WS_RS00005 PF00308 Bacterial dnaA protein WS_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix WS_RS00005 PF11638 DnaA N-terminal domain WS_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain WS_RS00010 PF02767 DNA polymerase III beta subunit, central domain WS_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain WS_RS00015 PF00204 DNA gyrase B WS_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus WS_RS00015 PF01751 Toprim domain WS_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS00020 PF14489 QueF-like protein WS_RS00025 PF02660 WS_RS00025 WS_RS00030 PF02152 Dihydroneopterin aldolase WS_RS00035 PF02028 BCCT family transporter WS_RS00040 PF00582 Universal stress protein family WS_RS00050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WS_RS00055 PF14827 Sensory domain of two-component sensor kinase WS_RS00060 PF00072 Response regulator receiver domain WS_RS00060 PF00486 Transcriptional regulatory protein, C terminal WS_RS00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS00070 PF07556 WS_RS00070 WS_RS00075 PF00571 CBS domain WS_RS00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS00090 PF10672 S-adenosylmethionine-dependent methyltransferase WS_RS00100 PF08901 WS_RS00100 WS_RS00105 PF01966 HD domain WS_RS00105 PF03445 WS_RS00105 WS_RS00105 PF08335 GlnD PII-uridylyltransferase WS_RS00110 PF01380 SIS domain WS_RS00110 PF13522 Glutamine amidotransferase domain WS_RS00115 PF00990 GGDEF domain WS_RS00120 PF00266 Aminotransferase class-V WS_RS00125 PF01370 NAD dependent epimerase/dehydratase family WS_RS00135 PF02634 FdhD/NarQ family WS_RS00140 PF01292 Prokaryotic cytochrome b561 WS_RS00145 PF13247 4Fe-4S dicluster domain WS_RS00150 PF00384 Molybdopterin oxidoreductase WS_RS00150 PF01568 Molydopterin dinucleotide binding domain WS_RS00150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS00160 PF03795 YCII-related domain WS_RS00165 PF13187 4Fe-4S dicluster domain WS_RS00170 PF00583 Acetyltransferase (GNAT) family WS_RS00175 PF05082 Rop-like WS_RS00180 PF02719 Polysaccharide biosynthesis protein WS_RS00185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WS_RS00190 PF00132 Bacterial transferase hexapeptide (six repeats) WS_RS00195 PF02397 WS_RS00195 WS_RS00200 PF00534 Glycosyl transferases group 1 WS_RS00200 PF13477 Glycosyl transferase 4-like WS_RS00205 PF00733 Asparagine synthase WS_RS00205 PF13537 Glutamine amidotransferase domain WS_RS00210 PF02516 Oligosaccharyl transferase STT3 subunit WS_RS00215 PF00534 Glycosyl transferases group 1 WS_RS00215 PF13439 Glycosyltransferase Family 4 WS_RS00220 PF00733 Asparagine synthase WS_RS00220 PF13537 Glutamine amidotransferase domain WS_RS00225 PF13439 Glycosyltransferase Family 4 WS_RS00225 PF13692 Glycosyl transferases group 1 WS_RS00230 PF10096 WS_RS00230 WS_RS00240 PF00534 Glycosyl transferases group 1 WS_RS00240 PF13439 Glycosyltransferase Family 4 WS_RS00245 PF00535 Glycosyl transferase family 2 WS_RS00250 PF00005 ABC transporter WS_RS00250 PF00664 ABC transporter transmembrane region WS_RS00255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WS_RS00255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WS_RS00255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WS_RS00260 PF00072 Response regulator receiver domain WS_RS00260 PF00486 Transcriptional regulatory protein, C terminal WS_RS00265 PF04085 rod shape-determining protein MreC WS_RS00270 PF06723 MreB/Mbl protein WS_RS00275 PF06689 ClpX C4-type zinc finger WS_RS00275 PF07724 AAA domain (Cdc48 subfamily) WS_RS00275 PF10431 C-terminal, D2-small domain, of ClpB protein WS_RS00280 PF00132 Bacterial transferase hexapeptide (six repeats) WS_RS00280 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 WS_RS00285 PF07977 FabA-like domain WS_RS00290 PF02677 WS_RS00290 WS_RS00295 PF04055 Radical SAM superfamily WS_RS00305 PF00977 Histidine biosynthesis protein WS_RS00310 PF00398 Ribosomal RNA adenine dimethylase WS_RS00315 PF00753 Metallo-beta-lactamase superfamily WS_RS00315 PF07521 RNA-metabolising metallo-beta-lactamase WS_RS00320 PF00571 CBS domain WS_RS00320 PF01380 SIS domain WS_RS00325 PF10398 Protein of unknown function (DUF2443) WS_RS00330 PF09924 Uncharacterized conserved protein (DUF2156) WS_RS00335 PF00583 Acetyltransferase (GNAT) family WS_RS00340 PF00013 KH domain WS_RS00340 PF01966 HD domain WS_RS00340 PF12072 WS_RS00340 WS_RS00345 PF01812 5-formyltetrahydrofolate cyclo-ligase family WS_RS00350 PF00578 AhpC/TSA family WS_RS00355 PF00448 SRP54-type protein, GTPase domain WS_RS00360 PF13481 AAA domain WS_RS00360 PF13541 Subunit ChlI of Mg-chelatase WS_RS00365 PF06518 Protein of unknown function (DUF1104) WS_RS00370 PF00072 Response regulator receiver domain WS_RS00370 PF00486 Transcriptional regulatory protein, C terminal WS_RS00375 PF00512 His Kinase A (phospho-acceptor) domain WS_RS00375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS00380 PF14358 WS_RS00380 WS_RS00385 PF00795 Carbon-nitrogen hydrolase WS_RS00390 PF04461 Protein of unknown function (DUF520) WS_RS00395 PF02674 WS_RS00395 WS_RS00400 PF00152 tRNA synthetases class II (D, K and N) WS_RS00400 PF01336 OB-fold nucleic acid binding domain WS_RS00405 PF00464 Serine hydroxymethyltransferase WS_RS00410 PF08966 Domain of unknown function (DUF1882) WS_RS00415 PF05036 Sporulation related domain WS_RS00420 PF00425 chorismate binding enzyme WS_RS00420 PF04715 Anthranilate synthase component I, N terminal region WS_RS00425 PF09624 WS_RS00425 WS_RS00430 PF01502 Phosphoribosyl-AMP cyclohydrolase WS_RS00430 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase WS_RS00435 PF01145 SPFH domain / Band 7 family WS_RS00440 PF01063 Aminotransferase class IV WS_RS00445 PF01370 NAD dependent epimerase/dehydratase family WS_RS00445 PF08338 Domain of unknown function (DUF1731) WS_RS00450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS00460 PF01580 FtsK/SpoIIIE family WS_RS00460 PF09397 Ftsk gamma domain WS_RS00460 PF13491 WS_RS00460 WS_RS00470 PF03547 WS_RS00470 WS_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) WS_RS00480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD WS_RS00485 PF01842 ACT domain WS_RS00485 PF10369 Small subunit of acetolactate synthase WS_RS00490 PF00205 Thiamine pyrophosphate enzyme, central domain WS_RS00490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WS_RS00490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain WS_RS00495 PF02541 Ppx/GppA phosphatase family WS_RS00500 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ WS_RS00505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA WS_RS00520 PF00005 ABC transporter WS_RS00525 PF00472 RF-1 domain WS_RS00525 PF03462 PCRF domain WS_RS00530 PF02569 Pantoate-beta-alanine ligase WS_RS00535 PF04055 Radical SAM superfamily WS_RS00540 PF12625 WS_RS00540 WS_RS00540 PF12833 Helix-turn-helix domain WS_RS00545 PF00384 Molybdopterin oxidoreductase WS_RS00545 PF01568 Molydopterin dinucleotide binding domain WS_RS00545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS00545 PF10518 TAT (twin-arginine translocation) pathway signal sequence WS_RS00550 PF13247 4Fe-4S dicluster domain WS_RS00555 PF03916 WS_RS00555 WS_RS00560 PF00072 Response regulator receiver domain WS_RS00560 PF00486 Transcriptional regulatory protein, C terminal WS_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS00570 PF03264 NapC/NirT cytochrome c family, N-terminal region WS_RS00575 PF14537 Cytochrome c3 WS_RS00580 PF00890 FAD binding domain WS_RS00585 PF00563 EAL domain WS_RS00585 PF00990 GGDEF domain WS_RS00585 PF14827 Sensory domain of two-component sensor kinase WS_RS00590 PF00384 Molybdopterin oxidoreductase WS_RS00590 PF01568 Molydopterin dinucleotide binding domain WS_RS00590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS00595 PF00892 EamA-like transporter family WS_RS00600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS00600 PF13682 Chemoreceptor zinc-binding domain WS_RS00625 PF03553 WS_RS00625 WS_RS00625 PF13726 WS_RS00625 WS_RS00630 PF00920 Dehydratase family WS_RS00635 PF13380 CoA binding domain WS_RS00640 PF00291 Pyridoxal-phosphate dependent enzyme WS_RS00650 PF07963 Prokaryotic N-terminal methylation motif WS_RS00680 PF12836 Helix-hairpin-helix motif WS_RS00685 PF00731 AIR carboxylase WS_RS00690 PF02540 NAD synthase WS_RS00695 PF01969 Protein of unknown function DUF111 WS_RS00700 PF09861 Domain of unknown function (DUF2088) WS_RS00705 PF01758 Sodium Bile acid symporter family WS_RS00715 PF00849 RNA pseudouridylate synthase WS_RS00715 PF01479 S4 domain WS_RS00725 PF02390 Putative methyltransferase WS_RS00730 PF00005 ABC transporter WS_RS00740 PF01551 Peptidase family M23 WS_RS00745 PF03646 FlaG protein WS_RS00750 PF02465 WS_RS00750 WS_RS00750 PF07195 WS_RS00750 WS_RS00755 PF02561 Flagellar protein FliS WS_RS00765 PF09924 Uncharacterized conserved protein (DUF2156) WS_RS00775 PF01258 Prokaryotic dksA/traR C4-type zinc finger WS_RS00780 PF02590 Predicted SPOUT methyltransferase WS_RS00785 PF01039 Carboxyl transferase domain WS_RS00790 PF00459 Inositol monophosphatase family WS_RS00795 PF13114 WS_RS00795 WS_RS00800 PF09312 SurA N-terminal domain WS_RS00805 PF00132 Bacterial transferase hexapeptide (six repeats) WS_RS00805 PF14602 Hexapeptide repeat of succinyl-transferase WS_RS00805 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal WS_RS00810 PF01207 Dihydrouridine synthase (Dus) WS_RS00815 PF00258 Flavodoxin WS_RS00815 PF00753 Metallo-beta-lactamase superfamily WS_RS00820 PF06865 Protein of unknown function (DUF1255) WS_RS00825 PF06942 WS_RS00825 WS_RS00830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WS_RS00835 PF03435 Saccharopine dehydrogenase WS_RS00835 PF16653 WS_RS00835 WS_RS00840 PF00873 AcrB/AcrD/AcrF family WS_RS00850 PF01795 MraW methylase family WS_RS00855 PF00390 Malic enzyme, N-terminal domain WS_RS00855 PF03949 Malic enzyme, NAD binding domain WS_RS00895 PF02464 Competence-damaged protein WS_RS00900 PF03976 Polyphosphate kinase 2 (PPK2) WS_RS00905 PF00133 tRNA synthetases class I (I, L, M and V) WS_RS00905 PF08264 Anticodon-binding domain of tRNA WS_RS00910 PF00115 Cytochrome C and Quinol oxidase polypeptide I WS_RS00915 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO WS_RS00920 PF05545 WS_RS00920 WS_RS00925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WS_RS00925 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP WS_RS00930 PF13179 WS_RS00930 WS_RS00940 PF05751 WS_RS00940 WS_RS00945 PF00750 tRNA synthetases class I (R) WS_RS00945 PF03485 Arginyl tRNA synthetase N terminal domain WS_RS00945 PF05746 DALR anticodon binding domain WS_RS00950 PF02416 mttA/Hcf106 family WS_RS00955 PF00625 Guanylate kinase WS_RS00965 PF13091 PLD-like domain WS_RS00970 PF01311 WS_RS00970 WS_RS00975 PF00005 ABC transporter WS_RS00980 PF00889 Elongation factor TS WS_RS00985 PF00318 Ribosomal protein S2 WS_RS00990 PF00578 AhpC/TSA family WS_RS00995 PF09335 WS_RS00995 WS_RS01000 PF02754 WS_RS01000 WS_RS01000 PF13534 4Fe-4S dicluster domain WS_RS01005 PF09335 WS_RS01005 WS_RS01010 PF00581 Rhodanese-like domain WS_RS01015 PF00860 Permease family WS_RS01020 PF02606 Tetraacyldisaccharide-1-P 4'-kinase WS_RS01025 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WS_RS01030 PF02540 NAD synthase WS_RS01035 PF00691 OmpA family WS_RS01035 PF05736 OprF membrane domain WS_RS01040 PF13690 Chemotaxis phosphatase CheX WS_RS01045 PF02092 WS_RS01045 WS_RS01055 PF00072 Response regulator receiver domain WS_RS01055 PF00512 His Kinase A (phospho-acceptor) domain WS_RS01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS01055 PF13426 PAS domain WS_RS01060 PF00072 Response regulator receiver domain WS_RS01060 PF01627 Hpt domain WS_RS01065 PF00072 Response regulator receiver domain WS_RS01080 PF00133 tRNA synthetases class I (I, L, M and V) WS_RS01080 PF01588 Putative tRNA binding domain WS_RS01080 PF09334 tRNA synthetases class I (M) WS_RS01090 PF00316 Fructose-1-6-bisphosphatase WS_RS01095 PF00834 Ribulose-phosphate 3 epimerase family WS_RS01100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase WS_RS01105 PF00929 Exonuclease WS_RS01110 PF05175 Methyltransferase small domain WS_RS01115 PF01435 Peptidase family M48 WS_RS01115 PF16491 WS_RS01115 WS_RS01120 PF00117 Glutamine amidotransferase class-I WS_RS01120 PF06418 CTP synthase N-terminus WS_RS01125 PF01368 DHH family WS_RS01125 PF02272 DHHA1 domain WS_RS01130 PF07992 Pyridine nucleotide-disulphide oxidoreductase WS_RS01140 PF16522 WS_RS01140 WS_RS01145 PF17033 WS_RS01145 WS_RS01145 PF17129 WS_RS01145 WS_RS01150 PF00091 Tubulin/FtsZ family, GTPase domain WS_RS01150 PF12327 FtsZ family, C-terminal domain WS_RS01155 PF02491 SHS2 domain inserted in FTSA WS_RS01155 PF14450 Cell division protein FtsA WS_RS01160 PF13145 PPIC-type PPIASE domain WS_RS01160 PF13624 SurA N-terminal domain WS_RS01165 PF00202 Aminotransferase class-III WS_RS01170 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) WS_RS01175 PF00501 AMP-binding enzyme WS_RS01175 PF13193 AMP-binding enzyme C-terminal domain WS_RS01180 PF00696 Amino acid kinase family WS_RS01185 PF01192 RNA polymerase Rpb6 WS_RS01190 PF02824 TGS domain WS_RS01190 PF04607 Region found in RelA / SpoT proteins WS_RS01190 PF13328 HD domain WS_RS01195 