locus-tag class description JSQ73_RS00020 PF00120 Glutamine synthetase, catalytic domain JSQ73_RS00025 PF00308 Bacterial dnaA protein JSQ73_RS00025 PF08299 Bacterial dnaA protein helix-turn-helix JSQ73_RS00025 PF11638 DnaA N-terminal domain JSQ73_RS00030 PF07549 SecD/SecF GG Motif JSQ73_RS00030 PF02355 Protein export membrane protein JSQ73_RS00040 PF02096 60Kd inner membrane protein JSQ73_RS00040 PF14849 YidC periplasmic domain JSQ73_RS00045 PF00885 6,7-dimethyl-8-ribityllumazine synthase JSQ73_RS00050 PF01029 NusB family JSQ73_RS00060 PF00692 dUTPase JSQ73_RS00085 PF01648 4'-phosphopantetheinyl transferase superfamily JSQ73_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ73_RS00090 PF03129 Anticodon binding domain JSQ73_RS00110 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JSQ73_RS00110 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JSQ73_RS00110 PF13288 DXP reductoisomerase C-terminal domain JSQ73_RS00120 PF00005 ABC transporter JSQ73_RS00125 PF05173 Dihydrodipicolinate reductase, C-terminus JSQ73_RS00125 PF01113 Dihydrodipicolinate reductase, N-terminus JSQ73_RS00140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JSQ73_RS00160 PF08264 Anticodon-binding domain of tRNA JSQ73_RS00160 PF00133 tRNA synthetases class I (I, L, M and V) JSQ73_RS00170 PF00115 Cytochrome C and Quinol oxidase polypeptide I JSQ73_RS00185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JSQ73_RS00185 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_RS00190 PF00589 Phage integrase family JSQ73_RS00190 PF02899 Phage integrase, N-terminal SAM-like domain JSQ73_RS00195 PF02934 GatB/GatE catalytic domain JSQ73_RS00195 PF02637 GatB domain JSQ73_RS00200 PF00676 Dehydrogenase E1 component JSQ73_RS00205 PF03653 Uncharacterised protein family (UPF0093) JSQ73_RS00210 PF00529 HlyD membrane-fusion protein of T1SS JSQ73_RS00210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JSQ73_RS00215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JSQ73_RS00215 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JSQ73_RS00220 PF00115 Cytochrome C and Quinol oxidase polypeptide I JSQ73_RS00225 PF01040 UbiA prenyltransferase family JSQ73_RS00230 PF00075 RNase H JSQ73_RS00240 PF01406 tRNA synthetases class I (C) catalytic domain JSQ73_RS00240 PF09190 DALR domain JSQ73_RS00245 PF06055 Exopolysaccharide synthesis, ExoD JSQ73_RS00250 PF02416 mttA/Hcf106 family JSQ73_RS00255 PF00005 ABC transporter JSQ73_RS00255 PF08402 TOBE domain JSQ73_RS00275 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JSQ73_RS00285 PF01926 50S ribosome-binding GTPase JSQ73_RS00285 PF06071 Protein of unknown function (DUF933) JSQ73_RS00305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ73_RS00305 PF00364 Biotin-requiring enzyme JSQ73_RS00305 PF02817 e3 binding domain JSQ73_RS00390 PF02896 PEP-utilising enzyme, TIM barrel domain JSQ73_RS00390 PF00391 PEP-utilising enzyme, mobile domain JSQ73_RS00390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JSQ73_RS00395 PF04002 RadC-like JAB domain JSQ73_RS00400 PF01381 Helix-turn-helix JSQ73_RS00470 PF04055 Radical SAM superfamily JSQ73_RS00470 PF00919 Uncharacterized protein family UPF0004 JSQ73_RS00500 PF17864 RuvB AAA lid domain JSQ73_RS00500 PF05491 RuvB C-terminal winged helix domain JSQ73_RS00500 PF05496 Holliday junction DNA helicase RuvB P-loop domain JSQ73_RS00505 PF07499 RuvA, C-terminal domain JSQ73_RS00505 PF01330 RuvA N terminal domain JSQ73_RS00510 PF00034 Cytochrome c JSQ73_RS00520 PF00580 UvrD/REP helicase N-terminal domain JSQ73_RS00520 PF13361 UvrD-like helicase C-terminal domain JSQ73_RS00530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JSQ73_RS00535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JSQ73_RS00540 PF00361 Proton-conducting membrane transporter JSQ73_RS00540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JSQ73_RS00545 PF00361 Proton-conducting membrane transporter JSQ73_RS00550 PF00361 Proton-conducting membrane transporter JSQ73_RS00555 PF02237 Biotin protein ligase C terminal domain JSQ73_RS00555 PF03099 Biotin/lipoate A/B protein ligase family JSQ73_RS00560 PF03100 CcmE JSQ73_RS00595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JSQ73_RS00595 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JSQ73_RS00595 PF10531 SLBB domain JSQ73_RS00600 PF00707 Translation initiation factor IF-3, C-terminal domain JSQ73_RS00600 PF05198 Translation initiation factor IF-3, N-terminal domain JSQ73_RS00605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ73_RS00605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JSQ73_RS00605 PF03129 Anticodon binding domain JSQ73_RS00610 PF12838 4Fe-4S dicluster domain JSQ73_RS00615 PF01926 50S ribosome-binding GTPase JSQ73_RS00615 PF12631 MnmE helical domain JSQ73_RS00615 PF10396 GTP-binding protein TrmE N-terminus JSQ73_RS00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_RS00640 PF00266 Aminotransferase class-V JSQ73_RS00645 PF01098 Cell cycle protein JSQ73_RS00650 PF00361 Proton-conducting membrane transporter JSQ73_RS00680 PF01255 Putative undecaprenyl diphosphate synthase JSQ73_RS00695 PF01467 Cytidylyltransferase-like JSQ73_RS00710 PF01494 FAD binding domain JSQ73_RS00720 PF03330 Lytic transglycolase JSQ73_RS00725 PF08245 Mur ligase middle domain JSQ73_RS00725 PF01225 Mur ligase family, catalytic domain JSQ73_RS00725 PF02875 Mur ligase family, glutamate ligase domain JSQ73_RS00735 PF07690 Major Facilitator Superfamily JSQ73_RS00765 PF00472 RF-1 domain JSQ73_RS00765 PF03462 PCRF domain JSQ73_RS00770 PF01926 50S ribosome-binding GTPase JSQ73_RS00775 PF00696 Amino acid kinase family JSQ73_RS00785 PF00709 Adenylosuccinate synthetase JSQ73_RS00810 PF01176 Translation initiation factor 1A / IF-1 JSQ73_RS00815 PF02545 Maf-like protein JSQ73_RS00840 PF01235 Sodium:alanine symporter family JSQ73_RS00850 PF00118 TCP-1/cpn60 chaperonin family JSQ73_RS00855 PF00166 Chaperonin 10 Kd subunit JSQ73_RS00860 PF01571 Aminomethyltransferase folate-binding domain JSQ73_RS00870 PF00268 Ribonucleotide reductase, small chain JSQ73_RS00890 PF02565 Recombination protein O C terminal JSQ73_RS00890 PF11967 Recombination protein O N terminal JSQ73_RS00895 PF00990 Diguanylate cyclase, GGDEF domain JSQ73_RS00895 PF00072 Response regulator receiver