locus-tag class description WwMa_RS00005 PF00308 Bacterial dnaA protein WwMa_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix WwMa_RS00005 PF11638 DnaA N-terminal domain WwMa_RS00010 PF07549 SecD/SecF GG Motif WwMa_RS00010 PF02355 Protein export membrane protein WwMa_RS00020 PF02096 60Kd inner membrane protein WwMa_RS00020 PF14849 YidC periplasmic domain WwMa_RS00025 PF00885 6,7-dimethyl-8-ribityllumazine synthase WwMa_RS00030 PF01029 NusB family WwMa_RS00040 PF00692 dUTPase WwMa_RS00070 PF01648 4'-phosphopantetheinyl transferase superfamily WwMa_RS00075 PF03129 Anticodon binding domain WwMa_RS00075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WwMa_RS00090 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WwMa_RS00090 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WwMa_RS00090 PF13288 DXP reductoisomerase C-terminal domain WwMa_RS00100 PF00005 ABC transporter WwMa_RS00105 PF01113 Dihydrodipicolinate reductase, N-terminus WwMa_RS00105 PF05173 Dihydrodipicolinate reductase, C-terminus WwMa_RS00130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WwMa_RS00145 PF08264 Anticodon-binding domain of tRNA WwMa_RS00145 PF00133 tRNA synthetases class I (I, L, M and V) WwMa_RS00155 PF00115 Cytochrome C and Quinol oxidase polypeptide I WwMa_RS00170 PF07992 Pyridine nucleotide-disulphide oxidoreductase WwMa_RS00170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WwMa_RS00175 PF02899 Phage integrase, N-terminal SAM-like domain WwMa_RS00175 PF00589 Phage integrase family WwMa_RS00180 PF02934 GatB/GatE catalytic domain WwMa_RS00180 PF02637 GatB domain WwMa_RS00185 PF00676 Dehydrogenase E1 component WwMa_RS00190 PF03653 Uncharacterised protein family (UPF0093) WwMa_RS00195 PF00529 HlyD membrane-fusion protein of T1SS WwMa_RS00195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WwMa_RS00200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WwMa_RS00200 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WwMa_RS00205 PF00115 Cytochrome C and Quinol oxidase polypeptide I WwMa_RS00210 PF01040 UbiA prenyltransferase family WwMa_RS00215 PF00075 RNase H WwMa_RS00225 PF09190 DALR domain WwMa_RS00225 PF01406 tRNA synthetases class I (C) catalytic domain WwMa_RS00230 PF06055 Exopolysaccharide synthesis, ExoD WwMa_RS00235 PF01348 Type II intron maturase WwMa_RS00235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS00245 PF02416 mttA/Hcf106 family WwMa_RS00250 PF00005 ABC transporter WwMa_RS00265 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded WwMa_RS00275 PF01926 50S ribosome-binding GTPase WwMa_RS00275 PF06071 Protein of unknown function (DUF933) WwMa_RS00310 PF09297 NADH pyrophosphatase zinc ribbon domain WwMa_RS00310 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain WwMa_RS00310 PF00293 NUDIX domain WwMa_RS00320 PF03330 Lytic transglycolase WwMa_RS00325 PF01225 Mur ligase family, catalytic domain WwMa_RS00325 PF02875 Mur ligase family, glutamate ligase domain WwMa_RS00325 PF08245 Mur ligase middle domain WwMa_RS00330 PF07690 Major Facilitator Superfamily WwMa_RS00335 PF01494 FAD binding domain WwMa_RS00350 PF00709 Adenylosuccinate synthetase WwMa_RS00355 PF01548 Transposase WwMa_RS00355 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS00440 PF01467 Cytidylyltransferase-like WwMa_RS00455 PF01255 Putative undecaprenyl diphosphate synthase WwMa_RS00465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WwMa_RS00465 PF00364 Biotin-requiring enzyme WwMa_RS00465 PF02817 e3 binding domain WwMa_RS00490 PF00004 ATPase family associated with various cellular activities (AAA) WwMa_RS00490 PF07724 AAA domain (Cdc48 subfamily) WwMa_RS00490 PF17871 AAA lid domain WwMa_RS00490 PF02861 Clp amino terminal domain, pathogenicity island component WwMa_RS00490 PF10431 C-terminal, D2-small domain, of ClpB protein WwMa_RS00495 PF05088 Bacterial NAD-glutamate dehydrogenase WwMa_RS00505 PF00072 Response regulator receiver domain WwMa_RS00505 PF00990 Diguanylate cyclase, GGDEF domain WwMa_RS00510 PF02565 Recombination protein O C terminal WwMa_RS00510 PF11967 Recombination protein O N terminal WwMa_RS00525 PF00268 Ribonucleotide reductase, small chain WwMa_RS00545 PF01571 Aminomethyltransferase folate-binding domain WwMa_RS00550 PF00166 Chaperonin 10 Kd subunit WwMa_RS00555 PF00118 TCP-1/cpn60 chaperonin family WwMa_RS00565 PF01235 Sodium:alanine symporter family WwMa_RS00575 PF02545 Maf-like protein WwMa_RS00580 PF01176 Translation initiation factor 1A / IF-1 WwMa_RS00590 PF01548 Transposase WwMa_RS00590 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS00640 PF07992 Pyridine nucleotide-disulphide oxidoreductase WwMa_RS00645 PF00578 AhpC/TSA family WwMa_RS00645 PF10417 C-terminal domain of 1-Cys peroxiredoxin WwMa_RS00660 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal WwMa_RS00660 PF01578 Cytochrome C assembly protein WwMa_RS00670 PF04002 RadC-like JAB domain WwMa_RS00675 PF07943 Penicillin-binding protein 5, C-terminal domain WwMa_RS00675 PF00768 D-alanyl-D-alanine carboxypeptidase WwMa_RS00680 PF02646 RmuC family WwMa_RS00700 PF02810 SEC-C motif WwMa_RS00700 PF07517 SecA DEAD-like domain WwMa_RS00700 PF01043 SecA preprotein cross-linking domain WwMa_RS00700 PF07516 SecA Wing and Scaffold domain WwMa_RS00705 PF13358 DDE superfamily endonuclease WwMa_RS00715 PF17782 DprA winged helix domain WwMa_RS00715 PF02481 DNA recombination-mediator protein A WwMa_RS00720 PF00037 4Fe-4S binding domain WwMa_RS00720 PF11953 Domain of unknown function (DUF3470) WwMa_RS00740 PF01820 D-ala D-ala ligase N-terminus WwMa_RS00740 PF07478 D-ala D-ala ligase C-terminus WwMa_RS00765 PF00533 BRCA1 C Terminus (BRCT) domain WwMa_RS00765 PF03120 NAD-dependent DNA ligase OB-fold domain WwMa_RS00765 PF12826 Helix-hairpin-helix motif WwMa_RS00765 PF01653 NAD-dependent DNA ligase adenylation domain WwMa_RS00785 PF04002 RadC-like JAB domain WwMa_RS00805 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain WwMa_RS00805 PF18413 Neuraminidase-like domain WwMa_RS00805 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain WwMa_RS00805 PF18413 Neuraminidase-like domain WwMa_RS00820 PF05785 Rho-activating domain of cytotoxic necrotizing factor WwMa_RS00820 PF18807 Tripartite Tc toxins repeat WwMa_RS00825 PF12255 Insecticide toxin TcdB middle/C-terminal region WwMa_RS00825 PF12256 Insecticide toxin TcdB middle/N-terminal region WwMa_RS00825 PF03534 Salmonella virulence plasmid 65kDa B protein WwMa_RS00830 PF01734 Patatin-like phospholipase WwMa_RS00875 PF04984 Phage tail sheath protein subtilisin-like domain WwMa_RS00875 PF17482 Phage tail sheath C-terminal domain WwMa_RS00935 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS00935 