PF00579 tRNA synthetases class I (W and Y) WS_RS01195 PF01479 S4 domain WS_RS01200 PF03060 Nitronate monooxygenase WS_RS01205 PF01520 N-acetylmuramoyl-L-alanine amidase WS_RS01215 PF02621 Menaquinone biosynthesis WS_RS01225 PF00005 ABC transporter WS_RS01225 PF12848 ABC transporter WS_RS01225 PF16326 WS_RS01225 WS_RS01230 PF04932 WS_RS01230 WS_RS01250 PF00534 Glycosyl transferases group 1 WS_RS01250 PF13439 Glycosyltransferase Family 4 WS_RS01255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WS_RS01260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WS_RS01265 PF00534 Glycosyl transferases group 1 WS_RS01265 PF13439 Glycosyltransferase Family 4 WS_RS01270 PF00005 ABC transporter WS_RS01270 PF00664 ABC transporter transmembrane region WS_RS01275 PF00072 Response regulator receiver domain WS_RS01275 PF01584 CheW-like domain WS_RS01280 PF09674 WS_RS01280 WS_RS01285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WS_RS01295 PF04316 Anti-sigma-28 factor, FlgM WS_RS01305 PF01551 Peptidase family M23 WS_RS01310 PF00293 NUDIX domain WS_RS01315 PF15436 WS_RS01315 WS_RS01320 PF01565 FAD binding domain WS_RS01320 PF02913 FAD linked oxidases, C-terminal domain WS_RS01330 PF01717 Cobalamin-independent synthase, Catalytic domain WS_RS01330 PF08267 Cobalamin-independent synthase, N-terminal domain WS_RS01335 PF03824 WS_RS01335 WS_RS01335 PF06226 WS_RS01335 WS_RS01340 PF01464 Transglycosylase SLT domain WS_RS01345 PF02325 WS_RS01345 WS_RS01350 PF00749 tRNA synthetases class I (E and Q), catalytic domain WS_RS01355 PF00892 EamA-like transporter family WS_RS01360 PF00005 ABC transporter WS_RS01365 PF00497 Bacterial extracellular solute-binding proteins, family 3 WS_RS01370 PF00497 Bacterial extracellular solute-binding proteins, family 3 WS_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS01380 PF02743 Cache domain WS_RS01385 PF00665 Integrase core domain WS_RS01385 PF01527 Transposase WS_RS01385 PF13276 WS_RS01385 WS_RS01390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS01405 PF04454 Encapsulating protein for peroxidase WS_RS01410 PF12833 Helix-turn-helix domain WS_RS01415 PF00593 TonB dependent receptor WS_RS01415 PF07715 TonB-dependent Receptor Plug Domain WS_RS01420 PF13531 Bacterial extracellular solute-binding protein WS_RS01430 PF09335 WS_RS01430 WS_RS01435 PF00691 OmpA family WS_RS01435 PF13677 WS_RS01435 WS_RS01440 PF00484 Carbonic anhydrase WS_RS01445 PF00793 DAHP synthetase I family WS_RS01450 PF00885 6,7-dimethyl-8-ribityllumazine synthase WS_RS01455 PF01029 NusB family WS_RS01460 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family WS_RS01465 PF00753 Metallo-beta-lactamase superfamily WS_RS01470 PF01966 HD domain WS_RS01470 PF13286 Phosphohydrolase-associated domain WS_RS01475 PF13584 WS_RS01475 WS_RS01480 PF13437 HlyD family secretion protein WS_RS01485 PF00202 Aminotransferase class-III WS_RS01490 PF02321 Outer membrane efflux protein WS_RS01495 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase WS_RS01500 PF00512 His Kinase A (phospho-acceptor) domain WS_RS01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS01505 PF00072 Response regulator receiver domain WS_RS01505 PF00486 Transcriptional regulatory protein, C terminal WS_RS01510 PF00717 Peptidase S24-like WS_RS01515 PF00118 TCP-1/cpn60 chaperonin family WS_RS01520 PF00166 Chaperonin 10 Kd subunit WS_RS01525 PF00155 Aminotransferase class I and II WS_RS01530 PF00579 tRNA synthetases class I (W and Y) WS_RS01535 PF13649 Methyltransferase domain WS_RS01540 PF03840 Preprotein translocase SecG subunit WS_RS01545 PF01765 Ribosome recycling factor WS_RS01550 PF00156 Phosphoribosyl transferase domain WS_RS01555 PF06271 WS_RS01555 WS_RS01560 PF12832 MFS_1 like family WS_RS01565 PF00119 ATP synthase A chain WS_RS01575 PF02581 Thiamine monophosphate synthase/TENI WS_RS01605 PF12836 Helix-hairpin-helix motif WS_RS01610 PF03033 Glycosyltransferase family 28 N-terminal domain WS_RS01610 PF04101 Glycosyltransferase family 28 C-terminal domain WS_RS01615 PF01411 tRNA synthetases class II (A) WS_RS01615 PF02272 DHHA1 domain WS_RS01615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WS_RS01620 PF02545 Maf-like protein WS_RS01625 PF03597 WS_RS01625 WS_RS01630 PF13738 Pyridine nucleotide-disulphide oxidoreductase WS_RS01635 PF00830 Ribosomal L28 family WS_RS01640 PF02080 TrkA-C domain WS_RS01640 PF02254 TrkA-N domain WS_RS01645 PF01960 ArgJ family WS_RS01650 PF04325 Protein of unknown function (DUF465) WS_RS01655 PF00800 Prephenate dehydratase WS_RS01655 PF01817 Chorismate mutase type II WS_RS01660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WS_RS01660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WS_RS01670 PF13500 AAA domain WS_RS01675 PF02617 ATP-dependent Clp protease adaptor protein ClpS WS_RS01680 PF00004 ATPase family associated with various cellular activities (AAA) WS_RS01680 PF02861 Clp amino terminal domain WS_RS01680 PF07724 AAA domain (Cdc48 subfamily) WS_RS01680 PF10431 C-terminal, D2-small domain, of ClpB protein WS_RS01685 PF03588 Leucyl/phenylalanyl-tRNA protein transferase WS_RS01690 PF05673 Protein of unknown function (DUF815) WS_RS01695 PF00483 Nucleotidyl transferase WS_RS01705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WS_RS01710 PF00899 ThiF family WS_RS01715 PF00072 Response regulator receiver domain WS_RS01715 PF00990 GGDEF domain WS_RS01720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WS_RS01720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WS_RS01725 PF01027 Inhibitor of apoptosis-promoting Bax1 WS_RS01735 PF02153 Prephenate dehydrogenase WS_RS01740 PF01103 Surface antigen WS_RS01740 PF07244 Surface antigen variable number repeat WS_RS01745 PF04055 Radical SAM superfamily WS_RS01750 PF00675 Insulinase (Peptidase family M16) WS_RS01750 PF05193 Peptidase M16 inactive domain WS_RS01755 PF00271 Helicase conserved C-terminal domain WS_RS01755 PF04851 Type III restriction enzyme, res subunit WS_RS01760 PF00772 DnaB-like helicase N terminal domain WS_RS01760 PF03796 DnaB-like helicase C terminal domain WS_RS01765 PF03772 WS_RS01765 WS_RS01770 PF04367 WS_RS01770 WS_RS01775 PF01040 UbiA prenyltransferase family WS_RS01790 PF02592 WS_RS01790 WS_RS01800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WS_RS01810 PF00521 DNA gyrase/topoisomerase IV, subunit A WS_RS01810 PF03989 DNA gyrase C-terminal domain, beta-propeller WS_RS01820 PF00072 Response regulator receiver domain WS_RS01820 PF00158 Sigma-54 interaction domain WS_RS01825 PF01118 Semialdehyde dehydrogenase, NAD binding domain WS_RS01825 PF02774 Semialdehyde dehydrogenase, dimerisation domain WS_RS01830 PF03350 WS_RS01830 WS_RS01835 PF01208 Uroporphyrinogen decarboxylase (URO-D) WS_RS01840 PF04290 WS_RS01840 WS_RS01845 PF06808 WS_RS01845 WS_RS01850 PF03480 Bacterial extracellular solute-binding protein, family 7 WS_RS01855 PF04055 Radical SAM superfamily WS_RS01855 PF13353 4Fe-4S single cluster domain WS_RS01865 PF04402 Protein of unknown function (DUF541) WS_RS01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS01875 PF11845 WS_RS01875 WS_RS01885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WS_RS01885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase WS_RS01890 PF13247 4Fe-4S dicluster domain WS_RS01895 PF03916 WS_RS01895 WS_RS01900 PF01578 WS_RS01900 WS_RS01900 PF05140 WS_RS01900 WS_RS01905 PF03653 WS_RS01905 WS_RS01910 PF08238 Sel1 repeat WS_RS01915 PF05573 NosL WS_RS01925 PF02687 WS_RS01925 WS_RS01930 PF00005 ABC transporter WS_RS01945 PF13899 Thioredoxin-like WS_RS01950 PF03473 MOSC domain WS_RS01955 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 WS_RS01955 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain WS_RS01960 PF02597 ThiS family WS_RS01965 PF00899 ThiF family WS_RS01970 PF00990 GGDEF domain WS_RS01970 PF03924 CHASE domain WS_RS01975 PF01243 Pyridoxamine 5'-phosphate oxidase WS_RS01980 PF00375 Sodium:dicarboxylate symporter family WS_RS01985 PF00155 Aminotransferase class I and II WS_RS01990 PF05977 Transmembrane secretion effector WS_RS01995 PF12900 Pyridoxamine 5'-phosphate oxidase WS_RS02005 PF03109 WS_RS02005 WS_RS02010 PF03547 WS_RS02010 WS_RS02015 PF00543 Nitrogen regulatory protein P-II WS_RS02020 PF00909 Ammonium Transporter Family WS_RS02025 PF16576 WS_RS02025 WS_RS02030 PF00873 AcrB/AcrD/AcrF family WS_RS02035 PF02321 Outer membrane efflux protein WS_RS02040 PF00072 Response regulator receiver domain WS_RS02040 PF00990 GGDEF domain WS_RS02040 PF13426 PAS domain WS_RS02050 PF00206 Lyase WS_RS02050 PF10397 Adenylosuccinate lyase C-terminus WS_RS02055 PF00849 RNA pseudouridylate synthase WS_RS02060 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) WS_RS02065 PF00795 Carbon-nitrogen hydrolase WS_RS02070 PF00268 Ribonucleotide reductase, small chain WS_RS02075 PF00122 E1-E2 ATPase WS_RS02075 PF00403 Heavy-metal-associated domain WS_RS02075 PF00702 haloacid dehalogenase-like hydrolase WS_RS02080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily WS_RS02085 PF13561 Enoyl-(Acyl carrier protein) reductase WS_RS02090 PF00121 Triosephosphate isomerase WS_RS02095 PF13432 Tetratricopeptide repeat WS_RS02095 PF13519 von Willebrand factor type A domain WS_RS02095 PF14559 Tetratricopeptide repeat WS_RS02100 PF13519 von Willebrand factor type A domain WS_RS02110 PF00476 DNA polymerase family A WS_RS02110 PF01367 5'-3' exonuclease, C-terminal SAM fold WS_RS02110 PF01612 3'-5' exonuclease WS_RS02110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain WS_RS02125 PF00924 Mechanosensitive ion channel WS_RS02130 PF01230 HIT domain WS_RS02135 PF08245 Mur ligase middle domain WS_RS02140 PF12697 Alpha/beta hydrolase family WS_RS02145 PF01820 D-ala D-ala ligase N-terminus WS_RS02145 PF07478 D-ala D-ala ligase C-terminus WS_RS02150 PF02624 YcaO-like family WS_RS02155 PF01330 RuvA N terminal domain WS_RS02155 PF07499 RuvA, C-terminal domain WS_RS02155 PF14520 Helix-hairpin-helix domain WS_RS02160 PF03961 WS_RS02160 WS_RS02165 PF03023 WS_RS02165 WS_RS02170 PF01406 tRNA synthetases class I (C) catalytic domain WS_RS02175 PF01197 Ribosomal protein L31 WS_RS02180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WS_RS02185 PF00588 SpoU rRNA Methylase family WS_RS02185 PF08032 RNA 2'-O ribose methyltransferase substrate binding WS_RS02200 PF00155 Aminotransferase class I and II WS_RS02205 PF00742 Homoserine dehydrogenase WS_RS02205 PF01842 ACT domain WS_RS02205 PF03447 Homoserine dehydrogenase, NAD binding domain WS_RS02210 PF02021 Uncharacterised protein family UPF0102 WS_RS02215 PF00085 Thioredoxin WS_RS02225 PF07992 Pyridine nucleotide-disulphide oxidoreductase WS_RS02230 PF01113 Dihydrodipicolinate reductase, N-terminus WS_RS02230 PF05173 Dihydrodipicolinate reductase, C-terminus WS_RS02235 PF00156 Phosphoribosyl transferase domain WS_RS02235 PF13537 Glutamine amidotransferase domain WS_RS02240 PF04055 Radical SAM superfamily WS_RS02240 PF16199 WS_RS02240 WS_RS02245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02270 PF00009 Elongation factor Tu GTP binding domain WS_RS02270 PF03143 Elongation factor Tu C-terminal domain WS_RS02270 PF03144 Elongation factor Tu domain 2 WS_RS02275 PF00471 Ribosomal protein L33 WS_RS02285 PF00584 SecE/Sec61-gamma subunits of protein translocation complex WS_RS02290 PF00467 KOW motif WS_RS02290 PF02357 Transcription termination factor nusG WS_RS02295 PF00298 Ribosomal protein L11, RNA binding domain WS_RS02295 PF03946 Ribosomal protein L11, N-terminal domain WS_RS02300 PF00687 Ribosomal protein L1p/L10e family WS_RS02305 PF00466 Ribosomal protein L10 WS_RS02310 PF00542 Ribosomal protein L7/L12 C-terminal domain WS_RS02310 PF16320 WS_RS02310 WS_RS02315 PF00562 RNA polymerase Rpb2, domain 6 WS_RS02315 PF00623 RNA polymerase Rpb1, domain 2 WS_RS02315 PF04560 RNA polymerase Rpb2, domain 7 WS_RS02315 PF04561 RNA polymerase Rpb2, domain 2 WS_RS02315 PF04563 RNA polymerase beta subunit WS_RS02315 PF04565 RNA polymerase Rpb2, domain 3 WS_RS02315 PF04983 RNA polymerase Rpb1, domain 3 WS_RS02315 PF04997 RNA polymerase Rpb1, domain 1 WS_RS02315 PF04998 RNA polymerase Rpb1, domain 5 WS_RS02315 PF05000 RNA polymerase Rpb1, domain 4 WS_RS02315 PF10385 RNA polymerase beta subunit external 1 domain WS_RS02320 PF00164 Ribosomal protein S12/S23 WS_RS02325 PF00177 Ribosomal protein S7p/S5e WS_RS02330 PF00009 Elongation factor Tu GTP binding domain WS_RS02330 PF00679 Elongation factor G C-terminus WS_RS02330 PF03144 Elongation factor Tu domain 2 WS_RS02330 PF03764 Elongation factor G, domain IV WS_RS02330 PF14492 Elongation Factor G, domain II WS_RS02335 PF02811 PHP domain WS_RS02340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 WS_RS02345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WS_RS02350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WS_RS02355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WS_RS02360 PF16514 WS_RS02360 WS_RS02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase WS_RS02365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WS_RS02365 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WS_RS02370 PF00037 4Fe-4S binding domain WS_RS02370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WS_RS02370 PF13510 2Fe-2S iron-sulfur cluster