domain JSQ73_RS00905 PF05088 Bacterial NAD-glutamate dehydrogenase JSQ73_RS00910 PF02861 Clp amino terminal domain, pathogenicity island component JSQ73_RS00910 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ73_RS00910 PF17871 AAA lid domain JSQ73_RS00910 PF07724 AAA domain (Cdc48 subfamily) JSQ73_RS00910 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_RS00945 PF01258 Prokaryotic dksA/traR C4-type zinc finger JSQ73_RS00965 PF00814 Glycoprotease family JSQ73_RS00975 PF08241 Methyltransferase domain JSQ73_RS00980 PF08275 DNA primase catalytic core, N-terminal domain JSQ73_RS00980 PF13662 Toprim domain JSQ73_RS00980 PF01807 CHC2 zinc finger JSQ73_RS00990 PF00111 2Fe-2S iron-sulfur cluster binding domain JSQ73_RS01000 PF03918 Cytochrome C biogenesis protein JSQ73_RS01005 PF12705 PD-(D/E)XK nuclease superfamily JSQ73_RS01005 PF13361 UvrD-like helicase C-terminal domain JSQ73_RS01005 PF00580 UvrD/REP helicase N-terminal domain JSQ73_RS01010 PF08544 GHMP kinases C terminal JSQ73_RS01010 PF00288 GHMP kinases N terminal domain JSQ73_RS01020 PF00950 ABC 3 transport family JSQ73_RS01035 PF00749 tRNA synthetases class I (E and Q), catalytic domain JSQ73_RS01040 PF00679 Elongation factor G C-terminus JSQ73_RS01040 PF00009 Elongation factor Tu GTP binding domain JSQ73_RS01040 PF03144 Elongation factor Tu domain 2 JSQ73_RS01045 PF01743 Poly A polymerase head domain JSQ73_RS01045 PF12627 Probable RNA and SrmB- binding site of polymerase A JSQ73_RS01045 PF13735 tRNA nucleotidyltransferase domain 2 putative JSQ73_RS01075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JSQ73_RS01075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JSQ73_RS01080 PF00902 Sec-independent protein translocase protein (TatC) JSQ73_RS01090 PF10417 C-terminal domain of 1-Cys peroxiredoxin JSQ73_RS01090 PF00578 AhpC/TSA family JSQ73_RS01095 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_RS01105 PF03109 ABC1 family JSQ73_RS01110 PF00005 ABC transporter JSQ73_RS01115 PF01297 Zinc-uptake complex component A periplasmic JSQ73_RS01120 PF00471 Ribosomal protein L33 JSQ73_RS01125 PF12111 Polyribonucleotide phosphorylase C terminal JSQ73_RS01125 PF10150 Ribonuclease E/G family JSQ73_RS01125 PF00575 S1 RNA binding domain JSQ73_RS01130 PF00012 Hsp70 protein JSQ73_RS01135 PF01722 BolA-like protein JSQ73_RS01140 PF01053 Cys/Met metabolism PLP-dependent enzyme JSQ73_RS01145 PF02875 Mur ligase family, glutamate ligase domain JSQ73_RS01145 PF08245 Mur ligase middle domain JSQ73_RS01160 PF01300 Telomere recombination JSQ73_RS01165 PF09115 DNA polymerase III, delta subunit, C terminal JSQ73_RS01185 PF00361 Proton-conducting membrane transporter JSQ73_RS01190 PF00772 DnaB-like helicase N terminal domain JSQ73_RS01190 PF03796 DnaB-like helicase C terminal domain JSQ73_RS01220 PF01979 Amidohydrolase family JSQ73_RS01225 PF00570 HRDC domain JSQ73_RS01225 PF01612 3'-5' exonuclease JSQ73_RS01230 PF01121 Dephospho-CoA kinase JSQ73_RS01250 PF08264 Anticodon-binding domain of tRNA JSQ73_RS01250 PF09334 tRNA synthetases class I (M) JSQ73_RS01405 PF07516 SecA Wing and Scaffold domain JSQ73_RS01405 PF07517 SecA DEAD-like domain JSQ73_RS01405 PF01043 SecA preprotein cross-linking domain JSQ73_RS01445 PF08245 Mur ligase middle domain JSQ73_RS01475 PF09312 SurA N-terminal domain JSQ73_RS01480 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_RS01655 PF00121 Triosephosphate isomerase JSQ73_RS01665 PF00398 Ribosomal RNA adenine dimethylase JSQ73_RS01670 PF00571 CBS domain JSQ73_RS01670 PF00478 IMP dehydrogenase / GMP reductase domain JSQ73_RS01675 PF07497 Rho termination factor, RNA-binding domain JSQ73_RS01675 PF07498 Rho termination factor, N-terminal domain JSQ73_RS01675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ73_RS01695 PF07690 Major Facilitator Superfamily JSQ73_RS01695 PF00083 Sugar (and other) transporter JSQ73_RS01700 PF18073 Rubredoxin metal binding domain JSQ73_RS01705 PF00448 SRP54-type protein, GTPase domain JSQ73_RS01705 PF02881 SRP54-type protein, helical bundle domain JSQ73_RS01710 PF01592 NifU-like N terminal domain JSQ73_RS01715 PF01521 Iron-sulphur cluster biosynthesis JSQ73_RS01720 PF07743 HSCB C-terminal oligomerisation domain JSQ73_RS01725 PF00012 Hsp70 protein JSQ73_RS01730 PF10502 Signal peptidase, peptidase S26 JSQ73_RS01740 PF02780 Transketolase, C-terminal domain JSQ73_RS01740 PF00364 Biotin-requiring enzyme JSQ73_RS01740 PF02779 Transketolase, pyrimidine binding domain JSQ73_RS01825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JSQ73_RS01825 PF00925 GTP cyclohydrolase II JSQ73_RS01830 PF01272 Transcription elongation factor, GreA/GreB, C-term JSQ73_RS01830 PF03449 Transcription elongation factor, N-terminal JSQ73_RS01835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ73_RS01835 PF00306 ATP synthase alpha/beta chain, C terminal domain JSQ73_RS01835 PF02874 ATP synthase alpha/beta family, beta-barrel domain JSQ73_RS01840 PF00213 ATP synthase delta (OSCP) subunit JSQ73_RS01845 PF02021 Uncharacterised protein family UPF0102 JSQ73_RS01850 PF01196 Ribosomal protein L17 JSQ73_RS01855 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JSQ73_RS01855 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JSQ73_RS01855 PF01000 RNA polymerase Rpb3/RpoA insert domain JSQ73_RS01860 PF00411 Ribosomal protein S11 JSQ73_RS01865 PF00416 Ribosomal protein S13/S18 JSQ73_RS01875 PF00344 SecY translocase JSQ73_RS01880 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JSQ73_RS01885 PF03719 Ribosomal protein S5, C-terminal domain JSQ73_RS01885 PF00333 Ribosomal protein S5, N-terminal domain JSQ73_RS01890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JSQ73_RS01895 PF00347 Ribosomal protein L6 JSQ73_RS01900 PF00410 Ribosomal protein S8 JSQ73_RS01905 PF00253 Ribosomal protein S14p/S29e JSQ73_RS01910 PF00673 ribosomal L5P family C-terminus JSQ73_RS01910 PF00281 Ribosomal protein L5 JSQ73_RS01915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JSQ73_RS01920 PF00238 Ribosomal protein L14p/L23e JSQ73_RS01925 PF00366 Ribosomal protein S17 JSQ73_RS01930 PF00831 Ribosomal L29 protein JSQ73_RS01935 PF00252 Ribosomal protein L16p/L10e JSQ73_RS01940 PF07650 KH domain JSQ73_RS01940 PF00189 Ribosomal protein S3, C-terminal domain