locus-tag class description WRI_RS00010 PF00308 Bacterial dnaA protein WRI_RS00010 PF11638 DnaA N-terminal domain WRI_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix WRI_RS00025 PF00925 GTP cyclohydrolase II WRI_RS00030 PF04335 VirB8 protein WRI_RS00045 PF00437 Type II/IV secretion system protein WRI_RS00050 PF02534 Type IV secretory system Conjugative DNA transfer WRI_RS00060 PF17827 PrmC N-terminal domain WRI_RS00060 PF02390 Putative methyltransferase WRI_RS00060 PF05175 Methyltransferase small domain WRI_RS00065 PF00164 Ribosomal protein S12/S23 WRI_RS00070 PF00177 Ribosomal protein S7p/S5e WRI_RS00075 PF03144 Elongation factor Tu domain 2 WRI_RS00075 PF00009 Elongation factor Tu GTP binding domain WRI_RS00075 PF03764 Elongation factor G, domain IV WRI_RS00075 PF14492 Elongation Factor G, domain II WRI_RS00075 PF00679 Elongation factor G C-terminus WRI_RS00080 PF03144 Elongation factor Tu domain 2 WRI_RS00080 PF00009 Elongation factor Tu GTP binding domain WRI_RS00080 PF03143 Elongation factor Tu C-terminal domain WRI_RS00095 PF00467 KOW motif WRI_RS00095 PF02357 Transcription termination factor nusG WRI_RS00100 PF00298 Ribosomal protein L11, RNA binding domain WRI_RS00100 PF03946 Ribosomal protein L11, N-terminal domain WRI_RS00105 PF00687 Ribosomal protein L1p/L10e family WRI_RS00110 PF00466 Ribosomal protein L10 WRI_RS00115 PF16320 Ribosomal protein L7/L12 dimerisation domain WRI_RS00115 PF00542 Ribosomal protein L7/L12 C-terminal domain WRI_RS00120 PF04560 RNA polymerase Rpb2, domain 7 WRI_RS00120 PF10385 RNA polymerase beta subunit external 1 domain WRI_RS00120 PF04565 RNA polymerase Rpb2, domain 3 WRI_RS00120 PF04561 RNA polymerase Rpb2, domain 2 WRI_RS00120 PF04563 RNA polymerase beta subunit WRI_RS00120 PF05000 RNA polymerase Rpb1, domain 4 WRI_RS00120 PF04983 RNA polymerase Rpb1, domain 3 WRI_RS00120 PF00623 RNA polymerase Rpb1, domain 2 WRI_RS00120 PF04997 RNA polymerase Rpb1, domain 1 WRI_RS00120 PF04998 RNA polymerase Rpb1, domain 5 WRI_RS00120 PF00562 RNA polymerase Rpb2, domain 6 WRI_RS00125 PF01207 Dihydrouridine synthase (Dus) WRI_RS00135 PF02403 Seryl-tRNA synthetase N-terminal domain WRI_RS00135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WRI_RS00140 PF02844 Phosphoribosylglycinamide synthetase, N domain WRI_RS00140 PF02843 Phosphoribosylglycinamide synthetase, C domain WRI_RS00140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WRI_RS00155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WRI_RS00155 PF14572 Phosphoribosyl synthetase-associated domain WRI_RS00160 PF02686 Glu-tRNAGln amidotransferase C subunit WRI_RS00165 PF04052 TolB amino-terminal domain WRI_RS00165 PF07676 WD40-like Beta Propeller Repeat WRI_RS00170 PF12706 Beta-lactamase superfamily domain WRI_RS00170 PF17770 Ribonuclease J C-terminal domain WRI_RS00170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain WRI_RS00175 PF00684 DnaJ central domain WRI_RS00175 PF00226 DnaJ domain WRI_RS00175 PF01556 DnaJ C terminal domain WRI_RS00220 PF00883 Cytosol aminopeptidase family, catalytic domain WRI_RS00220 PF02789 Cytosol aminopeptidase family, N-terminal domain WRI_RS00230 PF00216 Bacterial DNA-binding protein WRI_RS00240 PF01551 Peptidase family M23 WRI_RS00245 PF09334 tRNA synthetases class I (M) WRI_RS00245 PF00133 tRNA synthetases class I (I, L, M and V) WRI_RS00245 PF08264 Anticodon-binding domain of tRNA WRI_RS00245 PF13603 Leucyl-tRNA synthetase, Domain 2 WRI_RS00275 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WRI_RS00285 PF00380 Ribosomal protein S9/S16 WRI_RS00290 PF00572 Ribosomal protein L13 WRI_RS00300 PF10691 Protein of unknown function (DUF2497) WRI_RS00305 PF01728 FtsJ-like methyltransferase WRI_RS00390 PF10609 NUBPL iron-transfer P-loop NTPase WRI_RS00395 PF01494 FAD binding domain WRI_RS00405 PF01195 Peptidyl-tRNA hydrolase WRI_RS00410 PF01386 Ribosomal L25p family WRI_RS00410 PF14693 Ribosomal protein TL5, C-terminal domain WRI_RS00425 PF01795 MraW methylase family WRI_RS00430 PF07690 Major Facilitator Superfamily WRI_RS00430 PF00083 Sugar (and other) transporter WRI_RS00435 PF00557 Metallopeptidase family M24 WRI_RS00440 PF02491 SHS2 domain inserted in FTSA WRI_RS00445 PF01327 Polypeptide deformylase WRI_RS00450 PF03167 Uracil DNA glycosylase superfamily WRI_RS00465 PF00384 Molybdopterin oxidoreductase WRI_RS00465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WRI_RS00465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal WRI_RS00470 PF00146 NADH dehydrogenase WRI_RS00475 PF00490 Delta-aminolevulinic acid dehydratase WRI_RS00485 PF02091 Glycyl-tRNA synthetase alpha subunit WRI_RS00490 PF05746 DALR anticodon binding domain WRI_RS00490 PF02092 Glycyl-tRNA synthetase beta subunit WRI_RS00495 PF01541 GIY-YIG catalytic domain WRI_RS00495 PF02151 UvrB/uvrC motif WRI_RS00495 PF08459 UvrC Helix-hairpin-helix N-terminal WRI_RS00505 PF08402 TOBE domain WRI_RS00505 PF00005 ABC transporter WRI_RS00510 PF02416 mttA/Hcf106 family WRI_RS00520 PF06055 Exopolysaccharide synthesis, ExoD WRI_RS00525 PF01406 tRNA synthetases class I (C) catalytic domain WRI_RS00525 PF09190 DALR domain WRI_RS00540 PF02637 GatB domain WRI_RS00540 PF02934 GatB/GatE catalytic domain WRI_RS00555 PF03652 Holliday junction resolvase WRI_RS00560 PF02075 Crossover junction endodeoxyribonuclease RuvC WRI_RS00565 PF00510 Cytochrome c oxidase subunit III WRI_RS00575 PF03070 TENA/THI-4/PQQC family WRI_RS00580 PF02773 S-adenosylmethionine synthetase, C-terminal domain WRI_RS00580 PF02772 S-adenosylmethionine synthetase, central domain WRI_RS00580 PF00438 S-adenosylmethionine synthetase, N-terminal domain WRI_RS00590 PF01016 Ribosomal L27 protein WRI_RS00595 PF00829 Ribosomal prokaryotic L21 protein WRI_RS00600 PF12804 MobA-like NTP transferase domain WRI_RS00600 PF14602 Hexapeptide repeat of succinyl-transferase WRI_RS00600 PF00132 Bacterial transferase hexapeptide (six repeats) WRI_RS00605 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WRI_RS00605 PF01409 tRNA synthetases class II core domain (F) WRI_RS00615 PF00677 Lumazine binding domain WRI_RS00640 PF13491 4TM region of DNA translocase FtsK/SpoIIIE WRI_RS00640 PF17854 FtsK alpha domain WRI_RS00640 PF09397 Ftsk gamma domain WRI_RS00640 PF01580 FtsK/SpoIIIE family WRI_RS00655 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS00675 PF04551 GcpE protein WRI_RS00680 PF01609 Transposase DDE domain WRI_RS00715 PF01751 Toprim domain WRI_RS00715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WRI_RS00715 PF00986 DNA gyrase B subunit, carboxyl terminus WRI_RS00715 PF00204 