binding domain WS_RS02380 PF00146 NADH dehydrogenase WS_RS02385 PF12838 4Fe-4S dicluster domain WS_RS02390 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 WS_RS02395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WS_RS02400 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WS_RS02400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus WS_RS02405 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WS_RS02410 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WS_RS02415 PF09976 Tetratricopeptide repeat WS_RS02435 PF00012 Hsp70 protein WS_RS02440 PF01025 GrpE WS_RS02450 PF00596 Class II Aldolase and Adducin N-terminal domain WS_RS02455 PF00669 Bacterial flagellin N-terminal helical region WS_RS02460 PF00216 Bacterial DNA-binding protein WS_RS02470 PF01042 Endoribonuclease L-PSP WS_RS02475 PF00829 Ribosomal prokaryotic L21 protein WS_RS02480 PF01016 Ribosomal L27 protein WS_RS02485 PF01018 GTP1/OBG WS_RS02485 PF01926 50S ribosome-binding GTPase WS_RS02490 PF00696 Amino acid kinase family WS_RS02495 PF00551 Formyl transferase WS_RS02495 PF02911 Formyl transferase, C-terminal domain WS_RS02500 PF03099 Biotin/lipoate A/B protein ligase family WS_RS02505 PF13614 AAA domain WS_RS02510 PF02195 ParB-like nuclease domain WS_RS02515 PF00430 ATP synthase B/B' CF(0) WS_RS02520 PF00430 ATP synthase B/B' CF(0) WS_RS02525 PF00213 ATP synthase delta (OSCP) subunit WS_RS02530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WS_RS02530 PF00306 ATP synthase alpha/beta chain, C terminal domain WS_RS02530 PF02874 ATP synthase alpha/beta family, beta-barrel domain WS_RS02535 PF00231 ATP synthase WS_RS02540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WS_RS02540 PF02874 ATP synthase alpha/beta family, beta-barrel domain WS_RS02545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain WS_RS02550 PF01618 WS_RS02550 WS_RS02555 PF02472 Biopolymer transport protein ExbD/TolR WS_RS02560 PF13103 TonB C terminal WS_RS02565 PF04052 TolB amino-terminal domain WS_RS02570 PF00691 OmpA family WS_RS02575 PF13432 Tetratricopeptide repeat WS_RS02580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WS_RS02585 PF00158 Sigma-54 interaction domain WS_RS02585 PF02954 Bacterial regulatory protein, Fis family WS_RS02590 PF00698 Acyl transferase domain WS_RS02595 PF01048 Phosphorylase superfamily WS_RS02600 PF00300 Histidine phosphatase superfamily (branch 1) WS_RS02605 PF00437 Type II/IV secretion system protein WS_RS02620 PF00437 Type II/IV secretion system protein WS_RS02635 PF07963 Prokaryotic N-terminal methylation motif WS_RS02655 PF00263 WS_RS02655 WS_RS02655 PF07655 WS_RS02655 WS_RS02655 PF07660 Secretin and TonB N terminus short domain WS_RS02660 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 WS_RS02665 PF00437 Type II/IV secretion system protein WS_RS02665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain WS_RS02670 PF00482 Type II secretion system (T2SS), protein F WS_RS02675 PF01475 Ferric uptake regulator family WS_RS02680 PF00448 SRP54-type protein, GTPase domain WS_RS02680 PF02881 SRP54-type protein, helical bundle domain WS_RS02680 PF02978 Signal peptide binding domain WS_RS02685 PF00886 Ribosomal protein S16 WS_RS02690 PF13083 KH domain WS_RS02695 PF01782 RimM N-terminal domain WS_RS02695 PF05239 PRC-barrel domain WS_RS02700 PF01746 tRNA (Guanine-1)-methyltransferase WS_RS02705 PF01245 Ribosomal protein L19 WS_RS02710 PF00132 Bacterial transferase hexapeptide (six repeats) WS_RS02715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain WS_RS02715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain WS_RS02720 PF02130 Uncharacterized protein family UPF0054 WS_RS02725 PF04214 WS_RS02725 WS_RS02730 PF03167 Uracil DNA glycosylase superfamily WS_RS02735 PF02686 Glu-tRNAGln amidotransferase C subunit WS_RS02740 PF00330 Aconitase family (aconitate hydratase) WS_RS02745 PF00543 Nitrogen regulatory protein P-II WS_RS02750 PF00456 Transketolase, thiamine diphosphate binding domain WS_RS02750 PF02779 Transketolase, pyrimidine binding domain WS_RS02750 PF02780 Transketolase, C-terminal domain WS_RS02755 PF12705 PD-(D/E)XK nuclease superfamily WS_RS02760 PF13664 WS_RS02760 WS_RS02765 PF03883 WS_RS02765 WS_RS02770 PF00364 Biotin-requiring enzyme WS_RS02770 PF00682 HMGL-like WS_RS02770 PF02436 Conserved carboxylase domain WS_RS02775 PF02601 WS_RS02775 WS_RS02775 PF13742 WS_RS02775 WS_RS02780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WS_RS02785 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS02790 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS02790 PF12911 WS_RS02790 WS_RS02795 PF00005 ABC transporter WS_RS02795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WS_RS02800 PF00565 Staphylococcal nuclease homologue WS_RS02805 PF01738 Dienelactone hydrolase family WS_RS02810 PF01435 Peptidase family M48 WS_RS02815 PF03738 Glutathionylspermidine synthase preATP-grasp WS_RS02825 PF13247 4Fe-4S dicluster domain WS_RS02830 PF01292 Prokaryotic cytochrome b561 WS_RS02835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WS_RS02835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WS_RS02840 PF05573 NosL WS_RS02845 PF00578 AhpC/TSA family WS_RS02850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain WS_RS02850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain WS_RS02850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain WS_RS02860 PF01479 S4 domain WS_RS02860 PF01728 FtsJ-like methyltransferase WS_RS02865 PF01687 Riboflavin kinase WS_RS02865 PF06574 FAD synthetase WS_RS02870 PF13847 Methyltransferase domain WS_RS02875 PF01546 Peptidase family M20/M25/M40 WS_RS02875 PF07687 Peptidase dimerisation domain WS_RS02880 PF04542 Sigma-70 region 2 WS_RS02880 PF08281 Sigma-70, region 4 WS_RS02885 PF04773 FecR protein WS_RS02885 PF16344 WS_RS02885 WS_RS02890 PF00593 TonB dependent receptor WS_RS02890 PF07715 TonB-dependent Receptor Plug Domain WS_RS02900 PF03929 WS_RS02900 WS_RS02910 PF00501 AMP-binding enzyme WS_RS02910 PF13193 AMP-binding enzyme C-terminal domain WS_RS02910 PF16177 WS_RS02910 WS_RS02915 PF00929 Exonuclease WS_RS02920 PF00027 Cyclic nucleotide-binding domain WS_RS02920 PF03445 WS_RS02920 WS_RS02920 PF10335 WS_RS02920 WS_RS02925 PF00474 Sodium:solute symporter family WS_RS02930 PF04341 WS_RS02930 WS_RS02935 PF00474 Sodium:solute symporter family WS_RS02940 PF13937 WS_RS02940 WS_RS02945 PF01553 Acyltransferase WS_RS02955 PF13507 CobB/CobQ-like glutamine amidotransferase domain WS_RS02960 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase WS_RS02965 PF01259 SAICAR synthetase WS_RS02970 PF03572 Peptidase family S41 WS_RS02970 PF13180 PDZ domain WS_RS02975 PF00004 ATPase family associated with various cellular activities (AAA) WS_RS02975 PF02861 Clp amino terminal domain WS_RS02975 PF07724 AAA domain (Cdc48 subfamily) WS_RS02975 PF10431 C-terminal, D2-small domain, of ClpB protein WS_RS02980 PF13144 SAF-like WS_RS02985 PF02441 Flavoprotein WS_RS02990 PF01467 Cytidylyltransferase WS_RS02995 PF02223 Thymidylate kinase WS_RS03005 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB WS_RS03015 PF00117 Glutamine amidotransferase class-I WS_RS03020 PF00977 Histidine biosynthesis protein WS_RS03025 PF00072 Response regulator receiver domain WS_RS03030 PF06325 Ribosomal protein L11 methyltransferase (PrmA) WS_RS03035 PF00004 ATPase family associated with various cellular activities (AAA) WS_RS03035 PF01434 Peptidase family M41 WS_RS03045 PF01066 CDP-alcohol phosphatidyltransferase WS_RS03050 PF00682 HMGL-like WS_RS03050 PF08502 LeuA allosteric (dimerisation) domain WS_RS03055 PF00581 Rhodanese-like domain WS_RS03060 PF11853 WS_RS03060 WS_RS03065 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit WS_RS03070 PF00109 Beta-ketoacyl synthase, N-terminal domain WS_RS03070 PF02801 Beta-ketoacyl synthase, C-terminal domain WS_RS03075 PF00550 Phosphopantetheine attachment site WS_RS03080 PF13561 Enoyl-(Acyl carrier protein) reductase WS_RS03085 PF01165 Ribosomal protein S21 WS_RS03090 PF13384 Homeodomain-like domain WS_RS03095 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase WS_RS03095 PF12801 WS_RS03095 WS_RS03095 PF13746 4Fe-4S dicluster domain WS_RS03100 PF03595 Voltage-dependent anion channel WS_RS03110 PF02687 WS_RS03110 WS_RS03115 PF00005 ABC transporter WS_RS03125 PF00512 His Kinase A (phospho-acceptor) domain WS_RS03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS03130 PF00072 Response regulator receiver domain WS_RS03130 PF00486 Transcriptional regulatory protein, C terminal WS_RS03135 PF01219 Prokaryotic diacylglycerol kinase WS_RS03140 PF00884 Sulfatase WS_RS03140 PF08019 WS_RS03140 WS_RS03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS03155 PF10670 WS_RS03155 WS_RS03160 PF01891 Cobalt uptake substrate-specific transmembrane region WS_RS03170 PF02361 Cobalt transport protein WS_RS03175 PF00005 ABC transporter WS_RS03180 PF01810 WS_RS03180 WS_RS03185 PF00916 WS_RS03185 WS_RS03185 PF01740 STAS domain WS_RS03190 PF08378 WS_RS03190 WS_RS03195 PF00535 Glycosyl transferase family 2 WS_RS03200 PF01636 Phosphotransferase enzyme family WS_RS03205 PF03641 Possible lysine decarboxylase WS_RS03210 PF00072 Response regulator receiver domain WS_RS03210 PF00486 Transcriptional regulatory protein, C terminal WS_RS03225 PF00710 Asparaginase WS_RS03230 PF03605 WS_RS03230 WS_RS03235 PF00206 Lyase WS_RS03235 PF10415 Fumarase C C-terminus WS_RS03245 PF00583 Acetyltransferase (GNAT) family WS_RS03255 PF08003 Protein of unknown function (DUF1698) WS_RS03265 PF01467 Cytidylyltransferase WS_RS03265 PF02410 Oligomerisation domain WS_RS03275 PF01478 Type IV leader peptidase family WS_RS03275 PF06750 WS_RS03275 WS_RS03280 PF03739 WS_RS03280 WS_RS03285 PF01416 tRNA pseudouridine synthase WS_RS03290 PF13386 WS_RS03290 WS_RS03295 PF13242 HAD-hyrolase-like WS_RS03300 PF01370 NAD dependent epimerase/dehydratase family WS_RS03305 PF00294 pfkB family carbohydrate kinase WS_RS03305 PF01467 Cytidylyltransferase WS_RS03310 PF13580 SIS domain WS_RS03320 PF03477 ATP cone domain WS_RS03320 PF13597 Anaerobic ribonucleoside-triphosphate reductase WS_RS03325 PF13597 Anaerobic ribonucleoside-triphosphate reductase WS_RS03330 PF04055 Radical SAM superfamily WS_RS03330 PF13353 4Fe-4S single cluster domain WS_RS03335 PF04074 Domain of unknown function (DUF386) WS_RS03340 PF00425 chorismate binding enzyme WS_RS03350 PF02082 Transcriptional regulator WS_RS03355 PF00704 Glycosyl hydrolases family 18 WS_RS03360 PF00072 Response regulator receiver domain WS_RS03360 PF07228 Stage II sporulation protein E (SpoIIE) WS_RS03365 PF13581 Histidine kinase-like ATPase domain WS_RS03375 PF08447 PAS fold WS_RS03380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS03385 PF00226 DnaJ domain WS_RS03385 PF00684 DnaJ central domain WS_RS03385 PF01556 DnaJ C terminal domain WS_RS03390 PF02132 RecR protein WS_RS03395 PF00034 Cytochrome c WS_RS03400 PF00842 Alanine racemase, C-terminal domain WS_RS03400 PF01168 Alanine racemase, N-terminal domain WS_RS03410 PF00892 EamA-like transporter family WS_RS03415 PF01292 Prokaryotic cytochrome b561 WS_RS03415 PF09626 Dihaem cytochrome c WS_RS03420 PF00034 Cytochrome c WS_RS03425 PF03916 WS_RS03425 WS_RS03430 PF13247 4Fe-4S dicluster domain WS_RS03435 PF00384 Molybdopterin oxidoreductase WS_RS03435 PF01568 Molydopterin dinucleotide binding domain WS_RS03435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS03450 PF00501 AMP-binding enzyme WS_RS03450 PF14535 AMP-binding enzyme C-terminal domain WS_RS03455 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase WS_RS03460 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg WS_RS03460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WS_RS03465 PF03547 WS_RS03465 WS_RS03470 PF03061 Thioesterase superfamily WS_RS03480 PF00291 Pyridoxal-phosphate dependent enzyme WS_RS03485 PF00881 Nitroreductase family WS_RS03490 PF00768 D-alanyl-D-alanine carboxypeptidase WS_RS03495 PF00375 Sodium:dicarboxylate symporter family WS_RS03500 PF00710 Asparaginase WS_RS03515 PF13187 4Fe-4S dicluster domain WS_RS03515 PF13237 4Fe-4S dicluster domain WS_RS03520 PF02613 Nitrate reductase delta subunit WS_RS03530 PF00384 Molybdopterin oxidoreductase WS_RS03530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS03535 PF00384 Molybdopterin oxidoreductase WS_RS03535 PF01568 Molydopterin dinucleotide binding domain WS_RS03540 PF13247 4Fe-4S dicluster domain WS_RS03545 PF01292 Prokaryotic cytochrome b561 WS_RS03550 PF00962 Adenosine/AMP deaminase WS_RS03555 PF01869 BadF/BadG/BcrA/BcrD ATPase family WS_RS03560 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component WS_RS03565 PF00665 Integrase core domain WS_RS03570 PF00665 Integrase core domain WS_RS03570 PF01527 Transposase WS_RS03570 PF13276 WS_RS03570 WS_RS03580 PF00633 Helix-hairpin-helix motif WS_RS03580 PF00730 HhH-GPD superfamily base excision DNA repair protein WS_RS03585 PF00209 Sodium:neurotransmitter symporter family WS_RS03590 PF06808 WS_RS03590 WS_RS03595 PF16868 WS_RS03595 WS_RS03600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WS_RS03610 PF01022 Bacterial regulatory protein, arsR family WS_RS03615 PF02040 WS_RS03615 WS_RS03620 PF01451 Low molecular weight phosphotyrosine protein phosphatase