JSQ73_RS01945 PF00237 Ribosomal protein L22p/L17e JSQ73_RS01950 PF00203 Ribosomal protein S19 JSQ73_RS01955 PF03947 Ribosomal Proteins L2, C-terminal domain JSQ73_RS01955 PF00181 Ribosomal Proteins L2, RNA binding domain JSQ73_RS01960 PF00276 Ribosomal protein L23 JSQ73_RS01965 PF00573 Ribosomal protein L4/L1 family JSQ73_RS01970 PF00297 Ribosomal protein L3 JSQ73_RS01975 PF00338 Ribosomal protein S10p/S20e JSQ73_RS01985 PF00156 Phosphoribosyl transferase domain JSQ73_RS01990 PF00375 Sodium:dicarboxylate symporter family JSQ73_RS01995 PF01565 FAD binding domain JSQ73_RS01995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JSQ73_RS02000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JSQ73_RS02000 PF03900 Porphobilinogen deaminase, C-terminal domain JSQ73_RS02010 PF02355 Protein export membrane protein JSQ73_RS02030 PF00270 DEAD/DEAH box helicase JSQ73_RS02030 PF00271 Helicase conserved C-terminal domain JSQ73_RS02030 PF17191 RecG wedge domain JSQ73_RS02040 PF00444 Ribosomal protein L36 JSQ73_RS02045 PF03618 Kinase/pyrophosphorylase JSQ73_RS02050 PF01578 Cytochrome C assembly protein JSQ73_RS02075 PF00117 Glutamine amidotransferase class-I JSQ73_RS02075 PF02540 NAD synthase JSQ73_RS02075 PF00958 GMP synthase C terminal domain JSQ73_RS02080 PF03471 Transporter associated domain JSQ73_RS02080 PF03741 Integral membrane protein TerC family JSQ73_RS02100 PF00009 Elongation factor Tu GTP binding domain JSQ73_RS02100 PF06421 GTP-binding protein LepA C-terminus JSQ73_RS02100 PF03144 Elongation factor Tu domain 2 JSQ73_RS02100 PF14492 Elongation Factor G, domain II JSQ73_RS02100 PF00679 Elongation factor G C-terminus JSQ73_RS02115 PF00462 Glutaredoxin JSQ73_RS02120 PF06574 FAD synthetase JSQ73_RS02120 PF01687 Riboflavin kinase JSQ73_RS02125 PF01252 Signal peptidase (SPase) II JSQ73_RS02130 PF05193 Peptidase M16 inactive domain JSQ73_RS02130 PF00675 Insulinase (Peptidase family M16) JSQ73_RS02140 PF00551 Formyl transferase JSQ73_RS02170 PF01668 SmpB protein JSQ73_RS02175 PF01790 Prolipoprotein diacylglyceryl transferase JSQ73_RS02185 PF13091 PLD-like domain JSQ73_RS02190 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JSQ73_RS02225 PF02779 Transketolase, pyrimidine binding domain JSQ73_RS02225 PF16870 2-oxoglutarate dehydrogenase C-terminal JSQ73_RS02225 PF16078 2-oxoglutarate dehydrogenase N-terminus JSQ73_RS02225 PF00676 Dehydrogenase E1 component JSQ73_RS02255 PF01820 D-ala D-ala ligase N-terminus JSQ73_RS02255 PF07478 D-ala D-ala ligase C-terminus JSQ73_RS02265 PF00037 4Fe-4S binding domain JSQ73_RS02265 PF11953 Domain of unknown function (DUF3470) JSQ73_RS02270 PF17782 DprA winged helix domain JSQ73_RS02270 PF02481 DNA recombination-mediator protein A JSQ73_RS02300 PF14602 Hexapeptide repeat of succinyl-transferase JSQ73_RS02300 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JSQ73_RS02300 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_RS02310 PF00890 FAD binding domain JSQ73_RS02310 PF02910 Fumarate reductase flavoprotein C-term JSQ73_RS02325 PF00625 Guanylate kinase JSQ73_RS02340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JSQ73_RS02340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JSQ73_RS02345 PF13416 Bacterial extracellular solute-binding protein JSQ73_RS02355 PF01513 ATP-NAD kinase JSQ73_RS02360 PF01197 Ribosomal protein L31 JSQ73_RS02365 PF00698 Acyl transferase domain JSQ73_RS02370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JSQ73_RS02370 PF01676 Metalloenzyme superfamily JSQ73_RS02385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JSQ73_RS02385 PF01411 tRNA synthetases class II (A) JSQ73_RS02385 PF02272 DHHA1 domain JSQ73_RS02405 PF01632 Ribosomal protein L35 JSQ73_RS02410 PF00453 Ribosomal protein L20 JSQ73_RS02415 PF00551 Formyl transferase JSQ73_RS02415 PF02911 Formyl transferase, C-terminal domain JSQ73_RS02420 PF01808 AICARFT/IMPCHase bienzyme JSQ73_RS02420 PF02142 MGS-like domain JSQ73_RS02435 PF10576 Iron-sulfur binding domain of endonuclease III JSQ73_RS02435 PF00633 Helix-hairpin-helix motif JSQ73_RS02435 PF00730 HhH-GPD superfamily base excision DNA repair protein JSQ73_RS02455 PF00886 Ribosomal protein S16 JSQ73_RS02460 PF00348 Polyprenyl synthetase JSQ73_RS02465 PF01025 GrpE JSQ73_RS02470 PF00579 tRNA synthetases class I (W and Y) JSQ73_RS02510 PF00892 EamA-like transporter family JSQ73_RS02515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JSQ73_RS02515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JSQ73_RS02515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JSQ73_RS02525 PF01212 Beta-eliminating lyase JSQ73_RS02530 PF01212 Beta-eliminating lyase JSQ73_RS02535 PF00664 ABC transporter transmembrane region JSQ73_RS02535 PF00005 ABC transporter JSQ73_RS02555 PF01370 NAD dependent epimerase/dehydratase family JSQ73_RS02560 PF14602 Hexapeptide repeat of succinyl-transferase JSQ73_RS02560 PF12804 MobA-like NTP transferase domain JSQ73_RS02560 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_RS02630 PF16198 tRNA pseudouridylate synthase B C-terminal domain JSQ73_RS02630 PF01509 TruB family pseudouridylate synthase (N terminal domain) JSQ73_RS02635 PF16198 tRNA pseudouridylate synthase B C-terminal domain JSQ73_RS02635 PF01509 TruB family pseudouridylate synthase (N terminal domain) JSQ73_RS02640 PF00312 Ribosomal protein S15 JSQ73_RS02645 PF01138 3' exoribonuclease family, domain 1 JSQ73_RS02645 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JSQ73_RS02645 PF00013 KH domain JSQ73_RS02645 PF00575 S1 RNA binding domain JSQ73_RS02645 PF03725 3' exoribonuclease family, domain 2 JSQ73_RS02650 PF00834 Ribulose-phosphate 3 epimerase family JSQ73_RS02675 PF00162 Phosphoglycerate kinase JSQ73_RS02680 PF00464 Serine hydroxymethyltransferase JSQ73_RS02700 PF00155 Aminotransferase class I and II JSQ73_RS02710 PF07516 SecA Wing and Scaffold domain JSQ73_RS02710 PF01043 SecA preprotein cross-linking domain JSQ73_RS02710 PF07517 SecA DEAD-like domain JSQ73_RS02710 PF02810 SEC-C motif JSQ73_RS02720 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JSQ73_RS02750 PF02646 RmuC family JSQ73_RS02755 PF07943 Penicillin-binding protein 5, C-terminal domain JSQ73_RS02755 PF00768 D-alanyl-D-alanine carboxypeptidase JSQ73_RS02780 PF01208 Uroporphyrinogen