-70, region 4 HM988_RS05390 PF04542 Sigma-70 region 2 HM988_RS05395 PF04773 FecR protein HM988_RS05395 PF16220 Domain of unknown function (DUF4880) HM988_RS05405 PF00850 Histone deacetylase domain HM988_RS05415 PF17674 HHH domain HM988_RS05415 PF00575 S1 RNA binding domain HM988_RS05415 PF16921 Tex protein YqgF-like domain HM988_RS05415 PF09371 Tex-like protein N-terminal domain HM988_RS05420 PF00691 OmpA family HM988_RS05440 PF08264 Anticodon-binding domain of tRNA HM988_RS05440 PF09334 tRNA synthetases class I (M) HM988_RS05440 PF01588 Putative tRNA binding domain HM988_RS05445 PF17676 LD-carboxypeptidase C-terminal domain HM988_RS05445 PF02016 LD-carboxypeptidase N-terminal domain HM988_RS05455 PF02021 Uncharacterised protein family UPF0102 HM988_RS05465 PF01467 Cytidylyltransferase-like HM988_RS05470 PF00625 Guanylate kinase HM988_RS05475 PF08340 Domain of unknown function (DUF1732) HM988_RS05475 PF03755 YicC-like family, N-terminal region HM988_RS05490 PF00892 EamA-like transporter family HM988_RS05505 PF00999 Sodium/hydrogen exchanger family HM988_RS05515 PF01053 Cys/Met metabolism PLP-dependent enzyme HM988_RS05525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HM988_RS05525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HM988_RS05535 PF02565 Recombination protein O C terminal HM988_RS05535 PF11967 Recombination protein O N terminal HM988_RS05540 PF00593 TonB dependent receptor HM988_RS05540 PF07715 TonB-dependent Receptor Plug Domain HM988_RS05550 PF02631 RecX family HM988_RS05570 PF01145 SPFH domain / Band 7 family HM988_RS05570 PF15975 Flotillin HM988_RS05595 PF13443 Cro/C1-type HTH DNA-binding domain HM988_RS05605 PF11799 impB/mucB/samB family C-terminal domain HM988_RS05605 PF00817 impB/mucB/samB family HM988_RS05605 PF11798 IMS family HHH motif HM988_RS05610 PF07733 Bacterial DNA polymerase III alpha NTPase domain HM988_RS05610 PF02811 PHP domain HM988_RS05610 PF14579 Helix-hairpin-helix motif HM988_RS05610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HM988_RS05610 PF01336 OB-fold nucleic acid binding domain HM988_RS05620 PF01734 Patatin-like phospholipase HM988_RS05625 PF08459 UvrC Helix-hairpin-helix N-terminal HM988_RS05625 PF02151 UvrB/uvrC motif HM988_RS05625 PF01541 GIY-YIG catalytic domain HM988_RS05630 PF08443 RimK-like ATP-grasp domain HM988_RS05630 PF18030 RimK PreATP-grasp domain HM988_RS05635 PF08443 RimK-like ATP-grasp domain HM988_RS05635 PF18030 RimK PreATP-grasp domain HM988_RS05645 PF01812 5-formyltetrahydrofolate cyclo-ligase family HM988_RS05650 PF01252 Signal peptidase (SPase) II HM988_RS05660 PF00795 Carbon-nitrogen hydrolase HM988_RS05685 PF00133 tRNA synthetases class I (I, L, M and V) HM988_RS05685 PF08264 Anticodon-binding domain of tRNA HM988_RS05695 PF18073 Rubredoxin metal binding domain HM988_RS05720 PF02261 Aspartate decarboxylase HM988_RS05725 PF02569 Pantoate-beta-alanine ligase HM988_RS05730 PF08323 Starch synthase catalytic domain HM988_RS05730 PF00534 Glycosyl transferases group 1 HM988_RS05740 PF01380 SIS domain HM988_RS05745 PF07715 TonB-dependent Receptor Plug Domain HM988_RS05745 PF00593 TonB dependent receptor HM988_RS05755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HM988_RS05755 PF02874 ATP synthase alpha/beta family, beta-barrel domain HM988_RS05760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HM988_RS05770 PF04209 homogentisate 1,2-dioxygenase HM988_RS05780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HM988_RS05790 PF03301 Tryptophan 2,3-dioxygenase HM988_RS05800 PF00342 Phosphoglucose isomerase HM988_RS05805 PF07715 TonB-dependent Receptor Plug Domain HM988_RS05805 PF00593 TonB dependent receptor HM988_RS05820 PF00571 CBS domain HM988_RS05820 PF03471 Transporter associated domain HM988_RS05825 PF00436 Single-strand binding protein family HM988_RS05830 PF14815 NUDIX domain HM988_RS05830 PF00730 HhH-GPD superfamily base excision DNA repair protein HM988_RS05835 PF00216 Bacterial DNA-binding protein HM988_RS05840 PF10150 Ribonuclease E/G family HM988_RS05840 PF00575 S1 RNA binding domain HM988_RS05860 PF05221 S-adenosyl-L-homocysteine hydrolase HM988_RS05860 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HM988_RS05870 PF01884 PcrB family HM988_RS05910 PF01272 Transcription elongation factor, GreA/GreB, C-term HM988_RS05910 PF03449 Transcription elongation factor, N-terminal HM988_RS05915 PF01230 HIT domain HM988_RS05925 PF01541 GIY-YIG catalytic domain HM988_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS05930 PF00989 PAS fold HM988_RS05930 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS05935 PF01613 Flavin reductase like domain HM988_RS05945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HM988_RS05950 PF13673 Acetyltransferase (GNAT) domain HM988_RS05950 PF13302 Acetyltransferase (GNAT) domain HM988_RS05950 PF00958 GMP synthase C terminal domain HM988_RS05950 PF00117 Glutamine amidotransferase class-I HM988_RS05950 PF03352 Methyladenine glycosylase HM988_RS05965 PF01509 TruB family pseudouridylate synthase (N terminal domain) HM988_RS05970 PF02673 Bacitracin resistance protein BacA HM988_RS05980 PF18075 FtsX extracellular domain HM988_RS05985 PF13603 Leucyl-tRNA synthetase, Domain 2 HM988_RS05985 PF08264 Anticodon-binding domain of tRNA HM988_RS05985 PF09334 tRNA synthetases class I (M) HM988_RS05995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HM988_RS05995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HM988_RS06005 PF01027 Inhibitor of apoptosis-promoting Bax1 HM988_RS06010 PF03852 DNA mismatch endonuclease Vsr HM988_RS06010 PF04480 Protein of unknown function (DUF559) HM988_RS06015 PF10459 Peptidase S46 HM988_RS06020 PF00155 Aminotransferase class I and II HM988_RS06035 PF00795 Carbon-nitrogen hydrolase HM988_RS06045 PF00156 Phosphoribosyl transferase domain HM988_RS06055 PF03129 Anticodon binding domain HM988_RS06080 PF03372 Endonuclease/Exonuclease/phosphatase family HM988_RS06085 PF00691 OmpA family HM988_RS06085 PF13677 Membrane MotB of proton-channel complex MotA/MotB HM988_RS06090 PF00248 Aldo/keto reductase family HM988_RS06100 PF13404 AsnC-type helix-turn-helix domain HM988_RS06100 PF01037 Lrp/AsnC ligand binding domain HM988_RS06115 PF04241 Protein of unknown function (DUF423) HM988_RS06120 PF01293 Phosphoenolpyruvate carboxykinase HM988_RS06135 PF00535 Glycosyl transferase family 2 HM988_RS06140 PF01979 Amidohydrolase family HM988_RS06150 PF16363 GDP-mannose 4,6 dehydratase HM988_RS06155 PF00579 tRNA synthetases class I (W and Y) HM988_RS06180 PF00072 Response regulator receiver domain HM988_RS06180 PF00486 Transcriptional regulatory protein, C terminal HM988_RS06185 PF16736 Single Cache-like HM988_RS06185 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS06185 PF00989 PAS fold HM988_RS06190 PF04101 Glycosyltransferase family 28 C-terminal domain HM988_RS06190 PF03033 Glycosyltransferase family 28 N-terminal domain HM988_RS06195 PF02390 Putative methyltransferase HM988_RS06205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HM988_RS06210 PF10609 NUBPL iron-transfer P-loop NTPase HM988_RS06215 PF01106 NifU-like domain HM988_RS06220 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS06225 PF00111 2Fe-2S iron-sulfur cluster binding domain HM988_RS06240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HM988_RS06240 PF02770 Acyl-CoA dehydrogenase, middle domain HM988_RS06240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HM988_RS06245 PF01594 AI-2E family transporter HM988_RS06250 PF05175 Methyltransferase small domain HM988_RS06255 PF05239 PRC-barrel domain HM988_RS06255 PF01782 RimM N-terminal domain HM988_RS06260 PF00886 Ribosomal protein S16 HM988_RS06275 PF14579 Helix-hairpin-helix motif HM988_RS06275 PF02811 PHP domain HM988_RS06275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HM988_RS06275 PF07733 Bacterial DNA polymerase III alpha NTPase domain HM988_RS06275 PF01336 OB-fold nucleic acid binding domain HM988_RS06300 PF00085 Thioredoxin HM988_RS06315 PF02899 Phage integrase, N-terminal SAM-like domain HM988_RS06315 PF00589 Phage integrase family HM988_RS06335 PF00873 AcrB/AcrD/AcrF family HM988_RS06340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HM988_RS06340 PF00529 HlyD membrane-fusion protein of T1SS HM988_RS06345 PF00543 Nitrogen regulatory protein P-II HM988_RS06380 PF01062 Bestrophin, RFP-TM, chloride channel HM988_RS06385 PF00403 Heavy-metal-associated domain HM988_RS06395 PF13520 Amino acid permease HM988_RS06420 PF00403 Heavy-metal-associated domain HM988_RS06450 PF02411 MerT mercuric transport protein HM988_RS06455 PF01022 Bacterial regulatory protein, arsR family HM988_RS06460 PF01520 N-acetylmuramoyl-L-alanine amidase HM988_RS06510 PF17191 RecG wedge domain HM988_RS06510 PF00270 DEAD/DEAH box helicase HM988_RS06510 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HM988_RS06530 PF01555 DNA methylase HM988_RS06560 PF00436 Single-strand binding protein family HM988_RS06585 PF02195 ParB-like nuclease domain HM988_RS06585 PF17762 HTH domain found in ParB protein HM988_RS06590 PF05231 MASE1 HM988_RS06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS06590 PF07730 Histidine kinase HM988_RS06600 PF04306 Protein of unknown function (DUF456) HM988_RS06625 PF00535 Glycosyl transferase family 2 HM988_RS06625 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 HM988_RS06640 PF02075 Crossover junction endodeoxyribonuclease RuvC HM988_RS06655 PF06969 HemN C-terminal domain HM988_RS06655 PF04055 Radical SAM superfamily HM988_RS06675 PF04237 YjbR HM988_RS06680 PF08274 PhnA Zinc-Ribbon HM988_RS06680 PF03831 PhnA domain HM988_RS06725 PF00392 Bacterial regulatory proteins, gntR family HM988_RS06725 PF07702 UTRA domain HM988_RS06730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HM988_RS06730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HM988_RS06735 PF01261 Xylose isomerase-like TIM barrel HM988_RS06740 PF02780 Transketolase, C-terminal domain HM988_RS06740 PF00456 Transketolase, thiamine diphosphate binding domain HM988_RS06740 PF02779 Transketolase, pyrimidine binding domain HM988_RS06745 PF00923 Transaldolase/Fructose-6-phosphate aldolase HM988_RS06750 PF02543 Carbamoyltransferase N-terminus HM988_RS06750 PF16861 Carbamoyltransferase C-terminus HM988_RS06760 PF00106 short chain dehydrogenase HM988_RS06765 PF03786 D-mannonate dehydratase (UxuA) HM988_RS06770 PF03786 D-mannonate dehydratase (UxuA) HM988_RS06775 PF02614 Glucuronate isomerase HM988_RS06785 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HM988_RS06790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HM988_RS06795 PF00596 Class II Aldolase and Adducin N-terminal domain HM988_RS06800 PF11762 L-arabinose isomerase C-terminal domain HM988_RS06800 PF02610 L-arabinose isomerase HM988_RS06805 PF01263 Aldose 1-epimerase HM988_RS06810 PF00474 Sodium:solute symporter family HM988_RS06825 PF04616 Glycosyl hydrolases family 43 HM988_RS06825 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HM988_RS06830 PF14310 Fibronectin type III-like domain HM988_RS06830 PF01915 Glycosyl hydrolase family 3 C-terminal domain HM988_RS06830 PF00933 Glycosyl hydrolase family 3 N terminal domain HM988_RS06830 PF07691 PA14 domain HM988_RS06835 PF03422 Carbohydrate binding module (family 6) HM988_RS06835 PF04616 Glycosyl hydrolases family 43 HM988_RS06850 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HM988_RS06850 PF04616 Glycosyl hydrolases family 43 HM988_RS06860 PF00248 Aldo/keto reductase family HM988_RS06875 PF03426 Carbohydrate binding domain (family 15) HM988_RS06875 PF00331 Glycosyl hydrolase family 10 HM988_RS06880 PF17189 Glycosyl hydrolase family 30 beta sandwich domain HM988_RS06895 PF07980 SusD family HM988_RS06895 PF14322 Starch-binding associating with outer membrane HM988_RS06900 PF07715 TonB-dependent Receptor Plug Domain HM988_RS06900 PF00593 TonB dependent receptor HM988_RS06905 PF04616 Glycosyl hydrolases family 43 HM988_RS06915 PF00331 Glycosyl hydrolase family 10 HM988_RS06925 PF07477 Glycosyl hydrolase family 67 C-terminus HM988_RS06925 PF07488 Glycosyl hydrolase family 67 middle domain HM988_RS06925 PF03648 Glycosyl hydrolase family 67 N-terminus HM988_RS06930 PF14310 Fibronectin type III-like domain HM988_RS06930 PF00933 Glycosyl hydrolase family 3 N terminal domain HM988_RS06930 PF01915 Glycosyl hydrolase family 3 C-terminal domain HM988_RS06930 PF07691 PA14 domain HM988_RS06945 PF00356 Bacterial regulatory proteins, lacI family HM988_RS06950 PF03190 Protein of unknown function, DUF255 HM988_RS06965 PF08450 SMP-30/Gluconolactonase/LRE-like region HM988_RS06970 PF00331 Glycosyl hydrolase family 10 HM988_RS06975 PF00128 Alpha amylase, catalytic domain HM988_RS06990 PF07980 SusD family HM988_RS06995 PF07715 TonB-dependent Receptor Plug Domain HM988_RS06995 PF00593 TonB dependent receptor HM988_RS07000 PF00356 Bacterial regulatory proteins, lacI family HM988_RS07010 PF13419 Haloacid dehalogenase-like