locus-tag class description WBM_RS00005 PF01208 Uroporphyrinogen decarboxylase (URO-D) WBM_RS00025 PF00464 Serine hydroxymethyltransferase WBM_RS00035 PF01926 50S ribosome-binding GTPase WBM_RS00035 PF07650 KH domain WBM_RS00070 PF08946 Osmosensory transporter coiled coil WBM_RS00070 PF00083 Sugar (and other) transporter WBM_RS00075 PF01336 OB-fold nucleic acid binding domain WBM_RS00075 PF00152 tRNA synthetases class II (D, K and N) WBM_RS00075 PF02938 GAD domain WBM_RS00085 PF00005 ABC transporter WBM_RS00090 PF01098 Cell cycle protein WBM_RS00095 PF00361 Proton-conducting membrane transporter WBM_RS00115 PF00312 Ribosomal protein S15 WBM_RS00135 PF00266 Aminotransferase class-V WBM_RS00140 PF02129 X-Pro dipeptidyl-peptidase (S15 family) WBM_RS00150 PF00005 ABC transporter WBM_RS00155 PF01521 Iron-sulphur cluster biosynthesis WBM_RS00160 PF01966 HD domain WBM_RS00160 PF13286 Phosphohydrolase-associated domain WBM_RS00165 PF01872 RibD C-terminal domain WBM_RS00165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WBM_RS00175 PF00266 Aminotransferase class-V WBM_RS00190 PF00639 PPIC-type PPIASE domain WBM_RS00190 PF09312 SurA N-terminal domain WBM_RS00195 PF10396 GTP-binding protein TrmE N-terminus WBM_RS00195 PF12631 MnmE helical domain WBM_RS00195 PF01926 50S ribosome-binding GTPase WBM_RS00225 PF01751 Toprim domain WBM_RS00225 PF01131 DNA topoisomerase WBM_RS00225 PF13368 Topoisomerase C-terminal repeat WBM_RS00225 PF01396 Topoisomerase DNA binding C4 zinc finger WBM_RS00235 PF00528 Binding-protein-dependent transport system inner membrane component WBM_RS00240 PF04379 ApaG domain WBM_RS00245 PF02222 ATP-grasp domain WBM_RS00245 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WBM_RS00250 PF02774 Semialdehyde dehydrogenase, dimerisation domain WBM_RS00250 PF01118 Semialdehyde dehydrogenase, NAD binding domain WBM_RS00265 PF00324 Amino acid permease WBM_RS00270 PF02401 LytB protein WBM_RS00295 PF00448 SRP54-type protein, GTPase domain WBM_RS00295 PF02881 SRP54-type protein, helical bundle domain WBM_RS00295 PF02978 Signal peptide binding domain WBM_RS00315 PF07977 FabA-like domain WBM_RS00325 PF07244 Surface antigen variable number repeat WBM_RS00325 PF01103 Surface antigen WBM_RS00330 PF02163 Peptidase family M50 WBM_RS00330 PF17820 PDZ domain WBM_RS00345 PF00216 Bacterial DNA-binding protein WBM_RS00350 PF00575 S1 RNA binding domain WBM_RS00380 PF10609 NUBPL iron-transfer P-loop NTPase WBM_RS00385 PF01494 FAD binding domain WBM_RS00425 PF01595 Cyclin M transmembrane N-terminal domain WBM_RS00425 PF03471 Transporter associated domain WBM_RS00425 PF00571 CBS domain WBM_RS00430 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) WBM_RS00435 PF02441 Flavoprotein WBM_RS00440 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WBM_RS00440 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WBM_RS00445 PF03422 Carbohydrate binding module (family 6) WBM_RS00445 PF01522 Polysaccharide deacetylase WBM_RS00445 PF00457 Glycosyl hydrolases family 11 WBM_RS00460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WBM_RS00460 PF03129 Anticodon binding domain WBM_RS00465 PF01648 4'-phosphopantetheinyl transferase superfamily WBM_RS00470 PF01790 Prolipoprotein diacylglyceryl transferase WBM_RS00475 PF01668 SmpB protein WBM_RS00495 PF00677 Lumazine binding domain WBM_RS00505 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WBM_RS00505 PF01409 tRNA synthetases class II core domain (F) WBM_RS00510 PF00132 Bacterial transferase hexapeptide (six repeats) WBM_RS00510 PF14602 Hexapeptide repeat of succinyl-transferase WBM_RS00510 PF12804 MobA-like NTP transferase domain WBM_RS00535 PF01386 Ribosomal L25p family WBM_RS00535 PF14693 Ribosomal protein TL5, C-terminal domain WBM_RS00540 PF01195 Peptidyl-tRNA hydrolase WBM_RS00565 PF01791 DeoC/LacD family aldolase WBM_RS00585 PF01180 Dihydroorotate dehydrogenase WBM_RS00590 PF14622 Ribonuclease-III-like WBM_RS00590 PF00035 Double-stranded RNA binding motif WBM_RS00605 PF04055 Radical SAM superfamily WBM_RS00605 PF00919 Uncharacterized protein family UPF0004 WBM_RS00610 PF02686 Glu-tRNAGln amidotransferase C subunit WBM_RS00615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WBM_RS00615 PF14572 Phosphoribosyl synthetase-associated domain WBM_RS00650 PF01795 MraW methylase family WBM_RS00665 PF02817 e3 binding domain WBM_RS00665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WBM_RS00665 PF00364 Biotin-requiring enzyme WBM_RS00695 PF00557 Metallopeptidase family M24 WBM_RS00700 PF02491 SHS2 domain inserted in FTSA WBM_RS00705 PF01327 Polypeptide deformylase WBM_RS00710 PF03167 Uracil DNA glycosylase superfamily WBM_RS00720 PF03330 Lytic transglycolase WBM_RS00725 PF02875 Mur ligase family, glutamate ligase domain WBM_RS00725 PF01225 Mur ligase family, catalytic domain WBM_RS00725 PF08245 Mur ligase middle domain WBM_RS00730 PF00113 Enolase, C-terminal TIM barrel domain WBM_RS00730 PF03952 Enolase, N-terminal domain WBM_RS00735 PF01926 50S ribosome-binding GTPase WBM_RS00735 PF01018 GTP1/OBG WBM_RS00745 PF03023 Lipid II flippase MurJ WBM_RS00760 PF00034 Cytochrome c WBM_RS00765 PF01368 DHH family WBM_RS00765 PF02272 DHHA1 domain WBM_RS00765 PF17768 RecJ OB domain WBM_RS00770 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WBM_RS00775 PF02463 RecF/RecN/SMC N terminal domain WBM_RS00780 PF00578 AhpC/TSA family