WD_RS00015	SM00382	ATPases associated with a variety of cellular activities
WD_RS00015	SM00760	Bacterial dnaA protein helix-turn-helix domain
WD_RS00050	SM00382	ATPases associated with a variety of cellular activities
WD_RS00080	SM00838	Elongation factor G C-terminus
WD_RS00080	SM00889	Elongation factor G, domain IV
WD_RS00100	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
WD_RS00105	SM00649	Ribosomal protein L11/L12
WD_RS00130	SM00663	RNA polymerase I subunit A N-terminus
WD_RS00150	SM01209	WD_RS00150
WD_RS00150	SM01210	WD_RS00150
WD_RS00165	SM00248	ankyrin repeats
WD_RS00170	SM01400	WD_RS00170
WD_RS00185	SM00849	Metallo-beta-lactamase superfamily
WD_RS00190	SM00271	DnaJ molecular chaperone homology domain
WD_RS00210	SM00507	HNH nucleases
WD_RS00265	SM00411	bacterial (prokaryotic) histone like domain
WD_RS00305	SM00411	bacterial (prokaryotic) histone like domain
WD_RS00335	SM00248	ankyrin repeats
WD_RS00400	SM00116	Domain in cystathionine beta-synthase and other proteins.
WD_RS00400	SM01240	WD_RS00400
WD_RS00405	SM00650	Ribosomal RNA adenine dimethylases
WD_RS00445	SM00936	Penicillin-binding protein 5, C-terminal domain 
WD_RS00485	SM00978	WD_RS00485
WD_RS00490	SM00479	WD_RS00490
WD_RS00500	SM00387	Histidine kinase-like ATPases
WD_RS00500	SM00433	TopoisomeraseII
WD_RS00540	SM00382	ATPases associated with a variety of cellular activities
WD_RS00540	SM00843	WD_RS00540
WD_RS00650	SM00732	Likely ribonuclease with RNase H fold.
WD_RS00655	SM00845	GatB domain
WD_RS00660	SM00248	ankyrin repeats
WD_RS00670	SM00840	WD_RS00670
WD_RS00690	SM00382	ATPases associated with a variety of cellular activities
WD_RS00700	SM00278	Helix-hairpin-helix DNA-binding motif class 1
WD_RS00700	SM00465	GIY-YIG type nucleases (URI domain)
WD_RS00720	SM01004	Delta-aminolevulinic acid dehydratase
WD_RS00730	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
WD_RS00745	SM00986	Uracil DNA glycosylase superfamily
WD_RS00745	SM00987	UreE urease accessory protein, C-terminal domain 
WD_RS00755	SM00842	Cell division protein FtsA
WD_RS00820	SM00507	HNH nucleases
WD_RS00845	SM00474	3'-5' exonuclease
WD_RS00850	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
WD_RS00850	SM00534	ATPase domain of DNA mismatch repair MUTS family
WD_RS00880	SM00028	Tetratricopeptide repeats
WD_RS00905	SM00382	ATPases associated with a variety of cellular activities
WD_RS00925	SM01007	Class II Aldolase and Adducin N-terminal domain
WD_RS00980	SM00267	diguanylate cyclase
WD_RS00980	SM00448	cheY-homologous receiver domain
WD_RS00995	SM00382	ATPases associated with a variety of cellular activities
WD_RS00995	SM01086	C-terminal, D2-small domain, of ClpB protein
WD_RS01100	SM00937	WD_RS01100
WD_RS01135	SM00530	Helix-turn-helix XRE-family like proteins 
WD_RS01140	SM00530	Helix-turn-helix XRE-family like proteins 
WD_RS01170	SM00470	ParB-like nuclease domain
WD_RS01275	SM00248	ankyrin repeats
WD_RS01280	SM00248	ankyrin repeats
WD_RS01290	SM00857	Resolvase, N terminal domain
WD_RS01300	SM00248	ankyrin repeats
WD_RS01305	SM00248	ankyrin repeats
WD_RS01365	SM00883	Chaperonin 10 Kd subunit
WD_RS01395	SM00382	ATPases associated with a variety of cellular activities
WD_RS01395	SM00464	Found in ATP-dependent protease La (LON)
WD_RS01400	SM00382	ATPases associated with a variety of cellular activities
WD_RS01400	SM00994	ClpX C4-type zinc finger
WD_RS01400	SM01086	C-terminal, D2-small domain, of ClpB protein
WD_RS01420	SM00749	bacterial OsmY and nodulation domain
WD_RS01510	SM00788	Adenylosuccinate synthetase
WD_RS01570	SM00400	zinc finger
WD_RS01570	SM00493	WD_RS01570
WD_RS01660	SM00382	ATPases associated with a variety of cellular activities
WD_RS01675	SM00937	WD_RS01675
WD_RS01680	SM00116	Domain in cystathionine beta-synthase and other proteins.