decarboxylase (URO-D) JSQ73_RS02790 PF00571 CBS domain JSQ73_RS02790 PF03471 Transporter associated domain JSQ73_RS02815 PF00231 ATP synthase JSQ73_RS02820 PF01523 Putative modulator of DNA gyrase JSQ73_RS02825 PF00313 'Cold-shock' DNA-binding domain JSQ73_RS02830 PF00271 Helicase conserved C-terminal domain JSQ73_RS02830 PF00270 DEAD/DEAH box helicase JSQ73_RS02900 PF04002 RadC-like JAB domain JSQ73_RS02975 PF00180 Isocitrate/isopropylmalate dehydrogenase JSQ73_RS02975 PF18324 Hypothetical protein TT1725 JSQ73_RS02985 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JSQ73_RS02985 PF02843 Phosphoribosylglycinamide synthetase, C domain JSQ73_RS02985 PF02844 Phosphoribosylglycinamide synthetase, N domain JSQ73_RS02990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ73_RS02990 PF02403 Seryl-tRNA synthetase N-terminal domain JSQ73_RS03000 PF01207 Dihydrouridine synthase (Dus) JSQ73_RS03005 PF04565 RNA polymerase Rpb2, domain 3 JSQ73_RS03005 PF04998 RNA polymerase Rpb1, domain 5 JSQ73_RS03005 PF10385 RNA polymerase beta subunit external 1 domain JSQ73_RS03005 PF00562 RNA polymerase Rpb2, domain 6 JSQ73_RS03005 PF04560 RNA polymerase Rpb2, domain 7 JSQ73_RS03005 PF04561 RNA polymerase Rpb2, domain 2 JSQ73_RS03005 PF04563 RNA polymerase beta subunit JSQ73_RS03005 PF00623 RNA polymerase Rpb1, domain 2 JSQ73_RS03005 PF04983 RNA polymerase Rpb1, domain 3 JSQ73_RS03005 PF05000 RNA polymerase Rpb1, domain 4 JSQ73_RS03005 PF04997 RNA polymerase Rpb1, domain 1 JSQ73_RS03010 PF16320 Ribosomal protein L7/L12 dimerisation domain JSQ73_RS03010 PF00542 Ribosomal protein L7/L12 C-terminal domain JSQ73_RS03015 PF00466 Ribosomal protein L10 JSQ73_RS03020 PF00687 Ribosomal protein L1p/L10e family JSQ73_RS03025 PF00298 Ribosomal protein L11, RNA binding domain JSQ73_RS03025 PF03946 Ribosomal protein L11, N-terminal domain JSQ73_RS03030 PF00467 KOW motif JSQ73_RS03030 PF02357 Transcription termination factor nusG JSQ73_RS03065 PF12327 FtsZ family, C-terminal domain JSQ73_RS03065 PF00091 Tubulin/FtsZ family, GTPase domain JSQ73_RS03075 PF02130 Uncharacterized protein family UPF0054 JSQ73_RS03080 PF13085 2Fe-2S iron-sulfur cluster binding domain JSQ73_RS03100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JSQ73_RS03100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JSQ73_RS03105 PF00486 Transcriptional regulatory protein, C terminal JSQ73_RS03105 PF00072 Response regulator receiver domain JSQ73_RS03125 PF01702 Queuine tRNA-ribosyltransferase JSQ73_RS03135 PF00675 Insulinase (Peptidase family M16) JSQ73_RS03135 PF05193 Peptidase M16 inactive domain JSQ73_RS03140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JSQ73_RS03140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JSQ73_RS03155 PF14492 Elongation Factor G, domain II JSQ73_RS03155 PF03764 Elongation factor G, domain IV JSQ73_RS03155 PF03144 Elongation factor Tu domain 2 JSQ73_RS03155 PF00009 Elongation factor Tu GTP binding domain JSQ73_RS03155 PF00679 Elongation factor G C-terminus JSQ73_RS03160 PF00177 Ribosomal protein S7p/S5e JSQ73_RS03165 PF00164 Ribosomal protein S12/S23 JSQ73_RS03170 PF17827 PrmC N-terminal domain JSQ73_RS03170 PF02390 Putative methyltransferase JSQ73_RS03170 PF05175 Methyltransferase small domain JSQ73_RS03180 PF04972 BON domain JSQ73_RS03195 PF05697 Bacterial trigger factor protein (TF) JSQ73_RS03195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JSQ73_RS03195 PF05698 Bacterial trigger factor protein (TF) C-terminus JSQ73_RS03200 PF00574 Clp protease JSQ73_RS03205 PF07724 AAA domain (Cdc48 subfamily) JSQ73_RS03205 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ73_RS03205 PF06689 ClpX C4-type zinc finger JSQ73_RS03210 PF05362 Lon protease (S16) C-terminal proteolytic domain JSQ73_RS03210 PF02190 ATP-dependent protease La (LON) substrate-binding domain JSQ73_RS03210 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_RS03215 PF00905 Penicillin binding protein transpeptidase domain JSQ73_RS03215 PF03717 Penicillin-binding Protein dimerisation domain JSQ73_RS03220 PF01522 Polysaccharide deacetylase JSQ73_RS03245 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JSQ73_RS03250 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JSQ73_RS03255 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JSQ73_RS03260 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JSQ73_RS03270 PF01921 tRNA synthetases class I (K) JSQ73_RS03280 PF01728 FtsJ-like methyltransferase JSQ73_RS03285 PF10691 Protein of unknown function (DUF2497) JSQ73_RS03295 PF00572 Ribosomal protein L13 JSQ73_RS03300 PF00380 Ribosomal protein S9/S16 JSQ73_RS03310 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JSQ73_RS03315 PF00011 Hsp20/alpha crystallin family JSQ73_RS03320 PF00749 tRNA synthetases class I (E and Q), catalytic domain JSQ73_RS03330 PF18140 Propionyl-coenzyme A carboxylase BT domain JSQ73_RS03330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ73_RS03330 PF00364 Biotin-requiring enzyme JSQ73_RS03330 PF02785 Biotin carboxylase C-terminal domain JSQ73_RS03330 PF00289 Biotin carboxylase, N-terminal domain JSQ73_RS03335 PF02628 Cytochrome oxidase assembly protein JSQ73_RS03355 PF00137 ATP synthase subunit C JSQ73_RS03360 PF00119 ATP synthase A chain JSQ73_RS03370 PF03483 B3/4 domain JSQ73_RS03370 PF03484 tRNA synthetase B5 domain JSQ73_RS03370 PF03147 Ferredoxin-fold anticodon binding domain JSQ73_RS03370 PF01588 Putative tRNA binding domain JSQ73_RS03370 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JSQ73_RS03380 PF00133 tRNA synthetases class I (I, L, M and V) JSQ73_RS03380 PF08264 Anticodon-binding domain of tRNA JSQ73_RS03385 PF00919 Uncharacterized protein family UPF0004 JSQ73_RS03385 PF01938 TRAM domain JSQ73_RS03385 PF04055 Radical SAM superfamily JSQ73_RS03395 PF02272 DHHA1 domain JSQ73_RS03395 PF17768 RecJ OB domain JSQ73_RS03395 PF01368 DHH family JSQ73_RS03400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JSQ73_RS03410 PF03060 Nitronate monooxygenase JSQ73_RS03430 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JSQ73_RS03465 PF00557 Metallopeptidase family M24 JSQ73_RS03465 PF01321 Creatinase/Prolidase N-terminal domain JSQ73_RS03470 PF01134 Glucose inhibited division protein A JSQ73_RS03470 PF13932 GidA associated domain JSQ73_RS03485 PF03023 Lipid II flippase MurJ JSQ73_RS03515 PF03099 Biotin/lipoate A/B protein ligase family JSQ73_RS03520 PF02016 LD-carboxypeptidase N-terminal domain JSQ73_RS03520 PF17676 LD-carboxypeptidase C-terminal domain JSQ73_RS03525 PF02811 PHP domain JSQ73_RS03525 PF14579 Helix-hairpin-helix motif JSQ73_RS03525 PF07733 Bacterial DNA polymerase III alpha NTPase domain JSQ73_RS03525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JSQ73_RS03530 PF01250 Ribosomal protein S6 JSQ73_RS03535 PF01084 Ribosomal protein S18 JSQ73_RS03540 PF03948 Ribosomal protein L9, C-terminal domain JSQ73_RS03540 PF01281 Ribosomal protein L9, N-terminal domain JSQ73_RS03545 PF10397 Adenylosuccinate lyase C-terminus JSQ73_RS03545 PF00206 Lyase JSQ73_RS03555 PF13685 Iron-containing alcohol dehydrogenase JSQ73_RS03560 PF07687 Peptidase dimerisation domain JSQ73_RS03560 PF01546 Peptidase family M20/M25/M40 JSQ73_RS03595 PF00186 Dihydrofolate reductase JSQ73_RS03600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JSQ73_RS03600 PF00809 Pterin binding enzyme JSQ73_RS03610 PF03070 TENA/THI-4/PQQC family JSQ73_RS03625 PF00085 Thioredoxin JSQ73_RS03645 PF07650 KH domain JSQ73_RS03645 PF01926 50S ribosome-binding GTPase JSQ73_RS03700 PF17773 UPF0176 acylphosphatase like domain JSQ73_RS03700 PF00581 Rhodanese-like domain JSQ73_RS03705 PF00528 Binding-protein-dependent transport system inner membrane component JSQ73_RS03710 PF04379 ApaG domain JSQ73_RS03715 PF02222 ATP-grasp domain JSQ73_RS03715 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JSQ73_RS03720 PF01118 Semialdehyde dehydrogenase, NAD binding domain JSQ73_RS03720 PF02774 Semialdehyde dehydrogenase, dimerisation domain JSQ73_RS03730 PF00324 Amino acid permease JSQ73_RS03735 PF13520 Amino acid permease JSQ73_RS03745 PF01975 Survival protein SurE JSQ73_RS03750 PF13393 Histidyl-tRNA synthetase JSQ73_RS03750 PF03129 Anticodon binding domain JSQ73_RS03755 PF01106 NifU-like domain JSQ73_RS03760 PF00226 DnaJ domain JSQ73_RS03760 PF01556 DnaJ C terminal domain JSQ73_RS03760 PF00684 DnaJ central domain JSQ73_RS03790 PF00033 Cytochrome b/b6/petB JSQ73_RS03790 PF00032 Cytochrome b(C-terminal)/b6/petD JSQ73_RS03795 PF00033 Cytochrome b/b6/petB JSQ73_RS03795 PF02167 Cytochrome C1 family JSQ73_RS03795 PF00032 Cytochrome b(C-terminal)/b6/petD JSQ73_RS03800 PF12344 Ultra-violet resistance protein B JSQ73_RS03800 PF02151 UvrB/uvrC motif JSQ73_RS03800 PF17757 UvrB interaction domain JSQ73_RS03800 PF00271 Helicase conserved C-terminal domain JSQ73_RS03800 PF04851 Type III restriction enzyme, res subunit JSQ73_RS03810 PF00216 Bacterial DNA-binding protein JSQ73_RS03820 PF01551 Peptidase family M23 JSQ73_RS03825 PF09334 tRNA synthetases class I (M) JSQ73_RS03825 PF13603 Leucyl-tRNA synthetase, Domain 2 JSQ73_RS03825 PF08264 Anticodon-binding domain of tRNA JSQ73_RS03825 PF00133 tRNA synthetases class I (I, L, M and V) JSQ73_RS03840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JSQ73_RS03840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JSQ73_RS03845 PF02441 Flavoprotein JSQ73_RS03850 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) JSQ73_RS03855 PF00571 CBS domain JSQ73_RS03855 PF03471 Transporter associated domain JSQ73_RS03855 PF01595 Cyclin M transmembrane N-terminal domain JSQ73_RS03860 PF00202 Aminotransferase class-III JSQ73_RS03865 PF00334 Nucleoside diphosphate kinase JSQ73_RS03875 PF00762 Ferrochelatase JSQ73_RS03890 PF00227 Proteasome subunit JSQ73_RS03895 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_RS03895 PF07724 AAA domain (Cdc48 subfamily) JSQ73_RS03895 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ73_RS03905 PF00348 Polyprenyl synthetase JSQ73_RS03910 PF00550 Phosphopantetheine attachment site JSQ73_RS03915 PF00109 Beta-ketoacyl synthase, N-terminal domain JSQ73_RS03915 PF02801 Beta-ketoacyl synthase, C-terminal domain JSQ73_RS03920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JSQ73_RS03925 PF02511 Thymidylate synthase complementing protein JSQ73_RS03955 PF18074 Primosomal protein N C-terminal domain JSQ73_RS03955 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JSQ73_RS03955 PF00270 DEAD/DEAH box helicase JSQ73_RS03955 PF17764 3′ DNA-binding domain (3′BD) JSQ73_RS03975 PF02132 RecR protein JSQ73_RS03975 PF13662 Toprim domain JSQ73_RS03985 PF00183 Hsp90 protein JSQ73_RS04020 PF00155 Aminotransferase class I and II JSQ73_RS04030 PF01132 Elongation factor P (EF-P) OB domain JSQ73_RS04030 PF08207 Elongation factor P (EF-P) KOW-like domain JSQ73_RS04030 PF09285 Elongation factor P, C-terminal JSQ73_RS04035 PF01782 RimM N-terminal domain JSQ73_RS04035 PF05239 PRC-barrel domain JSQ73_RS04045 PF00202 Aminotransferase class-III JSQ73_RS04050 PF00512 His Kinase A (phospho-acceptor) domain JSQ73_RS04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ73_RS04050 PF13188 PAS domain JSQ73_RS04050 PF13426 PAS domain JSQ73_RS04050 PF00989 PAS fold JSQ73_RS04060 PF00814 Glycoprotease family JSQ73_RS04070 PF00005 ABC transporter JSQ73_RS04070 PF00664 ABC transporter transmembrane region JSQ73_RS04080 PF00364 Biotin-requiring enzyme JSQ73_RS04080 PF02817 e3 binding domain JSQ73_RS04080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ73_RS04100 PF06480 FtsH Extracellular JSQ73_RS04100 PF17862 AAA+ lid domain JSQ73_RS04100 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_RS04100 PF01434 Peptidase family M41 JSQ73_RS04105 PF01171 PP-loop family JSQ73_RS04110 PF00691 OmpA family JSQ73_RS04135 PF00719 Inorganic pyrophosphatase JSQ73_RS04155 PF02401 LytB protein JSQ73_RS04180 PF00436 Single-strand binding protein family JSQ73_RS04185 PF00701 Dihydrodipicolinate synthetase family JSQ73_RS04195 PF08240 Alcohol dehydrogenase GroES-like domain JSQ73_RS04195 PF00107 Zinc-binding dehydrogenase JSQ73_RS04205 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JSQ73_RS04210 PF01027 Inhibitor of apoptosis-promoting Bax1 JSQ73_RS04215 PF00266 Aminotransferase class-V JSQ73_RS04220 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JSQ73_RS04225 PF00005 ABC transporter JSQ73_RS04230 PF01521 Iron-sulphur cluster biosynthesis JSQ73_RS04235 PF01966 HD domain JSQ73_RS04235 PF13286 Phosphohydrolase-associated domain JSQ73_RS04240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JSQ73_RS04240 PF01872 RibD C-terminal domain JSQ73_RS04265 PF02632 BioY family JSQ73_RS04285 PF03989 DNA gyrase C-terminal domain, beta-propeller JSQ73_RS04285 PF00521 DNA gyrase/topoisomerase IV, subunit A JSQ73_RS04290 PF00355 Rieske [2Fe-2S] domain JSQ73_RS04290 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JSQ73_RS04300 PF01523 Putative modulator of DNA gyrase JSQ73_RS04325 PF08245 Mur ligase middle domain JSQ73_RS04325 PF02875 Mur ligase family, glutamate ligase domain JSQ73_RS04340 PF03364 Polyketide cyclase / dehydrase and lipid transport JSQ73_RS04345 PF13462 Thioredoxin JSQ73_RS04375 PF12169 DNA polymerase III subunits gamma and tau domain III JSQ73_RS04380 PF02575 YbaB/EbfC DNA-binding family JSQ73_RS04390 PF04542 Sigma-70 region 2 JSQ73_RS04390 PF04545 Sigma-70, region 4 JSQ73_RS04390 PF00140 Sigma-70 factor, region 1.2 JSQ73_RS04400 PF00712 DNA polymerase III beta subunit, N-terminal domain JSQ73_RS04400 PF02767 DNA polymerase III beta subunit, central domain JSQ73_RS04400 PF02768 DNA polymerase III beta subunit, C-terminal domain JSQ73_RS04405 PF01416 tRNA pseudouridine synthase JSQ73_RS04410 PF00154 recA bacterial DNA recombination protein JSQ73_RS04415 PF01195 Peptidyl-tRNA hydrolase JSQ73_RS04420 PF01386 Ribosomal L25p family JSQ73_RS04420 PF14693 Ribosomal protein TL5, C-terminal domain JSQ73_RS04430 PF01795 MraW methylase family JSQ73_RS04435 PF00083 Sugar (and other) transporter JSQ73_RS04445 PF02491 SHS2 domain inserted in FTSA JSQ73_RS04450 PF01327 Polypeptide deformylase JSQ73_RS04455 PF03167 Uracil DNA glycosylase superfamily JSQ73_RS04460 PF03232 Ubiquinone biosynthesis protein COQ7 JSQ73_RS04470 PF00156 Phosphoribosyl transferase domain JSQ73_RS04470 PF13537 Glutamine amidotransferase domain JSQ73_RS04480 PF03631 Virulence factor BrkB JSQ73_RS04490 PF02142 MGS-like domain JSQ73_RS04490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ73_RS04490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JSQ73_RS04495 PF01219 Prokaryotic diacylglycerol kinase JSQ73_RS04500 PF00849 RNA pseudouridylate synthase JSQ73_RS04510 PF00753 Metallo-beta-lactamase superfamily JSQ73_RS04510 PF03772 Competence protein JSQ73_RS04530 PF02223 Thymidylate kinase JSQ73_RS04540 PF00999 Sodium/hydrogen exchanger family JSQ73_RS04540 PF02254 TrkA-N domain JSQ73_RS04545 PF01842 ACT domain JSQ73_RS04545 PF00696 Amino acid kinase family JSQ73_RS04545 PF13840 ACT domain JSQ73_RS04550 PF02463 RecF/RecN/SMC N terminal domain JSQ73_RS04555 PF00578 AhpC/TSA family JSQ73_RS04560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JSQ73_RS04560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JSQ73_RS04565 PF03033 Glycosyltransferase family 28 N-terminal domain JSQ73_RS04565 PF04101 Glycosyltransferase family 28 C-terminal domain JSQ73_RS04575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JSQ73_RS04575 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_RS04595 PF01926 50S ribosome-binding GTPase JSQ73_RS04595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JSQ73_RS04605 PF01039 Carboxyl transferase domain JSQ73_RS04630 PF13186 Iron-sulfur cluster-binding domain JSQ73_RS04630 PF04055 Radical SAM superfamily JSQ73_RS04645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JSQ73_RS04645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JSQ73_RS04645 PF06827 Zinc finger found in FPG and IleRS JSQ73_RS04650 PF01243 Pyridoxamine 5'-phosphate oxidase JSQ73_RS04650 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JSQ73_RS04660 PF00528 Binding-protein-dependent transport system inner membrane component JSQ73_RS04665 PF01245 Ribosomal protein L19 JSQ73_RS04670 PF01746 tRNA (Guanine-1)-methyltransferase JSQ73_RS04675 PF01259 SAICAR synthetase JSQ73_RS04680 PF02769 AIR synthase related protein, C-terminal domain JSQ73_RS04680 PF00586 AIR synthase related protein, N-terminal domain JSQ73_RS04705 PF01351 Ribonuclease HII JSQ73_RS04710 PF00953 Glycosyl transferase family 4 JSQ73_RS04720 PF02245 Methylpurine-DNA glycosylase (MPG) JSQ73_RS04725 PF10609 NUBPL iron-transfer P-loop NTPase JSQ73_RS04745 PF00579 tRNA synthetases class I (W and Y) JSQ73_RS04760 PF00293 NUDIX domain JSQ73_RS04765 PF01026 TatD related DNase JSQ73_RS04770 PF00056 lactate/malate dehydrogenase, NAD binding domain JSQ73_RS04770 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JSQ73_RS04775 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JSQ73_RS04780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JSQ73_RS04785 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JSQ73_RS04790 PF01230 HIT domain JSQ73_RS04805 PF02875 Mur ligase family, glutamate ligase domain JSQ73_RS04805 PF08245 Mur ligase middle domain JSQ73_RS04805 PF01225 Mur ligase family, catalytic domain JSQ73_RS04810 PF01370 NAD dependent epimerase/dehydratase family JSQ73_RS04810 PF08338 Domain of unknown function (DUF1731) JSQ73_RS04820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JSQ73_RS04820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JSQ73_RS04825 PF02504 Fatty acid synthesis protein JSQ73_RS04830 PF01783 Ribosomal L32p protein family JSQ73_RS04835 PF02405 Permease MlaE JSQ73_RS04840 PF00005 ABC transporter JSQ73_RS04840 PF08402 TOBE domain JSQ73_RS04845 PF02978 Signal peptide binding domain JSQ73_RS04845 PF00448 SRP54-type protein, GTPase domain JSQ73_RS04845 PF02881 SRP54-type protein, helical bundle domain JSQ73_RS04860 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ73_RS04865 PF07977 FabA-like domain JSQ73_RS04875 PF07244 Surface antigen variable number repeat JSQ73_RS04875 PF01103 Surface antigen JSQ73_RS04880 PF17820 PDZ domain JSQ73_RS04880 PF02163 Peptidase family M50 JSQ73_RS04895 PF00216 Bacterial DNA-binding protein JSQ73_RS04900 PF00575 S1 RNA binding domain JSQ73_RS04905 PF02390 Putative methyltransferase JSQ73_RS04960 PF01541 GIY-YIG catalytic domain JSQ73_RS04975 PF00285 Citrate synthase, C-terminal domain JSQ73_RS04980 PF01649 Ribosomal protein S20 JSQ73_RS04990 PF02899 Phage integrase, N-terminal SAM-like domain JSQ73_RS04990 PF00589 Phage integrase family JSQ73_RS05000 PF01594 AI-2E family transporter JSQ73_RS05010 PF12146 Serine aminopeptidase, S33 JSQ73_RS05020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JSQ73_RS05020 