DNA gyrase B WRI_RS00720 PF02630 SCO1/SenC WRI_RS00725 PF00929 Exonuclease WRI_RS00735 PF02556 Preprotein translocase subunit SecB WRI_RS00740 PF00330 Aconitase family (aconitate hydratase) WRI_RS00740 PF00694 Aconitase C-terminal domain WRI_RS00745 PF14850 DNA-binding domain of Proline dehydrogenase WRI_RS00745 PF18327 Proline utilization A proline dehydrogenase N-terminal domain WRI_RS00745 PF01619 Proline dehydrogenase WRI_RS00745 PF00171 Aldehyde dehydrogenase family WRI_RS00755 PF00893 Small Multidrug Resistance protein WRI_RS00760 PF00893 Small Multidrug Resistance protein WRI_RS00765 PF00768 D-alanyl-D-alanine carboxypeptidase WRI_RS00765 PF07943 Penicillin-binding protein 5, C-terminal domain WRI_RS00770 PF08478 POTRA domain, FtsQ-type WRI_RS00770 PF03799 Cell division protein FtsQ WRI_RS00775 PF07478 D-ala D-ala ligase C-terminus WRI_RS00775 PF01820 D-ala D-ala ligase N-terminus WRI_RS00785 PF11953 Domain of unknown function (DUF3470) WRI_RS00785 PF00037 4Fe-4S binding domain WRI_RS00790 PF17782 DprA winged helix domain WRI_RS00790 PF02481 DNA recombination-mediator protein A WRI_RS00795 PF00121 Triosephosphate isomerase WRI_RS00805 PF00398 Ribosomal RNA adenine dimethylase WRI_RS00810 PF00478 IMP dehydrogenase / GMP reductase domain WRI_RS00810 PF00571 CBS domain WRI_RS00820 PF02355 Protein export membrane protein WRI_RS00860 PF01121 Dephospho-CoA kinase WRI_RS00865 PF01612 3'-5' exonuclease WRI_RS00865 PF00570 HRDC domain WRI_RS00875 PF05192 MutS domain III WRI_RS00875 PF05188 MutS domain II WRI_RS00875 PF00488 MutS domain V WRI_RS00875 PF01624 MutS domain I WRI_RS00875 PF05190 MutS family domain IV WRI_RS00890 PF03741 Integral membrane protein TerC family WRI_RS00890 PF00571 CBS domain WRI_RS00890 PF03471 Transporter associated domain WRI_RS00895 PF00117 Glutamine amidotransferase class-I WRI_RS00895 PF00958 GMP synthase C terminal domain WRI_RS00895 PF02540 NAD synthase WRI_RS00900 PF03477 ATP cone domain WRI_RS00900 PF02867 Ribonucleotide reductase, barrel domain WRI_RS00900 PF00317 Ribonucleotide reductase, all-alpha domain WRI_RS00905 PF01209 ubiE/COQ5 methyltransferase family WRI_RS00930 PF00528 Binding-protein-dependent transport system inner membrane component WRI_RS00935 PF02874 ATP synthase alpha/beta family, beta-barrel domain WRI_RS00935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WRI_RS00940 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WRI_RS00965 PF00596 Class II Aldolase and Adducin N-terminal domain WRI_RS00975 PF00814 Glycoprotease family WRI_RS00985 PF00268 Ribonucleotide reductase, small chain WRI_RS01005 PF11967 Recombination protein O N terminal WRI_RS01005 PF02565 Recombination protein O C terminal WRI_RS01010 PF00990 Diguanylate cyclase, GGDEF domain WRI_RS01010 PF00072 Response regulator receiver domain WRI_RS01020 PF05088 Bacterial NAD-glutamate dehydrogenase WRI_RS01025 PF10431 C-terminal, D2-small domain, of ClpB protein WRI_RS01025 PF02861 Clp amino terminal domain, pathogenicity island component WRI_RS01025 PF17871 AAA lid domain WRI_RS01025 PF07724 AAA domain (Cdc48 subfamily) WRI_RS01025 PF00004 ATPase family associated with various cellular activities (AAA) WRI_RS01035 PF00679 Elongation factor G C-terminus WRI_RS01035 PF00009 Elongation factor Tu GTP binding domain WRI_RS01035 PF03144 Elongation factor Tu domain 2 WRI_RS01040 PF00156 Phosphoribosyl transferase domain WRI_RS01045 PF00375 Sodium:dicarboxylate symporter family WRI_RS01050 PF01979 Amidohydrolase family WRI_RS01060 PF01578 Cytochrome C assembly protein WRI_RS01060 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal WRI_RS01070 PF07549 SecD/SecF GG Motif WRI_RS01070 PF02355 Protein export membrane protein WRI_RS01090 PF14849 YidC periplasmic domain WRI_RS01090 PF02096 60Kd inner membrane protein WRI_RS01095 PF00885 6,7-dimethyl-8-ribityllumazine synthase WRI_RS01100 PF01029 NusB family WRI_RS01115 PF00692 dUTPase WRI_RS01125 PF00696 Amino acid kinase family WRI_RS01130 PF01926 50S ribosome-binding GTPase WRI_RS01135 PF03462 PCRF domain WRI_RS01135 PF00472 RF-1 domain WRI_RS01140 PF07690 Major Facilitator Superfamily WRI_RS01160 PF02646 RmuC family WRI_RS01165 PF01609 Transposase DDE domain WRI_RS01185 PF01425 Amidase WRI_RS01190 PF04055 Radical SAM superfamily WRI_RS01190 PF00919 Uncharacterized protein family UPF0004 WRI_RS01215 PF03330 Lytic transglycolase WRI_RS01220 PF02875 Mur ligase family, glutamate ligase domain WRI_RS01220 PF01225 Mur ligase family, catalytic domain WRI_RS01220 PF08245 Mur ligase middle domain WRI_RS01225 PF00113 Enolase, C-terminal TIM barrel domain WRI_RS01225 PF03952 Enolase, N-terminal domain WRI_RS01230 PF01018 GTP1/OBG WRI_RS01230 PF01926 50S ribosome-binding GTPase WRI_RS01235 PF00206 Lyase WRI_RS01235 PF10415 Fumarase C C-terminus WRI_RS01245 PF00462 Glutaredoxin WRI_RS01255 PF01515 Phosphate acetyl/butaryl transferase WRI_RS01255 PF00390 Malic enzyme, N-terminal domain WRI_RS01255 PF03949 Malic enzyme, NAD binding domain WRI_RS01260 PF01066 CDP-alcohol phosphatidyltransferase WRI_RS01280 PF13525 Outer membrane lipoprotein WRI_RS01285 PF01709 Transcriptional regulator WRI_RS01290 PF01551 Peptidase family M23 WRI_RS01290 PF08525 Opacity-associated protein A N-terminal motif WRI_RS01290 PF01476 LysM domain WRI_RS01320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WRI_RS01320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WRI_RS01325 PF00902 Sec-independent protein translocase protein (TatC) WRI_RS01330 PF01316 Arginine repressor, DNA binding domain WRI_RS01330 PF02863 Arginine repressor, C-terminal domain WRI_RS01335 PF00497 Bacterial extracellular solute-binding proteins, family 3 WRI_RS01340 PF00528 Binding-protein-dependent transport system inner membrane component WRI_RS01345 PF00005 ABC transporter WRI_RS01365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WRI_RS01385 PF00133 tRNA synthetases class I (I, L, M and V) WRI_RS01385 PF08264 Anticodon-binding domain of tRNA WRI_RS01405 PF00117 Glutamine amidotransferase class-I WRI_RS01405 PF06418 CTP synthase N-terminus WRI_RS01410 PF14437 MafB19-like deaminase WRI_RS01425 PF00083 Sugar (and other) transporter WRI_RS01425 PF07690 Major Facilitator Superfamily WRI_RS01435 PF00004 ATPase family associated with various cellular activities (AAA) WRI_RS01435 PF01434 Peptidase family M41 WRI_RS01435 PF17862 AAA+ lid domain WRI_RS01440 PF00364 Biotin-requiring enzyme WRI_RS01440 PF02779 Transketolase, pyrimidine binding domain WRI_RS01440 PF02780 Transketolase, C-terminal domain WRI_RS01455 PF06421 