WBM_RS00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WBM_RS00785 PF00512 His Kinase A (phospho-acceptor) domain WBM_RS00785 PF00989 PAS fold WBM_RS00790 PF00202 Aminotransferase class-III WBM_RS00795 PF01782 RimM N-terminal domain WBM_RS00795 PF05239 PRC-barrel domain WBM_RS00800 PF01132 Elongation factor P (EF-P) OB domain WBM_RS00800 PF09285 Elongation factor P, C-terminal WBM_RS00800 PF08207 Elongation factor P (EF-P) KOW-like domain WBM_RS00810 PF00155 Aminotransferase class I and II WBM_RS00845 PF00183 Hsp90 protein WBM_RS00875 PF02254 TrkA-N domain WBM_RS00875 PF00999 Sodium/hydrogen exchanger family WBM_RS00885 PF02223 Thymidylate kinase WBM_RS00900 PF00004 ATPase family associated with various cellular activities (AAA) WBM_RS00900 PF01434 Peptidase family M41 WBM_RS00900 PF17862 AAA+ lid domain WBM_RS00900 PF06480 FtsH Extracellular WBM_RS00905 PF01171 PP-loop family WBM_RS00910 PF00691 OmpA family WBM_RS00945 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded WBM_RS00955 PF06071 Protein of unknown function (DUF933) WBM_RS00955 PF01926 50S ribosome-binding GTPase WBM_RS00960 PF01743 Poly A polymerase head domain WBM_RS00960 PF13735 tRNA nucleotidyltransferase domain 2 putative WBM_RS00960 PF12627 Probable RNA and SrmB- binding site of polymerase A WBM_RS00995 PF00083 Sugar (and other) transporter WBM_RS00995 PF07690 Major Facilitator Superfamily WBM_RS01005 PF14437 MafB19-like deaminase WBM_RS01010 PF00117 Glutamine amidotransferase class-I WBM_RS01010 PF06418 CTP synthase N-terminus WBM_RS01025 PF12705 PD-(D/E)XK nuclease superfamily WBM_RS01025 PF00580 UvrD/REP helicase N-terminal domain WBM_RS01025 PF13361 UvrD-like helicase C-terminal domain WBM_RS01030 PF00288 GHMP kinases N terminal domain WBM_RS01030 PF08544 GHMP kinases C terminal WBM_RS01035 PF04430 Protein of unknown function (DUF498/DUF598) WBM_RS01040 PF00950 ABC 3 transport family WBM_RS01055 PF01113 Dihydrodipicolinate reductase, N-terminus WBM_RS01055 PF05173 Dihydrodipicolinate reductase, C-terminus WBM_RS01060 PF00005 ABC transporter WBM_RS01065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WBM_RS01065 PF13288 DXP reductoisomerase C-terminal domain WBM_RS01065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WBM_RS01075 PF10431 C-terminal, D2-small domain, of ClpB protein WBM_RS01075 PF02861 Clp amino terminal domain, pathogenicity island component WBM_RS01075 PF17871 AAA lid domain WBM_RS01075 PF07724 AAA domain (Cdc48 subfamily) WBM_RS01075 PF00004 ATPase family associated with various cellular activities (AAA) WBM_RS01080 PF05088 Bacterial NAD-glutamate dehydrogenase WBM_RS01090 PF00990 Diguanylate cyclase, GGDEF domain WBM_RS01090 PF00072 Response regulator receiver domain WBM_RS01100 PF07549 SecD/SecF GG Motif WBM_RS01100 PF02355 Protein export membrane protein WBM_RS01110 PF02096 60Kd inner membrane protein WBM_RS01110 PF14849 YidC periplasmic domain WBM_RS01115 PF00885 6,7-dimethyl-8-ribityllumazine synthase WBM_RS01120 PF01029 NusB family WBM_RS01125 PF01176 Translation initiation factor 1A / IF-1 WBM_RS01130 PF02545 Maf-like protein WBM_RS01140 PF13662 Toprim domain WBM_RS01140 PF08275 DNA primase catalytic core, N-terminal domain WBM_RS01140 PF01807 CHC2 zinc finger WBM_RS01145 PF08241 Methyltransferase domain WBM_RS01155 PF08264 Anticodon-binding domain of tRNA WBM_RS01155 PF09334 tRNA synthetases class I (M) WBM_RS01165 PF01235 Sodium:alanine symporter family WBM_RS01200 PF07690 Major Facilitator Superfamily WBM_RS01205 PF01209 ubiE/COQ5 methyltransferase family WBM_RS01215 PF00005 ABC transporter WBM_RS01215 PF00664 ABC transporter transmembrane region WBM_RS01225 PF05746 DALR anticodon binding domain WBM_RS01225 PF03485 Arginyl tRNA synthetase N terminal domain WBM_RS01225 PF00750 tRNA synthetases class I (R) WBM_RS01235 PF00849 RNA pseudouridylate synthase WBM_RS01235 PF01479 S4 domain WBM_RS01240 PF00676 Dehydrogenase E1 component WBM_RS01250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WBM_RS01250 PF02896 PEP-utilising enzyme, TIM barrel domain WBM_RS01250 PF00391 PEP-utilising enzyme, mobile domain WBM_RS01260 PF00701 Dihydrodipicolinate synthetase family WBM_RS01265 PF00436 Single-strand binding protein family WBM_RS01295 PF00005 ABC transporter WBM_RS01295 PF00664 ABC transporter transmembrane region WBM_RS01300 PF00814 Glycoprotease family WBM_RS01315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WBM_RS01315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WBM_RS01320 PF05193 Peptidase M16 inactive domain WBM_RS01320 PF00675 Insulinase (Peptidase family M16) WBM_RS01325 PF02699 Preprotein translocase subunit WBM_RS01330 PF01380 SIS domain WBM_RS01345 PF02769 AIR synthase related protein, C-terminal domain WBM_RS01345 PF00586 AIR synthase related protein, N-terminal domain WBM_RS01350 PF01259 SAICAR synthetase WBM_RS01355 PF01746 tRNA (Guanine-1)-methyltransferase WBM_RS01360 PF01245 Ribosomal protein L19 WBM_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component WBM_RS01385 PF03099 Biotin/lipoate A/B protein ligase family WBM_RS01390 PF00834 Ribulose-phosphate 3 epimerase family WBM_RS01400 PF04321 RmlD substrate binding domain WBM_RS01405 PF02875 Mur ligase family, glutamate ligase domain WBM_RS01405 PF08245 Mur ligase middle domain WBM_RS01405 PF01225 Mur ligase family, catalytic domain WBM_RS01415 PF01230 HIT domain WBM_RS01420 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WBM_RS01425 