WS_RS03625 PF03773 WS_RS03625 WS_RS03630 PF13192 Thioredoxin domain WS_RS03635 PF02683 WS_RS03635 WS_RS03640 PF04324 BFD-like [2Fe-2S] binding domain WS_RS03655 PF01451 Low molecular weight phosphotyrosine protein phosphatase WS_RS03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS03665 PF12849 PBP superfamily domain WS_RS03675 PF00384 Molybdopterin oxidoreductase WS_RS03675 PF01568 Molydopterin dinucleotide binding domain WS_RS03675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS03680 PF12800 4Fe-4S binding domain WS_RS03680 PF13247 4Fe-4S dicluster domain WS_RS03685 PF01022 Bacterial regulatory protein, arsR family WS_RS03690 PF00440 Bacterial regulatory proteins, tetR family WS_RS03690 PF14246 AefR-like transcriptional repressor, C-terminal region WS_RS03695 PF13533 Biotin-lipoyl like WS_RS03695 PF16576 WS_RS03695 WS_RS03700 PF00873 AcrB/AcrD/AcrF family WS_RS03705 PF02321 Outer membrane efflux protein WS_RS03710 PF00563 EAL domain WS_RS03715 PF05818 WS_RS03715 WS_RS03720 PF01177 Asp/Glu/Hydantoin racemase WS_RS03730 PF06039 WS_RS03730 WS_RS03740 PF00258 Flavodoxin WS_RS03745 PF11127 Protein of unknown function (DUF2892) WS_RS03750 PF03352 Methyladenine glycosylase WS_RS03755 PF17033 WS_RS03755 WS_RS03755 PF17129 WS_RS03755 WS_RS03760 PF00155 Aminotransferase class I and II WS_RS03765 PF06445 GyrI-like small molecule binding domain WS_RS03765 PF12833 Helix-turn-helix domain WS_RS03770 PF14602 Hexapeptide repeat of succinyl-transferase WS_RS03770 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle WS_RS03770 PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal WS_RS03775 PF08543 Phosphomethylpyrimidine kinase WS_RS03780 PF02581 Thiamine monophosphate synthase/TENI WS_RS03785 PF00076 RNA recognition motif WS_RS03790 PF00708 Acylphosphatase WS_RS03790 PF01300 Telomere recombination WS_RS03790 PF07503 HypF finger WS_RS03795 PF02492 CobW/HypB/UreG, nucleotide-binding domain WS_RS03800 PF01455 HupF/HypC family WS_RS03805 PF01924 Hydrogenase formation hypA family WS_RS03810 PF13087 AAA domain WS_RS03810 PF13604 AAA domain WS_RS03815 PF00586 AIR synthase related protein, N-terminal domain WS_RS03815 PF02769 AIR synthase related protein, C-terminal domain WS_RS03820 PF01155 Hydrogenase expression/synthesis hypA family WS_RS03830 PF02684 WS_RS03830 WS_RS03835 PF01272 Transcription elongation factor, GreA/GreB, C-term WS_RS03835 PF03449 Transcription elongation factor, N-terminal WS_RS03840 PF00692 dUTPase WS_RS03845 PF09976 Tetratricopeptide repeat WS_RS03855 PF03309 Type III pantothenate kinase WS_RS03860 PF01634 ATP phosphoribosyltransferase WS_RS03870 PF00563 EAL domain WS_RS03870 PF00990 GGDEF domain WS_RS03880 PF00581 Rhodanese-like domain WS_RS03885 PF01177 Asp/Glu/Hydantoin racemase WS_RS03890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WS_RS03890 PF07497 Rho termination factor, RNA-binding domain WS_RS03890 PF07498 Rho termination factor, N-terminal domain WS_RS03895 PF12118 WS_RS03895 WS_RS03900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase WS_RS03900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal WS_RS03900 PF13288 DXP reductoisomerase C-terminal domain WS_RS03905 PF01148 Cytidylyltransferase family WS_RS03910 PF04307 WS_RS03910 WS_RS03915 PF01134 Glucose inhibited division protein A WS_RS03915 PF13932 GidA associated domain 3 WS_RS03920 PF00472 RF-1 domain WS_RS03920 PF03462 PCRF domain WS_RS03925 PF01649 Ribosomal protein S20 WS_RS03930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WS_RS03930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WS_RS03930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WS_RS03930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WS_RS03935 PF01252 WS_RS03935 WS_RS03945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WS_RS03945 PF03129 Anticodon binding domain WS_RS03945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain WS_RS03950 PF00707 Translation initiation factor IF-3, C-terminal domain WS_RS03950 PF05198 Translation initiation factor IF-3, N-terminal domain WS_RS03955 PF01632 Ribosomal protein L35 WS_RS03960 PF00453 Ribosomal protein L20 WS_RS03965 PF00391 PEP-utilising enzyme, mobile domain WS_RS03965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain WS_RS03965 PF02896 PEP-utilising enzyme, TIM barrel domain WS_RS03970 PF00586 AIR synthase related protein, N-terminal domain WS_RS03970 PF02769 AIR synthase related protein, C-terminal domain WS_RS03980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WS_RS03985 PF13085 2Fe-2S iron-sulfur cluster binding domain WS_RS03985 PF13183 4Fe-4S dicluster domain WS_RS03990 PF00890 FAD binding domain WS_RS03990 PF02910 Fumarate reductase flavoprotein C-term WS_RS03995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit WS_RS04000 PF00582 Universal stress protein family WS_RS04005 PF00994 Probable molybdopterin binding domain WS_RS04005 PF03453 MoeA N-terminal region (domain I and II) WS_RS04005 PF03454 MoeA C-terminal region (domain IV) WS_RS04015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WS_RS04020 PF02634 FdhD/NarQ family WS_RS04025 PF00009 Elongation factor Tu GTP binding domain WS_RS04025 PF09107 Elongation factor SelB, winged helix WS_RS04030 PF03841 L-seryl-tRNA selenium transferase WS_RS04050 PF00474 Sodium:solute symporter family WS_RS04055 PF01145 SPFH domain / Band 7 family WS_RS04060 PF01957 NfeD-like C-terminal, partner-binding WS_RS04065 PF01047 MarR family WS_RS04070 PF00563 EAL domain WS_RS04070 PF02378 Phosphotransferase system, EIIC WS_RS04075 PF00072 Response regulator receiver domain WS_RS04075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS04085 PF00072 Response regulator receiver domain WS_RS04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS04090 PF00072 Response regulator receiver domain WS_RS04090 PF00486 Transcriptional regulatory protein, C terminal WS_RS04095 PF00583 Acetyltransferase (GNAT) family WS_RS04100 PF00202 Aminotransferase class-III WS_RS04105 PF06339 WS_RS04105 WS_RS04110 PF13411 MerR HTH family regulatory protein WS_RS04115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS04115 PF12729 WS_RS04115 WS_RS04120 PF00892 EamA-like transporter family WS_RS04125 PF00004 ATPase family associated with various cellular activities (AAA) WS_RS04130 PF13432 Tetratricopeptide repeat WS_RS04140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS04140 PF02743 Cache domain WS_RS04155 PF02069 Prokaryotic metallothionein WS_RS04160 PF02527 rRNA small subunit methyltransferase G WS_RS04165 PF02547 Queuosine biosynthesis protein WS_RS04170 PF00902 Sec-independent protein translocase protein (TatC) WS_RS04175 PF02416 mttA/Hcf106 family WS_RS04185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WS_RS04185 PF02403 Seryl-tRNA synthetase N-terminal domain WS_RS04190 PF13432 Tetratricopeptide repeat WS_RS04195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WS_RS04195 PF03466 LysR substrate binding domain WS_RS04200 PF00580 UvrD/REP helicase N-terminal domain WS_RS04200 PF13361 UvrD-like helicase C-terminal domain WS_RS04210 PF01509 TruB family pseudouridylate synthase (N terminal domain) WS_RS04215 PF02599 Global regulator protein family WS_RS04220 PF00288 GHMP kinases N terminal domain WS_RS04225 PF01668 SmpB protein WS_RS04230 PF01618 WS_RS04230 WS_RS04235 PF02472 Biopolymer transport protein ExbD/TolR WS_RS04245 PF00691 OmpA family WS_RS04260 PF00034 Cytochrome c WS_RS04270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain WS_RS04270 PF02843 Phosphoribosylglycinamide synthetase, C domain WS_RS04270 PF02844 Phosphoribosylglycinamide synthetase, N domain WS_RS04275 PF06271 WS_RS04275 WS_RS04280 PF04453 Organic solvent tolerance protein WS_RS04285 PF02470 WS_RS04285 WS_RS04290 PF00156 Phosphoribosyl transferase domain WS_RS04295 PF00013 KH domain WS_RS04295 PF00575 S1 RNA binding domain WS_RS04295 PF01138 3' exoribonuclease family, domain 1 WS_RS04295 PF03725 3' exoribonuclease family, domain 2 WS_RS04295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain WS_RS04300 PF00137 ATP synthase subunit C WS_RS04315 PF00072 Response regulator receiver domain WS_RS04315 PF00486 Transcriptional regulatory protein, C terminal WS_RS04320 PF00512 His Kinase A (phospho-acceptor) domain WS_RS04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS04320 PF08495 WS_RS04320 WS_RS04320 PF10442 WS_RS04320 WS_RS04325 PF16576 WS_RS04325 WS_RS04330 PF00873 AcrB/AcrD/AcrF family WS_RS04335 PF02321 Outer membrane efflux protein WS_RS04340 PF00440 Bacterial regulatory proteins, tetR family WS_RS04345 PF05940 WS_RS04345 WS_RS04350 PF00005 ABC transporter WS_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS04365 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein WS_RS04370 PF00593 TonB dependent receptor WS_RS04370 PF07715 TonB-dependent Receptor Plug Domain WS_RS04380 PF00027 Cyclic nucleotide-binding domain WS_RS04380 PF13545 Crp-like helix-turn-helix domain WS_RS04390 PF00665 Integrase core domain WS_RS04390 PF01527 Transposase WS_RS04390 PF13276 WS_RS04390 WS_RS04395 PF00034 Cytochrome c WS_RS04395 PF13473 Cupredoxin-like domain WS_RS04405 PF05048 Periplasmic copper-binding protein (NosD) WS_RS04410 PF12838 4Fe-4S dicluster domain WS_RS04425 PF12801 WS_RS04425 WS_RS04430 PF00005 ABC transporter WS_RS04435 PF05573 NosL WS_RS04440 PF12679 WS_RS04440 WS_RS04445 PF05573 NosL WS_RS04455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS04460 PF00892 EamA-like transporter family WS_RS04465 PF01914 WS_RS04465 WS_RS04470 PF00501 AMP-binding enzyme WS_RS04470 PF14535 AMP-binding enzyme C-terminal domain WS_RS04475 PF01842 ACT domain WS_RS04480 PF00072 Response regulator receiver domain WS_RS04480 PF00486 Transcriptional regulatory protein, C terminal WS_RS04490 PF12800 4Fe-4S binding domain WS_RS04490 PF13247 4Fe-4S dicluster domain WS_RS04495 PF03916 WS_RS04495 WS_RS04500 PF00384 Molybdopterin oxidoreductase WS_RS04500 PF01568 Molydopterin dinucleotide binding domain WS_RS04510 PF00563 EAL domain WS_RS04510 PF00990 GGDEF domain WS_RS04510 PF13426 PAS domain WS_RS04520 PF07690 Major Facilitator Superfamily WS_RS04525 PF00563 EAL domain WS_RS04525 PF00571 CBS domain WS_RS04525 PF00990 GGDEF domain WS_RS04530 PF12849 PBP superfamily domain WS_RS04535 PF00005 ABC transporter WS_RS04540 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS04540 PF11812 WS_RS04540 WS_RS04545 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS04545 PF12501 WS_RS04545 WS_RS04550 PF12849 PBP superfamily domain WS_RS04555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS04560 PF00072 Response regulator receiver domain WS_RS04560 PF00486 Transcriptional regulatory protein, C terminal WS_RS04565 PF00512 His Kinase A (phospho-acceptor) domain WS_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS04570 PF01256 Carbohydrate kinase WS_RS04570 PF03853 YjeF-related protein N-terminus WS_RS04575 PF05690 Thiazole biosynthesis protein ThiG WS_RS04580 PF04023 FeoA domain WS_RS04585 PF02421 Ferrous iron transport protein B WS_RS04585 PF07664 WS_RS04585 WS_RS04585 PF07670 Nucleoside recognition WS_RS04610 PF07805 HipA-like N-terminal domain WS_RS04615 PF00665 Integrase core domain WS_RS04615 PF01527 Transposase WS_RS04615 PF13276 WS_RS04615 WS_RS04620 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB WS_RS04620 PF08479 POTRA domain, ShlB-type WS_RS04635 PF00465 Iron-containing alcohol dehydrogenase WS_RS04645 PF00563 EAL domain WS_RS04645 PF00990 GGDEF domain WS_RS04660 PF01578 WS_RS04660 WS_RS04660 PF05140 WS_RS04660 WS_RS04665 PF02335 Cytochrome c552 WS_RS04670 PF03264 NapC/NirT cytochrome c family, N-terminal region WS_RS04675 PF06723 MreB/Mbl protein WS_RS04680 PF02578 Multi-copper polyphenol oxidoreductase laccase WS_RS04685 PF02659 WS_RS04685 WS_RS04690 PF00072 Response regulator receiver domain WS_RS04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS04695 PF00072 Response regulator receiver domain WS_RS04695 PF00512 His Kinase A (phospho-acceptor) domain WS_RS04695 PF00989 PAS fold WS_RS04695 PF01590 GAF domain WS_RS04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS04695 PF13426 PAS domain WS_RS04700 PF00583 Acetyltransferase (GNAT) family WS_RS04705 PF00005 ABC transporter WS_RS04710 PF00005 ABC transporter WS_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS04725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WS_RS04730 PF03573 outer membrane porin, OprD family WS_RS04735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WS_RS04740 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS04745 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS04750 PF00005 ABC transporter WS_RS04755 PF00005 ABC transporter WS_RS04760 PF01554 MatE WS_RS04765 PF02311 AraC-like ligand binding domain WS_RS04765 PF12833 Helix-turn-helix domain WS_RS04780 PF00593 TonB dependent receptor WS_RS04780 PF07715 TonB-dependent Receptor Plug Domain WS_RS04785 PF02597 ThiS family WS_RS04790 PF04752 WS_RS04790 WS_RS04790 PF15956 WS_RS04790 WS_RS04795 PF00924 Mechanosensitive ion channel WS_RS04800 PF00586 AIR synthase related protein, N-terminal domain WS_RS04800 PF02769 AIR synthase related protein, C-terminal domain WS_RS04815 PF01206 Sulfurtransferase TusA