GTP-binding protein LepA C-terminus WRI_RS01455 PF03144 Elongation factor Tu domain 2 WRI_RS01455 PF00009 Elongation factor Tu GTP binding domain WRI_RS01455 PF00679 Elongation factor G C-terminus WRI_RS01455 PF14492 Elongation Factor G, domain II WRI_RS01490 PF01743 Poly A polymerase head domain WRI_RS01490 PF12627 Probable RNA and SrmB- binding site of polymerase A WRI_RS01490 PF13735 tRNA nucleotidyltransferase domain 2 putative WRI_RS01500 PF01926 50S ribosome-binding GTPase WRI_RS01500 PF06071 Protein of unknown function (DUF933) WRI_RS01515 PF00625 Guanylate kinase WRI_RS01525 PF02910 Fumarate reductase flavoprotein C-term WRI_RS01525 PF00890 FAD binding domain WRI_RS01530 PF00749 tRNA synthetases class I (E and Q), catalytic domain WRI_RS01540 PF02785 Biotin carboxylase C-terminal domain WRI_RS01540 PF00289 Biotin carboxylase, N-terminal domain WRI_RS01540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WRI_RS01540 PF00364 Biotin-requiring enzyme WRI_RS01540 PF18140 Propionyl-coenzyme A carboxylase BT domain WRI_RS01545 PF02628 Cytochrome oxidase assembly protein WRI_RS01565 PF00137 ATP synthase subunit C WRI_RS01570 PF00119 ATP synthase A chain WRI_RS01580 PF03483 B3/4 domain WRI_RS01580 PF03484 tRNA synthetase B5 domain WRI_RS01580 PF03147 Ferredoxin-fold anticodon binding domain WRI_RS01580 PF01588 Putative tRNA binding domain WRI_RS01580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain WRI_RS01590 PF08264 Anticodon-binding domain of tRNA WRI_RS01590 PF00133 tRNA synthetases class I (I, L, M and V) WRI_RS01595 PF00854 POT family WRI_RS01600 PF00919 Uncharacterized protein family UPF0004 WRI_RS01600 PF01938 TRAM domain WRI_RS01600 PF04055 Radical SAM superfamily WRI_RS01605 PF03653 Uncharacterised protein family (UPF0093) WRI_RS01610 PF00676 Dehydrogenase E1 component WRI_RS01615 PF01479 S4 domain WRI_RS01615 PF00849 RNA pseudouridylate synthase WRI_RS01620 PF08946 Osmosensory transporter coiled coil WRI_RS01620 PF00083 Sugar (and other) transporter WRI_RS01625 PF02938 GAD domain WRI_RS01625 PF00152 tRNA synthetases class II (D, K and N) WRI_RS01625 PF01336 OB-fold nucleic acid binding domain WRI_RS01635 PF00005 ABC transporter WRI_RS01675 PF01467 Cytidylyltransferase-like WRI_RS01690 PF01255 Putative undecaprenyl diphosphate synthase WRI_RS01695 PF01765 Ribosome recycling factor WRI_RS01700 PF00696 Amino acid kinase family WRI_RS01705 PF00889 Elongation factor TS WRI_RS01710 PF00318 Ribosomal protein S2 WRI_RS01720 PF02699 Preprotein translocase subunit WRI_RS01725 PF01380 SIS domain WRI_RS01735 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS01755 PF01565 FAD binding domain WRI_RS01755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WRI_RS01760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WRI_RS01760 PF03900 Porphobilinogen deaminase, C-terminal domain WRI_RS01765 PF02817 e3 binding domain WRI_RS01765 PF00364 Biotin-requiring enzyme WRI_RS01765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WRI_RS01800 PF07516 SecA Wing and Scaffold domain WRI_RS01800 PF01043 SecA preprotein cross-linking domain WRI_RS01800 PF07517 SecA DEAD-like domain WRI_RS01800 PF02810 SEC-C motif WRI_RS01820 PF00923 Transaldolase/Fructose-6-phosphate aldolase WRI_RS01840 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS01860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WRI_RS01860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WRI_RS01865 PF02441 Flavoprotein WRI_RS01870 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) WRI_RS01875 PF01595 Cyclin M transmembrane N-terminal domain WRI_RS01875 PF03471 Transporter associated domain WRI_RS01875 PF00571 CBS domain WRI_RS01880 PF00202 Aminotransferase class-III WRI_RS01885 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WRI_RS01890 PF01527 Transposase WRI_RS01900 PF03485 Arginyl tRNA synthetase N terminal domain WRI_RS01900 PF05746 DALR anticodon binding domain WRI_RS01900 PF00750 tRNA synthetases class I (R) WRI_RS01920 PF00664 ABC transporter transmembrane region WRI_RS01920 PF00005 ABC transporter WRI_RS01930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS01950 PF01098 Cell cycle protein WRI_RS01955 PF01209 ubiE/COQ5 methyltransferase family WRI_RS01960 PF04055 Radical SAM superfamily WRI_RS01960 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family WRI_RS01965 PF00830 Ribosomal L28 family WRI_RS01975 PF04384 Iron-sulphur cluster assembly WRI_RS01985 PF01479 S4 domain WRI_RS01985 PF00163 Ribosomal protein S4/S9 N-terminal domain WRI_RS01990 PF00456 Transketolase, thiamine diphosphate binding domain WRI_RS01990 PF02779 Transketolase, pyrimidine binding domain WRI_RS01990 PF02780 Transketolase, C-terminal domain WRI_RS02040 PF07690 Major Facilitator Superfamily WRI_RS02050 PF00692 dUTPase WRI_RS02065 PF02386 Cation transport protein WRI_RS02070 PF01769 Divalent cation transporter WRI_RS02070 PF03448 MgtE intracellular N domain WRI_RS02070 PF00571 CBS domain WRI_RS02075 PF03462 PCRF domain WRI_RS02075 PF00472 RF-1 domain WRI_RS02090 PF00005 ABC transporter WRI_RS02095 PF01113 Dihydrodipicolinate reductase, N-terminus WRI_RS02095 PF05173 Dihydrodipicolinate reductase, C-terminus WRI_RS02115 PF00950 ABC 3 transport family WRI_RS02125 PF00288 GHMP kinases N terminal domain WRI_RS02125 PF08544 GHMP kinases C terminal WRI_RS02130 PF13361 UvrD-like helicase C-terminal domain WRI_RS02130 PF00580 UvrD/REP helicase N-terminal domain WRI_RS02130 PF12705 PD-(D/E)XK nuclease superfamily WRI_RS02140 PF04002 RadC-like JAB domain WRI_RS02145 PF06271 RDD family WRI_RS02155 PF03796 DnaB-like helicase C terminal domain WRI_RS02155 PF00772 DnaB-like helicase N terminal domain WRI_RS02170 PF08264 Anticodon-binding domain of tRNA WRI_RS02170 PF09334 tRNA synthetases class I (M) WRI_RS02180 PF08241 Methyltransferase domain WRI_RS02185 PF01807 CHC2 zinc finger WRI_RS02185 PF13662 Toprim domain WRI_RS02185 PF08275 DNA primase catalytic core, N-terminal domain WRI_RS02190 PF02661 Fic/DOC family WRI_RS02190 PF13784 Fic/DOC family N-terminal WRI_RS02195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WRI_RS02215 PF00444 Ribosomal protein L36 WRI_RS02220 PF03618 Kinase/pyrophosphorylase WRI_RS02225 PF01578 Cytochrome C assembly protein WRI_RS02230 PF00709 Adenylosuccinate synthetase WRI_RS02245 PF01176 Translation initiation factor 1A / IF-1 WRI_RS02250 PF02545 Maf-like protein WRI_RS02260 PF01235 Sodium:alanine symporter family WRI_RS02280 PF00118 TCP-1/cpn60 chaperonin family WRI_RS02285 PF00166 Chaperonin 10 Kd subunit WRI_RS02290 PF01571 