locus-tag class description J4T77_RS00005 PF00308 Bacterial dnaA protein J4T77_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix J4T77_RS00005 PF11638 DnaA N-terminal domain J4T77_RS00020 PF00925 GTP cyclohydrolase II J4T77_RS00025 PF04335 VirB8 protein J4T77_RS00040 PF00437 Type II/IV secretion system protein J4T77_RS00045 PF02534 Type IV secretory system Conjugative DNA transfer J4T77_RS00055 PF13847 Methyltransferase domain J4T77_RS00055 PF17827 PrmC N-terminal domain J4T77_RS00065 PF00164 Ribosomal protein S12/S23 J4T77_RS00070 PF00177 Ribosomal protein S7p/S5e J4T77_RS00075 PF03144 Elongation factor Tu domain 2 J4T77_RS00075 PF03764 Elongation factor G, domain IV J4T77_RS00075 PF00009 Elongation factor Tu GTP binding domain J4T77_RS00075 PF00679 Elongation factor G C-terminus J4T77_RS00075 PF14492 Elongation Factor G, domain II J4T77_RS00100 PF00467 KOW motif J4T77_RS00100 PF02357 Transcription termination factor nusG J4T77_RS00105 PF00298 Ribosomal protein L11, RNA binding domain J4T77_RS00105 PF03946 Ribosomal protein L11, N-terminal domain J4T77_RS00110 PF00687 Ribosomal protein L1p/L10e family J4T77_RS00115 PF00466 Ribosomal protein L10 J4T77_RS00120 PF00542 Ribosomal protein L7/L12 C-terminal domain J4T77_RS00120 PF16320 Ribosomal protein L7/L12 dimerisation domain J4T77_RS00125 PF04565 RNA polymerase Rpb2, domain 3 J4T77_RS00125 PF04560 RNA polymerase Rpb2, domain 7 J4T77_RS00125 PF00562 RNA polymerase Rpb2, domain 6 J4T77_RS00125 PF10385 RNA polymerase beta subunit external 1 domain J4T77_RS00125 PF04561 RNA polymerase Rpb2, domain 2 J4T77_RS00125 PF04997 RNA polymerase Rpb1, domain 1 J4T77_RS00125 PF04998 RNA polymerase Rpb1, domain 5 J4T77_RS00125 PF05000 RNA polymerase Rpb1, domain 4 J4T77_RS00125 PF04983 RNA polymerase Rpb1, domain 3 J4T77_RS00125 PF00623 RNA polymerase Rpb1, domain 2 J4T77_RS00125 PF04563 RNA polymerase beta subunit J4T77_RS00130 PF01207 Dihydrouridine synthase (Dus) J4T77_RS00140 PF02403 Seryl-tRNA synthetase N-terminal domain J4T77_RS00140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4T77_RS00145 PF02844 Phosphoribosylglycinamide synthetase, N domain J4T77_RS00145 PF02843 Phosphoribosylglycinamide synthetase, C domain J4T77_RS00145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4T77_RS00160 PF01348 Type II intron maturase J4T77_RS00160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS00175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4T77_RS00175 PF14572 Phosphoribosyl synthetase-associated domain J4T77_RS00180 PF02686 Glu-tRNAGln amidotransferase C subunit J4T77_RS00185 PF04052 TolB amino-terminal domain J4T77_RS00185 PF07676 WD40-like Beta Propeller Repeat J4T77_RS00190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4T77_RS00190 PF12706 Beta-lactamase superfamily domain J4T77_RS00190 PF17770 Ribonuclease J C-terminal domain J4T77_RS00195 PF00684 DnaJ central domain J4T77_RS00195 PF01556 DnaJ C terminal domain J4T77_RS00195 PF00226 DnaJ domain J4T77_RS00245 PF02789 Cytosol aminopeptidase family, N-terminal domain J4T77_RS00245 PF00883 Cytosol aminopeptidase family, catalytic domain J4T77_RS00255 PF00216 Bacterial DNA-binding protein J4T77_RS00265 PF01551 Peptidase family M23 J4T77_RS00270 PF13603 Leucyl-tRNA synthetase, Domain 2 J4T77_RS00270 PF09334 tRNA synthetases class I (M) J4T77_RS00270 PF00133 tRNA synthetases class I (I, L, M and V) J4T77_RS00270 PF08264 Anticodon-binding domain of tRNA J4T77_RS00285 PF13333 Integrase core domain J4T77_RS00285 PF00665 Integrase core domain J4T77_RS00285 PF13276 HTH-like domain J4T77_RS00295 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4T77_RS00305 PF00380 Ribosomal protein S9/S16 J4T77_RS00310 PF00572 Ribosomal protein L13 J4T77_RS00320 PF10691 Protein of unknown function (DUF2497) J4T77_RS00325 PF01728 FtsJ-like methyltransferase J4T77_RS00345 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS00345 PF01348 Type II intron maturase J4T77_RS00380 PF13333 Integrase core domain J4T77_RS00380 PF00665 Integrase core domain J4T77_RS00380 PF13276 HTH-like domain J4T77_RS00420 PF02355 Protein export membrane protein J4T77_RS00440 PF00571 CBS domain J4T77_RS00440 PF00478 IMP dehydrogenase / GMP reductase domain J4T77_RS00445 PF00398 Ribosomal RNA adenine dimethylase J4T77_RS00455 PF00121 Triosephosphate isomerase J4T77_RS00460 PF02481 DNA recombination-mediator protein A J4T77_RS00460 PF17782 DprA winged helix domain J4T77_RS00465 PF00037 4Fe-4S binding domain J4T77_RS00465 PF11953 Domain of unknown function (DUF3470) J4T77_RS00480 PF01820 D-ala D-ala ligase N-terminus J4T77_RS00480 PF07478 D-ala D-ala ligase C-terminus J4T77_RS00485 PF03799 Cell division protein FtsQ J4T77_RS00485 PF08478 POTRA domain, FtsQ-type J4T77_RS00490 PF07943 Penicillin-binding protein 5, C-terminal domain J4T77_RS00490 PF00768 D-alanyl-D-alanine carboxypeptidase J4T77_RS00495 PF00893 Small Multidrug Resistance protein J4T77_RS00500 PF00893 Small Multidrug Resistance protein J4T77_RS00515 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J4T77_RS00515 PF14850 DNA-binding domain of Proline dehydrogenase J4T77_RS00515 PF01619 Proline dehydrogenase J4T77_RS00515 PF00171 Aldehyde dehydrogenase family J4T77_RS00520 PF00694 Aconitase C-terminal domain J4T77_RS00520 PF00330 Aconitase family (aconitate hydratase) J4T77_RS00525 PF02556 Preprotein translocase subunit SecB J4T77_RS00535 PF00929 Exonuclease J4T77_RS00540 PF02630 SCO1/SenC J4T77_RS00550 PF00204 DNA gyrase B J4T77_RS00550 PF01751 Toprim domain J4T77_RS00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T77_RS00550 PF00986 DNA gyrase B subunit, carboxyl terminus J4T77_RS00580 PF04551 GcpE protein J4T77_RS00595 PF01580 FtsK/SpoIIIE family J4T77_RS00595 PF09397 Ftsk gamma domain J4T77_RS00595 PF17854 FtsK alpha domain J4T77_RS00595 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4T77_RS00600 PF02325 YGGT family J4T77_RS00650 PF00677 Lumazine binding domain J4T77_RS00660 PF01409 tRNA synthetases class II core domain (F) J4T77_RS00660 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4T77_RS00665 PF14602 Hexapeptide repeat of succinyl-transferase J4T77_RS00665 PF00132 Bacterial transferase hexapeptide (six repeats) J4T77_RS00665 PF12804 MobA-like NTP transferase domain J4T77_RS00670 PF00829 Ribosomal prokaryotic L21 protein J4T77_RS00675 PF01016 Ribosomal L27 protein J4T77_RS00685 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4T77_RS00685 PF02772 S-adenosylmethionine synthetase, central domain J4T77_RS00685 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4T77_RS00695 PF03070 TENA/THI-4/PQQC family J4T77_RS00705 PF00510 Cytochrome c oxidase subunit III J4T77_RS00710 PF02075 Crossover junction endodeoxyribonuclease RuvC J4T77_RS00715 PF03652 Holliday junction resolvase J4T77_RS00725 PF02934 