WD_RS01680	SM00924	MgtE intracellular N domain
WD_RS01730	SM00248	ankyrin repeats
WD_RS01735	SM00861	Transketolase, pyrimidine binding domain
WD_RS01740	SM00363	S4 RNA-binding domain
WD_RS01740	SM01390	WD_RS01740
WD_RS01765	SM00729	Elongator protein 3, MiaB family, Radical SAM
WD_RS01795	SM00382	ATPases associated with a variety of cellular activities
WD_RS01805	SM00836	DALR anticodon binding domain
WD_RS01805	SM01016	Arginyl tRNA synthetase N terminal dom
WD_RS01825	SM00382	ATPases associated with a variety of cellular activities
WD_RS01845	SM00363	S4 RNA-binding domain
WD_RS01860	SM00729	Elongator protein 3, MiaB family, Radical SAM
WD_RS01880	SM00873	B3/4 domain
WD_RS01880	SM00874	tRNA synthetase B5 domain
WD_RS01880	SM00896	Ferredoxin-fold anticodon binding domain
WD_RS01920	SM00878	Biotin carboxylase C-terminal domain
WD_RS01940	SM00248	ankyrin repeats
WD_RS01945	SM00072	Guanylate kinase homologues.
WD_RS01955	SM00248	ankyrin repeats
WD_RS01990	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
WD_RS02005	SM00062	Bacterial periplasmic substrate-binding proteins
WD_RS02015	SM00382	ATPases associated with a variety of cellular activities
WD_RS02045	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
WD_RS02060	SM00382	ATPases associated with a variety of cellular activities
WD_RS02105	SM00382	ATPases associated with a variety of cellular activities
WD_RS02110	SM00861	Transketolase, pyrimidine binding domain
WD_RS02130	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
WD_RS02140	SM00244	prohibitin homologues
WD_RS02170	SM00919	Malic enzyme, NAD binding domain
WD_RS02170	SM01274	WD_RS02170
WD_RS02200	SM01192	WD_RS02200
WD_RS02200	SM01193	WD_RS02200
WD_RS02230	SM00729	Elongator protein 3, MiaB family, Radical SAM
WD_RS02250	SM00530	Helix-turn-helix XRE-family like proteins 
WD_RS02255	SM00853	MutL C terminal dimerisation domain
WD_RS02255	SM01340	WD_RS02255
WD_RS02380	SM01323	WD_RS02380
WD_RS02425	SM00028	Tetratricopeptide repeats
WD_RS02445	SM00957	SecA DEAD-like domain
WD_RS02445	SM00958	SecA preprotein cross-linking domain
WD_RS02490	SM00116	Domain in cystathionine beta-synthase and other proteins.