Aminomethyltransferase folate-binding domain WRI_RS02295 PF01368 DHH family WRI_RS02295 PF17768 RecJ OB domain WRI_RS02295 PF02272 DHHA1 domain WRI_RS02310 PF00115 Cytochrome C and Quinol oxidase polypeptide I WRI_RS02320 PF00664 ABC transporter transmembrane region WRI_RS02320 PF00005 ABC transporter WRI_RS02325 PF00004 ATPase family associated with various cellular activities (AAA) WRI_RS02325 PF05362 Lon protease (S16) C-terminal proteolytic domain WRI_RS02325 PF02190 ATP-dependent protease La (LON) substrate-binding domain WRI_RS02330 PF06689 ClpX C4-type zinc finger WRI_RS02330 PF10431 C-terminal, D2-small domain, of ClpB protein WRI_RS02330 PF07724 AAA domain (Cdc48 subfamily) WRI_RS02335 PF00574 Clp protease WRI_RS02340 PF05698 Bacterial trigger factor protein (TF) C-terminus WRI_RS02340 PF05697 Bacterial trigger factor protein (TF) WRI_RS02340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WRI_RS02350 PF04972 BON domain WRI_RS02355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain WRI_RS02355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain WRI_RS02360 PF03033 Glycosyltransferase family 28 N-terminal domain WRI_RS02360 PF04101 Glycosyltransferase family 28 C-terminal domain WRI_RS02370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WRI_RS02370 PF07992 Pyridine nucleotide-disulphide oxidoreductase WRI_RS02395 PF00075 RNase H WRI_RS02400 PF01040 UbiA prenyltransferase family WRI_RS02405 PF00115 Cytochrome C and Quinol oxidase polypeptide I WRI_RS02410 PF02790 Cytochrome C oxidase subunit II, transmembrane domain WRI_RS02410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain WRI_RS02425 PF00529 HlyD membrane-fusion protein of T1SS WRI_RS02425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion WRI_RS02445 PF00925 GTP cyclohydrolase II WRI_RS02445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WRI_RS02450 PF01272 Transcription elongation factor, GreA/GreB, C-term WRI_RS02450 PF03449 Transcription elongation factor, N-terminal WRI_RS02455 PF02874 ATP synthase alpha/beta family, beta-barrel domain WRI_RS02455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WRI_RS02455 PF00306 ATP synthase alpha/beta chain, C terminal domain WRI_RS02460 PF00213 ATP synthase delta (OSCP) subunit WRI_RS02465 PF02021 Uncharacterised protein family UPF0102 WRI_RS02470 PF01196 Ribosomal protein L17 WRI_RS02475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WRI_RS02475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WRI_RS02475 PF01000 RNA polymerase Rpb3/RpoA insert domain WRI_RS02480 PF00411 Ribosomal protein S11 WRI_RS02485 PF00416 Ribosomal protein S13/S18 WRI_RS02495 PF00344 SecY translocase WRI_RS02500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A WRI_RS02505 PF03719 Ribosomal protein S5, C-terminal domain WRI_RS02505 PF00333 Ribosomal protein S5, N-terminal domain WRI_RS02510 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast WRI_RS02515 PF00347 Ribosomal protein L6 WRI_RS02520 PF00410 Ribosomal protein S8 WRI_RS02525 PF00253 Ribosomal protein S14p/S29e WRI_RS02530 PF00281 Ribosomal protein L5 WRI_RS02530 PF00673 ribosomal L5P family C-terminus WRI_RS02535 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 WRI_RS02540 PF00238 Ribosomal protein L14p/L23e WRI_RS02545 PF00366 Ribosomal protein S17 WRI_RS02550 PF00831 Ribosomal L29 protein WRI_RS02555 PF00252 Ribosomal protein L16p/L10e WRI_RS02560 PF07650 KH domain WRI_RS02560 PF00189 Ribosomal protein S3, C-terminal domain WRI_RS02565 PF00237 Ribosomal protein L22p/L17e WRI_RS02570 PF00203 Ribosomal protein S19 WRI_RS02575 PF00181 Ribosomal Proteins L2, RNA binding domain WRI_RS02575 PF03947 Ribosomal Proteins L2, C-terminal domain WRI_RS02580 PF00276 Ribosomal protein L23 WRI_RS02585 PF00573 Ribosomal protein L4/L1 family WRI_RS02590 PF00297 Ribosomal protein L3 WRI_RS02595 PF00338 Ribosomal protein S10p/S20e WRI_RS02600 PF03144 Elongation factor Tu domain 2 WRI_RS02600 PF03143 Elongation factor Tu C-terminal domain WRI_RS02600 PF00009 Elongation factor Tu GTP binding domain WRI_RS02615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WRI_RS02615 PF00117 Glutamine amidotransferase class-I WRI_RS02630 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded WRI_RS02645 PF00391 PEP-utilising enzyme, mobile domain WRI_RS02645 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WRI_RS02645 PF02896 PEP-utilising enzyme, TIM barrel domain WRI_RS02655 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS02695 PF00239 Resolvase, N terminal domain WRI_RS02695 PF02796 Helix-turn-helix domain of resolvase WRI_RS02810 PF00023 Ankyrin repeat WRI_RS02820 PF18755 Restriction Enzyme Adenine Methylase Associated WRI_RS02820 PF01555 DNA methylase WRI_RS02835 PF01348 Type II intron maturase WRI_RS02835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS02855 PF12419 SNF2 Helicase protein WRI_RS02855 PF00271 Helicase conserved C-terminal domain WRI_RS02855 PF00176 SNF2 family N-terminal domain WRI_RS02860 PF12804 MobA-like NTP transferase domain WRI_RS02860 PF14602 Hexapeptide repeat of succinyl-transferase WRI_RS02860 PF00132 Bacterial transferase hexapeptide (six repeats) WRI_RS02865 PF16363 GDP-mannose 4,6 dehydratase WRI_RS02885 PF00664 ABC transporter transmembrane region WRI_RS02885 PF00005 ABC transporter WRI_RS02890 PF01212 Beta-eliminating lyase WRI_RS02895 PF01212 Beta-eliminating lyase WRI_RS02905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WRI_RS02905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WRI_RS02905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WRI_RS02910 PF00892 EamA-like transporter family WRI_RS02930 PF04002 RadC-like JAB domain WRI_RS02935 PF01381 Helix-turn-helix WRI_RS02945 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS02985 PF07992 Pyridine nucleotide-disulphide oxidoreductase WRI_RS02990 PF10417 C-terminal domain of 1-Cys peroxiredoxin WRI_RS02990 PF00578 AhpC/TSA family WRI_RS03000 PF00462 Glutaredoxin WRI_RS03005 PF01687 Riboflavin kinase WRI_RS03005 PF06574 FAD synthetase WRI_RS03010 PF01252 Signal peptidase (SPase) II WRI_RS03015 PF05193 Peptidase M16 inactive domain WRI_RS03015 PF00675 Insulinase (Peptidase family M16) WRI_RS03025 PF00551 Formyl transferase WRI_RS03045 PF01668 SmpB protein WRI_RS03050 PF01790 Prolipoprotein diacylglyceryl transferase WRI_RS03055 PF00005 ABC transporter WRI_RS03055 PF00664 ABC transporter transmembrane region WRI_RS03090 PF00436 Single-strand binding protein family WRI_RS03095 PF00701 Dihydrodipicolinate synthetase family WRI_RS03100 PF00533 BRCA1 