GatB/GatE catalytic domain J4T77_RS00725 PF02637 GatB domain J4T77_RS00740 PF09190 DALR domain J4T77_RS00740 PF01406 tRNA synthetases class I (C) catalytic domain J4T77_RS00745 PF06055 Exopolysaccharide synthesis, ExoD J4T77_RS00755 PF02416 mttA/Hcf106 family J4T77_RS00760 PF00005 ABC transporter J4T77_RS00760 PF08402 TOBE domain J4T77_RS00770 PF01541 GIY-YIG catalytic domain J4T77_RS00770 PF02151 UvrB/uvrC motif J4T77_RS00770 PF08459 UvrC Helix-hairpin-helix N-terminal J4T77_RS00775 PF02092 Glycyl-tRNA synthetase beta subunit J4T77_RS00775 PF05746 DALR anticodon binding domain J4T77_RS00780 PF02091 Glycyl-tRNA synthetase alpha subunit J4T77_RS00790 PF00490 Delta-aminolevulinic acid dehydratase J4T77_RS00795 PF00146 NADH dehydrogenase J4T77_RS00800 PF00384 Molybdopterin oxidoreductase J4T77_RS00800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4T77_RS00800 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J4T77_RS00810 PF03167 Uracil DNA glycosylase superfamily J4T77_RS00815 PF01327 Polypeptide deformylase J4T77_RS00820 PF02491 SHS2 domain inserted in FTSA J4T77_RS00820 PF11983 Membrane-attachment and polymerisation-promoting switch J4T77_RS00825 PF00557 Metallopeptidase family M24 J4T77_RS00830 PF00083 Sugar (and other) transporter J4T77_RS00830 PF07690 Major Facilitator Superfamily J4T77_RS00835 PF01795 MraW methylase family J4T77_RS00850 PF01386 Ribosomal L25p family J4T77_RS00850 PF14693 Ribosomal protein TL5, C-terminal domain J4T77_RS00855 PF01195 Peptidyl-tRNA hydrolase J4T77_RS00865 PF01494 FAD binding domain J4T77_RS00875 PF10609 NUBPL iron-transfer P-loop NTPase J4T77_RS00895 PF13276 HTH-like domain J4T77_RS00895 PF00665 Integrase core domain J4T77_RS00895 PF13333 Integrase core domain J4T77_RS00910 PF01121 Dephospho-CoA kinase J4T77_RS00920 PF00570 HRDC domain J4T77_RS00920 PF01612 3'-5' exonuclease J4T77_RS00945 PF00117 Glutamine amidotransferase class-I J4T77_RS00945 PF00958 GMP synthase C terminal domain J4T77_RS00945 PF02540 NAD synthase J4T77_RS00950 PF03477 ATP cone domain J4T77_RS00950 PF02867 Ribonucleotide reductase, barrel domain J4T77_RS00950 PF00317 Ribonucleotide reductase, all-alpha domain J4T77_RS00955 PF01209 ubiE/COQ5 methyltransferase family J4T77_RS00980 PF00468 Ribosomal protein L34 J4T77_RS00985 PF00528 Binding-protein-dependent transport system inner membrane component J4T77_RS00990 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4T77_RS00990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T77_RS00995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4T77_RS01015 PF00596 Class II Aldolase and Adducin N-terminal domain J4T77_RS01025 PF00814 Glycoprotease family J4T77_RS01035 PF00268 Ribonucleotide reductase, small chain J4T77_RS01055 PF17761 DUF1016 N-terminal domain J4T77_RS01055 PF06250 YhcG PDDEXK nuclease domain J4T77_RS01065 PF02565 Recombination protein O C terminal J4T77_RS01065 PF11967 Recombination protein O N terminal J4T77_RS01075 PF00990 Diguanylate cyclase, GGDEF domain J4T77_RS01075 PF00072 Response regulator receiver domain J4T77_RS01085 PF05088 Bacterial NAD-glutamate dehydrogenase J4T77_RS01090 PF10431 C-terminal, D2-small domain, of ClpB protein J4T77_RS01090 PF02861 Clp amino terminal domain, pathogenicity island component J4T77_RS01090 PF00004 ATPase family associated with various cellular activities (AAA) J4T77_RS01090 PF17871 AAA lid domain J4T77_RS01090 PF07724 AAA domain (Cdc48 subfamily) J4T77_RS01105 PF00679 Elongation factor G C-terminus J4T77_RS01105 PF00009 Elongation factor Tu GTP binding domain J4T77_RS01105 PF03144 Elongation factor Tu domain 2 J4T77_RS01110 PF00156 Phosphoribosyl transferase domain J4T77_RS01115 PF00375 Sodium:dicarboxylate symporter family J4T77_RS01120 PF01979 Amidohydrolase family J4T77_RS01145 PF01578 Cytochrome C assembly protein J4T77_RS01145 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4T77_RS01155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS01155 PF01348 Type II intron maturase J4T77_RS01170 PF01425 Amidase J4T77_RS01175 PF04055 Radical SAM superfamily J4T77_RS01175 PF00919 Uncharacterized protein family UPF0004 J4T77_RS01200 PF03330 Lytic transglycolase J4T77_RS01205 PF01225 Mur ligase family, catalytic domain J4T77_RS01205 PF02875 Mur ligase family, glutamate ligase domain J4T77_RS01205 PF08245 Mur ligase middle domain J4T77_RS01210 PF00113 Enolase, C-terminal TIM barrel domain J4T77_RS01210 PF03952 Enolase, N-terminal domain J4T77_RS01215 PF01018 GTP1/OBG J4T77_RS01215 PF01926 50S ribosome-binding GTPase J4T77_RS01220 PF10415 Fumarase C C-terminus J4T77_RS01220 PF00206 Lyase J4T77_RS01225 PF00462 Glutaredoxin J4T77_RS01240 PF00390 Malic enzyme, N-terminal domain J4T77_RS01240 PF03949 Malic enzyme, NAD binding domain J4T77_RS01240 PF01515 Phosphate acetyl/butaryl transferase J4T77_RS01245 PF01066 CDP-alcohol phosphatidyltransferase J4T77_RS01260 PF13525 Outer membrane lipoprotein J4T77_RS01265 PF01709 Transcriptional regulator J4T77_RS01270 PF01476 LysM domain J4T77_RS01270 PF08525 Opacity-associated protein A N-terminal motif J4T77_RS01270 PF01551 Peptidase family M23 J4T77_RS01295 PF14492 Elongation Factor G, domain II J4T77_RS01295 PF00009 Elongation factor Tu GTP binding domain J4T77_RS01295 PF06421 GTP-binding protein LepA C-terminus J4T77_RS01295 PF00679 Elongation factor G C-terminus J4T77_RS01295 PF03144 Elongation factor Tu domain 2 J4T77_RS01305 PF00364 Biotin-requiring enzyme J4T77_RS01305 PF02779 Transketolase, pyrimidine binding domain J4T77_RS01305 PF02780 Transketolase, C-terminal domain J4T77_RS01310 PF00004 ATPase family associated with various cellular activities (AAA) J4T77_RS01310 PF17862 AAA+ lid domain J4T77_RS01310 PF06480 FtsH Extracellular J4T77_RS01310 PF01434 Peptidase family M41 J4T77_RS01320 PF00083 Sugar (and other) transporter J4T77_RS01320 PF07690 Major Facilitator Superfamily J4T77_RS01325 PF14437 MafB19-like deaminase J4T77_RS01330 PF06418 CTP synthase N-terminus J4T77_RS01330 PF00117 Glutamine amidotransferase class-I J4T77_RS01350 PF08264 Anticodon-binding domain of tRNA J4T77_RS01350 PF00133 tRNA synthetases class I (I, L, M and V) J4T77_RS01370 PF00004 ATPase family associated with various cellular activities (AAA) J4T77_RS01370 PF06480 FtsH Extracellular J4T77_RS01370 PF01434 Peptidase family M41 J4T77_RS01370 PF17862 AAA+ lid domain J4T77_RS01380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4T77_RS01400 PF00005 ABC transporter J4T77_RS01405 PF00528 Binding-protein-dependent transport system inner membrane component J4T77_RS01410 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4T77_RS01415 PF02863 Arginine repressor, C-terminal domain J4T77_RS01415 PF01316 Arginine repressor, DNA binding domain J4T77_RS01420 PF00902 Sec-independent protein translocase protein (TatC) J4T77_RS01425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4T77_RS01425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4T77_RS01450 PF01743 Poly A polymerase head domain J4T77_RS01450 PF12627 Probable RNA and SrmB- binding site of polymerase A J4T77_RS01450 PF13735 tRNA nucleotidyltransferase domain 2 putative J4T77_RS01460 PF06071 Protein of unknown function (DUF933) J4T77_RS01460 PF01926 50S ribosome-binding GTPase J4T77_RS01480 PF00625 Guanylate kinase J4T77_RS01490 PF00890 FAD binding domain J4T77_RS01490 PF02910 Fumarate reductase flavoprotein C-term J4T77_RS01495 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4T77_RS01505 PF00289 Biotin carboxylase, N-terminal domain J4T77_RS01505 PF02785 Biotin carboxylase C-terminal domain J4T77_RS01505 PF00364 Biotin-requiring enzyme J4T77_RS01505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4T77_RS01505 PF18140 Propionyl-coenzyme A carboxylase BT domain J4T77_RS01510 PF02628 Cytochrome oxidase assembly protein J4T77_RS01530 PF00137 ATP synthase subunit C J4T77_RS01535 PF00119 ATP synthase A chain J4T77_RS01545 PF03147 Ferredoxin-fold anticodon binding domain J4T77_RS01545 PF01588 Putative tRNA binding domain J4T77_RS01545 PF03484 tRNA synthetase B5 domain J4T77_RS01545 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4T77_RS01545 PF03483 B3/4 domain J4T77_RS01555 PF08264 Anticodon-binding domain of tRNA J4T77_RS01555 PF00133 tRNA synthetases class I (I, L, M and V) J4T77_RS01560 PF00854 POT family J4T77_RS01565 PF00919 Uncharacterized protein family UPF0004 J4T77_RS01565 PF04055 Radical SAM superfamily J4T77_RS01565 PF01938 TRAM domain J4T77_RS01570 PF03653 Uncharacterised protein family (UPF0093) J4T77_RS01575 PF00676 Dehydrogenase E1 component J4T77_RS01580 PF01479 S4 domain J4T77_RS01580 PF00849 RNA pseudouridylate synthase J4T77_RS01585 PF08946 Osmosensory transporter coiled coil J4T77_RS01585 PF00083 Sugar (and other) transporter J4T77_RS01590 PF00152 tRNA synthetases class II (D, K and N) J4T77_RS01590 PF01336 OB-fold nucleic acid binding domain J4T77_RS01590 PF02938 GAD domain J4T77_RS01600 PF00005 ABC transporter J4T77_RS01630 PF00750 tRNA synthetases class I (R) J4T77_RS01630 PF05746 DALR anticodon binding domain J4T77_RS01630 PF03485 Arginyl tRNA synthetase N terminal domain J4T77_RS01640 PF00005 ABC transporter J4T77_RS01640 PF00664 ABC transporter transmembrane region J4T77_RS01685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4T77_RS01685 PF01565 FAD binding domain J4T77_RS01690 PF03900 Porphobilinogen deaminase, C-terminal domain J4T77_RS01690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4T77_RS01700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4T77_RS01700 PF00364 Biotin-requiring enzyme J4T77_RS01700 PF02817 e3 binding domain J4T77_RS01720 PF07517 SecA DEAD-like domain J4T77_RS01720 PF02810 SEC-C motif J4T77_RS01720 PF01043 SecA preprotein cross-linking domain J4T77_RS01720 PF07516 SecA Wing and Scaffold domain J4T77_RS01740 PF08671 Anti-repressor SinI J4T77_RS01740 PF01381 Helix-turn-helix J4T77_RS01750 PF04002 RadC-like JAB domain J4T77_RS01755 PF01381 Helix-turn-helix J4T77_RS01775 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS01785 PF01098 Cell cycle protein J4T77_RS01790 PF01209 ubiE/COQ5 methyltransferase family J4T77_RS01795 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4T77_RS01795 PF04055 Radical SAM superfamily J4T77_RS01800 PF00830 Ribosomal L28 family J4T77_RS01810 PF04384 Iron-sulphur cluster assembly J4T77_RS01820 PF01479 S4 domain J4T77_RS01820 PF00163 Ribosomal protein S4/S9 N-terminal domain J4T77_RS01825 PF02780 Transketolase, C-terminal domain J4T77_RS01825 PF02779 Transketolase, pyrimidine binding domain J4T77_RS01825 PF00456 Transketolase, thiamine diphosphate binding domain J4T77_RS01845 PF07690 Major Facilitator Superfamily J4T77_RS01880 PF00692 dUTPase J4T77_RS01905 PF02386 Cation transport protein J4T77_RS01910 PF00571 CBS domain J4T77_RS01910 PF01769 Divalent cation transporter J4T77_RS01910 PF03448 MgtE intracellular N domain J4T77_RS01925 PF13276 HTH-like domain J4T77_RS01925 PF00665 Integrase core domain J4T77_RS01925 PF13333 Integrase core domain J4T77_RS01940 PF00005 ABC transporter J4T77_RS01945 PF01113 Dihydrodipicolinate reductase, N-terminus J4T77_RS01945 PF05173 Dihydrodipicolinate reductase, C-terminus J4T77_RS01965 PF00950 ABC 3 transport family J4T77_RS01975 PF00288 GHMP kinases N terminal domain J4T77_RS01975 PF08544 GHMP kinases C terminal J4T77_RS01980 PF12705 PD-(D/E)XK nuclease superfamily J4T77_RS01980 PF00580 UvrD/REP helicase N-terminal domain J4T77_RS01980 PF13361 UvrD-like helicase C-terminal domain J4T77_RS01990 PF04002 RadC-like JAB domain J4T77_RS01995 PF06271 RDD family J4T77_RS02005 PF00772 DnaB-like helicase N terminal domain J4T77_RS02005 PF03796 DnaB-like helicase C terminal domain J4T77_RS02015 PF09334 tRNA synthetases class I (M) J4T77_RS02015 PF08264 Anticodon-binding domain of tRNA J4T77_RS02025 PF08241 Methyltransferase domain J4T77_RS02035 PF08275 DNA primase catalytic core, N-terminal domain J4T77_RS02035 PF01807 CHC2 zinc finger J4T77_RS02035 PF13662 Toprim domain J4T77_RS02040 PF02661 Fic/DOC family J4T77_RS02040 PF13784 Fic/DOC family N-terminal J4T77_RS02045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T77_RS02055 PF00665 Integrase core domain J4T77_RS02055 PF13333 Integrase core domain J4T77_RS02055 PF13276 HTH-like domain J4T77_RS02075 PF00444 Ribosomal protein L36 J4T77_RS02080 PF03618 Kinase/pyrophosphorylase J4T77_RS02085 PF01578 Cytochrome C assembly protein J4T77_RS02100 PF00709 Adenylosuccinate synthetase J4T77_RS02115 PF01176 Translation initiation factor 1A / IF-1 J4T77_RS02120 PF02545 Maf-like protein J4T77_RS02135 PF01235 Sodium:alanine symporter family J4T77_RS02195 PF02371 Transposase IS116/IS110/IS902 family J4T77_RS02195 PF01548 Transposase J4T77_RS02200 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T77_RS02200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4T77_RS02210 PF04101 Glycosyltransferase family 28 C-terminal domain J4T77_RS02210 PF03033 Glycosyltransferase family 28 N-terminal domain J4T77_RS02215 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4T77_RS02215 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4T77_RS02220 PF04972 BON domain J4T77_RS02230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4T77_RS02230 PF05698 Bacterial trigger factor protein (TF) C-terminus J4T77_RS02230 PF05697 Bacterial trigger factor protein (TF) J4T77_RS02235 PF00574 Clp protease J4T77_RS02240 PF10431 C-terminal, D2-small domain, of ClpB protein J4T77_RS02240 PF07724 AAA domain (Cdc48 subfamily) J4T77_RS02240 PF06689 ClpX C4-type zinc finger J4T77_RS02245 PF00004 ATPase family associated with various cellular activities (AAA) J4T77_RS02245 