WD_RS02490	SM01091	Transporter associated domain
WD_RS02530	SM00248	ankyrin repeats
WD_RS02665	SM00470	ParB-like nuclease domain
WD_RS02675	SM00248	ankyrin repeats
WD_RS02735	SM00487	DEAD-like helicases superfamily
WD_RS02735	SM00490	helicase superfamily c-terminal domain
WD_RS02765	SM00382	ATPases associated with a variety of cellular activities
WD_RS02785	SM00984	UDP binding domain
WD_RS02795	SM00530	Helix-turn-helix XRE-family like proteins 
WD_RS02800	SM00530	Helix-turn-helix XRE-family like proteins 
WD_RS02815	SM00530	Helix-turn-helix XRE-family like proteins 
WD_RS02845	SM00248	ankyrin repeats
WD_RS02850	SM00857	Resolvase, N terminal domain
WD_RS02860	SM00248	ankyrin repeats
WD_RS02865	SM00248	ankyrin repeats
WD_RS02930	SM00822	WD_RS02930
WD_RS02940	SM00028	Tetratricopeptide repeats
WD_RS02975	SM00662	RNA polymerases D
WD_RS03035	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
WD_RS03040	SM01374	WD_RS03040
WD_RS03060	SM00322	K homology RNA-binding domain
WD_RS03075	SM01382	WD_RS03075
WD_RS03075	SM01383	WD_RS03075
WD_RS03095	SM01403	WD_RS03095
WD_RS03115	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
WD_RS03200	SM00382	ATPases associated with a variety of cellular activities
WD_RS03210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
WD_RS03270	SM00382	ATPases associated with a variety of cellular activities
WD_RS03280	SM00864	Tubulin/FtsZ family, GTPase domain
WD_RS03280	SM00865	Tubulin/FtsZ family, C-terminal domain
WD_RS03320	SM00448	cheY-homologous receiver domain
WD_RS03320	SM00862	Transcriptional regulatory protein, C terminal
WD_RS03400	SM00564	beta-propeller repeat
WD_RS03440	SM00904	Riboflavin kinase
WD_RS03475	SM00248	ankyrin repeats
WD_RS03490	SM00382	ATPases associated with a variety of cellular activities
WD_RS03520	SM01130	WD_RS03520
WD_RS03525	SM00292	breast cancer carboxy-terminal domain
WD_RS03525	SM00532	Ligase N family
WD_RS03535	SM00481	DNA polymerase alpha chain like domain
WD_RS03555	SM00998	Adenylosuccinate lyase C-terminus
WD_RS03575	SM00478	endonuclease III
WD_RS03575	SM00525	WD_RS03575
WD_RS03585	SM01329	WD_RS03585
WD_RS03600	SM00357	Cold shock protein domain
WD_RS03600	SM00382	ATPases associated with a variety of cellular activities
WD_RS03600	SM00959	Rho termination factor, N-terminal domain
WD_RS03715	SM00487	DEAD-like helicases superfamily
WD_RS03715	SM00490	helicase superfamily c-terminal domain
WD_RS03745	SM00244	prohibitin homologues
WD_RS03750	SM00244	prohibitin homologues
WD_RS03755	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WD_RS03780	SM00487	DEAD-like helicases superfamily
WD_RS03780	SM00490	helicase superfamily c-terminal domain
WD_RS03860	SM00382	ATPases associated with a variety of cellular activities
WD_RS03875	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WD_RS03900	SM00798	AICARFT/IMPCHase bienzyme
WD_RS03900	SM00851	MGS-like domain
WD_RS03915	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
WD_RS03960	SM00474	3'-5' exonuclease
WD_RS03975	SM01236	WD_RS03975
WD_RS04000	SM00382	ATPases associated with a variety of cellular activities
WD_RS04005	SM00382	ATPases associated with a variety of cellular activities
WD_RS04005	SM00962	SRP54-type protein, GTPase domain
WD_RS04005	SM00963	SRP54-type protein, helical bundle domain
WD_RS04080	SM01387	WD_RS04080
WD_RS04085	SM00316	Ribosomal protein S1-like RNA-binding domain
WD_RS04085	SM00322	K homology RNA-binding domain
WD_RS04160	SM00248	ankyrin repeats
WD_RS04185	SM00316	Ribosomal protein S1-like RNA-binding domain
WD_RS04230	SM00382	ATPases associated with a variety of cellular activities
WD_RS04280	SM00829	Enoylreductase