hydrolase HM988_RS07015 PF03633 Glycosyl hydrolase family 65, C-terminal domain HM988_RS07015 PF03636 Glycosyl hydrolase family 65, N-terminal domain HM988_RS07015 PF03632 Glycosyl hydrolase family 65 central catalytic domain HM988_RS07020 PF10438 Cyclo-malto-dextrinase C-terminal domain HM988_RS07020 PF09087 Cyclomaltodextrinase, N-terminal HM988_RS07020 PF00128 Alpha amylase, catalytic domain HM988_RS07025 PF16338 Domain of unknown function (DUF4968) HM988_RS07025 PF17137 Domain of unknown function (DUF5110) HM988_RS07025 PF01055 Glycosyl hydrolases family 31 HM988_RS07025 PF13802 Galactose mutarotase-like HM988_RS07030 PF00128 Alpha amylase, catalytic domain HM988_RS07030 PF17999 Pullulanase N1-terminal domain HM988_RS07030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HM988_RS07035 PF02903 Alpha amylase, N-terminal ig-like domain HM988_RS07035 PF16657 Maltogenic Amylase, C-terminal domain HM988_RS07035 PF00128 Alpha amylase, catalytic domain HM988_RS07040 PF00128 Alpha amylase, catalytic domain HM988_RS07045 PF10566 Glycoside hydrolase 97 HM988_RS07045 PF14508 Glycosyl-hydrolase 97 N-terminal HM988_RS07045 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation HM988_RS07065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HM988_RS07070 PF03358 NADPH-dependent FMN reductase HM988_RS07070 PF01566 Natural resistance-associated macrophage protein HM988_RS07085 PF03781 Sulfatase-modifying factor enzyme 1 HM988_RS07085 PF12867 DinB superfamily HM988_RS07100 PF10011 Predicted membrane protein (DUF2254) HM988_RS07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS07110 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS07110 PF09308 LuxQ, periplasmic HM988_RS07110 PF00072 Response regulator receiver domain HM988_RS07150 PF01479 S4 domain HM988_RS07150 PF00849 RNA pseudouridylate synthase HM988_RS07165 PF01548 Transposase HM988_RS07165 PF02371 Transposase IS116/IS110/IS902 family HM988_RS07180 PF17944 Arginine decarboxylase C-terminal helical extension HM988_RS07180 PF17810 Arginine decarboxylase helical bundle domain HM988_RS07180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HM988_RS07185 PF00491 Arginase family HM988_RS07190 PF01916 Deoxyhypusine synthase HM988_RS07195 PF00583 Acetyltransferase (GNAT) family HM988_RS07195 PF00795 Carbon-nitrogen hydrolase HM988_RS07225 PF00535 Glycosyl transferase family 2 HM988_RS07235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HM988_RS07235 PF04324 BFD-like [2Fe-2S] binding domain HM988_RS07235 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS07235 PF18267 Rubredoxin NAD+ reductase C-terminal domain HM988_RS07235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HM988_RS07260 PF00535 Glycosyl transferase family 2 HM988_RS07275 PF01209 ubiE/COQ5 methyltransferase family HM988_RS07280 PF01048 Phosphorylase superfamily HM988_RS07300 PF02627 Carboxymuconolactone decarboxylase family HM988_RS07305 PF02625 XdhC and CoxI family HM988_RS07305 PF13478 XdhC Rossmann domain HM988_RS07320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HM988_RS07320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HM988_RS07325 PF01799 [2Fe-2S] binding domain HM988_RS07325 PF00111 2Fe-2S iron-sulfur cluster binding domain HM988_RS07335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HM988_RS07355 PF00561 alpha/beta hydrolase fold HM988_RS07360 PF01053 Cys/Met metabolism PLP-dependent enzyme HM988_RS07370 PF00682 HMGL-like HM988_RS07370 PF08502 LeuA allosteric (dimerisation) domain HM988_RS07375 PF00330 Aconitase family (aconitate hydratase) HM988_RS07380 PF00694 Aconitase C-terminal domain HM988_RS07385 PF00180 Isocitrate/isopropylmalate dehydrogenase HM988_RS07390 PF00311 Phosphoenolpyruvate carboxylase HM988_RS07395 PF00909 Ammonium Transporter Family HM988_RS07400 PF00543 Nitrogen regulatory protein P-II HM988_RS07405 PF00909 Ammonium Transporter Family HM988_RS07415 PF01493 GXGXG motif HM988_RS07415 PF01645 Conserved region in glutamate synthase HM988_RS07415 PF04898 Glutamate synthase central domain HM988_RS07415 PF00310 Glutamine amidotransferases class-II HM988_RS07420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HM988_RS07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS07425 PF01502 Phosphoribosyl-AMP cyclohydrolase HM988_RS07425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HM988_RS07430 PF00977 Histidine biosynthesis protein HM988_RS07435 PF00977 Histidine biosynthesis protein HM988_RS07440 PF00117 Glutamine amidotransferase class-I HM988_RS07445 PF00475 Imidazoleglycerol-phosphate dehydratase HM988_RS07450 PF00155 Aminotransferase class I and II HM988_RS07455 PF00815 Histidinol dehydrogenase HM988_RS07460 PF08029 HisG, C-terminal domain HM988_RS07460 PF01634 ATP phosphoribosyltransferase HM988_RS07465 PF00206 Lyase HM988_RS07475 PF00696 Amino acid kinase family HM988_RS07480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HM988_RS07480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HM988_RS07485 PF00202 Aminotransferase class-III HM988_RS07495 PF02774 Semialdehyde dehydrogenase, dimerisation domain HM988_RS07495 PF01118 Semialdehyde dehydrogenase, NAD binding domain HM988_RS07500 PF00764 Arginosuccinate synthase HM988_RS07510 PF00171 Aldehyde dehydrogenase family HM988_RS07515 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS07515 PF00585 C-terminal regulatory domain of Threonine dehydratase HM988_RS07520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HM988_RS07520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HM988_RS07530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HM988_RS07530 PF00205 Thiamine pyrophosphate enzyme, central domain HM988_RS07530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HM988_RS07535 PF00920 Dehydratase family HM988_RS07540 PF02469 Fasciclin domain HM988_RS07550 PF07715 TonB-dependent Receptor Plug Domain HM988_RS07550 PF00593 TonB dependent receptor HM988_RS07555 PF14322 Starch-binding associating with outer membrane HM988_RS07555 PF07980 SusD family HM988_RS07580 PF14310 Fibronectin type III-like domain HM988_RS07580 PF01915 Glycosyl hydrolase family 3 C-terminal domain HM988_RS07580 PF00933 Glycosyl hydrolase family 3 N terminal domain HM988_RS07585 PF00933 Glycosyl hydrolase family 3 N terminal domain HM988_RS07585 PF01915 Glycosyl hydrolase family 3 C-terminal domain HM988_RS07585 PF14310 Fibronectin type III-like domain HM988_RS07590 PF02837 Glycosyl hydrolases family 2, sugar binding domain HM988_RS07590 PF16355 Domain of unknown function (DUF4982) HM988_RS07590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HM988_RS07590 PF00703 Glycosyl hydrolases family 2 HM988_RS07600 PF16347 Domain of unknown function (DUF4976) HM988_RS07600 PF00884 Sulfatase HM988_RS07615 PF00083 Sugar (and other) transporter HM988_RS07670 PF03309 Type III pantothenate kinase HM988_RS07695 PF03471 Transporter associated domain HM988_RS07695 PF00571 CBS domain HM988_RS07710 PF01541 GIY-YIG catalytic domain HM988_RS07715 PF00368 Hydroxymethylglutaryl-coenzyme A reductase HM988_RS07720 PF00326 Prolyl oligopeptidase family HM988_RS07720 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HM988_RS07725 PF00854 POT family HM988_RS07730 PF00854 POT family HM988_RS07735 PF00085 Thioredoxin HM988_RS07740 PF03772 Competence protein HM988_RS07740 PF13567 Domain of unknown function (DUF4131) HM988_RS07740 PF00753 Metallo-beta-lactamase superfamily HM988_RS07745 PF00877 NlpC/P60 family HM988_RS07750 PF02684 Lipid-A-disaccharide synthetase HM988_RS07755 PF01975 Survival protein SurE HM988_RS07760 PF00595 PDZ domain HM988_RS07760 PF03572 Peptidase family S41 HM988_RS07760 PF17804 Tail specific protease N-terminal domain HM988_RS07760 PF11818 C-terminal domain of tail specific protease (DUF3340) HM988_RS07765 PF12911 N-terminal TM domain of oligopeptide transport permease C HM988_RS07765 PF00528 Binding-protein-dependent transport system inner membrane component HM988_RS07770 PF01926 50S ribosome-binding GTPase HM988_RS07775 PF12146 Serine aminopeptidase, S33 HM988_RS07780 PF02381 MraZ protein, putative antitoxin-like HM988_RS07785 PF01795 MraW methylase family HM988_RS07795 PF03717 Penicillin-binding Protein dimerisation domain HM988_RS07795 PF00905 Penicillin binding protein transpeptidase domain HM988_RS07800 PF02875 Mur ligase family, glutamate ligase domain HM988_RS07800 PF01225 Mur ligase family, catalytic domain HM988_RS07800 PF08245 Mur ligase middle domain HM988_RS07805 PF00953 Glycosyl transferase family 4 HM988_RS07805 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HM988_RS07815 PF08245 Mur ligase middle domain HM988_RS07815 PF02875 Mur ligase family, glutamate ligase domain HM988_RS07820 PF01098 Cell cycle protein HM988_RS07825 PF04101 Glycosyltransferase family 28 C-terminal domain HM988_RS07825 PF03033 Glycosyltransferase family 28 N-terminal domain HM988_RS07830 PF08245 Mur ligase middle domain HM988_RS07830 PF01225 Mur ligase family, catalytic domain HM988_RS07830 PF02875 Mur ligase family, glutamate ligase domain HM988_RS07840 PF02491 SHS2 domain inserted in FTSA HM988_RS07845 PF12327 FtsZ family, C-terminal domain HM988_RS07845 PF00091 Tubulin/FtsZ family, GTPase domain HM988_RS07850 PF09424 Yqey-like protein HM988_RS07870 PF12805 FUSC-like inner membrane protein yccS HM988_RS07875 PF01645 Conserved region in glutamate synthase HM988_RS07930 PF01507 Phosphoadenosine phosphosulfate reductase family HM988_RS07935 PF00009 Elongation factor Tu GTP binding domain HM988_RS07940 PF00459 Inositol monophosphatase family HM988_RS07945 PF16363 GDP-mannose 4,6 dehydratase HM988_RS07950 PF01370 NAD dependent epimerase/dehydratase family HM988_RS07955 PF02350 UDP-N-acetylglucosamine 2-epimerase HM988_RS07960 PF16363 GDP-mannose 4,6 dehydratase HM988_RS07965 PF00483 Nucleotidyl transferase HM988_RS07970 PF14667 Polysaccharide biosynthesis C-terminal domain HM988_RS07980 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HM988_RS07995 PF08889 WbqC-like protein family HM988_RS08005 PF00535 Glycosyl transferase family 2 HM988_RS08010 PF01575 MaoC like domain HM988_RS08020 PF00550 Phosphopantetheine attachment site HM988_RS08035 PF00534 Glycosyl transferases group 1 HM988_RS08035 PF13439 Glycosyltransferase Family 4 HM988_RS08040 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS08040 PF00483 Nucleotidyl transferase HM988_RS08045 PF00535 Glycosyl transferase family 2 HM988_RS08085 PF01370 NAD dependent epimerase/dehydratase family HM988_RS08090 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS08095 PF00535 Glycosyl transferase family 2 HM988_RS08100 PF00953 Glycosyl transferase family 4 HM988_RS08115 PF00571 CBS domain HM988_RS08120 PF00834 Ribulose-phosphate 3 epimerase family HM988_RS08125 PF04539 Sigma-70 region 3 HM988_RS08125 PF00140 Sigma-70 factor, region 1.2 HM988_RS08125 PF03979 Sigma-70 factor, region 1.1 HM988_RS08125 PF04542 Sigma-70 region 2 HM988_RS08125 PF04545 Sigma-70, region 4 HM988_RS08135 PF00171 Aldehyde dehydrogenase family HM988_RS08140 PF01472 PUA domain HM988_RS08140 PF00696 Amino acid kinase family HM988_RS08145 PF03807 NADP oxidoreductase coenzyme F420-dependent HM988_RS08145 PF14748 Pyrroline-5-carboxylate reductase dimerisation HM988_RS08150 PF00535 Glycosyl transferase family 2 HM988_RS08185 PF17191 RecG wedge domain HM988_RS08185 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HM988_RS08185 PF00270 DEAD/DEAH box helicase HM988_RS08195 PF00013 KH domain HM988_RS08195 PF00575 S1 RNA binding domain HM988_RS08195 PF03725 3' exoribonuclease family, domain 2 HM988_RS08195 PF01138 3' exoribonuclease family, domain 1 HM988_RS08195 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HM988_RS08200 PF00312 Ribosomal protein S15 HM988_RS08205 PF17203 Single cache domain 3 HM988_RS08205 PF00989 PAS fold HM988_RS08205 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HM988_RS08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS08210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS08220 PF01039 Carboxyl transferase domain HM988_RS08225 PF01116 Fructose-bisphosphate aldolase class-II HM988_RS08235 PF00588 SpoU rRNA Methylase family HM988_RS08235 PF08032 RNA 2'-O ribose methyltransferase substrate binding HM988_RS08245 PF01209 ubiE/COQ5 methyltransferase family HM988_RS08250 PF02080 TrkA-C domain HM988_RS08250 PF02254 TrkA-N domain HM988_RS08255 PF02386 Cation transport protein HM988_RS08270 PF00155 Aminotransferase class I and II HM988_RS08275 PF00487 Fatty acid desaturase HM988_RS08280 PF02527 rRNA small subunit methyltransferase G HM988_RS08295 PF08534 Redoxin HM988_RS08310 PF00171 Aldehyde dehydrogenase family HM988_RS08320 PF04379 ApaG domain HM988_RS08325 PF00282 Pyridoxal-dependent decarboxylase conserved domain HM988_RS08335 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HM988_RS08335 PF11973 NQRA C-terminal domain HM988_RS08340 PF03116 NQR2, RnfD, RnfE family HM988_RS08345 PF04205 