PF05362 Lon protease (S16) C-terminal proteolytic domain J4T77_RS02245 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4T77_RS02255 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4T77_RS02260 PF02272 DHHA1 domain J4T77_RS02260 PF01368 DHH family J4T77_RS02260 PF17768 RecJ OB domain J4T77_RS02265 PF01571 Aminomethyltransferase folate-binding domain J4T77_RS02270 PF00166 Chaperonin 10 Kd subunit J4T77_RS02275 PF00118 TCP-1/cpn60 chaperonin family J4T77_RS02285 PF00075 RNase H J4T77_RS02290 PF01040 UbiA prenyltransferase family J4T77_RS02295 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4T77_RS02300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4T77_RS02300 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4T77_RS02305 PF00665 Integrase core domain J4T77_RS02305 PF13333 Integrase core domain J4T77_RS02305 PF13276 HTH-like domain J4T77_RS02345 PF13333 Integrase core domain J4T77_RS02345 PF13276 HTH-like domain J4T77_RS02345 PF00665 Integrase core domain J4T77_RS02365 PF01467 Cytidylyltransferase-like J4T77_RS02380 PF01255 Putative undecaprenyl diphosphate synthase J4T77_RS02390 PF01765 Ribosome recycling factor J4T77_RS02395 PF00696 Amino acid kinase family J4T77_RS02400 PF00889 Elongation factor TS J4T77_RS02405 PF00318 Ribosomal protein S2 J4T77_RS02415 PF02699 Preprotein translocase subunit J4T77_RS02420 PF01380 SIS domain J4T77_RS02445 PF01348 Type II intron maturase J4T77_RS02445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS02530 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4T77_RS02545 PF13276 HTH-like domain J4T77_RS02545 PF00665 Integrase core domain J4T77_RS02545 PF13333 Integrase core domain J4T77_RS02550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4T77_RS02550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4T77_RS02555 PF02441 Flavoprotein J4T77_RS02560 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) J4T77_RS02565 PF01595 Cyclin M transmembrane N-terminal domain J4T77_RS02565 PF03471 Transporter associated domain J4T77_RS02565 PF00571 CBS domain J4T77_RS02570 PF00202 Aminotransferase class-III J4T77_RS02575 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J4T77_RS02585 PF02646 RmuC family J4T77_RS02605 PF07690 Major Facilitator Superfamily J4T77_RS02610 PF03462 PCRF domain J4T77_RS02610 PF00472 RF-1 domain J4T77_RS02615 PF01926 50S ribosome-binding GTPase J4T77_RS02620 PF00696 Amino acid kinase family J4T77_RS02625 PF00692 dUTPase J4T77_RS02660 PF01029 NusB family J4T77_RS02665 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4T77_RS02670 PF14849 YidC periplasmic domain J4T77_RS02670 PF02096 60Kd inner membrane protein J4T77_RS02680 PF07549 SecD/SecF GG Motif J4T77_RS02680 PF02355 Protein export membrane protein J4T77_RS02695 PF01348 Type II intron maturase J4T77_RS02695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS02720 PF00023 Ankyrin repeat J4T77_RS02860 PF01734 Patatin-like phospholipase J4T77_RS02875 PF00872 Transposase, Mutator family J4T77_RS02925 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS02935 PF13333 Integrase core domain J4T77_RS02935 PF00665 Integrase core domain J4T77_RS02935 PF13276 HTH-like domain J4T77_RS02950 PF00529 HlyD membrane-fusion protein of T1SS J4T77_RS02950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4T77_RS02975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4T77_RS02975 PF00925 GTP cyclohydrolase II J4T77_RS02980 PF01272 Transcription elongation factor, GreA/GreB, C-term J4T77_RS02980 PF03449 Transcription elongation factor, N-terminal J4T77_RS02985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T77_RS02985 PF00306 ATP synthase alpha/beta chain, C terminal domain J4T77_RS02985 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4T77_RS02990 PF00213 ATP synthase delta (OSCP) subunit J4T77_RS02995 PF02021 Uncharacterised protein family UPF0102 J4T77_RS03000 PF01196 Ribosomal protein L17 J4T77_RS03005 PF01000 RNA polymerase Rpb3/RpoA insert domain J4T77_RS03005 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4T77_RS03005 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4T77_RS03010 PF00411 Ribosomal protein S11 J4T77_RS03015 PF00416 Ribosomal protein S13/S18 J4T77_RS03025 PF00344 SecY translocase J4T77_RS03030 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4T77_RS03035 PF00333 Ribosomal protein S5, N-terminal domain J4T77_RS03035 PF03719 Ribosomal protein S5, C-terminal domain J4T77_RS03040 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4T77_RS03045 PF00347 Ribosomal protein L6 J4T77_RS03050 PF00410 Ribosomal protein S8 J4T77_RS03055 PF00253 Ribosomal protein S14p/S29e J4T77_RS03060 PF00673 ribosomal L5P family C-terminus J4T77_RS03060 PF00281 Ribosomal protein L5 J4T77_RS03065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4T77_RS03070 PF00238 Ribosomal protein L14p/L23e J4T77_RS03075 PF00366 Ribosomal protein S17 J4T77_RS03080 PF00831 Ribosomal L29 protein J4T77_RS03085 PF00252 Ribosomal protein L16p/L10e J4T77_RS03090 PF07650 KH domain J4T77_RS03090 PF00189 Ribosomal protein S3, C-terminal domain J4T77_RS03095 PF00237 Ribosomal protein L22p/L17e J4T77_RS03100 PF00203 Ribosomal protein S19 J4T77_RS03105 PF03947 Ribosomal Proteins L2, C-terminal domain J4T77_RS03105 PF00181 Ribosomal Proteins L2, RNA binding domain J4T77_RS03110 PF00276 Ribosomal protein L23 J4T77_RS03115 PF00573 Ribosomal protein L4/L1 family J4T77_RS03120 PF00297 Ribosomal protein L3 J4T77_RS03125 PF00338 Ribosomal protein S10p/S20e J4T77_RS03145 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4T77_RS03145 PF00117 Glutamine amidotransferase class-I J4T77_RS03175 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS03175 PF01348 Type II intron maturase J4T77_RS03185 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J4T77_RS03200 PF00391 PEP-utilising enzyme, mobile domain J4T77_RS03200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4T77_RS03200 PF02896 PEP-utilising enzyme, TIM barrel domain J4T77_RS03225 PF01348 Type II intron maturase J4T77_RS03225 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS03545 PF02796 Helix-turn-helix domain of resolvase J4T77_RS03545 PF00239 Resolvase, N terminal domain J4T77_RS03625 PF02371 Transposase IS116/IS110/IS902 family J4T77_RS03625 PF01548 Transposase J4T77_RS03640 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS03640 PF01348 Type II intron maturase J4T77_RS03655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4T77_RS03655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4T77_RS03655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4T77_RS03655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4T77_RS03670 PF01548 Transposase J4T77_RS03670 PF02371 Transposase IS116/IS110/IS902 family J4T77_RS03675 PF00814 Glycoprotease family J4T77_RS03690 