C Terminus (BRCT) domain WRI_RS03100 PF12826 Helix-hairpin-helix motif WRI_RS03100 PF01653 NAD-dependent DNA ligase adenylation domain WRI_RS03100 PF03120 NAD-dependent DNA ligase OB-fold domain WRI_RS03100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WRI_RS03105 PF00749 tRNA synthetases class I (E and Q), catalytic domain WRI_RS03110 PF02811 PHP domain WRI_RS03110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain WRI_RS03110 PF07733 Bacterial DNA polymerase III alpha NTPase domain WRI_RS03110 PF14579 Helix-hairpin-helix motif WRI_RS03115 PF01250 Ribosomal protein S6 WRI_RS03120 PF01084 Ribosomal protein S18 WRI_RS03125 PF03948 Ribosomal protein L9, C-terminal domain WRI_RS03125 PF01281 Ribosomal protein L9, N-terminal domain WRI_RS03130 PF00206 Lyase WRI_RS03130 PF10397 Adenylosuccinate lyase C-terminus WRI_RS03140 PF13685 Iron-containing alcohol dehydrogenase WRI_RS03145 PF07687 Peptidase dimerisation domain WRI_RS03145 PF01546 Peptidase family M20/M25/M40 WRI_RS03155 PF10576 Iron-sulfur binding domain of endonuclease III WRI_RS03155 PF00633 Helix-hairpin-helix motif WRI_RS03155 PF00730 HhH-GPD superfamily base excision DNA repair protein WRI_RS03165 PF18324 Hypothetical protein TT1725 WRI_RS03165 PF00180 Isocitrate/isopropylmalate dehydrogenase WRI_RS03180 PF07497 Rho termination factor, RNA-binding domain WRI_RS03180 PF07498 Rho termination factor, N-terminal domain WRI_RS03180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WRI_RS03220 PF00814 Glycoprotease family WRI_RS03230 PF00266 Aminotransferase class-V WRI_RS03235 PF02129 X-Pro dipeptidyl-peptidase (S15 family) WRI_RS03245 PF00005 ABC transporter WRI_RS03250 PF01521 Iron-sulphur cluster biosynthesis WRI_RS03255 PF01966 HD domain WRI_RS03255 PF13286 Phosphohydrolase-associated domain WRI_RS03260 PF01872 RibD C-terminal domain WRI_RS03260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WRI_RS03270 PF00834 Ribulose-phosphate 3 epimerase family WRI_RS03280 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WRI_RS03280 PF14602 Hexapeptide repeat of succinyl-transferase WRI_RS03280 PF00132 Bacterial transferase hexapeptide (six repeats) WRI_RS03305 PF03717 Penicillin-binding Protein dimerisation domain WRI_RS03305 PF00905 Penicillin binding protein transpeptidase domain WRI_RS03310 PF01522 Polysaccharide deacetylase WRI_RS03310 PF03422 Carbohydrate binding module (family 6) WRI_RS03310 PF00457 Glycosyl hydrolases family 11 WRI_RS03315 PF04002 RadC-like JAB domain WRI_RS03415 PF00011 Hsp20/alpha crystallin family WRI_RS03435 PF12796 Ankyrin repeats (3 copies) WRI_RS03455 PF01734 Patatin-like phospholipase WRI_RS03500 PF04984 Phage tail sheath protein subtilisin-like domain WRI_RS03500 PF17482 Phage tail sheath C-terminal domain WRI_RS03610 PF17761 DUF1016 N-terminal domain WRI_RS03610 PF06250 YhcG PDDEXK nuclease domain WRI_RS03640 PF00589 Phage integrase family WRI_RS03640 PF02899 Phage integrase, N-terminal SAM-like domain WRI_RS03645 PF07992 Pyridine nucleotide-disulphide oxidoreductase WRI_RS03645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain WRI_RS03685 PF07650 KH domain WRI_RS03685 PF01926 50S ribosome-binding GTPase WRI_RS03690 PF02322 Cytochrome bd terminal oxidase subunit II WRI_RS03695 PF01654 Cytochrome bd terminal oxidase subunit I WRI_RS03700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WRI_RS03700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WRI_RS03705 PF05193 Peptidase M16 inactive domain WRI_RS03705 PF00675 Insulinase (Peptidase family M16) WRI_RS03715 PF01702 Queuine tRNA-ribosyltransferase WRI_RS03730 PF00486 Transcriptional regulatory protein, C terminal WRI_RS03730 PF00072 Response regulator receiver domain WRI_RS03735 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WRI_RS03735 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WRI_RS03740 PF04608 Phosphatidylglycerophosphatase A WRI_RS03755 PF13085 2Fe-2S iron-sulfur cluster binding domain WRI_RS03760 PF02130 Uncharacterized protein family UPF0054 WRI_RS03770 PF00091 Tubulin/FtsZ family, GTPase domain WRI_RS03770 PF12327 FtsZ family, C-terminal domain WRI_RS03780 PF01078 Magnesium chelatase, subunit ChlI WRI_RS03780 PF13335 Magnesium chelatase, subunit ChlI C-terminal WRI_RS03845 PF00886 Ribosomal protein S16 WRI_RS03850 PF00348 Polyprenyl synthetase WRI_RS03855 PF01025 GrpE WRI_RS03860 PF00579 tRNA synthetases class I (W and Y) WRI_RS03870 PF00034 Cytochrome c WRI_RS03900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WRI_RS03900 PF03129 Anticodon binding domain WRI_RS03905 PF01648 4'-phosphopantetheinyl transferase superfamily WRI_RS03910 PF13244 Domain of unknown function (DUF4040) WRI_RS03910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WRI_RS03910 PF00361 Proton-conducting membrane transporter WRI_RS03930 PF01300 Telomere recombination WRI_RS03950 PF17191 RecG wedge domain WRI_RS03950 PF00270 DEAD/DEAH box helicase WRI_RS03950 PF00271 Helicase conserved C-terminal domain WRI_RS03995 PF01145 SPFH domain / Band 7 family WRI_RS04000 PF01145 SPFH domain / Band 7 family WRI_RS04005 PF13180 PDZ domain WRI_RS04035 PF00271 Helicase conserved C-terminal domain WRI_RS04035 PF04851 Type III restriction enzyme, res subunit WRI_RS04035 PF12344 Ultra-violet resistance protein B WRI_RS04035 PF17757 UvrB interaction domain WRI_RS04035 PF02151 UvrB/uvrC motif WRI_RS04050 PF02371 Transposase IS116/IS110/IS902 family WRI_RS04050 PF01548 Transposase WRI_RS04055 PF03918 Cytochrome C biogenesis protein WRI_RS04065 PF00111 2Fe-2S iron-sulfur cluster binding domain WRI_RS04070 PF08245 Mur ligase middle domain WRI_RS04100 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WRI_RS04105 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WRI_RS04110 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WRI_RS04115 PF04610 TrbL/VirB6 plasmid conjugal transfer protein WRI_RS04120 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WRI_RS04130 PF01921 tRNA synthetases class I (K) WRI_RS04135 PF02272 DHHA1 domain WRI_RS04135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WRI_RS04135 PF01411 tRNA synthetases class II (A) WRI_RS04145 PF01632 Ribosomal protein L35 WRI_RS04150 PF00453 Ribosomal protein L20 WRI_RS04155 PF02911 Formyl transferase, C-terminal domain WRI_RS04155 PF00551 Formyl transferase WRI_RS04160 PF02142 MGS-like domain WRI_RS04160 PF01808 AICARFT/IMPCHase bienzyme WRI_RS04170 PF01676 Metalloenzyme superfamily WRI_RS04170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WRI_RS04175 PF00698 Acyl transferase domain WRI_RS04180 PF01197 