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WBM_RS01430 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WBM_RS01435 PF00056 lactate/malate dehydrogenase, NAD binding domain WBM_RS01435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WBM_RS01440 PF01026 TatD related DNase WBM_RS01445 PF00293 NUDIX domain WBM_RS01455 PF00579 tRNA synthetases class I (W and Y) WBM_RS01475 PF01330 RuvA N terminal domain WBM_RS01475 PF07499 RuvA, C-terminal domain WBM_RS01480 PF17864 RuvB AAA lid domain WBM_RS01480 PF05496 Holliday junction DNA helicase RuvB P-loop domain WBM_RS01480 PF05491 RuvB C-terminal winged helix domain WBM_RS01490 PF02245 Methylpurine-DNA glycosylase (MPG) WBM_RS01495 PF13537 Glutamine amidotransferase domain WBM_RS01495 PF00156 Phosphoribosyl transferase domain WBM_RS01500 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBM_RS01515 PF01624 MutS domain I WBM_RS01515 PF05188 MutS domain II WBM_RS01515 PF00488 MutS domain V WBM_RS01515 PF05190 MutS family domain IV WBM_RS01515 PF05192 MutS domain III WBM_RS01520 PF01612 3'-5' exonuclease WBM_RS01520 PF00570 HRDC domain WBM_RS01525 PF01121 Dephospho-CoA kinase WBM_RS01540 PF17755 UvrA DNA-binding domain WBM_RS01540 PF17760 UvrA interaction domain WBM_RS01565 PF07517 SecA DEAD-like domain WBM_RS01565 PF07516 SecA Wing and Scaffold domain WBM_RS01565 PF01043 SecA preprotein cross-linking domain WBM_RS01565 PF02810 SEC-C motif WBM_RS01575 PF00268 Ribonucleotide reductase, small chain WBM_RS01595 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WBM_RS01595 PF02769 AIR synthase related protein, C-terminal domain WBM_RS01595 PF00586 AIR synthase related protein, N-terminal domain WBM_RS01600 PF12705 PD-(D/E)XK nuclease superfamily WBM_RS01605 PF00709 Adenylosuccinate synthetase WBM_RS01615 PF00120 Glutamine synthetase, catalytic domain WBM_RS01620 PF00308 Bacterial dnaA protein WBM_RS01620 PF11638 DnaA N-terminal domain WBM_RS01620 PF08299 Bacterial dnaA protein helix-turn-helix WBM_RS01635 PF00925 GTP cyclohydrolase II WBM_RS01640 PF04335 VirB8 protein WBM_RS01655 PF00437 Type II/IV secretion system protein WBM_RS01660 PF02534 Type IV secretory system Conjugative DNA transfer WBM_RS01670 PF05175 Methyltransferase small domain WBM_RS01670 PF17827 PrmC N-terminal domain WBM_RS01670 PF02390 Putative methyltransferase WBM_RS01675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal WBM_RS01675 PF01578 Cytochrome C assembly protein WBM_RS01685 PF11967 Recombination protein O N terminal WBM_RS01685 PF02565 Recombination protein O C terminal WBM_RS01695 PF07943 Penicillin-binding protein 5, C-terminal domain WBM_RS01695 PF00768 D-alanyl-D-alanine carboxypeptidase WBM_RS01705 PF00692 dUTPase WBM_RS01720 PF00571 CBS domain WBM_RS01720 PF03448 MgtE intracellular N domain WBM_RS01720 PF01769 Divalent cation transporter WBM_RS01725 PF03462 PCRF domain WBM_RS01725 PF00472 RF-1 domain WBM_RS01750 PF00902 Sec-independent protein translocase protein (TatC) WBM_RS01755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WBM_RS01755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WBM_RS01765 PF00772 DnaB-like helicase N terminal domain WBM_RS01765 PF03796 DnaB-like helicase C terminal domain WBM_RS01775 PF06271 RDD family WBM_RS01790 PF00830 Ribosomal L28 family WBM_RS01795 PF04055 Radical SAM superfamily WBM_RS01795 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WBM_RS01820 PF00075 RNase H WBM_RS01825 PF01040 UbiA prenyltransferase family WBM_RS01830 PF00115 Cytochrome C and Quinol oxidase polypeptide I WBM_RS01835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WBM_RS01835 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WBM_RS01840 PF00529 HlyD membrane-fusion protein of T1SS WBM_RS01840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WBM_RS01860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WBM_RS01860 PF00925 GTP cyclohydrolase II WBM_RS01865 PF01272 Transcription elongation factor, GreA/GreB, C-term WBM_RS01865 PF03449 Transcription elongation factor, N-terminal WBM_RS01870 PF02874 ATP synthase alpha/beta family, beta-barrel domain WBM_RS01870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WBM_RS01870 PF00306 ATP synthase alpha/beta chain, C terminal domain WBM_RS01875 PF00213 ATP synthase delta (OSCP) subunit WBM_RS01885 PF01196 Ribosomal protein L17 WBM_RS01890 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WBM_RS01890 PF01000 RNA polymerase Rpb3/RpoA insert domain WBM_RS01890 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WBM_RS01895 PF00411 Ribosomal protein S11 WBM_RS01900 PF00416 Ribosomal protein S13/S18 WBM_RS01910 PF00344 SecY translocase WBM_RS01915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WBM_RS01920 PF00333 Ribosomal protein S5, N-terminal domain WBM_RS01920 PF03719 Ribosomal protein S5, C-terminal domain WBM_RS01925 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WBM_RS01930 PF00347 Ribosomal protein L6 WBM_RS01935 PF00410 Ribosomal protein S8 WBM_RS01940 PF00253 Ribosomal protein S14p/S29e WBM_RS01945 PF00281 Ribosomal protein L5 WBM_RS01945 PF00673 ribosomal L5P family C-terminus WBM_RS01950 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WBM_RS01955 PF00238 Ribosomal protein L14p/L23e WBM_RS01960 PF00366 Ribosomal protein S17 WBM_RS01965 PF00831 Ribosomal L29 protein WBM_RS01970 PF00252 Ribosomal protein L16p/L10e WBM_RS01975 PF07650 KH domain