PF00266 Aminotransferase class-V J4T77_RS03695 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J4T77_RS03705 PF00005 ABC transporter J4T77_RS03710 PF01521 Iron-sulphur cluster biosynthesis J4T77_RS03715 PF01966 HD domain J4T77_RS03715 PF13286 Phosphohydrolase-associated domain J4T77_RS03720 PF01872 RibD C-terminal domain J4T77_RS03720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4T77_RS03730 PF00834 Ribulose-phosphate 3 epimerase family J4T77_RS03740 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J4T77_RS03740 PF14602 Hexapeptide repeat of succinyl-transferase J4T77_RS03740 PF00132 Bacterial transferase hexapeptide (six repeats) J4T77_RS03785 PF03717 Penicillin-binding Protein dimerisation domain J4T77_RS03785 PF00905 Penicillin binding protein transpeptidase domain J4T77_RS03790 PF03422 Carbohydrate binding module (family 6) J4T77_RS03790 PF00457 Glycosyl hydrolases family 11 J4T77_RS03790 PF01522 Polysaccharide deacetylase J4T77_RS03795 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4T77_RS03795 PF01078 Magnesium chelatase, subunit ChlI J4T77_RS03805 PF00091 Tubulin/FtsZ family, GTPase domain J4T77_RS03805 PF12327 FtsZ family, C-terminal domain J4T77_RS03820 PF02130 Uncharacterized protein family UPF0054 J4T77_RS03825 PF13085 2Fe-2S iron-sulfur cluster binding domain J4T77_RS03840 PF04608 Phosphatidylglycerophosphatase A J4T77_RS03845 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4T77_RS03845 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4T77_RS03850 PF00072 Response regulator receiver domain J4T77_RS03850 PF00486 Transcriptional regulatory protein, C terminal J4T77_RS03870 PF01702 Queuine tRNA-ribosyltransferase J4T77_RS03880 PF00675 Insulinase (Peptidase family M16) J4T77_RS03880 PF05193 Peptidase M16 inactive domain J4T77_RS03885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4T77_RS03885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4T77_RS03900 PF01654 Cytochrome bd terminal oxidase subunit I J4T77_RS03905 PF02322 Cytochrome bd terminal oxidase subunit II J4T77_RS03910 PF07650 KH domain J4T77_RS03910 PF01926 50S ribosome-binding GTPase J4T77_RS03950 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T77_RS03950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4T77_RS03955 PF02899 Phage integrase, N-terminal SAM-like domain J4T77_RS03955 PF00589 Phage integrase family J4T77_RS03975 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T77_RS03980 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4T77_RS03980 PF00578 AhpC/TSA family J4T77_RS03990 PF00462 Glutaredoxin J4T77_RS03995 PF06574 FAD synthetase J4T77_RS03995 PF01687 Riboflavin kinase J4T77_RS04000 PF01252 Signal peptidase (SPase) II J4T77_RS04005 PF00675 Insulinase (Peptidase family M16) J4T77_RS04005 PF05193 Peptidase M16 inactive domain J4T77_RS04015 PF00551 Formyl transferase J4T77_RS04060 PF17757 UvrB interaction domain J4T77_RS04060 PF02151 UvrB/uvrC motif J4T77_RS04060 PF04851 Type III restriction enzyme, res subunit J4T77_RS04060 PF12344 Ultra-violet resistance protein B J4T77_RS04060 PF00271 Helicase conserved C-terminal domain J4T77_RS04075 PF01548 Transposase J4T77_RS04075 PF02371 Transposase IS116/IS110/IS902 family J4T77_RS04080 PF03918 Cytochrome C biogenesis protein J4T77_RS04090 PF00111 2Fe-2S iron-sulfur cluster binding domain J4T77_RS04095 PF00270 DEAD/DEAH box helicase J4T77_RS04095 PF00271 Helicase conserved C-terminal domain J4T77_RS04095 PF17191 RecG wedge domain J4T77_RS04115 PF01300 Telomere recombination J4T77_RS04135 PF00361 Proton-conducting membrane transporter J4T77_RS04135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4T77_RS04135 PF13244 Domain of unknown function (DUF4040) J4T77_RS04145 PF01648 4'-phosphopantetheinyl transferase superfamily J4T77_RS04150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4T77_RS04150 PF03129 Anticodon binding domain J4T77_RS04175 PF00034 Cytochrome c J4T77_RS04185 PF00579 tRNA synthetases class I (W and Y) J4T77_RS04190 PF01025 GrpE J4T77_RS04195 PF00348 Polyprenyl synthetase J4T77_RS04200 PF00886 Ribosomal protein S16 J4T77_RS04205 PF00639 PPIC-type PPIASE domain J4T77_RS04215 PF07498 Rho termination factor, N-terminal domain J4T77_RS04215 PF07497 Rho termination factor, RNA-binding domain J4T77_RS04215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4T77_RS04230 PF00180 Isocitrate/isopropylmalate dehydrogenase J4T77_RS04230 PF18324 Hypothetical protein TT1725 J4T77_RS04245 PF00730 HhH-GPD superfamily base excision DNA repair protein J4T77_RS04245 PF10576 Iron-sulfur binding domain of endonuclease III J4T77_RS04245 PF00633 Helix-hairpin-helix motif J4T77_RS04250 PF07687 Peptidase dimerisation domain J4T77_RS04250 PF01546 Peptidase family M20/M25/M40 J4T77_RS04255 PF13685 Iron-containing alcohol dehydrogenase J4T77_RS04265 PF10397 Adenylosuccinate lyase C-terminus J4T77_RS04265 PF00206 Lyase J4T77_RS04275 PF01281 Ribosomal protein L9, N-terminal domain J4T77_RS04275 PF03948 Ribosomal protein L9, C-terminal domain J4T77_RS04280 PF01084 Ribosomal protein S18 J4T77_RS04285 PF01250 Ribosomal protein S6 J4T77_RS04290 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4T77_RS04290 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4T77_RS04290 PF02811 PHP domain J4T77_RS04290 PF14579 Helix-hairpin-helix motif J4T77_RS04295 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4T77_RS04300 PF01653 NAD-dependent DNA ligase adenylation domain J4T77_RS04300 PF03120 NAD-dependent DNA ligase OB-fold domain J4T77_RS04300 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4T77_RS04300 PF12826 Helix-hairpin-helix motif J4T77_RS04300 PF00533 BRCA1 C Terminus (BRCT) domain J4T77_RS04305 PF00701 Dihydrodipicolinate synthetase family J4T77_RS04310 PF00436 Single-strand binding protein family J4T77_RS04335 PF00664 ABC transporter transmembrane region J4T77_RS04335 PF00005 ABC transporter J4T77_RS04340 PF01790 Prolipoprotein diacylglyceryl transferase J4T77_RS04345 PF01668 SmpB protein J4T77_RS04370 PF13180 PDZ domain J4T77_RS04375 PF01145 SPFH domain / Band 7 family J4T77_RS04380 PF01145 SPFH domain / Band 7 family J4T77_RS04415 PF08245 Mur ligase middle domain J4T77_RS04440 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J4T77_RS04445 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J4T77_RS04450 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J4T77_RS04455 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J4T77_RS04460 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J4T77_RS04470 PF01921 tRNA synthetases class I (K) J4T77_RS04480 PF02272 DHHA1 domain J4T77_RS04480 PF01411 tRNA synthetases class II (A) J4T77_RS04480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4T77_RS04490 PF01632 Ribosomal protein L35 J4T77_RS04495 PF00453 Ribosomal protein