PF02542 YgbB family JSQ73_RS05025 PF02195 ParB-like nuclease domain JSQ73_RS05025 PF17762 HTH domain found in ParB protein JSQ73_RS05030 PF13614 AAA domain JSQ73_RS05035 PF00072 Response regulator receiver domain JSQ73_RS05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ73_RS05035 PF00512 His Kinase A (phospho-acceptor) domain JSQ73_RS05035 PF08448 PAS fold JSQ73_RS05035 PF13188 PAS domain JSQ73_RS05040 PF01218 Coproporphyrinogen III oxidase JSQ73_RS05065 PF04452 RNA methyltransferase JSQ73_RS05080 PF08442 ATP-grasp domain JSQ73_RS05080 PF00549 CoA-ligase JSQ73_RS05085 PF00549 CoA-ligase JSQ73_RS05085 PF02629 CoA binding domain JSQ73_RS05090 PF01678 Diaminopimelate epimerase JSQ73_RS05125 PF13180 PDZ domain JSQ73_RS05130 PF01145 SPFH domain / Band 7 family JSQ73_RS05135 PF01145 SPFH domain / Band 7 family JSQ73_RS05140 PF01119 DNA mismatch repair protein, C-terminal domain JSQ73_RS05140 PF08676 MutL C terminal dimerisation domain JSQ73_RS05145 PF00731 AIR carboxylase JSQ73_RS05155 PF01192 RNA polymerase Rpb6 JSQ73_RS05165 PF03334 Na+/H+ antiporter subunit JSQ73_RS05170 PF13244 Domain of unknown function (DUF4040) JSQ73_RS05170 PF00361 Proton-conducting membrane transporter JSQ73_RS05170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JSQ73_RS05180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JSQ73_RS05185 PF04545 Sigma-70, region 4 JSQ73_RS05185 PF04539 Sigma-70 region 3 JSQ73_RS05185 PF04546 Sigma-70, non-essential region JSQ73_RS05185 PF03979 Sigma-70 factor, region 1.1 JSQ73_RS05185 PF00140 Sigma-70 factor, region 1.2 JSQ73_RS05185 PF04542 Sigma-70 region 2 JSQ73_RS05215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JSQ73_RS05220 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JSQ73_RS05230 PF00483 Nucleotidyl transferase JSQ73_RS05230 PF01050 Mannose-6-phosphate isomerase JSQ73_RS05235 PF00483 Nucleotidyl transferase JSQ73_RS05235 PF01050 Mannose-6-phosphate isomerase JSQ73_RS05240 PF12704 MacB-like periplasmic core domain JSQ73_RS05240 PF02687 FtsX-like permease family JSQ73_RS05270 PF01791 DeoC/LacD family aldolase JSQ73_RS05280 PF01180 Dihydroorotate dehydrogenase JSQ73_RS05285 PF14622 Ribonuclease-III-like JSQ73_RS05285 PF00035 Double-stranded RNA binding motif JSQ73_RS05290 PF02630 SCO1/SenC JSQ73_RS05295 PF00929 Exonuclease JSQ73_RS05305 PF02556 Preprotein translocase subunit SecB JSQ73_RS05310 PF00330 Aconitase family (aconitate hydratase) JSQ73_RS05310 PF00694 Aconitase C-terminal domain JSQ73_RS05315 PF00171 Aldehyde dehydrogenase family JSQ73_RS05315 PF01619 Proline dehydrogenase JSQ73_RS05315 PF14850 DNA-binding domain of Proline dehydrogenase JSQ73_RS05315 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JSQ73_RS05325 PF00883 Cytosol aminopeptidase family, catalytic domain JSQ73_RS05325 PF02789 Cytosol aminopeptidase family, N-terminal domain JSQ73_RS05335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JSQ73_RS05335 PF00384 Molybdopterin oxidoreductase JSQ73_RS05335 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JSQ73_RS05345 PF00146 NADH dehydrogenase JSQ73_RS05350 PF00490 Delta-aminolevulinic acid dehydratase JSQ73_RS05360 PF02091 Glycyl-tRNA synthetase alpha subunit JSQ73_RS05365 PF02092 Glycyl-tRNA synthetase beta subunit JSQ73_RS05365 PF05746 DALR anticodon binding domain JSQ73_RS05370 PF01541 GIY-YIG catalytic domain JSQ73_RS05370 PF02151 UvrB/uvrC motif JSQ73_RS05370 PF08459 UvrC Helix-hairpin-helix N-terminal JSQ73_RS05380 PF00588 SpoU rRNA Methylase family JSQ73_RS05380 PF08032 RNA 2'-O ribose methyltransferase substrate binding JSQ73_RS05420 PF01545 Cation efflux family JSQ73_RS05460 PF17755 UvrA DNA-binding domain JSQ73_RS05460 PF17760 UvrA interaction domain JSQ73_RS05500 PF02660 Glycerol-3-phosphate acyltransferase JSQ73_RS05505 PF01235 Sodium:alanine symporter family JSQ73_RS05510 PF01235 Sodium:alanine symporter family JSQ73_RS05515 PF01066 CDP-alcohol phosphatidyltransferase JSQ73_RS05520 PF02666 Phosphatidylserine decarboxylase JSQ73_RS05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ73_RS05535 PF01751 Toprim domain JSQ73_RS05535 PF00204 DNA gyrase B JSQ73_RS05535 PF00986 DNA gyrase B subunit, carboxyl terminus JSQ73_RS05540 PF01425 Amidase JSQ73_RS05545 PF00476 DNA polymerase family A JSQ73_RS05545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JSQ73_RS05545 PF01367 5'-3' exonuclease, C-terminal SAM fold JSQ73_RS05580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JSQ73_RS05580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JSQ73_RS05580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JSQ73_RS05580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JSQ73_RS05590 PF00677 Lumazine binding domain JSQ73_RS05615 PF01409 tRNA synthetases class II core domain (F) JSQ73_RS05615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JSQ73_RS05620 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_RS05620 PF14602 Hexapeptide repeat of succinyl-transferase JSQ73_RS05620 PF12804 MobA-like NTP transferase domain JSQ73_RS05630 PF00829 Ribosomal prokaryotic L21 protein JSQ73_RS05635 PF01016 Ribosomal L27 protein JSQ73_RS05645 PF02773 S-adenosylmethionine synthetase, C-terminal domain JSQ73_RS05645 PF02772 S-adenosylmethionine synthetase, central domain JSQ73_RS05645 PF00438 S-adenosylmethionine synthetase, N-terminal domain JSQ73_RS05650 PF03070 TENA/THI-4/PQQC family JSQ73_RS05660 PF00510 Cytochrome c oxidase subunit III JSQ73_RS05665 PF02075 Crossover junction endodeoxyribonuclease RuvC JSQ73_RS05670 PF03652 Holliday junction resolvase JSQ73_RS05675 PF02867 Ribonucleotide reductase, barrel domain JSQ73_RS05675 PF00317 Ribonucleotide reductase, all-alpha domain JSQ73_RS05675 PF03477 ATP cone domain JSQ73_RS05705 PF00825 Ribonuclease P JSQ73_RS05710 PF00468 Ribosomal protein L34 JSQ73_RS05715 PF00528 Binding-protein-dependent transport system inner membrane component JSQ73_RS05720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ73_RS05720 PF02874 ATP synthase alpha/beta family, beta-barrel domain JSQ73_RS05725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JSQ73_RS05735 PF00923 Transaldolase/Fructose-6-phosphate aldolase JSQ73_RS05745 PF00106 short chain dehydrogenase JSQ73_RS05750 PF00117 Glutamine