ONI09_RS00015 NONE
ONI09_RS00020    4106 ..    4119 +  -3.9  -2.61004   AATTTGCTATGTTTA               TTAAC ATAA GTTAA                GATTTTTAGGAATAC  45 65
ONI09_RS00025 NONE
       virB9 NONE
ONI09_RS00035 NONE
      virB11 NONE
ONI09_RS00045 NONE
ONI09_RS00050   11447 ..   11462 +  -3.2  -4.66833   CAATTCCACCATCAA              GAGCAA TTCT TGGCTC               TTTTTGCACTTCGGC  64 391
        rpsL NONE
        rpsG NONE
        fusA NONE
         tuf   17336 ..   17359 +  -5.4  -3.14564   TTTTGGAGTGAGAGT          TTGAGTTATA GGAG TGTAGCTCAA           TTGGTAGAGCGCTGG  54 30
ONI09_RS00085 NONE
        secE NONE
        nusG NONE
ONI09_RS00100 NONE
        rplA NONE
        rplJ NONE
        rplL   20516 ..   20530 +  -2.2  -3.28784   CAACTAAAGTGGAGC               TTGAAT AAT ATTTAA               TGTATTAATTTTATA  44 18
ONI09_RS00120   29412 ..   29422 +  -5.4  -3.91488   CCTATCATCACTCCG                 TCTG CTC CAGA                 TTCTTTGAGAGCATT  63 342
        serS NONE
        purD   34118 ..   34130 +  -7.7  -3.53012   ATATAAGCCGAAACG                CGCTT ACA AAGCG                TTTAAGACAGCAAAA  71 250
ONI09_RS00150   38132 ..   38149 +  -2.7  -3.07344   TAAGTTGCAGAGGCT             CTACAAT GGGA AGTGTAG              TATGTTAGCAGATAC  43 71
ONI09_RS00155 NONE
        gatC   39871 ..   39886 +  -3.2  -4.09628   ATTCAATTTTATGCC              CCTCTG AAAG CAGACG               TTCTTCTTTGCCATC  57 237
ONI09_RS00205 NONE
ONI09_RS00210   52962 ..   52990 +   -11   -3.9461   GTATGACGGTTCGTG        GCGGCGTGACGA TAAGC TCGTCATCCCGC        TTCTTGTTAGCGGGA  93 221
ONI09_RS00215   55019 ..   55031 +  -2.7  -3.55824   ATTGCTATATTATAT                TTACG TAT TGTAA                TATTTATCAATAATG  48 61
ONI09_RS00220 NONE
ONI09_RS00225   55685 ..   55713 +  -4.8  -2.77962   GCGTGAAACACTACG       TCTCGCTAAAATT TTGG AATTTT-GTGAGA        GTTTAAAATGTGGCA  51 35
ONI09_RS00230   56326 ..   56340 +  -2.2  -4.14472   TAATTGAATTTGGAT               TTATAT GAA ATATGA               TTTTAAAAGTGTTGA  54 34
        leuS   58910 ..   58936 +  -2.4  -2.87253   TTTTTGACATGTAGT         TATATCTTTTTT AAT ATAAAGGATGTA         TACTTATGCATTATA  41 89
ONI09_RS00240   59770 ..   59784 +    -5  -4.07885   GTAATTGCTGTTGAA               TGATGG AGT CCATTA               TTTTAGCACGAAGTA  62 185
ONI09_RS00270   62940 ..   62962 +  -3.5  -3.83214   TGCTGCTTTTTCCTT           CTCATTTAA AATAC TTAAAAGAG           TTTGGCTTGCTTTAA  52 42
ONI09_RS00290 NONE
ONI09_RS00295 NONE
ONI09_RS00300   67285 ..   67297 +  -7.7  -3.55444   AAAGCAGCTGAATTT                CGCTT GTC AAGCG                TTTAAAACATAAAAA  71 409
ONI09_RS00305   68986 ..   69002 +  -2.3  -3.24411   AGGTTAACTGAGCGA              TTAGTAA AGA TTGCTGA              TATGTTTGACAAAAT  44 442
ONI09_RS00330 NONE
ONI09_RS00335 NONE
ONI09_RS00340   74543 ..   74553 +    -4  -3.91072   GGTGTCTTGCTGCTT                 GAAA TGT TTTC                 TTTGTAAAAATTTGG  57 106
ONI09_RS00355   78052 ..   78070 +  -3.1  -4.66953   AAGTTAAGCAAGTAT             TCTAAGG AGAAC CCTTCGA             TTTTTGACCTATTGA  64 158
ONI09_RS00370   80415 ..   80435 +  -5.4  -3.01979   TTAGAAACCTAAATT            GGGCTTGT AATTA ATGAGCCC            TATACTTATATATTC  54 41
        dnaK NONE
ONI09_RS00380 NONE
        metC NONE
ONI09_RS00390   85580 ..   85608 +  -9.6  -4.20516   TGAAGCAAAAGTGAT        GTCATGCCAGTG CGTGA CACTGGGATGGC        TTTGTTGCATCACAC  93 79
ONI09_RS00410   88380 ..   88390 +  -3.2  -3.68674   TGTCTTTTGTTTAGA                 GACT GTT GGTC                 TATTTTAGAGGTTTT  52 330
ONI09_RS00420   89909 ..   89922 +  -2.5  -4.08221   AATAGTAATTTGTTA               TTTAT ATTA ATAAA                TTTAATTCTATTGAA  53 207
ONI09_RS00425 NONE
ONI09_RS00430   90909 ..   90919 +    -4  -5.02287   AAATATTTACCCCTA                 TCAA CTT TTGA                 TTTTGTGTTTTTGTC  72 300
        rlmB   91953 ..   91965 +  -4.8  -3.96148   TATTAAAACAAATGC                CAGC GCATA GCTG                TTTATAATAAAAACA  62 16
ONI09_RS00445 NONE
ONI09_RS00450   93447 ..   93457 +    -4  -3.26531   GTTAGATAACATAAT                 CAAA GTT TTTG                 TCTTAATATTCATCA  49 171
ONI09_RS00455   94576 ..   94596 +  -5.4  -2.87344   TACCGACAACCTTCA            TCCCGCTA CGTGT TAGCGGAA            TCTATACCGCGAATA  52 152
ONI09_RS00460   95140 ..   95153 +  -5.3  -2.72344   GAGAACAAAAGCTCA               CAAGA GGGT TCTTG                TCATTCAAGATACCA  51 289
ONI09_RS00490 NONE
ONI09_RS00495   99832 ..   99862 +  -9.9  -3.02096   TTAACAATTATCATA       CATACATTGTTGC ATATA GCAATAGTGTATG       TGTATAGTTAGTAGG  77 37
ONI09_RS00500  101537 ..  101553 +  -9.5  -2.62616   TCGAACTTGGGACCT              CGTCATT ACC AATGACG              TACTCTACCACCTGA  72 108
        mutM NONE
        pdxH NONE
ONI09_RS00525  105554 ..  105566 +  -2.7  -4.25676   GCACATGTTGAAAAA                TTAAG AAA CTTGA                TTTTAAGGTTTGGTT  55 22
ONI09_RS00530 NONE
ONI09_RS00535 NONE
ONI09_RS00540  108647 ..  108663 +  -3.7   -5.0809   TAACTCATTTGGATT              TGCTACA CCC TATAGCA              TTTTTATCATTTGTT  73 434
ONI09_RS00575  112392 ..  112402 +  -2.6  -3.09505   TTTTTAAACGTATGA                 TATA GGT TATA                 TGTTAAGTAGCCTCT  43 21
ONI09_RS00580  113546 ..  113564 +  -3.1  -2.72144   TTTATTATGTATGGA             GGAATGT TATGC ACAGTCC             CTTTAAAAAACCTAA  43 141
ONI09_RS00585 NONE
ONI09_RS00590  115253 ..  115279 +  -2.5   -5.3671   GATAGCGAAAAAAAA         GATAAAAAT TAAGATAGT ATTTTTATC         TTTTTTAATTATCTT  72 14
ONI09_RS00595  117932 ..  117951 +  -4.2   -4.4009   ACGCAAGGTACAGGA            GCTGGAGT TTCT GCTGCAGC             TTTTATCGACTGGGA  64 294
ONI09_RS00605  121481 ..  121491 +  -2.4   -4.2123   AGTACTGAACCAAGA                 TCCC AGT GGGC                 TTTGTTGCATCGCTC  56 457
ONI09_RS00615 NONE
ONI09_RS00620 NONE
ONI09_RS00625  124973 ..  125004 +  -9.6   -3.6581   GCGTTAATCAAATGT      TACCCTATCTTTGT ATAT GTAAAGGTAGGGTA       TCTTTTCAAAATAGT  82 34
ONI09_RS00640  127189 ..  127205 +  -3.6   -3.0094   CAGTCCTACGTCATA              CCGCGA TTCAT TCTCGG              TATCTCTAGATCCCG  47 0
ONI09_RS00645  127653 ..  127667 +  -2.8  -5.27399   GTCTTTTACTATCTC               TGTCGA GTA TTGGCA               TTTTTTGATGTCTTG  72 332
ONI09_RS00655 NONE
        hemH  130226 ..  130242 +  -2.2  -5.10163   TAAATCTCCCTTAAA              GTCCTG ATTCA TAGGGC              TTTTCTTTTAGGATT  67 27
ONI09_RS00665  131320 ..  131337 +  -7.7  -4.19817   CTATATAGTATATTA             GCGGTTC TGCA GAACTGC              TTTTAAATACGTCAA  78 235
        hslV NONE
        hslU  134890 ..  134901 +  -4.4  -4.46514   TTATTTACTGAGTCG                GGAT ATTT ATCC                 TTTATTTCGATCAGT  66 479
        acpP  136849 ..  136859 +    -4  -3.08679   TAATAATAAAAAAGG                 CTAA TAG TTAG                 TGTTAAATGAGCAGA  47 22
        fabF  138182 ..  138222 +  -5.4  -3.28924   CATGCAAGCAGCTCT  CCTACTGTCATCCCAG CACGTGACA CTGGGATGACAAACGG  TTGTGAAAGGGAATA  55 70
ONI09_RS00705  139265 ..  139275 +  -5.4  -3.08522   GATGAGGAAGAAAAA                 GCAA ATT TTGC                 CTTTTACGGTCAATA  54 99
        murA NONE
        thyX  141537 ..  141551 +  -2.8  -3.39483   GTTAACTCTCGTTCA               CCAGAT TGA ATCTTG               CTTTTTACATCACAT  47 74
        priA  146008 ..  146030 +  -4.8   -3.0263   GTAGCGTGGTCAACC           GGTACACACC CAA GATGTGTACA           TATTCCAAGCATAAT  52 201
ONI09_RS00745  150693 ..  150713 + -11.2  -2.91383   AGCAGTCCTACGTCA            TACCGCGA TTCAT TCGCGGTA            TCTCTAGATCCCGCT  83 135
        nuoI NONE
ONI09_RS00770  154794 ..  154805 +  -2.2  -3.14002   TGCACGAACATTTGT                TTGC GAGG GCAG                 TATGTTAAATGTTAT  42 6
ONI09_RS00775 NONE
        thrS NONE
        infC  157916 ..  157930 +  -2.8  -3.99461   TTATCCCAACCTCCT               CGCA CTCCACC TGCG               TATTTTTCAATTAAT  52 490
ONI09_RS00800  159321 ..  159333 +  -2.7  -3.91357   TAACTTTTCTCTACG                CAAGT AAT ATTTG                TTATTATAATTCTGA  53 125
ONI09_RS00805  161019 ..  161042 +  -5.4  -3.87994   GACATTAATAATGAC          TCACTGTTAT TTGT ATAGTAGTGA           TTTATAAAGATAAGT  61 8
ONI09_RS00810  161534 ..  161561 +   -15  -2.75521   TGCTTTAATAAAAAA        GGTAATAGCCTG ATAT CAGGCTGTTACC         CTTTCCACATATCAT  95 33
ONI09_RS00815  161969 ..  161991 + -12.8  -3.01912   CATATAAGAAAAAAA           GTAATAGCCC AGT GGGCTGTTAC           TCTCTCTACATATCG  87 34
ONI09_RS00855  171922 ..  171937 +    -4  -3.57462   TCTGCTTGCTGAATA              GG-GGAT TTC ATCCACC              TTTCAACATACAGTA  52 482
ONI09_RS00875  174664 ..  174675 +    -3  -3.74158   GTGCTTATCCACATA                TTTC TCAA GAAA                 TCTTTTAGTAGCATT  50 466
ONI09_RS00890  177223 ..  177251 +  -9.6  -4.20516   TAGGAAGAAAAGGGT        GTCATGCCAGTG CGTGA CACTGGGATGGC        TTTGTTGCATCACAC  93 101
ONI09_RS00915 NONE
ONI09_RS00920  183219 ..  183235 +  -5.8  -2.88663   AGCTAACACGTCATA              CCGCGA TTCAT TTGCGG              TATCTCGGCATAGAT  56 143
ONI09_RS00925 NONE
         dxr  185270 ..  185287 +  -2.1  -3.35467   AAAAATATAGTTGAA             TAATTGT GTGT ATAATTA              TTAATGCTTTCTAAG  45 140
ONI09_RS00935  186323 ..  186335 +  -3.3  -3.07132   CCTTCTTGTACCATC                TCCCA AAG TGGGC                TCATTTCTCTCAGTC  45 112
ONI09_RS00955  189406 ..  189420 +  -5.8  -3.12884   TATTGAATTAATTAA               TGTTAT AAT ATAACA               TATTAGGTAATATTT  57 61
ONI09_RS00960  189936 ..  189949 +  -3.9  -3.80625   GCAAGAGTACAAGCT               TAAGT ATTA ACTTA                TTTAACTTATACAGG  55 23
ONI09_RS00965 NONE
ONI09_RS00970  191865 ..  191877 +  -6.3  -4.15044   TTTTCACTCTTTTCT                TTTCC TTG GGAAA                TTTGTTCAGAAACAG  67 212
        murJ NONE
ONI09_RS01045  207787 ..  207799 +  -2.7  -4.23281   CACAACTTTTGTCTT                TTTTC CAT GAGAA                TTTCTATTGCATCTT  57 189
        lipB NONE
ONI09_RS01070  211609 ..  211629 + -11.2  -2.91383   CACCACGAACCGTCA            TACCGCGA TTCAT TCGCGGTA            TCTCTAGATCCCGCT  83 161
ONI09_RS01100 NONE
ONI09_RS01110 NONE
ONI09_RS01115  219655 ..  219665 +    -4   -4.0156   TGAGTTGCATATTTG                 GTTA TTA TAAC                 TTCTTCTTCGTGTCA  57 38
        hemE NONE
ONI09_RS01130  223614 ..  223632 +  -3.2  -3.85114   CAAGCTTTATTATCT             CTTCTA TACCACT TAGAAG             TTTCCTATACAATTT  55 430
ONI09_RS01140  225518 ..  225534 +  -3.1  -3.48172   ATTTAAGGTTCTTGT              TATTATG AAA TATAATA              CTTTATTTTACTTTG  48 103
ONI09_RS01150  226321 ..  226340 +  -2.9  -4.69664   ACCTCTCGCAATAAA            TCACAAT AATAGG GTTGTGA             TTTTTAGCTACTATA  63 213
ONI09_RS01165  230014 ..  230026 +  -7.7  -3.55071   ATATAAGCTGAAGCG                CGCTT ATA AAGCG                TTTAAGACAGTATAG  71 249
ONI09_RS01195  236477 ..  236491 +  -4.2  -3.03903   ACGTGCAAGCGGTCG               CTGGTT CGA ACCCAG               TGTTACCCACGTTTT  50 0
ONI09_RS01200 NONE
ONI09_RS01205 NONE
ONI09_RS01240  247353 ..  247363 +  -5.4  -3.31869   TATATGGTTTTAAGT                 GTTC TAA GAAC                 TCTTCTACATTTCTG  57 232
        ssrS NONE
ONI09_RS01260  249793 ..  249803 +    -4  -3.25567   TAGTAAGTTAAGTGT                 TTAC ATT GTAA                 TGATTTTTAGACTAT  49 70
ONI09_RS01265  250887 ..  250918 +    -6  -3.14468   ACAATCCCTTTAATT      CTAGCATAATAATC GACT GTTTATTATACTAG       TTAACTATAGTACGA  57 405
ONI09_RS01275  251835 ..  251851 +  -3.7  -2.76263   TTTTAAAATTTTACT              TTTTTCC CAT GGAAAAC              TACTTACATAATCCA  46 147
         ffs  252899 ..  252913 +  -2.1   -4.2181   ATATCAGAACCTTTT               TGGGT TGCAT ACCTA               TTTCATTATTTGTTT  54 6
        dnaX NONE
ONI09_RS01300  255042 ..  255052 +  -2.4  -4.20516   AATAAAATTCCTGGA                 TCCC AGT GGGC                 TTTGTTGCATCACAC  54 307
        rpsP NONE
ONI09_RS01320 NONE
ONI09_RS01325 NONE
        trpS  259416 ..  259465 +  -4.3   -4.6902   GTGTGATGGTGCGAA CCGTCATACCGCCGCG-G-TATC TCAGCC GCTAACACGTAGCGGGATGACGG TTTTTCAAATTGTCG  70 50
ONI09_RS01350  263117 ..  263138 +  -5.1  -3.81322   TGACAAAGGAGAGCA           GTGTCAGCT ACTT GGATGACAC            CTTTTTTCTACTTAG  59 243
ONI09_RS01355  264537 ..  264570 + -17.1  -3.23734   AAGTTTGCCTACAAG     TCTGATTGTATTAAG ATTA CTTAATACAATCAGA      TCTATTATATGCGTT 100 39
ONI09_RS01360 NONE
ONI09_RS01365 NONE
ONI09_RS01370 NONE
ONI09_RS01375  268417 ..  268435 +  -3.9  -4.72986   TAAGTACCTCGCTGT            GGAAG-TG TATT CATCTTCC             TTTTTACTGAAACTA  69 410
        miaA  272929 ..  272957 +  -5.4   -5.5074   TTTACATAATTCTTC       TTCCAGTTCTGCA AAAG TGC-GAACTGCAA        TTTTTTCTTCAATTC  84 335
        recG  276154 ..  276166 +  -7.7  -3.55444   AAAGCGGCTGAATCT                CGCTT GTC AAGCG                TTTAAAACATAAAAA  71 409
ONI09_RS01430  277141 ..  277155 +  -5.7  -3.65201   TTTCGCTTTGCATCT               TGAGC TTGAC GCTCA               TTGTTACCACTGTTA  60 156
ONI09_RS01455  280699 ..  280714 +  -2.6  -2.75818   AATTTATGTTTGCAT              TTTCTT ATTA AAGAAG               TAATATTAGCGTATT  41 58
        hflK NONE
ONI09_RS01465 NONE
ONI09_RS01470 NONE
        terL  285955 ..  285965 +  -3.2  -5.34365   TGATGAACTATCGCT                 TTCG CTT CGAG                 TTTTTCTTGTTGTAC  76 173
ONI09_RS01495  291854 ..  291874 + -11.2  -3.14528   GCCAATGACTTGTCA            TTCCAGCG CGTGA CGCTGGAA            TCTTGAAATTTGTGT  84 206
ONI09_RS01500 NONE
ONI09_RS01505  294824 ..  294836 +  -3.3  -3.87956   CTCTGCTATTGCCCT                CTCCT GTA AGGTG                TTTGATATAGGTTTT  55 349
ONI09_RS01525  298974 ..  298984 +  -5.4  -3.36655   GAATTTTTTAACTCT                 GAGA TTA TCTC                 TTCATCTGTGTATCC  57 512
ONI09_RS01550 NONE
ONI09_RS01555 NONE
ONI09_RS01560  304354 ..  304365 +  -4.4  -3.53012   ATAATCTGAATCCAC                CATG AATG CATG                 TTTAGCGCCGCGAGA  55 316
ONI09_RS01605  321816 ..  321828 +  -7.7  -3.55444   AAAGCGGCTGAATCT                CGCTT GTC AAGCG                TTTAAAACATAAAAA  71 419