L20 J4T77_RS04500 PF02911 Formyl transferase, C-terminal domain J4T77_RS04500 PF00551 Formyl transferase J4T77_RS04505 PF01808 AICARFT/IMPCHase bienzyme J4T77_RS04505 PF02142 MGS-like domain J4T77_RS04515 PF01676 Metalloenzyme superfamily J4T77_RS04515 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4T77_RS04520 PF00698 Acyl transferase domain J4T77_RS04525 PF01197 Ribosomal protein L31 J4T77_RS04530 PF01513 ATP-NAD kinase J4T77_RS04580 PF00085 Thioredoxin J4T77_RS04590 PF03070 TENA/THI-4/PQQC family J4T77_RS04600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4T77_RS04600 PF00809 Pterin binding enzyme J4T77_RS04605 PF00186 Dihydrofolate reductase J4T77_RS04615 PF18073 Rubredoxin metal binding domain J4T77_RS04620 PF00448 SRP54-type protein, GTPase domain J4T77_RS04620 PF02881 SRP54-type protein, helical bundle domain J4T77_RS04625 PF01592 NifU-like N terminal domain J4T77_RS04630 PF01521 Iron-sulphur cluster biosynthesis J4T77_RS04635 PF07743 HSCB C-terminal oligomerisation domain J4T77_RS04640 PF00012 Hsp70 protein J4T77_RS04645 PF10502 Signal peptidase, peptidase S26 J4T77_RS04650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4T77_RS04650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4T77_RS04680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS04680 PF01348 Type II intron maturase J4T77_RS04695 PF02660 Glycerol-3-phosphate acyltransferase J4T77_RS04700 PF01235 Sodium:alanine symporter family J4T77_RS04705 PF01235 Sodium:alanine symporter family J4T77_RS04710 PF01066 CDP-alcohol phosphatidyltransferase J4T77_RS04715 PF02666 Phosphatidylserine decarboxylase J4T77_RS04720 PF00154 recA bacterial DNA recombination protein J4T77_RS04725 PF00684 DnaJ central domain J4T77_RS04725 PF00226 DnaJ domain J4T77_RS04725 PF01556 DnaJ C terminal domain J4T77_RS04730 PF02875 Mur ligase family, glutamate ligase domain J4T77_RS04730 PF08245 Mur ligase middle domain J4T77_RS04745 PF03364 Polyketide cyclase / dehydrase and lipid transport J4T77_RS04750 PF13462 Thioredoxin J4T77_RS04780 PF12169 DNA polymerase III subunits gamma and tau domain III J4T77_RS04785 PF02575 YbaB/EbfC DNA-binding family J4T77_RS04790 PF13505 Outer membrane protein beta-barrel domain J4T77_RS04795 PF00140 Sigma-70 factor, region 1.2 J4T77_RS04795 PF04542 Sigma-70 region 2 J4T77_RS04795 PF04545 Sigma-70, region 4 J4T77_RS04805 PF00712 DNA polymerase III beta subunit, N-terminal domain J4T77_RS04805 PF02767 DNA polymerase III beta subunit, central domain J4T77_RS04805 PF02768 DNA polymerase III beta subunit, C-terminal domain J4T77_RS04810 PF01416 tRNA pseudouridine synthase J4T77_RS04820 PF00032 Cytochrome b(C-terminal)/b6/petD J4T77_RS04820 PF00033 Cytochrome b/b6/petB J4T77_RS04820 PF02167 Cytochrome C1 family J4T77_RS04825 PF00032 Cytochrome b(C-terminal)/b6/petD J4T77_RS04825 PF00033 Cytochrome b/b6/petB J4T77_RS04830 PF00226 DnaJ domain J4T77_RS04830 PF01556 DnaJ C terminal domain J4T77_RS04830 PF00684 DnaJ central domain J4T77_RS04840 PF00226 DnaJ domain J4T77_RS04840 PF01556 DnaJ C terminal domain J4T77_RS04840 PF00684 DnaJ central domain J4T77_RS04850 PF13393 Histidyl-tRNA synthetase J4T77_RS04850 PF03129 Anticodon binding domain J4T77_RS04855 PF01975 Survival protein SurE J4T77_RS04865 PF02881 SRP54-type protein, helical bundle domain J4T77_RS04865 PF02978 Signal peptide binding domain J4T77_RS04865 PF00448 SRP54-type protein, GTPase domain J4T77_RS04875 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T77_RS04880 PF07977 FabA-like domain J4T77_RS04890 PF01103 Surface antigen J4T77_RS04890 PF07244 Surface antigen variable number repeat J4T77_RS04895 PF17820 PDZ domain J4T77_RS04895 PF02163 Peptidase family M50 J4T77_RS04910 PF00216 Bacterial DNA-binding protein J4T77_RS04915 PF00575 S1 RNA binding domain J4T77_RS04920 PF02390 Putative methyltransferase J4T77_RS04930 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4T77_RS04950 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4T77_RS04950 PF01926 50S ribosome-binding GTPase J4T77_RS04960 PF03232 Ubiquinone biosynthesis protein COQ7 J4T77_RS05015 PF08338 Domain of unknown function (DUF1731) J4T77_RS05015 PF01370 NAD dependent epimerase/dehydratase family J4T77_RS05020 PF01225 Mur ligase family, catalytic domain J4T77_RS05020 PF02875 Mur ligase family, glutamate ligase domain J4T77_RS05020 PF08245 Mur ligase middle domain J4T77_RS05035 PF01230 HIT domain J4T77_RS05040 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J4T77_RS05045 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J4T77_RS05050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J4T77_RS05055 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4T77_RS05055 PF00056 lactate/malate dehydrogenase, NAD binding domain J4T77_RS05060 PF01026 TatD related DNase J4T77_RS05065 PF00293 NUDIX domain J4T77_RS05085 PF00579 tRNA synthetases class I (W and Y) J4T77_RS05105 PF01330 RuvA N terminal domain J4T77_RS05105 PF07499 RuvA, C-terminal domain J4T77_RS05110 PF17864 RuvB AAA lid domain J4T77_RS05110 PF05491 RuvB C-terminal winged helix domain J4T77_RS05110 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4T77_RS05125 PF02245 Methylpurine-DNA glycosylase (MPG) J4T77_RS05130 PF13537 Glutamine amidotransferase domain J4T77_RS05130 PF00156 Phosphoribosyl transferase domain J4T77_RS05135 PF01098 Cell cycle protein J4T77_RS05140 PF00361 Proton-conducting membrane transporter J4T77_RS05160 PF01351 Ribonuclease HII J4T77_RS05165 PF00953 Glycosyl transferase family 4 J4T77_RS05180 PF08240 Alcohol dehydrogenase GroES-like domain J4T77_RS05180 PF00107 Zinc-binding dehydrogenase J4T77_RS05185 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J4T77_RS05190 PF01027 Inhibitor of apoptosis-promoting Bax1 J4T77_RS05195 PF00588 SpoU rRNA Methylase family J4T77_RS05195 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4T77_RS05205 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4T77_RS05205 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4T77_RS05225 PF13520 Amino acid permease J4T77_RS05250 PF00696 Amino acid kinase family J4T77_RS05250 PF01842 ACT domain J4T77_RS05250 PF13840 ACT domain J4T77_RS05265 PF00580 UvrD/REP helicase N-terminal domain J4T77_RS05265 PF13361 UvrD-like helicase C-terminal domain J4T77_RS05275 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J4T77_RS05280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4T77_RS05285 PF00361 Proton-conducting membrane transporter J4T77_RS05285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4T77_RS05290 PF00361 Proton-conducting membrane transporter J4T77_RS05295 PF00361 Proton-conducting membrane transporter J4T77_RS05300 PF02237 Biotin protein ligase C terminal domain J4T77_RS05300 PF08279 HTH domain J4T77_RS05300 PF03099 Biotin/lipoate A/B protein ligase family