WS_RS04815 PF02635 DsrE/DsrF-like family WS_RS04820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS04820 PF00672 HAMP domain WS_RS04820 PF08376 Nitrate and nitrite sensing WS_RS04825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases WS_RS04825 PF13241 Putative NAD(P)-binding WS_RS04825 PF14824 Sirohaem biosynthesis protein central WS_RS04830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain WS_RS04830 PF01206 Sulfurtransferase TusA WS_RS04830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain WS_RS04835 PF14464 Prokaryotic homologs of the JAB domain WS_RS04840 PF00899 ThiF family WS_RS04845 PF02597 ThiS family WS_RS04850 PF00009 Elongation factor Tu GTP binding domain WS_RS04850 PF03143 Elongation factor Tu C-terminal domain WS_RS04855 PF01507 Phosphoadenosine phosphosulfate reductase family WS_RS04860 PF01507 Phosphoadenosine phosphosulfate reductase family WS_RS04865 PF09834 WS_RS04865 WS_RS04870 PF01053 Cys/Met metabolism PLP-dependent enzyme WS_RS04875 PF13649 Methyltransferase domain WS_RS04880 PF07690 Major Facilitator Superfamily WS_RS04885 PF01053 Cys/Met metabolism PLP-dependent enzyme WS_RS04890 PF01709 Transcriptional regulator WS_RS04900 PF07238 PilZ domain WS_RS04910 PF00216 Bacterial DNA-binding protein WS_RS04915 PF00072 Response regulator receiver domain WS_RS04915 PF00563 EAL domain WS_RS04915 PF00990 GGDEF domain WS_RS04915 PF08447 PAS fold WS_RS04920 PF00665 Integrase core domain WS_RS04920 PF01527 Transposase WS_RS04920 PF13276 WS_RS04920 WS_RS04925 PF00563 EAL domain WS_RS04935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WS_RS04935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain WS_RS04940 PF00342 Phosphoglucose isomerase WS_RS04945 PF00365 Phosphofructokinase WS_RS04950 PF13380 CoA binding domain WS_RS04950 PF13549 ATP-grasp domain WS_RS04950 PF13607 Succinyl-CoA ligase like flavodoxin domain WS_RS04955 PF00162 Phosphoglycerate kinase WS_RS04960 PF01544 CorA-like Mg2+ transporter protein WS_RS04965 PF00072 Response regulator receiver domain WS_RS04965 PF05732 WS_RS04965 WS_RS04970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS04975 PF13458 Periplasmic binding protein WS_RS04985 PF00999 Sodium/hydrogen exchanger family WS_RS04985 PF02254 TrkA-N domain WS_RS04990 PF01432 Peptidase family M3 WS_RS04990 PF08439 Oligopeptidase F WS_RS05015 PF03091 CutA1 divalent ion tolerance protein WS_RS05020 PF00296 Luciferase-like monooxygenase WS_RS05025 PF01475 Ferric uptake regulator family WS_RS05030 PF01297 Periplasmic solute binding protein family WS_RS05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS05035 PF12729 WS_RS05035 WS_RS05045 PF00551 Formyl transferase WS_RS05055 PF02272 DHHA1 domain WS_RS05060 PF00771 FHIPEP family WS_RS05065 PF00312 Ribosomal protein S15 WS_RS05070 PF03544 Gram-negative bacterial TonB protein C-terminal WS_RS05080 PF01052 Surface presentation of antigens (SPOA) WS_RS05085 PF13690 Chemotaxis phosphatase CheX WS_RS05090 PF00730 HhH-GPD superfamily base excision DNA repair protein WS_RS05090 PF10576 Iron-sulfur binding domain of endonuclease III WS_RS05095 PF03486 HI0933-like protein WS_RS05100 PF13109 WS_RS05100 WS_RS05100 PF13116 WS_RS05100 WS_RS05105 PF02618 YceG-like family WS_RS05110 PF00056 lactate/malate dehydrogenase, NAD binding domain WS_RS05110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain WS_RS05115 PF00549 CoA-ligase WS_RS05115 PF08442 ATP-grasp domain WS_RS05120 PF00549 CoA-ligase WS_RS05120 PF02629 CoA binding domain WS_RS05125 PF12838 4Fe-4S dicluster domain WS_RS05130 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg WS_RS05130 PF17147 WS_RS05130 WS_RS05135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WS_RS05140 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase WS_RS05145 PF00692 dUTPase WS_RS05150 PF00364 Biotin-requiring enzyme WS_RS05155 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain WS_RS05155 PF02785 Biotin carboxylase C-terminal domain WS_RS05155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WS_RS05160 PF00669 Bacterial flagellin N-terminal helical region WS_RS05160 PF00700 Bacterial flagellin C-terminal helical region WS_RS05165 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WS_RS05170 PF00072 Response regulator receiver domain WS_RS05175 PF01584 CheW-like domain WS_RS05185 PF01627 Hpt domain WS_RS05190 PF00665 Integrase core domain WS_RS05190 PF01527 Transposase WS_RS05190 PF13276 WS_RS05190 WS_RS05205 PF00589 Phage integrase family WS_RS05220 PF13154 WS_RS05220 WS_RS05220 PF13155 Toprim-like WS_RS05235 PF00436 Single-strand binding protein family WS_RS05240 PF02534 Type IV secretory system Conjugative DNA transfer WS_RS05250 PF00437 Type II/IV secretion system protein WS_RS05260 PF03743 Bacterial conjugation TrbI-like protein WS_RS05265 PF03524 Conjugal transfer protein WS_RS05270 PF04335 VirB8 protein WS_RS05275 PF04610 WS_RS05275 WS_RS05280 PF03135 WS_RS05280 WS_RS05290 PF04956 WS_RS05290 WS_RS05295 PF07022 Bacteriophage CI repressor helix-turn-helix domain WS_RS05300 PF10881 WS_RS05300 WS_RS05300 PF13086 AAA domain WS_RS05300 PF13087 AAA domain WS_RS05310 PF03432 WS_RS05310 WS_RS05315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WS_RS05330 PF00665 Integrase core domain WS_RS05330 PF01527 Transposase WS_RS05330 PF13276 WS_RS05330 WS_RS05335 PF12833 Helix-turn-helix domain WS_RS05340 PF09084 NMT1/THI5 like WS_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS05350 PF00005 ABC transporter WS_RS05355 PF09347 Domain of unknown function (DUF1989) WS_RS05360 PF09347 Domain of unknown function (DUF1989) WS_RS05365 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain WS_RS05365 PF00364 Biotin-requiring enzyme WS_RS05365 PF02626 Allophanate hydrolase subunit 2 WS_RS05365 PF02682 Allophanate hydrolase subunit 1 WS_RS05365 PF02785 Biotin carboxylase C-terminal domain WS_RS05365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WS_RS05370 PF00892 EamA-like transporter family WS_RS05375 PF01425 Amidase WS_RS05380 PF01022 Bacterial regulatory protein, arsR family WS_RS05385 PF00122 E1-E2 ATPase WS_RS05385 PF00403 Heavy-metal-associated domain WS_RS05385 PF00702 haloacid dehalogenase-like hydrolase WS_RS05390 PF01032 FecCD transport family WS_RS05395 PF00005 ABC transporter WS_RS05400 PF01497 Periplasmic binding protein WS_RS05405 PF00593 TonB dependent receptor WS_RS05405 PF07715 TonB-dependent Receptor Plug Domain WS_RS05410 PF13649 Methyltransferase domain WS_RS05420 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) WS_RS05420 PF04851 Type III restriction enzyme, res subunit WS_RS05420 PF12008 Type I restriction and modification enzyme - subunit R C terminal WS_RS05425 PF02661 Fic/DOC family WS_RS05430 PF02661 Fic/DOC family WS_RS05440 PF01420 Type I restriction modification DNA specificity domain WS_RS05445 PF10543 WS_RS05445 WS_RS05450 PF02384 N-6 DNA Methylase WS_RS05450 PF12161 HsdM N-terminal domain WS_RS05455 PF02537 WS_RS05455 WS_RS05460 PF02641 Uncharacterized ACR, COG1993 WS_RS05475 PF13187 4Fe-4S dicluster domain WS_RS05475 PF13237 4Fe-4S dicluster domain WS_RS05480 PF02613 Nitrate reductase delta subunit WS_RS05490 PF00384 Molybdopterin oxidoreductase WS_RS05490 PF01568 Molydopterin dinucleotide binding domain WS_RS05490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS05495 PF13247 4Fe-4S dicluster domain WS_RS05500 PF01292 Prokaryotic cytochrome b561 WS_RS05505 PF02634 FdhD/NarQ family WS_RS05510 PF05163 DinB family WS_RS05515 PF02169 LPP20 lipoprotein WS_RS05530 PF01810 WS_RS05530 WS_RS05535 PF02311 AraC-like ligand binding domain WS_RS05535 PF12833 Helix-turn-helix domain WS_RS05540 PF04016 Domain of unknown function (DUF364) WS_RS05545 PF00005 ABC transporter WS_RS05545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region WS_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS05555 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS05560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WS_RS05565 PF09925 WS_RS05565 WS_RS05570 PF14345 WS_RS05570 WS_RS05575 PF05488 PAAR motif WS_RS05585 PF02525 Flavodoxin-like fold WS_RS05590 PF01638 HxlR-like helix-turn-helix WS_RS05595 PF01638 HxlR-like helix-turn-helix WS_RS05600 PF03358 NADPH-dependent FMN reductase WS_RS05605 PF03927 NapD protein WS_RS05615 PF00037 4Fe-4S binding domain WS_RS05615 PF13187 4Fe-4S dicluster domain WS_RS05620 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) WS_RS05625 PF12801 WS_RS05625 WS_RS05625 PF13237 4Fe-4S dicluster domain WS_RS05630 PF12838 4Fe-4S dicluster domain WS_RS05635 PF00384 Molybdopterin oxidoreductase WS_RS05635 PF01568 Molydopterin dinucleotide binding domain WS_RS05635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS05635 PF10518 TAT (twin-arginine translocation) pathway signal sequence WS_RS05640 PF01925 WS_RS05640 WS_RS05645 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term WS_RS05650 PF00027 Cyclic nucleotide-binding domain WS_RS05650 PF13545 Crp-like helix-turn-helix domain WS_RS05660 PF03063 Prismane/CO dehydrogenase family WS_RS05670 PF00872 WS_RS05670 WS_RS05675 PF04332 WS_RS05675 WS_RS05680 PF00330 Aconitase family (aconitate hydratase) WS_RS05680 PF06434 Aconitate hydratase 2 N-terminus WS_RS05680 PF11791 Aconitate B N-terminal domain WS_RS05685 PF00291 Pyridoxal-phosphate dependent enzyme WS_RS05690 PF00266 Aminotransferase class-V WS_RS05695 PF01814 Hemerythrin HHE cation binding domain WS_RS05700 PF10006 WS_RS05700 WS_RS05710 PF00027 Cyclic nucleotide-binding domain WS_RS05710 PF13545 Crp-like helix-turn-helix domain WS_RS05715 PF00925 GTP cyclohydrolase II WS_RS05720 PF00994 Probable molybdopterin binding domain WS_RS05720 PF03453 MoeA N-terminal region (domain I and II) WS_RS05720 PF03454 MoeA C-terminal region (domain IV) WS_RS05725 PF02597 ThiS family WS_RS05730 PF02391 MoaE protein WS_RS05735 PF03205 Molybdopterin guanine dinucleotide synthesis protein B WS_RS05740 PF00994 Probable molybdopterin binding domain WS_RS05745 PF01967 MoaC family WS_RS05750 PF07992 Pyridine nucleotide-disulphide oxidoreductase WS_RS05750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster WS_RS05755 PF00310 Glutamine amidotransferases class-II WS_RS05755 PF01493 GXGXG motif WS_RS05755 PF01645 Conserved region in glutamate synthase WS_RS05755 PF04898 Glutamate synthase central domain WS_RS05775 PF00072 Response regulator receiver domain WS_RS05775 PF00486 Transcriptional regulatory protein, C terminal WS_RS05780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS05780 PF17201 WS_RS05780 WS_RS05785 PF00226 DnaJ domain WS_RS05785 PF05099 Tellurite resistance protein TerB WS_RS05795 PF01739 CheR methyltransferase, SAM binding domain WS_RS05795 PF03705 CheR methyltransferase, all-alpha domain WS_RS05800 PF01339 CheB methylesterase WS_RS05805 PF01205 Uncharacterized protein family UPF0029 WS_RS05810 PF03653 WS_RS05810 WS_RS05815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS05815 PF17200 WS_RS05815 WS_RS05820 PF00206 Lyase WS_RS05820 PF14698 Argininosuccinate lyase C-terminal WS_RS05825 PF02566 OsmC-like protein WS_RS05830 PF01209 ubiE/COQ5 methyltransferase family WS_RS05835 PF00589 Phage integrase family WS_RS05840 PF00925 GTP cyclohydrolase II WS_RS05840 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase WS_RS05855 PF06629 WS_RS05855 WS_RS05860 PF00440 Bacterial regulatory proteins, tetR family WS_RS05860 PF13972 Bacterial transcriptional repressor WS_RS05865 PF01227 GTP cyclohydrolase I WS_RS05870 PF01435 Peptidase family M48 WS_RS05875 PF01142 tRNA pseudouridine synthase D (TruD) WS_RS05885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS05890 PF00665 Integrase core domain WS_RS05890 PF01527 Transposase WS_RS05890 PF13276 WS_RS05890 WS_RS05900 PF00593 TonB dependent receptor WS_RS05900 PF07715 TonB-dependent Receptor Plug Domain WS_RS05905 PF00809 Pterin binding enzyme WS_RS05905 PF02310 B12 binding domain WS_RS05905 PF02574 Homocysteine S-methyltransferase WS_RS05905 PF02607 B12 binding domain WS_RS05905 PF02965 Vitamin B12 dependent methionine synthase, activation domain WS_RS05915 PF03167 Uracil DNA glycosylase superfamily WS_RS05925 PF13277 YmdB-like protein WS_RS05930 PF00270 DEAD/DEAH box helicase WS_RS05930 PF00271 Helicase conserved C-terminal domain WS_RS05930 PF02559 CarD-like/TRCF domain WS_RS05930 PF03461 TRCF domain WS_RS05935 PF04519 WS_RS05935 WS_RS05940 PF01551 Peptidase family M23 WS_RS05945 PF08245 Mur ligase middle domain WS_RS05950 PF00990 GGDEF domain WS_RS05955 PF04390 Lipopolysaccharide-assembly WS_RS05960 PF00133 tRNA synthetases class I (I, L, M and V) WS_RS05960 PF09334 tRNA synthetases class I (M) WS_RS05960 PF13603 Leucyl-tRNA synthetase, Domain 2 WS_RS05970 PF02355 Protein export membrane protein WS_RS05970 PF07549 SecD/SecF GG Motif WS_RS05975 PF02355 Protein export membrane protein WS_RS05980 PF02699 Preprotein translocase subunit WS_RS05985 PF06965 Na+/H+ antiporter 1 WS_RS05990 PF00580 UvrD/REP helicase N-terminal domain WS_RS05990 PF13361 UvrD-like helicase C-terminal domain WS_RS05995 PF00226 DnaJ domain WS_RS05995 PF01556 DnaJ C terminal domain WS_RS06000 PF13411 MerR HTH family regulatory protein WS_RS06005 PF05496 Holliday junction DNA helicase ruvB N-terminus WS_RS06005 