WD_RS04295	SM00967	RNA 2'-O ribose methyltransferase substrate binding
WD_RS04305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
WD_RS04415	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
WD_RS04425	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
WD_RS04475	SM00382	ATPases associated with a variety of cellular activities
WD_RS04540	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
WD_RS04540	SM00475	5'-3' exonuclease
WD_RS04540	SM00482	DNA polymerase A domain
WD_RS04575	SM01228	WD_RS04575
WD_RS04620	SM01211	WD_RS04620
WD_RS04665	SM01091	Transporter associated domain
WD_RS04730	SM01207	WD_RS04730
WD_RS04755	SM00382	ATPases associated with a variety of cellular activities
WD_RS04805	SM00382	ATPases associated with a variety of cellular activities
WD_RS04830	SM00480	DNA polymerase III beta subunit
WD_RS04855	SM00271	DnaJ molecular chaperone homology domain
WD_RS04860	SM00644	WD_RS04860
WD_RS04865	SM00271	DnaJ molecular chaperone homology domain
WD_RS04870	SM00932	Scaffold protein Nfu/NifU N terminal
WD_RS04885	SM00382	ATPases associated with a variety of cellular activities
WD_RS04885	SM00962	SRP54-type protein, GTPase domain
WD_RS04885	SM00963	SRP54-type protein, helical bundle domain
WD_RS04905	SM00935	Outer membrane protein (OmpH-like)
WD_RS04915	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
WD_RS04930	SM00411	bacterial (prokaryotic) histone like domain
WD_RS04935	SM00316	Ribosomal protein S1-like RNA-binding domain
WD_RS05035	SM00382	ATPases associated with a variety of cellular activities
WD_RS05145	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
WD_RS05145	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
WD_RS05145	SM00493	WD_RS05145
WD_RS05150	SM00450	Rhodanese Homology Domain
WD_RS05205	SM00563	Phosphate acyltransferases
WD_RS05245	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
WD_RS05245	SM01232	WD_RS05245
WD_RS05270	SM00363	S4 RNA-binding domain
WD_RS05355	SM00493	WD_RS05355
WD_RS05360	SM00562	WD_RS05360
WD_RS05390	SM00382	ATPases associated with a variety of cellular activities
WD_RS05390	SM01086	C-terminal, D2-small domain, of ClpB protein
WD_RS05410	SM00825	Beta-ketoacyl synthase
WD_RS05435	SM00487	DEAD-like helicases superfamily
WD_RS05435	SM00490	helicase superfamily c-terminal domain
WD_RS05445	SM00434	DNA Topoisomerase IV
WD_RS05455	SM00028	Tetratricopeptide repeats
WD_RS05480	SM00881	CoA binding domain
WD_RS05530	SM00470	ParB-like nuclease domain
WD_RS05605	SM00357	Cold shock protein domain
WD_RS05610	SM00487	DEAD-like helicases superfamily
WD_RS05610	SM00490	helicase superfamily c-terminal domain
WD_RS05615	SM00382	ATPases associated with a variety of cellular activities
WD_RS05615	SM01086	C-terminal, D2-small domain, of ClpB protein
WD_RS05620	SM01133	WD_RS05620
WD_RS05635	SM00358	Double-stranded RNA binding motif
WD_RS05635	SM00535	Ribonuclease III family
WD_RS05695	SM00382	ATPases associated with a variety of cellular activities
WD_RS05800	SM00841	Elongation factor P, C-terminal
WD_RS05800	SM01185	WD_RS05800
WD_RS05815	SM00387	Histidine kinase-like ATPases
WD_RS05815	SM00388	His Kinase A (phosphoacceptor) domain
WD_RS05860	SM00851	MGS-like domain
WD_RS05860	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
WD_RS05905	SM01409	WD_RS05905
WD_RS05915	SM01001	AIR carboxylase
WD_RS05920	SM00853	MutL C terminal dimerisation domain
WD_RS05920	SM01340	WD_RS05920
WD_RS05925	SM00861	Transketolase, pyrimidine binding domain
WD_RS05970	SM00316	Ribosomal protein S1-like RNA-binding domain
WD_RS05970	SM00322	K homology RNA-binding domain
WD_RS05985	SM01230	WD_RS05985
WD_RS06035	SM00248	ankyrin repeats
WD_RS06080	SM00248	ankyrin repeats