J4T77_RS05300 PF08279 HTH domain J4T77_RS05300 PF03099 Biotin/lipoate A/B protein ligase family J4T77_RS05300 PF02237 Biotin protein ligase C terminal domain J4T77_RS05310 PF03100 CcmE J4T77_RS05335 PF01348 Type II intron maturase J4T77_RS05335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS05340 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS05350 PF01545 Cation efflux family J4T77_RS05370 PF00464 Serine hydroxymethyltransferase J4T77_RS05395 PF00155 Aminotransferase class I and II J4T77_RS05400 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4T77_RS05405 PF03471 Transporter associated domain J4T77_RS05405 PF00571 CBS domain J4T77_RS05420 PF02769 AIR synthase related protein, C-terminal domain J4T77_RS05420 PF00586 AIR synthase related protein, N-terminal domain J4T77_RS05425 PF01259 SAICAR synthetase J4T77_RS05430 PF01746 tRNA (Guanine-1)-methyltransferase J4T77_RS05435 PF01245 Ribosomal protein L19 J4T77_RS05445 PF00528 Binding-protein-dependent transport system inner membrane component J4T77_RS05460 PF17676 LD-carboxypeptidase C-terminal domain J4T77_RS05460 PF02016 LD-carboxypeptidase N-terminal domain J4T77_RS05465 PF03099 Biotin/lipoate A/B protein ligase family J4T77_RS05480 PF04860 Phage portal protein J4T77_RS05490 PF03023 Lipid II flippase MurJ J4T77_RS05500 PF01134 Glucose inhibited division protein A J4T77_RS05500 PF13932 GidA associated domain J4T77_RS05505 PF01321 Creatinase/Prolidase N-terminal domain J4T77_RS05505 PF00557 Metallopeptidase family M24 J4T77_RS05535 PF13276 HTH-like domain J4T77_RS05535 PF13333 Integrase core domain J4T77_RS05535 PF00665 Integrase core domain J4T77_RS05545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4T77_RS05545 PF00476 DNA polymerase family A J4T77_RS05545 PF01367 5'-3' exonuclease, C-terminal SAM fold J4T77_RS05575 PF01523 Putative modulator of DNA gyrase J4T77_RS05585 PF00266 Aminotransferase class-V J4T77_RS05600 PF01348 Type II intron maturase J4T77_RS05600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS05620 PF00586 AIR synthase related protein, N-terminal domain J4T77_RS05620 PF02769 AIR synthase related protein, C-terminal domain J4T77_RS05620 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4T77_RS05635 PF17755 UvrA DNA-binding domain J4T77_RS05635 PF17760 UvrA interaction domain J4T77_RS05665 PF00581 Rhodanese-like domain J4T77_RS05665 PF17773 UPF0176 acylphosphatase like domain J4T77_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component J4T77_RS05690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS05710 PF13288 DXP reductoisomerase C-terminal domain J4T77_RS05710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4T77_RS05710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4T77_RS05720 PF00005 ABC transporter J4T77_RS05725 PF02405 Permease MlaE J4T77_RS05730 PF01783 Ribosomal L32p protein family J4T77_RS05735 PF02504 Fatty acid synthesis protein J4T77_RS05740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4T77_RS05740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4T77_RS05750 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T77_RS05760 PF12631 MnmE helical domain J4T77_RS05760 PF01926 50S ribosome-binding GTPase J4T77_RS05760 PF10396 GTP-binding protein TrmE N-terminus J4T77_RS05765 PF12838 4Fe-4S dicluster domain J4T77_RS05775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4T77_RS05775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4T77_RS05775 PF03129 Anticodon binding domain J4T77_RS05780 PF00707 Translation initiation factor IF-3, C-terminal domain J4T77_RS05780 PF05198 Translation initiation factor IF-3, N-terminal domain J4T77_RS05785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4T77_RS05785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J4T77_RS05785 PF10531 SLBB domain J4T77_RS05800 PF01348 Type II intron maturase J4T77_RS05800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS05805 PF00772 DnaB-like helicase N terminal domain J4T77_RS05805 PF03796 DnaB-like helicase C terminal domain J4T77_RS05845 PF08245 Mur ligase middle domain J4T77_RS05845 PF02875 Mur ligase family, glutamate ligase domain J4T77_RS05850 PF01053 Cys/Met metabolism PLP-dependent enzyme J4T77_RS05860 PF00012 Hsp70 protein J4T77_RS05865 PF10150 Ribonuclease E/G family J4T77_RS05865 PF00575 S1 RNA binding domain J4T77_RS05865 PF12111 Polyribonucleotide phosphorylase C terminal J4T77_RS05870 PF00471 Ribosomal protein L33 J4T77_RS05895 PF01297 Zinc-uptake complex component A periplasmic J4T77_RS05900 PF00005 ABC transporter J4T77_RS05905 PF03109 ABC1 family J4T77_RS05955 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4T77_RS05955 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4T77_RS05960 PF00312 Ribosomal protein S15 J4T77_RS05965 PF00575 S1 RNA binding domain J4T77_RS05965 PF03725 3' exoribonuclease family, domain 2 J4T77_RS05965 PF01138 3' exoribonuclease family, domain 1 J4T77_RS05965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4T77_RS05965 PF00013 KH domain J4T77_RS05985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS06005 PF04379 ApaG domain J4T77_RS06010 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4T77_RS06010 PF02222 ATP-grasp domain J4T77_RS06015 PF02542 YgbB family J4T77_RS06015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4T77_RS06020 PF01594 AI-2E family transporter J4T77_RS06035 PF00589 Phage integrase family J4T77_RS06035 PF02899 Phage integrase, N-terminal SAM-like domain J4T77_RS06045 PF01649 Ribosomal protein S20 J4T77_RS06050 PF00285 Citrate synthase, C-terminal domain J4T77_RS06080 PF01039 Carboxyl transferase domain J4T77_RS06090 PF06827 Zinc finger found in FPG and IleRS J4T77_RS06090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4T77_RS06090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4T77_RS06095 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4T77_RS06095 PF01243 Pyridoxamine 5'-phosphate oxidase J4T77_RS06115 PF01479 S4 domain J4T77_RS06115 PF00849 RNA pseudouridylate synthase J4T77_RS06120 PF01219 Prokaryotic diacylglycerol kinase J4T77_RS06140 PF00162 Phosphoglycerate kinase J4T77_RS06150 PF03060 Nitronate monooxygenase J4T77_RS06165 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J4T77_RS06205 PF03989 DNA gyrase C-terminal domain, beta-propeller J4T77_RS06205 PF00521 DNA gyrase/topoisomerase IV, subunit A J4T77_RS06210 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J4T77_RS06210 PF00355 Rieske [2Fe-2S] domain J4T77_RS06215 PF00270 DEAD/DEAH box helicase J4T77_RS06215 PF17764 3′ DNA-binding domain (3′BD) J4T77_RS06215 PF18074 Primosomal protein N C-terminal domain J4T77_RS06215 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4T77_RS06215 PF00271 Helicase conserved C-terminal domain J4T77_RS06225 PF02511 Thymidylate synthase