Ribosomal protein L31 WRI_RS04185 PF01513 ATP-NAD kinase WRI_RS04205 PF01138 3' exoribonuclease family, domain 1 WRI_RS04205 PF00013 KH domain WRI_RS04205 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WRI_RS04205 PF03725 3' exoribonuclease family, domain 2 WRI_RS04205 PF00575 S1 RNA binding domain WRI_RS04210 PF00312 Ribosomal protein S15 WRI_RS04215 PF16198 tRNA pseudouridylate synthase B C-terminal domain WRI_RS04215 PF01509 TruB family pseudouridylate synthase (N terminal domain) WRI_RS04260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WRI_RS04260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WRI_RS04265 PF10502 Signal peptidase, peptidase S26 WRI_RS04270 PF00012 Hsp70 protein WRI_RS04275 PF07743 HSCB C-terminal oligomerisation domain WRI_RS04280 PF01521 Iron-sulphur cluster biosynthesis WRI_RS04285 PF01592 NifU-like N terminal domain WRI_RS04290 PF02881 SRP54-type protein, helical bundle domain WRI_RS04290 PF00448 SRP54-type protein, GTPase domain WRI_RS04295 PF18073 Rubredoxin metal binding domain WRI_RS04325 PF00186 Dihydrofolate reductase WRI_RS04330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WRI_RS04330 PF00809 Pterin binding enzyme WRI_RS04340 PF03070 TENA/THI-4/PQQC family WRI_RS04350 PF00085 Thioredoxin WRI_RS04380 PF02769 AIR synthase related protein, C-terminal domain WRI_RS04380 PF00586 AIR synthase related protein, N-terminal domain WRI_RS04380 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain WRI_RS04390 PF17760 UvrA interaction domain WRI_RS04390 PF17755 UvrA DNA-binding domain WRI_RS04405 PF02875 Mur ligase family, glutamate ligase domain WRI_RS04405 PF08245 Mur ligase middle domain WRI_RS04410 PF01053 Cys/Met metabolism PLP-dependent enzyme WRI_RS04420 PF00012 Hsp70 protein WRI_RS04425 PF00575 S1 RNA binding domain WRI_RS04425 PF12111 Polyribonucleotide phosphorylase C terminal WRI_RS04425 PF10150 Ribonuclease E/G family WRI_RS04440 PF01297 Zinc-uptake complex component A periplasmic WRI_RS04445 PF00005 ABC transporter WRI_RS04450 PF03109 ABC1 family WRI_RS04460 PF08240 Alcohol dehydrogenase GroES-like domain WRI_RS04460 PF00107 Zinc-binding dehydrogenase WRI_RS04470 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 WRI_RS04475 PF01027 Inhibitor of apoptosis-promoting Bax1 WRI_RS04480 PF00588 SpoU rRNA Methylase family WRI_RS04480 PF08032 RNA 2'-O ribose methyltransferase substrate binding WRI_RS04490 PF02774 Semialdehyde dehydrogenase, dimerisation domain WRI_RS04490 PF01118 Semialdehyde dehydrogenase, NAD binding domain WRI_RS04505 PF13520 Amino acid permease WRI_RS04515 PF01842 ACT domain WRI_RS04515 PF00696 Amino acid kinase family WRI_RS04515 PF13840 ACT domain WRI_RS04570 PF00580 UvrD/REP helicase N-terminal domain WRI_RS04570 PF13361 UvrD-like helicase C-terminal domain WRI_RS04580 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WRI_RS04585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WRI_RS04590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WRI_RS04590 PF00361 Proton-conducting membrane transporter WRI_RS04595 PF00361 Proton-conducting membrane transporter WRI_RS04600 PF00361 Proton-conducting membrane transporter WRI_RS04605 PF02237 Biotin protein ligase C terminal domain WRI_RS04605 PF03099 Biotin/lipoate A/B protein ligase family WRI_RS04605 PF08279 HTH domain WRI_RS04610 PF03100 CcmE WRI_RS04640 PF10531 SLBB domain WRI_RS04640 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WRI_RS04640 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit WRI_RS04650 PF00707 Translation initiation factor IF-3, C-terminal domain WRI_RS04650 PF05198 Translation initiation factor IF-3, N-terminal domain WRI_RS04655 PF03129 Anticodon binding domain WRI_RS04655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WRI_RS04655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WRI_RS04665 PF12838 4Fe-4S dicluster domain WRI_RS04670 PF12631 MnmE helical domain WRI_RS04670 PF10396 GTP-binding protein TrmE N-terminus WRI_RS04670 PF01926 50S ribosome-binding GTPase WRI_RS04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase WRI_RS04685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WRI_RS04685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WRI_RS04690 PF02504 Fatty acid synthesis protein WRI_RS04695 PF01783 Ribosomal L32p protein family WRI_RS04700 PF02405 Permease MlaE WRI_RS04705 PF00005 ABC transporter WRI_RS04720 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WRI_RS04720 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain WRI_RS04720 PF13288 DXP reductoisomerase C-terminal domain WRI_RS04735 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS04745 PF00266 Aminotransferase class-V WRI_RS04750 PF01523 Putative modulator of DNA gyrase WRI_RS04780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WRI_RS04780 PF01367 5'-3' exonuclease, C-terminal SAM fold WRI_RS04780 PF00476 DNA polymerase family A WRI_RS04810 PF00557 Metallopeptidase family M24 WRI_RS04810 PF01321 Creatinase/Prolidase N-terminal domain WRI_RS04815 PF13932 GidA associated domain WRI_RS04815 PF01134 Glucose inhibited division protein A WRI_RS04825 PF03023 Lipid II flippase MurJ WRI_RS04875 PF04860 Phage portal protein WRI_RS04885 PF03099 Biotin/lipoate A/B protein ligase family WRI_RS04890 PF02016 LD-carboxypeptidase N-terminal domain WRI_RS04890 PF17676 LD-carboxypeptidase C-terminal domain WRI_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component WRI_RS04915 PF01245 Ribosomal protein L19 WRI_RS04920 PF01746 tRNA (Guanine-1)-methyltransferase WRI_RS04925 PF01259 SAICAR synthetase WRI_RS04930 PF00586 AIR synthase related protein, N-terminal domain WRI_RS04930 PF02769 AIR synthase related protein, C-terminal domain WRI_RS04945 PF00571 CBS domain WRI_RS04945 PF03471 Transporter associated domain WRI_RS04950 PF01208 Uroporphyrinogen decarboxylase (URO-D) WRI_RS04955 PF00155 Aminotransferase class I and II WRI_RS04965 PF00285 Citrate synthase, C-terminal domain WRI_RS04970 PF01649 Ribosomal protein S20 WRI_RS04980 PF00589 Phage integrase family WRI_RS04980 PF02899 Phage integrase, N-terminal SAM-like domain WRI_RS04990 PF01594 AI-2E family transporter WRI_RS05000 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WRI_RS05000 PF02542 YgbB family WRI_RS05005 PF02222 ATP-grasp domain WRI_RS05005 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain WRI_RS05010 PF04379 ApaG domain WRI_RS05020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS05060 PF00239 Resolvase, N terminal domain WRI_RS05060 PF02796 Helix-turn-helix domain of resolvase WRI_RS05175 PF00023 Ankyrin repeat WRI_RS05185 PF01555 DNA methylase WRI_RS05185 PF18755 Restriction Enzyme Adenine Methylase Associated WRI_RS05200 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS05200 PF01348 Type II intron maturase WRI_RS05220 PF00176 SNF2 family N-terminal domain WRI_RS05220 PF00271 Helicase conserved C-terminal domain WRI_RS05220 PF12419 SNF2 Helicase protein WRI_RS05225 PF14602 Hexapeptide repeat of succinyl-transferase WRI_RS05225 PF00132 Bacterial transferase hexapeptide (six repeats) WRI_RS05225 PF12804 MobA-like NTP transferase domain WRI_RS05230 PF16363 GDP-mannose 4,6 dehydratase WRI_RS05250 PF00005 ABC transporter WRI_RS05250 PF00664 ABC transporter transmembrane region WRI_RS05255 PF01212 Beta-eliminating lyase WRI_RS05260 PF01212 Beta-eliminating lyase WRI_RS05270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WRI_RS05270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WRI_RS05270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WRI_RS05275 PF00892 EamA-like transporter family WRI_RS05295 PF04002 RadC-like JAB domain WRI_RS05300 PF01381 Helix-turn-helix WRI_RS05310 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) WRI_RS05320 PF00528 Binding-protein-dependent transport system inner membrane component WRI_RS05325 PF00581 Rhodanese-like domain WRI_RS05325 PF17773 UPF0176 acylphosphatase like domain WRI_RS05330 PF01396 Topoisomerase DNA binding C4 zinc finger WRI_RS05330 PF13368 Topoisomerase C-terminal repeat WRI_RS05330 PF01131 DNA topoisomerase WRI_RS05330 PF01751 Toprim domain WRI_RS05350 PF00464 Serine hydroxymethyltransferase WRI_RS05380 PF07690 Major Facilitator Superfamily WRI_RS05415 PF01545 Cation efflux family WRI_RS05425 PF02660 Glycerol-3-phosphate acyltransferase WRI_RS05430 PF01235 Sodium:alanine symporter family WRI_RS05435 PF01235 Sodium:alanine symporter family WRI_RS05440 PF01066 CDP-alcohol phosphatidyltransferase WRI_RS05445 PF02666 Phosphatidylserine decarboxylase WRI_RS05450 PF00154 recA bacterial DNA recombination protein WRI_RS05475 PF00226 DnaJ domain WRI_RS05475 PF01556 DnaJ C terminal domain WRI_RS05475 PF00684 DnaJ central domain WRI_RS05480 PF08245 Mur ligase middle domain WRI_RS05480 PF02875 Mur ligase family, glutamate ligase domain WRI_RS05490 PF03364 Polyketide cyclase / dehydrase and lipid transport WRI_RS05495 PF13462 Thioredoxin WRI_RS05520 PF12169 DNA polymerase III subunits gamma and tau domain III WRI_RS05525 PF02575 YbaB/EbfC DNA-binding family WRI_RS05530 PF13505 Outer membrane protein beta-barrel domain WRI_RS05535 PF04545 Sigma-70, region 4 WRI_RS05535 PF00140 Sigma-70 factor, region 1.2 WRI_RS05535 PF04542 Sigma-70 region 2 WRI_RS05545 PF02768 DNA polymerase III beta subunit, C-terminal domain WRI_RS05545 PF02767 DNA polymerase III beta subunit, central domain WRI_RS05545 PF00712 DNA polymerase III beta subunit, N-terminal domain WRI_RS05555 PF01416 tRNA pseudouridine synthase WRI_RS05565 PF00033 Cytochrome b/b6/petB WRI_RS05565 PF02167 Cytochrome C1 family WRI_RS05565 PF00032 Cytochrome b(C-terminal)/b6/petD WRI_RS05570 PF00033 Cytochrome b/b6/petB WRI_RS05570 PF00032 Cytochrome b(C-terminal)/b6/petD WRI_RS05575 PF00226 DnaJ domain WRI_RS05575 PF00684 DnaJ central domain WRI_RS05575 PF01556 DnaJ C terminal domain WRI_RS05585 PF00684 DnaJ central domain WRI_RS05585 PF01556 DnaJ C terminal domain WRI_RS05585 PF00226 DnaJ domain WRI_RS05595 PF03129 Anticodon binding domain WRI_RS05595 PF13393 Histidyl-tRNA synthetase WRI_RS05600 PF01975 Survival protein SurE WRI_RS05605 PF00448 SRP54-type protein, GTPase domain WRI_RS05605 PF02881 SRP54-type protein, helical bundle domain WRI_RS05605 PF02978 Signal peptide binding domain WRI_RS05615 PF07992 Pyridine nucleotide-disulphide oxidoreductase WRI_RS05620 PF07977 FabA-like domain WRI_RS05630 PF01103 Surface antigen WRI_RS05630 PF07244 Surface antigen variable number repeat WRI_RS05635 PF02163 Peptidase family M50 WRI_RS05635 PF17820 PDZ domain WRI_RS05650 PF00216 Bacterial DNA-binding protein WRI_RS05655 PF00575 S1 RNA binding domain WRI_RS05660 PF02390 Putative methyltransferase WRI_RS05675 PF01039 Carboxyl transferase domain WRI_RS05685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain WRI_RS05685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain WRI_RS05685 PF06827 Zinc finger found in FPG and IleRS WRI_RS05690 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region WRI_RS05690 PF01243 Pyridoxamine 5'-phosphate oxidase WRI_RS05700 PF00753 Metallo-beta-lactamase superfamily WRI_RS05700 PF03772 Competence protein WRI_RS05710 PF00849 RNA pseudouridylate synthase WRI_RS05710 PF01479 S4 domain WRI_RS05715 PF01219 Prokaryotic diacylglycerol kinase WRI_RS05725 PF00162 Phosphoglycerate kinase WRI_RS05735 PF03060 Nitronate monooxygenase WRI_RS05750 PF03135 CagE, TrbE, VirB family, component of type IV transporter system WRI_RS05770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) WRI_RS05770 PF02817 e3 binding domain WRI_RS05770 PF00364 Biotin-requiring enzyme WRI_RS05785 PF02132 RecR protein WRI_RS05785 PF13662 Toprim domain WRI_RS05790 PF00334 Nucleoside diphosphate kinase WRI_RS05800 PF00762 Ferrochelatase WRI_RS05815 PF00227 Proteasome subunit WRI_RS05820 PF10431 C-terminal, D2-small domain, of ClpB protein WRI_RS05820 PF07724 AAA domain (Cdc48 subfamily) WRI_RS05820 PF00004 ATPase family associated with various cellular activities (AAA) WRI_RS05835 PF00348 Polyprenyl synthetase WRI_RS05840 PF00550 Phosphopantetheine attachment site WRI_RS05845 PF00109 Beta-ketoacyl synthase, N-terminal domain WRI_RS05845 PF02801 Beta-ketoacyl synthase, C-terminal domain WRI_RS05865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WRI_RS05870 PF02511 Thymidylate synthase complementing protein WRI_RS05900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain WRI_RS05900 PF00270 DEAD/DEAH box helicase WRI_RS05900 PF18074 Primosomal protein N C-terminal domain WRI_RS05900 PF17764 3′ DNA-binding domain (3′BD) WRI_RS05900 PF00271 Helicase conserved C-terminal domain WRI_RS05905 PF00355 Rieske [2Fe-2S] domain WRI_RS05905 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WRI_RS05910 PF03989 DNA gyrase C-terminal domain, beta-propeller WRI_RS05910 PF00521 DNA gyrase/topoisomerase IV, subunit A WRI_RS05930 PF02632 BioY family WRI_RS05935 PF00881 Nitroreductase family WRI_RS05940 PF01678 Diaminopimelate epimerase WRI_RS05945 PF00549 CoA-ligase WRI_RS05945 PF02629 CoA binding domain WRI_RS05950 PF00549 CoA-ligase WRI_RS05950 PF08442 ATP-grasp domain WRI_RS05965 PF04452 RNA methyltransferase