PF12002 MgsA AAA+ ATPase C terminal WS_RS06005 PF16193 WS_RS06005 WS_RS06010 PF03548 Outer membrane lipoprotein carrier protein LolA WS_RS06015 PF00271 Helicase conserved C-terminal domain WS_RS06015 PF01043 SecA preprotein cross-linking domain WS_RS06015 PF02810 SEC-C motif WS_RS06015 PF07516 SecA Wing and Scaffold domain WS_RS06015 PF07517 SecA DEAD-like domain WS_RS06020 PF02687 WS_RS06020 WS_RS06020 PF12704 MacB-like periplasmic core domain WS_RS06025 PF04359 Protein of unknown function (DUF493) WS_RS06030 PF03061 Thioesterase superfamily WS_RS06040 PF00665 Integrase core domain WS_RS06040 PF01527 Transposase WS_RS06040 PF13276 WS_RS06040 WS_RS06045 PF00593 TonB dependent receptor WS_RS06050 PF00005 ABC transporter WS_RS06050 PF00664 ABC transporter transmembrane region WS_RS06055 PF00005 ABC transporter WS_RS06055 PF00664 ABC transporter transmembrane region WS_RS06060 PF07690 Major Facilitator Superfamily WS_RS06065 PF07690 Major Facilitator Superfamily WS_RS06070 PF02659 WS_RS06070 WS_RS06075 PF02321 Outer membrane efflux protein WS_RS06080 PF13437 HlyD family secretion protein WS_RS06080 PF13533 Biotin-lipoyl like WS_RS06085 PF00873 AcrB/AcrD/AcrF family WS_RS06090 PF00586 AIR synthase related protein, N-terminal domain WS_RS06095 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WS_RS06095 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WS_RS06100 PF02445 Quinolinate synthetase A protein WS_RS06105 PF02666 WS_RS06105 WS_RS06110 PF04376 WS_RS06110 WS_RS06110 PF04377 WS_RS06110 WS_RS06115 PF01464 Transglycosylase SLT domain WS_RS06115 PF11873 Domain of unknown function (DUF3393) WS_RS06120 PF01965 DJ-1/PfpI family WS_RS06125 PF01132 Elongation factor P (EF-P) OB domain WS_RS06125 PF08207 Elongation factor P (EF-P) KOW-like domain WS_RS06125 PF09285 Elongation factor P, C-terminal WS_RS06130 PF01116 Fructose-bisphosphate aldolase class-II WS_RS06135 PF13616 PPIC-type PPIASE domain WS_RS06145 PF07264 Etoposide-induced protein 2 WS_RS06150 PF01926 50S ribosome-binding GTPase WS_RS06150 PF10396 GTP-binding protein TrmE N-terminus WS_RS06150 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE WS_RS06155 PF14804 Jag N-terminus WS_RS06160 PF02096 60Kd inner membrane protein WS_RS06160 PF14849 YidC periplasmic domain WS_RS06165 PF01809 WS_RS06165 WS_RS06175 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain WS_RS06175 PF02785 Biotin carboxylase C-terminal domain WS_RS06175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WS_RS06180 PF02673 WS_RS06180 WS_RS06185 PF03734 L,D-transpeptidase catalytic domain WS_RS06190 PF01926 50S ribosome-binding GTPase WS_RS06190 PF07650 KH domain WS_RS06195 PF07724 AAA domain (Cdc48 subfamily) WS_RS06195 PF10431 C-terminal, D2-small domain, of ClpB protein WS_RS06200 PF00227 Proteasome subunit WS_RS06205 PF01281 Ribosomal protein L9, N-terminal domain WS_RS06205 PF03948 Ribosomal protein L9, C-terminal domain WS_RS06210 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain WS_RS06220 PF00011 Hsp20/alpha crystallin family WS_RS06225 PF00171 Aldehyde dehydrogenase family WS_RS06230 PF01235 WS_RS06230 WS_RS06235 PF04551 GcpE protein WS_RS06245 PF00400 WD domain, G-beta repeat WS_RS06250 PF01230 HIT domain WS_RS06255 PF01409 tRNA synthetases class II core domain (F) WS_RS06255 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain WS_RS06260 PF01588 Putative tRNA binding domain WS_RS06260 PF03147 Ferredoxin-fold anticodon binding domain WS_RS06260 PF03484 tRNA synthetase B5 domain WS_RS06265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) WS_RS06270 PF02401 LytB protein WS_RS06275 PF00575 S1 RNA binding domain WS_RS06285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WS_RS06285 PF01842 ACT domain WS_RS06285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WS_RS06295 PF00950 WS_RS06295 WS_RS06300 PF00005 ABC transporter WS_RS06305 PF00877 NlpC/P60 family WS_RS06305 PF12912 NLPC_P60 stabilising domain, N term WS_RS06305 PF12913 SH3 domain of the SH3b1 type WS_RS06305 PF12914 SH3 domain of SH3b2 type WS_RS06310 PF03960 ArsC family WS_RS06315 PF05437 WS_RS06315 WS_RS06320 PF03591 WS_RS06320 WS_RS06325 PF00939 Sodium:sulfate symporter transmembrane region WS_RS06330 PF01435 Peptidase family M48 WS_RS06335 PF01451 Low molecular weight phosphotyrosine protein phosphatase WS_RS06340 PF00149 Calcineurin-like phosphoesterase WS_RS06350 PF00581 Rhodanese-like domain WS_RS06360 PF04402 Protein of unknown function (DUF541) WS_RS06365 PF01810 WS_RS06365 WS_RS06375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS06375 PF02743 Cache domain WS_RS06385 PF13566 WS_RS06385 WS_RS06390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS06390 PF13682 Chemoreceptor zinc-binding domain WS_RS06395 PF08447 PAS fold WS_RS06400 PF00072 Response regulator receiver domain WS_RS06410 PF00999 Sodium/hydrogen exchanger family WS_RS06415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III WS_RS06420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain WS_RS06420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain WS_RS06425 PF00717 Peptidase S24-like WS_RS06435 PF02502 Ribose/Galactose Isomerase WS_RS06445 PF00156 Phosphoribosyl transferase domain WS_RS06450 PF00291 Pyridoxal-phosphate dependent enzyme WS_RS06455 PF09335 WS_RS06455 WS_RS06460 PF00883 Cytosol aminopeptidase family, catalytic domain WS_RS06460 PF02789 Cytosol aminopeptidase family, N-terminal domain WS_RS06465 PF01926 50S ribosome-binding GTPase WS_RS06465 PF06071 Protein of unknown function (DUF933) WS_RS06470 PF13186 Iron-sulfur cluster-binding domain WS_RS06480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WS_RS06490 PF00665 Integrase core domain WS_RS06490 PF01527 Transposase WS_RS06490 PF13276 WS_RS06490 WS_RS06510 PF00665 Integrase core domain WS_RS06510 PF01527 Transposase WS_RS06510 PF13276 WS_RS06510 WS_RS06515 PF07690 Major Facilitator Superfamily WS_RS06525 PF00350 Dynamin family WS_RS06535 PF12849 PBP superfamily domain WS_RS06540 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS06545 PF00005 ABC transporter WS_RS06555 PF02915 Rubrerythrin WS_RS06555 PF06397 Desulfoferrodoxin, N-terminal domain WS_RS06560 PF00072 Response regulator receiver domain WS_RS06560 PF00512 His Kinase A (phospho-acceptor) domain WS_RS06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS06560 PF13426 PAS domain WS_RS06565 PF00072 Response regulator receiver domain WS_RS06575 PF02080 TrkA-C domain WS_RS06575 PF02254 TrkA-N domain WS_RS06580 PF02386 Cation transport protein WS_RS06590 PF04552 Sigma-54, DNA binding domain WS_RS06590 PF04963 Sigma-54 factor, core binding domain WS_RS06595 PF00111 2Fe-2S iron-sulfur cluster binding domain WS_RS06600 PF04319 WS_RS06600 WS_RS06605 PF03206 WS_RS06605 WS_RS06610 PF14697 4Fe-4S dicluster domain WS_RS06615 PF03270 Protein of unknown function, DUF269 WS_RS06620 PF02579 Dinitrogenase iron-molybdenum cofactor WS_RS06625 PF00148 Nitrogenase component 1 type Oxidoreductase WS_RS06630 PF00148 Nitrogenase component 1 type Oxidoreductase WS_RS06635 PF00148 Nitrogenase component 1 type Oxidoreductase WS_RS06635 PF11844 Domain of unknown function (DUF3364) WS_RS06640 PF00148 Nitrogenase component 1 type Oxidoreductase WS_RS06650 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family WS_RS06660 PF00682 HMGL-like WS_RS06665 PF02579 Dinitrogenase iron-molybdenum cofactor WS_RS06665 PF04055 Radical SAM superfamily WS_RS06670 PF00248 Aldo/keto reductase family WS_RS06675 PF00890 FAD binding domain WS_RS06675 PF02910 Fumarate reductase flavoprotein C-term WS_RS06680 PF06988 NifT/FixU protein WS_RS06685 PF04891 WS_RS06685 WS_RS06690 PF06689 ClpX C4-type zinc finger WS_RS06690 PF07724 AAA domain (Cdc48 subfamily) WS_RS06690 PF10431 C-terminal, D2-small domain, of ClpB protein WS_RS06695 PF00158 Sigma-54 interaction domain WS_RS06695 PF02954 Bacterial regulatory protein, Fis family WS_RS06695 PF13185 GAF domain WS_RS06700 PF02086 D12 class N6 adenine-specific DNA methyltransferase WS_RS06705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS06705 PF00672 HAMP domain WS_RS06705 PF02743 Cache domain WS_RS06710 PF13840 ACT domain WS_RS06720 PF03929 WS_RS06720 WS_RS06730 PF02421 Ferrous iron transport protein B WS_RS06730 PF07664 WS_RS06730 WS_RS06730 PF07670 Nucleoside recognition WS_RS06735 PF04023 FeoA domain WS_RS06745 PF00593 TonB dependent receptor WS_RS06745 PF07715 TonB-dependent Receptor Plug Domain WS_RS06750 PF02321 Outer membrane efflux protein WS_RS06755 PF00005 ABC transporter WS_RS06755 PF02687 WS_RS06755 WS_RS06755 PF12704 MacB-like periplasmic core domain WS_RS06760 PF16576 WS_RS06760 WS_RS06765 PF00593 TonB dependent receptor WS_RS06765 PF07660 Secretin and TonB N terminus short domain WS_RS06765 PF07715 TonB-dependent Receptor Plug Domain WS_RS06770 PF04773 FecR protein WS_RS06770 PF16220 WS_RS06770 WS_RS06775 PF04542 Sigma-70 region 2 WS_RS06775 PF08281 Sigma-70, region 4 WS_RS06785 PF00593 TonB dependent receptor WS_RS06785 PF07715 TonB-dependent Receptor Plug Domain WS_RS06795 PF02472 Biopolymer transport protein ExbD/TolR WS_RS06800 PF01618 WS_RS06800 WS_RS06805 PF00384 Molybdopterin oxidoreductase WS_RS06805 PF01568 Molydopterin dinucleotide binding domain WS_RS06805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain WS_RS06810 PF12800 4Fe-4S binding domain WS_RS06810 PF13247 4Fe-4S dicluster domain WS_RS06815 PF04976 WS_RS06815 WS_RS06820 PF02613 Nitrate reductase delta subunit WS_RS06825 PF00072 Response regulator receiver domain WS_RS06825 PF00486 Transcriptional regulatory protein, C terminal WS_RS06830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle WS_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS06875 PF02219 Methylenetetrahydrofolate reductase WS_RS06880 PF02384 N-6 DNA Methylase WS_RS06885 PF09827 CRISPR associated protein Cas2 WS_RS06890 PF01867 CRISPR associated protein Cas1 WS_RS06895 PF13395 HNH endonuclease WS_RS06915 PF03129 Anticodon binding domain WS_RS06915 PF13393 Histidyl-tRNA synthetase WS_RS06920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WS_RS06925 PF00403 Heavy-metal-associated domain WS_RS06930 PF01474 Class-II DAHP synthetase family WS_RS06935 PF00285 Citrate synthase WS_RS06940 PF00180 Isocitrate/isopropylmalate dehydrogenase WS_RS06960 PF01936 NYN domain WS_RS06960 PF12872 OST-HTH/LOTUS domain WS_RS06965 PF01734 Patatin-like phospholipase WS_RS06970 PF01361 Tautomerase enzyme WS_RS06975 PF05728 Uncharacterised protein family (UPF0227) WS_RS06980 PF00072 Response regulator receiver domain WS_RS06980 PF00486 Transcriptional regulatory protein, C terminal WS_RS06985 PF00512 His Kinase A (phospho-acceptor) domain WS_RS06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS06990 PF02646 WS_RS06990 WS_RS06995 PF00005 ABC transporter WS_RS07000 PF00005 ABC transporter WS_RS07000 PF12399 Branched-chain amino acid ATP-binding cassette transporter WS_RS07005 PF02653 WS_RS07005 WS_RS07010 PF02653 WS_RS07010 WS_RS07015 PF13458 Periplasmic binding protein WS_RS07020 PF00588 SpoU rRNA Methylase family WS_RS07025 PF00551 Formyl transferase WS_RS07030 PF01343 Peptidase family S49 WS_RS07035 PF01979 Amidohydrolase family WS_RS07040 PF00924 Mechanosensitive ion channel WS_RS07040 PF05552 Conserved TM helix WS_RS07045 PF01979 Amidohydrolase family WS_RS07050 PF02683 WS_RS07050 WS_RS07055 PF00270 DEAD/DEAH box helicase WS_RS07055 PF00271 Helicase conserved C-terminal domain WS_RS07060 PF00155 Aminotransferase class I and II WS_RS07065 PF01225 Mur ligase family, catalytic domain WS_RS07065 PF02875 Mur ligase family, glutamate ligase domain WS_RS07065 PF08245 Mur ligase middle domain WS_RS07075 PF00488 MutS domain V WS_RS07075 PF01713 Smr domain WS_RS07080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain WS_RS07085 PF01313 WS_RS07085 WS_RS07090 PF00034 Cytochrome c WS_RS07090 PF03150 Di-haem cytochrome c peroxidase WS_RS07095 PF02621 Menaquinone biosynthesis WS_RS07100 PF00154 recA bacterial DNA recombination protein WS_RS07105 PF00113 Enolase, C-terminal TIM barrel domain WS_RS07105 PF03952 Enolase, N-terminal domain WS_RS07115 PF11741 AMIN domain WS_RS07120 PF01202 Shikimate kinase WS_RS07125 PF00226 DnaJ domain WS_RS07130 PF03631 WS_RS07130 WS_RS07135 PF04055 Radical SAM superfamily WS_RS07135 PF06968 Biotin and Thiamin Synthesis associated domain WS_RS07140 PF01131 DNA topoisomerase WS_RS07140 PF01396 WS_RS07140 WS_RS07140 PF01751 Toprim domain WS_RS07145 PF00669 Bacterial flagellin N-terminal helical region WS_RS07145 PF00700 Bacterial flagellin C-terminal helical region WS_RS07145 PF07196 Flagellin hook IN motif WS_RS07150 PF13432 Tetratricopeptide repeat WS_RS07155 PF00730 HhH-GPD superfamily base excision DNA repair protein WS_RS07160 PF00881 Nitroreductase family WS_RS07165 PF01546 Peptidase family M20/M25/M40 WS_RS07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS07170 PF00672 HAMP domain WS_RS07170 PF14827 Sensory domain of two-component sensor kinase WS_RS07180 PF00004 ATPase family associated with various cellular activities (AAA) WS_RS07180 PF01434 Peptidase family M41 WS_RS07185 PF00919 Uncharacterized protein family UPF0004 WS_RS07185 PF04055 Radical SAM superfamily WS_RS07190 PF00924 Mechanosensitive ion