FMN-binding domain HM988_RS08350 PF02508 Rnf-Nqr subunit, membrane protein HM988_RS08360 PF00175 Oxidoreductase NAD-binding domain HM988_RS08360 PF00111 2Fe-2S iron-sulfur cluster binding domain HM988_RS08360 PF00970 Oxidoreductase FAD-binding domain HM988_RS08380 PF04235 Protein of unknown function (DUF418) HM988_RS08385 PF04235 Protein of unknown function (DUF418) HM988_RS08390 PF00561 alpha/beta hydrolase fold HM988_RS08400 PF01042 Endoribonuclease L-PSP HM988_RS08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS08420 PF12282 Signal transduction histidine kinase HM988_RS08420 PF07568 Histidine kinase HM988_RS08440 PF02424 ApbE family HM988_RS08450 PF01209 ubiE/COQ5 methyltransferase family HM988_RS08460 PF00557 Metallopeptidase family M24 HM988_RS08470 PF01676 Metalloenzyme superfamily HM988_RS08470 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HM988_RS08485 PF03575 Peptidase family S51 HM988_RS08515 PF02416 mttA/Hcf106 family HM988_RS08520 PF01596 O-methyltransferase HM988_RS08535 PF06052 3-hydroxyanthranilic acid dioxygenase HM988_RS08545 PF00171 Aldehyde dehydrogenase family HM988_RS08555 PF01042 Endoribonuclease L-PSP HM988_RS08560 PF01494 FAD binding domain HM988_RS08565 PF00266 Aminotransferase class-V HM988_RS08585 PF01625 Peptide methionine sulfoxide reductase HM988_RS08595 PF01784 NIF3 (NGG1p interacting factor 3) HM988_RS08600 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HM988_RS08605 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS08605 PF09308 LuxQ, periplasmic HM988_RS08605 PF00072 Response regulator receiver domain HM988_RS08610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HM988_RS08610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HM988_RS08615 PF04055 Radical SAM superfamily HM988_RS08625 PF00535 Glycosyl transferase family 2 HM988_RS08635 PF00230 Major intrinsic protein HM988_RS08645 PF08281 Sigma-70, region 4 HM988_RS08645 PF04542 Sigma-70 region 2 HM988_RS08650 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HM988_RS08650 PF01565 FAD binding domain HM988_RS08655 PF00155 Aminotransferase class I and II HM988_RS08665 PF10458 Valyl tRNA synthetase tRNA binding arm HM988_RS08665 PF00133 tRNA synthetases class I (I, L, M and V) HM988_RS08665 PF08264 Anticodon-binding domain of tRNA HM988_RS08670 PF01098 Cell cycle protein HM988_RS08675 PF00905 Penicillin binding protein transpeptidase domain HM988_RS08675 PF03717 Penicillin-binding Protein dimerisation domain HM988_RS08695 PF02142 MGS-like domain HM988_RS08695 PF01808 AICARFT/IMPCHase bienzyme HM988_RS08700 PF02687 FtsX-like permease family HM988_RS08700 PF00005 ABC transporter HM988_RS08700 PF12704 MacB-like periplasmic core domain HM988_RS08705 PF00207 Alpha-2-macroglobulin family HM988_RS08705 PF07703 Alpha-2-macroglobulin bait region domain HM988_RS08705 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HM988_RS08705 PF01835 MG2 domain HM988_RS08705 PF07678 A-macroglobulin TED domain HM988_RS08715 PF03466 LysR substrate binding domain HM988_RS08715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HM988_RS08730 PF00361 Proton-conducting membrane transporter HM988_RS08730 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HM988_RS08735 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HM988_RS08745 PF00005 ABC transporter HM988_RS08745 PF03412 Peptidase C39 family HM988_RS08745 PF00664 ABC transporter transmembrane region HM988_RS08760 PF02875 Mur ligase family, glutamate ligase domain HM988_RS08760 PF01225 Mur ligase family, catalytic domain HM988_RS08760 PF08245 Mur ligase middle domain HM988_RS08765 PF08534 Redoxin HM988_RS08800 PF04002 RadC-like JAB domain HM988_RS08810 PF13419 Haloacid dehalogenase-like hydrolase HM988_RS08820 PF16193 AAA C-terminal domain HM988_RS08820 PF12002 MgsA AAA+ ATPase C terminal HM988_RS08820 PF00004 ATPase family associated with various cellular activities (AAA) HM988_RS08830 PF08032 RNA 2'-O ribose methyltransferase substrate binding HM988_RS08830 PF00588 SpoU rRNA Methylase family HM988_RS08840 PF00164 Ribosomal protein S12/S23 HM988_RS08845 PF00177 Ribosomal protein S7p/S5e HM988_RS08850 PF03144 Elongation factor Tu domain 2 HM988_RS08850 PF00009 Elongation factor Tu GTP binding domain HM988_RS08850 PF03764 Elongation factor G, domain IV HM988_RS08850 PF14492 Elongation Factor G, domain II HM988_RS08850 PF00679 Elongation factor G C-terminus HM988_RS08855 PF00338 Ribosomal protein S10p/S20e HM988_RS08860 PF00297 Ribosomal protein L3 HM988_RS08865 PF00573 Ribosomal protein L4/L1 family HM988_RS08870 PF00276 Ribosomal protein L23 HM988_RS08875 PF00181 Ribosomal Proteins L2, RNA binding domain HM988_RS08875 PF03947 Ribosomal Proteins L2, C-terminal domain HM988_RS08880 PF00203 Ribosomal protein S19 HM988_RS08885 PF00237 Ribosomal protein L22p/L17e HM988_RS08890 PF00189 Ribosomal protein S3, C-terminal domain HM988_RS08890 PF07650 KH domain HM988_RS08895 PF00252 Ribosomal protein L16p/L10e HM988_RS08900 PF00831 Ribosomal L29 protein HM988_RS08905 PF00366 Ribosomal protein S17 HM988_RS08910 PF00238 Ribosomal protein L14p/L23e HM988_RS08915 PF00467 KOW motif HM988_RS08915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HM988_RS08920 PF00673 ribosomal L5P family C-terminus HM988_RS08920 PF00281 Ribosomal protein L5 HM988_RS08925 PF00253 Ribosomal protein S14p/S29e HM988_RS08930 PF00410 Ribosomal protein S8 HM988_RS08935 PF00347 Ribosomal protein L6 HM988_RS08940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HM988_RS08945 PF03719 Ribosomal protein S5, C-terminal domain HM988_RS08945 PF00333 Ribosomal protein S5, N-terminal domain HM988_RS08950 PF00327 Ribosomal protein L30p/L7e HM988_RS08955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HM988_RS08960 PF00344 SecY translocase HM988_RS08965 PF01176 Translation initiation factor 1A / IF-1 HM988_RS08970 PF00444 Ribosomal protein L36 HM988_RS08975 PF00416 Ribosomal protein S13/S18 HM988_RS08980 PF00411 Ribosomal protein S11 HM988_RS08985 PF01479 S4 domain HM988_RS08985 PF00163 Ribosomal protein S4/S9 N-terminal domain HM988_RS08990 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HM988_RS08990 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HM988_RS08990 PF01000 RNA polymerase Rpb3/RpoA insert domain HM988_RS08995 PF01196 Ribosomal protein L17 HM988_RS09000 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HM988_RS09000 PF00117 Glutamine amidotransferase class-I HM988_RS09005 PF00113 Enolase, C-terminal TIM barrel domain HM988_RS09005 PF03952 Enolase, N-terminal domain HM988_RS09015 PF00285 Citrate synthase, C-terminal domain HM988_RS09035 PF02666 Phosphatidylserine decarboxylase HM988_RS09050 PF17862 AAA+ lid domain HM988_RS09050 PF00004 ATPase family associated with various cellular activities (AAA) HM988_RS09050 PF01434 Peptidase family M41 HM988_RS09070 PF00156 Phosphoribosyl transferase domain HM988_RS09075 PF00293 NUDIX domain HM988_RS09090 PF08443 RimK-like ATP-grasp domain HM988_RS09090 PF18030 RimK PreATP-grasp domain HM988_RS09110 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS09110 PF16736 Single Cache-like HM988_RS09110 PF00989 PAS fold HM988_RS09115 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) HM988_RS09120 PF03485 Arginyl tRNA synthetase N terminal domain HM988_RS09120 PF05746 DALR anticodon binding domain HM988_RS09120 PF00750 tRNA synthetases class I (R) HM988_RS09135 PF12867 DinB superfamily HM988_RS09165 PF05872 Bacterial protein of unknown function (DUF853) HM988_RS09175 PF02130 Uncharacterized protein family UPF0054 HM988_RS09175 PF07883 Cupin domain HM988_RS09185 PF01479 S4 domain HM988_RS09185 PF00849 RNA pseudouridylate synthase HM988_RS09200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HM988_RS09200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HM988_RS09210 PF02881 SRP54-type protein, helical bundle domain HM988_RS09210 PF00448 SRP54-type protein, GTPase domain HM988_RS09210 PF02978 Signal peptide binding domain HM988_RS09215 PF04055 Radical SAM superfamily HM988_RS09225 PF00733 Asparagine synthase HM988_RS09225 PF13537 Glutamine amidotransferase domain HM988_RS09230 PF00986 DNA gyrase B subunit, carboxyl terminus HM988_RS09230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS09230 PF00204 DNA gyrase B HM988_RS09230 PF01751 Toprim domain HM988_RS09235 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS09235 PF09308 LuxQ, periplasmic HM988_RS09235 PF00072 Response regulator receiver domain HM988_RS09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS09245 PF00056 lactate/malate dehydrogenase, NAD binding domain HM988_RS09245 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HM988_RS09260 PF02355 Protein export membrane protein HM988_RS09260 PF07549 SecD/SecF GG Motif HM988_RS09280 PF01790 Prolipoprotein diacylglyceryl transferase HM988_RS09285 PF01809 Putative membrane protein insertion efficiency factor HM988_RS09290 PF01406 tRNA synthetases class I (C) catalytic domain HM988_RS09290 PF09190 DALR domain HM988_RS09295 PF01227 GTP cyclohydrolase I HM988_RS09320 PF03129 Anticodon binding domain HM988_RS09320 PF09180 Prolyl-tRNA synthetase, C-terminal HM988_RS09320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HM988_RS09330 PF01649 Ribosomal protein S20 HM988_RS09350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HM988_RS09350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HM988_RS09355 PF07690 Major Facilitator Superfamily HM988_RS09370 PF00072 Response regulator receiver domain HM988_RS09375 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS09375 PF08446 PAS fold HM988_RS09375 PF00360 Phytochrome region HM988_RS09375 PF01590 GAF domain HM988_RS09375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS09410 PF04231 Endonuclease I HM988_RS09415 PF01699 Sodium/calcium exchanger protein HM988_RS09420 PF03951 Glutamine synthetase, beta-Grasp domain HM988_RS09420 PF00120 Glutamine synthetase, catalytic domain HM988_RS09425 PF12437 Glutamine synthetase type III N terminal HM988_RS09425 PF18318 Glutamine synthetase C-terminal domain HM988_RS09425 PF00120 Glutamine synthetase, catalytic domain HM988_RS09440 PF00586 AIR synthase related protein, N-terminal domain HM988_RS09440 PF02769 AIR synthase related protein, C-terminal domain HM988_RS09450 PF00005 ABC transporter HM988_RS09460 PF00472 RF-1 domain HM988_RS09460 PF03462 PCRF domain HM988_RS09465 PF10502 Signal peptidase, peptidase S26 HM988_RS09470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HM988_RS09475 PF01497 Periplasmic binding protein HM988_RS09490 PF00551 Formyl transferase HM988_RS09490 PF01842 ACT domain HM988_RS09495 PF02310 B12 binding domain HM988_RS09495 PF01642 Methylmalonyl-CoA mutase HM988_RS09515 PF01037 Lrp/AsnC ligand binding domain HM988_RS09535 PF07690 Major Facilitator Superfamily HM988_RS09550 PF00793 DAHP synthetase I family HM988_RS09560 PF03144 Elongation factor Tu domain 2 HM988_RS09560 PF00009 Elongation factor Tu GTP binding domain HM988_RS09560 PF14492 Elongation Factor G, domain II HM988_RS09560 PF00679 Elongation factor G C-terminus HM988_RS09590 PF00535 Glycosyl transferase family 2 HM988_RS09600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HM988_RS09605 PF01943 Polysaccharide biosynthesis protein HM988_RS09625 PF13439 Glycosyltransferase Family 4 HM988_RS09625 PF00534 Glycosyl transferases group 1 HM988_RS09630 PF05523 WxcM-like, C-terminal HM988_RS09635 PF00535 Glycosyl transferase family 2 HM988_RS09635 PF01501 Glycosyl transferase family 8 HM988_RS09655 PF00005 ABC transporter HM988_RS09660 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS09665 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HM988_RS09670 PF00218 Indole-3-glycerol phosphate synthase HM988_RS09675 PF00591 Glycosyl transferase family, a/b domain HM988_RS09675 PF02885 Glycosyl transferase family, helical bundle domain HM988_RS09680 PF02885 Glycosyl transferase family, helical bundle domain HM988_RS09680 PF00117 Glutamine amidotransferase class-I HM988_RS09680 PF00591 Glycosyl transferase family, a/b domain HM988_RS09685 PF04715 Anthranilate synthase component I, N terminal region HM988_RS09685 PF00425 chorismate binding enzyme HM988_RS09695 PF01047 MarR family HM988_RS09700 PF00085 Thioredoxin HM988_RS09710 PF00581 Rhodanese-like domain HM988_RS09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS09730 PF00989 PAS fold HM988_RS09730 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS09735 PF02954 Bacterial regulatory protein, Fis family HM988_RS09735 PF00072 Response regulator receiver domain HM988_RS09735 PF00158 Sigma-54 interaction domain HM988_RS09755 PF12704 MacB-like periplasmic core domain HM988_RS09755 PF02687 FtsX-like permease family HM988_RS09755 PF00005 ABC transporter HM988_RS09760 PF02687 FtsX-like permease family HM988_RS09760 PF12704 MacB-like periplasmic core domain HM988_RS09770 PF02687 FtsX-like permease family HM988_RS09770 PF12704 MacB-like periplasmic core domain