ONI09_RS01625  325731 ..  325754 +  -2.6   -4.0044   TTTAATGTACAATTT          TAATTTGATT CTTT AATAAAATTA           TTTATACTAATGCTT  53 36
        rpmI  326009 ..  326020 +  -2.2  -3.54424   TAGTTAAGCTTCATA                TGCC TTAC GGTA                 TTTAACAAAATGGAG  47 9
        rplT NONE
         fmt  327477 ..  327487 +  -6.8  -4.27117   TGGTGTCATTCCAGT                 CTGG AAT CCAG                 TTTCTATTGTACAGC  73 179
        purH  329241 ..  329261 + -11.2  -2.88663   CGCCACAAACCGTCA            TACCGCGA TTCAT TCGCGGTA            TCTCTCAACATAGAT  83 63
ONI09_RS01655  330116 ..  330132 +  -2.9  -3.41195   GGTTCGAATCCGGCC              CGGGGAG CTC TTCTCTG              TTGAATTTTAGTGTT  47 16
        gpmI  331699 ..  331711 +  -3.4  -3.75051   TATGCACCGGAATGA                CATC AAATA GATG                TGTTTTAACTTAATC  52 48
        rpmE  333037 ..  333055 +  -6.8  -3.73224   TTTCTAATTTTCCTC             CTCTTTAA GTT TTAGAGAG             TTTACTGAAGCATGC  66 34
ONI09_RS01675  334022 ..  334035 +  -3.8   -4.3078   CCAGTGTCTGTGCAC               TGGG ATGACA CCCA                TTTGTTCCTATAGTT  62 186
ONI09_RS01685 NONE
ONI09_RS01690  335694 ..  335714 + -11.2  -2.91383   CGCCGCAGACCGTCA            TACCGCGA TTCAT TCGCGGTA            TCTCTAGATCCCGCT  83 80
ONI09_RS01725  338270 ..  338282 +  -3.4   -3.7104   AAGGCAAAAGAAACC                CTAG GGTAG CTAG                TTATTCACTATCCAT  50 75
ONI09_RS01735  339431 ..  339452 +  -2.3  -3.66646   CCAGATGTAATAGAA           GTTTTTTGT TTAT GCAAAACAC            TTTAGATACCGTCTT  47 31
ONI09_RS01740  340052 ..  340071 +  -2.9  -4.69664   ACCTCTCGCAATAAA            TCACAAT AATAGG GTTGTGA             TTTTTAGCTACTATA  63 213
        trxA  341546 ..  341556 +  -2.6  -3.14463   ATTTGCTTTTGTGTG                 TATT ATA AATA                 TTGATAAAAGGGATT  43 48
ONI09_RS01755 NONE
ONI09_RS01760  342413 ..  342425 +  -3.4  -2.98494   TCAGTGATGTTGGAA                TGCA ATGTC TGCA                TGTAATCTTCTTATA  45 61
ONI09_RS01765 NONE
        folP NONE
ONI09_RS01775 NONE
ONI09_RS01780  345323 ..  345333 +  -3.2  -3.28712   AAATTTGCTATTAGA                 CTTC TTA GAGG                 TTGTCCACAAACCAA  47 101
        radA  348703 ..  348715 +  -4.8  -2.94912   GGTTCACATTATTTT                GCAG CCTTC CTGC                TGTGTCAATTAGAAC  52 341
        iscU NONE
ONI09_RS01805 NONE
ONI09_RS01810 NONE
        hscA  352677 ..  352689 +  -2.7  -3.64487   ATAATAAACCGGAGT                GTTAT ATG ATAGC                TTATTAGAAATGTCA  48 264
ONI09_RS01860 NONE
ONI09_RS01865 NONE
ONI09_RS01870 NONE
ONI09_RS01910 NONE
ONI09_RS01915  369368 ..  369379 +    -3  -4.99035   CTTTACAAAACTTCA                TCTA CATC TAGA                 TTTTTATCTAAATAA  68 426
        terL  371455 ..  371465 +  -3.2  -2.72364   TGCAAGTAGCTGACA                 CTGG AAT CTAG                 CTTCTCGTTGCTGCT  43 96
        topA  374105 ..  374116 +  -4.4   -3.0701   GTTGATTAAGGGTAA                GAAG TAGA CTTC                 TTGCATAACCATTAT  50 19
ONI09_RS01935  374717 ..  374731 +  -4.2  -3.12895   CCTAATTTCACTTCA               TACTCG TTT CGTGTA               TCTATTACTAAAACG  51 440
ONI09_RS01950  377603 ..  377616 +  -5.3  -3.61894   TAAACTTAACAATAG               TGTTG ACAT CAACA                TTATTAGCCAGCATT  58 98
ONI09_RS01965  380277 ..  380297 +    -9  -3.04853   CCTCTTTTCCCGTCA            TCCCGCTG CTTGT TAGCGGGA            TCTCATTTCACTTTG  71 125
ONI09_RS01975 NONE
ONI09_RS01980  384451 ..  384464 +  -3.1  -5.33866   ATTTATAGTAGAGCT               CACTT TATA AGGTG                TTTTTTATAGATTTA  74 186
ONI09_RS01985  385633 ..  385650 +  -2.8  -5.05505   TATTACTCAGATGAT             CAATAA TTAAAT TTATTG              TTTTTAATTTGTAAT  69 16
ONI09_RS01990 NONE
        rpsT  386741 ..  386773 +    -8  -2.96395   AGCATTGATGACCGC      TTAATACGGTTAAT GTAAA GTTAACTGTATTAA      TATATACTCCTCAGT  68 22
ONI09_RS02000  388315 ..  388333 +    -3  -4.35524   GCTTATCTACTTTAT             TGCGGCTG TCC CGGTCGGA             TTTTAACTTTAGCGC  60 265
        ruvA  390977 ..  390987 +  -3.2  -3.11291   CATTATTCGCATGGC                 GCTT AAG GAGC                 TCTTAACATTATGAA  45 1
        ruvB NONE
ONI09_RS02030  392608 ..  392622 +  -4.3  -3.60627   TGAAGTGGCTAATGG               GTCAT ATCAA ATGAC               TTTAAAGTGGAATGC  55 62
ONI09_RS02035  392943 ..  392976 + -16.3  -3.27475   AGTAGTGAAAATTCA     GTATAAGTTGCTTGC ATCT GCAAGTAACTTATAC      TCTTATAATGAGCAA 100 45
ONI09_RS02040  393667 ..  393689 +  -6.4  -3.63805   TTAATTTCCTCTACA           GATTTATTTG CAG CAATTAAATC           TTTGCACTCTGGCGT  64 199
ONI09_RS02060 NONE
        mlaD  398436 ..  398451 +  -3.3   -4.3351   TAGTTCTAAAGTATT              TAAGG AATTTG CCTTA               TTTCTTGCCTTTTCT  60 85
       virB9  399813 ..  399825 +  -4.9  -3.01847   AACTTTTTCGAGTCG                TTGAT TCC ATCAA                TAATTGTATTTCTAT  52 491
ONI09_RS02100  404226 ..  404244 +    -3  -4.35524   GCTTATCTACTTTAT             TGCGGCTG TCC CGGTCGGA             TTTTAACTTTAGCAC  60 85
ONI09_RS02115  406842 ..  406865 +  -4.6  -3.34344   GTTATTATAGATTTA          GGTTTATCGA CAAT TTGAAAAACC           TTCATTCCAGCATCC  53 96
ONI09_RS02125 NONE
ONI09_RS02130 NONE
        zapA  410713 ..  410723 +  -2.4  -4.39287   ACTAAATACTTGTCA                 AGCG AGG CGCA                 TTTTAATATACTTAA  57 326
        rseP NONE
        bamA NONE
ONI09_RS02155  414759 ..  414772 +  -3.1  -3.08471   GAAAATACCTGAATT               TGCTT TGAA AGGCA                TTGAGTAGGCTTATG  45 4
        fabZ NONE
ONI09_RS02165  418270 ..  418304 + -15.2    -4.128   TCACTATTAAAGTTA     TCGGTCAGATTAGATT AAA AACCTAATCTGACCGG     TTTCTCTATAACCCT 100 172
ONI09_RS02170 NONE
         ffh  421523 ..  421539 +  -9.4  -2.87564   TTTCAACACGTCATA              CCGCGA TTCAT TCGCGG              TATCTCAGCCGCTAA  73 234
        surE  423355 ..  423369 +  -2.2  -4.31692   CACCTGTATCCATGT               TTTTAA TCT TTAAAG               TTTTACTACTCAATT  56 108
ONI09_RS02195  425523 ..  425535 +  -6.3  -4.42206   ATCTTAAAAAAAGTT                TTCGT TTA ACGAA                TTTCTTCCTTTGCTT  74 40
ONI09_RS02205  427309 ..  427319 +  -2.6  -3.91897   TAATTAATATTGCTT                 TAAA GTT TTTA                 TTTGTGCGTAAAGGA  53 38
ONI09_RS02210  428662 ..  428677 +  -4.7  -2.53964   ATCTCTTACAAAATT              CTCTG TCATTC CAGAG               CTCTCTTCTGTCATC  49 57
ONI09_RS02215  429804 ..  429832 +  -5.3  -3.90318   TTCCTTTATGACGGT        GTCATCCGAGT AGCTGAC ACTGGGATGGC        TTTGTCGCATCGTAC  63 93
        truA  431404 ..  431416 +  -6.3  -3.27779   AACTGCTTTGTAATT                TGGAA AAG TTCCA                TCTATTAATTTTGAT  58 477
ONI09_RS02255  436151 ..  436182 +  -9.4  -3.04122   AGTGTGATGCAACAA      AGCCATCCCAGTGT CTGG GCACTGGGATGACA       TCCTTTCTAGTGAAG  74 67
ONI09_RS02265  439111 ..  439128 +  -3.5  -3.14931   TAAGTAAAGTACGGG             GTTTAAT GACA ATTAAGC              TTAATACGCACTGAA  47 117
         rho  440682 ..  440702 +  -2.6  -3.62572   CTCTTATAGCTAAAA            TAATTTGG ATTTA CCAAAATA            TATTTATAGTTAAGT  48 85
         icd NONE
         nth  444131 ..  444145 +  -2.8   -3.9461   ACTTGACACATTTTG               CTGG AATGACA CCAG               TTGTTATTCAGACAA  53 87
ONI09_RS02300  447014 ..  447025 +  -4.4  -3.23115   TTTCCGAGTTAATAA                CCTT AAGT AAGG                 GTTTATCTTGTTTCA  51 357
        ligA  457885 ..  457917 +  -4.2  -3.55447   AAGAATCATTTTATT     GACTTGCC-TCAATT TTTC AACAGAAGGCAAGTC      TTCTGTGCTGAGTGG  55 106
ONI09_RS02405  469151 ..  469168 +  -2.8  -3.29511   GCGATTACAAAAATA             TATACT TATAGT AGTATA              TTATACAAAAATAGC  45 514
        purN NONE
        grxC  474488 ..  474517 +  -2.3  -3.00863   TCACTTTAAACAATT       CTTAATGAATT AAAAATAC AATTCATTCAG        TGAGTTTTTTTAGTG  42 89
ONI09_RS02445  475456 ..  475477 + -13.1  -4.88485   ATTACCTTTTGTCAT           CCAAGTAGC CAAG GCTACTTGG            TTCTTTTTTTGGTTC 100 69
ONI09_RS02450 NONE
        trxB  477791 ..  477811 +    -2  -3.65475   AATTCTAGGATTTTA           GATAAATTG CTTG CAATTT-TC            CTTTTCTTTTACATA  47 43
ONI09_RS02460  479506 ..  479524 +  -2.5  -3.13403   GCCAAGCAGTTGTTG             TATTGAT CTTAT GTCAATA             TCTTCCTGAAGCAAA  45 145
ONI09_RS02485 NONE
ONI09_RS02490  484229 ..  484251 + -10.6  -3.54424   GACATATTTTCATAT           GTGCACGCTT TCC AAGCGTGTGC           TTTAGACCACTCAGC  82 172
ONI09_RS02530  492454 ..  492467 +  -2.5  -4.08221   AATAGTAATTTGTTA               TTTAT ATTA ATAAA                TTTAATTCTATTGAA  53 42
ONI09_RS02535  493088 ..  493120 +  -6.9  -2.63922   GCTAGCGATGCAACA      AAGCCATCCCAGTGT CAA GCACTGGGATGACAC      CCTTTTTGGGTCCTC  61 246
ONI09_RS02545 NONE
ONI09_RS02550  495847 ..  495863 +  -5.1   -3.0747   ACGATAAAGTGGTTT              CTATGCT TAA AGCTTAG              TGTACTTTAATTATG  52 9
ONI09_RS02570 NONE
ONI09_RS02575 NONE
ONI09_RS02580  500503 ..  500527 +  -5.1  -3.04799   CACCTTTAGCTATTT          GTCTAAATGTT TTT AATATGTAGAC          TGTTAGGAAATTGTC  52 107
        rnpB  501262 ..  501274 +  -4.9  -2.95632   ACGCAGTGCTAGCAA                TTCTA TCA TAGAA                TACTCTTTATTAGTA  52 359
ONI09_RS02595 NONE
ONI09_RS02600  503655 ..  503665 +    -4  -3.38522   AGTACACGATGAATT                 TGAT AAC ATCA                 TATTTACAATAAATG  51 119
ONI09_RS02610  505854 ..  505867 +  -4.5   -3.2964   TCTTTATTTGGTAGG               GCAGG CTTA TCTGC                TTGTAACCAAGGTTT  53 369
ONI09_RS02650 NONE
ONI09_RS02655  513987 ..  513999 +  -7.7  -3.55444   AAAGCGGCTGAATCT                CGCTT GTC AAGCG                TTTAAAACATAAAAA  71 417
        terL  516147 ..  516169 + -12.2  -2.59079   CAATAACATAAATTA           CTTTAGCTAT GCT ATAGCTAAAG           TGGCTTAGGTTTACT  84 360
ONI09_RS02670 NONE
ONI09_RS02675  518109 ..  518123 +    -5  -2.83772   AATATTTCATTTATA               GAGATT TTC GATCTC               GTCTTTTCATCCACT  51 57
ONI09_RS02685 NONE
         rpe  520253 ..  520273 +  -9.8  -2.94747   ACAACAAATTCGTCA            TTCCGCTA CTCGT TAGCGGAA            TCTATGCTGAGATAC  76 85
ONI09_RS02710 NONE
ONI09_RS02715  525386 ..  525405 +  -4.4  -4.87665   AACAGAGTATAACTC            GC-ATGAAA TGC TTTCATTGC            TTTTTATACATGGAC  73 95
ONI09_RS02725  527870 ..  527880 +  -5.4  -3.75332   CTGGAATGACACCAT                 TTGC TGT GCAA                 TTTACCTTCAAAAAT  61 350
ONI09_RS02730 NONE
ONI09_RS02735  529171 ..  529206 +   -15  -2.75521   TCGGTAAATCTTTTA    GCTATAGAAGTTAACT TTGC AGTTAACTTCTACAGC     GTTTCAAAGTATAGT  95 105
        tsaD  530570 ..  530584 +  -4.4  -3.00825   TATGCTCTTTTGATG               TTTATT GAT AATAAA               ATTCTGTTTTATCAA  50 340
ONI09_RS02765  535178 ..  535203 +  -4.1  -4.14627   TCATCACGAATACGT         TTTATTTCCTG TTCG TAGGCAATAAA          TTCTTTCTCTGACCA  58 298
        ppdK  543424 ..  543444 + -11.2  -3.26262   CACCAGAGGGTGTCA            TTCCAGCG CGTGA CGCTGGAA            TCTAGTTTTTATTAT  87 79
        glpX  545793 ..  545803 +    -4  -4.35524   CTTATGTTAGCTTTT                 TTAG TTT CTAA                 TTTTAGCTTTACAAC  62 31
ONI09_RS02815 NONE
ONI09_RS02820  546930 ..  546947 +  -3.5  -3.23979   TAACTGTACTGTTGT             TCTAAAT ATAA ATTTAGG              TTAAGTTAGTATTAA  47 4
ONI09_RS02825  547406 ..  547419 +  -2.4  -4.46212   ACGTTGTATTTTAAC               GTAG GATTAG CTAC                TTTTATACTCACCAA  59 195
        carA NONE
ONI09_RS02840 NONE
ONI09_RS02845  549730 ..  549753 +  -4.8  -3.71448   TCCGCTCTTTTTTTT          TGTTGTATTTT TAT AAAAT-CAACA          TATTATTTATTGATG  59 31
         tuf NONE
        rpsJ NONE
        rplC  552024 ..  552038 +  -2.2  -2.60941   AAATGATGATGCTAG               TAATTT GGT AAGTTA               GTTATGGAATGTAAT  40 10
        rplD NONE
ONI09_RS02870 NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  555931 ..  555945 +  -2.2  -2.90075   GTTAATAGCTCACAT               TGAATA GGA TATTTA               TATGATTCAAAAAAA  41 23
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rplO NONE
        secY NONE
ONI09_RS02960 NONE
        rpsM NONE
        rpsK NONE
ONI09_RS02975 NONE
        rplQ  564175 ..  564192 +  -2.1  -4.05004   GTAGTTATACAAAGT             TAATTAT TATC ATAATTG              TTCTTCTTATGGTAA  52 23
ONI09_RS02985 NONE
        atpH NONE
        atpA  566672 ..  566686 +  -2.8  -3.70037   TGAGTAATTTTGTTA               CTCAAT TTA ATTGCG               TTTAGGTGGTAATTA  48 6
        greA NONE
        ribB  567848 ..  567861 +  -3.9  -2.74645   ATTACGTTAAAAAAT               TAAAC TAGC GTTTA                TAAATTTGTATAATT  45 18
ONI09_RS03010  569450 ..  569464 +  -4.4  -3.02424   CCCAAACATAACCAA               TAATAT TGC ATATTA               CTTTAGTTGTGTCAT  50 268
ONI09_RS03025 NONE
ONI09_RS03030  572781 ..  572805 +  -4.3  -2.79175   TGTAGATATGGAGCT          CCTAAAATTCA TGC TGAATTAAAGG          CTTTGGGTAAAAGTT  48 307
ONI09_RS03035 NONE
ONI09_RS03040  573821 ..  573856 +    -4  -2.96152   TCCCCACTCGACTTC    GAAACCGGA-CTTGTGA CTT TCACCACATCCGGCTTC    TCTCTAACTTGGTGT  46 480
ONI09_RS03050  575568 ..  575580 +  -4.8   -3.6878   GTATGATAGAAGGAA                CAGG GTAAG CCTG                TATTTTCGCCTATAT  57 240
ONI09_RS03055 NONE
ONI09_RS03060 NONE
        ltrA NONE
ONI09_RS03070 NONE
ONI09_RS03075 NONE
ONI09_RS03080  583291 ..  583307 +  -6.5   -3.7956   TGATGTATCGTTTGT              GCGACGT GAA AAGTCGC              TTATTAAATTGTTTC  66 248
        ltrA  585519 ..  585554 +  -6.2  -3.45571   ACGGTTCCTAGAGGA    GGGTTCGATGGGTAAA TATC TTAGTCCATTGAACTC     TTACTCTTTCAAGCG  61 164
ONI09_RS03090  586533 ..  586547 +    -5  -4.66418   TATTTAGATAACTTT               TAGGCT CCA AGCTTA               TTTGTTGTTCTTTTA  71 91
ONI09_RS03125  597165 ..  597177 +  -4.9  -3.15527   TTTAAATATAAACTA                CTATA ATT TATAG                ATTTTGGATCATTTT  53 72
ONI09_RS03155 NONE
ONI09_RS03160 NONE
ONI09_RS03165 NONE
ONI09_RS03170 NONE
ONI09_RS03175  602926 ..  602936 +  -2.6  -2.64274   TTCTAAGCGGAAAAA                 TTAA ATC TTAA                 TACCTTTACCCAAAT  41 15
ONI09_RS03180  604178 ..  604189 +  -4.4  -3.57908   CAGAACTTTAATATT                CACT GATA AGTG                 TTCTGCTATTTGATA  55 326
ONI09_RS03225 NONE
ONI09_RS03230  614540 ..  614552 +  -6.3  -3.23174   AAAGTTTGTGTGTGA                TTTGC TTT GCAAA                ATTTTCTGCAAGTGT  61 199
ONI09_RS03235  615230 ..  615252 +    -2  -2.60161   AAAGGGCAGAAAACG           CCATATTATT GTG GATACTGTGG           GTCTTGTAATTGCTG  40 39
ONI09_RS03240  615611 ..  615628 +  -2.1  -2.77701   TCACAAATTAGCTCA             T-TCTTCA GTT TGAAGACA             TGCTCTTAGTGAACT  41 13
        mutL  619119 ..  619130 +  -2.2  -3.46509   AAGGTTTGGTTAAAG                CAGG AGTT TCTG                 TTGATATTGTTGCAA  45 509
ONI09_RS03265  620914 ..  620926 +  -6.3  -3.72756   AATCTCTTTGAATTG                GCATA CTC TATGC                TTCTATCTGTTCTTC  63 348
ONI09_RS03400  644485 ..  644501 +  -8.7    -3.794   TAAAAGTGGGTCCTT              TCGGCCA TAA TGGCTGA              TTTGGTGGGTTCAAC  79 38
ONI09_RS03405  645860 ..  645871 +  -2.2  -3.76174   GTAATATTAATTTAC                TGGT ATAT ACCG                 TATTTTAATGAGTTT  50 93
ONI09_RS03410 NONE
ONI09_RS03415 NONE
ONI09_RS03420 NONE
ONI09_RS03425 NONE
ONI09_RS03430 NONE
ONI09_RS03435 NONE
ONI09_RS03440  654502 ..  654516 +  -2.8  -3.11704   TAGGAAAACCATTAA               TGCTTG AAC CAAGGA               GTTTTGAGCTATTGT  43 47
ONI09_RS03450 NONE
ONI09_RS03455 NONE
ONI09_RS03460 NONE
ONI09_RS03465  658321 ..  658341 +  -3.9  -3.78034   GTAAATCAGTATGGT            CAACTGGCA TAA TGCCACATG            TTATTGATATAGGTG  55 454
ONI09_RS03490 NONE
ONI09_RS03495 NONE
ONI09_RS03500 NONE
ONI09_RS03505  669561 ..  669577 +  -2.3  -2.87881   ATTATTTATCAGTTA              TTGACAT TAG GTGTTAA              TATATGAAAGCATTG  41 9
ONI09_RS03510 NONE
ONI09_RS03515 NONE
ONI09_RS03520 NONE
ONI09_RS03525  674482 ..  674492 +    -4  -3.21593   TGGTTTGCAAACTTC                 TTGT AAA ACAA                 TATTATACCAACATA  49 70
ONI09_RS03530  675876 ..  675895 +  -4.4  -4.77896   TAGCCATCACATCCT            TTAAGATT AAAA AATCTTGA             TTTTTAAATTCCTTC  71 161
ONI09_RS03550 NONE
ONI09_RS03555  680492 ..  680519 +  -2.1  -4.19624   TTTTTCCACCCTTAG        CTCCTAAGCATA AAAGC TATGCGTAG-AG        TTTGTGTTAAGAATA  54 464
        ligA NONE
ONI09_RS03575  683360 ..  683373 +  -5.3  -2.79188   GCGTGCGATCCGATG               TCATG AAAT CATGA                TGGTTAAATTCCATC  52 12
        ltrA  685612 ..  685635 +  -9.6  -3.09193   CGGTTTCGAAGTCGA          GTGGGGAGAG GTGA CTTTCCTCAC           TTAGATAACTCTAGT  77 12
ONI09_RS03585  686081 ..  686096 +  -2.6  -5.19212   ATGGTTATGTGAAAT              TACGAT TGAT ATTGTA               TTTTTTAATAATGCT  70 327
ONI09_RS03600 NONE
ONI09_RS03605  688968 ..  688983 +  -3.2  -3.48269   TTTCGCTCATAATAC              GCTTTG CACA CATAGC               TTCCTGTTTAGTAAA  50 441
ONI09_RS03630  697347 ..  697359 +  -4.9  -3.15527   TTTAAATATAAACTA                CTATA ATT TATAG                ATTTTGGATCATTTT  53 72
        fumC  703689 ..  703702 +  -2.5  -6.23209   CTGGTTTCTTGGTAC               TTATT CCGC AATAA                TTTTTTTTTCCTTCA  95 220
ONI09_RS03685  705565 ..  705582 +  -4.1  -4.59376   GGGCAAGCTTTGCTA             TTGCATC TGCA GCTGCAA              TTTTCATTTCATCAT  66 306
        pgsA  707380 ..  707407 +  -2.2  -3.31461   AAAGGTGTATAATTA        TATTAACTTA CAACTAAT TAGGTTAATA         TTATGAAAATACCTA  44 107
ONI09_RS03700  708408 ..  708427 +  -2.2   -2.8478   TTTGATCGAAAAAAA            TCTTATGT ATAT GTATAAGA             CTTTAATCACGTGCT  41 82
ONI09_RS03705  709101 ..  709133 +  -5.5  -4.03989   ATTAGCAGAAAACCT      GCAAGATGCCAAGCC GGA GGCTTGAAAATTTGC      TTTAGCTTTTTCTAT  63 1
ONI09_RS03710  709931 ..  709946 +  -2.6  -4.45168   TAAGCTATGAGGCTG              GTAATA TTTG TATTGC               TTTGTATTTTACCAG  58 31
ONI09_RS03715  710161 ..  710171 +  -6.8  -2.57013   TTGTGTGCCTAGACA                 CTGG GAT CCAG                 TAAATTCAATTACAA  56 12
ONI09_RS03725 NONE
ONI09_RS03730  711937 ..  711949 +  -2.7  -2.73364   ATGCACAACCGACGA                TTAGT TTA GCTAA                TAATTAGCATAGAAG  41 6
ONI09_RS03735  712281 ..  712307 +  -4.5  -4.94902   GTTCATTGTCTTAGA        TTG-GCTATGGT CTTT ACCAGAGCTCAA         TTTTTGTGGTGCTTA  73 27
ONI09_RS03740  713291 ..  713311 + -11.2  -2.91383   CGCCGCAGACCGTCA            TACCGCGA TTCAT TCGCGGTA            TCTCTAGATCCCGCT  83 244
ONI09_RS03745  715375 ..  715389 +  -5.8   -2.7736   CACAACACTTAAAAT               GTAAAA TGG TTTTAC               TAATTAAGTATAAGT  55 67
        lepA  717447 ..  717459 +  -7.7  -3.53012   ATATAAGCCGAAACG                CGCTT ACA AAGCG                TTTAAGACAGCAAAA  71 262
ONI09_RS03755  718709 ..  718727 +  -5.3  -2.72739   AGTGGTCTTAAGGTT             CTGAGGT CAATA ACTTCAG             CTTCTATACCTTCAC  51 278
ONI09_RS03770  721926 ..  721939 +  -3.1  -5.24551   CAGAATCGCAATATG               GTATG ACTA CATGC                TTTTTATTGATTTGA  74 282
ONI09_RS03775 NONE
ONI09_RS03780 NONE
ONI09_RS03785  725813 ..  725823 +  -3.2   -3.5764   GAGAGAGAGTAGGAT                 CTCT CAG GGAG                 TTTGAGGGTCGAGTT  50 99
ONI09_RS03790  726404 ..  726415 +  -5.8  -3.08133   TGATCGCTAACATCT                CTGC ATGT GCAG                 TTGGATCGCTGGATA  56 372
ONI09_RS03810  729520 ..  729538 +  -4.5  -4.02733   CTTTAGCTTGTAACT             GTTGCTG TAAGT CCGCAAC             TTCTTGTGTATTTTG  61 399
ONI09_RS03820  732741 ..  732754 +  -5.3  -3.00018   CACTTCCTTTGATAT               CTATG CTAT CATAG                TCATTATTGGTTGTG  54 53
ONI09_RS03825 NONE
ONI09_RS03830 NONE
        pyrF NONE
ONI09_RS03840  737494 ..  737518 + -14.3  -4.81851   TAAGCTTACAGTGCT          GAGCGTGGCAC AAA GTGCCACGCTA          TTTTTCGGTTTACAT 100 176
ONI09_RS03850  738740 ..  738752 +  -3.3  -2.56864   GATGCAACAAAGCCC                ACTGG AAT CCAGA                AATTTTGCTTATAAC  42 72
ONI09_RS03860  740376 ..  740396 +  -9.8  -2.94925   AACACAAATTCGTCA            TTCCGCTA CTTGT TAGCGGAA            TCTATGCTGAGATAT  76 203
ONI09_RS03880  743422 ..  743438 +  -3.7  -3.16288   GTGAGTAACCCTACT              CTCAC CATCAAT GTGAG              TATTACTGGAATTTG  48 272
ONI09_RS03895 NONE
ONI09_RS03900  746155 ..  746175 +  -4.7    -3.797   GTTTTCCTACTGTCA            TCCTAGC ACGTGAC GCTGGGA            TCTTTATTGCTTTCA  59 112
ONI09_RS03905  746849 ..  746859 +  -2.6  -3.17229   AAAAAATAAGGTAAT                 TTTA TGC TAAA                 TATTAATAATAAGGT  45 158
ONI09_RS03910  748848 ..  748862 +  -2.1  -4.01088   TATGTATTTTTTTTG               CTCTT TTTCT GAGAG               TTCTGTTTTGATATC  53 288
        ychF  752357 ..  752378 + -11.7  -4.42386   CCACTTTCTATGCTA           GTTTGCTTG CTTA CAAGCAAAC            TTTTCTGGATCCAAG  95 421
ONI09_RS03935 NONE
ONI09_RS03940 NONE
         gmk  756373 ..  756385 +  -4.9  -3.76789   ACTATGACGGCAAAT                TTTCT CAC AGAAA                TTAATTTTCTGCCTT  59 180
ONI09_RS03950 NONE
ONI09_RS03955  757200 ..  757222 +    -2  -2.60161   AAAGGGCAGAAAACG           CCATATTATT GTG GATACTGTGG           GTCTTGTAATTGCTG  40 39
ONI09_RS03960  757720 ..  757736 +  -2.3   -3.4072   GAGCGAGTAAAGCAA              GCAATTT CAG AAATTAC              TTATAATAGCAGATA  45 152
ONI09_RS03980  765359 ..  765377 +  -4.6  -2.82834   TGATATAGAAATTTA             CTTTCTTA ACT TCAGAAAG             TATACTCATACGATG  48 67
ONI09_RS03985  767627 ..  767637 +    -4  -3.14881   TATGCTAGCATTTTT                 TACT GTG AGTA                 TTACTACCAAAGTTA  48 187
ONI09_RS04025  772553 ..  772581 +  -6.8  -2.80479   ATAAAGTTACAAAAA        CTTCTGCATCAT TGCTT GTGATACAGAAG        TCACTTTTCATTCCA  58 37
        pheT  775054 ..  775064 +  -2.6  -3.20164   TTACTTCATCCAATT                 TATT TCC AATA                 TTGAATTCAATATCC  45 78
ONI09_RS04045  783046 ..  783057 +  -4.4  -4.50358   ATATATGGGCTTTTA                CCAA TAAT TTGG                 TTTTGGTGTTTACCT  66 289
        pdhA  786276 ..  786314 + -19.1   -2.7728   ACGGCAGTAGCCCCT   TCGGTGTCATTCCAGTG CTTGA CACTGGAATGACACCAA   TAATTGACATTTCAC 100 356
ONI09_RS04070  787345 ..  787375 +  -6.2  -2.72126   TATTAGGCTAATTAA      TGC-GCAGGCAGT AAGATA AATGCCTGCTGCA       AGTTTTGTTTCGGTT  54 93
ONI09_RS04085 NONE
        ccmA  792085 ..  792106 +    -3  -4.46212   CTGCGGCGGTATGAC           GTAGAGCT CGCGTT AGCTATAC            TTTTATACTCACCAA  62 445
ONI09_RS04100  794030 ..  794042 +  -7.7  -3.53012   ATATAAGCCGAAACG                CGCTT ACA AAGCG                TTTAAGACAGCAAAA  71 236
ONI09_RS04130  801172 ..  801199 +  -3.4  -2.56596   GCTCCTTTTTTTGTC        AT-CCCATTCTGG GAT CCAGATTGGGCAC        TAAGTTGGTAAACAC  42 174
         tkt  808699 ..  808727 +  -9.6  -4.20516   TCCATCCAAGACGGT        GTCATGCCAGTG CGTGA CACTGGGATGGC        TTTGTTGCATCACAC  86 336
ONI09_RS04190  810313 ..  810333 + -11.2  -2.80307   TTAGAGAGGATGTCA            TTCCAGCG CGTGA CGCTGGAA            TCTAGTAAACCTTTA  83 432
ONI09_RS04225  819783 ..  819798 +  -4.8  -3.87994   TCATATATTTTCCTT              TCATAT CATC ATATGA               TTTCTCACACTCACT  61 81
ONI09_RS04235  821483 ..  821516 + -10.3  -2.58767   TTCTTTGTTCTAGCG     TAGTCAGACCCAGCGC GGC GCGCTGGGA-TGACAA     TGGATTACTAATTAG  78 60
ONI09_RS04250  824549 ..  824569 + -11.2  -2.94218   GCCCCTTTCTCTTCA            TCCCGCTA CTTGT TAGCGGGA            TCTATGCTAAGAGAT  83 192
        prfB NONE
ONI09_RS04265  827922 ..  827933 +  -5.8  -3.48519   GATCTAGTATATTGG                GAGC TACA GCTC                 TATTATCTGTTTGTT  61 464
ONI09_RS04330  839056 ..  839072 +  -9.4  -2.87564   CCGCAGAACGTCATA              CCGCGA TTCAT TCGCGG              TATCTCAGCCGCTAA  73 98
ONI09_RS04360  842986 ..  843012 +  -5.9  -4.04764   AGGCATAGTTCATAG         CTTGGCAGCAA TCTTC TTGTTCCCAAG         TTTATCAATTATTTT  67 26
ONI09_RS04365 NONE
ONI09_RS04370  844293 ..  844320 +  -7.9  -3.38046   ATGTAATCCCATCCA        GGAGAAATAGT TTTTAC ACTATTTTTCC         TCTTTAGCATCAACC  69 41
ONI09_RS04380  846725 ..  846735 +  -5.4  -3.90358   AGTTATGTGTACCTT                 TTGG CAG CCAA                 TTTAATATGTACTCT  63 222
        dnaG NONE
ONI09_RS04400  851672 ..  851682 +  -2.6  -2.71831   TATAAAGTTATTATT                 TAAA AGT TTTA                 GTATGTTTTTCGAGA  41 23
ONI09_RS04405  852971 ..  852982 +  -5.8  -3.48519   GATCTAGTATATTGG                GAGC TACA GCTC                 TATTATCTGTTTGTT  61 460
        ccmC NONE
ONI09_RS04450  856600 ..  856612 +  -6.3  -5.35354   GTTCATGTGATTCCG                CAGAA TAA TTCTG                TTTTTTGATTCTATC  89 103
ONI09_RS04460  859804 ..  859815 +  -4.4  -2.82036   GAAAGAAGACAAAAC                CAAG AACA CTTG                 ATTTACATGATATAT  48 193
ONI09_RS04470  861037 ..  861047 +    -4  -2.52543   TTAAATAATCTTGCT                 GAAA AAT TTTC                 TCAATTAGAGAAGAT  45 37
ONI09_RS04475  863192 ..  863209 +  -4.9  -3.26473   GCAACTTAAGTGGGG             CGCAAAA GGTC TTTTGTG              TTGATAATAATTTAA  54 60
        infA NONE
ONI09_RS04485  864458 ..  864473 +  -6.2  -3.89881   CCACTGGTTTTAGTG              GAAACT TCTG AGTTTC               TTTATCCAACTTACT  65 376
ONI09_RS04515  871194 ..  871210 +  -2.9  -4.34345   GTATCCTCTTCGGCT              GATTCTG GTT CAGGCTC              TTTTCCTGCTGTGTC  57 297
ONI09_RS04525  873427 ..  873437 +  -8.2  -2.98088   TGTCCATAAAGCTCA                 CCCG AAT CGGG                 TATATGCATTTGCCA  68 72
ONI09_RS04530 NONE
        lpdA  875847 ..  875861 +  -2.2  -4.18465   GGTCAACGACCGAAT               TGAAAA GAA TTTTTA               TTATATTTTTTAGCA  56 288
        murG  877487 ..  877497 +    -4  -2.87621   GATCCACTACTACTT                 GAAT ACT ATTC                 TCATCTTGTATTCTT  46 429
ONI09_RS04560  878974 ..  878984 +  -2.6  -3.41602   TTCTTAAGGATTGTG                 TTTA ACT TAAA                 TTCTGGTAAAATGAC  47 117
         tig  880358 ..  880368 +  -2.6  -3.44848   AAAGAATTAAAGGAA                 TTAT TTG ATAA                 TATTTAATAGGAAAA  47 8
        clpP NONE
        clpX  882280 ..  882290 +  -2.6  -3.57387   GCAATGTTATAACGG                 TTAA TGA TTAA                 TTTGAGGCATATATT  48 15
         lon  884820 ..  884843 +  -3.8  -4.55093   AATCCACCAACTTGT          GCATCCCATA AGGA TATGGCTTGC           TTTGTTGTTATGTCA  65 86
ONI09_RS04585 NONE
ONI09_RS04590 NONE
ONI09_RS04595  888793 ..  888803 +  -5.4  -2.73124   TATAAGCTGAAATGC                 GCTT ATA AAGC                 ATTTAAAACATCAAA  51 228
ONI09_RS04600 NONE
        recJ  892003 ..  892017 +  -5.7  -3.87925   CCAGTTCTTTATAAT               CTACC AAACC GGTAG               TTCTGTTTACTACTT  61 298
ONI09_RS04625  894981 ..  894994 +  -5.2  -2.64551   CTAAACTGAAACAAA               GCGC AACATA GCGC                ATTGTAAATGATTTT  51 55
        groL  896713 ..  896734 + -15.9  -2.71144   CTAAGTAGAATGAAA           CCGTGGAGC AATT GCTCCACGG            TAGTTCCAAAAAATC 100 37
        ltrA  909335 ..  909370 +  -6.2  -3.45571   ACGGTTCCTAGAGGA    GGGTTCGATGGGTAAA TATC TTAGTCCATTGAACTC     TTACTCTTTCAAGCG  61 164
ONI09_RS04685  910348 ..  910362 +  -2.8  -5.01823   ACATCATTAAAACTA               CTCTTA GGC TGAGGG               TTTTCTTGTTGTTCT  68 90
ONI09_RS04705  917419 ..  917437 +  -7.6  -3.18766   TCGATCTTGCAGCTA             CTTAAAAA CTA TTTTTAAG             GTTTTAAATTATACC  67 21
ONI09_RS04710 NONE
ONI09_RS04715 NONE
ONI09_RS04720  921088 ..  921102 +  -4.2  -2.70932   TACAGCATTAGGCAG               GCTTTG TTG CATAGC               TAGTTAACAAGCAGA  47 180
ONI09_RS04860  941112 ..  941128 +  -2.3  -3.36289   TAAGGAAGCGCTTGA              TAGGTTT AAT AAACATA              TTAGTTGCAATACTG  45 44
ONI09_RS04865 NONE
ONI09_RS04870 NONE
ONI09_RS04875 NONE
ONI09_RS04885 NONE
ONI09_RS04900 NONE
ONI09_RS04905  948758 ..  948768 +    -4  -4.09243   TTATTTTAAGAGGAT                 CATA ATG TATG                 TTTTGGAGAGATCTA  59 21
ONI09_RS04910 NONE
ONI09_RS04915 NONE
ONI09_RS04920 NONE
ONI09_RS04925 NONE
ONI09_RS04930 NONE
ONI09_RS04940 NONE
ONI09_RS04945 NONE
ONI09_RS04950 NONE
ONI09_RS04955  955271 ..  955298 +  -2.1  -3.33162   CAAATTGCAGAGGAG       CCGTA--TGACGG TAAC CTGTCACGTACGG        TTCTGCAGTCGAGTG  44 48
ONI09_RS04960  955506 ..  955516 +  -6.8  -2.87931   ATGATTATGAAAAGG                 CTGG ATC CCAG                 TGTCTGGGCACTGGG  58 89
ONI09_RS04985  960599 ..  960619 + -11.2   -2.7728   CACGGTATCTCTAGA            TCCCGCTA ACAAG TAGCGGGA            TACTTGACCTTTACA  83 454
ONI09_RS04990  962568 ..  962581 +  -3.9  -4.61147   ATATTTTTATAGAAA               TCTAT TAGT ATAGA                TTTTGTATGCTGTTC  65 129
ONI09_RS04995  964272 ..  964283 +  -5.8  -3.42182   AGTGGCATTGAATTT                TGGG GTGA CCCA                 TTAATCCTTTTTAAT  59 211
        gatA  968630 ..  968641 +    -3  -4.12037   TTCGATTTTACACTA                GAAT AAAA ATTC                 TTTATGCTATTTATA  55 471
ONI09_RS05020  969508 ..  969532 +  -4.3  -2.79175   TGTAGATATGGAGCT          CCTAAAATTCA TGC TGAATTAAAGG          CTTTGGGTAAAAGTT  48 307
ONI09_RS05025 NONE
ONI09_RS05030  970282 ..  970296 +  -4.2  -3.71794   TCTCCAACTCAGGTT               CATCCT GAT AGGCTG               TTTGGATGCTTAAAT  57 214
        coaD NONE
ONI09_RS05055 NONE
ONI09_RS05070  974425 ..  974446 +  -4.5  -6.12328   AGTATATCCTTTTCT           TTGATGG ACAATTCA CCATCAA            TTTTTTTTATATTAT  95 106
ONI09_RS05095  977758 ..  977773 +  -2.6  -3.12847   ACTTGACATGGCATG              GTATTG TAAT TAATAC               TTAAATAGGTTTGTT  43 106
        yajC NONE
        glmS  980174 ..  980194 +  -9.8  -2.87564   GATACACAATCGTCA            TTCCGCTA CTAGT TAGCGGAA            TCTATGCCGAGATAC  76 112
ONI09_RS05110  981797 ..  981810 +  -3.1  -4.11394   TTACTGCATCTTTTA               CTTTG TTGC CAAGG                TTTTCCAAGTCAGAT  57 499
        odhB  985752 ..  985763 +  -2.2  -4.35483   TACAGCCCGTGCAAA                CGAC TCCT GTTG                 TTTCTTGTGGTCACC  56 155
        secA  993133 ..  993143 +  -3.2  -3.74345   ACAACAGTAATTCCT                 GCTG TTA TAGC                 TTTAGGTCTATGAAT  52 240
ONI09_RS05175  996160 ..  996184 +  -4.3  -2.79175   TGTAGATATGGAGCT          CCTAAAATTCA TGC TGAATTGAAGG          CTTTGGGTAAAAGTT  48 181
ONI09_RS05180 NONE
ONI09_RS05185 NONE
ONI09_RS05190 NONE
ONI09_RS05220 1003131 .. 1003145 +  -3.6  -2.65504   ATCCAGAAAAATTGA               TTGTGT ACT ATACAA               CATTTTTGATCAAAA  45 179
ONI09_RS05270 1010680 .. 1010715 +  -9.3  -3.20953   TGTTTTCAAGGTCTG    GAGAAGATCTATA ATTATTGGTA TATAGATCTTCTC     ATTTTCAGTTATTAC  77 12
        yihA NONE
        argB 1014489 .. 1014509 +  -5.4  -2.91383   CAGCAATCTACGTCA            TACCACGA TTCAT TCGCGGTA            TCTCTAGGTCCCGCT  52 105
         dut NONE
ONI09_RS05300 1015987 .. 1016007 +  -2.5  -5.23943   CCAAGTGAAATAAAA            GAGGTAAAT TAA GTCTGCCTC            TTTGTTTTTTTAGTG  72 41
ONI09_RS05305 1016597 .. 1016607 +  -6.8  -2.87931   ATTTTCGATCAAAAG                 CTGG ATC CCAG                 TGTCTGGGCACTGGG  58 304
ONI09_RS05330 1020060 .. 1020075 +  -3.2  -3.14132   AAGCTGAAGTCTTTC              ACTGCA TCTG TGCAGA               TTAATGCCAAAGGAA  47 141
ONI09_RS05360 1025625 .. 1025637 +  -4.1  -3.24597   ATAATGCTCCCGTAG                TTAGC TGT GCTAG                TATTAATTAAAAATT  51 26
ONI09_RS05365 NONE
ONI09_RS05370 1028558 .. 1028568 +  -2.6  -3.34267   TCCAAAACAGCAAAA                 TTAT TGT ATAA                 TGTTACTTTGAAGTT  47 189
ONI09_RS05375 NONE
        pyrE 1030359 .. 1030380 +  -2.3  -2.92175   AAAACCTGGGAGTAG           GGAATATTT AACA AAGTAATCC            TATAATATCTTGAAA  41 7
        typA NONE
ONI09_RS05390 1033032 .. 1033044 +  -4.8  -3.37755   GTATTACAGAAGGAA                CAGG GTAAG CCTG                TATTTCCGCCTATAT  55 239
ONI09_RS05395 1033441 .. 1033455 +  -4.3  -3.66117   AACAAAAACCAAAGG               TCTTG AGATA CAAGA               TATTTGTATGGTTAC  55 265
        clpB NONE
ONI09_RS05405 NONE
ONI09_RS05410 NONE
ONI09_RS05415 1042900 .. 1042930 +    -7  -5.42259   ACATTTGTGGAAAAG       GTAGGAGTTTAT CTGCATA ATAATCTCCTAC       TTTTTTTGACACTGC  95 340
ONI09_RS05430 1045569 .. 1045599 + -16.3  -3.39749   GTTTACAACAAATGG       TGTCATCCCAGTG CTTGA CACTGGGATGACG       TTATACGGTTCTTGG 100 123
ONI09_RS05440 1047226 .. 1047238 +  -7.7  -3.32022   AACTTACCATATATA                TGTCC ATA GGACA                TTGGTATATAAGAAC  67 136
ONI09_RS05445 NONE
        tsaB 1049206 .. 1049224 +  -8.2  -4.06295   ATCACACCTAAGTAC             CACAGGAA GGA TTTCTGTG             TTCATTTTTTTACTA  79 263
ONI09_RS05460 NONE
ONI09_RS05465 NONE
ONI09_RS05470 1050943 .. 1050955 +  -2.7  -4.53705   CTGGGCAAAGAAAAA                GAGTA AAG TATTC                TTTTATATAGAAATT  60 20
ONI09_RS05475 1051666 .. 1051678 +  -6.3   -3.1577   TTTATAACAAATAAC                GTAGA CAT TCTAC                TATTAACTATTGCAT  61 367
        rpmH 1055660 .. 1055673 +  -5.3  -4.24204   GCAACTACGAATGCT               TGCTA AAAT TAGCA                TTTTAAATATAAGTA  66 236
ONI09_RS05505 1056513 .. 1056525 +  -6.9   -3.1634   AGACCTCGTTTTGAG                GTGGG TTT CCCGC                TTAGATGCTTTCAGC  63 397
ONI09_RS05520 1060545 .. 1060573 +  -2.5  -3.08912   ATCCGAAAAACCTAA        CTTAAAAATCGCT CAA AATGACTTTTAAG        TATCTATATATAATA  43 21
ONI09_RS05525 1062677 .. 1062689 +  -7.7  -3.53012   ATATAAGCTGAAACG                CGCTT ACA AAGCG                TTTAAGACAGCAAAA  71 310
        guaA 1065153 .. 1065169 +  -5.9  -3.93288   AAAATGGCGATTATT              TTTAACC CTG GGTTAGA              TTTGATTAACTGGGC  65 236
ONI09_RS05540 1066343 .. 1066355 +  -4.1  -3.73359   CAAAAAGTAAGGAGC                TCCTT TTG GAGGA                TTATATTAACTTATT  57 106
ONI09_RS05545 NONE
        mutS 1070272 .. 1070283 +    -3  -4.99035   CTTTACAAAACTTCA                TCTA CATC TAGA                 TTTTTATCTAAATAA  68 248
ONI09_RS05555 1072306 .. 1072318 +  -6.3  -3.35197   GCTTGACACTGGGAT                CTAGA AAA TCTAG                TTAATATATATAGAG  62 264
        coaE 1072977 .. 1072989 +  -7.7  -2.91383   CGTAGCTCTACGTCA                TACCG CCG CGGTA                TCTCTAGATCCCGCT  64 36
ONI09_RS05565 1073359 .. 1073379 +  -2.7   -3.4691   TTCAATAGAATTAAA            TTTATTAAT ATA AATAATAAA            TTACTATTCTTAAAT  47 138
ONI09_RS05570 1075269 .. 1075281 +  -6.3  -3.28712   AGAACTGAAGAAGCT                TTCTG CAA CAGAA                TTGTCGCAACAACAG  58 240
ONI09_RS05605 1079462 .. 1079473 +  -2.2  -4.45485   CGGGTTCATGCACAA                CTCT ATCA GGAG                 TTTTGTGACTGTGAT  58 58
ONI09_RS05640 NONE
ONI09_RS05645 1085616 .. 1085638 +  -2.8  -3.87151   GTTAATATGATCAAC           TATAACAG ATTTTGC CTGTTGTA           ATTTTTCTTGTTTTT  52 253
ONI09_RS05655 1087031 .. 1087047 +  -2.3  -2.81225   ATTTTAGGGTTATTG              TTTTTGG TTG CTGAAAA              TAGTTGCGTTATCTA  41 69
ONI09_RS05660 1088010 .. 1088022 +  -2.7  -2.88999   ATTTAATAAGCTTAA                CGTAA CCA TTATG                TATGCTATATAGCAA  42 69
ONI09_RS05665 NONE
ONI09_RS05670 1089813 .. 1089833 + -11.2  -3.08992   CGCCGCGAACCGTCA            TACCGCGA TTCAT TCGCGGTA            TCTCTTAACATAGAT  84 100
ONI09_RS05675 NONE
ONI09_RS05680 1091957 .. 1091968 +  -3.6  -3.25204   GTAATAGGAACCATA                GGGC TAAA GCTC                 TCTATTTAAACCTAA  49 5
ONI09_RS05685 1092536 .. 1092554 +  -3.9  -3.93367   ATCCAAAGAGTGCAA             GAAACAG CACTT TTGTTTC             TATTTTATTGCAACA  57 224
ONI09_RS05710 NONE
        dnaQ NONE
ONI09_RS05720 1102485 .. 1102504 +    -2  -2.75769   TTCTGTTAATTAGTC            GAGCATGC AACT GCATGAGC             ATTATGATTTGAGAG  40 52
ONI09_RS05725 1102770 .. 1102784 +  -5.8  -4.06384   ATTACAAGGTTAGTC               TAAACT CTC AGTTTA               TTTATAGTCTTGGAG  67 172
ONI09_RS05730 NONE
ONI09_RS05735 1104060 .. 1104071 +  -4.4  -2.93858   TCAGTTTAAAAATGT                TGCT AATC AGCA                 TATATGAATGTAATA  48 64
        gyrB 1106589 .. 1106617 + -10.4   -4.2123   TTCCTTTATAACGGT        GTCATTTCAGTG CTTGA CACTGGAATGGC        TTTGTTGCATCGCTC 100 110
ONI09_RS05745 1107706 .. 1107716 +  -6.8  -4.08307   ATGCAACAAAGCCCA                 CTGG AAT CCAG                 TTATTTGGATTTTGA  69 73
ONI09_RS05750 1108285 .. 1108298 +  -3.1  -2.89421   AAGGTCATAATTAAC               CGTGA AAGG TTACG                TGTAATGCTTCTTCA  44 31
        pheS NONE
        glmU 1121732 .. 1121743 +    -3  -4.99035   CTTTACAAAACTTCA                TCTA CATC TAGA                 TTTTTATCTAAATAA  68 278
        rplU NONE
        rpmA NONE
ONI09_RS05850 1123167 .. 1123186 +  -3.6  -3.87627   TCTTTCCAGACCCAC            CATTTAGT AGTT ACTAACTG             TGTTTTCTATAGCGG  55 24
        metK 1124386 .. 1124399 +  -3.9  -3.58396   TAATAGTAAAATTTC               TTTAG ATTG CTAAA                ATTTTTGATTTACAG  52 13
ONI09_RS05860 NONE
ONI09_RS05865 NONE
ONI09_RS05870 NONE
        ruvC 1127467 .. 1127482 +  -2.6  -4.74406   AGAAGCTTTCGTCTT              GTAAGT ATAT ATTTAC               TTTATATTTTTTTAT  65 216
        gatB 1130478 .. 1130492 +  -4.3  -2.96237   GACATATAACTTTTT               TACCA TTTGT TGGTA               CTATTTTTAAAATTA  50 115
ONI09_RS05895 NONE
ONI09_RS05900 1134162 .. 1134179 +  -4.1  -3.32993   CCTGAAATAAAGCAT             GGTATTG AACA CAAAACC              TTGATGTATGGGTAA  51 345
ONI09_RS05935 1138488 .. 1138506 +  -2.4  -4.22949   AGTCCCACCACATTG             CTTCACAA ATT TTATGGAG             ATTTTTTTTTACAAA  54 31
        ftsA 1152264 .. 1152280 +  -3.1   -4.0777   ATCCATAGGACTTAT              TTTTATA ATA TGTAAAA              TTATTATGTTTATGT  55 84
         map 1153159 .. 1153171 +  -2.7  -4.07885   GCAACTATACTTGGT                TTACT TTG GGTAA                TTTTGAAGAAAGCTC  53 64
        rsmH NONE
ONI09_RS06015 1156142 .. 1156166 +    -8  -2.75159   AGCAGTGTCAGCTAC          TTGCATAACA CCATT TGTTGTGCAA          CTTACTTTAGTATGA  66 301
ONI09_RS06025 NONE
         pth 1158170 .. 1158184 +  -2.2  -4.28361   TCAAAATAGTGTGGA               TTTTAT ATG GTAAAA               TTTTAATCAAATTAC  57 423
ONI09_RS06050 1160685 .. 1160705 +  -2.7  -4.08221   ATTTAAGAATAGTAA            TTTATTATT TAC ATTAATAAA            TTTAATTCTATTGAA  53 35
ONI09_RS06070 1163405 .. 1163429 +  -4.3  -2.79175   TGTAGATATGGAGCT          CCTAAAATTCA TGC TGAATTGAAGG          CTTTGGGTAAAAGTT  48 198
ONI09_RS06075 NONE
ONI09_RS06080 NONE
ONI09_RS06085 1164238 .. 1164252 +  -2.8  -3.99938   GGATAGGGGCAACTC               TATCAC CCT GTGTTA               TGTTTATTTTCTAAC  53 273
ONI09_RS06115 1167678 .. 1167688 +  -5.4  -3.08015   AAAGCAATACTGAGA                 GTAG CAC CTAC                 TGTTAACATAGTTAC  53 204
ONI09_RS06130 NONE
        rpsO NONE
         pnp 1174157 .. 1174191 +  -5.7  -2.97653   CTTCTTGCGTTACCT     CTCGTCATTCCAGTG CTTAA CACTGGAATGACACC     CTTTCTGGTGAAGGT  54 48
ONI09_RS06160 1177253 .. 1177276 +  -5.2  -3.10597   CAACAAAGCCATCCC          AGTGTCACGC ACTG GCATGACACC           CTTTTGGATAGAAAC  54 76
ONI09_RS06170 1183394 .. 1183408 +  -2.2  -3.21182   TTACTATATGTAATG               TTTATT TAG AATGAA               TGTATGTTATTAATT  44 77
ONI09_RS06175 NONE
ONI09_RS06180 1184206 .. 1184218 +  -7.7  -2.56864   ATGGTGTCATTCCAG                TCTGG AAT CCAGA                AATTTTGCTTATAAC  63 81
        uvrA 1187395 .. 1187405 +    -4  -4.13654   TTAATCATTATTGAC                 TATG TTG CATA                 TTTATGATTTGGAGA  59 49
ONI09_RS06190 1187912 .. 1187928 +  -5.1  -2.89743   AGTGAAAGAGTGTAA              GCTTAAG TTA CTTTAGC              TATACTATATAAATT  51 197
ONI09_RS06195 1188712 .. 1188734 + -10.7  -3.81806   TAGCAGTCAGTATCA           TCCAAGTAG CTTGA CTACTTGGA           TCTATTTTTTTCTAG  90 38
ONI09_RS06200 1188990 .. 1189000 +  -2.4   -4.2123   TCTTTTTTTCCTGGA                 TCCC AGT GGGC                 TTTGTTGCATCGCTC  54 159
ONI09_RS06205 1190132 .. 1190165 +  -9.2   -3.1637   GTTTGTACAGTTATG     CATTTGTTGTGCAAA TTACC TTTGCA-AACAAATG     TTCGTACAGCTGTGT  77 116
ONI09_RS06225 NONE
        dapF 1193843 .. 1193869 +  -5.2  -5.69068   GTGCCGTTTGGCCTG         CTACAAAACCAA CGA TTGGCTTTTTAG         TTTTTTCTGTTTTTA  88 204
ONI09_RS06280 1202011 .. 1202027 +  -3.7  -2.89683   AAAAAAATTTTCTAA              TGCAAAA GTT TCTTGCA              TATATACAATAGAAT  46 60
ONI09_RS06285 NONE
ONI09_RS06290 1204049 .. 1204069 + -11.2  -2.91383   AACAGCAGTCCCTCA            TACCGCGA TTCAT TCGCGGTA            TCTCTAGATCCCGCT  83 317
ONI09_RS06300 1207061 .. 1207074 +  -2.3  -4.43844   TACTTTATTTTAATT               TCCCG ATAA CGGAA                TTTTATGAGTGATAG  57 108
        sdhC NONE
        sdhD 1207813 .. 1207825 +  -3.3  -3.42378   ATTTTCTTGTAAAAT                CACCG GTG CTGTG                TTAATATGTTATTAG  48 29
ONI09_RS06315 1209236 .. 1209259 +  -8.4  -3.07816   TTGCCCTCAGTATAA          GATATTAATT ATTT AATTAATATC           TTAACTAAATGCGCC  68 105
ONI09_RS06320 NONE
ONI09_RS06325 1211953 .. 1211991 +  -6.2  -3.05616   ATTATAAAAGCACAA  GCTCTCC-ACTTGAAAT AGTTGA ATTTCAGATAGGAGAGC   ATTTATCTGATAATG  57 81
ONI09_RS06330 1213385 .. 1213397 +  -3.3  -3.38272   CTGCACAAGATCCTG                CGGAG ATA CTACG                TTATGAATGATACTC  48 3
ONI09_RS06335 NONE
ONI09_RS06340 1215496 .. 1215512 +  -3.7  -3.83378   TGTCAAAAAAACTTG              CTTTTAG ACA CTAACAG              TTATATATTTTAACA  55 173
        atpG NONE
ONI09_RS06350 1217909 .. 1217919 +    -4  -3.44222   CAAAGTTTTTCATCA                 CATT AGT AATG                 TTAGTTAATAATTTA  51 162
ONI09_RS06355 1218251 .. 1218265 +  -5.6  -3.17075   GAATAATTTTCATGA               GATGGG TCT CCCAGC               TTCGCTTAGACAAGC  55 78
ONI09_RS06360 1219501 .. 1219521 +  -9.8  -2.94925   GCGTAAAACTCGTCA            TTCCGCTA CTCAT TAGCGGAA            TCTATGCTGAGATAT  76 66
ONI09_RS06365 NONE
ONI09_RS06370 NONE
ONI09_RS06375 NONE
ONI09_RS06380 1224181 .. 1224196 +  -2.6  -2.87051   TCTTTTCAAGTTATG              GTTATA CTCT TATAGC               GTTTCATGGTAAAAA  42 132
ONI09_RS06385 1225329 .. 1225344 +  -4.8  -2.57344   ATAACATCGATGAAT              CATTAT TCAA ATAATG               GTTATGCAAGAAGTC  49 76
         rnc 1226537 .. 1226554 +  -2.7  -3.98842   TTCTGCCAAAATCCT             GGTTTAT TATC ATTAACC              TTTGTAAATGTTATA  52 398
ONI09_RS06410 1228551 .. 1228561 +  -6.8   -4.0075   AAGCGGATCACCTTT                 CACG ACC CGTG                 TTTACTTCATTCACT  69 219
ONI09_RS06425 NONE
ONI09_RS06430 1230674 .. 1230685 +    -3  -2.67705   TTAAATGAGTTGCTA                TAAC TATC GTTA                 TCATATAAATTATGC  43 33
         bfr NONE
ONI09_RS06440 1232148 .. 1232159 +  -5.8  -4.23674   TTATTGAAATAACGA                GAGC TTGA GCTC                 TTTCTATTCCTACCG  69 352
         tmk 1235265 .. 1235277 +  -4.9  -5.06816   CCATACCAAGAACAT                TCTTT ACC AAAGA                TTTTTCTTCACAACT  76 443
ONI09_RS06480 NONE
ONI09_RS06485 NONE
        mnmA 1243883 .. 1243897 +  -4.2  -3.17444   CTCATGTTTAATTTT               TTGCAC TAT GTGCAC               TCTATGTCTTTATCA  51 220
ONI09_RS06495 1245720 .. 1245737 +  -2.1  -3.99494   TGTAGCAACTTAAAA             GCA-TATA TTG TATAATGC             TTATTCTTAAGTTAA  52 42
         ppa 1246410 .. 1246438 + -11.8   -4.2123   CACATAGTAAACGAT        GTCATTCCAGTG CGTGA CACTGGGATGGC        TTTGTTGCATCGCTA 100 166
ONI09_RS06505 1247070 .. 1247086 +  -6.5  -2.77658   CCCAAAAGTCGTATC              GAGGGTT CGA ATCCCTC              TCCTTCCGTATACTG  58 1
ONI09_RS06510 NONE
ONI09_RS06515 NONE
ONI09_RS06520 1249790 .. 1249811 +  -3.1  -5.28778   ACTGGTGACTTCATT           TGGTTAA CTTTATCA TTAACCA            TTTTTTCTACCTCCT  76 138
        elbB 1251700 .. 1251711 +  -3.6  -5.61596   TAACGGTATGGCGTA                GGGC TTTA GCTC                 TTTTTTTATAAACGT  84 133
ONI09_RS06535 1252071 .. 1252089 +  -4.6  -4.11081   CTCAGGTGTAACATT             TAGTATAG GCG CTATTCTA             TTTATAATGTTCTTT  62 49
        ispH 1254841 .. 1254852 +    -3  -4.99035   CTTTACAAAACTTCA                TCTA CATC TAGA                 TTTTTATCTAAATAA  68 319
ONI09_RS06550 1255405 .. 1255418 +  -6.7  -3.15056   CCAGTGCCAAGCACT               GACCA TTTC TGGTC                TCTTAAATTGCAACT  61 133
        htpG 1257920 .. 1257932 +  -4.1  -3.21419   TAAGAGACTGAATAA                TTTGC TTG GCAAG                ATTTCTGTTTAATGC  51 1
ONI09_RS06565 1258418 .. 1258434 +  -2.3   -3.0634   TTACGCTGGATAATG              AAAATCT CAA AGATTTC              TGTTCAAATCAACTT  42 251
ONI09_RS06570 1262143 .. 1262155 +  -3.5  -2.96822   TAGTAGTTTACCATT                TAATA ATT TATTA                TAATTATGTTAATTA  45 47
        hemA 1263573 .. 1263586 +  -2.4   -4.5123   GAGCGTACATTACTA               TTGC CAGGCA GCAA                TTTATTTAATAAATT  58 210
ONI09_RS06600 1267888 .. 1267912 +  -2.9  -3.50588   GAACAAACATGTGAA          GATTCGATTGA TTT TTAATAGGATC          TATTTGATATGGCCT  47 8
         bcp NONE
        recF 1269951 .. 1269963 +  -7.7  -3.53012   ATATAAGCTGAAACG                CGCTT ACA AAGCG                TTTAAGACAGCAAAA  71 318
ONI09_RS06630 NONE
ONI09_RS06635 1273649 .. 1273659 +  -5.4  -3.75332   CTTGAATGACATCAT                 TTGC TGT GCAA                 TTTACCTTCAAAAAT  60 278
        carB NONE
ONI09_RS06650 NONE
ONI09_RS06655 NONE
ONI09_RS06660 NONE
ONI09_RS06665 1279416 .. 1279432 +  -2.2  -2.82505   ACACCCAGGGTTATA              GTGAAC GTCAA GTTCCC              CTTTAAATATCAACT  41 308
        purE NONE
        mutL 1288116 .. 1288128 +  -7.7  -3.53012   ACATAAGCCGAAACG                CGCTT ACA AAGCG                TTTAAGACAGCAAAA  71 284
ONI09_RS06725 1291581 .. 1291591 +  -2.6  -4.78512   TAAAAAAAAATTAAT                 TTTT ATT AAAA                 TTTTCATTTATTTTT  63 193
ONI09_RS06730 1292618 .. 1292643 +  -4.7  -3.70863   TATTATTCCAGCTAT         TGCTTCCATAG TCAT CAATAGAAGCA          TTTAAGTAATCTGTA  59 197
ONI09_RS06745 NONE
ONI09_RS06750 1295674 .. 1295685 +    -3  -3.05816   TAAGCAATATGAAGA                TTTG ATCT CAAA                 TTAACTGAAAGCTCG  45 10
ONI09_RS06755 NONE
ONI09_RS06760 1297524 .. 1297537 +  -6.7  -5.47399   CAGTGTCAGCTACTC               GGATG ACAT CATCC                TTTTTTTGGGATTCC  87 88
ONI09_RS06790 1307238 .. 1307248 +  -5.4  -2.62026   AGTACGCAAAAACTA                 TCTG TTG CAGA                 CTTGCTATTACAGTA  51 48
ONI09_RS06795 1306890 .. 1306906 -  -3.7  -4.19947   CAAAAGAACCAGAAA              GAACTGA AAC TGAGTTC              GAAGAAGAAATAATA  61 471
ONI09_RS06785 1303268 .. 1303280 -  -2.7  -3.43122   TCATAATAAATAAAT                CCAAT GTA ATTAG                TTATAATTATAGCTC  47 90
        nusA NONE
        infB NONE
ONI09_RS06770 NONE
        ubiA 1297844 .. 1297856 -  -7.7  -3.55444   TTTTTATGTTTTAAA                CGCTT TAT AAGCG                CGTTTCAGCTTATGT  71 260
ONI09_RS06740 1293260 .. 1293298 -    -3   -3.6608   ATGACGCCATGGAAA   GTGGATGAGACTACTG AGTTAAA CTGCTGTCACACCCAC   AGTTACTATACTCAG  50 91
ONI09_RS06735 1292328 .. 1292344 -  -6.6  -3.08201   CAACACTTGCAAAAT              CAACTC TAAAG GAGTTG              TTGAAGCTTTCTATT  60 258
ONI09_RS06710 NONE
        rpoZ NONE
ONI09_RS06700 1284066 .. 1284082 -  -2.3  -4.29953   AAATTATCAAAACAA              CATTAAT CTC ATTAGTG              CTATAGTTGATATAA  57 0
        mnhG NONE
ONI09_RS06690 NONE
ONI09_RS06685 NONE
ONI09_RS06680 1282421 .. 1282435 -  -2.1  -4.70887   TTATTAACAAACAAA               CTTAC AACGA GCAAG               TCTATAATTTTACTT  62 89
        rpoD NONE
ONI09_RS06670 1279071 .. 1279091 -    -2  -3.42768   ATTAAAACTTTAGAA           GATGAAATG ATTA CATTT-ATC            GATCAAAACCAAGAG  45 251
ONI09_RS06640 1273406 .. 1273421 -  -6.2  -2.91869   GAATAAATTACCATA              GTATCT GCAA AGATAC               CGTTAAGCCCACAAC  56 125
ONI09_RS06625 NONE
ONI09_RS06620 1270953 .. 1270973 - -11.9   -2.7782   CAATTGTGGAATAAT            GGTGCTCCT TTA AGAAGCACC            GTTTAGCTAATGCTT  84 58
ONI09_RS06615 1270402 .. 1270430 - -15.5  -3.01119   AGGTATTCATAGACA        CTGAAAGTGGTCA GCT TGACCACTTTCAA        GTAAAGAAAACTACG 100 63
ONI09_RS06595 NONE
        rimM 1264682 .. 1264697 -  -3.4  -2.59564   GTTTGATCTTACAAT              TATAAA TAGC TTTATA               TAAATATCAAAGTCT  43 44
         efp NONE
ONI09_RS06580 1263255 .. 1263272 -  -5.5    -3.182   ATATAAATTATCCAA             CAGTGCC AAGA GGAACTG              AGCGTTTCCGTATTA  55 133
ONI09_RS06555 1254907 .. 1254921 -  -2.8  -5.27399   CAAGACATCAAAAAA               TGCCAA TAC TCGACA               GAGATAGTAAAAGAC  72 391
ONI09_RS06540 NONE
ONI09_RS06525 NONE
ONI09_RS06475 1238988 .. 1238998 -    -4  -3.17392   GAGGTTTTAATGCAA                 GAAA CTA TTTC                 TTTATTCCAGAAAAT  49 19
        tilS NONE
        ftsH 1235572 .. 1235582 -  -2.6  -3.39521   GTGATGAAAATGCAA                 TATT ATT AATA                 TTTTAATACAATTTA  47 106
ONI09_RS06460 NONE
ONI09_RS06450 NONE
ONI09_RS06445 1231806 .. 1231823 -    -2  -4.24948   TTACTATAGGCAAAA             CCTCAA TAAAGC TTGAAG              CTTTCTGTACATAAA  54 54
ONI09_RS06420 NONE
ONI09_RS06415 1228492 .. 1228504 -  -7.7  -2.79796   TGTTAGCGGATGAGA                TACCG CGG CGGTA                TGACGGTTCGTGGCG  64 64
ONI09_RS06405 NONE
ONI09_RS06400 1226490 .. 1226501 -  -4.4  -3.28873   ATTGAGTAAAAACCA                GTGA ATGG TCAC                 GTTAAAACATATTTT  51 27
ONI09_RS06295 1204294 .. 1204306 -  -7.7  -3.55444   TTTTTATGTTTTAAA                CGCTT GAC AAGCG                AGATTCAGCCGCTTT  71 430
        hemF 1198514 .. 1198528 -  -8.6   -3.2963   AGCAGCTCTCTATAA               CCACTT AAC AAGTGG               TGGCATTGACATCAT  73 5
ONI09_RS06270 NONE
ONI09_RS06265 1197218 .. 1197232 -  -2.8  -3.87318   AACCACTAGACGAAA               GAGTCA ACT TGAATC               TAACTAGGTTATATC  51 84
ONI09_RS06260 NONE
ONI09_RS06255 NONE
ONI09_RS06250 1195994 .. 1196006 -  -2.7  -4.64846   TTATAAATTAGAAAA                TTAAC ATT GTCAA                TTATTTTATAAACTT  63 159
        rpsU NONE
        sucC NONE
        sucD 1193214 .. 1193231 -  -4.1  -4.04319   TGATAAATCCATAAA             GGTTAAC ATGG GTAAACC              TTTGCTAAAATGGCA  58 467
ONI09_RS06220 NONE
ONI09_RS06215 1191181 .. 1191194 -  -2.5  -3.50572   ACCTATCTCATACAA               TAATA AAGA TATTA                TTAATTAGCGGGACG  47 140
ONI09_RS06210 1190084 .. 1190104 -  -3.2  -4.20516   GTGTGATGCAACAAA           GCCCA-CTG GGAT CTGATGGGC            CAAAATCACAATGTT  57 186
ONI09_RS06165 1177245 .. 1177273 -  -9.6  -4.20516   GTGTGATGCAACAAA        GCCATCCCAGTG TCACG CACTGGCATGAC        ACCCTTTTGGATAGA  93 71
ONI09_RS06150 1174511 .. 1174523 -    -2  -3.92542   CCGAGCTCTAAAGAA                TTGT ACAAA ACAA                AAAAGGACAAGCCAA  52 254
ONI09_RS06125 1170061 .. 1170073 -  -3.3  -2.64773   CAACTTAATAAAATT                CCTGG ATC CCAGT                GGGCTTTGTTGCATC  43 73
ONI09_RS06120 1167381 .. 1167391 -  -2.4  -2.66316   TTCTTGATGAGATTA                 CGGC AAG GCTG                 GATTCCAGTGTCAAG  40 137
ONI09_RS06110 1166700 .. 1166757 -  -9.3  -2.87132   CTCCTTTTTGATATA GCTAAAATAAGTAAGGTTTACCTCGTG ACAG CGTGGGGCAAATCTTACTTACCTTAGC TATGCAGCTTGCATG  73 82
ONI09_RS06105 NONE
ONI09_RS06100 NONE
ONI09_RS06095 NONE
ONI09_RS06090 NONE
ONI09_RS06065 1162410 .. 1162438 -  -3.7  -4.14243   CACTCGACTTCAAAA        CCGTACGTGAGAC TTT GCGCCTCATACGG        CTTCTCTCCAATTTG  59 48
ONI09_RS06060 NONE
ONI09_RS06055 1160548 .. 1160578 - -10.4  -2.51057   CCTCAAACATAAAGG       TGTCATCCCAGTGC TTG ACACTGGGATGGCT       TTGTTGCATCGCTAC  75 501
        ubiH 1158998 .. 1159043 - -20.1  -2.82987   CTAAGAGCCAGCATA GCTGTGGATAAGCACGTTTAT ACAG ATAAAAGTACTTATCCACAGC TACATCAATTTTTCT 100 161
ONI09_RS06040 1158516 .. 1158528 -  -2.7  -3.73953   AGTATGCTTACGAAA                TGCAA CAA TTACA                GCCTCCTCTTCTAAA  51 155
ONI09_RS06020 1155739 .. 1155750 -  -2.2   -4.8143   TGAATAATCCAAAAA                GACT TGCA AGCC                 TTGTAAAGAAATACC  64 443
ONI09_RS06005 1152967 .. 1152980 -  -2.4   -3.6543   TAATGCTGGAAAACA               TGAG ACTCTG CTCA                GTAAACTCGATGATT  49 193
         def NONE
ONI09_RS05985 1149073 .. 1149085 -  -7.7  -3.55444   TTTTTATGTTTTAAA                CGCTT GAC AAGCG                AGATTCAGCTGCTTT  71 418
ONI09_RS05980 NONE
ONI09_RS05975 NONE
        nuoG NONE
        nuoH NONE
        hemB NONE
ONI09_RS05955 1143384 .. 1143403 -  -2.2  -4.69487   AAATATATAAATAAA            TAAGTACT ATTC AATACCTA             TTTTTTTAACAGTAT  62 12
ONI09_RS05950 NONE
        glyS NONE
        uvrC 1138285 .. 1138299 -  -4.4  -3.75437   AACCATGTTATTAAA               TATAAT AGA ATTATA               CTCAAGAAGTACAGA  57 310
ONI09_RS05930 1137396 .. 1137411 -  -7.6  -4.49756   CTTTAAATATTAAAA              CTTGAC TGAA GTCAAG               TAACACATAGATTAT  82 98
ONI09_RS05925 1137149 .. 1137172 -   -14  -3.24976   AAGTTTTTAAACAGA          TGACATGCAC TAAG GTGCATGTCA           CGAAGTATGAGGACG  95 41
ONI09_RS05920 NONE
ONI09_RS05915 NONE
        cysS 1134159 .. 1134182 -  -3.8  -3.25946   CGACCTGAAATAAAG          CATGGTATTG AACA CAAAACCTTG           ATGTATGGGTAAGAC  49 95
ONI09_RS05905 1133617 .. 1133632 -    -4  -4.40003   TGCCAGAAATAGAAA              TAGTGA TACT CCACTA               CATCATGCTGTTCTG  63 219
ONI09_RS05885 1127965 .. 1127975 -  -8.2  -4.18018   GGTTTCCATCCAAAA                 GGGC AGT GCCC                 CTATGATGTCATTCC  81 134
        ruvX 1127122 .. 1127143 -  -2.2  -5.82316   ACTATGTAAAAAAAA           GCATTACC GGAAAT GGCCATGC            TGATAAGGATCAGAT  83 203
ONI09_RS05820 1116425 .. 1116437 -    -2  -2.64695   TTCAAGATATAATAG                TTGT AAATA ACAA                GGTTGTAAAATTAAT  40 36
ONI09_RS05815 1115783 .. 1115798 -  -3.4  -4.41494   TACTCTCAATGAAAA              TATTTA TAAA TAAATA               TTTACTCTTCTTTTT  60 27
        ssrA NONE
ONI09_RS05805 1114869 .. 1114886 -  -6.3  -3.85698   TTTTTTGTTTATAAA             GATGAGC AGTT ACTCATC              ACGCAGTTGATCTAT  66 17
ONI09_RS05800 NONE
ONI09_RS05795 NONE
ONI09_RS05790 NONE
ONI09_RS05785 1113490 .. 1113515 -  -3.4  -3.20832   TTTCAAACTCAAAAT         GTTGTTTTTG CTGAAC CAAAAAAAAC          TTCATTTTTTGAGCT  47 110
ONI09_RS05780 1113159 .. 1113170 -  -4.4  -3.68506   TAACATCTACCTAAA                GTAG TAAG CTAC                 TGTATATTTTACAAA  55 5
ONI09_RS05775 1111010 .. 1111020 -    -4   -3.5936   TTGAAAGTGCGGAAA                 CTTA AAT TAAG                 GTATTACAAGATTGT  52 40
ONI09_RS05770 NONE
ONI09_RS05765 1110362 .. 1110384 -  -8.5  -3.46629   CTAAGAGAAGAGGAA           GGTGTTACA AGTTG CGTAACACC           TTTTCAAGAAAAGTG  75 41
ONI09_RS05760 NONE
        ispG 1108281 .. 1108296 -  -3.3  -2.61681   GGGTAAGGTCATAAT              TAACC GTGAAA GGTTA               CGTGTAATGCTTCTT  43 23
        secB NONE
        acnA 1097155 .. 1097174 -  -2.9  -4.07885   CAGGGCTGGCTAAAA            GAAGTCA ATGCAA TAACTTC             ACTAAATCAAAAAGA  53 32
        dprA 1085215 .. 1085227 -  -2.7  -5.03314   TGTACTGGTAAAAAA                CACAT TAT ATATG                GTGGTTCAGTCAGTT  68 261
        rsmA 1083674 .. 1083693 -  -3.6  -4.00348   CGCCAATTAATTAAA            TTGCAATA GGGC TTTTGCAA             AATAAGCATTCTACA  57 1
        guaB NONE
ONI09_RS05625 NONE
ONI09_RS05620 1081808 .. 1081820 -  -2.7  -4.53705   AATTTCTATATAAAA                GAATA CTT TACTC                TTTTTCTTTGCCCAG  60 20
ONI09_RS05615 1081085 .. 1081097 -  -6.3   -3.1577   ATGCAATAGTTAATA                GTAGA ATG TCTAC                GTTATTTGTTATAAA  61 367
        secD 1079356 .. 1079368 -  -6.3  -3.10409   TATTAAGCGACTTAA                GTAGT GGC ACTAC                TGGAGAAATTTTGCA  56 83
ONI09_RS05600 1077536 .. 1077567 -  -9.8  -3.92522   CTTTAACTTCATAAA      TAAACTTAAATCTT TATA AAAATTTAAGTTTA       AACTCAATATAAATA  87 53
ONI09_RS05595 NONE
ONI09_RS05590 1075707 .. 1075731 -  -4.3  -2.79175   AACTTTTACCCAAAG          CCTTCAATTCA GCA TGAATTTTAGG          AGCTCCATATCTACA  48 181
ONI09_RS05585 NONE
ONI09_RS05580 NONE
ONI09_RS05575 1074650 .. 1074665 -  -7.6  -2.79831   GCAATGGGTAGCAGA              GGTAGA AAGA TCTACC               TTACTGCAAAAGACA  64 506
ONI09_RS05535 1064951 .. 1064975 -  -5.7  -5.01811   GGAGTAAATCAAAAA          GATCCCGCT GCTTGTT AGCTGGATC          TAGAGATACCGCGAA  77 25
ONI09_RS05515 NONE
         rrf 1055736 .. 1055754 -  -3.9  -3.15292   AGAAACATTATGCAA             GCAAGTT ACAAA AACTTAC             AAAAAGATCTAACTA  49 498
        pstC NONE
        atpD NONE
ONI09_RS05480 1052173 .. 1052183 -  -4.6  -4.29153   GGATGACAAAAAAGA                 GCCC CCT GAGC                 AAAAATCTTATAGCC  64 75
ONI09_RS05455 1048648 .. 1048658 -  -6.8   -3.0353   CTTGCTACAAATAAG                 CCGT TAT ACGG                 GGTTAGTGCGCTGGA  60 330
ONI09_RS05435 1045566 .. 1045602 -  -8.7  -4.32177   TGAGTTTACAACAAA    TGGTGTCATCCCAGTGC TTG ACACTGGGATGACGTTA    TACGGTTCTTGGATG  89 79
ONI09_RS05425 NONE
        recO 1042649 .. 1042665 -  -9.4  -2.88544   GTCTATGCTGAGATA              CCGCGA ATGAA TCGCGG              TATGACGTGTTGCTC  73 90
ONI09_RS05355 1023247 .. 1023276 -  -5.1  -2.60763   TTCATATTGTATAAC       CATTACTCACTAA TCCC TTAGTGAATATCG        TAATATATAGGTCTG  50 159
ONI09_RS05350 NONE
ONI09_RS05345 NONE
ONI09_RS05340 1020993 .. 1021005 -  -3.3  -2.72807   ACAAAAGCGAAATAC                TGCCA ATT TGGCC                CATCATTTTATCTCT  43 47
        secF NONE
        yidC NONE
ONI09_RS05320 NONE
        nusB NONE
ONI09_RS05310 1016128 .. 1016149 -  -5.2  -2.50813   AGTGTACAACAAATG           GTGTCATGC AAGTA GC-TGACAC           TGGTTCACTTTATGA  49 387
        prfA 1011550 .. 1011570 -  -8.5  -2.87136   TTATTAATTAGTACA            TAAATACTA TAT TAGTATTTA            TCAAGAAATCAATAG  69 177
ONI09_RS05275 1010685 .. 1010710 -    -2  -3.30159   TCAAGGTCTGGAGAA         GATCTATA ATTATTGGTA TATAGATC          TTCTCATTTTCAGTT  44 42
ONI09_RS05265 1009162 .. 1009183 -  -2.3  -3.02881   TAGTTAATTAAATTA           GTGCCAAAA TTTG TTTTTACAC            AGGACTTAAGAATGA  42 137
ONI09_RS05260 NONE
ONI09_RS05255 NONE
ONI09_RS05250 1007639 .. 1007651 -  -2.7  -4.53705   AATTTCTATATAAAA                GAATA CTT TACTC                TTTTTCTTTGCCCAG  60 20
ONI09_RS05245 1006916 .. 1006928 -  -6.3   -3.1577   ATGCAATAGTTAATA                GTAGA ATG TCTAC                GTTATTTGTTATAAA  61 367
        rmuC 1005018 .. 1005030 -  -6.3  -3.37755   AGATATTTTTAAAGA                GAATC ACA GATTC                ATTATACATCCTTTT  62 420
ONI09_RS05225 1002637 .. 1002649 -  -4.8  -4.61199   AGTGCATAGAGAAAA                TGCC TGAAG GGCA                AATAAAAACTGAAGA  71 381
ONI09_RS05215 1000291 .. 1000304 -  -2.5    -5.252   TATTGTGATAAAAAA               TAAAA TTAA TTTTA                CATGTTATGAGAGGC  72 72
ONI09_RS05210 NONE
ONI09_RS05205 NONE
ONI09_RS05200 NONE
        folD  997059 ..  997079 -  -9.8  -2.94747   GTATCTCAGCATAGA            TTCCGCTA ACGAG TAGCGGAA            TGACGAATTTGTTGT  76 215
ONI09_RS05170 NONE
         fsa NONE
ONI09_RS05160  992409 ..  992427 - -10.4  -3.99985   GATATAGTCAAAGAA             TTCCATAC AAG GTATGGAA             TAACGCTTGATAAAG  88 520
ONI09_RS05150 NONE
ONI09_RS05145  986237 ..  986249 -  -3.3  -4.59511   AATATTTCTCAAAAA                CAGGC AAA GCTTG                CTCAAGAAATTTTTG  62 98
ONI09_RS05140 NONE
ONI09_RS05130 NONE
        hemC NONE
        murB  981722 ..  981732 -    -4  -4.93318   CATAAGCTATAAAAA                 CTAT CTA ATAG                 CTACCCAAAACCCTT  70 19
ONI09_RS05115 NONE
        rpsB NONE
         tsf NONE
        pyrH NONE
         frr  974176 ..  974188 -  -7.7  -2.53876   TTGGATTTCAATGGA                CACCT GGA AGGTG                TCAGCTACTTGCATG  63 237
        uppS NONE
ONI09_RS05060  972474 ..  972484 -    -4  -3.76379   GAAGATGTTAGCAAA                 TTTG TAT CAAA                 AGGTGTTCAAAACGA  54 354
ONI09_RS05045  971780 ..  971791 -    -3  -2.52742   ATTCTGCTATAATAT                CTAT ACAT ATAG                 TTTACCCTCTCAACA  42 110
ONI09_RS05040  970591 ..  970607 -  -2.3  -2.79202   AGACACATTTTAAAC              TTTTTTG TTG CAATAAA              ATAGAAACAAAAGTG  41 201
ONI09_RS05015  968329 ..  968342 -  -2.4  -3.94746   TCACACTTAATTAAA               CAGA CTGAAT TCTG                TAATTTTGGGATGTT  52 48
        mtaB NONE
ONI09_RS05000  963945 ..  963957 -  -6.3  -3.42685   AGAACATAGAGAAGA                TAAGC AAA GCTTA                TTGCATCAGAAATCA  59 162
        murC  957973 ..  957983 -  -2.6  -2.80935   ATCTTATTCATTACA                 TTAA ACC TTAA                 CTTCCGCAATAAGTG  42 15
         eno NONE
        obgE NONE
ONI09_RS04965  954998 ..  955024 -    -8  -3.59293   TCAAAGTGAAAGGAA         CCAAATCTCCAT ACG ATGGTGATTGGG         TTTACTGGGGGAATC  69 474
ONI09_RS04840 NONE
ONI09_RS04835 NONE
ONI09_RS04830 NONE
ONI09_RS04825 NONE
ONI09_RS04820 NONE
ONI09_RS04815  935027 ..  935051 -  -2.1  -2.64773   TAACGCAAGAAAATC          CCTCTCAAGAA CTT TTTTTGAGTAG          ATAATATCGTATCTC  40 39
ONI09_RS04810  934760 ..  934782 -  -9.2  -3.86524   ACAGGCTGTTATAAA           TTGTGCAGGA GGC TCTTGCACAA           ATGCCGCTGATTATT  81 36
ONI09_RS04800 NONE
ONI09_RS04795 NONE
ONI09_RS04790 NONE
ONI09_RS04785 NONE
ONI09_RS04780 NONE
ONI09_RS04775 NONE
ONI09_RS04770 NONE
ONI09_RS04765 NONE
ONI09_RS04760 NONE
ONI09_RS04755 NONE
ONI09_RS04750 NONE
ONI09_RS04745  925001 ..  925013 -  -4.9  -3.90112   CCTTTTTTAACTAAA                TACTA ATA TAGTA                TATGAAGATATAAAT  62 49
ONI09_RS04740 NONE
ONI09_RS04735 NONE
ONI09_RS04725  921398 ..  921408 -  -3.2  -4.37067   TAAATAGGATGAAAA                 GCTC CAT AAGC                 TCAAGTTAAGGAGAA  60 143
ONI09_RS04700 NONE
ONI09_RS04695 NONE
ONI09_RS04690  910183 ..  910194 -  -4.4  -4.24338   AAAAACAGGCTAAAA                TAGC AGTG GCTA                 AAAATTCACTTAAGG  63 118
ONI09_RS04675  906077 ..  906102 -  -3.3  -3.02829   TATATTTTTTGAATA         TCTGCTAATAA CTCT TTATTTGCTGA          TTCTCTACTGCTTAT  45 238
ONI09_RS04670 NONE
ONI09_RS04665 NONE
ONI09_RS04660  904979 ..  904991 -  -7.7  -3.55444   TTTTTATGTTTTAAA                CGCTT GAC AAGCG                AAATTCAGCTGCTTT  71 482
        coxB NONE
        ctaD NONE
ONI09_RS04645  900847 ..  900865 -  -2.5  -3.10654   TTAACAAAGTATATA            GTTGCTTT TATG AAAGCA-C             AATTTCTAAAGGTAG  43 152
        rnhA NONE
ONI09_RS04635  897022 ..  897043 - -10.9  -2.94144   TTTGGATGGAAACCA           GTGTCACGC ACTG GCATGACAC            CCATTTGTTCCTATA  81 279
ONI09_RS04620  893601 ..  893613 -  -2.7  -3.75629   GATTGCGAAGTTAAA                TGAAA TAG CTTCA                CTGTTATGATAAGGG  51 89
ONI09_RS04555 NONE
        gshB  876808 ..  876824 -    -3  -3.10464   GGAGCAACTTCAATA             GC-AGAG ATCA CTCTTGC              TAGGCGTTCTGCTAT  43 269
ONI09_RS04540  875582 ..  875592 -    -4  -3.63627   GCTGCAGATGTTAAA                 TAGT TGA ACTA                 ACGTTCCATTGTTTT  52 23
ONI09_RS04520  870805 ..  870815 -  -6.8  -3.15027   ATTTTCGATTAAAAG                 CTGG ATT CCAG                 TGTCAAGCACTGGAA  61 124
ONI09_RS04510  869495 ..  869511 -  -8.1   -3.1994   CAGATTATTTATTAA              TATAGCA TTA TGCTATA              GCTAAACTGACTTAC  70 222
ONI09_RS04505  868581 ..  868600 -  -5.1  -3.19921   ACATAACTGTACGAA            CATTGTA ATATGG TACAATG             TTAAGACGATGTCAT  54 333
ONI09_RS04500 NONE
ONI09_RS04495  866859 ..  866870 -  -4.4  -3.14211   AGGTTGTGTTACTAA                TGTG ATGA CACA                 AGCTATTTTATGGTA  50 61
ONI09_RS04490  863763 ..  863789 -  -8.8  -2.96274   TGTGGTAGAAGGATA         TTGCTCAAAGCT GAA AACGTTGAGCAA         GCAGAAAAATGTATC  70 335
ONI09_RS04455  856385 ..  856395 -  -5.4  -3.67188   ATGCACTGTAAAATA                 GCAA CCG TTGC                 AACCATGAATTTTCA  60 204
ONI09_RS04440 NONE
        ykgO NONE
ONI09_RS04430  853808 ..  853846 -  -8.1  -3.40689   GACAATTTGAAAAAC   CGTCATCCCGCTACG TGTTAGCGC CGCGGCGGTATGACG   TAGGGAGATCTCTAC  72 43
ONI09_RS04425  853094 ..  853118 -  -4.3  -2.79175   AACTTTTACCCAAAG          CCTTCAATTCA GCA TGAATTTTAGG          AGCTCCATATCTACA  48 181
ONI09_RS04420 NONE
ONI09_RS04415 NONE
ONI09_RS04410  852261 ..  852273 -  -6.3  -3.89215   GCTCAGAAAGCCAAA                GCTTT ATT AAAGC                AGCGTGAAATTGAGT  65 285
ONI09_RS04390 NONE
        ubiG  846079 ..  846094 -  -2.6  -4.70107   TATTAAAATAAGAAA              CAATCA GGCA TGATTA               TTGAAAGAACAATGG  62 471
        metG  844284 ..  844295 -  -2.2  -3.38162   AGTCAATAAATGTAA                TCCC ATCC AGGA                 GAAATAGTTTTTACA  45 41
ONI09_RS04355  841335 ..  841348 -  -4.5   -3.1855   CTTTCCAATATTTAA               CGTGCC CCT GGC-CG               GACTTGAACCAGCAT  51 14
ONI09_RS04350  840608 ..  840640 -  -2.2  -5.25735   GCAAAAAATTAAAAA     TAAGACGCCAACACGT AAT AC-TGTTGTCGT-TTA     ATCTGCACAGATTGA  70 101
ONI09_RS04345 NONE
        radC  839629 ..  839649 -  -7.6  -2.98823   GCCGCCGCAGATAGA            TCCCGCTA ACACG TAGCGGAA            TGACGATTGTCGGTA  66 70
ONI09_RS04325  834342 ..  834352 -  -5.4  -2.78526   TTCCATAAGATAGGA                 CTTC ACT GAAG                 AACTTGGTATATTGC  52 262
ONI09_RS04315  833408 ..  833425 -  -4.2  -4.35116   CATTCGAGATCAAAA             TTAAGC CAACCT GCTTAA              TACTAGCCTTATAAA  64 8
ONI09_RS04310 NONE
        holA NONE
ONI09_RS04300  830730 ..  830759 - -14.4   -4.2123   TAGCGATGCAACAAA       GCCATCCCAGTG TCTGGG CACTGGGATGAC        AGGAGAAGGCACTGG 100 162
        dapB NONE
        pstB NONE
ONI09_RS04285  828113 ..  828138 -  -3.3  -3.02829   TATATTTTTTGAATA         TCTGCTAATAA CTCT TTATTTGCTGA          TTCTCTACTGCTTAT  45 129
ONI09_RS04280 NONE
ONI09_RS04275 NONE
ONI09_RS04270 NONE
        mgtE  824586 ..  824602 -  -9.4  -3.10245   CTATGCTAAGAGATA              CCGCGA ATGAA TCGCGG              CATGACGGTTCGCGG  74 61
ONI09_RS04245  822512 ..  822532 -  -2.7  -2.90392   TACCTTGTAATCACA            CAAAAAA TCACGAG TTTTTTG            ATCAGCTTCCTTCCA  42 103
ONI09_RS04240  821204 ..  821224 -    -4  -2.71742   ATAAAATACAAGGGA            GCACAATT GCAGG AATTGAGC            CAACTTACGAAAATA  45 329
         dcd  819280 ..  819293 -  -2.5  -3.91087   TCAAACTAGAGCAAA               TAATA TAGC TATTA                ATACCCGCATATCAC  52 465
ONI09_RS04220 NONE
ONI09_RS04215 NONE
ONI09_RS04210  815082 ..  815098 -  -2.3  -2.84602   CTTACTTTATTAAAT              TTCAATT ACT AAATGAA              TTTATCACTTTCACT  41 10
ONI09_RS04205  814184 ..  814198 -  -2.1  -4.28432   AATCTTAAGCTAAAA               TCATG AAAAG CACGA               ATTTCAATACCTTAT  57 43
ONI09_RS04200 NONE
ONI09_RS04195  810252 ..  810281 -  -4.3   -4.2123   TAGCGATGCAACAAA       GCCATCCCAGT GTCACGCT ACTTGGATGAC        AGGAGAAGGAGGCTA  62 132
ONI09_RS04185  808695 ..  808720 -  -7.5  -3.08679   GTTTTCCATCCAAGA         CGGTGTCATGC CAGT GCGTGACACTG          GGATGGCTTTGTTGC  66 75
ONI09_RS04180  808193 ..  808206 -  -3.9  -3.92592   AGTGGCAATATTAAA               TAATG ACAG CATTA                AAGTTGCAATTGAAG  56 400
        rpsD NONE
ONI09_RS04165 NONE
        iscX  805235 ..  805249 -  -4.3  -4.19215   TAGATCCAAAAAATA               GCATA ATCAA TATGC               AAATTGTAATAGAAA  62 64
ONI09_RS04155 NONE
        rpmB NONE
        lipA  803281 ..  803291 -  -5.4   -4.2772   TTGAATTAACACAAA                 TGTC AAC GACA                 GGCCTTGAGCCTGTT  69 17
        ubiE NONE
ONI09_RS04135  801257 ..  801267 -  -6.8  -3.08776   AACTGTGCAAAAGGA                 CTGG ATA CCAG                 TGTCAGCTACTTGCA  59 152
ONI09_RS04125  797479 ..  797498 -  -5.8  -3.71793   TACATTAAGATAGAA            CAAGCTAT GAAT ATAACTTG             AATGAAAGAAACTAC  65 156
ONI09_RS04120  797117 ..  797163 - -11.2  -2.60211   ATCTGCTTAAAAATG TTCATTCACTATATTGCTATAA AAT CTATAGCAGTATAGTGAATAAG TGGGACTAGTTGAAG  83 77
        argS NONE
ONI09_RS04110 NONE
ONI09_RS04105  794452 ..  794495 -  -2.6   -3.9941   TTGTTCACAAGCAAA CTTTTCT-G-GATCCCAGTG TCTAGG CACTGGGATGACAAGAGAAG GTACTAGCCTGACAC  53 346
ONI09_RS04095  792034 ..  792054 - -11.2  -2.91383   AGCGGGATCTAGAGA            TACCGCGA ATGAA TCGCGGTA            TGACGGTTAATTATT  83 124
        aspS  788617 ..  788631 -  -2.8  -3.06312   AAATTTTTCATTCAA               TAACCT TCA AGGATA               ATTCACGTAAATGCT  43 3
ONI09_RS04075  786893 ..  786916 -  -2.5  -3.20382   TGGCATACCGAGCAA          GGATAGT GGAACAATAG ACTATCC           ATTGGTGAAAAAATA  45 394
        hemJ  784488 ..  784502 -  -2.8  -4.67011   AAGGTCAGTCAAAAA               GGTTTT ACA ACAACC               ATAATAACTATAACT  63 4
ONI09_RS04055 NONE
        miaB  782640 ..  782650 -  -2.6  -4.19953   CAGTGAATGGTAAAA                 TAAA TTA TTTA                 GAATCTTTAGAAATA  57 297
        ileS NONE
ONI09_RS04035  774926 ..  774940 -  -2.1  -3.98859   TTTAACTGAAAAAGA               GATCC AAAAA GAATC               AAGTGCTATAGTTAA  51 77
ONI09_RS04020  771272 ..  771289 -  -3.5   -3.7511   TTCTTTATAATATAA             TTGTAAA ATAT TCTACAA              GGAAGTCAATTACTT  52 35
ONI09_RS04015 NONE
ONI09_RS04010 NONE
ONI09_RS04005 NONE
ONI09_RS04000 NONE
ONI09_RS03995 NONE
ONI09_RS03990  767244 ..  767271 -  -2.8  -3.92809   AATAATGAAACAGAA        GGGATTTCAGTAG ATG CTG-TAAAATCCC        CAATATCTGGCTTAT  53 168
        gltX  762603 ..  762615 -  -7.7  -3.55444   TTTTTATGTTTTAAA                CGCTT GAC AAGCG                AAATTCAGCTGCTTT  71 391
        sdhA  760106 ..  760130 -  -2.8  -4.98857   ATTTAACGACAAAAA          CCGCTCTAAT TCAAC AACAGAGCAG          AATCAAGCTTCGAAG  66 203
ONI09_RS03930  752150 ..  752162 -  -6.3  -2.98479   CCAGTAAAGACTAGA                TTCCA AAC TGGAA                TGACAGCAGTCCTAC  59 54
ONI09_RS03920  749797 ..  749820 - -10.4  -4.10453   GAAATGCTTGCAAAA          GCCCTATATA AAAA TATACAGGGC           TATTAAGATTTTACA 100 28
ONI09_RS03915  748407 ..  748424 -  -7.1  -3.54029   TGGCATTAAGCATAA             GAGATAA ATTT TTATCTC              CAGATCAGGGAATGT  67 170
ONI09_RS03890 NONE
        tatC  742987 ..  743000 -  -6.7  -3.47494   ACTCAACCAGGACAA               GCTAG CAGC CTAGC                TTACTTTCTAGATCA  64 254
ONI09_RS03875 NONE
ONI09_RS03870 NONE
ONI09_RS03865  740596 ..  740608 -  -3.5  -2.76696   TTCTCTTTTAATAAT                TATTT TTT AAATA                GTTTGTTGGTTCATC  43 5
ONI09_RS03855  738322 ..  738332 -  -3.2  -4.40804   CAGCATGCCATAAAA                 GCAC TAT ATGC                 AGATAGAGCATGTGA  62 512
ONI09_RS03845  737192 ..  737204 -  -4.1  -2.50016   CTGGAGCATTAAGAG                CACTG TTA CAGTA                TTGTGTTGACGTTTC  45 357
ONI09_RS03815  729148 ..  729178 - -10.5  -3.51588   AATACAAAAACTGAA       GTTCGCGTCAAGT GCTTT ACTTGACACGTAC       GTCTCAGCTCAACAA  85 47
        secG NONE
ONI09_RS03800 NONE
ONI09_RS03795  725802 ..  725817 -  -4.7  -2.85446   TATAAACTTAGGAGA              GAGAG TAGGAT CTCTC               AGGGAGTTTGAGGGT  51 337
ONI09_RS03765  719504 ..  719514 -    -4  -3.61646   AAGTGTACAAATTAA                 GTTT TAC AAAC                 ATCATGACCAACTCA  52 181
ONI09_RS03760  718432 ..  718450 -  -2.5  -4.78477   AGACACAAAAAAGAA             CTATTTT TTTCT AAAACAG             ACCTGATGCACGGCT  63 7
ONI09_RS03690  705199 ..  705225 -  -4.4   -3.7795   GTAAAGTTGATGAAA         CTGCACGTGTTG AAT CAACAACTGCAA         CCATTACCAATAGGT  57 99
ONI09_RS03680 NONE
        grxD  703295 ..  703305 -  -2.6  -2.79677   CAAATGAAGAGAGGA                 TAAA AGA TTTA                 CTGAATCAGTCGTTG  42 409
ONI09_RS03665 NONE
ONI09_RS03660 NONE
ONI09_RS03655  699679 ..  699702 -  -9.6  -3.07816   TTTTCAGGTATCTAA          GTGGAGAAAG TCAC CTCTCCCCAC           TCGACTGCAGAACCG  77 88
ONI09_RS03645 NONE
ONI09_RS03635  696973 ..  696984 -  -4.4  -3.06762   AAGGAATTACATAGA                CCTT GCAG AAGG                 CAGCAGTATAGTATT  50 360
ONI09_RS03625 NONE
ONI09_RS03620 NONE
ONI09_RS03615 NONE
ONI09_RS03610  688382 ..  688395 -  -2.4  -3.14522   TCAACTGATATGCAA               GCTT TTATAC AAGC                ACTGCCCGATCGGTA  43 197
ONI09_RS03595 NONE
ONI09_RS03590  685568 ..  685603 -    -4  -2.96152   ACACCAAGTTAGAGA    GAAGCCGGATGTGGTGA AAG TCACAAG-TCCGGTTTC    GAAGTCGAGTGGGGA  46 356
ONI09_RS03565 NONE
ONI09_RS03560  679598 ..  679618 -  -5.5  -2.80654   TCAATAAAGTATAAG            CATTTGGAT GTT ATGCAAATG            TTGTTAAAATTTGGC  52 518
ONI09_RS03540 NONE
ONI09_RS03535  675437 ..  675449 -  -4.9  -4.08692   GAACTTTTGTCAAAA                CATAA TTC TTATG                AACCTTGGCGCAATC  63 327
ONI09_RS03485  659351 ..  659361 -  -2.6  -4.06781   AGGAAAAGGCATAAA                 TATA TGG TATA                 AGCTCATACAAACAG  53 226
ONI09_RS03395  642902 ..  642916 -  -2.9  -2.52464   TTCGTCCGCAATTTA               CAAAA AAAAA TTTTG               AGCAAATATAATCGA  41 52
ONI09_RS03390 NONE
ONI09_RS03385  641220 ..  641233 -  -2.4  -3.16093   TTAAAGTGAAAATTA               GCTA TTCCAT TAGC                TGCCAATGACCATTT  44 13
ONI09_RS03380 NONE
ONI09_RS03375  639290 ..  639312 -  -5.6   -2.9294   TAGATCACCTACATA           GAACTTATCA CCA CGAAAAGTTC           CTCTTGGCAGTAAAT  52 161
ONI09_RS03365 NONE
ONI09_RS03360 NONE
ONI09_RS03355 NONE
ONI09_RS03350  632888 ..  632909 -  -2.3  -2.76815   ATTCTCTTTAATAAC           TGCTTCTCTG ATT CAGAGAT-CA           CTGCTAAAGAACTAG  40 380
ONI09_RS03340 NONE
ONI09_RS03335  629947 ..  629961 -  -5.8  -3.40611   GTTACCTCAATAACA               TTTACA CCA TGTAAA               AATTCTTCAGCCATT  61 32
ONI09_RS03325 NONE
ONI09_RS03320 NONE
ONI09_RS03315 NONE
ONI09_RS03310 NONE
ONI09_RS03305  624737 ..  624756 -  -2.9  -4.69664   TATAGTAGCTAAAAA            TCACAAC CCTATT ATTGTGA             TTTATTGCGAGAGGT  63 213
ONI09_RS03295 NONE
ONI09_RS03290 NONE
ONI09_RS03285 NONE
ONI09_RS03280 NONE
ONI09_RS03275  621587 ..  621597 -  -2.6  -2.64274   ATTTGGGTAAAGGTA                 TTAA GAT TTAA                 TTTTTCCGCTTAGAA  41 15
ONI09_RS03270  620334 ..  620345 -  -4.4  -3.57908   TATCAAATAGCAGAA                CACT TATC AGTG                 AATATTAAAGTTCTG  55 326
ONI09_RS03215  609271 ..  609293 -    -2  -2.60161   CAGCAATTACAAGAC           CCACAGTATC CAC AATAATATGG           CGTTTTCTGCCCTTT  40 39
ONI09_RS03210  608895 ..  608912 -  -2.1  -2.77701   AGTTCACTAAGAGCA             TGTCTTCA AAC TGAAGA-A             TGAGCTAATTTGTGA  41 13
        mutL  605393 ..  605404 -  -2.2  -3.46509   TTGCAACAATATCAA                CAGA AACT CCTG                 CTTTAACCAAACCTT  45 509
ONI09_RS03185  603597 ..  603609 -  -6.3  -3.72756   GAAGAACAGATAGAA                GCATA GAG TATGC                CAATTCAAAGAGATT  63 348
ONI09_RS03150  599497 ..  599520 -  -9.6  -3.07816   TTTTCAGGTATCTAA          GTGGAGAAAG TCAC CTCTCCCCAC           TCGACTGCAGAACCG  77 88
ONI09_RS03140 NONE
ONI09_RS03130  596791 ..  596802 -  -4.4  -3.06762   AAGGAATTACATAGA                CCTT GCAG AAGG                 CAGCAGTATAGTATT  50 360
ONI09_RS03120  592292 ..  592313 -    -6  -3.05294   TGAAAGTCTTTAATA           TATTGCTA CTAATT TAGCAATA            TATACTGTTAAAAAC  57 131
ONI09_RS03115  589113 ..  589135 -  -2.8  -3.94853   TAATTTAATATTAAA           TATTACTAAG AAC CTAAATAATA           CAACCACTTTCAGCA  53 480
ONI09_RS03105 NONE
ONI09_RS03100 NONE
ONI09_RS03095  586367 ..  586378 -  -4.4  -4.24338   AAAAACAGGCTAAAA                TAGC AGTG GCTA                 AAAATTCACTTAAGG  63 103
ONI09_RS03045  573789 ..  573812 -  -9.6  -3.09987   TGAAGAGTTATCTAA          GTGAGGAAAG TCAC CTCTCCCCAC           TCGACTTCGAAACCG  77 12
        fabG NONE
ONI09_RS03015  568782 ..  568798 -  -5.1  -3.08312   AATTCATTGATTCAA              GAGTCAC GCA ATGACCC              ATACCTACATGAATT  52 462
ONI09_RS02830  547334 ..  547367 -  -3.9  -4.32857   TGCCTCAAACACAAA     GGTGTCATTCCAGTGC TTG ACACTGGAATC-CAGC     CCTTTTACGCAGTCC  62 315
ONI09_RS02805  542982 ..  542996 -  -5.7  -2.52529   TAGAACTACCAAGAG               CAGCA CTGAT TGCTG               ATAAGTTAGCAAAAC  51 485
        ltrA  538114 ..  538149 -  -6.2  -3.45571   CGCCGGAAAGAGTAA    GAGTTCAATGGACTAA GATA TTTACCCATCGAACCC     TCCTCTAGGAACCGT  61 164
ONI09_RS02790  537478 ..  537490 -  -4.8   -3.6878   ATATAGGCGAAAATA                CAGG CTTAC CCTG                TTCCTTCTATCATAC  57 240
ONI09_RS02785 NONE
ONI09_RS02780 NONE
        ltrA NONE
ONI09_RS02770  534788 ..  534798 -  -3.2  -4.32903   ATCAAATACGCAAAA                 CTGC ATT ACAG                 CAAGATGCGAAGGAG  59 239
ONI09_RS02760  531768 ..  531782 -  -7.1  -3.48593   TAGCGGCTGAGATAA               CGCGA ATAAA TCGCG               GGATGACGTGTTGCT  66 67
ONI09_RS02755 NONE
ONI09_RS02750 NONE
ONI09_RS02745  530285 ..  530315 -  -2.6  -2.84013   GAATTATAGCTAAAG       TGACTTAGGTTC TCTAATT GCACATAAGTCA       ACAATAATTTTCACA  42 318
ONI09_RS02720  525375 ..  525385 -  -5.4  -3.18737   CAATGATCATTAACA                 GAGT ATA ACTC                 GCATGAAATGCTTTC  55 195
ONI09_RS02705 NONE
        ribD  521320 ..  521331 -    -3  -3.54459   TTAATTTCTGGCAAA                TCAA CTTT TTGA                 TGAATGTATGGCTCT  50 506
        dapD  517605 ..  517622 -  -4.9  -3.85235   AATTGGTAAAAAAAG             TACTAGC ATGT GCTAATA              TTATGGCAAAGCATG  61 487
ONI09_RS02665  516147 ..  516169 - -12.2  -3.14976   CAATAACATAAATTA           CTTTAGCTAT GCT ATAGCTAAAG           TGGCTTAGGTTTACT  89 126
ONI09_RS02645  509522 ..  509538 -  -2.3  -2.61681   TGTTAATGCCATAAC              TCTACTC CTT AAATAGA              ACGTTAAAATTTCAT  40 89
ONI09_RS02640  509030 ..  509047 -  -7.7  -4.90296   AAAAGTTTATAAAAA             GGGACAG AAAC CTATCCC              TTTTTATTTTGTTGA  88 47
        ftsZ NONE
ONI09_RS02630  507200 ..  507219 -    -3  -2.85351   TGTGCTGAGATGACA            TCATTT-AG GAA CTGAAATGA            CAGGTATTACACATC  44 32
ONI09_RS02625 NONE
        ybeY NONE
        sdhB  505439 ..  505467 -  -6.2  -4.30014   TTCACGAATGGAAAA       GCGTTCAGGGTATT AAC AATACCCT-A-CGC       TTCGGAAGGTTTGCT  69 72
ONI09_RS02590  500736 ..  500754 -  -7.4   -4.1466   AGGTAAGGGTGAAAA             GGTGTGGT AAG AGCACACC             ATGGCAATGGCAACA  73 251
        nuoE NONE
         tgt  496288 ..  496304 -    -3  -3.61908   ACATGTGCAAAAAAC              GCTAAC TATGG ATTAGC              CAAGGAAGAAAGAGT  50 100
ONI09_RS02555  495477 ..  495488 -  -4.4  -3.16338   AGCTATACTAATACA                GGAA TGTT TTCC                 ATTTTTGCTGGTACA  51 407
ONI09_RS02540  493090 ..  493118 - -15.4   -4.2123   TAGCGATGCAACAAA        GCCATCCCAGTG TCAAG CACTGGGATGAC        ACCCTTTTTGGGTCC 100 129
ONI09_RS02525 NONE
        cydB  489420 ..  489430 -  -5.4  -5.06089   AAATTATAAAGAAAA                 CTGA ATG TCAG                 CGTCAAGCTACTTAT  79 161
         era  488516 ..  488528 -  -4.1  -3.14527   ATACCAATAAAGAAT                TAAGC ATT GCCTA                TGTACTCCTCCGGAC  50 12
ONI09_RS02510  487550 ..  487563 -  -5.3  -3.56973   AGATAGTATAAAAAT               GTTGA AAAT TCAAC                TTAAAGCAACCTTAT  59 163
ONI09_RS02505  485519 ..  485538 - -12.2  -3.56668   TAACAGACAAGAATA            CACCACAG TTAA CTGTGGTG             TGTACTGGCTGGTTA  91 38
ONI09_RS02500 NONE
ONI09_RS02495  484196 ..  484213 -  -5.5  -4.28375   GTAACATACGGAAAA             GGGGG GATTCGAA CCCCC              GACATATTTTCATAT  69 1
ONI09_RS02480  482943 ..  482959 -  -2.2  -2.82015   CTTAGAGGTAGTACA              CCTCAT CCACT ATGCGG              CAACGTGCATAGCTG  41 11
ONI09_RS02475 NONE
        lpdA NONE
ONI09_RS02465  479081 ..  479097 -  -2.3   -3.2703   AAACAAGTAAGGGAA              GAAAG AGATAGG CTTTC              ATCAGAAAATAGACT  43 311
        ribF NONE
        lspA NONE
ONI09_RS02425 NONE
ONI09_RS02420  469762 ..  469772 -    -4   -3.3581   AGCAGGTGTAAAAAT                 TACA GGT TGTA                 CTGTACATTATGTCA  50 189
ONI09_RS02410  468557 ..  468577 -  -2.6  -3.52918   CAATGTTGAAAGTAA            GCAGAAAA CATAT TTCTCTAC            CATGTATTTGATAGA  48 103
ONI09_RS02400 NONE
        smpB NONE
         lgt  464579 ..  464589 -  -3.2  -4.33258   ATTTTTAAAGATAAA                 CTGC ACA GCAA                 ATGGTGTCATGAAAG  60 476
ONI09_RS02385  462283 ..  462301 -  -3.2  -3.48824   GAATTAAAAAGGCAA             TTTATTGA AAT TCATTAAA             CGCTAGAGGGAAATA  48 328
ONI09_RS02380 NONE
ONI09_RS02375 NONE
ONI09_RS02370 NONE
ONI09_RS02365 NONE
         ssb NONE
        dapA  457492 ..  457507 -  -4.8  -3.23853   TTTTTCTAAGGAACA              TAACAT CAAA ATGTTA               AATGATCTTACTGCT  53 361
        gltX NONE
ONI09_RS02340  454069 ..  454085 -  -9.4  -2.87564   TTAGCGGCTGAGATA              CCGCGA ATGAA TCGCGG              TATGACGTAGATTGC  73 43
        dnaE NONE
ONI09_RS02330 NONE
        rpsR NONE
        rplI NONE
ONI09_RS02315 NONE
        purB NONE
ONI09_RS02305  446819 ..  446834 -  -3.3  -3.14211   ACTGGGTTTCACCAA              TAGCA CTGCTT TGCTA               AACATAGTTTAGTTC  45 42
        dapE  443790 ..  443805 -  -3.2  -3.86897   TGGAGTGGGGAGAAA              GAGCAC TAAT GTGTTC               TTAAATTCGGGGCTT  55 407
ONI09_RS02280 NONE
ONI09_RS02275  440685 ..  440699 -  -4.3  -4.23999   TTATAGCTAAAATAA               TTTGG ATTTA CCAAA               ATATATTTATAGTTA  62 115
ONI09_RS02260  436152 ..  436181 - -14.4  -4.20516   GTGTGATGCAACAAA       GCCATCCCAGTG TCTGGG CACTGGGATGAC        ATCCTTTCTAGTGAA 100 121
ONI09_RS02250  434726 ..  434740 -  -2.2  -4.04482   CCTCGTAAAAAAAAT               TAAAAT TCC ACTTTA               GCAGTCTAAGTAACA  52 195
ONI09_RS02245  433986 ..  433996 -  -4.6  -5.22006   GGATGACAAGAAAAA                 CCCC ACT GGGA                 TAACAAGACTGAGAT  79 44
ONI09_RS02240 NONE
ONI09_RS02235 NONE
        dnaN  430542 ..  430552 -  -2.6   -4.5787   TCAGCAAAAAAAAGA                 TATT ACG AATA                 TAGAATAGTTAATCG  62 505
ONI09_RS02200  425126 ..  425136 -    -4  -3.09635   ATTGTTACTATTTAA                 TCAT AAA ATGA                 TAAAAAAATATACAT  47 417
ONI09_RS02190 NONE
        hisS  422775 ..  422794 -  -2.8   -5.5112   GTTATGAATAAAAAA            CCAGAC TTAATATT GTCCGG             AGTAAATATTGGATC  77 524
ONI09_RS02140  410017 ..  410029 -  -3.5  -5.25906   ATAAATGAATAAAAA                TTTAT ACC ATAAA                TAAGATGAAAGTAGG  74 383
        trmB  406985 ..  406997 -  -7.7  -3.07344   CTAGCGGCTAAGAGA                TACCG TGA CGGTA                TGAAGGTTCGCGGTG  66 276
ONI09_RS02110  405625 ..  405635 -  -2.6  -3.57792   CCACTTATGTGTAAA                 TTAA TCG TTAA                 TGTTGTACACGTTCT  48 15
         der NONE
ONI09_RS02090 NONE
ONI09_RS02085  401166 ..  401182 -  -5.1  -4.50058   CAGTTATAAGCAAAA              TTTCTGG ATT CCAGACA              GGAATGACACCATTT  69 308
        mraY NONE
ONI09_RS02075  399325 ..  399342 -  -2.7  -3.82321   TATTTAATGAAAACA             TGCCTTT CAAA AAAGGTA              AGTGATTACTATCTA  51 45
ONI09_RS02055 NONE
        rodA  394911 ..  394927 -  -6.7  -3.43187   CATAAAAACTATTAA              GTAAAAT TTA ATTTTAC              TTTAGCATAGGTAAA  62 22
        purF  393459 ..  393476 -  -4.1  -2.90227   TCGGAATTAGTAAAG             GCCAAGA GAAA TTTTGGC              GGTTTAAGATTTTCT  48 62
ONI09_RS02005  387987 ..  388009 -  -4.2  -3.63515   TTGCACTTGCAAGAA          CCACTG-GT TGGGTT ACTCAGTGG           TATGAAATGATAAAT  55 108
ONI09_RS01970  380799 ..  380809 -  -5.4  -2.73124   TTTGATGTTTTAAAT                 GCTT TAT AAGC                 GCATTTCAGCTTATA  51 220
        apaG  378574 ..  378587 -  -2.4  -3.23708   CTTTGCTAAAAATCA               CAGA ATGCAG TCTG                GTTACAAATAAACTA  44 50
ONI09_RS01955  377217 ..  377235 -  -2.4  -5.41143   CAGGGCTCAAAAAAA             CACCAAAT GAA ATTGAGTG             GACTGCATATACCAT  73 331
ONI09_RS01945  375532 ..  375545 -  -2.5  -4.08221   TTCAATAGAATTAAA               TTTAT TAAT ATAAA                TAACAAATTACTATT  53 42
ONI09_RS01940  374192 ..  374210 -    -3  -5.66684   GAATCTAGAAAAAAA             GAACCTGG ATG CCAGTGTC             TGGGCACTGGCATGA  81 105
ONI09_RS01920  368488 ..  368499 -  -4.4  -3.55444   CTTGTATTTGGTAAA                GAAG ACAA CTTC                 TTTAATAAATTTGCA  55 501
ONI09_RS01905 NONE
ONI09_RS01900 NONE
ONI09_RS01895  364798 ..  364821 -  -2.6  -4.67982   GCTCATTTAACAAAA          CATATAACACT ATG AGT-TTACATG          CTTTCCTAACTTTTT  63 11
ONI09_RS01890 NONE
ONI09_RS01885 NONE
ONI09_RS01880 NONE
         mdh  362041 ..  362058 -  -2.7  -3.92522   TGTTAAGGTCAGAAA             TGAAAGC CGGT GCTTTTA              GTGGAGTAATGCACT  52 373
        rsfS NONE
ONI09_RS01850 NONE
        tyrS  358218 ..  358255 -  -8.6  -4.72631   ACCAACTTAATAAAA   TTCCTG-GATCCCAGTG TCAAG CACTGGGATGACAAGAA   GAGGGTACTTGGATA  93 307
ONI09_RS01830 NONE
ONI09_RS01825 NONE
        lepB  352446 ..  352463 -  -4.9   -2.7119   ATAGGTAGAAAAAGC             TTACACA ACCT TGTGCAA              TACCCTATTTAATCT  50 8
        ftsY  347921 ..  347932 -    -3  -3.15544   CCGTATTTGCAGGAA                TTGA AGGT TCAA                 GACCAATTTTAATGG  45 467
ONI09_RS01730  338128 ..  338156 -  -9.6   -4.2123   GAGCGATGCAACAAA        GCCATCCTAGTG TCACG CACTGGGATGAC        ATCATCCTTTTTTTG  86 419
ONI09_RS01720  337231 ..  337242 -    -3  -3.01119   ACTCATCTATATACA                CTAA GTTT TTAG                 GTTCTTTTGTCGCTA  45 461
ONI09_RS01710  336437 ..  336461 -  -4.3  -2.79175   AACTTTTACCCAAAG          CCTTCAATTCA GCA TGAATTTTAGG          AGCTCCATATCTACA  48 181
ONI09_RS01705 NONE
ONI09_RS01700 NONE
ONI09_RS01695  335524 ..  335535 -  -4.4  -4.14724   AAATAAAACACGAAA                GAAC AAAT GTTC                 TTGGAGAAAACCACG  62 366
        fabD  331622 ..  331640 -  -3.1  -4.46531   AATTAAAAAACCAAA             CGAAATG ACAGG CAGTTCG             TTGATTTCTTGCATT  62 101
ONI09_RS01645  327080 ..  327096 -  -3.7  -4.03413   AGTTGCTTATAGAAA              GGTTAAA GCG TTTTACC              CAAAAGCATTCATTA  58 317
        alaS  322439 ..  322459 - -11.2  -3.07344   TTAGCGGCTAAGAGA            TACCGCGA ATGAA TCGCGGTA            TGACGGTGTAGACGA  84 44
ONI09_RS01615 NONE
ONI09_RS01610  321980 ..  321996 -  -9.4  -2.87564   CTATGCTTTGAGATA              CCGCGA ATGAA TCGCGG              TATGACGGTTCGTGG  73 130
ONI09_RS01600 NONE
ONI09_RS01595 NONE
ONI09_RS01590  314493 ..  314503 -  -2.6  -3.46141   ATTATCAGCAAAAAT                 TTTA GCA TAAA                 TCCAACTCATTCAGT  47 32
ONI09_RS01585 NONE
ONI09_RS01580 NONE
ONI09_RS01575 NONE
ONI09_RS01570 NONE
        rsmD  303749 ..  303760 -  -2.2  -4.37092   ATTGTTGGTAGAAAA                GTAC TTGA GCAC                 GATCCTGAAAAGGTT  58 286
ONI09_RS01545  300663 ..  300679 -  -8.1  -2.59971   GGTAATAACTAATAT              TTGCAAA CTC TTTGCAA              TTCCAGTGCCTATAT  66 47
ONI09_RS01540 NONE
ONI09_RS01535 NONE
ONI09_RS01530  298511 ..  298525 -  -4.4  -3.00825   TTGATAAAACAGAAT               TTTATT ATC AATAAA               CATCAAAAGAGCATA  50 332
        uvrB  294417 ..  294430 -  -3.1  -4.65916   GGTAGTCCAAGAAAA               TCTCC GAAA AGAGA                TTCTTTACCACTTTC  64 302
ONI09_RS01490  288613 ..  288623 -  -6.8  -2.87931   CCCAGTGCCCAGACA                 CTGG GAT CCAG                 TCTTTTTTGTCATCT  58 55
ONI09_RS01485 NONE
ONI09_RS01480  285363 ..  285375 -  -3.5  -3.89448   GGCAAAAATAGATAA                TAAAT TCT ATTTA                CTTGATGTATATCGA  55 500
ONI09_RS01445 NONE
ONI09_RS01440  277484 ..  277498 -  -2.8   -3.5241   CATTGCTGAGAAACA               TGAGCA CAA TGCTGA               ATGTGTAAAGATACA  48 147
ONI09_RS01435  276530 ..  276570 -  -9.7  -3.28712   GCGCTGGCCTGACAA  CCGTCATCCCGCTGC TTGTTAGCGCC GCGGCGGTATGACGG  TCCGCTGCTTGTTAG  79 481
ONI09_RS01425  276029 ..  276043 -  -2.8  -5.27399   CAAGACATCAAAAAA               TGCCAA TAC TCGACA               GAGATAGTAAAAGAC  72 374
ONI09_RS01405 NONE
ONI09_RS01400 NONE
ONI09_RS01395  269588 ..  269602 -  -2.8  -3.59233   CAAGTATTAAATTAA               CAGGAT TTT ATCATG               AATTTATGTTAAAAG  48 58
ONI09_RS01390  269106 ..  269118 -  -4.9  -3.55563   AGCGTATTCCTTAAA                TCATA GAT TATGA                GTCTTTTTTACACTA  57 13
ONI09_RS01385  268745 ..  268759 -  -3.6  -3.06862   TATAATAACAATAAG               CTTAGA TAC TCTAAA               AAAAACTTTAAAATA  47 33
ONI09_RS01380  267754 ..  267764 -  -2.4  -2.78384   GCGTTGTCTATGATA                 GGGG TGC CGCC                 TGCTCCAACTTTTTG  41 300
ONI09_RS01340  260333 ..  260343 -    -4  -2.68419   CAATAATCCATACTA                 CTTT GGC AAAG                 CAACCGGGCTATCAC  45 12
ONI09_RS01335  259265 ..  259282 -  -4.9  -3.75517   ACGTGAGAAAATGAA             TGATCTT TTAA AAGACCA              ATTCCATTTACATGA  59 310
ONI09_RS01310  255036 ..  255048 -  -3.3  -2.64773   CAACTTAATAAAATT                CCTGG ATC CCAGT                GGGCTTTGTTGCATC  43 72
ONI09_RS01305  254475 ..  254486 -  -4.4  -5.51402   AGAGATGCAAAAAAA                GCTT GCAG AAGC                 TCAAGAAAAATATGT  84 384
ONI09_RS01285 NONE
ONI09_RS01280  251603 ..  251618 -  -7.6  -4.94902   GAAGCATCAGAAAAA              TCATGG CATG CCATGA               GGGAGTTTAATAATA  89 122
ONI09_RS01270  250533 ..  250548 -  -4.7  -4.57353   GCTTACCATATAAAA              GACTC TATGCT GAGTC               ATTGTTTTTCACTAC  69 14
ONI09_RS01250 NONE
ONI09_RS01245  247117 ..  247131 -  -4.3  -2.69042   ATATCATCAAAGTTA               GCTAT TCTCC ATAGC               GAAGTCTCTAGCTAG  47 8
        recA  244316 ..  244328 -  -4.9  -3.19921   ACATAATCTTATTAA                CAATA ACC TATTG                TTAACAATTTATCAT  54 189
ONI09_RS01230 NONE
ONI09_RS01225 NONE
ONI09_RS01220 NONE
ONI09_RS01215  239938 ..  239954 - -10.1  -2.88663   ATCTATGCTGAGATA              CCGCGAA TAA TCCGCGG              TATGACATAGGGAAA  76 82
        plsY  238816 ..  238830 -  -5.7  -3.78022   CTTAGAGCTATTAAA               TCGAG ATCTA CTCGA               GACAGATTTTTCTCT  60 486
ONI09_RS01190 NONE
ONI09_RS01185  232829 ..  232843 - -11.4   -3.8917   CTGGAATGACAAGAA               GAGGGC ACT GCCCTC               CTTGTATGTATTAGA  90 36
ONI09_RS01180  232575 ..  232588 -  -2.5  -4.08221   TTCAATAGAATTAAA               TTTAT TAAT ATAAA                TAACAAATTACTATT  53 118
ONI09_RS01175 NONE
ONI09_RS01170  230748 ..  230784 -   -16   -3.0894   TAAGTAGCGATGCAA    CAAAGCCATTCCAGCG TCACG CGCTGGAATGACATTG    TAGGGTGTTATCCGA 100 193
ONI09_RS01135  223156 ..  223168 -  -4.9  -3.15579   GCAACCTCTCAGGAA                CAATT AGA AATTG                GGTGTGATAGTATTA  53 112
ONI09_RS01120  219280 ..  219290 -    -4  -6.15828   TTTATTAAAAAAAAA                 GTAA AGC TTAC                 GTGGAAAATAGACGC  95 444
        purM  217349 ..  217369 -  -5.5   -3.3993   CAGCTAGTCAAAAAG            CTCAAGA TAACACC TCTTGAG            GTAGTAGTTAGAAAT  57 475
        trmD NONE
        rplS NONE
        pstA NONE
ONI09_RS01080  213633 ..  213645 -  -7.7  -3.47615   TATAAAGACATAAGA                TGCAC ATA GTGCA                AAAAATTAAACATGG  69 196
        terL  211528 ..  211582 -  -7.9  -3.03124   TCTTAGCCGCTAACA CGTAGCGGGATGACGAGCTTATCGTCA TGC TGCCGCGAA-C-CGTCATACCGCCACG AACTGTCATACCACC  66 159
ONI09_RS01060 NONE
ONI09_RS01055  208945 ..  208959 -  -2.8  -2.59686   GGATATACTAACGTA               CGAACA TTA TGTTTG               AGAGCAATCTCTACA  41 173
ONI09_RS01050  207346 ..  207360 -  -2.2  -4.23007   TATATAACGGTAAAA               CATTTT TTG AAAATA               TTAGCGGAAAAGCAA  56 343
ONI09_RS01035  203103 ..  203130 -  -4.8  -3.14132   GCGTGTTTGCACCAA        GGCGAA-CTGCAG CAG CAGCAGCTTCGCA        CCCTGCATGACCACC  52 258
ONI09_RS01025 NONE
ONI09_RS01020 NONE
ONI09_RS01015  198503 ..  198523 - -11.2  -3.21288   GAATCTATACTAAGA            TACCGCGA ATGAA TCGCGGTA            TGACGTAGGATTGCT  87 421
ONI09_RS01010  197697 ..  197707 -  -2.6  -4.28762   ACAAGTGCATGAAAA                 TTAA TTT TTAA                 AATTCTTCTTGATAA  58 15
ONI09_RS01005 NONE
ONI09_RS01000  196221 ..  196246 -  -3.3  -3.02829   TATATTTTTTGAATA         TCTGCTAATAA CTCT TTATTTGCTGA          TTCTCTACTGCTTAT  45 129
ONI09_RS00995 NONE
ONI09_RS00990 NONE
ONI09_RS00985 NONE
        polA NONE
ONI09_RS00975  191234 ..  191246 -  -4.7  -3.56643   TGTATACGTTCCAAA                CGGTC AAA GCCCG                GACTCTCAAGCATTT  57 478
        tldD NONE
ONI09_RS00945  187606 ..  187627 -  -5.1  -4.56607   GCATCAAGTACAAAA           GTGTCATCC AAGT AGCTGACAC            ATAACTGTACGAACA  69 7
ONI09_RS00940  186155 ..  186168 -  -5.3  -3.61894   AATGCTGGCTAACAA               TGTTG ATGT CAACA                CTATTGTCAAATTTA  58 128
        rpmF NONE
        plsX NONE
ONI09_RS00900  178389 ..  178399 -  -6.8  -4.04491   AATGTACAATAAGAA                 CTGG ATT CCAG                 ACTGGAATGACACCG  69 99
ONI09_RS00895  177221 ..  177242 -  -8.7  -2.66013   TATAGGAAGAAAAGG           GTGTCATGC CAGT GCGTGACAC            TGGGATGGCTTTGTT  69 77
ONI09_RS00885  175423 ..  175435 -  -2.7  -4.39571   TTTATAAACCTAAAA                CAACA TGC TATTG                CTATCAATATTGTTG  58 7
ONI09_RS00880  174208 ..  174228 - -12.7  -2.87344   CATTCGCGGTATAGA            TTCCGCTAA CTA TTAGCGGAA            TGACGAATTTGTTGT  86 236
ONI09_RS00870 NONE
ONI09_RS00865  171922 ..  171936 -  -4.2  -3.01712   TCTGCTTGCTGAATA               GGGGAT TTC ATCCAC               CTTTCAACATACAGT  50 500
ONI09_RS00860  171153 ..  171163 -  -3.2  -3.84271   GGATAATATGAATAA                 CGAT GAC ACCG                 TATATGTTATGACTC  55 482
ONI09_RS00850 NONE
        nuoK NONE
        nuoL NONE
ONI09_RS00835 NONE
ONI09_RS00830 NONE
ONI09_RS00825 NONE
        ccmE  161969 ..  161991 - -10.6   -5.9218   CATATAAGAAAAAAA           GTAATAGCCC AGT GGGCTGTTAC           TCTCTCTACATATCG 100 57
ONI09_RS00795 NONE
        nuoF  157251 ..  157263 -  -3.4  -4.95484   GACTACGAAACAAAA                TTGC GTCAA GCAA                GAGACTTACTTGTCC  70 242
        mnmE  152525 ..  152535 -  -2.6  -2.60423   ATTTTAAGCAATCTA                 TAAA AGC TTTA                 CTTGCCCACGCAAAA  41 23
ONI09_RS00755  152373 ..  152388 -  -2.6  -4.64144   AATAAGCTCTAAAAA              TCAGCTA GCA TAGC-GA              GATGCTGTGCGGACG  60 35
ONI09_RS00750  150857 ..  150869 -  -7.7  -3.55444   TTTTTATGTTTTAAA                CGCTT GAC AAGCG                AGATTAAGCTGCTTT  71 369
ONI09_RS00740 NONE
        gyrA NONE
        petA  145724 ..  145736 -  -4.9  -3.90352   ATTAAAAATACACAA                TAAAC ACA GTTTA                TCTATACAAAAAAAG  61 131
ONI09_RS00720  141076 ..  141086 -    -4  -4.15396   CCTCAAAGGAAATAA                 TAGA TTC TCTA                 ACAAATGACTCTAAT  58 500
ONI09_RS00690 NONE
ONI09_RS00685  134451 ..  134463 -  -6.3  -2.66257   GGAAAAACGAAAAGC                CTACT TTA AGTAG                TATAGAAAGTGTTCA  57 67
        gshA  130698 ..  130719 -  -3.9   -3.7104   ATGCAGATGTAATAA           GTT-ATGTTA GCT TAACATCAAC           GATCCTATTTCTGTT  54 420
         ndk  127530 ..  127542 -  -7.7  -3.55444   TTTTTATGTTTTAAA                CGCTT GAC AAGCG                AGATTCAGCCGCTTT  71 429
        recR NONE
ONI09_RS00630  124603 ..  124623 - -11.3  -4.73297   TAAGCAAGAAAGAAA            GAGAAAAAC TTG GTTTTTCTC            CTAAACAGCAAAATA 100 412
ONI09_RS00610  120814 ..  120825 -  -4.4  -3.02223   AAATAAAAAATGAAG                CTGA AAAA TCAG                 GTAGCGAGTTTTCTG  50 246
ONI09_RS00570  110899 ..  110919 - -11.2  -3.26444   GGCGCTAACAAGAGA            TCCCGCTA ACACG TAGCGGGA            TGACGAATATATCGC  87 224
ONI09_RS00565  109531 ..  109545 -  -4.4  -3.15784   CCTATAAGAAATAAT               TTAAAA AAG TTTTAA               TCTAATCGTTTTTGC  51 22
ONI09_RS00560 NONE
ONI09_RS00555 NONE
ONI09_RS00550 NONE
ONI09_RS00545  108119 ..  108129 -  -3.2   -3.6914   AATTTCAATAGACAA                 GCAC TAC ATGC                 TTATACACTGGGCTT  52 146
ONI09_RS00520  103103 ..  103113 -  -3.2  -3.18832   GAATGTCACAATACA                 CAAG TTT CTCG                 TCCTGATTTTTGGGT  47 168
ONI09_RS00505  101251 ..  101263 -  -6.3  -2.85999   GCAGTTGAGATTATA                TTTCG ACA CGAAA                AAGATCAGCAAACGT  55 267
ONI09_RS00435   90383 ..   90403 - -11.2  -3.04853   TAAAGTGAAATGAGA            TCCCGCTA ACACG TAGCGGGA            TGACGAGAAAGGGGC  84 233
ONI09_RS00415   87802 ..   87816 -  -5.8  -4.06384   CTCCAAGACTATAAA               TAAACT GAG AGTTTA               GACTAACCTTGTAAT  67 309
ONI09_RS00405 NONE
ONI09_RS00400 NONE
ONI09_RS00395   85579 ..   85598 -  -6.4  -2.80479   TTGAAGCAAAAGTGA            TGTCATGC CAGT GCGTGACA             CTGGGATGGCTTTGT  58 78
        rpmG NONE
ONI09_RS00360   77580 ..   77594 -  -5.8   -3.3458   CATGAAAGAACTGAA               TGATTT TAA AAATCA               AAAATATATCGTCAC  61 407
ONI09_RS00350   76291 ..   76314 -  -2.6  -2.53271   TTATGTGCAGAAGAC          GCAAAAT-ATT TTG AATCATTTCGC          TGCGTAACTGCTAAA  41 17
        ubiB   74692 ..   74710 - -10.3  -2.74231   ACATTGAAACAAGAG             GCCAGTG TCACG CACTGGC             ATGACACCCATTTGT  78 194
ONI09_RS00310   68105 ..   68131 -  -2.2  -5.34055   ACAAACAGCAAAAAA         GCCATAGCTGTA AAA TACAGTAATGGT         GTCTACTCTGATCAC  73 466
        rplM NONE
        rpsI   63323 ..   63355 -  -6.6  -2.98986   AGAGGATATCATACA      TTTTTGCAAATATT TGTAT AATACTTACAAAAA      AACACCCCTATAAAA  59 44
ONI09_RS00275   62765 ..   62783 -  -7.4  -3.74416   AAATTAGGAATAGAA             TGCCACGC AGG ACATGGCA             TAACTTATAAACACG  69 158
ONI09_RS00265   61657 ..   61682 -  -3.3  -3.02829   TATATTTTTTGAATA         TCTGCTAATAA CTCT TTATTTGCTGA          TTCTCTACTGCTTAT  45 129
ONI09_RS00260 NONE
ONI09_RS00255 NONE
ONI09_RS00250   60763 ..   60776 -  -2.4  -3.55444   TTTCCATCTTCTAAA               CTGT TCATGC ACAG                CCTTCCACGGCGGAA  47 277
        ltrA   47817 ..   47840 -  -9.6  -3.07816   CTTTTAGTTATCTAA          GTGAGGAAAG TCAC CTCTCCCCAC           TCGACTTCGAAACCG  77 12
ONI09_RS00195   45680 ..   45708 -  -3.7  -4.14243   CACTCGACTTCAAAA        CCGTACGTGAGAC TTT GCGCCTCATACGG        CTTCTCTCCAATTTG  59 48
ONI09_RS00190   45273 ..   45288 -  -3.2  -4.84529   TTATAAAGTGAAAAA              TGGACT TTTC AGACCA               CTGCCGAGCTAAAAA  68 61
ONI09_RS00185 NONE
ONI09_RS00180 NONE
        dnaJ   42713 ..   42726 -  -3.9  -3.61398   TCTGTTGGCTAATAA               TAACA CTAT TGTTA                AGTTTTCCATTAATA  52 111
ONI09_RS00170   40947 ..   40966 -  -5.8  -3.00213   ATAAATAACACCAGA            TGAACGAA TAGC TTCATTCA             TTTCATACCTGTTCT  57 28
ONI09_RS00165   39683 ..   39693 -    -4   -3.8377   AAGGCTCATATCAAA                 TCTA TAA TAGA                 TCTACTTTCAAAAAT  55 33
ONI09_RS00145   34440 ..   34452 -  -7.7  -2.91383   AGCGGGATCTAGAGA                TACCG CGG CGGTA                TAACGTAGGGAAACC  64 286
ONI09_RS00130   30098 ..   30114 -  -2.3  -3.55447   TCATTGATTACATAA              TGCAA CACAAAC TTGCA              TTCTCCCTTGAAATA  47 1
        dusB   28847 ..   28858 -  -5.8  -3.54012   AAAGTACTTACAGAA                GCAG CATT CTGC                 GGGAAGAGTGATCCT  61 269
ONI09_RS00060   12242 ..   12263 -    -3  -4.46212   TTGGTGAGCATAAAA           GTATAGCT AATGCG AGCTTTAC            GTCATACCGTCACGG  62 80
        prmC   11153 ..   11175 - -10.7   -3.2234   CATAGTAAATATAGA           TCCAAGTAG TCACG CTACTTGGA           TGACTAGCTAGAGGG  86 88