channel WS_RS07195 PF01761 3-dehydroquinate synthase WS_RS07200 PF02080 TrkA-C domain WS_RS07205 PF01702 Queuine tRNA-ribosyltransferase WS_RS07210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS07225 PF00072 Response regulator receiver domain WS_RS07225 PF00486 Transcriptional regulatory protein, C terminal WS_RS07230 PF13202 EF hand WS_RS07230 PF13499 EF-hand domain pair WS_RS07245 PF05683 Fumarase C-terminus WS_RS07250 PF05681 WS_RS07250 WS_RS07255 PF00392 Bacterial regulatory proteins, gntR family WS_RS07255 PF07729 FCD domain WS_RS07260 PF13509 S1 domain WS_RS07265 PF03831 PhnA protein WS_RS07270 PF01435 Peptidase family M48 WS_RS07275 PF05987 WS_RS07275 WS_RS07285 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase WS_RS07290 PF03061 Thioesterase superfamily WS_RS07295 PF07681 WS_RS07295 WS_RS07300 PF13302 Acetyltransferase (GNAT) domain WS_RS07305 PF00875 DNA photolyase WS_RS07305 PF03441 FAD binding domain of DNA photolyase WS_RS07310 PF04463 WS_RS07310 WS_RS07310 PF08349 WS_RS07310 WS_RS07315 PF02374 Anion-transporting ATPase WS_RS07325 PF02554 WS_RS07325 WS_RS07325 PF13722 WS_RS07325 WS_RS07330 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein WS_RS07335 PF00005 ABC transporter WS_RS07345 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS07350 PF13242 HAD-hyrolase-like WS_RS07350 PF13344 Haloacid dehalogenase-like hydrolase WS_RS07355 PF13489 Methyltransferase domain WS_RS07360 PF00563 EAL domain WS_RS07360 PF00990 GGDEF domain WS_RS07360 PF13426 PAS domain WS_RS07365 PF08534 Redoxin WS_RS07370 PF00578 AhpC/TSA family WS_RS07375 PF00005 ABC transporter WS_RS07380 PF02687 WS_RS07380 WS_RS07385 PF02687 WS_RS07385 WS_RS07385 PF12704 MacB-like periplasmic core domain WS_RS07390 PF04945 YHS domain WS_RS07390 PF10080 WS_RS07390 WS_RS07395 PF10634 Fe2+ transport protein WS_RS07400 PF03239 WS_RS07400 WS_RS07420 PF00122 E1-E2 ATPase WS_RS07420 PF00702 haloacid dehalogenase-like hydrolase WS_RS07440 PF02915 Rubrerythrin WS_RS07450 PF13609 Gram-negative porin WS_RS07455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain WS_RS07455 PF03900 Porphobilinogen deaminase, C-terminal domain WS_RS07460 PF04186 WS_RS07460 WS_RS07465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) WS_RS07465 PF03129 Anticodon binding domain WS_RS07465 PF04073 Aminoacyl-tRNA editing domain WS_RS07470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain WS_RS07470 PF01488 Shikimate / quinate 5-dehydrogenase WS_RS07470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain WS_RS07475 PF00348 Polyprenyl synthetase WS_RS07485 PF09442 Domain of unknown function (DUF2018) WS_RS07490 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WS_RS07490 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WS_RS07495 PF00815 Histidinol dehydrogenase WS_RS07500 PF00571 CBS domain WS_RS07500 PF01595 WS_RS07500 WS_RS07505 PF00210 Ferritin-like domain WS_RS07510 PF00512 His Kinase A (phospho-acceptor) domain WS_RS07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS07515 PF10135 WS_RS07515 WS_RS07520 PF02119 WS_RS07520 WS_RS07535 PF03575 Peptidase family S51 WS_RS07540 PF04371 Porphyromonas-type peptidyl-arginine deiminase WS_RS07550 PF00814 Glycoprotease family WS_RS07555 PF08534 Redoxin WS_RS07560 PF02602 Uroporphyrinogen-III synthase HemD WS_RS07565 PF00117 Glutamine amidotransferase class-I WS_RS07565 PF00958 GMP synthase C terminal domain WS_RS07570 PF00890 FAD binding domain WS_RS07580 PF01541 GIY-YIG catalytic domain WS_RS07580 PF02151 UvrB/uvrC motif WS_RS07580 PF08459 UvrC Helix-hairpin-helix N-terminal WS_RS07590 PF00593 TonB dependent receptor WS_RS07590 PF07715 TonB-dependent Receptor Plug Domain WS_RS07595 PF12900 Pyridoxamine 5'-phosphate oxidase WS_RS07600 PF12833 Helix-turn-helix domain WS_RS07605 PF01844 HNH endonuclease WS_RS07610 PF01867 CRISPR associated protein Cas1 WS_RS07615 PF09827 CRISPR associated protein Cas2 WS_RS07620 PF01930 Domain of unknown function DUF83 WS_RS07635 PF05670 WS_RS07635 WS_RS07635 PF05833 Fibronectin-binding protein A N-terminus (FbpA) WS_RS07640 PF02463 RecF/RecN/SMC N terminal domain WS_RS07645 PF01513 ATP-NAD kinase WS_RS07655 PF00226 DnaJ domain WS_RS07660 PF01925 WS_RS07660 WS_RS07665 PF00005 ABC transporter WS_RS07670 PF00581 Rhodanese-like domain WS_RS07675 PF01590 GAF domain WS_RS07675 PF01966 HD domain WS_RS07685 PF04575 WS_RS07685 WS_RS07685 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 WS_RS07690 PF00211 Adenylate and Guanylate cyclase catalytic domain WS_RS07690 PF05226 WS_RS07690 WS_RS07695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WS_RS07700 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase WS_RS07700 PF14572 Phosphoribosyl synthetase-associated domain WS_RS07705 PF03054 tRNA methyl transferase WS_RS07710 PF01052 Surface presentation of antigens (SPOA) WS_RS07715 PF01052 Surface presentation of antigens (SPOA) WS_RS07715 PF02154 Flagellar motor switch protein FliM WS_RS07720 PF04542 Sigma-70 region 2 WS_RS07720 PF04545 Sigma-70, region 4 WS_RS07730 PF10609 ParA/MinD ATPase like WS_RS07735 PF00448 SRP54-type protein, GTPase domain WS_RS07740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) WS_RS07745 PF00557 Metallopeptidase family M24 WS_RS07750 PF01220 Dehydroquinase class II WS_RS07755 PF02222 ATP-grasp domain WS_RS07760 PF03486 HI0933-like protein WS_RS07765 PF04073 Aminoacyl-tRNA editing domain WS_RS07775 PF00580 UvrD/REP helicase N-terminal domain WS_RS07775 PF13361 UvrD-like helicase C-terminal domain WS_RS07780 PF02623 FliW protein WS_RS07785 PF00133 tRNA synthetases class I (I, L, M and V) WS_RS07785 PF08264 Anticodon-binding domain of tRNA WS_RS07785 PF10458 Valyl tRNA synthetase tRNA binding arm WS_RS07790 PF14681 Uracil phosphoribosyltransferase WS_RS07800 PF00009 Elongation factor Tu GTP binding domain WS_RS07800 PF00679 Elongation factor G C-terminus WS_RS07800 PF03144 Elongation factor Tu domain 2 WS_RS07800 PF06421 GTP-binding protein LepA C-terminus WS_RS07805 PF04055 Radical SAM superfamily WS_RS07805 PF13394 4Fe-4S single cluster domain WS_RS07810 PF06508 Queuosine biosynthesis protein QueC WS_RS07815 PF01242 6-pyruvoyl tetrahydropterin synthase WS_RS07820 PF00004 ATPase family associated with various cellular activities (AAA) WS_RS07825 PF01545 Cation efflux family WS_RS07825 PF16916 WS_RS07825 WS_RS07835 PF00905 Penicillin binding protein transpeptidase domain WS_RS07835 PF03717 Penicillin-binding Protein dimerisation domain WS_RS07840 PF02049 WS_RS07840 WS_RS07845 PF00460 Flagella basal body rod protein WS_RS07845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WS_RS07850 PF00460 Flagella basal body rod protein WS_RS07855 PF01098 WS_RS07855 WS_RS07860 PF00857 Isochorismatase family WS_RS07865 PF13539 D-alanyl-D-alanine carboxypeptidase WS_RS07870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS07875 PF08447 PAS fold WS_RS07880 PF01554 MatE WS_RS07885 PF00795 Carbon-nitrogen hydrolase WS_RS07890 PF00899 ThiF family WS_RS07895 PF01975 Survival protein SurE WS_RS07900 PF00348 Polyprenyl synthetase WS_RS07905 PF13180 PDZ domain WS_RS07910 PF02575 YbaB/EbfC DNA-binding family WS_RS07915 PF02261 Aspartate decarboxylase WS_RS07925 PF01750 Hydrogenase maturation protease WS_RS07930 PF01292 Prokaryotic cytochrome b561 WS_RS07935 PF00374 Nickel-dependent hydrogenase WS_RS07940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WS_RS07940 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal WS_RS07945 PF02875 Mur ligase family, glutamate ligase domain WS_RS07945 PF08245 Mur ligase middle domain WS_RS07955 PF01106 NifU-like domain WS_RS07960 PF01196 Ribosomal protein L17 WS_RS07965 PF01000 RNA polymerase Rpb3/RpoA insert domain WS_RS07965 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain WS_RS07965 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain WS_RS07970 PF00163 Ribosomal protein S4/S9 N-terminal domain WS_RS07970 PF01479 S4 domain WS_RS07975 PF00411 Ribosomal protein S11 WS_RS07980 PF00416 Ribosomal protein S13/S18 WS_RS07985 PF01176 Translation initiation factor 1A / IF-1 WS_RS07990 PF00557 Metallopeptidase family M24 WS_RS07995 PF00344 SecY translocase WS_RS08000 PF00828 Ribosomal protein L18e/L15 WS_RS08005 PF00333 Ribosomal protein S5, N-terminal domain WS_RS08005 PF03719 Ribosomal protein S5, C-terminal domain WS_RS08010 PF00861 Ribosomal L18p/L5e family WS_RS08015 PF00347 Ribosomal protein L6 WS_RS08020 PF00410 Ribosomal protein S8 WS_RS08025 PF00281 Ribosomal protein L5 WS_RS08025 PF00673 ribosomal L5P family C-terminus WS_RS08030 PF00467 KOW motif WS_RS08030 PF17136 WS_RS08030 WS_RS08035 PF00238 Ribosomal protein L14p/L23e WS_RS08040 PF00366 Ribosomal protein S17 WS_RS08045 PF00831 Ribosomal L29 protein WS_RS08050 PF00252 Ribosomal protein L16p/L10e WS_RS08055 PF00189 Ribosomal protein S3, C-terminal domain WS_RS08055 PF07650 KH domain WS_RS08060 PF00237 Ribosomal protein L22p/L17e WS_RS08065 PF00203 Ribosomal protein S19 WS_RS08070 PF00181 Ribosomal Proteins L2, RNA binding domain WS_RS08070 PF03947 Ribosomal Proteins L2, C-terminal domain WS_RS08075 PF00276 Ribosomal protein L23 WS_RS08080 PF00573 Ribosomal protein L4/L1 family WS_RS08085 PF00297 Ribosomal protein L3 WS_RS08090 PF00338 Ribosomal protein S10p/S20e WS_RS08100 PF01351 Ribonuclease HII WS_RS08110 PF11391 WS_RS08110 WS_RS08115 PF04055 Radical SAM superfamily WS_RS08120 PF00534 Glycosyl transferases group 1 WS_RS08120 PF13439 Glycosyltransferase Family 4 WS_RS08125 PF00149 Calcineurin-like phosphoesterase WS_RS08130 PF02582 WS_RS08130 WS_RS08135 PF00072 Response regulator receiver domain WS_RS08135 PF13487 HD domain WS_RS08140 PF00072 Response regulator receiver domain WS_RS08140 PF00497 Bacterial extracellular solute-binding proteins, family 3 WS_RS08140 PF00512 His Kinase A (phospho-acceptor) domain WS_RS08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS08145 PF00293 NUDIX domain WS_RS08150 PF00696 Amino acid kinase family WS_RS08150 PF01842 ACT domain WS_RS08150 PF13840 ACT domain WS_RS08155 PF12163 DNA replication regulator WS_RS08160 PF13177 DNA polymerase III, delta subunit WS_RS08165 PF00809 Pterin binding enzyme WS_RS08175 PF01381 Helix-turn-helix WS_RS08180 PF00183 Hsp90 protein WS_RS08180 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS08185 PF00953 Glycosyl transferase family 4 WS_RS08190 PF00665 Integrase core domain WS_RS08190 PF01527 Transposase WS_RS08190 PF13276 WS_RS08190 WS_RS08195 PF02535 WS_RS08195 WS_RS08200 PF03649 WS_RS08200 WS_RS08205 PF00999 Sodium/hydrogen exchanger family WS_RS08205 PF02080 TrkA-C domain WS_RS08215 PF00578 AhpC/TSA family WS_RS08215 PF10417 C-terminal domain of 1-Cys peroxiredoxin WS_RS08225 PF00174 Oxidoreductase molybdopterin binding domain WS_RS08230 PF01794 WS_RS08230 WS_RS08235 PF02754 WS_RS08235 WS_RS08235 PF13534 4Fe-4S dicluster domain WS_RS08240 PF04055 Radical SAM superfamily WS_RS08240 PF06969 HemN C-terminal domain WS_RS08245 PF10788 WS_RS08245 WS_RS08250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain WS_RS08250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain WS_RS08255 PF01261 Xylose isomerase-like TIM barrel WS_RS08265 PF02169 LPP20 lipoprotein WS_RS08270 PF01973 WS_RS08270 WS_RS08275 PF00460 Flagella basal body rod protein WS_RS08275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WS_RS08275 PF07196 Flagellin hook IN motif WS_RS08275 PF07559 Flagellar basal body protein FlaE WS_RS08280 PF00460 Flagella basal body rod protein WS_RS08280 PF02839 Carbohydrate binding domain WS_RS08280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WS_RS08285 PF03963 WS_RS08285 WS_RS08285 PF13860 FlgD Ig-like domain WS_RS08290 PF02120 Flagellar hook-length control protein FliK WS_RS08295 PF00009 Elongation factor Tu GTP binding domain WS_RS08295 PF00679 Elongation factor G C-terminus WS_RS08295 PF03144 Elongation factor Tu domain 2 WS_RS08300 PF00317 Ribonucleotide reductase, all-alpha domain WS_RS08300 PF02867 Ribonucleotide reductase, barrel domain WS_RS08300 PF03477 ATP cone domain WS_RS08305 PF02562 PhoH-like protein WS_RS08305 PF13638 PIN domain WS_RS08310 PF05681 WS_RS08310 WS_RS08315 PF05683 Fumarase C-terminus WS_RS08320 PF03605 WS_RS08320 WS_RS08325 PF00919 Uncharacterized protein family UPF0004 WS_RS08325 PF04055 Radical SAM superfamily WS_RS08330 PF01171 PP-loop family WS_RS08355 PF04028 WS_RS08355 WS_RS08360 PF00919 Uncharacterized protein family UPF0004 WS_RS08360 PF01938 TRAM domain WS_RS08360 PF04055 Radical SAM superfamily WS_RS08370 PF08529 NusA N-terminal domain WS_RS08370 PF13184 NusA-like KH domain WS_RS08375 PF05538 WS_RS08375 WS_RS08380 PF05538 WS_RS08380 WS_RS08385 PF00152 tRNA synthetases class II (D, K and N) WS_RS08385 PF01336 OB-fold nucleic acid binding domain WS_RS08385 PF02938 GAD domain WS_RS08390 PF00406 Adenylate kinase WS_RS08395 PF00994 Probable molybdopterin binding domain WS_RS08400 PF00719 Inorganic pyrophosphatase WS_RS08405 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WS_RS08410 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WS_RS08415 PF00072 Response regulator receiver domain WS_RS08415 PF01584 CheW-like domain WS_RS08420 PF00533 BRCA1 C Terminus (BRCT) domain WS_RS08420 PF01653 NAD-dependent DNA ligase adenylation