PF01548 Transposase WwMa_RS00945 PF03448 MgtE intracellular N domain WwMa_RS00945 PF00571 CBS domain WwMa_RS00945 PF01769 Divalent cation transporter WwMa_RS00965 PF01479 S4 domain WwMa_RS00965 PF00849 RNA pseudouridylate synthase WwMa_RS00970 PF00083 Sugar (and other) transporter WwMa_RS00970 PF08946 Osmosensory transporter coiled coil WwMa_RS00975 PF02938 GAD domain WwMa_RS00975 PF00152 tRNA synthetases class II (D, K and N) WwMa_RS00975 PF01336 OB-fold nucleic acid binding domain WwMa_RS00985 PF01624 MutS domain I WwMa_RS00985 PF05188 MutS domain II WwMa_RS00985 PF05192 MutS domain III WwMa_RS00985 PF00488 MutS domain V WwMa_RS00985 PF05190 MutS family domain IV WwMa_RS00995 PF00902 Sec-independent protein translocase protein (TatC) WwMa_RS01000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WwMa_RS01000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WwMa_RS01020 PF01743 Poly A polymerase head domain WwMa_RS01020 PF12627 Probable RNA and SrmB- binding site of polymerase A WwMa_RS01020 PF13735 tRNA nucleotidyltransferase domain 2 putative WwMa_RS01025 PF00679 Elongation factor G C-terminus WwMa_RS01025 PF00009 Elongation factor Tu GTP binding domain WwMa_RS01025 PF03144 Elongation factor Tu domain 2 WwMa_RS01030 PF00749 tRNA synthetases class I (E and Q), catalytic domain WwMa_RS01045 PF00950 ABC 3 transport family WwMa_RS01055 PF00288 GHMP kinases N terminal domain WwMa_RS01055 PF08544 GHMP kinases C terminal WwMa_RS01060 PF00580 UvrD/REP helicase N-terminal domain WwMa_RS01060 PF12705 PD-(D/E)XK nuclease superfamily WwMa_RS01060 PF13361 UvrD-like helicase C-terminal domain WwMa_RS01065 PF03918 Cytochrome C biogenesis protein WwMa_RS01075 PF00111 2Fe-2S iron-sulfur cluster binding domain WwMa_RS01090 PF10410 DnaB-helicase binding domain of primase WwMa_RS01090 PF01807 CHC2 zinc finger WwMa_RS01090 PF08278 DNA primase DnaG DnaB-binding WwMa_RS01090 PF08275 DNA primase catalytic core, N-terminal domain WwMa_RS01090 PF13662 Toprim domain WwMa_RS01095 PF08241 Methyltransferase domain WwMa_RS01105 PF00814 Glycoprotease family WwMa_RS01115 PF00596 Class II Aldolase and Adducin N-terminal domain WwMa_RS01125 PF01258 Prokaryotic dksA/traR C4-type zinc finger WwMa_RS01130 PF01548 Transposase WwMa_RS01130 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS01140 PF00226 DnaJ domain WwMa_RS01140 PF01556 DnaJ C terminal domain WwMa_RS01140 PF00684 DnaJ central domain WwMa_RS01145 PF04551 GcpE protein WwMa_RS01160 PF01580 FtsK/SpoIIIE family WwMa_RS01160 PF09397 Ftsk gamma domain WwMa_RS01160 PF17854 FtsK alpha domain WwMa_RS01160 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WwMa_RS01165 PF02325 YGGT family WwMa_RS01190 PF01018 GTP1/OBG WwMa_RS01190 PF01926 50S ribosome-binding GTPase WwMa_RS01195 PF00113 Enolase, C-terminal TIM barrel domain WwMa_RS01195 PF03952 Enolase, N-terminal domain WwMa_RS01205 PF01225 Mur ligase family, catalytic domain WwMa_RS01205 PF02875 Mur ligase family, glutamate ligase domain WwMa_RS01205 PF08245 Mur ligase middle domain WwMa_RS01210 PF02104 SURF1 family WwMa_RS01215 PF00210 Ferritin-like domain WwMa_RS01245 PF10415 Fumarase C C-terminus WwMa_RS01245 PF00206 Lyase WwMa_RS01260 PF00586 AIR synthase related protein, N-terminal domain WwMa_RS01260 PF02769 AIR synthase related protein, C-terminal domain WwMa_RS01260 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WwMa_RS01275 PF00684 DnaJ central domain WwMa_RS01275 PF00226 DnaJ domain WwMa_RS01275 PF01556 DnaJ C terminal domain WwMa_RS01280 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WwMa_RS01280 PF12706 Beta-lactamase superfamily domain WwMa_RS01280 PF17770 Ribonuclease J C-terminal domain WwMa_RS01285 PF07676 WD40-like Beta Propeller Repeat WwMa_RS01290 PF02686 Glu-tRNAGln amidotransferase C subunit WwMa_RS01295 PF14572 Phosphoribosyl synthetase-associated domain WwMa_RS01295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WwMa_RS01300 PF02779 Transketolase, pyrimidine binding domain WwMa_RS01300 PF02780 Transketolase, C-terminal domain WwMa_RS01300 PF00456 Transketolase, thiamine diphosphate binding domain WwMa_RS01305 PF00163 Ribosomal protein S4/S9 N-terminal domain WwMa_RS01305 PF01479 S4 domain WwMa_RS01315 PF04384 Iron-sulphur cluster assembly WwMa_RS01325 PF00830 Ribosomal L28 family WwMa_RS01330 PF04055 Radical SAM superfamily WwMa_RS01330 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WwMa_RS01340 PF00929 Exonuclease WwMa_RS01375 PF17862 AAA+ lid domain WwMa_RS01375 PF01434 Peptidase family M41 WwMa_RS01375 PF00004 ATPase family associated with various cellular activities (AAA) WwMa_RS01390 PF17760 UvrA interaction domain WwMa_RS01390 PF17755 UvrA DNA-binding domain WwMa_RS01400 PF00364 Biotin-requiring enzyme WwMa_RS01400 PF02779 Transketolase, pyrimidine binding domain WwMa_RS01400 PF02780 Transketolase, C-terminal domain WwMa_RS01410 PF10502 Signal peptidase, peptidase S26 WwMa_RS01415 PF00012 Hsp70 protein WwMa_RS01420 PF00226 DnaJ domain WwMa_RS01420 PF07743 HSCB C-terminal oligomerisation domain WwMa_RS01425 PF01521 Iron-sulphur cluster biosynthesis WwMa_RS01430 PF01592 NifU-like N terminal domain WwMa_RS01435 PF00448 SRP54-type protein, GTPase domain WwMa_RS01435 PF02881 SRP54-type protein, helical bundle domain WwMa_RS01440 PF18073 Rubredoxin metal binding domain WwMa_RS01445 PF07690 Major Facilitator Superfamily WwMa_RS01445 PF00083 Sugar (and other) transporter WwMa_RS01455 PF01131 DNA topoisomerase WwMa_RS01455 PF01751 Toprim domain WwMa_RS01455 PF13368 Topoisomerase C-terminal repeat WwMa_RS01455 PF01396 Topoisomerase DNA binding C4 zinc finger WwMa_RS01465 PF02534 Type IV secretory system Conjugative DNA transfer WwMa_RS01470 PF00437 Type II/IV secretion system protein WwMa_RS01485 PF04335 VirB8 protein WwMa_RS01490 PF00925 GTP cyclohydrolase II WwMa_RS01510 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS01525 PF02899 Phage integrase, N-terminal SAM-like domain WwMa_RS01525 PF00589 Phage integrase family WwMa_RS01535 PF01649 Ribosomal protein S20 WwMa_RS01540 PF00285 Citrate synthase, C-terminal domain WwMa_RS01555 PF01541 GIY-YIG catalytic domain WwMa_RS01560 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS01560 PF01548 Transposase WwMa_RS01575 PF05491 RuvB C-terminal winged helix domain WwMa_RS01575 PF05496 Holliday junction DNA helicase RuvB P-loop domain WwMa_RS01575 PF17864 RuvB AAA lid domain WwMa_RS01580 PF07499 RuvA, C-terminal domain WwMa_RS01580 PF01330 RuvA N terminal domain WwMa_RS01585 PF00034 Cytochrome c WwMa_RS01595 PF13361 UvrD-like helicase C-terminal domain WwMa_RS01595 PF00580 UvrD/REP helicase N-terminal domain WwMa_RS01605 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WwMa_RS01610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WwMa_RS01615 PF00361 Proton-conducting membrane transporter WwMa_RS01615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WwMa_RS01620 PF00361 Proton-conducting membrane transporter WwMa_RS01625 PF00361 Proton-conducting membrane transporter WwMa_RS01630 PF08279 HTH domain WwMa_RS01630 PF03099 Biotin/lipoate A/B protein ligase family WwMa_RS01630 PF02237 Biotin protein ligase C terminal domain WwMa_RS01635 PF03100 CcmE WwMa_RS01660 PF10531 SLBB domain WwMa_RS01660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WwMa_RS01660 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WwMa_RS01665 PF00707 Translation initiation factor IF-3, C-terminal domain WwMa_RS01665 PF05198 Translation initiation factor IF-3, N-terminal domain WwMa_RS01670 PF03129 Anticodon binding domain WwMa_RS01670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WwMa_RS01670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WwMa_RS01680 PF12838 4Fe-4S dicluster domain WwMa_RS01685 PF10396 GTP-binding protein TrmE N-terminus WwMa_RS01685 PF01926 50S ribosome-binding GTPase WwMa_RS01685 PF12631 MnmE helical domain WwMa_RS01695 PF07992 Pyridine nucleotide-disulphide oxidoreductase WwMa_RS01770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS01780 PF10609 NUBPL iron-transfer P-loop NTPase WwMa_RS01790 PF01548 Transposase WwMa_RS01790 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS01805 PF00579 tRNA synthetases class I (W and Y) WwMa_RS01835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS01845 PF00692 dUTPase WwMa_RS01850 PF02386 Cation transport protein WwMa_RS01865 PF01765 Ribosome recycling factor WwMa_RS01870 PF00696 Amino acid kinase family WwMa_RS01875 PF00889 Elongation factor TS WwMa_RS01880 PF00318 Ribosomal protein S2 WwMa_RS01890 PF02699 Preprotein translocase subunit WwMa_RS01895 PF01380 SIS domain WwMa_RS01915 PF00101 Ribulose bisphosphate carboxylase, small chain WwMa_RS01915 PF00132 Bacterial transferase hexapeptide (six repeats) WwMa_RS01925 PF00117 Glutamine amidotransferase class-I WwMa_RS01925 PF06418 CTP synthase N-terminus WwMa_RS01935 PF14437 MafB19-like deaminase WwMa_RS01950 PF00005 ABC transporter WwMa_RS01955 PF03485 Arginyl tRNA synthetase N terminal domain WwMa_RS01955 PF05746 DALR anticodon binding domain WwMa_RS01955 PF00750 tRNA synthetases class I (R) WwMa_RS01970 PF00664 ABC transporter transmembrane region WwMa_RS01970 PF00005 ABC transporter WwMa_RS01975 PF01209 ubiE/COQ5 methyltransferase family WwMa_RS01980 PF07690 Major Facilitator Superfamily WwMa_RS02015 PF01476 LysM domain WwMa_RS02015 PF08525 Opacity-associated protein A N-terminal motif WwMa_RS02015 PF01551 Peptidase family M23 WwMa_RS02020 PF01709 Transcriptional regulator WwMa_RS02035 PF01066 CDP-alcohol phosphatidyltransferase WwMa_RS02040 PF00390 Malic enzyme, N-terminal domain WwMa_RS02040 PF03949 Malic enzyme, NAD binding domain WwMa_RS02040 PF01515 Phosphate acetyl/butaryl transferase WwMa_RS02050 PF00462 Glutaredoxin WwMa_RS02055 PF00529 HlyD membrane-fusion protein of T1SS WwMa_RS02055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WwMa_RS02070 PF00391 PEP-utilising enzyme, mobile domain WwMa_RS02070 PF02896 PEP-utilising enzyme, TIM barrel domain WwMa_RS02070 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WwMa_RS02110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WwMa_RS02110 PF00925 GTP cyclohydrolase II WwMa_RS02115 PF03449 Transcription elongation factor, N-terminal WwMa_RS02115 PF01272 Transcription elongation factor, GreA/GreB, C-term WwMa_RS02120 PF02874 ATP synthase alpha/beta family, beta-barrel domain WwMa_RS02120 PF00306 ATP synthase alpha/beta chain, C terminal domain WwMa_RS02120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WwMa_RS02125 PF00213 ATP synthase delta (OSCP) subunit WwMa_RS02130 PF02021 Uncharacterised protein family UPF0102 WwMa_RS02135 PF01196 Ribosomal protein L17 WwMa_RS02140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WwMa_RS02140 PF01000 RNA polymerase Rpb3/RpoA insert domain WwMa_RS02140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WwMa_RS02145 PF00411 Ribosomal protein S11 WwMa_RS02150 PF00416 Ribosomal protein S13/S18 WwMa_RS02160 PF00344 SecY translocase WwMa_RS02165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WwMa_RS02170 PF00333 Ribosomal protein S5, N-terminal domain WwMa_RS02170 PF03719 Ribosomal protein S5, C-terminal domain WwMa_RS02175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WwMa_RS02180 PF00347 Ribosomal protein L6 WwMa_RS02185 PF00410 Ribosomal protein S8 WwMa_RS02190 PF00253 Ribosomal protein S14p/S29e WwMa_RS02195 PF00281 Ribosomal protein L5 WwMa_RS02195 PF00673 ribosomal L5P family C-terminus WwMa_RS02200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WwMa_RS02205 PF00238 Ribosomal protein L14p/L23e WwMa_RS02210 PF00366 Ribosomal protein S17 WwMa_RS02215 PF00831 Ribosomal L29 protein WwMa_RS02220 PF00252 Ribosomal protein L16p/L10e WwMa_RS02225 PF07650 KH domain WwMa_RS02225 PF00189 Ribosomal protein S3, C-terminal domain WwMa_RS02230 PF00237 Ribosomal protein L22p/L17e WwMa_RS02235 PF00203 Ribosomal protein S19 WwMa_RS02240 PF00181 Ribosomal Proteins L2, RNA binding domain WwMa_RS02240 PF03947 Ribosomal Proteins L2, C-terminal domain WwMa_RS02245 PF00276 Ribosomal protein L23 WwMa_RS02250 PF00573 Ribosomal protein L4/L1 family WwMa_RS02255 PF00297 Ribosomal protein L3 WwMa_RS02260 PF00338 Ribosomal protein S10p/S20e WwMa_RS02265 PF03143 Elongation factor Tu C-terminal domain WwMa_RS02265 PF03144 Elongation factor Tu domain 2 WwMa_RS02265 PF00009 Elongation factor Tu GTP binding domain WwMa_RS02280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WwMa_RS02280 PF00117 Glutamine amidotransferase class-I WwMa_RS02290 PF00923 Transaldolase/Fructose-6-phosphate aldolase WwMa_RS02300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WwMa_RS02305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WwMa_RS02305 PF02874 ATP synthase alpha/beta family, beta-barrel domain WwMa_RS02310 PF00528 Binding-protein-dependent transport system inner membrane component WwMa_RS02315 PF00468 Ribosomal protein L34 WwMa_RS02320 PF00825 Ribonuclease P WwMa_RS02345 PF03477 ATP cone domain WwMa_RS02345 PF02867 Ribonucleotide reductase, barrel domain WwMa_RS02345 PF00317 Ribonucleotide reductase, all-alpha domain WwMa_RS02350 PF03652 Holliday junction resolvase WwMa_RS02355 PF02075 Crossover junction endodeoxyribonuclease RuvC WwMa_RS02360 PF00510 Cytochrome c oxidase subunit III WwMa_RS02370 PF03070 TENA/THI-4/PQQC family WwMa_RS02375 PF02773 S-adenosylmethionine synthetase, C-terminal domain WwMa_RS02375 PF02772 S-adenosylmethionine synthetase, central domain WwMa_RS02375 PF00438 S-adenosylmethionine synthetase, N-terminal domain WwMa_RS02385 PF01016 Ribosomal L27 protein WwMa_RS02390 PF00829 Ribosomal prokaryotic L21 protein WwMa_RS02405 PF00132 Bacterial transferase hexapeptide (six repeats) WwMa_RS02405 PF14602 Hexapeptide repeat of succinyl-transferase WwMa_RS02405 PF12804 MobA-like NTP transferase domain WwMa_RS02410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WwMa_RS02410 PF01409 tRNA synthetases class II core domain (F) WwMa_RS02420 PF00677 Lumazine binding domain WwMa_RS02430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WwMa_RS02430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WwMa_RS02430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WwMa_RS02430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WwMa_RS02460 PF00476 DNA polymerase family A WwMa_RS02460 PF01367 5'-3' exonuclease, C-terminal SAM fold WwMa_RS02460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WwMa_RS02465 PF01425 Amidase WwMa_RS02470 PF00204 DNA gyrase B WwMa_RS02470 PF00986 DNA gyrase B subunit, carboxyl terminus WwMa_RS02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WwMa_RS02470 PF01751 Toprim domain WwMa_RS02485 PF02666 Phosphatidylserine decarboxylase WwMa_RS02490 PF01066 CDP-alcohol phosphatidyltransferase WwMa_RS02495 PF01235 Sodium:alanine symporter family WwMa_RS02500 PF01235 Sodium:alanine symporter family WwMa_RS02505 PF02660 Glycerol-3-phosphate acyltransferase WwMa_RS02515 PF01545 Cation efflux family WwMa_RS02535 PF01548 Transposase WwMa_RS02535 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS02545 PF01548 Transposase WwMa_RS02545 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS02570 PF08032 RNA 2'-O ribose methyltransferase substrate binding WwMa_RS02570 PF00588 SpoU rRNA Methylase family WwMa_RS02580 PF01541 GIY-YIG catalytic domain WwMa_RS02580 PF02151 UvrB/uvrC motif WwMa_RS02580 PF08459 UvrC Helix-hairpin-helix N-terminal WwMa_RS02585 PF02092 Glycyl-tRNA synthetase beta subunit WwMa_RS02585 PF05746 DALR anticodon binding domain WwMa_RS02590 PF02091 Glycyl-tRNA synthetase alpha subunit WwMa_RS02600 PF00490 Delta-aminolevulinic acid dehydratase WwMa_RS02605 PF00146 NADH dehydrogenase WwMa_RS02610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WwMa_RS02610 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WwMa_RS02610 PF00384 Molybdopterin oxidoreductase WwMa_RS02620 PF00883 Cytosol aminopeptidase family, catalytic domain WwMa_RS02620 PF02789 Cytosol aminopeptidase family, N-terminal domain WwMa_RS02630 PF01619 Proline dehydrogenase WwMa_RS02630 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WwMa_RS02630 PF00171 Aldehyde dehydrogenase family WwMa_RS02630 PF14850 DNA-binding domain of Proline dehydrogenase WwMa_RS02635 PF00330 Aconitase family (aconitate hydratase) WwMa_RS02635 PF00694 Aconitase C-terminal domain WwMa_RS02640 PF02556 Preprotein translocase subunit SecB WwMa_RS02650 PF00929 Exonuclease WwMa_RS02655 PF02630 SCO1/SenC WwMa_RS02660 PF00035 Double-stranded RNA binding motif WwMa_RS02660 PF14622 Ribonuclease-III-like WwMa_RS02665 PF01180 Dihydroorotate dehydrogenase WwMa_RS02680 PF01791 DeoC/LacD family aldolase WwMa_RS02690 PF17871 AAA lid domain WwMa_RS02690 PF07724 AAA domain (Cdc48 subfamily) WwMa_RS02690 PF02861 Clp amino terminal domain, pathogenicity island component WwMa_RS02690 PF10431 C-terminal, D2-small domain, of ClpB protein WwMa_RS02690 PF00004 ATPase family associated with various cellular activities (AAA) WwMa_RS02695 PF00270 DEAD/DEAH box helicase WwMa_RS02695 PF00271 Helicase conserved C-terminal domain WwMa_RS02700 PF00313 'Cold-shock' DNA-binding domain WwMa_RS02705 PF01523 Putative modulator of DNA gyrase WwMa_RS02710 PF00231 ATP synthase WwMa_RS02725 PF02687 FtsX-like permease family WwMa_RS02725 PF12704 MacB-like periplasmic core domain WwMa_RS02730 PF01050 Mannose-6-phosphate isomerase WwMa_RS02730 PF00483 Nucleotidyl transferase WwMa_RS02740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WwMa_RS02745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WwMa_RS02770 PF04542 Sigma-70 region 2 WwMa_RS02770 PF00140 Sigma-70 factor, region 1.2 WwMa_RS02770 PF04545 Sigma-70, region 4 WwMa_RS02770 PF04539 Sigma-70 region 3 WwMa_RS02770 PF04546 Sigma-70, non-essential region WwMa_RS02770 PF03979 Sigma-70 factor, region 1.1 WwMa_RS02775 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WwMa_RS02785 PF13244 Domain of unknown function (DUF4040) WwMa_RS02785 PF00361 Proton-conducting membrane transporter WwMa_RS02785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WwMa_RS02790 PF03334 Na+/H+ antiporter subunit WwMa_RS02800 PF01192 RNA polymerase Rpb6 WwMa_RS02810 PF00731 AIR carboxylase WwMa_RS02815 PF08676 MutL C terminal dimerisation domain WwMa_RS02815 PF01119 DNA mismatch repair protein, C-terminal domain WwMa_RS02820 PF01145 SPFH domain / Band 7 family WwMa_RS02825 PF01145 SPFH domain / Band 7 family WwMa_RS02830 PF13180 PDZ domain WwMa_RS02840 PF01548 Transposase WwMa_RS02840 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS02850 PF00293 NUDIX domain WwMa_RS02855 PF01026 TatD related DNase WwMa_RS02860 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WwMa_RS02860 PF00056 lactate/malate dehydrogenase, NAD binding domain WwMa_RS02865 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WwMa_RS02870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WwMa_RS02875 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WwMa_RS02880 PF01230 HIT domain WwMa_RS02895 PF02875 Mur ligase family, glutamate ligase domain WwMa_RS02895 PF08245 Mur ligase middle domain WwMa_RS02895 PF01225 Mur ligase family, catalytic domain WwMa_RS02900 PF01370 NAD dependent epimerase/dehydratase family WwMa_RS02900 PF08338 Domain of unknown function (DUF1731) WwMa_RS02910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WwMa_RS02910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WwMa_RS02915 PF02504 Fatty acid synthesis protein WwMa_RS02920 PF01783 Ribosomal L32p protein family WwMa_RS02925 PF02405 Permease MlaE WwMa_RS02930 PF08402 TOBE domain WwMa_RS02930 PF00005 ABC transporter WwMa_RS02935 PF02881 SRP54-type protein, helical bundle domain WwMa_RS02935 PF02978 Signal peptide binding domain WwMa_RS02935 PF00448 SRP54-type protein, GTPase domain WwMa_RS02945 PF07992 Pyridine nucleotide-disulphide oxidoreductase WwMa_RS02950 PF07977 FabA-like domain WwMa_RS02960 PF07244 Surface antigen variable number repeat WwMa_RS02960 PF01103 Surface antigen WwMa_RS02965 PF02163 Peptidase family M50 WwMa_RS02965 PF17820 PDZ domain WwMa_RS02980 PF00216 Bacterial DNA-binding protein WwMa_RS02985 PF00575 S1 RNA binding domain WwMa_RS02990 PF02390 Putative methyltransferase WwMa_RS03015 PF01548 Transposase WwMa_RS03015 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS03020 PF02245 Methylpurine-DNA glycosylase (MPG) WwMa_RS03030 PF00953 Glycosyl transferase family 4 WwMa_RS03035 PF01351 Ribonuclease HII WwMa_RS03055 PF02769 AIR synthase related protein, C-terminal domain WwMa_RS03055 PF00586 AIR synthase related protein, N-terminal domain WwMa_RS03060 PF01259 SAICAR synthetase WwMa_RS03065 PF01746 tRNA (Guanine-1)-methyltransferase WwMa_RS03070 PF01245 Ribosomal protein L19 WwMa_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component WwMa_RS03090 PF01243 Pyridoxamine 5'-phosphate oxidase WwMa_RS03090 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WwMa_RS03095 PF06827 Zinc finger found in FPG and IleRS WwMa_RS03095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WwMa_RS03095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WwMa_RS03120 PF01039 Carboxyl transferase domain WwMa_RS03130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WwMa_RS03130 PF01926 50S ribosome-binding GTPase WwMa_RS03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase WwMa_RS03150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WwMa_RS03160 PF04101 Glycosyltransferase family 28 C-terminal domain WwMa_RS03160 PF03033 Glycosyltransferase family 28 N-terminal domain WwMa_RS03165 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WwMa_RS03165 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WwMa_RS03170 PF00578 AhpC/TSA family WwMa_RS03175 PF02463 RecF/RecN/SMC N terminal domain WwMa_RS03180 PF00696 Amino acid kinase family WwMa_RS03180 PF13840 ACT domain WwMa_RS03180 PF01842 ACT domain WwMa_RS03185 PF02254 TrkA-N domain WwMa_RS03185 PF00999 Sodium/hydrogen exchanger family WwMa_RS03195 PF02223 Thymidylate kinase WwMa_RS03205 PF00753 Metallo-beta-lactamase superfamily WwMa_RS03205 PF03772 Competence protein WwMa_RS03230 PF01219 Prokaryotic diacylglycerol kinase WwMa_RS03235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WwMa_RS03235 PF02142 MGS-like domain WwMa_RS03235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WwMa_RS03245 PF03631 Virulence factor BrkB WwMa_RS03260 PF13537 Glutamine amidotransferase domain WwMa_RS03260 PF00156 Phosphoribosyl transferase domain WwMa_RS03270 PF01548 Transposase WwMa_RS03270 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS03300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS03315 PF00155 Aminotransferase class I and II WwMa_RS03325 PF09285 Elongation factor P, C-terminal WwMa_RS03325 PF01132 Elongation factor P (EF-P) OB domain WwMa_RS03325 PF08207 Elongation factor P (EF-P) KOW-like domain WwMa_RS03330 PF05239 PRC-barrel domain WwMa_RS03330 PF01782 RimM N-terminal domain WwMa_RS03340 PF00202 Aminotransferase class-III WwMa_RS03345 PF13426 PAS domain WwMa_RS03345 PF13188 PAS domain WwMa_RS03345 PF00989 PAS fold WwMa_RS03345 PF00512 His Kinase A (phospho-acceptor) domain WwMa_RS03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WwMa_RS03355 PF00814 Glycoprotease family WwMa_RS03365 PF00005 ABC transporter WwMa_RS03365 PF00664 ABC transporter transmembrane region WwMa_RS03375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WwMa_RS03375 PF00364 Biotin-requiring enzyme WwMa_RS03375 PF02817 e3 binding domain WwMa_RS03390 PF00004 ATPase family associated with various cellular activities (AAA) WwMa_RS03390 PF01434 Peptidase family M41 WwMa_RS03390 PF06480 FtsH Extracellular WwMa_RS03390 PF17862 AAA+ lid domain WwMa_RS03400 PF01171 PP-loop family WwMa_RS03405 PF00691 OmpA family WwMa_RS03430 PF00719 Inorganic pyrophosphatase WwMa_RS03440 PF09312 SurA N-terminal domain WwMa_RS03445 PF07992 Pyridine nucleotide-disulphide oxidoreductase WwMa_RS03470 PF02401 LytB protein WwMa_RS03495 PF00436 Single-strand binding protein family WwMa_RS03500 PF00701 Dihydrodipicolinate synthetase family WwMa_RS03505 PF00107 Zinc-binding dehydrogenase WwMa_RS03505 PF08240 Alcohol dehydrogenase GroES-like domain WwMa_RS03515 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WwMa_RS03520 PF01027 Inhibitor of apoptosis-promoting Bax1 WwMa_RS03525 PF00266 Aminotransferase class-V WwMa_RS03530 PF02129 X-Pro dipeptidyl-peptidase (S15 family) WwMa_RS03535 PF00005 ABC transporter WwMa_RS03540 PF01521 Iron-sulphur cluster biosynthesis WwMa_RS03545 PF13286 Phosphohydrolase-associated domain WwMa_RS03545 PF01966 HD domain WwMa_RS03550 PF01872 RibD C-terminal domain WwMa_RS03550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WwMa_RS03560 PF01509 TruB family pseudouridylate synthase (N terminal domain) WwMa_RS03560 PF16198 tRNA pseudouridylate synthase B C-terminal domain WwMa_RS03565 PF00312 Ribosomal protein S15 WwMa_RS03570 PF00013 KH domain WwMa_RS03570 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WwMa_RS03570 PF03725 3' exoribonuclease family, domain 2 WwMa_RS03570 PF00575 S1 RNA binding domain WwMa_RS03570 PF01138 3' exoribonuclease family, domain 1 WwMa_RS03575 PF00834 Ribulose-phosphate 3 epimerase family WwMa_RS03590 PF00162 Phosphoglycerate kinase WwMa_RS03595 PF00464 Serine hydroxymethyltransferase WwMa_RS03610 PF00893 Small Multidrug Resistance protein WwMa_RS03615 PF00155 Aminotransferase class I and II WwMa_RS03620 PF01208 Uroporphyrinogen decarboxylase (URO-D) WwMa_RS03625 PF00571 CBS domain WwMa_RS03625 PF03471 Transporter associated domain WwMa_RS03645 PF00361 Proton-conducting membrane transporter WwMa_RS03650 PF01098 Cell cycle protein WwMa_RS03655 PF00266 Aminotransferase class-V WwMa_RS03660 PF04002 RadC-like JAB domain WwMa_RS03695 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS03695 PF01548 Transposase WwMa_RS03705 PF03232 Ubiquinone biosynthesis protein COQ7 WwMa_RS03710 PF03167 Uracil DNA glycosylase superfamily WwMa_RS03715 PF01327 Polypeptide deformylase WwMa_RS03720 PF02491 SHS2 domain inserted in FTSA WwMa_RS03730 PF00083 Sugar (and other) transporter WwMa_RS03735 PF01795 MraW methylase family WwMa_RS03745 PF14693 Ribosomal protein TL5, C-terminal domain WwMa_RS03745 PF01386 Ribosomal L25p family WwMa_RS03750 PF01195 Peptidyl-tRNA hydrolase WwMa_RS03755 PF00154 recA bacterial DNA recombination protein WwMa_RS03760 PF01416 tRNA pseudouridine synthase WwMa_RS03765 PF02768 DNA polymerase III beta subunit, C-terminal domain WwMa_RS03765 PF02767 DNA polymerase III beta subunit, central domain WwMa_RS03765 PF00712 DNA polymerase III beta subunit, N-terminal domain WwMa_RS03775 PF04545 Sigma-70, region 4 WwMa_RS03775 PF04542 Sigma-70 region 2 WwMa_RS03775 PF00140 Sigma-70 factor, region 1.2 WwMa_RS03780 PF13505 Outer membrane protein beta-barrel domain WwMa_RS03785 PF02575 YbaB/EbfC DNA-binding family WwMa_RS03790 PF12169 DNA polymerase III subunits gamma and tau domain III WwMa_RS03820 PF13462 Thioredoxin WwMa_RS03825 PF03364 Polyketide cyclase / dehydrase and lipid transport WwMa_RS03840 PF08245 Mur ligase middle domain WwMa_RS03840 PF02875 Mur ligase family, glutamate ligase domain WwMa_RS03865 PF01523 Putative modulator of DNA gyrase WwMa_RS03880 PF00355 Rieske [2Fe-2S] domain WwMa_RS03880 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WwMa_RS03885 PF03989 DNA gyrase C-terminal domain, beta-propeller WwMa_RS03885 PF00521 DNA gyrase/topoisomerase IV, subunit A WwMa_RS03905 PF02632 BioY family WwMa_RS03910 PF00881 Nitroreductase family WwMa_RS03920 PF01678 Diaminopimelate epimerase WwMa_RS03925 PF02629 CoA binding domain WwMa_RS03925 PF00549 CoA-ligase WwMa_RS03930 PF08442 ATP-grasp domain WwMa_RS03930 PF00549 CoA-ligase WwMa_RS03945 PF04452 RNA methyltransferase WwMa_RS03960 PF01218 Coproporphyrinogen III oxidase WwMa_RS03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WwMa_RS03965 PF08448 PAS fold WwMa_RS03965 PF13188 PAS domain WwMa_RS03965 PF00072 Response regulator receiver domain WwMa_RS03965 PF00512 His Kinase A (phospho-acceptor) domain WwMa_RS03970 PF13614 AAA domain WwMa_RS03975 PF17762 HTH domain found in ParB protein WwMa_RS03975 PF02195 ParB-like nuclease domain WwMa_RS03980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WwMa_RS03980 PF02542 YgbB family WwMa_RS03995 PF01594 AI-2E family transporter WwMa_RS04005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS04030 PF00183 Hsp90 protein WwMa_RS04045 PF13662 Toprim domain WwMa_RS04045 PF02132 RecR protein WwMa_RS04060 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WwMa_RS04060 PF18074 Primosomal protein N C-terminal domain WwMa_RS04060 PF17764 3′ DNA-binding domain (3′BD) WwMa_RS04060 PF00270 DEAD/DEAH box helicase WwMa_RS04085 PF02511 Thymidylate synthase complementing protein WwMa_RS04090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WwMa_RS04100 PF02801 Beta-ketoacyl synthase, C-terminal domain WwMa_RS04100 PF00109 Beta-ketoacyl synthase, N-terminal domain WwMa_RS04105 PF00550 Phosphopantetheine attachment site WwMa_RS04110 PF00348 Polyprenyl synthetase WwMa_RS04120 PF07724 AAA domain (Cdc48 subfamily) WwMa_RS04120 PF10431 C-terminal, D2-small domain, of ClpB protein WwMa_RS04120 PF00004 ATPase family associated with various cellular activities (AAA) WwMa_RS04125 PF00227 Proteasome subunit WwMa_RS04140 PF00762 Ferrochelatase WwMa_RS04150 PF01548 Transposase WwMa_RS04150 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS04155 PF00334 Nucleoside diphosphate kinase WwMa_RS04160 PF00202 Aminotransferase class-III WwMa_RS04165 PF00571 CBS domain WwMa_RS04165 PF03471 Transporter associated domain WwMa_RS04165 PF01595 Cyclin M transmembrane N-terminal domain WwMa_RS04170 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) WwMa_RS04175 PF02441 Flavoprotein WwMa_RS04180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WwMa_RS04180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WwMa_RS04190 PF08264 Anticodon-binding domain of tRNA WwMa_RS04190 PF00133 tRNA synthetases class I (I, L, M and V) WwMa_RS04190 PF13603 Leucyl-tRNA synthetase, Domain 2 WwMa_RS04190 PF09334 tRNA synthetases class I (M) WwMa_RS04195 PF01551 Peptidase family M23 WwMa_RS04200 PF13411 MerR HTH family regulatory protein WwMa_RS04205 PF00216 Bacterial DNA-binding protein WwMa_RS04215 PF12344 Ultra-violet resistance protein B WwMa_RS04215 PF02151 UvrB/uvrC motif WwMa_RS04215 PF04851 Type III restriction enzyme, res subunit WwMa_RS04215 PF00271 Helicase conserved C-terminal domain WwMa_RS04215 PF17757 UvrB interaction domain WwMa_RS04220 PF02167 Cytochrome C1 family WwMa_RS04220 PF00032 Cytochrome b(C-terminal)/b6/petD WwMa_RS04220 PF00033 Cytochrome b/b6/petB WwMa_RS04225 PF00032 Cytochrome b(C-terminal)/b6/petD WwMa_RS04225 PF00033 Cytochrome b/b6/petB WwMa_RS04255 PF03129 Anticodon binding domain WwMa_RS04255 PF13393 Histidyl-tRNA synthetase WwMa_RS04260 PF01975 Survival protein SurE WwMa_RS04270 PF13520 Amino acid permease WwMa_RS04285 PF01118 Semialdehyde dehydrogenase, NAD binding domain WwMa_RS04285 PF02774 Semialdehyde dehydrogenase, dimerisation domain WwMa_RS04290 PF02222 ATP-grasp domain WwMa_RS04290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WwMa_RS04295 PF04379 ApaG domain WwMa_RS04300 PF00528 Binding-protein-dependent transport system inner membrane component WwMa_RS04365 PF07650 KH domain WwMa_RS04365 PF01926 50S ribosome-binding GTPase WwMa_RS04385 PF00085 Thioredoxin WwMa_RS04405 PF03070 TENA/THI-4/PQQC family WwMa_RS04410 PF02152 Dihydroneopterin aldolase WwMa_RS04415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WwMa_RS04415 PF00809 Pterin binding enzyme WwMa_RS04420 PF00186 Dihydrofolate reductase WwMa_RS04445 PF01546 Peptidase family M20/M25/M40 WwMa_RS04445 PF07687 Peptidase dimerisation domain WwMa_RS04450 PF13685 Iron-containing alcohol dehydrogenase WwMa_RS04465 PF10397 Adenylosuccinate lyase C-terminus WwMa_RS04465 PF00206 Lyase WwMa_RS04470 PF01281 Ribosomal protein L9, N-terminal domain WwMa_RS04470 PF03948 Ribosomal protein L9, C-terminal domain WwMa_RS04475 PF01084 Ribosomal protein S18 WwMa_RS04480 PF01250 Ribosomal protein S6 WwMa_RS04485 PF02811 PHP domain WwMa_RS04485 PF14579 Helix-hairpin-helix motif WwMa_RS04485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WwMa_RS04485 PF07733 Bacterial DNA polymerase III alpha NTPase domain WwMa_RS04495 PF17676 LD-carboxypeptidase C-terminal domain WwMa_RS04495 PF02016 LD-carboxypeptidase N-terminal domain WwMa_RS04500 PF03099 Biotin/lipoate A/B protein ligase family WwMa_RS04530 PF03023 Lipid II flippase MurJ WwMa_RS04545 PF13932 GidA associated domain WwMa_RS04545 PF01134 Glucose inhibited division protein A WwMa_RS04550 PF00557 Metallopeptidase family M24 WwMa_RS04550 PF01321 Creatinase/Prolidase N-terminal domain WwMa_RS04580 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WwMa_RS04595 PF03060 Nitronate monooxygenase WwMa_RS04610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WwMa_RS04615 PF02272 DHHA1 domain WwMa_RS04615 PF01368 DHH family WwMa_RS04615 PF17768 RecJ OB domain WwMa_RS04620 PF01938 TRAM domain WwMa_RS04620 PF04055 Radical SAM superfamily WwMa_RS04620 PF00919 Uncharacterized protein family UPF0004 WwMa_RS04625 PF00133 tRNA synthetases class I (I, L, M and V) WwMa_RS04625 PF08264 Anticodon-binding domain of tRNA WwMa_RS04635 