HM988_RS09785 PF00005 ABC transporter HM988_RS09815 PF01625 Peptide methionine sulfoxide reductase HM988_RS09820 PF01625 Peptide methionine sulfoxide reductase HM988_RS09825 PF01641 SelR domain HM988_RS09855 PF00072 Response regulator receiver domain HM988_RS09855 PF08769 Sporulation initiation factor Spo0A C terminal HM988_RS09860 PF03705 CheR methyltransferase, all-alpha domain HM988_RS09860 PF08448 PAS fold HM988_RS09860 PF01339 CheB methylesterase HM988_RS09860 PF01739 CheR methyltransferase, SAM binding domain HM988_RS09865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HM988_RS09870 PF00884 Sulfatase HM988_RS09875 PF00455 DeoR C terminal sensor domain HM988_RS09875 PF08220 DeoR-like helix-turn-helix domain HM988_RS09880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HM988_RS09880 PF01266 FAD dependent oxidoreductase HM988_RS09885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HM988_RS09885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HM988_RS09890 PF00230 Major intrinsic protein HM988_RS09900 PF00593 TonB dependent receptor HM988_RS09900 PF07715 TonB-dependent Receptor Plug Domain HM988_RS09925 PF16658 Class II release factor RF3, C-terminal domain HM988_RS09925 PF03144 Elongation factor Tu domain 2 HM988_RS09925 PF00009 Elongation factor Tu GTP binding domain HM988_RS09940 PF00691 OmpA family HM988_RS09940 PF05736 OprF membrane domain HM988_RS09945 PF00293 NUDIX domain HM988_RS09955 PF01238 Phosphomannose isomerase type I HM988_RS09990 PF12146 Serine aminopeptidase, S33 HM988_RS09990 PF13026 Protein of unknown function (DUF3887) HM988_RS09995 PF01427 D-ala-D-ala dipeptidase HM988_RS10015 PF08281 Sigma-70, region 4 HM988_RS10015 PF04542 Sigma-70 region 2 HM988_RS10030 PF00270 DEAD/DEAH box helicase HM988_RS10030 PF00271 Helicase conserved C-terminal domain HM988_RS10035 PF05971 RNA methyltransferase HM988_RS10050 PF01795 MraW methylase family HM988_RS10055 PF02436 Conserved carboxylase domain HM988_RS10055 PF02785 Biotin carboxylase C-terminal domain HM988_RS10055 PF00289 Biotin carboxylase, N-terminal domain HM988_RS10055 PF00364 Biotin-requiring enzyme HM988_RS10055 PF00682 HMGL-like HM988_RS10055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HM988_RS10075 PF00144 Beta-lactamase HM988_RS10075 PF11954 Domain of unknown function (DUF3471) HM988_RS10085 PF07715 TonB-dependent Receptor Plug Domain HM988_RS10085 PF00593 TonB dependent receptor HM988_RS10090 PF00144 Beta-lactamase HM988_RS10090 PF11954 Domain of unknown function (DUF3471) HM988_RS10100 PF00183 Hsp90 protein HM988_RS10110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HM988_RS10110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HM988_RS10175 PF07693 KAP family P-loop domain HM988_RS10245 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HM988_RS10270 PF01337 Barstar (barnase inhibitor) HM988_RS10290 PF00474 Sodium:solute symporter family HM988_RS10310 PF02132 RecR protein HM988_RS10310 PF13662 Toprim domain HM988_RS10335 PF00364 Biotin-requiring enzyme HM988_RS10335 PF02817 e3 binding domain HM988_RS10335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HM988_RS10340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HM988_RS10345 PF10417 C-terminal domain of 1-Cys peroxiredoxin HM988_RS10345 PF00578 AhpC/TSA family HM988_RS10365 PF00929 Exonuclease HM988_RS10370 PF01557 Fumarylacetoacetate (FAA) hydrolase family HM988_RS10380 PF18146 Damage-inducible protein CinA KH domain HM988_RS10380 PF02464 Competence-damaged protein HM988_RS10380 PF00994 Probable molybdopterin binding domain HM988_RS10385 PF00830 Ribosomal L28 family HM988_RS10390 PF00471 Ribosomal protein L33 HM988_RS10400 PF02881 SRP54-type protein, helical bundle domain HM988_RS10400 PF00448 SRP54-type protein, GTPase domain HM988_RS10405 PF01425 Amidase HM988_RS10425 PF04055 Radical SAM superfamily HM988_RS10425 PF18693 TRAM domain HM988_RS10425 PF00919 Uncharacterized protein family UPF0004 HM988_RS10435 PF07715 TonB-dependent Receptor Plug Domain HM988_RS10435 PF00593 TonB dependent receptor HM988_RS10440 PF00248 Aldo/keto reductase family HM988_RS10445 PF00561 alpha/beta hydrolase fold HM988_RS10455 PF07995 Glucose / Sorbosone dehydrogenase HM988_RS10495 PF10079 Bacillithiol biosynthesis BshC HM988_RS10535 PF00117 Glutamine amidotransferase class-I HM988_RS10535 PF00958 GMP synthase C terminal domain HM988_RS10535 PF02540 NAD synthase HM988_RS10555 PF06418 CTP synthase N-terminus HM988_RS10555 PF00117 Glutamine amidotransferase class-I HM988_RS10560 PF14849 YidC periplasmic domain HM988_RS10560 PF02096 60Kd inner membrane protein HM988_RS10565 PF02469 Fasciclin domain HM988_RS10585 PF03060 Nitronate monooxygenase HM988_RS10595 PF02080 TrkA-C domain HM988_RS10595 PF00999 Sodium/hydrogen exchanger family HM988_RS10595 PF02254 TrkA-N domain HM988_RS10620 PF01554 MatE HM988_RS10630 PF01569 PAP2 superfamily HM988_RS10635 PF01569 PAP2 superfamily HM988_RS10645 PF02684 Lipid-A-disaccharide synthetase HM988_RS10645 PF07578 Lipid A Biosynthesis N-terminal domain HM988_RS10650 PF00535 Glycosyl transferase family 2 HM988_RS10665 PF08281 Sigma-70, region 4 HM988_RS10665 PF04542 Sigma-70 region 2 HM988_RS10680 PF11954 Domain of unknown function (DUF3471) HM988_RS10680 PF00144 Beta-lactamase HM988_RS10685 PF01551 Peptidase family M23 HM988_RS10685 PF01476 LysM domain HM988_RS10740 PF01541 GIY-YIG catalytic domain HM988_RS10745 PF07516 SecA Wing and Scaffold domain HM988_RS10745 PF01043 SecA preprotein cross-linking domain HM988_RS10745 PF07517 SecA DEAD-like domain HM988_RS10755 PF01923 Cobalamin adenosyltransferase HM988_RS10760 PF00005 ABC transporter HM988_RS10770 PF12848 ABC transporter HM988_RS10770 PF16326 ABC transporter C-terminal domain HM988_RS10770 PF00005 ABC transporter HM988_RS10780 PF02706 Chain length determinant protein HM988_RS10780 PF13807 G-rich domain on putative tyrosine kinase HM988_RS10780 PF13614 AAA domain HM988_RS10785 PF02397 Bacterial sugar transferase HM988_RS10790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HM988_RS10790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HM988_RS10790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HM988_RS10795 PF01370 NAD dependent epimerase/dehydratase family HM988_RS10800 PF16363 GDP-mannose 4,6 dehydratase HM988_RS10810 PF00005 ABC transporter HM988_RS10810 PF14524 Wzt C-terminal domain HM988_RS10835 PF08666 SAF domain HM988_RS10835 PF03102 NeuB family HM988_RS10845 PF02350 UDP-N-acetylglucosamine 2-epimerase HM988_RS10850 PF02348 Cytidylyltransferase HM988_RS10860 PF00534 Glycosyl transferases group 1 HM988_RS10860 PF13477 Glycosyl transferase 4-like HM988_RS10910 PF02397 Bacterial sugar transferase HM988_RS10925 PF01066 CDP-alcohol phosphatidyltransferase HM988_RS10930 PF05661 Protein of unknown function (DUF808) HM988_RS10935 PF00005 ABC transporter HM988_RS10935 PF12399 Branched-chain amino acid ATP-binding cassette transporter HM988_RS10940 PF02627 Carboxymuconolactone decarboxylase family HM988_RS10945 PF00902 Sec-independent protein translocase protein (TatC) HM988_RS10950 PF01380 SIS domain HM988_RS10950 PF00571 CBS domain HM988_RS10955 PF00270 DEAD/DEAH box helicase HM988_RS10955 PF16124 RecQ zinc-binding HM988_RS10955 PF00570 HRDC domain HM988_RS10955 PF00271 Helicase conserved C-terminal domain HM988_RS10955 PF09382 RQC domain HM988_RS10965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HM988_RS11005 PF01804 Penicillin amidase HM988_RS11020 PF02463 RecF/RecN/SMC N terminal domain HM988_RS11030 PF00885 6,7-dimethyl-8-ribityllumazine synthase HM988_RS11040 PF01119 DNA mismatch repair protein, C-terminal domain HM988_RS11040 PF08676 MutL C terminal dimerisation domain HM988_RS11070 PF10502 Signal peptidase, peptidase S26 HM988_RS11075 PF01113 Dihydrodipicolinate reductase, N-terminus HM988_RS11075 PF05173 Dihydrodipicolinate reductase, C-terminus HM988_RS11085 PF02195 ParB-like nuclease domain HM988_RS11085 PF17762 HTH domain found in ParB protein HM988_RS11090 PF13614 AAA domain HM988_RS11105 PF00326 Prolyl oligopeptidase family HM988_RS11105 PF07676 WD40-like Beta Propeller Repeat HM988_RS11110 PF01642 Methylmalonyl-CoA mutase HM988_RS11110 PF02310 B12 binding domain HM988_RS11120 PF01642 Methylmalonyl-CoA mutase HM988_RS11130 PF00485 Phosphoribulokinase / Uridine kinase family HM988_RS11135 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HM988_RS11135 PF00034 Cytochrome c HM988_RS11150 PF00589 Phage integrase family HM988_RS11150 PF02899 Phage integrase, N-terminal SAM-like domain HM988_RS11155 PF12833 Helix-turn-helix domain HM988_RS11155 PF07883 Cupin domain HM988_RS11160 PF00248 Aldo/keto reductase family HM988_RS11165 PF00248 Aldo/keto reductase family HM988_RS11170 PF00248 Aldo/keto reductase family HM988_RS11175 PF00258 Flavodoxin HM988_RS11190 PF12146 Serine aminopeptidase, S33 HM988_RS11225 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS11225 PF18698 Histidine kinase sensor domain HM988_RS11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS11225 PF00989 PAS fold HM988_RS11225 PF00672 HAMP domain HM988_RS11240 PF02384 N-6 DNA Methylase HM988_RS11275 PF00171 Aldehyde dehydrogenase family HM988_RS11295 PF12833 Helix-turn-helix domain HM988_RS11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS11380 PF03150 Di-haem cytochrome c peroxidase HM988_RS11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HM988_RS11405 PF03466 LysR substrate binding domain HM988_RS11410 PF00210 Ferritin-like domain HM988_RS11425 PF17863 AAA lid domain HM988_RS11425 PF07726 ATPase family associated with various cellular activities (AAA) HM988_RS11455 PF03458 UPF0126 domain HM988_RS11495 PF00106 short chain dehydrogenase HM988_RS11560 PF07694 5TMR of 5TMR-LYT HM988_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS11560 PF06580 Histidine kinase HM988_RS11580 PF04397 LytTr DNA-binding domain HM988_RS11580 PF00072 Response regulator receiver domain HM988_RS11595 PF04542 Sigma-70 region 2 HM988_RS11595 PF08281 Sigma-70, region 4 HM988_RS11600 PF10459 Peptidase S46 HM988_RS11635 PF01544 CorA-like Mg2+ transporter protein HM988_RS11650 PF02545 Maf-like protein HM988_RS11690 PF01741 Large-conductance mechanosensitive channel, MscL HM988_RS11695 PF05140 ResB-like family HM988_RS11695 PF01578 Cytochrome C assembly protein HM988_RS11705 PF01053 Cys/Met metabolism PLP-dependent enzyme HM988_RS11715 PF01293 Phosphoenolpyruvate carboxykinase HM988_RS11720 PF03600 Citrate transporter HM988_RS11720 PF02080 TrkA-C domain HM988_RS11725 PF02585 GlcNAc-PI de-N-acetylase HM988_RS11735 PF01588 Putative tRNA binding domain HM988_RS11745 PF00005 ABC transporter HM988_RS11745 PF00664 ABC transporter transmembrane region HM988_RS11750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HM988_RS11750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HM988_RS11755 PF01029 NusB family HM988_RS11765 PF02699 Preprotein translocase subunit HM988_RS11770 PF07715 TonB-dependent Receptor Plug Domain HM988_RS11770 PF00593 TonB dependent receptor HM988_RS11775 PF04134 Protein of unknown function, DUF393 HM988_RS11780 PF01713 Smr domain HM988_RS11780 PF00488 MutS domain V HM988_RS11785 PF03606 C4-dicarboxylate anaerobic carrier HM988_RS11790 PF03167 Uracil DNA glycosylase superfamily HM988_RS11800 PF01048 Phosphorylase superfamily HM988_RS11820 PF02780 Transketolase, C-terminal domain HM988_RS11820 PF02779 Transketolase, pyrimidine binding domain HM988_RS11825 PF00011 Hsp20/alpha crystallin family HM988_RS11830 PF01483 Proprotein convertase P-domain HM988_RS11845 PF00271 Helicase conserved C-terminal domain HM988_RS11845 PF03461 TRCF domain HM988_RS11845 PF02559 CarD-like/TRCF domain HM988_RS11845 PF17757 UvrB interaction domain HM988_RS11845 PF00270 DEAD/DEAH box helicase HM988_RS11855 PF01546 Peptidase family M20/M25/M40 HM988_RS11855 PF07687 Peptidase dimerisation domain HM988_RS11860 PF00582 Universal stress protein family HM988_RS11865 PF01180 Dihydroorotate dehydrogenase HM988_RS11875 PF00682 HMGL-like HM988_RS11910 PF00478 IMP dehydrogenase / GMP reductase domain HM988_RS11910 PF00571 CBS domain HM988_RS11920 PF01679 Proteolipid membrane potential modulator HM988_RS11930 PF01965 DJ-1/PfpI family HM988_RS11935 PF00270 DEAD/DEAH box helicase HM988_RS11935 PF17191 RecG wedge domain HM988_RS11935 PF00271 Helicase conserved C-terminal domain HM988_RS11940 PF11838 ERAP1-like C-terminal domain HM988_RS11940 PF01433 Peptidase family M1 domain HM988_RS11970 PF09312 SurA N-terminal domain HM988_RS11970 PF00639 PPIC-type PPIASE domain HM988_RS11980 PF09312 SurA N-terminal domain HM988_RS11985 PF17863 AAA lid domain HM988_RS11985 PF07726 ATPase family associated with various cellular activities (AAA) HM988_RS12005 PF12169 DNA polymerase III subunits gamma and tau domain III HM988_RS12035 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HM988_RS12035 PF14490 Helix-hairpin-helix containing domain HM988_RS12035 PF13538 UvrD-like helicase