complementing protein J4T77_RS06230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4T77_RS06245 PF00109 Beta-ketoacyl synthase, N-terminal domain J4T77_RS06245 PF02801 Beta-ketoacyl synthase, C-terminal domain J4T77_RS06250 PF00550 Phosphopantetheine attachment site J4T77_RS06255 PF00348 Polyprenyl synthetase J4T77_RS06265 PF00004 ATPase family associated with various cellular activities (AAA) J4T77_RS06265 PF07724 AAA domain (Cdc48 subfamily) J4T77_RS06265 PF10431 C-terminal, D2-small domain, of ClpB protein J4T77_RS06270 PF00227 Proteasome subunit J4T77_RS06285 PF00762 Ferrochelatase J4T77_RS06295 PF00334 Nucleoside diphosphate kinase J4T77_RS06300 PF13662 Toprim domain J4T77_RS06300 PF02132 RecR protein J4T77_RS06315 PF02817 e3 binding domain J4T77_RS06315 PF00364 Biotin-requiring enzyme J4T77_RS06315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4T77_RS06330 PF01348 Type II intron maturase J4T77_RS06330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS06340 PF02632 BioY family J4T77_RS06345 PF00881 Nitroreductase family J4T77_RS06350 PF01678 Diaminopimelate epimerase J4T77_RS06355 PF02629 CoA binding domain J4T77_RS06355 PF00549 CoA-ligase J4T77_RS06360 PF00549 CoA-ligase J4T77_RS06360 PF08442 ATP-grasp domain J4T77_RS06375 PF04452 RNA methyltransferase J4T77_RS06395 PF01218 Coproporphyrinogen III oxidase J4T77_RS06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T77_RS06400 PF00512 His Kinase A (phospho-acceptor) domain J4T77_RS06400 PF08448 PAS fold J4T77_RS06400 PF13188 PAS domain J4T77_RS06400 PF00072 Response regulator receiver domain J4T77_RS06405 PF13614 AAA domain J4T77_RS06410 PF02195 ParB-like nuclease domain J4T77_RS06410 PF17762 HTH domain found in ParB protein J4T77_RS06430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4T77_RS06435 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4T77_RS06450 PF00483 Nucleotidyl transferase J4T77_RS06450 PF01050 Mannose-6-phosphate isomerase J4T77_RS06460 PF01050 Mannose-6-phosphate isomerase J4T77_RS06460 PF00483 Nucleotidyl transferase J4T77_RS06480 PF12704 MacB-like periplasmic core domain J4T77_RS06480 PF02687 FtsX-like permease family J4T77_RS06500 PF00231 ATP synthase J4T77_RS06505 PF01523 Putative modulator of DNA gyrase J4T77_RS06510 PF00313 'Cold-shock' DNA-binding domain J4T77_RS06515 PF00271 Helicase conserved C-terminal domain J4T77_RS06515 PF00270 DEAD/DEAH box helicase J4T77_RS06520 PF00004 ATPase family associated with various cellular activities (AAA) J4T77_RS06520 PF17871 AAA lid domain J4T77_RS06520 PF02861 Clp amino terminal domain, pathogenicity island component J4T77_RS06520 PF10431 C-terminal, D2-small domain, of ClpB protein J4T77_RS06520 PF07724 AAA domain (Cdc48 subfamily) J4T77_RS06525 PF01791 DeoC/LacD family aldolase J4T77_RS06535 PF01180 Dihydroorotate dehydrogenase J4T77_RS06540 PF00035 Double-stranded RNA binding motif J4T77_RS06540 PF14622 Ribonuclease-III-like J4T77_RS06555 PF13091 PLD-like domain J4T77_RS06575 PF00210 Ferritin-like domain J4T77_RS06585 PF02254 TrkA-N domain J4T77_RS06585 PF00999 Sodium/hydrogen exchanger family J4T77_RS06595 PF02223 Thymidylate kinase J4T77_RS06605 PF01434 Peptidase family M41 J4T77_RS06605 PF06480 FtsH Extracellular J4T77_RS06605 PF17862 AAA+ lid domain J4T77_RS06605 PF00004 ATPase family associated with various cellular activities (AAA) J4T77_RS06610 PF01171 PP-loop family J4T77_RS06615 PF00691 OmpA family J4T77_RS06640 PF00719 Inorganic pyrophosphatase J4T77_RS06655 PF00639 PPIC-type PPIASE domain J4T77_RS06655 PF09312 SurA N-terminal domain J4T77_RS06660 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4T77_RS06690 PF00905 Penicillin binding protein transpeptidase domain J4T77_RS06690 PF03717 Penicillin-binding Protein dimerisation domain J4T77_RS06695 PF02401 LytB protein J4T77_RS06705 PF00183 Hsp90 protein J4T77_RS06715 PF00155 Aminotransferase class I and II J4T77_RS06725 PF09285 Elongation factor P, C-terminal J4T77_RS06725 PF08207 Elongation factor P (EF-P) KOW-like domain J4T77_RS06725 PF01132 Elongation factor P (EF-P) OB domain J4T77_RS06730 PF05239 PRC-barrel domain J4T77_RS06730 PF01782 RimM N-terminal domain J4T77_RS06735 PF00202 Aminotransferase class-III J4T77_RS06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4T77_RS06740 PF00512 His Kinase A (phospho-acceptor) domain J4T77_RS06740 PF00989 PAS fold J4T77_RS06745 PF00578 AhpC/TSA family J4T77_RS06750 PF02463 RecF/RecN/SMC N terminal domain J4T77_RS06770 PF03631 Virulence factor BrkB J4T77_RS06785 PF02142 MGS-like domain J4T77_RS06785 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4T77_RS06785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4T77_RS06805 PF00140 Sigma-70 factor, region 1.2 J4T77_RS06805 PF03979 Sigma-70 factor, region 1.1 J4T77_RS06805 PF04546 Sigma-70, non-essential region J4T77_RS06805 PF04539 Sigma-70 region 3 J4T77_RS06805 PF04545 Sigma-70, region 4 J4T77_RS06805 PF04542 Sigma-70 region 2 J4T77_RS06810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4T77_RS06820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4T77_RS06820 PF00361 Proton-conducting membrane transporter J4T77_RS06820 PF13244 Domain of unknown function (DUF4040) J4T77_RS06825 PF03334 Na+/H+ antiporter subunit J4T77_RS06835 PF01192 RNA polymerase Rpb6 J4T77_RS06845 PF00731 AIR carboxylase J4T77_RS06855 PF02779 Transketolase, pyrimidine binding domain J4T77_RS06855 PF16870 2-oxoglutarate dehydrogenase C-terminal J4T77_RS06855 PF00676 Dehydrogenase E1 component J4T77_RS06855 PF16078 2-oxoglutarate dehydrogenase N-terminus J4T77_RS06890 PF02661 Fic/DOC family J4T77_RS06890 PF13784 Fic/DOC family N-terminal J4T77_RS06895 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4T77_RS06900 PF01040 UbiA prenyltransferase family J4T77_RS06905 PF02033 Ribosome-binding factor A J4T77_RS06910 PF04760 Translation initiation factor IF-2, N-terminal region J4T77_RS06910 PF00009 Elongation factor Tu GTP binding domain J4T77_RS06910 PF11987 Translation-initiation factor 2 J4T77_RS06915 PF13184 NusA-like KH domain J4T77_RS06915 PF00575 S1 RNA binding domain J4T77_RS06915 PF08529 NusA N-terminal domain J4T77_RS06920 PF00873 AcrB/AcrD/AcrF family J4T77_RS06935 PF00120 Glutamine synthetase, catalytic domain J4T77_RS06970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS06975 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS06975 PF01348 Type II intron maturase J4T77_RS06995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS06995 PF01348 Type II intron maturase J4T77_RS07020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS07020 PF01348 Type II intron maturase J4T77_RS07095 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) J4T77_RS07100 PF01348 Type II intron maturase J4T77_RS07100 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase)