locus-tag class description ASM33_RS00010 PF02899 Phage integrase, N-terminal SAM-like domain ASM33_RS00010 PF00589 Phage integrase family ASM33_RS00035 PF00075 RNase H ASM33_RS00045 PF00665 Integrase core domain ASM33_RS00050 PF02630 SCO1/SenC ASM33_RS00060 PF00692 dUTPase ASM33_RS00090 PF05088 Bacterial NAD-glutamate dehydrogenase ASM33_RS00100 PF00072 Response regulator receiver domain ASM33_RS00100 PF00990 Diguanylate cyclase, GGDEF domain ASM33_RS00105 PF03232 Ubiquinone biosynthesis protein COQ7 ASM33_RS00120 PF00709 Adenylosuccinate synthetase ASM33_RS00140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ASM33_RS00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ASM33_RS00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ASM33_RS00165 PF00675 Insulinase (Peptidase family M16) ASM33_RS00165 PF05193 Peptidase M16 inactive domain ASM33_RS00185 PF04379 ApaG domain ASM33_RS00220 PF00361 Proton-conducting membrane transporter ASM33_RS00245 PF00330 Aconitase family (aconitate hydratase) ASM33_RS00245 PF00694 Aconitase C-terminal domain ASM33_RS00250 PF02556 Preprotein translocase subunit SecB ASM33_RS00260 PF00929 Exonuclease ASM33_RS00275 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ASM33_RS00290 PF00227 Proteasome subunit ASM33_RS00295 PF00004 ATPase family associated with various cellular activities (AAA) ASM33_RS00295 PF07724 AAA domain (Cdc48 subfamily) ASM33_RS00295 PF10431 C-terminal, D2-small domain, of ClpB protein ASM33_RS00300 PF10431 C-terminal, D2-small domain, of ClpB protein ASM33_RS00300 PF02861 Clp amino terminal domain, pathogenicity island component ASM33_RS00300 PF17871 AAA lid domain ASM33_RS00300 PF07724 AAA domain (Cdc48 subfamily) ASM33_RS00300 PF00004 ATPase family associated with various cellular activities (AAA) ASM33_RS00315 PF10415 Fumarase C C-terminus ASM33_RS00315 PF00206 Lyase ASM33_RS00335 PF00239 Resolvase, N terminal domain ASM33_RS00335 PF13408 Recombinase zinc beta ribbon domain ASM33_RS00335 PF07508 Recombinase ASM33_RS00370 PF02796 Helix-turn-helix domain of resolvase ASM33_RS00370 PF00239 Resolvase, N terminal domain ASM33_RS00405 PF02632 BioY family ASM33_RS00410 PF00881 Nitroreductase family ASM33_RS00430 PF01678 Diaminopimelate epimerase ASM33_RS00435 PF10576 Iron-sulfur binding domain of endonuclease III ASM33_RS00435 PF00730 HhH-GPD superfamily base excision DNA repair protein ASM33_RS00435 PF00633 Helix-hairpin-helix motif ASM33_RS00445 PF13520 Amino acid permease ASM33_RS00465 PF18073 Rubredoxin metal binding domain ASM33_RS00490 PF00239 Resolvase, N terminal domain ASM33_RS00490 PF07508 Recombinase ASM33_RS00490 PF13408 Recombinase zinc beta ribbon domain ASM33_RS00520 PF17482 Phage tail sheath C-terminal domain ASM33_RS00520 PF04984 Phage tail sheath protein subtilisin-like domain ASM33_RS00585 PF13091 PLD-like domain ASM33_RS00590 PF01734 Patatin-like phospholipase ASM33_RS00595 PF01555 DNA methylase ASM33_RS00645 PF07508 Recombinase ASM33_RS00645 PF00239 Resolvase, N terminal domain ASM33_RS00645 PF13408 Recombinase zinc beta ribbon domain ASM33_RS00660 PF04002 RadC-like JAB domain ASM33_RS00665 PF01381 Helix-turn-helix ASM33_RS00685 PF07508 Recombinase ASM33_RS00685 PF00239 Resolvase, N terminal domain ASM33_RS00685 PF13408 Recombinase zinc beta ribbon domain ASM33_RS00725 PF00892 EamA-like transporter family ASM33_RS00730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ASM33_RS00730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ASM33_RS00730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ASM33_RS00740 PF01212 Beta-eliminating lyase ASM33_RS00745 PF01212 Beta-eliminating lyase ASM33_RS00750 PF00005 ABC transporter ASM33_RS00750 PF00664 ABC transporter transmembrane region ASM33_RS00780 PF00665 Integrase core domain ASM33_RS00805 PF12804 MobA-like NTP transferase domain ASM33_RS00805 PF00132 Bacterial transferase hexapeptide (six repeats) ASM33_RS00805 PF14602 Hexapeptide repeat of succinyl-transferase ASM33_RS00840 PF00176 SNF2 family N-terminal domain ASM33_RS00840 PF00271 Helicase conserved C-terminal domain ASM33_RS00840 PF12419 SNF2 Helicase protein ASM33_RS00880 PF04002 RadC-like JAB domain ASM33_RS00890 PF01381 Helix-turn-helix ASM33_RS00895 PF01381 Helix-turn-helix ASM33_RS00915 PF01381 Helix-turn-helix ASM33_RS00925 PF01016 Ribosomal L27 protein ASM33_RS00930 PF00829 Ribosomal prokaryotic L21 protein ASM33_RS00940 PF01609 Transposase DDE domain ASM33_RS00955 PF02637 GatB domain ASM33_RS00955 PF02934 GatB/GatE catalytic domain ASM33_RS00970 PF00625 Guanylate kinase ASM33_RS00975 PF01258 Prokaryotic dksA/traR C4-type zinc finger ASM33_RS00985 PF05239 PRC-barrel domain ASM33_RS00985 PF01782 RimM N-terminal domain ASM33_RS00990 PF02130 Uncharacterized protein family UPF0054 ASM33_RS01005 PF01209 ubiE/COQ5 methyltransferase family ASM33_RS01010 PF00317 Ribonucleotide reductase, all-alpha domain ASM33_RS01010 PF02867 Ribonucleotide reductase, barrel domain ASM33_RS01010 PF03477 ATP cone domain ASM33_RS01020 PF01617 Surface antigen ASM33_RS01035 PF03652 Holliday junction resolvase ASM33_RS01040 PF03989 DNA gyrase C-terminal domain, beta-propeller ASM33_RS01040 PF00521 DNA gyrase/topoisomerase IV, subunit A ASM33_RS01045 PF00355 Rieske [2Fe-2S] domain ASM33_RS01045 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ASM33_RS01050 PF00005 ABC transporter ASM33_RS01055 PF02405 Permease MlaE ASM33_RS01060 PF02686 Glu-tRNAGln amidotransferase C subunit ASM33_RS01065 PF14572 Phosphoribosyl synthetase-associated domain ASM33_RS01065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ASM33_RS01070 PF10609 NUBPL iron-transfer P-loop NTPase ASM33_RS01085 PF03448 MgtE intracellular N domain ASM33_RS01085 PF01769 Divalent cation transporter ASM33_RS01085 PF00571 CBS domain ASM33_RS01095 PF07497 Rho termination factor, RNA-binding domain ASM33_RS01095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASM33_RS01095 PF07498 Rho termination factor, N-terminal domain ASM33_RS01100 PF01235 Sodium:alanine symporter family ASM33_RS01105 PF01235 Sodium:alanine symporter family ASM33_RS01115 PF02660 Glycerol-3-phosphate acyltransferase ASM33_RS01125 PF01545 Cation efflux family ASM33_RS01135 PF04002 RadC-like JAB domain ASM33_RS01145 PF01609 Transposase DDE domain ASM33_RS01155 PF00665 Integrase core domain ASM33_RS01165 PF01513 ATP-NAD kinase ASM33_RS01170 PF01197 Ribosomal protein L31 ASM33_RS01175 PF00698 Acyl transferase domain ASM33_RS01180 PF01676 Metalloenzyme superfamily ASM33_RS01180 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ASM33_RS01225 PF02646 RmuC family ASM33_RS01250 PF13685 Iron-containing alcohol dehydrogenase ASM33_RS01265 PF00665 Integrase core domain ASM33_RS01270 PF01522 Polysaccharide deacetylase ASM33_RS01275 PF03717 Penicillin-binding Protein dimerisation domain ASM33_RS01275 PF00905 Penicillin binding protein transpeptidase domain ASM33_RS01285 PF00665 Integrase core domain ASM33_RS01290 PF03109 ABC1 family ASM33_RS01295 PF00005 ABC transporter ASM33_RS01300 PF01297 Zinc-uptake complex component A periplasmic ASM33_RS01320 PF01578 Cytochrome C assembly protein ASM33_RS01325 PF02534 Type IV secretory system Conjugative DNA transfer ASM33_RS01330 PF00437 Type II/IV secretion system protein ASM33_RS01345 PF04335 VirB8 protein ASM33_RS01350 PF00925 GTP cyclohydrolase II ASM33_RS01385 PF00665 Integrase core domain ASM33_RS01400 PF01812 5-formyltetrahydrofolate cyclo-ligase family ASM33_RS01405 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASM33_RS01420 PF03799 Cell division protein FtsQ ASM33_RS01420 PF08478 POTRA domain, FtsQ-type ASM33_RS01425 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ASM33_RS01435 PF00380 Ribosomal protein S9/S16 ASM33_RS01440 PF00572 Ribosomal protein L13 ASM33_RS01455 PF01728 FtsJ-like methyltransferase ASM33_RS01495 PF07650 KH domain ASM33_RS01495 PF01926 50S ribosome-binding GTPase ASM33_RS01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASM33_RS01515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASM33_RS01525 PF03033 Glycosyltransferase family 28 N-terminal domain ASM33_RS01525 PF04101 Glycosyltransferase family 28 C-terminal domain ASM33_RS01530 PF01609 Transposase DDE domain ASM33_RS01540 PF00925 GTP cyclohydrolase II ASM33_RS01540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ASM33_RS01545 PF01272 Transcription elongation factor, GreA/GreB, C-term ASM33_RS01545 PF03449 Transcription elongation factor, N-terminal ASM33_RS01550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASM33_RS01550 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASM33_RS01550 PF00306 ATP synthase alpha/beta chain, C terminal domain ASM33_RS01555 PF00213 ATP synthase delta (OSCP) subunit ASM33_RS01560 PF02021 Uncharacterised protein family UPF0102 ASM33_RS01565 PF01196 Ribosomal protein L17 ASM33_RS01570 PF01000 RNA polymerase Rpb3/RpoA insert domain ASM33_RS01570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ASM33_RS01570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ASM33_RS01575 PF00411 Ribosomal protein S11 ASM33_RS01580 PF00416 Ribosomal protein S13/S18 ASM33_RS01590 PF00344 SecY translocase ASM33_RS01595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ASM33_RS01600 PF03719 Ribosomal protein S5, C-terminal domain ASM33_RS01600 PF00333 Ribosomal protein S5, N-terminal domain ASM33_RS01605 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ASM33_RS01610 PF00347 Ribosomal protein L6 ASM33_RS01615 PF00410 Ribosomal protein S8 ASM33_RS01620 PF00253 Ribosomal protein S14p/S29e ASM33_RS01625 PF00281 Ribosomal protein L5 ASM33_RS01625 PF00673 ribosomal L5P family C-terminus ASM33_RS01630 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ASM33_RS01635 PF00238 Ribosomal protein L14p/L23e ASM33_RS01640 PF00366 Ribosomal protein S17 ASM33_RS01645 PF00831 Ribosomal L29 protein ASM33_RS01650 PF00252 Ribosomal protein L16p/L10e ASM33_RS01655 PF00189 Ribosomal protein S3, C-terminal domain ASM33_RS01655 PF07650 KH domain ASM33_RS01660 PF00237 Ribosomal protein L22p/L17e ASM33_RS01665 PF00203 Ribosomal protein S19 ASM33_RS01670 PF03947 Ribosomal Proteins L2, C-terminal domain ASM33_RS01670 PF00181 Ribosomal Proteins L2, RNA binding domain ASM33_RS01675 PF00276 Ribosomal protein L23 ASM33_RS01680 PF00573 Ribosomal protein L4/L1 family ASM33_RS01685 PF00297 Ribosomal protein L3 ASM33_RS01690 PF00338 Ribosomal protein S10p/S20e ASM33_RS01695 PF00009 Elongation factor Tu GTP binding domain ASM33_RS01695 PF03144 Elongation factor Tu domain 2 ASM33_RS01695 PF03143 Elongation factor Tu C-terminal domain ASM33_RS01710 PF00117 Glutamine amidotransferase class-I ASM33_RS01710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ASM33_RS01725 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASM33_RS01735 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ASM33_RS01740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASM33_RS01740 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASM33_RS01745 PF00528 Binding-protein-dependent transport system inner membrane component ASM33_RS01750 PF00468 Ribosomal protein L34 ASM33_RS01755 PF00825 Ribonuclease P ASM33_RS01770 PF00118 TCP-1/cpn60 chaperonin family ASM33_RS01775 PF00166 Chaperonin 10 Kd subunit ASM33_RS01780 PF01571 Aminomethyltransferase folate-binding domain ASM33_RS01785 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ASM33_RS01785 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ASM33_RS01785 PF13288 DXP reductoisomerase C-terminal domain ASM33_RS01805 PF00072 Response regulator receiver domain ASM33_RS01805 PF13188 PAS domain ASM33_RS01805 PF08448 PAS fold ASM33_RS01805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASM33_RS01805 PF00512 His Kinase A (phospho-acceptor) domain ASM33_RS01830 PF01218 Coproporphyrinogen III oxidase ASM33_RS01835 PF00085 Thioredoxin ASM33_RS01855 PF03741 Integral membrane protein TerC family ASM33_RS01860 PF02390 Putative methyltransferase ASM33_RS01865 PF00575 S1 RNA binding domain ASM33_RS01870 PF00216 Bacterial DNA-binding protein ASM33_RS01890 PF02163 Peptidase family M50 ASM33_RS01890 PF17820 PDZ domain ASM33_RS01895 PF07244 Surface antigen variable number repeat ASM33_RS01895 PF01103 Surface antigen ASM33_RS01905 PF07977 FabA-like domain ASM33_RS01915 PF00155 Aminotransferase class I and II ASM33_RS01930 PF00183 Hsp90 protein ASM33_RS01935 PF02542 YgbB family ASM33_RS01935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ASM33_RS01940 PF02881 SRP54-type protein, helical bundle domain ASM33_RS01940 PF00448 SRP54-type protein, GTPase domain ASM33_RS01950 PF18140 Propionyl-coenzyme A carboxylase BT domain ASM33_RS01950 PF00289 Biotin carboxylase, N-terminal domain ASM33_RS01950 PF02785 Biotin carboxylase C-terminal domain ASM33_RS01950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASM33_RS01950 PF00364 Biotin-requiring enzyme ASM33_RS01995 PF01609 Transposase DDE domain ASM33_RS02030 PF00578 AhpC/TSA family ASM33_RS02035 PF06480 FtsH Extracellular ASM33_RS02035 PF01434 Peptidase family M41 ASM33_RS02035 PF17862 AAA+ lid domain ASM33_RS02035 PF00004 ATPase family associated with various cellular activities (AAA) ASM33_RS02040 PF17768 RecJ OB domain ASM33_RS02040 PF02272 DHHA1 domain ASM33_RS02040 PF01368 DHH family ASM33_RS02055 PF01609 Transposase DDE domain ASM33_RS02070 PF01040 UbiA prenyltransferase family ASM33_RS02075 PF00115 Cytochrome C and Quinol oxidase polypeptide I ASM33_RS02080 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ASM33_RS02080 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ASM33_RS02100 PF01556 DnaJ C terminal domain ASM33_RS02100 PF00684 DnaJ central domain ASM33_RS02100 PF00226 DnaJ domain ASM33_RS02105 PF01609 Transposase DDE domain ASM33_RS02110 PF04983 RNA polymerase Rpb1, domain 3 ASM33_RS02110 PF00623 RNA polymerase Rpb1, domain 2 ASM33_RS02110 PF04997 RNA polymerase Rpb1, domain 1 ASM33_RS02110 PF05000 RNA polymerase Rpb1, domain 4 ASM33_RS02110 PF04561 RNA polymerase Rpb2, domain 2 ASM33_RS02110 PF04563 RNA polymerase beta subunit ASM33_RS02110 PF04565 RNA polymerase Rpb2, domain 3 ASM33_RS02110 PF10385 RNA polymerase beta subunit external 1 domain ASM33_RS02110 PF00562 RNA polymerase Rpb2, domain 6 ASM33_RS02110 PF04560 RNA polymerase Rpb2, domain 7 ASM33_RS02110 PF04998 RNA polymerase Rpb1, domain 5 ASM33_RS02115 PF16320 Ribosomal protein L7/L12 dimerisation domain ASM33_RS02115 PF00542 Ribosomal protein L7/L12 C-terminal domain ASM33_RS02120 PF00466 Ribosomal protein L10 ASM33_RS02125 PF00687 Ribosomal protein L1p/L10e family ASM33_RS02130 PF00298 Ribosomal protein L11, RNA binding domain ASM33_RS02130 PF03946 Ribosomal protein L11, N-terminal domain ASM33_RS02135 PF00467 KOW motif ASM33_RS02135 PF02357 Transcription termination factor nusG ASM33_RS02150 PF03143 Elongation factor Tu C-terminal domain ASM33_RS02150 PF03144 Elongation factor Tu domain 2 ASM33_RS02150 PF00009 Elongation factor Tu GTP binding domain ASM33_RS02155 PF00009 Elongation factor Tu GTP binding domain ASM33_RS02155 PF03764 Elongation factor G, domain IV ASM33_RS02155 PF14492 Elongation Factor G, domain II ASM33_RS02155 PF00679 Elongation factor G C-terminus ASM33_RS02155 PF03144 Elongation factor Tu domain 2 ASM33_RS02160 PF00177 Ribosomal protein S7p/S5e ASM33_RS02165 PF00164 Ribosomal protein S12/S23 ASM33_RS02175 PF01235 Sodium:alanine symporter family ASM33_RS02190 PF02511 Thymidylate synthase complementing protein ASM33_RS02195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASM33_RS02200 PF01494 FAD binding domain ASM33_RS02205 PF01292 Prokaryotic cytochrome b561 ASM33_RS02210 PF03060 Nitronate monooxygenase ASM33_RS02225 PF00471 Ribosomal protein L33 ASM33_RS02230 PF12111 Polyribonucleotide phosphorylase C terminal ASM33_RS02230 PF00575 S1 RNA binding domain ASM33_RS02230 PF10150 Ribonuclease E/G family ASM33_RS02240 PF00533 BRCA1 C Terminus (BRCT) domain ASM33_RS02240 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ASM33_RS02240 PF12826 Helix-hairpin-helix motif ASM33_RS02240 PF03120 NAD-dependent DNA ligase OB-fold domain ASM33_RS02240 PF01653 NAD-dependent DNA ligase adenylation domain ASM33_RS02245 PF12796 Ankyrin repeats (3 copies) ASM33_RS02255 PF02545 Maf-like protein ASM33_RS02260 PF01176 Translation initiation factor 1A / IF-1 ASM33_RS02275 PF03099 Biotin/lipoate A/B protein ligase family ASM33_RS02290 PF00436 Single-strand binding protein family ASM33_RS02295 PF02502 Ribose/Galactose Isomerase ASM33_RS02300 PF08241 Methyltransferase domain ASM33_RS02310 PF00586 AIR synthase related protein, N-terminal domain ASM33_RS02310 PF02769 AIR synthase related protein, C-terminal domain ASM33_RS02310 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ASM33_RS02330 PF02881 SRP54-type protein, helical bundle domain ASM33_RS02330 PF02978 Signal peptide binding domain ASM33_RS02330 PF00448 SRP54-type protein, GTPase domain ASM33_RS02335 PF01121 Dephospho-CoA kinase ASM33_RS02340 PF01171 PP-loop family ASM33_RS02345 PF00691 OmpA family ASM33_RS02365 PF00005 ABC transporter ASM33_RS02370 PF01521 Iron-sulphur cluster biosynthesis ASM33_RS02375 PF13286 Phosphohydrolase-associated domain ASM33_RS02375 PF01966 HD domain ASM33_RS02380 PF01872 RibD C-terminal domain ASM33_RS02380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASM33_RS02385 PF01609 Transposase DDE domain ASM33_RS02395 PF01131 DNA topoisomerase ASM33_RS02395 PF01751 Toprim domain ASM33_RS02395 PF01396 Topoisomerase DNA binding C4 zinc finger ASM33_RS02395 PF13368 Topoisomerase C-terminal repeat ASM33_RS02405 PF11638 DnaA N-terminal domain ASM33_RS02405 PF00308 Bacterial dnaA protein ASM33_RS02405 PF08299 Bacterial dnaA protein helix-turn-helix ASM33_RS02410 PF00120 Glutamine synthetase, catalytic domain ASM33_RS02415 PF02699 Preprotein translocase subunit ASM33_RS02420 PF01380 SIS domain ASM33_RS02425 PF00665 Integrase core domain ASM33_RS02430 PF00202 Aminotransferase class-III ASM33_RS02435 PF00989 PAS fold ASM33_RS02435 PF00512 His Kinase A (phospho-acceptor) domain ASM33_RS02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASM33_RS02455 PF00348 Polyprenyl synthetase ASM33_RS02460 PF00550 Phosphopantetheine attachment site ASM33_RS02465 PF00109 Beta-ketoacyl synthase, N-terminal domain ASM33_RS02465 PF02801 Beta-ketoacyl synthase, C-terminal domain ASM33_RS02475 PF01523 Putative modulator of DNA gyrase ASM33_RS02510 PF00665 Integrase core domain ASM33_RS02530 PF02355 Protein export membrane protein ASM33_RS02550 PF03900 Porphobilinogen deaminase, C-terminal domain ASM33_RS02550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ASM33_RS02555 PF01565 FAD binding domain ASM33_RS02555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ASM33_RS02565 PF13411 MerR HTH family regulatory protein ASM33_RS02570 PF00216 Bacterial DNA-binding protein ASM33_RS02585 PF02938 GAD domain ASM33_RS02585 PF00152 tRNA synthetases class II (D, K and N) ASM33_RS02585 PF01336 OB-fold nucleic acid binding domain ASM33_RS02590 PF00665 Integrase core domain ASM33_RS02620 PF01668 SmpB protein ASM33_RS02630 PF01790 Prolipoprotein diacylglyceryl transferase ASM33_RS02640 PF00171 Aldehyde dehydrogenase family ASM33_RS02640 PF01619 Proline dehydrogenase ASM33_RS02640 PF14850 DNA-binding domain of Proline dehydrogenase ASM33_RS02640 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ASM33_RS02650 PF00132 Bacterial transferase hexapeptide (six repeats) ASM33_RS02650 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ASM33_RS02650 PF14602 Hexapeptide repeat of succinyl-transferase ASM33_RS02665 PF00664 ABC transporter transmembrane region ASM33_RS02665 PF00005 ABC transporter ASM33_RS02680 PF00375 Sodium:dicarboxylate symporter family ASM33_RS02685 PF00156 Phosphoribosyl transferase domain ASM33_RS02690 PF01098 Cell cycle protein ASM33_RS02695 PF01209 ubiE/COQ5 methyltransferase family ASM33_RS02700 PF01259 SAICAR synthetase ASM33_RS02705 PF01746 tRNA (Guanine-1)-methyltransferase ASM33_RS02710 PF01245 Ribosomal protein L19 ASM33_RS02720 PF00528 Binding-protein-dependent transport system inner membrane component ASM33_RS02745 PF02016 LD-carboxypeptidase N-terminal domain ASM33_RS02745 PF17676 LD-carboxypeptidase C-terminal domain ASM33_RS02755 PF02091 Glycyl-tRNA synthetase alpha subunit ASM33_RS02760 PF05746 DALR anticodon binding domain ASM33_RS02760 PF02092 Glycyl-tRNA synthetase beta subunit ASM33_RS02765 PF08459 UvrC Helix-hairpin-helix N-terminal ASM33_RS02765 PF02151 UvrB/uvrC motif ASM33_RS02765 PF01541 GIY-YIG catalytic domain ASM33_RS02785 PF00665 Integrase core domain ASM33_RS02800 PF11412 Disulphide bond corrector protein DsbC ASM33_RS02800 PF13098 Thioredoxin-like domain ASM33_RS02800 PF02683 Cytochrome C biogenesis protein transmembrane region ASM33_RS02810 PF01609 Transposase DDE domain ASM33_RS02815 PF01425 Amidase ASM33_RS02825 PF07690 Major Facilitator Superfamily ASM33_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component ASM33_RS02850 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASM33_RS02855 PF00849 RNA pseudouridylate synthase ASM33_RS02875 PF01208 Uroporphyrinogen decarboxylase (URO-D) ASM33_RS02880 PF00571 CBS domain ASM33_RS02880 PF03471 Transporter associated domain ASM33_RS02885 PF00398 Ribosomal RNA adenine dimethylase ASM33_RS02895 PF00551 Formyl transferase ASM33_RS02905 PF02463 RecF/RecN/SMC N terminal domain ASM33_RS02915 PF08245 Mur ligase middle domain ASM33_RS02915 PF02875 Mur ligase family, glutamate ligase domain ASM33_RS02925 PF02245 Methylpurine-DNA glycosylase (MPG) ASM33_RS02935 PF00462 Glutaredoxin ASM33_RS02940 PF06574 FAD synthetase ASM33_RS02940 PF01687 Riboflavin kinase ASM33_RS02945 PF01252 Signal peptidase (SPase) II ASM33_RS02950 PF05193 Peptidase M16 inactive domain ASM33_RS02950 PF00675 Insulinase (Peptidase family M16) ASM33_RS02960 PF07676 WD40-like Beta Propeller Repeat ASM33_RS02960 PF04052 TolB amino-terminal domain ASM33_RS02965 PF12706 Beta-lactamase superfamily domain ASM33_RS02965 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ASM33_RS02965 PF17770 Ribonuclease J C-terminal domain ASM33_RS02975 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ASM33_RS02980 PF00266 Aminotransferase class-V ASM33_RS02995 PF08032 RNA 2'-O ribose methyltransferase substrate binding ASM33_RS02995 PF00588 SpoU rRNA Methylase family ASM33_RS03000 PF01027 Inhibitor of apoptosis-promoting Bax1 ASM33_RS03005 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ASM33_RS03010 PF03471 Transporter associated domain ASM33_RS03010 PF00571 CBS domain ASM33_RS03010 PF01595 Cyclin M transmembrane N-terminal domain ASM33_RS03015 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) ASM33_RS03020 PF02441 Flavoprotein ASM33_RS03025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ASM33_RS03025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ASM33_RS03055 PF00004 ATPase family associated with various cellular activities (AAA) ASM33_RS03055 PF05362 Lon protease (S16) C-terminal proteolytic domain ASM33_RS03055 PF02190 ATP-dependent protease La (LON) substrate-binding domain ASM33_RS03060 PF07724 AAA domain (Cdc48 subfamily) ASM33_RS03060 PF10431 C-terminal, D2-small domain, of ClpB protein ASM33_RS03060 PF06689 ClpX C4-type zinc finger ASM33_RS03065 PF00574 Clp protease ASM33_RS03070 PF05697 Bacterial trigger factor protein (TF) ASM33_RS03070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASM33_RS03070 PF05698 Bacterial trigger factor protein (TF) C-terminus ASM33_RS03080 PF04972 BON domain ASM33_RS03085 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ASM33_RS03085 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ASM33_RS03100 PF07690 Major Facilitator Superfamily ASM33_RS03100 PF00083 Sugar (and other) transporter ASM33_RS03120 PF03023 Lipid II flippase MurJ ASM33_RS03125 PF00155 Aminotransferase class I and II ASM33_RS03130 PF01609 Transposase DDE domain ASM33_RS03145 PF08264 Anticodon-binding domain of tRNA ASM33_RS03145 PF09334 tRNA synthetases class I (M) ASM33_RS03150 PF00665 Integrase core domain ASM33_RS03155 PF05188 MutS domain II ASM33_RS03155 PF00488 MutS domain V ASM33_RS03155 PF05190 MutS family domain IV ASM33_RS03155 PF01624 MutS domain I ASM33_RS03155 PF05192 MutS domain III ASM33_RS03170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASM33_RS03170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ASM33_RS03170 PF02142 MGS-like domain ASM33_RS03175 PF00665 Integrase core domain ASM33_RS03185 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ASM33_RS03195 PF00156 Phosphoribosyl transferase domain ASM33_RS03210 PF01053 Cys/Met metabolism PLP-dependent enzyme ASM33_RS03215 PF01722 BolA-like protein ASM33_RS03220 PF00012 Hsp70 protein ASM33_RS03235 PF01043 SecA preprotein cross-linking domain ASM33_RS03235 PF07517 SecA DEAD-like domain ASM33_RS03235 PF07516 SecA Wing and Scaffold domain ASM33_RS03235 PF02810 SEC-C motif ASM33_RS03250 PF00958 GMP synthase C terminal domain ASM33_RS03250 PF02540 NAD synthase ASM33_RS03250 PF00117 Glutamine amidotransferase class-I ASM33_RS03285 PF13145 PPIC-type PPIASE domain ASM33_RS03290 PF00701 Dihydrodipicolinate synthetase family ASM33_RS03295 PF12796 Ankyrin repeats (3 copies) ASM33_RS03310 PF00210 Ferritin-like domain ASM33_RS03345 PF02767 DNA polymerase III beta subunit, central domain ASM33_RS03345 PF00712 DNA polymerase III beta subunit, N-terminal domain ASM33_RS03345 PF02768 DNA polymerase III beta subunit, C-terminal domain ASM33_RS03365 PF01416 tRNA pseudouridine synthase ASM33_RS03370 PF12838 4Fe-4S dicluster domain ASM33_RS03380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASM33_RS03380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASM33_RS03380 PF03129 Anticodon binding domain ASM33_RS03385 PF00707 Translation initiation factor IF-3, C-terminal domain ASM33_RS03385 PF05198 Translation initiation factor IF-3, N-terminal domain ASM33_RS03415 PF01596 O-methyltransferase ASM33_RS03435 PF12169 DNA polymerase III subunits gamma and tau domain III ASM33_RS03440 PF02575 YbaB/EbfC DNA-binding family ASM33_RS03445 PF01381 Helix-turn-helix ASM33_RS03455 PF02875 Mur ligase family, glutamate ligase domain ASM33_RS03455 PF01225 Mur ligase family, catalytic domain ASM33_RS03455 PF08245 Mur ligase middle domain ASM33_RS03465 PF00692 dUTPase ASM33_RS03470 PF00665 Integrase core domain ASM33_RS03475 PF17864 RuvB AAA lid domain ASM33_RS03475 PF05491 RuvB C-terminal winged helix domain ASM33_RS03475 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASM33_RS03480 PF07499 RuvA, C-terminal domain ASM33_RS03480 PF01330 RuvA N terminal domain ASM33_RS03495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ASM33_RS03500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ASM33_RS03510 PF02272 DHHA1 domain ASM33_RS03510 PF01411 tRNA synthetases class II (A) ASM33_RS03510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASM33_RS03520 PF02565 Recombination protein O C terminal ASM33_RS03520 PF11967 Recombination protein O N terminal ASM33_RS03535 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ASM33_RS03535 PF01578 Cytochrome C assembly protein ASM33_RS03545 PF13662 Toprim domain ASM33_RS03545 PF02132 RecR protein ASM33_RS03555 PF00719 Inorganic pyrophosphatase ASM33_RS03570 PF01098 Cell cycle protein ASM33_RS03590 PF02896 PEP-utilising enzyme, TIM barrel domain ASM33_RS03590 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ASM33_RS03590 PF00391 PEP-utilising enzyme, mobile domain ASM33_RS03600 PF00665 Integrase core domain ASM33_RS03625 PF00005 ABC transporter ASM33_RS03635 PF00293 NUDIX domain ASM33_RS03640 PF01026 TatD related DNase ASM33_RS03645 PF01609 Transposase DDE domain ASM33_RS03660 PF01409 tRNA synthetases class II core domain (F) ASM33_RS03660 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ASM33_RS03665 PF00132 Bacterial transferase hexapeptide (six repeats) ASM33_RS03665 PF14602 Hexapeptide repeat of succinyl-transferase ASM33_RS03665 PF12804 MobA-like NTP transferase domain ASM33_RS03695 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ASM33_RS03710 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ASM33_RS03715 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ASM33_RS03725 PF01921 tRNA synthetases class I (K) ASM33_RS03735 PF10502 Signal peptidase, peptidase S26 ASM33_RS03740 PF00893 Small Multidrug Resistance protein ASM33_RS03745 PF00893 Small Multidrug Resistance protein ASM33_RS03750 PF00684 DnaJ central domain ASM33_RS03750 PF01556 DnaJ C terminal domain ASM33_RS03750 PF00226 DnaJ domain ASM33_RS03760 PF00570 HRDC domain ASM33_RS03760 PF01612 3'-5' exonuclease ASM33_RS03765 PF00490 Delta-aminolevulinic acid dehydratase ASM33_RS03775 PF00146 NADH dehydrogenase ASM33_RS03785 PF00384 Molybdopterin oxidoreductase ASM33_RS03785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ASM33_RS03785 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ASM33_RS03815 PF02254 TrkA-N domain ASM33_RS03815 PF00999 Sodium/hydrogen exchanger family ASM33_RS03825 PF02223 Thymidylate kinase ASM33_RS03830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ASM33_RS03830 PF02843 Phosphoribosylglycinamide synthetase, C domain ASM33_RS03830 PF02844 Phosphoribosylglycinamide synthetase, N domain ASM33_RS03835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASM33_RS03835 PF02403 Seryl-tRNA synthetase N-terminal domain ASM33_RS03845 PF01207 Dihydrouridine synthase (Dus) ASM33_RS03850 PF02167 Cytochrome C1 family ASM33_RS03855 PF00032 Cytochrome b(C-terminal)/b6/petD ASM33_RS03855 PF00033 Cytochrome b/b6/petB ASM33_RS03860 PF17757 UvrB interaction domain ASM33_RS03860 PF04851 Type III restriction enzyme, res subunit ASM33_RS03860 PF00271 Helicase conserved C-terminal domain ASM33_RS03860 PF02151 UvrB/uvrC motif ASM33_RS03860 PF12344 Ultra-violet resistance protein B ASM33_RS03880 PF12705 PD-(D/E)XK nuclease superfamily ASM33_RS03880 PF13361 UvrD-like helicase C-terminal domain ASM33_RS03880 PF00580 UvrD/REP helicase N-terminal domain ASM33_RS03885 PF08544 GHMP kinases C terminal ASM33_RS03885 PF00288 GHMP kinases N terminal domain ASM33_RS03895 PF00950 ABC 3 transport family ASM33_RS03910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ASM33_RS03910 PF00361 Proton-conducting membrane transporter ASM33_RS03910 PF13244 Domain of unknown function (DUF4040) ASM33_RS03915 PF01219 Prokaryotic diacylglycerol kinase ASM33_RS03930 PF00364 Biotin-requiring enzyme ASM33_RS03930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASM33_RS03930 PF02817 e3 binding domain ASM33_RS03950 PF01709 Transcriptional regulator ASM33_RS03970 PF00830 Ribosomal L28 family ASM33_RS03975 PF04055 Radical SAM superfamily ASM33_RS03975 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ASM33_RS03985 PF00035 Double-stranded RNA binding motif ASM33_RS03985 PF14622 Ribonuclease-III-like ASM33_RS03990 PF00953 Glycosyl transferase family 4 ASM33_RS03995 PF01351 Ribonuclease HII ASM33_RS04015 PF00464 Serine hydroxymethyltransferase ASM33_RS04030 PF13361 UvrD-like helicase C-terminal domain ASM33_RS04030 PF00580 UvrD/REP helicase N-terminal domain ASM33_RS04040 PF00390 Malic enzyme, N-terminal domain ASM33_RS04040 PF01515 Phosphate acetyl/butaryl transferase ASM33_RS04040 PF03949 Malic enzyme, NAD binding domain ASM33_RS04045 PF01066 CDP-alcohol phosphatidyltransferase ASM33_RS04060 PF13525 Outer membrane lipoprotein ASM33_RS04065 PF13085 2Fe-2S iron-sulfur cluster binding domain ASM33_RS04080 PF04608 Phosphatidylglycerophosphatase A ASM33_RS04100 PF00072 Response regulator receiver domain ASM33_RS04100 PF00486 Transcriptional regulatory protein, C terminal ASM33_RS04110 PF14693 Ribosomal protein TL5, C-terminal domain ASM33_RS04110 PF01386 Ribosomal L25p family ASM33_RS04115 PF01195 Peptidyl-tRNA hydrolase ASM33_RS04135 PF01180 Dihydroorotate dehydrogenase ASM33_RS04150 PF02910 Fumarate reductase flavoprotein C-term ASM33_RS04150 PF00890 FAD binding domain ASM33_RS04160 PF04452 RNA methyltransferase ASM33_RS04165 PF00834 Ribulose-phosphate 3 epimerase family ASM33_RS04175 PF00462 Glutaredoxin ASM33_RS04185 PF00285 Citrate synthase, C-terminal domain ASM33_RS04190 PF01649 Ribosomal protein S20 ASM33_RS04205 PF07690 Major Facilitator Superfamily ASM33_RS04225 PF01467 Cytidylyltransferase-like ASM33_RS04240 PF01255 Putative undecaprenyl diphosphate synthase ASM33_RS04255 PF01765 Ribosome recycling factor ASM33_RS04260 PF00696 Amino acid kinase family ASM33_RS04265 PF00889 Elongation factor TS ASM33_RS04270 PF00318 Ribosomal protein S2 ASM33_RS04285 PF00510 Cytochrome c oxidase subunit III ASM33_RS04290 PF02075 Crossover junction endodeoxyribonuclease RuvC ASM33_RS04295 PF08338 Domain of unknown function (DUF1731) ASM33_RS04295 PF01370 NAD dependent epimerase/dehydratase family ASM33_RS04305 PF07549 SecD/SecF GG Motif ASM33_RS04305 PF02355 Protein export membrane protein ASM33_RS04310 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASM33_RS04310 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASM33_RS04325 PF12327 FtsZ family, C-terminal domain ASM33_RS04325 PF00091 Tubulin/FtsZ family, GTPase domain ASM33_RS04340 PF01609 Transposase DDE domain ASM33_RS04360 PF12221 Bacterial membrane protein N terminal ASM33_RS04360 PF01145 SPFH domain / Band 7 family ASM33_RS04370 PF13180 PDZ domain ASM33_RS04390 PF00814 Glycoprotease family ASM33_RS04395 PF09334 tRNA synthetases class I (M) ASM33_RS04395 PF13603 Leucyl-tRNA synthetase, Domain 2 ASM33_RS04395 PF08264 Anticodon-binding domain of tRNA ASM33_RS04395 PF00133 tRNA synthetases class I (I, L, M and V) ASM33_RS04400 PF01551 Peptidase family M23 ASM33_RS04405 PF04539 Sigma-70 region 3 ASM33_RS04405 PF04542 Sigma-70 region 2 ASM33_RS04405 PF00140 Sigma-70 factor, region 1.2 ASM33_RS04405 PF04545 Sigma-70, region 4 ASM33_RS04405 PF04546 Sigma-70, non-essential region ASM33_RS04405 PF03979 Sigma-70 factor, region 1.1 ASM33_RS04410 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ASM33_RS04425 PF03334 Na+/H+ antiporter subunit ASM33_RS04435 PF01192 RNA polymerase Rpb6 ASM33_RS04445 PF00731 AIR carboxylase ASM33_RS04450 PF01119 DNA mismatch repair protein, C-terminal domain ASM33_RS04450 PF08676 MutL C terminal dimerisation domain ASM33_RS04460 PF02875 Mur ligase family, glutamate ligase domain ASM33_RS04460 PF08245 Mur ligase middle domain ASM33_RS04460 PF01225 Mur ligase family, catalytic domain ASM33_RS04465 PF03330 Lytic transglycolase ASM33_RS04480 PF00665 Integrase core domain ASM33_RS04485 PF03918 Cytochrome C biogenesis protein ASM33_RS04495 PF00111 2Fe-2S iron-sulfur cluster binding domain ASM33_RS04500 PF08245 Mur ligase middle domain ASM33_RS04515 PF00677 Lumazine binding domain ASM33_RS04530 PF03070 TENA/THI-4/PQQC family ASM33_RS04535 PF02772 S-adenosylmethionine synthetase, central domain ASM33_RS04535 PF02773 S-adenosylmethionine synthetase, C-terminal domain ASM33_RS04535 PF00438 S-adenosylmethionine synthetase, N-terminal domain ASM33_RS04545 PF00034 Cytochrome c ASM33_RS04555 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASM33_RS04575 PF00334 Nucleoside diphosphate kinase ASM33_RS04585 PF00762 Ferrochelatase ASM33_RS04600 PF01039 Carboxyl transferase domain ASM33_RS04605 PF01783 Ribosomal L32p protein family ASM33_RS04610 PF02504 Fatty acid synthesis protein ASM33_RS04615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASM33_RS04615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASM33_RS04625 PF00106 short chain dehydrogenase ASM33_RS04630 PF03631 Virulence factor BrkB ASM33_RS04635 PF02142 MGS-like domain ASM33_RS04635 PF01808 AICARFT/IMPCHase bienzyme ASM33_RS04640 PF01113 Dihydrodipicolinate reductase, N-terminus ASM33_RS04640 PF05173 Dihydrodipicolinate reductase, C-terminus ASM33_RS04645 PF00005 ABC transporter ASM33_RS04650 PF00665 Integrase core domain ASM33_RS04655 PF01609 Transposase DDE domain ASM33_RS04670 PF00012 Hsp70 protein ASM33_RS04675 PF07743 HSCB C-terminal oligomerisation domain ASM33_RS04680 PF01521 Iron-sulphur cluster biosynthesis ASM33_RS04685 PF01592 NifU-like N terminal domain ASM33_RS04695 PF14579 Helix-hairpin-helix motif ASM33_RS04695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASM33_RS04695 PF02811 PHP domain ASM33_RS04695 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASM33_RS04700 PF01250 Ribosomal protein S6 ASM33_RS04705 PF01084 Ribosomal protein S18 ASM33_RS04710 PF01281 Ribosomal protein L9, N-terminal domain ASM33_RS04710 PF03948 Ribosomal protein L9, C-terminal domain ASM33_RS04715 PF10397 Adenylosuccinate lyase C-terminus ASM33_RS04715 PF00206 Lyase ASM33_RS04730 PF04551 GcpE protein ASM33_RS04740 PF17760 UvrA interaction domain ASM33_RS04740 PF17755 UvrA DNA-binding domain ASM33_RS04745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ASM33_RS04750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ASM33_RS04755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ASM33_RS04755 PF00361 Proton-conducting membrane transporter ASM33_RS04760 PF00361 Proton-conducting membrane transporter ASM33_RS04765 PF00361 Proton-conducting membrane transporter ASM33_RS04775 PF02237 Biotin protein ligase C terminal domain ASM33_RS04775 PF03099 Biotin/lipoate A/B protein ligase family ASM33_RS04780 PF03100 CcmE ASM33_RS04815 PF11953 Domain of unknown function (DUF3470) ASM33_RS04815 PF00037 4Fe-4S binding domain ASM33_RS04820 PF02481 DNA recombination-mediator protein A ASM33_RS04820 PF17782 DprA winged helix domain ASM33_RS04825 PF00557 Metallopeptidase family M24 ASM33_RS04825 PF01321 Creatinase/Prolidase N-terminal domain ASM33_RS04835 PF00772 DnaB-like helicase N terminal domain ASM33_RS04835 PF03796 DnaB-like helicase C terminal domain ASM33_RS04860 PF01609 Transposase DDE domain ASM33_RS04870 PF00872 Transposase, Mutator family ASM33_RS04890 PF00239 Resolvase, N terminal domain ASM33_RS04890 PF02796 Helix-turn-helix domain of resolvase ASM33_RS05040 PF01348 Type II intron maturase ASM33_RS05040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ASM33_RS05045 PF07508 Recombinase ASM33_RS05045 PF00239 Resolvase, N terminal domain ASM33_RS05045 PF13408 Recombinase zinc beta ribbon domain ASM33_RS05115 PF04984 Phage tail sheath protein subtilisin-like domain ASM33_RS05115 PF17482 Phage tail sheath C-terminal domain ASM33_RS05160 PF01734 Patatin-like phospholipase ASM33_RS05180 PF03120 NAD-dependent DNA ligase OB-fold domain ASM33_RS05180 PF00533 BRCA1 C Terminus (BRCT) domain ASM33_RS05180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ASM33_RS05180 PF12826 Helix-hairpin-helix motif ASM33_RS05180 PF01653 NAD-dependent DNA ligase adenylation domain ASM33_RS05205 PF01381 Helix-turn-helix ASM33_RS05210 PF01381 Helix-turn-helix ASM33_RS05220 PF04002 RadC-like JAB domain ASM33_RS05265 PF04002 RadC-like JAB domain ASM33_RS05270 PF02371 Transposase IS116/IS110/IS902 family ASM33_RS05270 PF01548 Transposase ASM33_RS05290 PF00533 BRCA1 C Terminus (BRCT) domain ASM33_RS05290 PF03120 NAD-dependent DNA ligase OB-fold domain ASM33_RS05290 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ASM33_RS05290 PF01653 NAD-dependent DNA ligase adenylation domain ASM33_RS05290 PF12826 Helix-hairpin-helix motif ASM33_RS05310 PF01555 DNA methylase ASM33_RS05315 PF01734 Patatin-like phospholipase ASM33_RS05320 PF13091 PLD-like domain ASM33_RS05335 PF12796 Ankyrin repeats (3 copies) ASM33_RS05430 PF01609 Transposase DDE domain ASM33_RS05485 PF01555 DNA methylase ASM33_RS05485 PF18755 Restriction Enzyme Adenine Methylase Associated ASM33_RS05510 PF06250 YhcG PDDEXK nuclease domain ASM33_RS05510 PF17761 DUF1016 N-terminal domain ASM33_RS05575 PF01548 Transposase ASM33_RS05575 PF02371 Transposase IS116/IS110/IS902 family ASM33_RS05605 PF02796 Helix-turn-helix domain of resolvase ASM33_RS05605 PF00239 Resolvase, N terminal domain ASM33_RS05610 PF01381 Helix-turn-helix ASM33_RS05615 PF13784 Fic/DOC family N-terminal ASM33_RS05615 PF02661 Fic/DOC family ASM33_RS05635 PF12796 Ankyrin repeats (3 copies) ASM33_RS05660 PF04002 RadC-like JAB domain ASM33_RS05675 PF13408 Recombinase zinc beta ribbon domain ASM33_RS05675 PF00239 Resolvase, N terminal domain ASM33_RS05675 PF07508 Recombinase ASM33_RS05725 PF04984 Phage tail sheath protein subtilisin-like domain ASM33_RS05725 PF17482 Phage tail sheath C-terminal domain ASM33_RS05780 PF13091 PLD-like domain ASM33_RS05785 PF01734 Patatin-like phospholipase ASM33_RS05820 PF01029 NusB family ASM33_RS05825 PF00885 6,7-dimethyl-8-ribityllumazine synthase ASM33_RS05830 PF14849 YidC periplasmic domain ASM33_RS05830 PF02096 60Kd inner membrane protein ASM33_RS05840 PF00204 DNA gyrase B ASM33_RS05840 PF00986 DNA gyrase B subunit, carboxyl terminus ASM33_RS05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASM33_RS05840 PF01751 Toprim domain ASM33_RS05850 PF18324 Hypothetical protein TT1725 ASM33_RS05850 PF00180 Isocitrate/isopropylmalate dehydrogenase ASM33_RS05870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASM33_RS05870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASM33_RS05880 PF00579 tRNA synthetases class I (W and Y) ASM33_RS05890 PF00578 AhpC/TSA family ASM33_RS05890 PF10417 C-terminal domain of 1-Cys peroxiredoxin ASM33_RS05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASM33_RS05935 PF01702 Queuine tRNA-ribosyltransferase ASM33_RS05945 PF00873 AcrB/AcrD/AcrF family ASM33_RS05960 PF00444 Ribosomal protein L36 ASM33_RS05965 PF03618 Kinase/pyrophosphorylase ASM33_RS05970 PF01050 Mannose-6-phosphate isomerase ASM33_RS05970 PF00483 Nucleotidyl transferase ASM33_RS05980 PF01243 Pyridoxamine 5'-phosphate oxidase ASM33_RS05980 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ASM33_RS05985 PF09312 SurA N-terminal domain ASM33_RS05990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ASM33_RS05990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ASM33_RS06015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASM33_RS06025 PF01609 Transposase DDE domain ASM33_RS06040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ASM33_RS06040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ASM33_RS06040 PF10531 SLBB domain ASM33_RS06075 PF01791 DeoC/LacD family aldolase ASM33_RS06085 PF00056 lactate/malate dehydrogenase, NAD binding domain ASM33_RS06085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASM33_RS06090 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ASM33_RS06095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASM33_RS06100 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ASM33_RS06105 PF01230 HIT domain ASM33_RS06120 PF00696 Amino acid kinase family ASM33_RS06125 PF01926 50S ribosome-binding GTPase ASM33_RS06130 PF03462 PCRF domain ASM33_RS06130 PF00472 RF-1 domain ASM33_RS06140 PF00586 AIR synthase related protein, N-terminal domain ASM33_RS06140 PF02769 AIR synthase related protein, C-terminal domain ASM33_RS06175 PF00665 Integrase core domain ASM33_RS06195 PF03091 CutA1 divalent ion tolerance protein ASM33_RS06205 PF01795 MraW methylase family ASM33_RS06210 PF07690 Major Facilitator Superfamily ASM33_RS06210 PF00083 Sugar (and other) transporter ASM33_RS06215 PF07687 Peptidase dimerisation domain ASM33_RS06215 PF01546 Peptidase family M20/M25/M40 ASM33_RS06220 PF01300 Telomere recombination ASM33_RS06225 PF12169 DNA polymerase III subunits gamma and tau domain III ASM33_RS06230 PF17827 PrmC N-terminal domain ASM33_RS06230 PF05175 Methyltransferase small domain ASM33_RS06235 PF08946 Osmosensory transporter coiled coil ASM33_RS06235 PF00083 Sugar (and other) transporter ASM33_RS06240 PF01975 Survival protein SurE ASM33_RS06245 PF00679 Elongation factor G C-terminus ASM33_RS06245 PF14492 Elongation Factor G, domain II ASM33_RS06245 PF00009 Elongation factor Tu GTP binding domain ASM33_RS06245 PF06421 GTP-binding protein LepA C-terminus ASM33_RS06245 PF03144 Elongation factor Tu domain 2 ASM33_RS06255 PF00581 Rhodanese-like domain ASM33_RS06255 PF17773 UPF0176 acylphosphatase like domain ASM33_RS06260 PF03167 Uracil DNA glycosylase superfamily ASM33_RS06265 PF01327 Polypeptide deformylase ASM33_RS06270 PF02491 SHS2 domain inserted in FTSA ASM33_RS06280 PF00557 Metallopeptidase family M24 ASM33_RS06285 PF00456 Transketolase, thiamine diphosphate binding domain ASM33_RS06285 PF02779 Transketolase, pyrimidine binding domain ASM33_RS06285 PF02780 Transketolase, C-terminal domain ASM33_RS06290 PF01479 S4 domain ASM33_RS06290 PF00163 Ribosomal protein S4/S9 N-terminal domain ASM33_RS06300 PF04384 Iron-sulphur cluster assembly ASM33_RS06325 PF06071 Protein of unknown function (DUF933) ASM33_RS06325 PF01926 50S ribosome-binding GTPase ASM33_RS06350 PF04545 Sigma-70, region 4 ASM33_RS06350 PF04542 Sigma-70 region 2 ASM33_RS06350 PF00140 Sigma-70 factor, region 1.2 ASM33_RS06365 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ASM33_RS06370 PF01609 Transposase DDE domain ASM33_RS06385 PF12627 Probable RNA and SrmB- binding site of polymerase A ASM33_RS06385 PF13735 tRNA nucleotidyltransferase domain 2 putative ASM33_RS06385 PF01743 Poly A polymerase head domain ASM33_RS06400 PF00665 Integrase core domain ASM33_RS06435 PF00162 Phosphoglycerate kinase ASM33_RS06445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASM33_RS06445 PF00364 Biotin-requiring enzyme ASM33_RS06445 PF02817 e3 binding domain ASM33_RS06460 PF00571 CBS domain ASM33_RS06460 PF00478 IMP dehydrogenase / GMP reductase domain ASM33_RS06470 PF00364 Biotin-requiring enzyme ASM33_RS06470 PF02780 Transketolase, C-terminal domain ASM33_RS06470 PF02779 Transketolase, pyrimidine binding domain ASM33_RS06490 PF06055 Exopolysaccharide synthesis, ExoD ASM33_RS06495 PF09190 DALR domain ASM33_RS06495 PF01406 tRNA synthetases class I (C) catalytic domain ASM33_RS06515 PF02628 Cytochrome oxidase assembly protein ASM33_RS06535 PF00137 ATP synthase subunit C ASM33_RS06540 PF00119 ATP synthase A chain ASM33_RS06590 PF00579 tRNA synthetases class I (W and Y) ASM33_RS06605 PF01367 5'-3' exonuclease, C-terminal SAM fold ASM33_RS06605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ASM33_RS06605 PF00476 DNA polymerase family A ASM33_RS06620 PF02195 ParB-like nuclease domain ASM33_RS06620 PF17762 HTH domain found in ParB protein ASM33_RS06625 PF13614 AAA domain ASM33_RS06635 PF02230 Phospholipase/Carboxylesterase ASM33_RS06645 PF02899 Phage integrase, N-terminal SAM-like domain ASM33_RS06645 PF00589 Phage integrase family ASM33_RS06650 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASM33_RS06650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASM33_RS06670 PF00676 Dehydrogenase E1 component ASM33_RS06675 PF03653 Uncharacterised protein family (UPF0093) ASM33_RS06700 PF00886 Ribosomal protein S16 ASM33_RS06705 PF00348 Polyprenyl synthetase ASM33_RS06710 PF01025 GrpE ASM33_RS06715 PF02416 mttA/Hcf106 family ASM33_RS06725 PF01479 S4 domain ASM33_RS06725 PF00849 RNA pseudouridylate synthase ASM33_RS06765 PF00202 Aminotransferase class-III ASM33_RS06775 PF00107 Zinc-binding dehydrogenase ASM33_RS06775 PF08240 Alcohol dehydrogenase GroES-like domain ASM33_RS06780 PF00883 Cytosol aminopeptidase family, catalytic domain ASM33_RS06780 PF02789 Cytosol aminopeptidase family, N-terminal domain ASM33_RS06790 PF00665 Integrase core domain ASM33_RS06795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASM33_RS06795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASM33_RS06800 PF00902 Sec-independent protein translocase protein (TatC) ASM33_RS06805 PF08264 Anticodon-binding domain of tRNA ASM33_RS06805 PF00133 tRNA synthetases class I (I, L, M and V) ASM33_RS06820 PF06418 CTP synthase N-terminus ASM33_RS06820 PF00117 Glutamine amidotransferase class-I ASM33_RS06830 PF14437 MafB19-like deaminase ASM33_RS06835 PF13840 ACT domain ASM33_RS06835 PF01842 ACT domain ASM33_RS06835 PF00696 Amino acid kinase family ASM33_RS06840 PF00156 Phosphoribosyl transferase domain ASM33_RS06840 PF13537 Glutamine amidotransferase domain ASM33_RS06845 PF01609 Transposase DDE domain ASM33_RS06855 PF02325 YGGT family ASM33_RS06860 PF17854 FtsK alpha domain ASM33_RS06860 PF01580 FtsK/SpoIIIE family ASM33_RS06860 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ASM33_RS06860 PF09397 Ftsk gamma domain ASM33_RS06875 PF01609 Transposase DDE domain ASM33_RS06910 PF00133 tRNA synthetases class I (I, L, M and V) ASM33_RS06910 PF08264 Anticodon-binding domain of tRNA ASM33_RS06920 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ASM33_RS06940 PF01609 Transposase DDE domain ASM33_RS06985 PF07943 Penicillin-binding protein 5, C-terminal domain ASM33_RS06985 PF00768 D-alanyl-D-alanine carboxypeptidase ASM33_RS06990 PF02401 LytB protein ASM33_RS06995 PF03717 Penicillin-binding Protein dimerisation domain ASM33_RS06995 PF00905 Penicillin binding protein transpeptidase domain ASM33_RS07010 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ASM33_RS07010 PF01138 3' exoribonuclease family, domain 1 ASM33_RS07010 PF03725 3' exoribonuclease family, domain 2 ASM33_RS07010 PF00575 S1 RNA binding domain ASM33_RS07010 PF00013 KH domain ASM33_RS07015 PF00312 Ribosomal protein S15 ASM33_RS07020 PF01509 TruB family pseudouridylate synthase (N terminal domain) ASM33_RS07020 PF16198 tRNA pseudouridylate synthase B C-terminal domain ASM33_RS07025 PF01609 Transposase DDE domain ASM33_RS07055 PF04860 Phage portal protein ASM33_RS07065 PF00226 DnaJ domain ASM33_RS07065 PF01556 DnaJ C terminal domain ASM33_RS07065 PF00684 DnaJ central domain ASM33_RS07075 PF02386 Cation transport protein ASM33_RS07095 PF01632 Ribosomal protein L35 ASM33_RS07100 PF00453 Ribosomal protein L20 ASM33_RS07105 PF02911 Formyl transferase, C-terminal domain ASM33_RS07105 PF00551 Formyl transferase ASM33_RS07150 PF12704 MacB-like periplasmic core domain ASM33_RS07150 PF02687 FtsX-like permease family ASM33_RS07165 PF03958 Bacterial type II/III secretion system short domain ASM33_RS07165 PF00263 Bacterial type II and III secretion system protein ASM33_RS07195 PF07508 Recombinase ASM33_RS07195 PF00239 Resolvase, N terminal domain ASM33_RS07195 PF13408 Recombinase zinc beta ribbon domain ASM33_RS07210 PF04002 RadC-like JAB domain ASM33_RS07230 PF01609 Transposase DDE domain ASM33_RS07240 PF00872 Transposase, Mutator family ASM33_RS07260 PF00239 Resolvase, N terminal domain ASM33_RS07260 PF02796 Helix-turn-helix domain of resolvase ASM33_RS07365 PF18755 Restriction Enzyme Adenine Methylase Associated ASM33_RS07365 PF01555 DNA methylase ASM33_RS07425 PF07508 Recombinase ASM33_RS07425 PF00239 Resolvase, N terminal domain ASM33_RS07425 PF13408 Recombinase zinc beta ribbon domain ASM33_RS07525 PF18755 Restriction Enzyme Adenine Methylase Associated ASM33_RS07525 PF01555 DNA methylase ASM33_RS07630 PF17482 Phage tail sheath C-terminal domain ASM33_RS07630 PF04984 Phage tail sheath protein subtilisin-like domain ASM33_RS07685 PF13091 PLD-like domain ASM33_RS07690 PF01734 Patatin-like phospholipase ASM33_RS07710 PF01653 NAD-dependent DNA ligase adenylation domain ASM33_RS07710 PF00533 BRCA1 C Terminus (BRCT) domain ASM33_RS07710 PF12826 Helix-hairpin-helix motif ASM33_RS07710 PF03120 NAD-dependent DNA ligase OB-fold domain ASM33_RS07740 PF13408 Recombinase zinc beta ribbon domain ASM33_RS07740 PF07508 Recombinase ASM33_RS07740 PF00239 Resolvase, N terminal domain ASM33_RS07755 PF04002 RadC-like JAB domain ASM33_RS07765 PF01381 Helix-turn-helix ASM33_RS07785 PF13408 Recombinase zinc beta ribbon domain ASM33_RS07785 PF00239 Resolvase, N terminal domain ASM33_RS07785 PF07508 Recombinase ASM33_RS07840 PF00226 DnaJ domain ASM33_RS07840 PF01556 DnaJ C terminal domain ASM33_RS07840 PF00684 DnaJ central domain ASM33_RS07850 PF03129 Anticodon binding domain ASM33_RS07850 PF13393 Histidyl-tRNA synthetase ASM33_RS07860 PF10396 GTP-binding protein TrmE N-terminus ASM33_RS07860 PF01926 50S ribosome-binding GTPase ASM33_RS07860 PF12631 MnmE helical domain ASM33_RS07865 PF13505 Outer membrane protein beta-barrel domain ASM33_RS07880 PF01066 CDP-alcohol phosphatidyltransferase ASM33_RS07885 PF02666 Phosphatidylserine decarboxylase ASM33_RS07890 PF00154 recA bacterial DNA recombination protein ASM33_RS07925 PF03484 tRNA synthetase B5 domain ASM33_RS07925 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ASM33_RS07925 PF01588 Putative tRNA binding domain ASM33_RS07925 PF03147 Ferredoxin-fold anticodon binding domain ASM33_RS07925 PF03483 B3/4 domain ASM33_RS07945 PF01609 Transposase DDE domain ASM33_RS07950 PF01018 GTP1/OBG ASM33_RS07950 PF01926 50S ribosome-binding GTPase ASM33_RS07955 PF00113 Enolase, C-terminal TIM barrel domain ASM33_RS07955 PF03952 Enolase, N-terminal domain ASM33_RS07960 PF00814 Glycoprotease family ASM33_RS07975 PF00975 Thioesterase domain ASM33_RS07985 PF00005 ABC transporter ASM33_RS07985 PF00664 ABC transporter transmembrane region ASM33_RS07990 PF08402 TOBE domain ASM33_RS07990 PF00005 ABC transporter ASM33_RS08005 PF03129 Anticodon binding domain ASM33_RS08005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASM33_RS08035 PF00121 Triosephosphate isomerase ASM33_RS08045 PF00664 ABC transporter transmembrane region ASM33_RS08045 PF00005 ABC transporter ASM33_RS08050 PF01040 UbiA prenyltransferase family ASM33_RS08055 PF02033 Ribosome-binding factor A ASM33_RS08060 PF04760 Translation initiation factor IF-2, N-terminal region ASM33_RS08060 PF11987 Translation-initiation factor 2 ASM33_RS08060 PF00009 Elongation factor Tu GTP binding domain ASM33_RS08065 PF08529 NusA N-terminal domain ASM33_RS08065 PF00575 S1 RNA binding domain ASM33_RS08065 PF13184 NusA-like KH domain ASM33_RS08085 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASM33_RS08100 PF00266 Aminotransferase class-V ASM33_RS08115 PF01132 Elongation factor P (EF-P) OB domain ASM33_RS08115 PF08207 Elongation factor P (EF-P) KOW-like domain ASM33_RS08115 PF09285 Elongation factor P, C-terminal ASM33_RS08125 PF13932 GidA associated domain ASM33_RS08125 PF01134 Glucose inhibited division protein A ASM33_RS08130 PF01979 Amidohydrolase family ASM33_RS08145 PF00665 Integrase core domain ASM33_RS08150 PF01926 50S ribosome-binding GTPase ASM33_RS08150 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ASM33_RS08175 PF00549 CoA-ligase ASM33_RS08175 PF08442 ATP-grasp domain ASM33_RS08180 PF00549 CoA-ligase ASM33_RS08180 PF02629 CoA binding domain ASM33_RS08190 PF00919 Uncharacterized protein family UPF0004 ASM33_RS08190 PF04055 Radical SAM superfamily ASM33_RS08195 PF02779 Transketolase, pyrimidine binding domain ASM33_RS08195 PF16870 2-oxoglutarate dehydrogenase C-terminal ASM33_RS08195 PF16078 2-oxoglutarate dehydrogenase N-terminus ASM33_RS08195 PF00676 Dehydrogenase E1 component ASM33_RS08200 PF00684 DnaJ central domain ASM33_RS08200 PF01556 DnaJ C terminal domain ASM33_RS08200 PF00226 DnaJ domain ASM33_RS08225 PF00270 DEAD/DEAH box helicase ASM33_RS08225 PF00271 Helicase conserved C-terminal domain ASM33_RS08230 PF00313 'Cold-shock' DNA-binding domain ASM33_RS08235 PF01523 Putative modulator of DNA gyrase ASM33_RS08240 PF00231 ATP synthase ASM33_RS08265 PF00268 Ribonucleotide reductase, small chain ASM33_RS08275 PF00679 Elongation factor G C-terminus ASM33_RS08275 PF00009 Elongation factor Tu GTP binding domain ASM33_RS08275 PF03144 Elongation factor Tu domain 2 ASM33_RS08285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASM33_RS08285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASM33_RS08285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASM33_RS08285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASM33_RS08290 PF01594 AI-2E family transporter