WRI_RS05980 PF01218 Coproporphyrinogen III oxidase WRI_RS05985 PF00072 Response regulator receiver domain WRI_RS05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WRI_RS05985 PF13188 PAS domain WRI_RS05985 PF08448 PAS fold WRI_RS05985 PF00512 His Kinase A (phospho-acceptor) domain WRI_RS05990 PF13614 AAA domain WRI_RS05995 PF17762 HTH domain found in ParB protein WRI_RS05995 PF02195 ParB-like nuclease domain WRI_RS06010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WRI_RS06020 PF00483 Nucleotidyl transferase WRI_RS06020 PF01050 Mannose-6-phosphate isomerase WRI_RS06025 PF12704 MacB-like periplasmic core domain WRI_RS06025 PF02687 FtsX-like permease family WRI_RS06040 PF00231 ATP synthase WRI_RS06045 PF01523 Putative modulator of DNA gyrase WRI_RS06050 PF00313 'Cold-shock' DNA-binding domain WRI_RS06055 PF00271 Helicase conserved C-terminal domain WRI_RS06055 PF00270 DEAD/DEAH box helicase WRI_RS06060 PF02861 Clp amino terminal domain, pathogenicity island component WRI_RS06060 PF17871 AAA lid domain WRI_RS06060 PF10431 C-terminal, D2-small domain, of ClpB protein WRI_RS06060 PF07724 AAA domain (Cdc48 subfamily) WRI_RS06060 PF00004 ATPase family associated with various cellular activities (AAA) WRI_RS06070 PF01791 DeoC/LacD family aldolase WRI_RS06080 PF01180 Dihydroorotate dehydrogenase WRI_RS06085 PF14622 Ribonuclease-III-like WRI_RS06085 PF00035 Double-stranded RNA binding motif WRI_RS06095 PF13091 PLD-like domain WRI_RS06115 PF00210 Ferritin-like domain WRI_RS06120 PF02104 SURF1 family WRI_RS06125 PF02254 TrkA-N domain WRI_RS06125 PF00999 Sodium/hydrogen exchanger family WRI_RS06135 PF02223 Thymidylate kinase WRI_RS06145 PF06480 FtsH Extracellular WRI_RS06145 PF01434 Peptidase family M41 WRI_RS06145 PF17862 AAA+ lid domain WRI_RS06145 PF00004 ATPase family associated with various cellular activities (AAA) WRI_RS06150 PF01171 PP-loop family WRI_RS06155 PF00691 OmpA family WRI_RS06180 PF00719 Inorganic pyrophosphatase WRI_RS06190 PF00639 PPIC-type PPIASE domain WRI_RS06190 PF09312 SurA N-terminal domain WRI_RS06195 PF07992 Pyridine nucleotide-disulphide oxidoreductase WRI_RS06220 PF03717 Penicillin-binding Protein dimerisation domain WRI_RS06220 PF00905 Penicillin binding protein transpeptidase domain WRI_RS06225 PF02401 LytB protein WRI_RS06365 PF01258 Prokaryotic dksA/traR C4-type zinc finger WRI_RS06380 PF01926 50S ribosome-binding GTPase WRI_RS06380 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WRI_RS06390 PF03232 Ubiquinone biosynthesis protein COQ7 WRI_RS06395 PF00953 Glycosyl transferase family 4 WRI_RS06400 PF01351 Ribonuclease HII WRI_RS06420 PF00361 Proton-conducting membrane transporter WRI_RS06425 PF01098 Cell cycle protein WRI_RS06430 PF13537 Glutamine amidotransferase domain WRI_RS06430 PF00156 Phosphoribosyl transferase domain WRI_RS06435 PF02245 Methylpurine-DNA glycosylase (MPG) WRI_RS06440 PF05491 RuvB C-terminal winged helix domain WRI_RS06440 PF05496 Holliday junction DNA helicase RuvB P-loop domain WRI_RS06440 PF17864 RuvB AAA lid domain WRI_RS06445 PF01330 RuvA N terminal domain WRI_RS06445 PF07499 RuvA, C-terminal domain WRI_RS06455 PF00579 tRNA synthetases class I (W and Y) WRI_RS06475 PF00293 NUDIX domain WRI_RS06480 PF01026 TatD related DNase WRI_RS06485 PF00056 lactate/malate dehydrogenase, NAD binding domain WRI_RS06485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WRI_RS06490 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WRI_RS06495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WRI_RS06500 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WRI_RS06505 PF01230 HIT domain WRI_RS06520 PF08245 Mur ligase middle domain WRI_RS06520 PF01225 Mur ligase family, catalytic domain WRI_RS06520 PF02875 Mur ligase family, glutamate ligase domain WRI_RS06525 PF08338 Domain of unknown function (DUF1731) WRI_RS06525 PF01370 NAD dependent epimerase/dehydratase family WRI_RS06535 PF00183 Hsp90 protein WRI_RS06550 PF00155 Aminotransferase class I and II WRI_RS06560 PF01132 Elongation factor P (EF-P) OB domain WRI_RS06560 PF08207 Elongation factor P (EF-P) KOW-like domain WRI_RS06560 PF09285 Elongation factor P, C-terminal WRI_RS06565 PF01782 RimM N-terminal domain WRI_RS06565 PF05239 PRC-barrel domain WRI_RS06570 PF00202 Aminotransferase class-III WRI_RS06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WRI_RS06575 PF00512 His Kinase A (phospho-acceptor) domain WRI_RS06575 PF00989 PAS fold WRI_RS06580 PF00578 AhpC/TSA family WRI_RS06585 PF02463 RecF/RecN/SMC N terminal domain WRI_RS06610 PF03631 Virulence factor BrkB WRI_RS06625 PF02142 MGS-like domain WRI_RS06625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WRI_RS06625 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WRI_RS06645 PF03979 Sigma-70 factor, region 1.1 WRI_RS06645 PF04545 Sigma-70, region 4 WRI_RS06645 PF00140 Sigma-70 factor, region 1.2 WRI_RS06645 PF04542 Sigma-70 region 2 WRI_RS06645 PF04539 Sigma-70 region 3 WRI_RS06645 PF04546 Sigma-70, non-essential region WRI_RS06650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WRI_RS06660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WRI_RS06660 PF00361 Proton-conducting membrane transporter WRI_RS06660 PF13244 Domain of unknown function (DUF4040) WRI_RS06665 PF03334 Na+/H+ antiporter subunit WRI_RS06675 PF01192 RNA polymerase Rpb6 WRI_RS06685 PF00731 AIR carboxylase WRI_RS06690 PF08676 MutL C terminal dimerisation domain WRI_RS06690 PF01119 DNA mismatch repair protein, C-terminal domain WRI_RS06695 PF00676 Dehydrogenase E1 component WRI_RS06695 PF02779 Transketolase, pyrimidine binding domain WRI_RS06695 PF16870 2-oxoglutarate dehydrogenase C-terminal WRI_RS06695 PF16078 2-oxoglutarate dehydrogenase N-terminus WRI_RS06715 PF13784 Fic/DOC family N-terminal WRI_RS06715 PF02661 Fic/DOC family WRI_RS06720 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WRI_RS06740 PF01040 UbiA prenyltransferase family WRI_RS06745 PF02033 Ribosome-binding factor A WRI_RS06750 PF00009 Elongation factor Tu GTP binding domain WRI_RS06750 PF04760 Translation initiation factor IF-2, N-terminal region WRI_RS06750 PF11987 Translation-initiation factor 2 WRI_RS06755 PF13184 NusA-like KH domain WRI_RS06755 PF08529 NusA N-terminal domain WRI_RS06755 PF00575 S1 RNA binding domain WRI_RS06760 PF00873 AcrB/AcrD/AcrF family WRI_RS06770 PF00120 Glutamine synthetase, catalytic domain WRI_RS06805 PF01434 Peptidase family M41 WRI_RS06805 PF06480 FtsH Extracellular WRI_RS06805 PF17862 AAA+ lid domain WRI_RS06805 PF00004 ATPase family associated with various cellular activities (AAA)