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WwMa_RS04635 PF01588 Putative tRNA binding domain WwMa_RS04635 PF03147 Ferredoxin-fold anticodon binding domain WwMa_RS04635 PF03484 tRNA synthetase B5 domain WwMa_RS04635 PF03483 B3/4 domain WwMa_RS04645 PF00119 ATP synthase A chain WwMa_RS04650 PF00137 ATP synthase subunit C WwMa_RS04670 PF02628 Cytochrome oxidase assembly protein WwMa_RS04675 PF00289 Biotin carboxylase, N-terminal domain WwMa_RS04675 PF00364 Biotin-requiring enzyme WwMa_RS04675 PF02785 Biotin carboxylase C-terminal domain WwMa_RS04675 PF18140 Propionyl-coenzyme A carboxylase BT domain WwMa_RS04675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WwMa_RS04685 PF00749 tRNA synthetases class I (E and Q), catalytic domain WwMa_RS04695 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WwMa_RS04705 PF00380 Ribosomal protein S9/S16 WwMa_RS04710 PF00572 Ribosomal protein L13 WwMa_RS04720 PF10691 Protein of unknown function (DUF2497) WwMa_RS04725 PF01728 FtsJ-like methyltransferase WwMa_RS04735 PF01921 tRNA synthetases class I (K) WwMa_RS04745 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WwMa_RS04750 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WwMa_RS04755 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WwMa_RS04765 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WwMa_RS04780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WwMa_RS04780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WwMa_RS04785 PF00675 Insulinase (Peptidase family M16) WwMa_RS04785 PF05193 Peptidase M16 inactive domain WwMa_RS04795 PF01702 Queuine tRNA-ribosyltransferase WwMa_RS04815 PF00072 Response regulator receiver domain WwMa_RS04815 PF00486 Transcriptional regulatory protein, C terminal WwMa_RS04820 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WwMa_RS04820 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WwMa_RS04825 PF04608 Phosphatidylglycerophosphatase A WwMa_RS04840 PF13085 2Fe-2S iron-sulfur cluster binding domain WwMa_RS04845 PF02130 Uncharacterized protein family UPF0054 WwMa_RS04860 PF12327 FtsZ family, C-terminal domain WwMa_RS04860 PF00091 Tubulin/FtsZ family, GTPase domain WwMa_RS04870 PF01078 Magnesium chelatase, subunit ChlI WwMa_RS04870 PF13335 Magnesium chelatase, subunit ChlI C-terminal WwMa_RS04875 PF01522 Polysaccharide deacetylase WwMa_RS04880 PF03717 Penicillin-binding Protein dimerisation domain WwMa_RS04880 PF00905 Penicillin binding protein transpeptidase domain WwMa_RS04885 PF00004 ATPase family associated with various cellular activities (AAA) WwMa_RS04885 PF02190 ATP-dependent protease La (LON) substrate-binding domain WwMa_RS04885 PF05362 Lon protease (S16) C-terminal proteolytic domain WwMa_RS04890 PF07724 AAA domain (Cdc48 subfamily) WwMa_RS04890 PF10431 C-terminal, D2-small domain, of ClpB protein WwMa_RS04890 PF06689 ClpX C4-type zinc finger WwMa_RS04895 PF00574 Clp protease WwMa_RS04900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WwMa_RS04900 PF05698 Bacterial trigger factor protein (TF) C-terminus WwMa_RS04900 PF05697 Bacterial trigger factor protein (TF) WwMa_RS04910 PF04972 BON domain WwMa_RS04925 PF02390 Putative methyltransferase WwMa_RS04925 PF05175 Methyltransferase small domain WwMa_RS04925 PF17827 PrmC N-terminal domain WwMa_RS04930 PF00164 Ribosomal protein S12/S23 WwMa_RS04935 PF00177 Ribosomal protein S7p/S5e WwMa_RS04940 PF03764 Elongation factor G, domain IV WwMa_RS04940 PF03144 Elongation factor Tu domain 2 WwMa_RS04940 PF00009 Elongation factor Tu GTP binding domain WwMa_RS04940 PF14492 Elongation Factor G, domain II WwMa_RS04940 PF00679 Elongation factor G C-terminus WwMa_RS04945 PF03143 Elongation factor Tu C-terminal domain WwMa_RS04945 PF00009 Elongation factor Tu GTP binding domain WwMa_RS04945 PF03144 Elongation factor Tu domain 2 WwMa_RS04960 PF02357 Transcription termination factor nusG WwMa_RS04960 PF00467 KOW motif WwMa_RS04965 PF00298 Ribosomal protein L11, RNA binding domain WwMa_RS04965 PF03946 Ribosomal protein L11, N-terminal domain WwMa_RS04970 PF00687 Ribosomal protein L1p/L10e family WwMa_RS04975 PF00466 Ribosomal protein L10 WwMa_RS04980 PF16320 Ribosomal protein L7/L12 dimerisation domain WwMa_RS04980 PF00542 Ribosomal protein L7/L12 C-terminal domain WwMa_RS04985 PF00562 RNA polymerase Rpb2, domain 6 WwMa_RS04985 PF10385 RNA polymerase beta subunit external 1 domain WwMa_RS04985 PF00623 RNA polymerase Rpb1, domain 2 WwMa_RS04985 PF04983 RNA polymerase Rpb1, domain 3 WwMa_RS04985 PF04563 RNA polymerase beta subunit WwMa_RS04985 PF04998 RNA polymerase Rpb1, domain 5 WwMa_RS04985 PF05000 RNA polymerase Rpb1, domain 4 WwMa_RS04985 PF04560 RNA polymerase Rpb2, domain 7 WwMa_RS04985 PF04997 RNA polymerase Rpb1, domain 1 WwMa_RS04985 PF04565 RNA polymerase Rpb2, domain 3 WwMa_RS04985 PF04561 RNA polymerase Rpb2, domain 2 WwMa_RS04990 PF01207 Dihydrouridine synthase (Dus) WwMa_RS05000 PF02403 Seryl-tRNA synthetase N-terminal domain WwMa_RS05000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WwMa_RS05005 PF02844 Phosphoribosylglycinamide synthetase, N domain WwMa_RS05005 PF02843 Phosphoribosylglycinamide synthetase, C domain WwMa_RS05005 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WwMa_RS05015 PF18324 Hypothetical protein TT1725 WwMa_RS05015 PF00180 Isocitrate/isopropylmalate dehydrogenase WwMa_RS05025 PF00730 HhH-GPD superfamily base excision DNA repair protein WwMa_RS05025 PF00633 Helix-hairpin-helix motif WwMa_RS05025 PF10576 Iron-sulfur binding domain of endonuclease III WwMa_RS05030 PF02142 MGS-like domain WwMa_RS05030 PF01808 AICARFT/IMPCHase bienzyme WwMa_RS05040 PF02911 Formyl transferase, C-terminal domain WwMa_RS05040 PF00551 Formyl transferase WwMa_RS05045 PF00453 Ribosomal protein L20 WwMa_RS05050 PF01632 Ribosomal protein L35 WwMa_RS05070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WwMa_RS05070 PF01411 tRNA synthetases class II (A) WwMa_RS05070 PF02272 DHHA1 domain WwMa_RS05085 PF01676 Metalloenzyme superfamily WwMa_RS05085 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WwMa_RS05090 PF00698 Acyl transferase domain WwMa_RS05095 PF01197 Ribosomal protein L31 WwMa_RS05100 PF01513 ATP-NAD kinase WwMa_RS05105 PF01548 Transposase WwMa_RS05105 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS05120 PF13416 Bacterial extracellular solute-binding protein WwMa_RS05125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WwMa_RS05125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WwMa_RS05140 PF00625 Guanylate kinase WwMa_RS05150 PF00890 FAD binding domain WwMa_RS05150 PF02910 Fumarate reductase flavoprotein C-term WwMa_RS05165 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WwMa_RS05165 