amidotransferase class-I JSQ73_RS05750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JSQ73_RS05775 PF00529 HlyD membrane-fusion protein of T1SS JSQ73_RS05775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JSQ73_RS05780 PF00462 Glutaredoxin JSQ73_RS05790 PF01515 Phosphate acetyl/butaryl transferase JSQ73_RS05790 PF00390 Malic enzyme, N-terminal domain JSQ73_RS05790 PF03949 Malic enzyme, NAD binding domain JSQ73_RS05795 PF01066 CDP-alcohol phosphatidyltransferase JSQ73_RS05810 PF01709 Transcriptional regulator JSQ73_RS05815 PF01476 LysM domain JSQ73_RS05815 PF01551 Peptidase family M23 JSQ73_RS05815 PF08525 Opacity-associated protein A N-terminal motif JSQ73_RS05845 PF07690 Major Facilitator Superfamily JSQ73_RS05850 PF01209 ubiE/COQ5 methyltransferase family JSQ73_RS05855 PF00005 ABC transporter JSQ73_RS05855 PF00664 ABC transporter transmembrane region JSQ73_RS05875 PF00750 tRNA synthetases class I (R) JSQ73_RS05875 PF03485 Arginyl tRNA synthetase N terminal domain JSQ73_RS05875 PF05746 DALR anticodon binding domain JSQ73_RS05880 PF00005 ABC transporter JSQ73_RS05900 PF14437 MafB19-like deaminase JSQ73_RS05910 PF06418 CTP synthase N-terminus JSQ73_RS05910 PF00117 Glutamine amidotransferase class-I JSQ73_RS05920 PF00101 Ribulose bisphosphate carboxylase, small chain JSQ73_RS05920 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ73_RS05945 PF01380 SIS domain JSQ73_RS05950 PF02699 Preprotein translocase subunit JSQ73_RS05960 PF00318 Ribosomal protein S2 JSQ73_RS05965 PF00889 Elongation factor TS JSQ73_RS05970 PF00696 Amino acid kinase family JSQ73_RS05975 PF01765 Ribosome recycling factor JSQ73_RS05995 PF02386 Cation transport protein JSQ73_RS06000 PF00692 dUTPase JSQ73_RS06035 PF01040 UbiA prenyltransferase family JSQ73_RS06040 PF02033 Ribosome-binding factor A JSQ73_RS06045 PF11987 Translation-initiation factor 2 JSQ73_RS06045 PF00009 Elongation factor Tu GTP binding domain JSQ73_RS06045 PF04760 Translation initiation factor IF-2, N-terminal region JSQ73_RS06050 PF13184 NusA-like KH domain JSQ73_RS06050 PF08529 NusA N-terminal domain JSQ73_RS06050 PF00575 S1 RNA binding domain JSQ73_RS06070 PF00004 ATPase family associated with various cellular activities (AAA) JSQ73_RS06070 PF17862 AAA+ lid domain JSQ73_RS06070 PF01434 Peptidase family M41 JSQ73_RS06110 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JSQ73_RS06110 PF04055 Radical SAM superfamily JSQ73_RS06115 PF00830 Ribosomal L28 family JSQ73_RS06135 PF00163 Ribosomal protein S4/S9 N-terminal domain JSQ73_RS06135 PF01479 S4 domain JSQ73_RS06140 PF00456 Transketolase, thiamine diphosphate binding domain JSQ73_RS06140 PF02780 Transketolase, C-terminal domain JSQ73_RS06140 PF02779 Transketolase, pyrimidine binding domain JSQ73_RS06145 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JSQ73_RS06145 PF14572 Phosphoribosyl synthetase-associated domain JSQ73_RS06150 PF02686 Glu-tRNAGln amidotransferase C subunit JSQ73_RS06155 PF07676 WD40-like Beta Propeller Repeat JSQ73_RS06160 PF12706 Beta-lactamase superfamily domain JSQ73_RS06160 PF17770 Ribonuclease J C-terminal domain JSQ73_RS06160 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JSQ73_RS06165 PF01556 DnaJ C terminal domain JSQ73_RS06165 PF00684 DnaJ central domain JSQ73_RS06165 PF00226 DnaJ domain JSQ73_RS06180 PF02769 AIR synthase related protein, C-terminal domain JSQ73_RS06180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JSQ73_RS06180 PF00586 AIR synthase related protein, N-terminal domain JSQ73_RS06185 PF12705 PD-(D/E)XK nuclease superfamily JSQ73_RS06205 PF00206 Lyase JSQ73_RS06205 PF10415 Fumarase C C-terminus JSQ73_RS06240 PF00210 Ferritin-like domain JSQ73_RS06245 PF02104 SURF1 family JSQ73_RS06250 PF08245 Mur ligase middle domain JSQ73_RS06250 PF02875 Mur ligase family, glutamate ligase domain JSQ73_RS06250 PF01225 Mur ligase family, catalytic domain JSQ73_RS06255 PF00113 Enolase, C-terminal TIM barrel domain JSQ73_RS06255 PF03952 Enolase, N-terminal domain JSQ73_RS06260 PF01018 GTP1/OBG JSQ73_RS06260 PF01926 50S ribosome-binding GTPase JSQ73_RS06280 PF02325 YGGT family JSQ73_RS06285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JSQ73_RS06285 PF17854 FtsK alpha domain JSQ73_RS06285 PF09397 Ftsk gamma domain JSQ73_RS06285 PF01580 FtsK/SpoIIIE family JSQ73_RS06300 PF04551 GcpE protein JSQ73_RS06305 PF00226 DnaJ domain JSQ73_RS06305 PF01556 DnaJ C terminal domain JSQ73_RS06305 PF00684 DnaJ central domain JSQ73_RS06315 PF04002 RadC-like JAB domain JSQ73_RS06330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JSQ73_RS06330 PF01578 Cytochrome C assembly protein JSQ73_RS06355 PF01624 MutS domain I JSQ73_RS06355 PF05188 MutS domain II JSQ73_RS06355 PF05192 MutS domain III JSQ73_RS06355 PF05190 MutS family domain IV JSQ73_RS06355 PF00488 MutS domain V JSQ73_RS06365 PF00152 tRNA synthetases class II (D, K and N) JSQ73_RS06365 PF01336 OB-fold nucleic acid binding domain JSQ73_RS06365 PF02938 GAD domain JSQ73_RS06370 PF01183 Glycosyl hydrolases family 25 JSQ73_RS06375 PF08946 Osmosensory transporter coiled coil JSQ73_RS06375 PF00083 Sugar (and other) transporter JSQ73_RS06380 PF00849 RNA pseudouridylate synthase JSQ73_RS06380 PF01479 S4 domain JSQ73_RS06405 PF00571 CBS domain JSQ73_RS06405 PF01769 Divalent cation transporter JSQ73_RS06405 PF03448 MgtE intracellular N domain JSQ73_RS06495 PF12826 Helix-hairpin-helix motif JSQ73_RS06495 PF03120 NAD-dependent DNA ligase OB-fold domain JSQ73_RS06495 PF00533 BRCA1 C Terminus (BRCT) domain JSQ73_RS06495 PF01653 NAD-dependent DNA ligase adenylation domain JSQ73_RS06545 PF00925 GTP cyclohydrolase II JSQ73_RS06550 PF04335 VirB8 protein JSQ73_RS06565 PF00437 Type II/IV secretion system protein JSQ73_RS06570 PF02534 Type IV secretory system Conjugative DNA transfer JSQ73_RS06580 PF01131 DNA topoisomerase JSQ73_RS06580 PF01751 Toprim domain JSQ73_RS06580 PF13368 Topoisomerase C-terminal repeat JSQ73_RS06580 PF01396 Topoisomerase DNA binding C4 zinc finger JSQ73_RS06625 PF01078 Magnesium chelatase, subunit ChlI JSQ73_RS06625 PF13335 Magnesium chelatase, subunit ChlI C-terminal JSQ73_RS06630 PF13335 Magnesium chelatase, subunit ChlI C-terminal JSQ73_RS06630 PF01078 Magnesium chelatase, subunit ChlI JSQ73_RS06665 PF00873 AcrB/AcrD/AcrF family