C-terminal domain HM988_RS12050 PF02348 Cytidylyltransferase HM988_RS12065 PF00465 Iron-containing alcohol dehydrogenase HM988_RS12085 PF01725 Ham1 family HM988_RS12100 PF02590 Predicted SPOUT methyltransferase HM988_RS12105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HM988_RS12105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HM988_RS12110 PF03631 Virulence factor BrkB HM988_RS12115 PF00072 Response regulator receiver domain HM988_RS12115 PF04397 LytTr DNA-binding domain HM988_RS12120 PF07694 5TMR of 5TMR-LYT HM988_RS12120 PF06580 Histidine kinase HM988_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS12155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HM988_RS12155 PF18074 Primosomal protein N C-terminal domain HM988_RS12155 PF04851 Type III restriction enzyme, res subunit HM988_RS12155 PF17764 3′ DNA-binding domain (3′BD) HM988_RS12155 PF00271 Helicase conserved C-terminal domain HM988_RS12160 PF04397 LytTr DNA-binding domain HM988_RS12160 PF00072 Response regulator receiver domain HM988_RS12165 PF01250 Ribosomal protein S6 HM988_RS12170 PF01084 Ribosomal protein S18 HM988_RS12175 PF03948 Ribosomal protein L9, C-terminal domain HM988_RS12175 PF01281 Ribosomal protein L9, N-terminal domain HM988_RS12180 PF03009 Glycerophosphoryl diester phosphodiesterase family HM988_RS12195 PF00005 ABC transporter HM988_RS12195 PF02687 FtsX-like permease family HM988_RS12195 PF12704 MacB-like periplasmic core domain HM988_RS12200 PF03129 Anticodon binding domain HM988_RS12200 PF13393 Histidyl-tRNA synthetase HM988_RS12205 PF02012 BNR/Asp-box repeat HM988_RS12205 PF13088 BNR repeat-like domain HM988_RS12205 PF02973 Sialidase, N-terminal domain HM988_RS12215 PF00801 PKD domain HM988_RS12215 PF05547 Immune inhibitor A peptidase M6 HM988_RS12225 PF00939 Sodium:sulfate symporter transmembrane region HM988_RS12240 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HM988_RS12240 PF12008 Type I restriction and modification enzyme - subunit R C terminal HM988_RS12240 PF18766 SWI2/SNF2 ATPase HM988_RS12245 PF02384 N-6 DNA Methylase HM988_RS12245 PF12161 HsdM N-terminal domain HM988_RS12250 PF01420 Type I restriction modification DNA specificity domain HM988_RS12270 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HM988_RS12270 PF17191 RecG wedge domain HM988_RS12270 PF00270 DEAD/DEAH box helicase HM988_RS12295 PF00733 Asparagine synthase HM988_RS12295 PF13537 Glutamine amidotransferase domain HM988_RS12315 PF03150 Di-haem cytochrome c peroxidase HM988_RS12315 PF00034 Cytochrome c HM988_RS12385 PF01063 Amino-transferase class IV HM988_RS12390 PF02622 Uncharacterized ACR, COG1678 HM988_RS12395 PF00216 Bacterial DNA-binding protein HM988_RS12400 PF02911 Formyl transferase, C-terminal domain HM988_RS12400 PF00551 Formyl transferase HM988_RS12405 PF00270 DEAD/DEAH box helicase HM988_RS12405 PF09382 RQC domain HM988_RS12405 PF00570 HRDC domain HM988_RS12405 PF00271 Helicase conserved C-terminal domain HM988_RS12405 PF16124 RecQ zinc-binding HM988_RS12425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HM988_RS12440 PF03441 FAD binding domain of DNA photolyase HM988_RS12440 PF00875 DNA photolyase HM988_RS12460 PF00255 Glutathione peroxidase HM988_RS12475 PF01227 GTP cyclohydrolase I HM988_RS12490 PF00875 DNA photolyase HM988_RS12490 PF03441 FAD binding domain of DNA photolyase HM988_RS12495 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HM988_RS12500 PF00875 DNA photolyase HM988_RS12500 PF03441 FAD binding domain of DNA photolyase HM988_RS12510 PF13460 NAD(P)H-binding HM988_RS12510 PF11066 Protein of unknown function (DUF2867) HM988_RS12520 PF03109 ABC1 family HM988_RS12535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HM988_RS12535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HM988_RS12565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HM988_RS12565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HM988_RS12580 PF13784 Fic/DOC family N-terminal HM988_RS12580 PF02661 Fic/DOC family HM988_RS12670 PF00330 Aconitase family (aconitate hydratase) HM988_RS12670 PF00694 Aconitase C-terminal domain HM988_RS12685 PF00578 AhpC/TSA family HM988_RS12700 PF01593 Flavin containing amine oxidoreductase HM988_RS12720 PF01202 Shikimate kinase HM988_RS12725 PF00156 Phosphoribosyl transferase domain HM988_RS12735 PF01479 S4 domain HM988_RS12750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HM988_RS12750 PF02780 Transketolase, C-terminal domain HM988_RS12750 PF02779 Transketolase, pyrimidine binding domain HM988_RS12755 PF00456 Transketolase, thiamine diphosphate binding domain HM988_RS12760 PF01702 Queuine tRNA-ribosyltransferase HM988_RS12775 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HM988_RS12780 PF03796 DnaB-like helicase C terminal domain HM988_RS12780 PF00772 DnaB-like helicase N terminal domain HM988_RS12785 PF01594 AI-2E family transporter HM988_RS12790 PF01063 Amino-transferase class IV HM988_RS12815 PF01894 Uncharacterised protein family UPF0047 HM988_RS12825 PF00453 Ribosomal protein L20 HM988_RS12830 PF01632 Ribosomal protein L35 HM988_RS12835 PF00707 Translation initiation factor IF-3, C-terminal domain HM988_RS12835 PF05198 Translation initiation factor IF-3, N-terminal domain HM988_RS12840 PF03129 Anticodon binding domain HM988_RS12840 PF02824 TGS domain HM988_RS12840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HM988_RS12840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HM988_RS12870 PF00849 RNA pseudouridylate synthase HM988_RS12875 PF02548 Ketopantoate hydroxymethyltransferase HM988_RS12880 PF03313 Serine dehydratase alpha chain HM988_RS12880 PF03315 Serine dehydratase beta chain HM988_RS12895 PF00012 Hsp70 protein HM988_RS12900 PF00221 Aromatic amino acid lyase HM988_RS12915 PF13802 Galactose mutarotase-like HM988_RS12915 PF17137 Domain of unknown function (DUF5110) HM988_RS12915 PF01055 Glycosyl hydrolases family 31 HM988_RS12915 PF16338 Domain of unknown function (DUF4968) HM988_RS12955 PF05362 Lon protease (S16) C-terminal proteolytic domain HM988_RS12955 PF00004 ATPase family associated with various cellular activities (AAA) HM988_RS12955 PF02190 ATP-dependent protease La (LON) substrate-binding domain HM988_RS12960 PF00877 NlpC/P60 family HM988_RS12960 PF01476 LysM domain HM988_RS12970 PF02224 Cytidylate kinase HM988_RS12980 PF00575 S1 RNA binding domain HM988_RS12985 PF00156 Phosphoribosyl transferase domain HM988_RS12990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HM988_RS12990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HM988_RS13000 PF12706 Beta-lactamase superfamily domain HM988_RS13005 PF01243 Pyridoxamine 5'-phosphate oxidase HM988_RS13005 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HM988_RS13010 PF00188 Cysteine-rich secretory protein family HM988_RS13030 PF00691 OmpA family HM988_RS13050 PF13090 Polyphosphate kinase C-terminal domain 2 HM988_RS13050 PF17941 Polyphosphate kinase C-terminal domain 1 HM988_RS13050 PF02503 Polyphosphate kinase middle domain HM988_RS13050 PF13089 Polyphosphate kinase N-terminal domain HM988_RS13065 PF04389 Peptidase family M28 HM988_RS13065 PF02225 PA domain HM988_RS13070 PF04389 Peptidase family M28 HM988_RS13070 PF01483 Proprotein convertase P-domain HM988_RS13105 PF00403 Heavy-metal-associated domain HM988_RS13125 PF13426 PAS domain HM988_RS13125 PF01740 STAS domain HM988_RS13130 PF00486 Transcriptional regulatory protein, C terminal HM988_RS13130 PF00072 Response regulator receiver domain HM988_RS13150 PF00582 Universal stress protein family HM988_RS13170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HM988_RS13170 PF00753 Metallo-beta-lactamase superfamily HM988_RS13170 PF10996 Beta-Casp domain HM988_RS13185 PF00582 Universal stress protein family HM988_RS13205 PF10365 Domain of unknown function (DUF2436) HM988_RS13205 PF07675 Cleaved Adhesin Domain HM988_RS13215 PF00223 Photosystem I psaA/psaB protein HM988_RS13215 PF00691 OmpA family HM988_RS13230 PF03971 Monomeric isocitrate dehydrogenase HM988_RS13240 PF01245 Ribosomal protein L19 HM988_RS13245 PF01746 tRNA (Guanine-1)-methyltransferase HM988_RS13250 PF10437 Bacterial lipoate protein ligase C-terminus HM988_RS13250 PF03099 Biotin/lipoate A/B protein ligase family HM988_RS13255 PF12697 Alpha/beta hydrolase family HM988_RS13270 PF01432 Peptidase family M3 HM988_RS13275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HM988_RS13280 PF00293 NUDIX domain HM988_RS13300 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS13315 PF13302 Acetyltransferase (GNAT) domain HM988_RS13325 PF01758 Sodium Bile acid symporter family HM988_RS13355 PF14821 Threonine synthase N terminus HM988_RS13355 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS13365 PF08544 GHMP kinases C terminal HM988_RS13365 PF00288 GHMP kinases N terminal domain HM988_RS13370 PF00742 Homoserine dehydrogenase HM988_RS13370 PF01842 ACT domain HM988_RS13370 PF00696 Amino acid kinase family HM988_RS13370 PF13840 ACT domain HM988_RS13370 PF03447 Homoserine dehydrogenase, NAD binding domain HM988_RS13375 PF01256 Carbohydrate kinase HM988_RS13380 PF00578 AhpC/TSA family HM988_RS13385 PF10672 S-adenosylmethionine-dependent methyltransferase HM988_RS13385 PF17785 PUA-like domain HM988_RS13390 PF03060 Nitronate monooxygenase HM988_RS13440 PF03061 Thioesterase superfamily HM988_RS13445 PF00425 chorismate binding enzyme HM988_RS13450 PF07676 WD40-like Beta Propeller Repeat HM988_RS13450 PF03572 Peptidase family S41 HM988_RS13450 PF14684 Tricorn protease C1 domain HM988_RS13450 PF14685 Tricorn protease PDZ domain HM988_RS13455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HM988_RS13455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HM988_RS13465 PF17783 CvfB-like winged helix domain HM988_RS13465 PF13509 S1 domain HM988_RS13475 PF00378 Enoyl-CoA hydratase/isomerase HM988_RS13480 PF01040 UbiA prenyltransferase family HM988_RS13500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HM988_RS13500 PF13378 Enolase C-terminal domain-like HM988_RS13510 PF13193 AMP-binding enzyme C-terminal domain HM988_RS13510 PF00501 AMP-binding enzyme HM988_RS13515 PF12450 von Willebrand factor HM988_RS13515 PF12034 Domain of unknown function (DUF3520) HM988_RS13515 PF00092 von Willebrand factor type A domain HM988_RS13530 PF06071 Protein of unknown function (DUF933) HM988_RS13530 PF01926 50S ribosome-binding GTPase HM988_RS13540 PF00892 EamA-like transporter family HM988_RS13550 PF01751 Toprim domain HM988_RS13550 PF00204 DNA gyrase B HM988_RS13550 PF00986 DNA gyrase B subunit, carboxyl terminus HM988_RS13550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS13560 PF00521 DNA gyrase/topoisomerase IV, subunit A HM988_RS13570 PF03062 MBOAT, membrane-bound O-acyltransferase family HM988_RS13575 PF03741 Integral membrane protein TerC family HM988_RS13595 PF01037 Lrp/AsnC ligand binding domain HM988_RS13595 PF13404 AsnC-type helix-turn-helix domain HM988_RS13605 PF01761 3-dehydroquinate synthase HM988_RS13610 PF01619 Proline dehydrogenase HM988_RS13615 PF13807 G-rich domain on putative tyrosine kinase HM988_RS13615 PF02706 Chain length determinant protein HM988_RS13615 PF13614 AAA domain HM988_RS13625 PF02719 Polysaccharide biosynthesis protein HM988_RS13630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HM988_RS13645 PF02397 Bacterial sugar transferase HM988_RS13655 PF00733 Asparagine synthase HM988_RS13655 PF13537 Glutamine amidotransferase domain HM988_RS13660 PF00534 Glycosyl transferases group 1 HM988_RS13660 PF13439 Glycosyltransferase Family 4 HM988_RS13675 PF00535 Glycosyl transferase family 2 HM988_RS13685 PF00534 Glycosyl transferases group 1 HM988_RS13695 PF00535 Glycosyl transferase family 2 HM988_RS13700 PF02368 Bacterial Ig-like domain (group 2) HM988_RS13710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HM988_RS13710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HM988_RS13710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HM988_RS13715 PF01370 NAD dependent epimerase/dehydratase family HM988_RS13725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HM988_RS13725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HM988_RS13740 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HM988_RS13745 PF00072 Response regulator receiver domain HM988_RS13745 PF00158 Sigma-54 interaction domain HM988_RS13745 PF02954 Bacterial regulatory protein, Fis family HM988_RS13750 PF01966 HD domain HM988_RS13755 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HM988_RS13755 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS13760 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HM988_RS13760 PF07977 FabA-like domain HM988_RS13765 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS13765 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HM988_RS13770 PF08207 Elongation factor P (EF-P) KOW-like domain HM988_RS13770 PF09285 Elongation factor P, C-terminal HM988_RS13770 PF01132 Elongation factor P (EF-P) OB domain HM988_RS13775 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HM988_RS13775 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS13785 PF02629 CoA binding domain HM988_RS13785 PF00549 CoA-ligase HM988_RS13790 PF05193 Peptidase M16 inactive domain HM988_RS13790 PF00675 Insulinase (Peptidase family M16) HM988_RS13820 PF01416 tRNA pseudouridine synthase HM988_RS13835 PF00210 Ferritin-like domain HM988_RS13840 PF00924 Mechanosensitive ion channel HM988_RS13840 PF05552 Conserved TM helix HM988_RS13870 PF00924 Mechanosensitive ion channel HM988_RS13875 PF12823 Domain of unknown function (DUF3817) HM988_RS13880 PF00313 'Cold-shock' DNA-binding domain HM988_RS13885 PF02469 Fasciclin domain HM988_RS13895 PF01751 Toprim domain HM988_RS13895 PF01131 DNA topoisomerase HM988_RS13900 PF01551 Peptidase family M23 HM988_RS13900 PF01476 LysM domain HM988_RS13920 PF00226 DnaJ domain HM988_RS13920 PF07743 HSCB C-terminal oligomerisation domain HM988_RS13940 PF00271 Helicase conserved C-terminal domain HM988_RS13940 PF00270 DEAD/DEAH box helicase HM988_RS13945 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS13945 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HM988_RS13955 PF00313 'Cold-shock' DNA-binding domain HM988_RS13975 PF00211 Adenylate and Guanylate cyclase catalytic domain HM988_RS13980 PF00171 Aldehyde dehydrogenase family HM988_RS13985 PF00106 short chain dehydrogenase HM988_RS13995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HM988_RS14020 PF13361 UvrD-like helicase C-terminal domain HM988_RS14020 PF00580 UvrD/REP helicase N-terminal domain HM988_RS14040 PF01590 GAF domain HM988_RS14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS14040 PF00360 Phytochrome region HM988_RS14040 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS14040 PF08446 PAS fold HM988_RS14055 PF01272 Transcription elongation factor, GreA/GreB, C-term HM988_RS14055 PF03449 Transcription elongation factor, N-terminal HM988_RS14060 PF04116 Fatty acid hydroxylase superfamily HM988_RS14070 PF02586 SOS response associated peptidase (SRAP) HM988_RS14080 PF01272 Transcription elongation factor, GreA/GreB, C-term HM988_RS14080 PF14760 Rnk N-terminus HM988_RS14085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HM988_RS14085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HM988_RS14095 PF02954 Bacterial regulatory protein, Fis family HM988_RS14095 PF00158 Sigma-54 interaction domain HM988_RS14095 PF00072 Response regulator receiver domain HM988_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS14100 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS14100 PF13188 PAS domain HM988_RS14100 PF00072 Response regulator receiver domain HM988_RS14100 PF08448 PAS fold HM988_RS14105 PF06965 Na+/H+ antiporter 1 HM988_RS14120 PF02517 CPBP intramembrane metalloprotease HM988_RS14130 PF00072 Response regulator receiver domain HM988_RS14130 PF04397 LytTr DNA-binding domain HM988_RS14135 PF07694 5TMR of 5TMR-LYT HM988_RS14135 PF06580 Histidine kinase HM988_RS14150 PF00005 ABC transporter HM988_RS14150 PF13732 Domain of unknown function (DUF4162) HM988_RS14155 PF07694 5TMR of 5TMR-LYT HM988_RS14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS14155 PF06580 Histidine kinase HM988_RS14160 PF00072 Response regulator receiver domain HM988_RS14160 PF04397 LytTr DNA-binding domain HM988_RS14165 PF16353 Domain of unknown function(DUF4981) HM988_RS14165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HM988_RS14165 PF02837 Glycosyl hydrolases family 2, sugar binding domain HM988_RS14165 PF02929 Beta galactosidase small chain HM988_RS14165 PF00703 Glycosyl hydrolases family 2 HM988_RS14170 PF02469 Fasciclin domain HM988_RS14175 PF00175 Oxidoreductase NAD-binding domain HM988_RS14175 PF00970 Oxidoreductase FAD-binding domain HM988_RS14175 PF00111 2Fe-2S iron-sulfur cluster binding domain HM988_RS14185 PF00144 Beta-lactamase HM988_RS14195 PF00296 Luciferase-like monooxygenase HM988_RS14200 PF03449 Transcription elongation factor, N-terminal HM988_RS14200 PF01272 Transcription elongation factor, GreA/GreB, C-term HM988_RS14205 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HM988_RS14225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HM988_RS14225 PF02770 Acyl-CoA dehydrogenase, middle domain HM988_RS14225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HM988_RS14245 PF16884 N-terminal domain of oxidoreductase HM988_RS14245 PF00107 Zinc-binding dehydrogenase HM988_RS14280 PF00072 Response regulator receiver domain HM988_RS14280 PF04397 LytTr DNA-binding domain HM988_RS14285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS14285 PF06580 Histidine kinase HM988_RS14295 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HM988_RS14300 PF04960 Glutaminase HM988_RS14310 PF04168 A predicted alpha-helical domain with a conserved ER motif. HM988_RS14310 PF14403 Circularly permuted ATP-grasp type 2 HM988_RS14315 PF01841 Transglutaminase-like superfamily HM988_RS14315 PF08379 Bacterial transglutaminase-like N-terminal region HM988_RS14320 PF10005 zinc-ribbon domain HM988_RS14320 PF15887 Putative zinc-binding metallo-peptidase HM988_RS14335 PF14403 Circularly permuted ATP-grasp type 2 HM988_RS14340 PF03928 Haem-degrading HM988_RS14345 PF08459 UvrC Helix-hairpin-helix N-terminal HM988_RS14345 PF01541 GIY-YIG catalytic domain HM988_RS14345 PF02151 UvrB/uvrC motif HM988_RS14350 PF05532 CsbD-like HM988_RS14355 PF00313 'Cold-shock' DNA-binding domain HM988_RS14365 PF00005 ABC transporter HM988_RS14370 PF13472 GDSL-like Lipase/Acylhydrolase family HM988_RS14385 PF05552 Conserved TM helix HM988_RS14385 PF00924 Mechanosensitive ion channel HM988_RS14390 PF01734 Patatin-like phospholipase HM988_RS14445 PF00561 alpha/beta hydrolase fold HM988_RS14460 PF07995 Glucose / Sorbosone dehydrogenase HM988_RS14480 PF00849 RNA pseudouridylate synthase HM988_RS14490 PF00581 Rhodanese-like domain HM988_RS14495 PF00375 Sodium:dicarboxylate symporter family HM988_RS14505 PF01264 Chorismate synthase HM988_RS14515 PF01381 Helix-turn-helix HM988_RS14525 PF02913 FAD linked oxidases, C-terminal domain HM988_RS14525 PF01565 FAD binding domain HM988_RS14525 PF13183 4Fe-4S dicluster domain HM988_RS14560 PF16242 Pyridoxamine 5'-phosphate oxidase like HM988_RS14575 PF04239 Protein of unknown function (DUF421) HM988_RS14580 PF08669 Glycine cleavage T-protein C-terminal barrel domain HM988_RS14580 PF01571 Aminomethyltransferase folate-binding domain HM988_RS14590 PF01329 Pterin 4 alpha carbinolamine dehydratase HM988_RS14595 PF01709 Transcriptional regulator HM988_RS14605 PF00589 Phage integrase family HM988_RS14605 PF02899 Phage integrase, N-terminal SAM-like domain HM988_RS14620 PF00665 Integrase core domain HM988_RS14620 PF13333 Integrase core domain HM988_RS14620 PF13276 HTH-like domain HM988_RS14705 PF02384 N-6 DNA Methylase HM988_RS14710 PF01420 Type I restriction modification DNA specificity domain HM988_RS14730 PF00004 ATPase family associated with various cellular activities (AAA) HM988_RS14730 PF17862 AAA+ lid domain HM988_RS14730 PF01434 Peptidase family M41 HM988_RS14730 PF06480 FtsH Extracellular HM988_RS14850 PF07687 Peptidase dimerisation domain HM988_RS14850 PF01546 Peptidase family M20/M25/M40 HM988_RS14855 PF01053 Cys/Met metabolism PLP-dependent enzyme HM988_RS14880 PF03483 B3/4 domain HM988_RS14880 PF03147 Ferredoxin-fold anticodon binding domain HM988_RS14880 PF01588 Putative tRNA binding domain HM988_RS14880 PF03484 tRNA synthetase B5 domain HM988_RS14880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HM988_RS14890 PF08534 Redoxin HM988_RS14905 PF01580 FtsK/SpoIIIE family HM988_RS14905 PF09397 Ftsk gamma domain HM988_RS14905 PF17854 FtsK alpha domain HM988_RS14905 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HM988_RS14920 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HM988_RS14920 PF00925 GTP cyclohydrolase II HM988_RS14925 PF00722 Glycosyl hydrolases family 16 HM988_RS14965 PF01389 OmpA-like transmembrane domain HM988_RS14965 PF00691 OmpA family HM988_RS15005 PF00072 Response regulator receiver domain HM988_RS15005 PF07495 Y_Y_Y domain HM988_RS15005 PF07494 Two component regulator propeller HM988_RS15005 PF12833 Helix-turn-helix domain HM988_RS15005 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS15010 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS15010 PF07495 Y_Y_Y domain HM988_RS15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS15010 PF00072 Response regulator receiver domain HM988_RS15010 PF12833 Helix-turn-helix domain HM988_RS15010 PF07494 Two component regulator propeller HM988_RS15015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HM988_RS15020 PF00881 Nitroreductase family HM988_RS15030 PF13580 SIS domain HM988_RS15050 PF02626 Carboxyltransferase domain, subdomain A and B HM988_RS15055 PF02682 Carboxyltransferase domain, subdomain C and D HM988_RS15060 PF03746 LamB/YcsF family HM988_RS15090 PF01078 Magnesium chelatase, subunit ChlI HM988_RS15090 PF13335 Magnesium chelatase, subunit ChlI C-terminal HM988_RS15095 PF00384 Molybdopterin oxidoreductase HM988_RS15095 PF01568 Molydopterin dinucleotide binding domain HM988_RS15120 PF00561 alpha/beta hydrolase fold HM988_RS15125 PF01979 Amidohydrolase family HM988_RS15125 PF13382 Adenine deaminase C-terminal domain HM988_RS15130 PF01171 PP-loop family HM988_RS15140 PF04715 Anthranilate synthase component I, N terminal region HM988_RS15140 PF00425 chorismate binding enzyme HM988_RS15150 PF00270 DEAD/DEAH box helicase HM988_RS15150 PF00271 Helicase conserved C-terminal domain HM988_RS15165 PF08281 Sigma-70, region 4 HM988_RS15165 PF04542 Sigma-70 region 2 HM988_RS15180 PF06580 Histidine kinase HM988_RS15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS15180 PF13492 GAF domain HM988_RS15180 PF07694 5TMR of 5TMR-LYT HM988_RS15185 PF04397 LytTr DNA-binding domain HM988_RS15185 PF00072 Response regulator receiver domain HM988_RS15195 PF07055 Enoyl reductase FAD binding domain HM988_RS15195 PF12241 Trans-2-enoyl-CoA reductase catalytic region HM988_RS15195 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HM988_RS15200 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS15200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HM988_RS15205 PF00196 Bacterial regulatory proteins, luxR family HM988_RS15205 PF00072 Response regulator receiver domain HM988_RS15210 PF01037 Lrp/AsnC ligand binding domain HM988_RS15215 PF01053 Cys/Met metabolism PLP-dependent enzyme HM988_RS15225 PF03553 Na+/H+ antiporter family HM988_RS15230 PF10417 C-terminal domain of 1-Cys peroxiredoxin HM988_RS15230 PF00578 AhpC/TSA family HM988_RS15235 PF00085 Thioredoxin HM988_RS15245 PF00141 Peroxidase HM988_RS15260 PF00005 ABC transporter HM988_RS15260 PF12848 ABC transporter HM988_RS15270 PF00923 Transaldolase/Fructose-6-phosphate aldolase HM988_RS15280 PF00106 short chain dehydrogenase HM988_RS15315 PF00464 Serine hydroxymethyltransferase HM988_RS15325 PF00849 RNA pseudouridylate synthase HM988_RS15350 PF17871 AAA lid domain HM988_RS15350 PF02861 Clp amino terminal domain, pathogenicity island component HM988_RS15350 PF07724 AAA domain (Cdc48 subfamily) HM988_RS15350 PF10431 C-terminal, D2-small domain, of ClpB protein HM988_RS15350 PF00004 ATPase family associated with various cellular activities (AAA) HM988_RS15360 PF01791 DeoC/LacD family aldolase HM988_RS15365 PF01048 Phosphorylase superfamily HM988_RS15380 PF01668 SmpB protein HM988_RS15400 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain HM988_RS15400 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HM988_RS15410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HM988_RS15410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HM988_RS15415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HM988_RS15415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HM988_RS15430 PF01168 Alanine racemase, N-terminal domain HM988_RS15435 PF11490 DNA polymerase III polC-type N-terminus II HM988_RS15435 PF07733 Bacterial DNA polymerase III alpha NTPase domain HM988_RS15435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HM988_RS15435 PF02811 PHP domain HM988_RS15435 PF00929 Exonuclease HM988_RS15435 PF14579 Helix-hairpin-helix motif HM988_RS15445 PF00027 Cyclic nucleotide-binding domain HM988_RS15445 PF00520 Ion transport protein HM988_RS15460 PF00486 Transcriptional regulatory protein, C terminal HM988_RS15460 PF00072 Response regulator receiver domain HM988_RS15465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS15465 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS15470 PF01121 Dephospho-CoA kinase HM988_RS15480 PF00535 Glycosyl transferase family 2 HM988_RS15480 PF02709 N-terminal domain of galactosyltransferase HM988_RS15495 PF13476 AAA domain HM988_RS15505 PF02441 Flavoprotein HM988_RS15505 PF04127 DNA / pantothenate metabolism flavoprotein HM988_RS15520 PF00701 Dihydrodipicolinate synthetase family HM988_RS15535 PF00149 Calcineurin-like phosphoesterase HM988_RS15535 PF02872 5'-nucleotidase, C-terminal domain HM988_RS15545 PF03120 NAD-dependent DNA ligase OB-fold domain HM988_RS15545 PF12826 Helix-hairpin-helix motif HM988_RS15545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HM988_RS15545 PF00533 BRCA1 C Terminus (BRCT) domain HM988_RS15545 PF01653 NAD-dependent DNA ligase adenylation domain HM988_RS15550 PF17827 PrmC N-terminal domain HM988_RS15550 PF05175 Methyltransferase small domain HM988_RS15555 PF00583 Acetyltransferase (GNAT) family HM988_RS15565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HM988_RS15565 PF01872 RibD C-terminal domain HM988_RS15570 PF13419 Haloacid dehalogenase-like hydrolase HM988_RS15585 PF01205 Uncharacterized protein family UPF0029 HM988_RS15585 PF09186 Domain of unknown function (DUF1949) HM988_RS15590 PF03061 Thioesterase superfamily HM988_RS15595 PF00308 Bacterial dnaA protein HM988_RS15595 PF11638 DnaA N-terminal domain HM988_RS15595 PF08299 Bacterial dnaA protein helix-turn-helix HM988_RS15600 PF01451 Low molecular weight phosphotyrosine protein phosphatase HM988_RS15610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HM988_RS15625 PF02618 YceG-like family HM988_RS15635 PF01678 Diaminopimelate epimerase HM988_RS15640 PF17820 PDZ domain HM988_RS15640 PF13180 PDZ domain HM988_RS15645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HM988_RS15645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HM988_RS15755 PF02371 Transposase IS116/IS110/IS902 family HM988_RS15755 PF01548 Transposase HM988_RS15805 PF12161 HsdM N-terminal domain HM988_RS15805 PF02384 N-6 DNA Methylase HM988_RS15860 PF08279 HTH domain HM988_RS15860 PF13280 WYL domain HM988_RS15870 PF00037 4Fe-4S binding domain HM988_RS15880 PF00266 Aminotransferase class-V HM988_RS15885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HM988_RS15885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HM988_RS15925 PF00005 ABC transporter HM988_RS15940 PF00756 Putative esterase HM988_RS15940 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase HM988_RS15945 PF00883 Cytosol aminopeptidase family, catalytic domain HM988_RS15945 PF02789 Cytosol aminopeptidase family, N-terminal domain HM988_RS15965 PF04107 Glutamate-cysteine ligase family 2(GCS2) HM988_RS15980 PF00657 GDSL-like Lipase/Acylhydrolase HM988_RS15985 PF10415 Fumarase C C-terminus HM988_RS15985 PF00206 Lyase HM988_RS15995 PF01979 Amidohydrolase family HM988_RS16005 PF00491 Arginase family HM988_RS16045 PF00293 NUDIX domain HM988_RS16075 PF12848 ABC transporter HM988_RS16075 PF00005 ABC transporter HM988_RS16085 PF02678 Pirin HM988_RS16085 PF17954 Quercetinase C-terminal cupin domain HM988_RS16105 PF01039 Carboxyl transferase domain HM988_RS16130 PF02142 MGS-like domain HM988_RS16140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HM988_RS16140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HM988_RS16145 PF00365 Phosphofructokinase HM988_RS16155 PF00814 Glycoprotease family HM988_RS16185 PF01594 AI-2E family transporter HM988_RS16205 PF04675 DNA ligase N terminus HM988_RS16205 PF01068 ATP dependent DNA ligase domain HM988_RS16205 PF04679 ATP dependent DNA ligase C terminal region HM988_RS16235 PF00360 Phytochrome region HM988_RS16235 PF08446 PAS fold HM988_RS16235 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS16235 PF01590 GAF domain HM988_RS16240 PF08446 PAS fold HM988_RS16240 PF00360 Phytochrome region HM988_RS16240 PF01590 GAF domain HM988_RS16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS16240 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS16245 PF00072 Response regulator receiver domain HM988_RS16250 PF00072 Response regulator receiver domain HM988_RS16250 PF00486 Transcriptional regulatory protein, C terminal HM988_RS16255 PF00072 Response regulator receiver domain HM988_RS16255 PF01339 CheB methylesterase HM988_RS16260 PF07697 7TM-HD extracellular HM988_RS16260 PF07698 7TM receptor with intracellular HD hydrolase HM988_RS16260 PF01966 HD domain HM988_RS16265 PF02803 Thiolase, C-terminal domain HM988_RS16265 PF00108 Thiolase, N-terminal domain HM988_RS16270 PF00877 NlpC/P60 family HM988_RS16280 PF00521 DNA gyrase/topoisomerase IV, subunit A HM988_RS16280 PF03989 DNA gyrase C-terminal domain, beta-propeller HM988_RS16285 PF00004 ATPase family associated with various cellular activities (AAA) HM988_RS16285 PF07724 AAA domain (Cdc48 subfamily) HM988_RS16285 PF17871 AAA lid domain HM988_RS16285 PF02861 Clp amino terminal domain, pathogenicity island component HM988_RS16285 PF10431 C-terminal, D2-small domain, of ClpB protein HM988_RS16295 PF00128 Alpha amylase, catalytic domain HM988_RS16295 PF02806 Alpha amylase, C-terminal all-beta domain HM988_RS16295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HM988_RS16300 PF01636 Phosphotransferase enzyme family HM988_RS16300 PF18085 Maltokinase N-terminal cap domain HM988_RS16305 PF00128 Alpha amylase, catalytic domain HM988_RS16305 PF11896 Domain of unknown function (DUF3416) HM988_RS16310 PF00723 Glycosyl hydrolases family 15 HM988_RS16315 PF00982 Glycosyltransferase family 20 HM988_RS16320 PF00483 Nucleotidyl transferase HM988_RS16325 PF13439 Glycosyltransferase Family 4 HM988_RS16325 PF00534 Glycosyl transferases group 1 HM988_RS16330 PF01641 SelR domain HM988_RS16350 PF07992 Pyridine nucleotide-disulphide oxidoreductase HM988_RS16350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HM988_RS16360 PF01220 Dehydroquinase class II HM988_RS16375 PF00589 Phage integrase family HM988_RS16375 PF02899 Phage integrase, N-terminal SAM-like domain HM988_RS16395 PF01966 HD domain HM988_RS16395 PF00013 KH domain HM988_RS16395 PF12072 Domain of unknown function (DUF3552) HM988_RS16430 PF00266 Aminotransferase class-V HM988_RS16460 PF00202 Aminotransferase class-III HM988_RS16475 PF05958 tRNA (Uracil-5-)-methyltransferase HM988_RS16475 PF01938 TRAM domain HM988_RS16495 PF01259 SAICAR synthetase HM988_RS16500 PF02562 PhoH-like protein HM988_RS16530 PF00712 DNA polymerase III beta subunit, N-terminal domain HM988_RS16530 PF02767 DNA polymerase III beta subunit, central domain HM988_RS16530 PF02768 DNA polymerase III beta subunit, C-terminal domain HM988_RS16555 PF02322 Cytochrome bd terminal oxidase subunit II HM988_RS16560 PF01654 Cytochrome bd terminal oxidase subunit I HM988_RS16565 PF00085 Thioredoxin HM988_RS16585 PF03600 Citrate transporter HM988_RS16585 PF02080 TrkA-C domain HM988_RS16625 PF01068 ATP dependent DNA ligase domain HM988_RS16625 PF13298 DNA polymerase Ligase (LigD) HM988_RS16625 PF04679 ATP dependent DNA ligase C terminal region HM988_RS16630 PF02735 Ku70/Ku80 beta-barrel domain HM988_RS16635 PF00199 Catalase HM988_RS16635 PF06628 Catalase-related immune-responsive HM988_RS16635 PF18011 C-terminal domain found in long catalases HM988_RS16640 PF02308 MgtC family HM988_RS16665 PF02151 UvrB/uvrC motif HM988_RS16665 PF08459 UvrC Helix-hairpin-helix N-terminal HM988_RS16665 PF01541 GIY-YIG catalytic domain HM988_RS16685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HM988_RS16685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HM988_RS16700 PF12631 MnmE helical domain HM988_RS16700 PF01926 50S ribosome-binding GTPase HM988_RS16700 PF10396 GTP-binding protein TrmE N-terminus HM988_RS16705 PF08534 Redoxin HM988_RS16725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HM988_RS16725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HM988_RS16725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HM988_RS16725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HM988_RS16755 PF01029 NusB family HM988_RS16755 PF01189 16S rRNA methyltransferase RsmB/F HM988_RS16760 PF00704 Glycosyl hydrolases family 18 HM988_RS16760 PF00041 Fibronectin type III domain HM988_RS16765 PF02769 AIR synthase related protein, C-terminal domain HM988_RS16765 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HM988_RS16765 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HM988_RS16770 PF00501 AMP-binding enzyme HM988_RS16780 PF01047 MarR family HM988_RS16785 PF00378 Enoyl-CoA hydratase/isomerase HM988_RS16785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HM988_RS16785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HM988_RS16790 PF00108 Thiolase, N-terminal domain HM988_RS16790 PF02803 Thiolase, C-terminal domain HM988_RS16800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HM988_RS16800 PF02770 Acyl-CoA dehydrogenase, middle domain HM988_RS16800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HM988_RS16805 PF01520 N-acetylmuramoyl-L-alanine amidase HM988_RS16835 PF04389 Peptidase family M28 HM988_RS16840 PF01551 Peptidase family M23 HM988_RS16870 PF00326 Prolyl oligopeptidase family HM988_RS16890 PF00403 Heavy-metal-associated domain HM988_RS16900 PF00115 Cytochrome C and Quinol oxidase polypeptide I HM988_RS16910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HM988_RS16910 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HM988_RS16915 PF13746 4Fe-4S dicluster domain HM988_RS16915 PF12801 4Fe-4S binding domain HM988_RS16915 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HM988_RS16940 PF00582 Universal stress protein family HM988_RS16945 PF04055 Radical SAM superfamily HM988_RS16945 PF06969 HemN C-terminal domain HM988_RS16950 PF00080 Copper/zinc superoxide dismutase (SODC) HM988_RS16965 PF03006 Haemolysin-III related HM988_RS16975 PF05343 M42 glutamyl aminopeptidase HM988_RS16985 PF13367 PrsW family intramembrane metalloprotease HM988_RS16995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HM988_RS16995 PF00289 Biotin carboxylase, N-terminal domain HM988_RS16995 PF02785 Biotin carboxylase C-terminal domain HM988_RS17000 PF01039 Carboxyl transferase domain HM988_RS17005 PF00664 ABC transporter transmembrane region HM988_RS17005 PF00005 ABC transporter HM988_RS17015 PF07690 Major Facilitator Superfamily HM988_RS17020 PF01300 Telomere recombination HM988_RS17040 PF00580 UvrD/REP helicase N-terminal domain HM988_RS17040 PF13361 UvrD-like helicase C-terminal domain HM988_RS17055 PF00534 Glycosyl transferases group 1 HM988_RS17055 PF13439 Glycosyltransferase Family 4 HM988_RS17060 PF00933 Glycosyl hydrolase family 3 N terminal domain HM988_RS17060 PF01915 Glycosyl hydrolase family 3 C-terminal domain HM988_RS17085 PF02754 Cysteine-rich domain HM988_RS17085 PF02665 Nitrate reductase gamma subunit HM988_RS17085 PF13183 4Fe-4S dicluster domain HM988_RS17090 PF13183 4Fe-4S dicluster domain HM988_RS17090 PF02754 Cysteine-rich domain HM988_RS17100 PF01520 N-acetylmuramoyl-L-alanine amidase HM988_RS17110 PF01042 Endoribonuclease L-PSP HM988_RS17115 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HM988_RS17125 PF00478 IMP dehydrogenase / GMP reductase domain HM988_RS17150 PF00360 Phytochrome region HM988_RS17150 PF08446 PAS fold HM988_RS17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS17150 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS17150 PF01590 GAF domain HM988_RS17160 PF00535 Glycosyl transferase family 2 HM988_RS17170 PF01979 Amidohydrolase family HM988_RS17215 PF00578 AhpC/TSA family HM988_RS17220 PF00633 Helix-hairpin-helix motif HM988_RS17220 PF00730 HhH-GPD superfamily base excision DNA repair protein HM988_RS17220 PF10576 Iron-sulfur binding domain of endonuclease III HM988_RS17235 PF17760 UvrA interaction domain HM988_RS17235 PF17755 UvrA DNA-binding domain HM988_RS17300 PF00155 Aminotransferase class I and II HM988_RS17305 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS17305 PF00571 CBS domain HM988_RS17310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HM988_RS17310 PF00326 Prolyl oligopeptidase family HM988_RS17315 PF02575 YbaB/EbfC DNA-binding family HM988_RS17320 PF01212 Beta-eliminating lyase HM988_RS17330 PF03960 ArsC family HM988_RS17340 PF00593 TonB dependent receptor HM988_RS17340 PF07715 TonB-dependent Receptor Plug Domain HM988_RS17350 PF00107 Zinc-binding dehydrogenase HM988_RS17350 PF08240 Alcohol dehydrogenase GroES-like domain HM988_RS17355 PF00144 Beta-lactamase HM988_RS17360 PF13419 Haloacid dehalogenase-like hydrolase HM988_RS17370 PF13193 AMP-binding enzyme C-terminal domain HM988_RS17370 PF16177 Acetyl-coenzyme A synthetase N-terminus HM988_RS17370 PF00501 AMP-binding enzyme HM988_RS17380 PF00171 Aldehyde dehydrogenase family HM988_RS17390 PF00474 Sodium:solute symporter family HM988_RS17400 PF01235 Sodium:alanine symporter family HM988_RS17405 PF03880 DbpA RNA binding domain HM988_RS17405 PF00270 DEAD/DEAH box helicase HM988_RS17405 PF00271 Helicase conserved C-terminal domain HM988_RS17415 PF00588 SpoU rRNA Methylase family HM988_RS17415 PF08032 RNA 2'-O ribose methyltransferase substrate binding HM988_RS17440 PF02146 Sir2 family HM988_RS17465 PF00005 ABC transporter HM988_RS17470 PF01032 FecCD transport family HM988_RS17480 PF00593 TonB dependent receptor HM988_RS17480 PF07715 TonB-dependent Receptor Plug Domain HM988_RS17500 PF13240 zinc-ribbon domain HM988_RS17515 PF00206 Lyase HM988_RS17515 PF08328 Adenylosuccinate lyase C-terminal HM988_RS17520 PF02646 RmuC family HM988_RS17545 PF02142 MGS-like domain HM988_RS17545 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HM988_RS17545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HM988_RS17550 PF00468 Ribosomal protein L34 HM988_RS17560 PF13396 Phospholipase_D-nuclease N-terminal HM988_RS17560 PF13091 PLD-like domain HM988_RS17585 PF00919 Uncharacterized protein family UPF0004 HM988_RS17585 PF01938 TRAM domain HM988_RS17585 PF04055 Radical SAM superfamily HM988_RS17590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HM988_RS17605 PF01197 Ribosomal protein L31 HM988_RS17615 PF00535 Glycosyl transferase family 2 HM988_RS17620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HM988_RS17620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HM988_RS17620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HM988_RS17620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HM988_RS17625 PF00664 ABC transporter transmembrane region HM988_RS17625 PF00005 ABC transporter HM988_RS17630 PF08281 Sigma-70, region 4 HM988_RS17630 PF04542 Sigma-70 region 2 HM988_RS17645 PF01557 Fumarylacetoacetate (FAA) hydrolase family HM988_RS17655 PF00005 ABC transporter HM988_RS17655 PF17755 UvrA DNA-binding domain HM988_RS17655 PF17760 UvrA interaction domain HM988_RS17665 PF03641 Possible lysine decarboxylase HM988_RS17680 PF02779 Transketolase, pyrimidine binding domain HM988_RS17680 PF02780 Transketolase, C-terminal domain HM988_RS17700 PF01170 Putative RNA methylase family UPF0020 HM988_RS17700 PF02926 THUMP domain HM988_RS17700 PF10672 S-adenosylmethionine-dependent methyltransferase HM988_RS17705 PF13649 Methyltransferase domain HM988_RS17775 PF00334 Nucleoside diphosphate kinase HM988_RS17780 PF01368 DHH family HM988_RS17780 PF02272 DHHA1 domain HM988_RS17790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HM988_RS17795 PF07687 Peptidase dimerisation domain HM988_RS17795 PF01546 Peptidase family M20/M25/M40 HM988_RS17800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HM988_RS17800 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HM988_RS17830 PF00588 SpoU rRNA Methylase family HM988_RS17830 PF08032 RNA 2'-O ribose methyltransferase substrate binding HM988_RS17835 PF01435 Peptidase family M48 HM988_RS17835 PF16491 CAAX prenyl protease N-terminal, five membrane helices HM988_RS17850 PF13291 ACT domain HM988_RS17850 PF02824 TGS domain HM988_RS17850 PF04607 Region found in RelA / SpoT proteins HM988_RS17860 PF00709 Adenylosuccinate synthetase HM988_RS17870 PF00202 Aminotransferase class-III HM988_RS17890 PF08501 Shikimate dehydrogenase substrate binding domain HM988_RS17890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HM988_RS17890 PF01488 Shikimate / quinate 5-dehydrogenase HM988_RS17915 PF03819 MazG nucleotide pyrophosphohydrolase domain HM988_RS17925 PF01327 Polypeptide deformylase HM988_RS17930 PF03652 Holliday junction resolvase HM988_RS17935 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HM988_RS17940 PF01381 Helix-turn-helix HM988_RS17945 PF14602 Hexapeptide repeat of succinyl-transferase HM988_RS17945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HM988_RS17945 PF00132 Bacterial transferase hexapeptide (six repeats) HM988_RS17965 PF00535 Glycosyl transferase family 2 HM988_RS17970 PF00535 Glycosyl transferase family 2 HM988_RS17975 PF00535 Glycosyl transferase family 2 HM988_RS17980 PF01522 Polysaccharide deacetylase HM988_RS17990 PF00535 Glycosyl transferase family 2 HM988_RS17995 PF13439 Glycosyltransferase Family 4 HM988_RS17995 PF00534 Glycosyl transferases group 1 HM988_RS18010 PF00733 Asparagine synthase HM988_RS18010 PF13537 Glutamine amidotransferase domain HM988_RS18020 PF02719 Polysaccharide biosynthesis protein HM988_RS18025 PF00483 Nucleotidyl transferase HM988_RS18035 PF02272 DHHA1 domain HM988_RS18035 PF01368 DHH family HM988_RS18035 PF01743 Poly A polymerase head domain HM988_RS18035 PF00571 CBS domain HM988_RS18040 PF02628 Cytochrome oxidase assembly protein HM988_RS18055 PF00005 ABC transporter HM988_RS18125 PF04851 Type III restriction enzyme, res subunit HM988_RS18125 PF17757 UvrB interaction domain HM988_RS18125 PF00271 Helicase conserved C-terminal domain HM988_RS18125 PF12344 Ultra-violet resistance protein B HM988_RS18135 PF00756 Putative esterase HM988_RS18145 PF00549 CoA-ligase HM988_RS18145 PF08442 ATP-grasp domain HM988_RS18155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HM988_RS18155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HM988_RS18160 PF07568 Histidine kinase HM988_RS18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS18160 PF12282 Signal transduction histidine kinase HM988_RS18165 PF00072 Response regulator receiver domain HM988_RS18165 PF00486 Transcriptional regulatory protein, C terminal HM988_RS18205 PF04389 Peptidase family M28 HM988_RS18205 PF04151 Bacterial pre-peptidase C-terminal domain HM988_RS18210 PF03976 Polyphosphate kinase 2 (PPK2) HM988_RS18215 PF02954 Bacterial regulatory protein, Fis family HM988_RS18215 PF00158 Sigma-54 interaction domain HM988_RS18215 PF00072 Response regulator receiver domain HM988_RS18225 PF12794 Mechanosensitive ion channel inner membrane domain 1 HM988_RS18225 PF12795 Mechanosensitive ion channel porin domain HM988_RS18225 PF00924 Mechanosensitive ion channel HM988_RS18235 PF00005 ABC transporter HM988_RS18235 PF13732 Domain of unknown function (DUF4162) HM988_RS18240 PF01556 DnaJ C terminal domain HM988_RS18240 PF00226 DnaJ domain HM988_RS18240 PF00684 DnaJ central domain HM988_RS18245 PF01025 GrpE HM988_RS18260 PF00072 Response regulator receiver domain HM988_RS18260 PF00196 Bacterial regulatory proteins, luxR family HM988_RS18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS18265 PF07730 Histidine kinase HM988_RS18275 PF01063 Amino-transferase class IV HM988_RS18290 PF01266 FAD dependent oxidoreductase HM988_RS18290 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HM988_RS18295 PF01370 NAD dependent epimerase/dehydratase family HM988_RS18295 PF08338 Domain of unknown function (DUF1731) HM988_RS18385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HM988_RS18435 PF02698 DUF218 domain HM988_RS18450 PF00578 AhpC/TSA family HM988_RS18455 PF00106 short chain dehydrogenase HM988_RS18480 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HM988_RS18480 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HM988_RS18485 PF10509 Galactokinase galactose-binding signature HM988_RS18485 PF08544 GHMP kinases C terminal HM988_RS18485 PF00288 GHMP kinases N terminal domain HM988_RS18495 PF07745 Glycosyl hydrolase family 53 HM988_RS18500 PF02837 Glycosyl hydrolases family 2, sugar binding domain HM988_RS18500 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HM988_RS18500 PF00703 Glycosyl hydrolases family 2 HM988_RS18500 PF16355 Domain of unknown function (DUF4982) HM988_RS18500 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HM988_RS18525 PF00892 EamA-like transporter family HM988_RS18530 PF00356 Bacterial regulatory proteins, lacI family HM988_RS18535 PF01081 KDPG and KHG aldolase HM988_RS18540 PF00365 Phosphofructokinase HM988_RS18550 PF00356 Bacterial regulatory proteins, lacI family HM988_RS18560 PF00623 RNA polymerase Rpb1, domain 2 HM988_RS18560 PF04997 RNA polymerase Rpb1, domain 1 HM988_RS18560 PF04983 RNA polymerase Rpb1, domain 3 HM988_RS18560 PF04998 RNA polymerase Rpb1, domain 5 HM988_RS18560 PF05000 RNA polymerase Rpb1, domain 4 HM988_RS18565 PF10385 RNA polymerase beta subunit external 1 domain HM988_RS18565 PF00562 RNA polymerase Rpb2, domain 6 HM988_RS18565 PF04565 RNA polymerase Rpb2, domain 3 HM988_RS18565 PF04561 RNA polymerase Rpb2, domain 2 HM988_RS18565 PF04563 RNA polymerase beta subunit HM988_RS18565 PF04560 RNA polymerase Rpb2, domain 7 HM988_RS18570 PF00542 Ribosomal protein L7/L12 C-terminal domain HM988_RS18570 PF16320 Ribosomal protein L7/L12 dimerisation domain HM988_RS18575 PF00466 Ribosomal protein L10 HM988_RS18580 PF00687 Ribosomal protein L1p/L10e family HM988_RS18585 PF03946 Ribosomal protein L11, N-terminal domain HM988_RS18585 PF00298 Ribosomal protein L11, RNA binding domain HM988_RS18590 PF00467 KOW motif HM988_RS18590 PF02357 Transcription termination factor nusG HM988_RS18605 PF03144 Elongation factor Tu domain 2 HM988_RS18605 PF00009 Elongation factor Tu GTP binding domain HM988_RS18605 PF03143 Elongation factor Tu C-terminal domain HM988_RS18630 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HM988_RS18630 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HM988_RS18635 PF02899 Phage integrase, N-terminal SAM-like domain HM988_RS18635 PF00589 Phage integrase family HM988_RS18640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HM988_RS18640 PF02770 Acyl-CoA dehydrogenase, middle domain HM988_RS18640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HM988_RS18650 PF01235 Sodium:alanine symporter family HM988_RS18655 PF02254 TrkA-N domain HM988_RS18655 PF07885 Ion channel HM988_RS18690 PF04239 Protein of unknown function (DUF421) HM988_RS18715 PF00571 CBS domain HM988_RS18715 PF00291 Pyridoxal-phosphate dependent enzyme HM988_RS18720 PF12704 MacB-like periplasmic core domain HM988_RS18720 PF02687 FtsX-like permease family HM988_RS18725 PF07075 Protein of unknown function (DUF1343) HM988_RS18735 PF03009 Glycerophosphoryl diester phosphodiesterase family HM988_RS18765 PF07969 Amidohydrolase family HM988_RS18780 PF00290 Tryptophan synthase alpha chain HM988_RS18795 PF00588 SpoU rRNA Methylase family HM988_RS18815 PF09905 DNA-binding protein VF530 HM988_RS18825 PF00270 DEAD/DEAH box helicase HM988_RS18825 PF00271 Helicase conserved C-terminal domain HM988_RS18835 PF04371 Porphyromonas-type peptidyl-arginine deiminase HM988_RS18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS18895 PF01590 GAF domain HM988_RS18895 PF08446 PAS fold HM988_RS18895 PF00512 His Kinase A (phospho-acceptor) domain HM988_RS18895 PF00360 Phytochrome region HM988_RS18920 PF03883 Peroxide stress protein YaaA HM988_RS18925 PF01479 S4 domain HM988_RS18925 PF00849 RNA pseudouridylate synthase HM988_RS18935 PF01820 D-ala D-ala ligase N-terminus HM988_RS18935 PF07478 D-ala D-ala ligase C-terminus HM988_RS18940 PF01467 Cytidylyltransferase-like HM988_RS18945 PF00072 Response regulator receiver domain HM988_RS18945 PF00196 Bacterial regulatory proteins, luxR family HM988_RS18950 PF07730 Histidine kinase HM988_RS18950 PF05384 Sensor protein DegS HM988_RS18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS18990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HM988_RS18990 PF02272 DHHA1 domain HM988_RS18990 PF01411 tRNA synthetases class II (A) HM988_RS18995 PF08460 Bacterial SH3 domain HM988_RS18995 PF01551 Peptidase family M23 HM988_RS19025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HM988_RS19025 PF01926 50S ribosome-binding GTPase HM988_RS19030 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HM988_RS19030 PF01476 LysM domain HM988_RS19045 PF05736 OprF membrane domain HM988_RS19045 PF00691 OmpA family HM988_RS19055 PF01926 50S ribosome-binding GTPase HM988_RS19055 PF07650 KH domain HM988_RS19060 PF02911 Formyl transferase, C-terminal domain HM988_RS19060 PF00551 Formyl transferase HM988_RS19070 PF03062 MBOAT, membrane-bound O-acyltransferase family HM988_RS19080 PF14684 Tricorn protease C1 domain HM988_RS19080 PF14685 Tricorn protease PDZ domain HM988_RS19080 PF03572 Peptidase family S41 HM988_RS19080 PF07676 WD40-like Beta Propeller Repeat HM988_RS19100 PF02566 OsmC-like protein HM988_RS19115 PF02424 ApbE family HM988_RS19140 PF00873 AcrB/AcrD/AcrF family HM988_RS19190 PF01925 Sulfite exporter TauE/SafE HM988_RS19195 PF00753 Metallo-beta-lactamase superfamily HM988_RS19225 PF00072 Response regulator receiver domain HM988_RS19225 PF00196 Bacterial regulatory proteins, luxR family HM988_RS19230 PF05384 Sensor protein DegS HM988_RS19230 PF07730 Histidine kinase HM988_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HM988_RS19250 PF00121 Triosephosphate isomerase HM988_RS19255 PF00528 Binding-protein-dependent transport system inner membrane component HM988_RS19270 PF00809 Pterin binding enzyme HM988_RS19280 PF10372 Bacterial membrane-spanning protein N-terminus HM988_RS19280 PF02457 DisA bacterial checkpoint controller nucleotide-binding HM988_RS19295 PF00005 ABC transporter HM988_RS19295 PF00664 ABC transporter transmembrane region HM988_RS19300 PF01416 tRNA pseudouridine synthase HM988_RS19315 PF07497 Rho termination factor, RNA-binding domain HM988_RS19315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HM988_RS19360 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HM988_RS19360 PF00437 Type II/IV secretion system protein HM988_RS19365 PF14245 Type IV pilin PilA HM988_RS19365 PF07963 Prokaryotic N-terminal methylation motif HM988_RS19370 PF00482 Type II secretion system (T2SS), protein F