PF14602 Hexapeptide repeat of succinyl-transferase WwMa_RS05165 PF00132 Bacterial transferase hexapeptide (six repeats) WwMa_RS05195 PF08245 Mur ligase middle domain WwMa_RS05215 PF04002 RadC-like JAB domain WwMa_RS05225 PF01119 DNA mismatch repair protein, C-terminal domain WwMa_RS05225 PF08676 MutL C terminal dimerisation domain WwMa_RS05230 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS05235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WwMa_RS05235 PF01348 Type II intron maturase WwMa_RS05250 PF14602 Hexapeptide repeat of succinyl-transferase WwMa_RS05250 PF12804 MobA-like NTP transferase domain WwMa_RS05250 PF00132 Bacterial transferase hexapeptide (six repeats) WwMa_RS05255 PF01370 NAD dependent epimerase/dehydratase family WwMa_RS05275 PF00664 ABC transporter transmembrane region WwMa_RS05275 PF00005 ABC transporter WwMa_RS05280 PF01212 Beta-eliminating lyase WwMa_RS05285 PF01212 Beta-eliminating lyase WwMa_RS05295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WwMa_RS05295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WwMa_RS05295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WwMa_RS05300 PF00892 EamA-like transporter family WwMa_RS05315 PF00121 Triosephosphate isomerase WwMa_RS05325 PF00398 Ribosomal RNA adenine dimethylase WwMa_RS05330 PF00571 CBS domain WwMa_RS05330 PF00478 IMP dehydrogenase / GMP reductase domain WwMa_RS05335 PF07498 Rho termination factor, N-terminal domain WwMa_RS05335 PF07497 Rho termination factor, RNA-binding domain WwMa_RS05335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WwMa_RS05355 PF00886 Ribosomal protein S16 WwMa_RS05360 PF00348 Polyprenyl synthetase WwMa_RS05365 PF01025 GrpE WwMa_RS05370 PF00579 tRNA synthetases class I (W and Y) WwMa_RS05380 PF16870 2-oxoglutarate dehydrogenase C-terminal WwMa_RS05380 PF02779 Transketolase, pyrimidine binding domain WwMa_RS05380 PF16078 2-oxoglutarate dehydrogenase N-terminus WwMa_RS05380 PF00676 Dehydrogenase E1 component WwMa_RS05420 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WwMa_RS05425 PF13091 PLD-like domain WwMa_RS05435 PF01790 Prolipoprotein diacylglyceryl transferase WwMa_RS05440 PF01668 SmpB protein WwMa_RS05460 PF00551 Formyl transferase WwMa_RS05475 PF00675 Insulinase (Peptidase family M16) WwMa_RS05475 PF05193 Peptidase M16 inactive domain WwMa_RS05480 PF01252 Signal peptidase (SPase) II WwMa_RS05485 PF01687 Riboflavin kinase WwMa_RS05485 PF06574 FAD synthetase WwMa_RS05490 PF00462 Glutaredoxin WwMa_RS05500 PF06421 GTP-binding protein LepA C-terminus WwMa_RS05500 PF00679 Elongation factor G C-terminus WwMa_RS05500 PF14492 Elongation Factor G, domain II WwMa_RS05500 PF00009 Elongation factor Tu GTP binding domain WwMa_RS05500 PF03144 Elongation factor Tu domain 2 WwMa_RS05515 PF03471 Transporter associated domain WwMa_RS05515 PF03741 Integral membrane protein TerC family WwMa_RS05520 PF00117 Glutamine amidotransferase class-I WwMa_RS05520 PF02540 NAD synthase WwMa_RS05520 PF00958 GMP synthase C terminal domain WwMa_RS05525 PF03958 Bacterial type II/III secretion system short domain WwMa_RS05525 PF00263 Bacterial type II and III secretion system protein WwMa_RS05535 PF01578 Cytochrome C assembly protein WwMa_RS05540 PF03618 Kinase/pyrophosphorylase WwMa_RS05545 PF00444 Ribosomal protein L36 WwMa_RS05550 PF00271 Helicase conserved C-terminal domain WwMa_RS05550 PF00270 DEAD/DEAH box helicase WwMa_RS05550 PF17191 RecG wedge domain WwMa_RS05565 PF00919 Uncharacterized protein family UPF0004 WwMa_RS05565 PF04055 Radical SAM superfamily WwMa_RS05580 PF13358 DDE superfamily endonuclease WwMa_RS05585 PF02355 Protein export membrane protein WwMa_RS05595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WwMa_RS05595 PF03900 Porphobilinogen deaminase, C-terminal domain WwMa_RS05600 PF01565 FAD binding domain WwMa_RS05600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WwMa_RS05610 PF00375 Sodium:dicarboxylate symporter family WwMa_RS05615 PF00156 Phosphoribosyl transferase domain WwMa_RS05655 PF02371 Transposase IS116/IS110/IS902 family WwMa_RS05655 PF01548 Transposase WwMa_RS05660 PF17761 DUF1016 N-terminal domain WwMa_RS05660 PF06250 YhcG PDDEXK nuclease domain WwMa_RS05705 PF03462 PCRF domain WwMa_RS05705 PF00472 RF-1 domain WwMa_RS05710 PF01926 50S ribosome-binding GTPase WwMa_RS05715 PF00696 Amino acid kinase family WwMa_RS05725 PF07690 Major Facilitator Superfamily WwMa_RS05745 PF01297 Zinc-uptake complex component A periplasmic WwMa_RS05750 PF00005 ABC transporter WwMa_RS05755 PF03109 ABC1 family WwMa_RS05765 PF00471 Ribosomal protein L33 WwMa_RS05770 PF12111 Polyribonucleotide phosphorylase C terminal WwMa_RS05770 PF10150 Ribonuclease E/G family WwMa_RS05770 PF00575 S1 RNA binding domain WwMa_RS05775 PF00012 Hsp70 protein WwMa_RS05780 PF01722 BolA-like protein WwMa_RS05785 PF01053 Cys/Met metabolism PLP-dependent enzyme WwMa_RS05790 PF08245 Mur ligase middle domain WwMa_RS05790 PF02875 Mur ligase family, glutamate ligase domain WwMa_RS05805 PF01300 Telomere recombination WwMa_RS05810 PF09115 DNA polymerase III, delta subunit, C terminal WwMa_RS05825 PF13244 Domain of unknown function (DUF4040) WwMa_RS05825 PF00361 Proton-conducting membrane transporter WwMa_RS05825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WwMa_RS05830 PF00772 DnaB-like helicase N terminal domain WwMa_RS05830 PF03796 DnaB-like helicase C terminal domain WwMa_RS05860 PF01979 Amidohydrolase family WwMa_RS05865 PF01612 3'-5' exonuclease WwMa_RS05865 PF00570 HRDC domain WwMa_RS05870 PF01121 Dephospho-CoA kinase WwMa_RS05900 PF08264 Anticodon-binding domain of tRNA WwMa_RS05900 PF09334 tRNA synthetases class I (M) WwMa_RS05920 PF13276 HTH-like domain WwMa_RS05920 PF00665 Integrase core domain WwMa_RS05920 PF13333 Integrase core domain WwMa_RS05950 PF01040 UbiA prenyltransferase family WwMa_RS05955 PF02033 Ribosome-binding factor A WwMa_RS05960 PF00009 Elongation factor Tu GTP binding domain WwMa_RS05960 PF11987 Translation-initiation factor 2 WwMa_RS05960 PF04760 Translation initiation factor IF-2, N-terminal region WwMa_RS05965 PF13184 NusA-like KH domain WwMa_RS05965 PF08529 NusA N-terminal domain WwMa_RS05965 PF00575 S1 RNA binding domain WwMa_RS05980 PF00120 Glutamine synthetase, catalytic domain WwMa_RS06210 PF00226 DnaJ domain WwMa_RS06210 PF01556 DnaJ C terminal domain WwMa_RS06210 PF00684 DnaJ central domain WwMa_RS06225 PF12796 Ankyrin repeats (3 copies) WwMa_RS06230 PF00011 Hsp20/alpha crystallin family WwMa_RS06280 PF00873 AcrB/AcrD/AcrF family WwMa_RS06285 PF00873 AcrB/AcrD/AcrF family WwMa_RS06305 PF08264 Anticodon-binding domain of tRNA WwMa_RS06305 PF00133 tRNA synthetases class I (I, L, M and V)