WBM_RS01975 PF00189 Ribosomal protein S3, C-terminal domain WBM_RS01980 PF00237 Ribosomal protein L22p/L17e WBM_RS01985 PF00203 Ribosomal protein S19 WBM_RS01990 PF00181 Ribosomal Proteins L2, RNA binding domain WBM_RS01990 PF03947 Ribosomal Proteins L2, C-terminal domain WBM_RS01995 PF00276 Ribosomal protein L23 WBM_RS02000 PF00573 Ribosomal protein L4/L1 family WBM_RS02005 PF00297 Ribosomal protein L3 WBM_RS02010 PF00338 Ribosomal protein S10p/S20e WBM_RS02015 PF03143 Elongation factor Tu C-terminal domain WBM_RS02015 PF03144 Elongation factor Tu domain 2 WBM_RS02015 PF00009 Elongation factor Tu GTP binding domain WBM_RS02020 PF03144 Elongation factor Tu domain 2 WBM_RS02020 PF00679 Elongation factor G C-terminus WBM_RS02020 PF14492 Elongation Factor G, domain II WBM_RS02020 PF00009 Elongation factor Tu GTP binding domain WBM_RS02020 PF03764 Elongation factor G, domain IV WBM_RS02025 PF00177 Ribosomal protein S7p/S5e WBM_RS02030 PF00164 Ribosomal protein S12/S23 WBM_RS02050 PF01571 Aminomethyltransferase folate-binding domain WBM_RS02055 PF00166 Chaperonin 10 Kd subunit WBM_RS02060 PF00118 TCP-1/cpn60 chaperonin family WBM_RS02100 PF00692 dUTPase WBM_RS02105 PF00696 Amino acid kinase family WBM_RS02110 PF01926 50S ribosome-binding GTPase WBM_RS02115 PF00472 RF-1 domain WBM_RS02115 PF03462 PCRF domain WBM_RS02120 PF07690 Major Facilitator Superfamily WBM_RS02135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WBM_RS02135 PF01411 tRNA synthetases class II (A) WBM_RS02145 PF08264 Anticodon-binding domain of tRNA WBM_RS02145 PF00133 tRNA synthetases class I (I, L, M and V) WBM_RS02150 PF01938 TRAM domain WBM_RS02150 PF04055 Radical SAM superfamily WBM_RS02150 PF00919 Uncharacterized protein family UPF0004 WBM_RS02155 PF00633 Helix-hairpin-helix motif WBM_RS02155 PF10576 Iron-sulfur binding domain of endonuclease III WBM_RS02155 PF00730 HhH-GPD superfamily base excision DNA repair protein WBM_RS02165 PF00180 Isocitrate/isopropylmalate dehydrogenase WBM_RS02165 PF18324 Hypothetical protein TT1725 WBM_RS02180 PF02091 Glycyl-tRNA synthetase alpha subunit WBM_RS02185 PF02092 Glycyl-tRNA synthetase beta subunit WBM_RS02185 PF05746 DALR anticodon binding domain WBM_RS02190 PF01541 GIY-YIG catalytic domain WBM_RS02190 PF08459 UvrC Helix-hairpin-helix N-terminal WBM_RS02190 PF02151 UvrB/uvrC motif WBM_RS02200 PF00490 Delta-aminolevulinic acid dehydratase WBM_RS02210 PF00146 NADH dehydrogenase WBM_RS02215 PF00384 Molybdopterin oxidoreductase WBM_RS02215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WBM_RS02215 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WBM_RS02230 PF13091 PLD-like domain WBM_RS02235 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WBM_RS02260 PF02779 Transketolase, pyrimidine binding domain WBM_RS02260 PF16078 2-oxoglutarate dehydrogenase N-terminus WBM_RS02260 PF16870 2-oxoglutarate dehydrogenase C-terminal WBM_RS02260 PF00676 Dehydrogenase E1 component WBM_RS02265 PF01545 Cation efflux family WBM_RS02280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WBM_RS02280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WBM_RS02290 PF01192 RNA polymerase Rpb6 WBM_RS02315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WBM_RS02320 PF04542 Sigma-70 region 2 WBM_RS02320 PF00140 Sigma-70 factor, region 1.2 WBM_RS02320 PF04539 Sigma-70 region 3 WBM_RS02320 PF04546 Sigma-70, non-essential region WBM_RS02320 PF03979 Sigma-70 factor, region 1.1 WBM_RS02320 PF04545 Sigma-70, region 4 WBM_RS02330 PF16870 2-oxoglutarate dehydrogenase C-terminal WBM_RS02330 PF02779 Transketolase, pyrimidine binding domain WBM_RS02330 PF16078 2-oxoglutarate dehydrogenase N-terminus WBM_RS02330 PF00676 Dehydrogenase E1 component WBM_RS02340 PF01119 DNA mismatch repair protein, C-terminal domain WBM_RS02340 PF08676 MutL C terminal dimerisation domain WBM_RS02345 PF00731 AIR carboxylase WBM_RS02350 PF13416 Bacterial extracellular solute-binding protein WBM_RS02360 PF01513 ATP-NAD kinase WBM_RS02365 PF01197 Ribosomal protein L31 WBM_RS02370 PF00698 Acyl transferase domain WBM_RS02375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WBM_RS02375 PF01676 Metalloenzyme superfamily WBM_RS02410 PF00521 DNA gyrase/topoisomerase IV, subunit A WBM_RS02410 PF03989 DNA gyrase C-terminal domain, beta-propeller WBM_RS02415 PF00355 Rieske [2Fe-2S] domain WBM_RS02415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WBM_RS02420 PF00398 Ribosomal RNA adenine dimethylase WBM_RS02430 PF00121 Triosephosphate isomerase WBM_RS02435 PF02542 YgbB family WBM_RS02435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WBM_RS02455 PF01808 AICARFT/IMPCHase bienzyme WBM_RS02455 PF02142 MGS-like domain WBM_RS02460 PF03129 Anticodon binding domain WBM_RS02460 PF13393 Histidyl-tRNA synthetase WBM_RS02475 PF00462 Glutaredoxin WBM_RS02480 PF01687 Riboflavin kinase WBM_RS02480 PF06574 FAD synthetase WBM_RS02485 PF01252 Signal peptidase (SPase) II WBM_RS02490 PF00675 Insulinase (Peptidase family M16) WBM_RS02490 PF05193 Peptidase M16 inactive domain WBM_RS02505 PF00551 Formyl transferase WBM_RS02510 PF01899 Na+/H+ ion antiporter subunit WBM_RS02520 PF02660 Glycerol-3-phosphate acyltransferase WBM_RS02525 PF01235 Sodium:alanine symporter family WBM_RS02535 PF01066 CDP-alcohol phosphatidyltransferase WBM_RS02540 PF02666 Phosphatidylserine decarboxylase WBM_RS02545 PF00154 recA bacterial DNA recombination protein WBM_RS02550 PF01416 tRNA pseudouridine synthase WBM_RS02555 PF02768 DNA polymerase III beta subunit, C-terminal domain WBM_RS02555 PF02767 DNA polymerase III beta subunit, central domain WBM_RS02555 PF00712 DNA polymerase III beta subunit, N-terminal domain WBM_RS02565 PF04542 Sigma-70 region 2 WBM_RS02565 PF04545 Sigma-70, region 4 WBM_RS02565 PF00140 Sigma-70 factor, region 1.2 WBM_RS02570 PF13505 Outer membrane protein beta-barrel domain WBM_RS02575 PF02575 YbaB/EbfC DNA-binding family WBM_RS02580 PF12169 DNA polymerase III subunits gamma and tau domain III WBM_RS02590 PF01596 O-methyltransferase WBM_RS02600 PF13462 Thioredoxin WBM_RS02605 PF03364 Polyketide cyclase / dehydrase and lipid transport WBM_RS02620 PF00696 Amino acid kinase family WBM_RS02620 PF01842 ACT domain WBM_RS02620 PF13840 ACT domain WBM_RS02630 PF03741 Integral membrane protein TerC family WBM_RS02635 PF00958 GMP synthase C terminal domain WBM_RS02635 PF00117 Glutamine amidotransferase class-I WBM_RS02645 PF00749 tRNA synthetases class I (E and Q), catalytic domain WBM_RS02655 PF01979 Amidohydrolase family WBM_RS02665 PF02910 Fumarate reductase flavoprotein C-term WBM_RS02665 PF00890 FAD binding domain WBM_RS02675 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WBM_RS02675 PF00132 Bacterial transferase hexapeptide (six repeats) WBM_RS02675 PF14602 Hexapeptide repeat of succinyl-transferase WBM_RS02695 PF00749 tRNA synthetases class I (E and Q), catalytic domain WBM_RS02705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WBM_RS02705 PF00289 Biotin carboxylase, N-terminal domain WBM_RS02705 PF02785 Biotin carboxylase C-terminal domain WBM_RS02710 PF02628 Cytochrome oxidase assembly protein WBM_RS02730 PF00137 ATP synthase subunit C WBM_RS02735 PF00119 ATP synthase A chain WBM_RS02740 PF01588 Putative tRNA binding domain WBM_RS02740 PF03483 B3/4 domain WBM_RS02740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WBM_RS02740 PF03147 Ferredoxin-fold anticodon binding domain WBM_RS02740 PF03484 tRNA synthetase B5 domain WBM_RS02745 PF01207 Dihydrouridine synthase (Dus) WBM_RS02755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WBM_RS02755 PF02403 Seryl-tRNA synthetase N-terminal domain WBM_RS02760 PF02844 Phosphoribosylglycinamide synthetase, N domain WBM_RS02760 PF02843 Phosphoribosylglycinamide synthetase, C domain WBM_RS02760 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WBM_RS02785 PF17770 Ribonuclease J C-terminal domain WBM_RS02785 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WBM_RS02785 PF12706 Beta-lactamase superfamily domain WBM_RS02795 PF12838 4Fe-4S dicluster domain WBM_RS02800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WBM_RS02800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WBM_RS02800 PF03129 Anticodon binding domain WBM_RS02805 PF05198 Translation initiation factor IF-3, N-terminal domain WBM_RS02805 PF00707 Translation initiation factor IF-3, C-terminal domain WBM_RS02815 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WBM_RS02815 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WBM_RS02815 PF10531 SLBB domain WBM_RS02835 PF03631 Virulence factor BrkB WBM_RS02845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WBM_RS02845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WBM_RS02845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WBM_RS02845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WBM_RS02860 PF12704 MacB-like periplasmic core domain WBM_RS02860 PF02687 FtsX-like permease family WBM_RS02875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WBM_RS02880 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WBM_RS02900 PF08032 RNA 2'-O ribose methyltransferase substrate binding WBM_RS02900 PF00588 SpoU rRNA Methylase family WBM_RS02905 PF01027 Inhibitor of apoptosis-promoting Bax1 WBM_RS02910 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WBM_RS02915 PF08245 Mur ligase middle domain WBM_RS02915 PF02875 Mur ligase family, glutamate ligase domain WBM_RS02920 PF01053 Cys/Met metabolism PLP-dependent enzyme WBM_RS02925 PF01722 BolA-like protein WBM_RS02930 PF00012 Hsp70 protein WBM_RS02935 PF00575 S1 RNA binding domain WBM_RS02935 PF10150 Ribonuclease E/G family WBM_RS02935 PF12111 Polyribonucleotide phosphorylase C terminal WBM_RS02940 PF00471 Ribosomal protein L33 WBM_RS02960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WBM_RS02960 PF07733 Bacterial DNA polymerase III alpha NTPase domain WBM_RS02960 PF14579 Helix-hairpin-helix motif WBM_RS02960 PF02811 PHP domain WBM_RS02965 PF01250 Ribosomal protein S6 WBM_RS02970 PF01084 Ribosomal protein S18 WBM_RS02975 PF03948 Ribosomal protein L9, C-terminal domain WBM_RS02975 PF01281 Ribosomal protein L9, N-terminal domain WBM_RS02980 PF10397 Adenylosuccinate lyase C-terminus WBM_RS02980 PF00206 Lyase WBM_RS02990 PF00206 Lyase WBM_RS02990 PF10415 Fumarase C C-terminus WBM_RS02995 PF03918 Cytochrome C biogenesis protein WBM_RS03005 PF00111 2Fe-2S iron-sulfur cluster binding domain WBM_RS03010 PF08245 Mur ligase middle domain WBM_RS03040 PF02142 MGS-like domain WBM_RS03040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WBM_RS03040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WBM_RS03055 PF02632 BioY family WBM_RS03065 PF01678 Diaminopimelate epimerase WBM_RS03070 PF02629 CoA binding domain WBM_RS03070 PF00549 CoA-ligase WBM_RS03075 PF00549 CoA-ligase WBM_RS03075 PF08442 ATP-grasp domain WBM_RS03120 PF00478 IMP dehydrogenase / GMP reductase domain WBM_RS03120 PF00571 CBS domain WBM_RS03130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WBM_RS03130 PF07498 Rho termination factor, N-terminal domain WBM_RS03130 PF07497 Rho termination factor, RNA-binding domain WBM_RS03140 PF00639 PPIC-type PPIASE domain WBM_RS03145 PF00886 Ribosomal protein S16 WBM_RS03150 PF00348 Polyprenyl synthetase WBM_RS03155 PF01025 GrpE WBM_RS03160 PF00579 tRNA synthetases class I (W and Y) WBM_RS03175 PF01040 UbiA prenyltransferase family WBM_RS03180 PF02033 Ribosome-binding factor A WBM_RS03185 PF00009 Elongation factor Tu GTP binding domain WBM_RS03185 PF04760 Translation initiation factor IF-2, N-terminal region WBM_RS03185 PF11987 Translation-initiation factor 2 WBM_RS03190 PF13184 NusA-like KH domain WBM_RS03190 PF08529 NusA N-terminal domain WBM_RS03190 PF00575 S1 RNA binding domain WBM_RS03210 PF00171 Aldehyde dehydrogenase family WBM_RS03210 PF14850 DNA-binding domain of Proline dehydrogenase WBM_RS03210 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WBM_RS03210 PF01619 Proline dehydrogenase WBM_RS03215 PF00330 Aconitase family (aconitate hydratase) WBM_RS03215 PF00694 Aconitase C-terminal domain WBM_RS03220 PF02556 Preprotein translocase subunit SecB WBM_RS03230 PF00929 Exonuclease WBM_RS03235 PF02630 SCO1/SenC WBM_RS03285 PF00533 BRCA1 C Terminus (BRCT) domain WBM_RS03285 PF03120 NAD-dependent DNA ligase OB-fold domain WBM_RS03285 PF01653 NAD-dependent DNA ligase adenylation domain WBM_RS03290 PF01975 Survival protein SurE WBM_RS03300 PF02190 ATP-dependent protease La (LON) substrate-binding domain WBM_RS03300 PF05362 Lon protease (S16) C-terminal proteolytic domain WBM_RS03300 PF00004 ATPase family associated with various cellular activities (AAA) WBM_RS03305 PF10431 C-terminal, D2-small domain, of ClpB protein WBM_RS03305 PF06689 ClpX C4-type zinc finger WBM_RS03305 PF07724 AAA domain (Cdc48 subfamily) WBM_RS03310 PF00574 Clp protease WBM_RS03315 PF05697 Bacterial trigger factor protein (TF) WBM_RS03315 PF05698 Bacterial trigger factor protein (TF) C-terminus WBM_RS03315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WBM_RS03325 PF04972 BON domain WBM_RS03330 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WBM_RS03330 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WBM_RS03335 PF04101 Glycosyltransferase family 28 C-terminal domain WBM_RS03335 PF03033 Glycosyltransferase family 28 N-terminal domain WBM_RS03345 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBM_RS03345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WBM_RS03355 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBM_RS03355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WBM_RS03360 PF02899 Phage integrase, N-terminal SAM-like domain WBM_RS03360 PF00589 Phage integrase family WBM_RS03380 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBM_RS03385 PF10417 C-terminal domain of 1-Cys peroxiredoxin WBM_RS03385 PF00578 AhpC/TSA family WBM_RS03390 PF07687 Peptidase dimerisation domain WBM_RS03390 PF01546 Peptidase family M20/M25/M40 WBM_RS03405 PF11953 Domain of unknown function (DUF3470) WBM_RS03405 PF00037 4Fe-4S binding domain WBM_RS03420 PF08478 POTRA domain, FtsQ-type WBM_RS03420 PF03799 Cell division protein FtsQ WBM_RS03435 PF00380 Ribosomal protein S9/S16 WBM_RS03440 PF00572 Ribosomal protein L13 WBM_RS03455 PF01728 FtsJ-like methyltransferase WBM_RS03465 PF01258 Prokaryotic dksA/traR C4-type zinc finger WBM_RS03470 PF00625 Guanylate kinase WBM_RS03490 PF00719 Inorganic pyrophosphatase WBM_RS03505 PF01926 50S ribosome-binding GTPase WBM_RS03505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WBM_RS03520 PF01039 Carboxyl transferase domain WBM_RS03530 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WBM_RS03530 PF06827 Zinc finger found in FPG and IleRS WBM_RS03530 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WBM_RS03565 PF00361 Proton-conducting membrane transporter WBM_RS03570 PF01702 Queuine tRNA-ribosyltransferase WBM_RS03585 PF00486 Transcriptional regulatory protein, C terminal WBM_RS03585 PF00072 Response regulator receiver domain WBM_RS03590 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WBM_RS03590 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WBM_RS03595 PF04608 Phosphatidylglycerophosphatase A WBM_RS03610 PF13085 2Fe-2S iron-sulfur cluster binding domain WBM_RS03615 PF02130 Uncharacterized protein family UPF0054 WBM_RS03625 PF12327 FtsZ family, C-terminal domain WBM_RS03625 PF00091 Tubulin/FtsZ family, GTPase domain WBM_RS03650 PF13603 Leucyl-tRNA synthetase, Domain 2 WBM_RS03650 PF08264 Anticodon-binding domain of tRNA WBM_RS03650 PF09334 tRNA synthetases class I (M) WBM_RS03650 PF00133 tRNA synthetases class I (I, L, M and V) WBM_RS03655 PF01551 Peptidase family M23 WBM_RS03675 PF00085 Thioredoxin WBM_RS03695 PF13932 GidA associated domain WBM_RS03695 PF01134 Glucose inhibited division protein A WBM_RS03700 PF00557 Metallopeptidase family M24 WBM_RS03700 PF01321 Creatinase/Prolidase N-terminal domain WBM_RS03710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WBM_RS03710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WBM_RS03715 PF02504 Fatty acid synthesis protein WBM_RS03720 PF01783 Ribosomal L32p protein family WBM_RS03725 PF02405 Permease MlaE WBM_RS03730 PF00005 ABC transporter WBM_RS03735 PF03100 CcmE WBM_RS03740 PF02237 Biotin protein ligase C terminal domain WBM_RS03740 PF08279 HTH domain WBM_RS03740 PF03099 Biotin/lipoate A/B protein ligase family WBM_RS03745 PF00361 Proton-conducting membrane transporter WBM_RS03750 PF00361 Proton-conducting membrane transporter WBM_RS03755 PF00361 Proton-conducting membrane transporter WBM_RS03755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WBM_RS03760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WBM_RS03765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WBM_RS03780 PF00580 UvrD/REP helicase N-terminal domain WBM_RS03780 PF13361 UvrD-like helicase C-terminal domain WBM_RS03785 PF00107 Zinc-binding dehydrogenase WBM_RS03785 PF08240 Alcohol dehydrogenase GroES-like domain WBM_RS03805 PF02789 Cytosol aminopeptidase family, N-terminal domain WBM_RS03805 PF00883 Cytosol aminopeptidase family, catalytic domain WBM_RS03810 PF00775 Dioxygenase WBM_RS03815 PF00444 Ribosomal protein L36 WBM_RS03820 PF03618 Kinase/pyrophosphorylase WBM_RS03825 PF01578 Cytochrome C assembly protein WBM_RS03835 PF17191 RecG wedge domain WBM_RS03835 PF00271 Helicase conserved C-terminal domain WBM_RS03835 PF00270 DEAD/DEAH box helicase WBM_RS03855 PF01300 Telomere recombination WBM_RS03860 PF12169 DNA polymerase III subunits gamma and tau domain III WBM_RS03875 PF01351 Ribonuclease HII WBM_RS03880 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WBM_RS03880 PF00953 Glycosyl transferase family 4 WBM_RS03885 PF09397 Ftsk gamma domain WBM_RS03885 PF17854 FtsK alpha domain WBM_RS03885 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WBM_RS03885 PF01580 FtsK/SpoIIIE family WBM_RS03900 PF16320 Ribosomal protein L7/L12 dimerisation domain WBM_RS03900 PF00542 Ribosomal protein L7/L12 C-terminal domain WBM_RS03905 PF00466 Ribosomal protein L10 WBM_RS03910 PF00687 Ribosomal protein L1p/L10e family WBM_RS03915 PF03946 Ribosomal protein L11, N-terminal domain WBM_RS03915 PF00298 Ribosomal protein L11, RNA binding domain WBM_RS03920 PF02357 Transcription termination factor nusG WBM_RS03920 PF00467 KOW motif WBM_RS03935 PF00009 Elongation factor Tu GTP binding domain WBM_RS03935 PF03144 Elongation factor Tu domain 2 WBM_RS03935 PF03143 Elongation factor Tu C-terminal domain WBM_RS03950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WBM_RS03950 PF00117 Glutamine amidotransferase class-I WBM_RS03960 PF02911 Formyl transferase, C-terminal domain WBM_RS03960 PF00551 Formyl transferase WBM_RS03965 PF00453 Ribosomal protein L20 WBM_RS03970 PF01632 Ribosomal protein L35 WBM_RS03980 PF13411 MerR HTH family regulatory protein WBM_RS03985 PF00216 Bacterial DNA-binding protein WBM_RS04010 PF04384 Iron-sulphur cluster assembly WBM_RS04020 PF00163 Ribosomal protein S4/S9 N-terminal domain WBM_RS04020 PF01479 S4 domain WBM_RS04025 PF00456 Transketolase, thiamine diphosphate binding domain WBM_RS04025 PF02779 Transketolase, pyrimidine binding domain WBM_RS04025 PF02780 Transketolase, C-terminal domain WBM_RS04035 PF00364 Biotin-requiring enzyme WBM_RS04035 PF02780 Transketolase, C-terminal domain WBM_RS04035 PF02779 Transketolase, pyrimidine binding domain WBM_RS04045 PF03144 Elongation factor Tu domain 2 WBM_RS04045 PF00679 Elongation factor G C-terminus WBM_RS04045 PF14492 Elongation Factor G, domain II WBM_RS04045 PF00009 Elongation factor Tu GTP binding domain WBM_RS04045 PF06421 GTP-binding protein LepA C-terminus WBM_RS04080 PF01709 Transcriptional regulator WBM_RS04095 PF01066 CDP-alcohol phosphatidyltransferase WBM_RS04100 PF03949 Malic enzyme, NAD binding domain WBM_RS04100 PF01515 Phosphate acetyl/butaryl transferase WBM_RS04100 PF00390 Malic enzyme, N-terminal domain WBM_RS04110 PF00462 Glutaredoxin WBM_RS04125 PF00005 ABC transporter WBM_RS04125 PF08402 TOBE domain WBM_RS04130 PF02416 mttA/Hcf106 family WBM_RS04135 PF06055 Exopolysaccharide synthesis, ExoD WBM_RS04170 PF00162 Phosphoglycerate kinase WBM_RS04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase WBM_RS04185 PF00923 Transaldolase/Fructose-6-phosphate aldolase WBM_RS04195 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WBM_RS04200 PF02874 ATP synthase alpha/beta family, beta-barrel domain WBM_RS04200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WBM_RS04205 PF00528 Binding-protein-dependent transport system inner membrane component WBM_RS04235 PF02867 Ribonucleotide reductase, barrel domain WBM_RS04235 PF00317 Ribonucleotide reductase, all-alpha domain WBM_RS04235 PF03477 ATP cone domain WBM_RS04240 PF03652 Holliday junction resolvase WBM_RS04245 PF02075 Crossover junction endodeoxyribonuclease RuvC WBM_RS04250 PF00510 Cytochrome c oxidase subunit III WBM_RS04260 PF00438 S-adenosylmethionine synthetase, N-terminal domain WBM_RS04260 PF02772 S-adenosylmethionine synthetase, central domain WBM_RS04260 PF02773 S-adenosylmethionine synthetase, C-terminal domain WBM_RS04270 PF01016 Ribosomal L27 protein WBM_RS04275 PF00829 Ribosomal prokaryotic L21 protein WBM_RS04300 PF02934 GatB/GatE catalytic domain WBM_RS04300 PF02637 GatB domain WBM_RS04305 PF00231 ATP synthase WBM_RS04310 PF01523 Putative modulator of DNA gyrase WBM_RS04315 PF00313 'Cold-shock' DNA-binding domain WBM_RS04320 PF00270 DEAD/DEAH box helicase WBM_RS04320 PF00271 Helicase conserved C-terminal domain WBM_RS04335 PF01218 Coproporphyrinogen III oxidase WBM_RS04340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WBM_RS04340 PF08448 PAS fold WBM_RS04340 PF00512 His Kinase A (phospho-acceptor) domain WBM_RS04340 PF13188 PAS domain WBM_RS04340 PF00072 Response regulator receiver domain WBM_RS04370 PF02646 RmuC family WBM_RS04400 PF03109 ABC1 family WBM_RS04405 PF00005 ABC transporter WBM_RS04410 PF01297 Zinc-uptake complex component A periplasmic WBM_RS04415 PF00334 Nucleoside diphosphate kinase WBM_RS04425 PF00762 Ferrochelatase WBM_RS04440 PF00227 Proteasome subunit WBM_RS04445 PF10431 C-terminal, D2-small domain, of ClpB protein WBM_RS04445 PF07724 AAA domain (Cdc48 subfamily) WBM_RS04445 PF00004 ATPase family associated with various cellular activities (AAA) WBM_RS04455 PF00476 DNA polymerase family A WBM_RS04455 PF01367 5'-3' exonuclease, C-terminal SAM fold WBM_RS04455 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WBM_RS04465 PF01523 Putative modulator of DNA gyrase WBM_RS04490 PF03372 Endonuclease/Exonuclease/phosphatase family WBM_RS04495 PF01594 AI-2E family transporter WBM_RS04500 PF00308 Bacterial dnaA protein WBM_RS04505 PF02899 Phage integrase, N-terminal SAM-like domain WBM_RS04505 PF00589 Phage integrase family WBM_RS04515 PF01649 Ribosomal protein S20 WBM_RS04520 PF00285 Citrate synthase, C-terminal domain WBM_RS04530 PF00348 Polyprenyl synthetase WBM_RS04535 PF00550 Phosphopantetheine attachment site WBM_RS04540 PF00109 Beta-ketoacyl synthase, N-terminal domain WBM_RS04540 PF02801 Beta-ketoacyl synthase, C-terminal domain WBM_RS04545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WBM_RS04550 PF02511 Thymidylate synthase complementing protein WBM_RS04570 PF00270 DEAD/DEAH box helicase WBM_RS04570 PF00271 Helicase conserved C-terminal domain WBM_RS04570 PF17764 3′ DNA-binding domain (3′BD) WBM_RS04570 PF18074 Primosomal protein N C-terminal domain WBM_RS04570 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WBM_RS04575 PF02132 RecR protein WBM_RS04575 PF13662 Toprim domain WBM_RS04585 PF02817 e3 binding domain WBM_RS04585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WBM_RS04585 PF00364 Biotin-requiring enzyme WBM_RS04605 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WBM_RS04620 PF03060 Nitronate monooxygenase WBM_RS04635 PF00448 SRP54-type protein, GTPase domain WBM_RS04635 PF02881 SRP54-type protein, helical bundle domain WBM_RS04640 PF01592 NifU-like N terminal domain WBM_RS04645 PF01521 Iron-sulphur cluster biosynthesis WBM_RS04650 PF00226 DnaJ domain WBM_RS04650 PF07743 HSCB C-terminal oligomerisation domain WBM_RS04655 PF00012 Hsp70 protein WBM_RS04660 PF10502 Signal peptidase, peptidase S26 WBM_RS04670 PF01425 Amidase WBM_RS04675 PF00204 DNA gyrase B WBM_RS04675 PF01751 Toprim domain WBM_RS04675 PF00986 DNA gyrase B subunit, carboxyl terminus WBM_RS04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WBM_RS04695 PF01145 SPFH domain / Band 7 family WBM_RS04700 PF01145 SPFH domain / Band 7 family WBM_RS04705 PF13180 PDZ domain WBM_RS04725 PF12344 Ultra-violet resistance protein B WBM_RS04725 PF02151 UvrB/uvrC motif WBM_RS04725 PF17757 UvrB interaction domain WBM_RS04725 PF00271 Helicase conserved C-terminal domain WBM_RS04725 PF04851 Type III restriction enzyme, res subunit WBM_RS04730 PF02167 Cytochrome C1 family WBM_RS04730 PF00032 Cytochrome b(C-terminal)/b6/petD WBM_RS04730 PF00033 Cytochrome b/b6/petB WBM_RS04735 PF00032 Cytochrome b(C-terminal)/b6/petD WBM_RS04735 PF00033 Cytochrome b/b6/petB WBM_RS04760 PF03900 Porphobilinogen deaminase, C-terminal domain WBM_RS04760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WBM_RS04765 PF01565 FAD binding domain WBM_RS04765 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WBM_RS04780 PF04551 GcpE protein WBM_RS04805 PF00684 DnaJ central domain WBM_RS04805 PF00226 DnaJ domain WBM_RS04805 PF01556 DnaJ C terminal domain WBM_RS04810 PF00133 tRNA synthetases class I (I, L, M and V) WBM_RS04810 PF08264 Anticodon-binding domain of tRNA WBM_RS04815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WBM_RS04830 PF02355 Protein export membrane protein WBM_RS04835 PF00375 Sodium:dicarboxylate symporter family WBM_RS04840 PF00156 Phosphoribosyl transferase domain WBM_RS04860 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WBM_RS04865 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WBM_RS04875 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WBM_RS04880 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WBM_RS04890 PF01921 tRNA synthetases class I (K) WBM_RS04905 PF01467 Cytidylyltransferase-like WBM_RS04920 PF01255 Putative undecaprenyl diphosphate synthase WBM_RS04925 PF01765 Ribosome recycling factor WBM_RS04930 PF00696 Amino acid kinase family WBM_RS04935 PF00889 Elongation factor TS WBM_RS04940 PF00318 Ribosomal protein S2 WBM_RS04960 PF03471 Transporter associated domain WBM_RS04960 PF00571 CBS domain WBM_RS05525 PF02325 YGGT family WBM_RS05535 PF04560 RNA polymerase Rpb2, domain 7 WBM_RS05535 PF10385 RNA polymerase beta subunit external 1 domain WBM_RS05535 PF04565 RNA polymerase Rpb2, domain 3 WBM_RS05535 PF04563 RNA polymerase beta subunit WBM_RS05535 PF04561 RNA polymerase Rpb2, domain 2 WBM_RS05535 PF04998 RNA polymerase Rpb1, domain 5 WBM_RS05535 PF05000 RNA polymerase Rpb1, domain 4 WBM_RS05535 PF04983 RNA polymerase Rpb1, domain 3 WBM_RS05535 PF00623 RNA polymerase Rpb1, domain 2 WBM_RS05535 PF04997 RNA polymerase Rpb1, domain 1 WBM_RS05535 PF00562 RNA polymerase Rpb2, domain 6 WBM_RS05580 PF00468 Ribosomal protein L34