domain WS_RS08420 PF03119 NAD-dependent DNA ligase C4 zinc finger domain WS_RS08420 PF03120 NAD-dependent DNA ligase OB-fold domain WS_RS08420 PF12826 Helix-hairpin-helix motif WS_RS08420 PF14520 Helix-hairpin-helix domain WS_RS08425 PF01171 PP-loop family WS_RS08430 PF07690 Major Facilitator Superfamily WS_RS08435 PF01725 Ham1 family WS_RS08450 PF00072 Response regulator receiver domain WS_RS08450 PF00486 Transcriptional regulatory protein, C terminal WS_RS08455 PF09335 WS_RS08455 WS_RS08460 PF00460 Flagella basal body rod protein WS_RS08460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WS_RS08465 PF00460 Flagella basal body rod protein WS_RS08465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal WS_RS08470 PF00005 ABC transporter WS_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS08490 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WS_RS08490 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WS_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS08500 PF13531 Bacterial extracellular solute-binding protein WS_RS08505 PF13531 Bacterial extracellular solute-binding protein WS_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WS_RS08510 PF03459 TOBE domain WS_RS08515 PF00694 Aconitase C-terminal domain WS_RS08520 PF00180 Isocitrate/isopropylmalate dehydrogenase WS_RS08540 PF00072 Response regulator receiver domain WS_RS08540 PF00486 Transcriptional regulatory protein, C terminal WS_RS08545 PF00672 HAMP domain WS_RS08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS08550 PF01743 Poly A polymerase head domain WS_RS08560 PF00490 Delta-aminolevulinic acid dehydratase WS_RS08565 PF04972 BON domain WS_RS08570 PF01810 WS_RS08570 WS_RS08575 PF01594 WS_RS08575 WS_RS08580 PF05491 Holliday junction DNA helicase ruvB C-terminus WS_RS08580 PF05496 Holliday junction DNA helicase ruvB N-terminus WS_RS08585 PF02548 Ketopantoate hydroxymethyltransferase WS_RS08590 PF00290 Tryptophan synthase alpha chain WS_RS08595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain WS_RS08595 PF02770 Acyl-CoA dehydrogenase, middle domain WS_RS08595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain WS_RS08600 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein WS_RS08605 PF01717 Cobalamin-independent synthase, Catalytic domain WS_RS08610 PF02566 OsmC-like protein WS_RS08615 PF02589 Uncharacterised ACR, YkgG family COG1556 WS_RS08625 PF07450 WS_RS08625 WS_RS08630 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit WS_RS08635 PF12838 4Fe-4S dicluster domain WS_RS08640 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit WS_RS08640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit WS_RS08640 PF00374 Nickel-dependent hydrogenase WS_RS08645 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WS_RS08650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L WS_RS08655 PF00146 NADH dehydrogenase WS_RS08660 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains WS_RS08665 PF13187 4Fe-4S dicluster domain WS_RS08670 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 WS_RS08670 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain WS_RS08675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS08680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain WS_RS08680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain WS_RS08690 PF00384 Molybdopterin oxidoreductase WS_RS08690 PF01568 Molydopterin dinucleotide binding domain WS_RS08705 PF02322 WS_RS08705 WS_RS08710 PF01654 WS_RS08710 WS_RS08715 PF14899 WS_RS08715 WS_RS08735 PF00474 Sodium:solute symporter family WS_RS08745 PF03480 Bacterial extracellular solute-binding protein, family 7 WS_RS08750 PF04290 WS_RS08750 WS_RS08755 PF06808 WS_RS08755 WS_RS08760 PF09335 WS_RS08760 WS_RS08765 PF02698 DUF218 domain WS_RS08770 PF01384 WS_RS08770 WS_RS08775 PF00072 Response regulator receiver domain WS_RS08775 PF01584 CheW-like domain WS_RS08780 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain WS_RS08780 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain WS_RS08785 PF01084 Ribosomal protein S18 WS_RS08790 PF00436 Single-strand binding protein family WS_RS08795 PF01250 Ribosomal protein S6 WS_RS08805 PF00773 RNB domain WS_RS08805 PF08206 Ribonuclease B OB domain WS_RS08810 PF08668 HDOD domain WS_RS08815 PF00311 Phosphoenolpyruvate carboxylase WS_RS08820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain WS_RS08820 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain WS_RS08825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain WS_RS08830 PF03776 Septum formation topological specificity factor MinE WS_RS08835 PF04748 Divergent polysaccharide deacetylase WS_RS08840 PF00400 WD domain, G-beta repeat WS_RS08845 PF02481 DNA recombination-mediator protein A WS_RS08850 PF03652 Uncharacterised protein family (UPF0081) WS_RS08855 PF01808 AICARFT/IMPCHase bienzyme WS_RS08855 PF02142 MGS-like domain WS_RS08860 PF00202 Aminotransferase class-III WS_RS08865 PF09527 WS_RS08865 WS_RS08880 PF00140 Sigma-70 factor, region 1 WS_RS08880 PF04539 Sigma-70 region 3 WS_RS08880 PF04542 Sigma-70 region 2 WS_RS08880 PF04545 Sigma-70, region 4 WS_RS08885 PF00795 Carbon-nitrogen hydrolase WS_RS08890 PF02609 Exonuclease VII small subunit WS_RS08895 PF00561 alpha/beta hydrolase fold WS_RS08900 PF01053 Cys/Met metabolism PLP-dependent enzyme WS_RS08905 PF00478 IMP dehydrogenase / GMP reductase domain WS_RS08905 PF00571 CBS domain WS_RS08910 PF01425 Amidase WS_RS08915 PF01264 Chorismate synthase WS_RS08920 PF00035 Double-stranded RNA binding motif WS_RS08920 PF14622 Ribonuclease-III-like WS_RS08925 PF00075 RNase H WS_RS08930 PF13176 Tetratricopeptide repeat WS_RS08930 PF13432 Tetratricopeptide repeat WS_RS08935 PF01807 CHC2 zinc finger WS_RS08935 PF08275 DNA primase catalytic core, N-terminal domain WS_RS08935 PF10410 DnaB-helicase binding domain of primase WS_RS08935 PF13662 Toprim domain WS_RS08935 PF16730 WS_RS08935 WS_RS08940 PF02568 Thiamine biosynthesis protein (ThiI) WS_RS08950 PF01522 Polysaccharide deacetylase WS_RS08955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WS_RS08960 PF00535 Glycosyl transferase family 2 WS_RS08965 PF03279 WS_RS08965 WS_RS08970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WS_RS08975 PF02541 Ppx/GppA phosphatase family WS_RS08980 PF13187 4Fe-4S dicluster domain WS_RS08985 PF00218 Indole-3-glycerol phosphate synthase WS_RS08995 PF03692 WS_RS08995 WS_RS09000 PF05175 Methyltransferase small domain WS_RS09005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS09005 PF17200 WS_RS09005 WS_RS09010 PF02348 Cytidylyltransferase WS_RS09020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WS_RS09020 PF03466 LysR substrate binding domain WS_RS09025 PF00890 FAD binding domain WS_RS09025 PF02910 Fumarate reductase flavoprotein C-term WS_RS09030 PF13085 2Fe-2S iron-sulfur cluster binding domain WS_RS09030 PF13183 4Fe-4S dicluster domain WS_RS09035 PF02754 WS_RS09035 WS_RS09040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS09040 PF12729 WS_RS09040 WS_RS09045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WS_RS09045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain WS_RS09055 PF00239 Resolvase, N terminal domain WS_RS09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS09060 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS09075 PF02384 N-6 DNA Methylase WS_RS09080 PF00665 Integrase core domain WS_RS09090 PF03797 Autotransporter beta-domain WS_RS09100 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term WS_RS09105 PF04608 Phosphatidylglycerophosphatase A WS_RS09110 PF01747 ATP-sulfurylase WS_RS09110 PF14306 PUA-like domain WS_RS09115 PF00072 Response regulator receiver domain WS_RS09120 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase WS_RS09120 PF02542 YgbB family WS_RS09125 PF01964 ThiC family WS_RS09130 PF01883 Domain of unknown function DUF59 WS_RS09130 PF10609 ParA/MinD ATPase like WS_RS09135 PF00005 ABC transporter WS_RS09135 PF09383 NIL domain WS_RS09140 PF00528 Binding-protein-dependent transport system inner membrane component WS_RS09145 PF03180 NLPA lipoprotein WS_RS09155 PF03458 WS_RS09155 WS_RS09160 PF00132 Bacterial transferase hexapeptide (six repeats) WS_RS09165 PF02503 Polyphosphate kinase middle domain WS_RS09165 PF13089 Polyphosphate kinase N-terminal domain WS_RS09165 PF13090 Polyphosphate kinase C-terminal domain WS_RS09170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS09170 PF12729 WS_RS09170 WS_RS09175 PF07690 Major Facilitator Superfamily WS_RS09180 PF00593 TonB dependent receptor WS_RS09180 PF07715 TonB-dependent Receptor Plug Domain WS_RS09185 PF00072 Response regulator receiver domain WS_RS09185 PF00486 Transcriptional regulatory protein, C terminal WS_RS09190 PF00672 HAMP domain WS_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS09190 PF07568 WS_RS09190 WS_RS09190 PF08269 Cache domain WS_RS09195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS09200 PF00665 Integrase core domain WS_RS09200 PF01527 Transposase WS_RS09200 PF13276 WS_RS09200 WS_RS09205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS09215 PF00271 Helicase conserved C-terminal domain WS_RS09215 PF02151 UvrB/uvrC motif WS_RS09215 PF04851 Type III restriction enzyme, res subunit WS_RS09215 PF12344 Ultra-violet resistance protein B WS_RS09230 PF00270 DEAD/DEAH box helicase WS_RS09230 PF00271 Helicase conserved C-terminal domain WS_RS09240 PF03602 Conserved hypothetical protein 95 WS_RS09245 PF13432 Tetratricopeptide repeat WS_RS09255 PF02405 WS_RS09255 WS_RS09260 PF03748 WS_RS09260 WS_RS09265 PF01648 4'-phosphopantetheinyl transferase superfamily WS_RS09270 PF00004 ATPase family associated with various cellular activities (AAA) WS_RS09270 PF02190 ATP-dependent protease La (LON) domain WS_RS09270 PF05362 Lon protease (S16) C-terminal proteolytic domain WS_RS09275 PF13525 Outer membrane lipoprotein WS_RS09280 PF02623 FliW protein WS_RS09285 PF14748 Pyrroline-5-carboxylate reductase dimerisation WS_RS09290 PF01715 IPP transferase WS_RS09295 PF01553 Acyltransferase WS_RS09295 PF13444 Acetyltransferase (GNAT) domain WS_RS09305 PF00849 RNA pseudouridylate synthase WS_RS09305 PF01479 S4 domain WS_RS09310 PF00005 ABC transporter WS_RS09310 PF00664 ABC transporter transmembrane region WS_RS09315 PF00072 Response regulator receiver domain WS_RS09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS09315 PF08448 PAS fold WS_RS09315 PF13426 PAS domain WS_RS09320 PF01253 Translation initiation factor SUI1 WS_RS09325 PF02811 PHP domain WS_RS09325 PF07733 Bacterial DNA polymerase III alpha subunit WS_RS09325 PF14579 Helix-hairpin-helix motif WS_RS09335 PF01882 WS_RS09335 WS_RS09340 PF07726 ATPase family associated with various cellular activities (AAA) WS_RS09345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal WS_RS09345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III WS_RS09350 PF02504 Fatty acid synthesis protein WS_RS09355 PF01783 Ribosomal L32p protein family WS_RS09360 PF02620 WS_RS09360 WS_RS09365 PF00334 Nucleoside diphosphate kinase WS_RS09370 PF12838 4Fe-4S dicluster domain WS_RS09375 PF00438 S-adenosylmethionine synthetase, N-terminal domain WS_RS09375 PF02772 S-adenosylmethionine synthetase, central domain WS_RS09375 PF02773 S-adenosylmethionine synthetase, C-terminal domain WS_RS09380 PF00578 AhpC/TSA family WS_RS09380 PF10417 C-terminal domain of 1-Cys peroxiredoxin WS_RS09385 PF02779 Transketolase, pyrimidine binding domain WS_RS09385 PF02780 Transketolase, C-terminal domain WS_RS09385 PF13292 1-deoxy-D-xylulose-5-phosphate synthase WS_RS09390 PF02108 WS_RS09390 WS_RS09395 PF01706 FliG C-terminal domain WS_RS09395 PF14841 FliG middle domain WS_RS09395 PF14842 FliG N-terminal domain WS_RS09400 PF01514 Secretory protein of YscJ/FliF family WS_RS09400 PF08345 WS_RS09400 WS_RS09405 PF00155 Aminotransferase class I and II WS_RS09410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain WS_RS09410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I WS_RS09410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II WS_RS09410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III WS_RS09415 PF04909 Amidohydrolase WS_RS09420 PF00581 Rhodanese-like domain WS_RS09425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus WS_RS09425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus WS_RS09430 PF02637 GatB domain WS_RS09430 PF02934 GatB/GatE catalytic domain WS_RS09435 PF04055 Radical SAM superfamily WS_RS09435 PF06463 Molybdenum Cofactor Synthesis C WS_RS09435 PF13353 4Fe-4S single cluster domain WS_RS09440 PF12804 MobA-like NTP transferase domain WS_RS09445 PF13899 Thioredoxin-like WS_RS09450 PF01312 FlhB HrpN YscU SpaS Family WS_RS09455 PF01368 DHH family WS_RS09460 PF01551 Peptidase family M23 WS_RS09465 PF03775 Septum formation inhibitor MinC, C-terminal domain WS_RS09470 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase WS_RS09480 PF00288 GHMP kinases N terminal domain WS_RS09480 PF08544 GHMP kinases C terminal WS_RS09485 PF00009 Elongation factor Tu GTP binding domain WS_RS09485 PF04760 Translation initiation factor IF-2, N-terminal region WS_RS09485 PF11987 Translation-initiation factor 2 WS_RS09490 PF02033 Ribosome-binding factor A WS_RS09495 PF02576 Uncharacterised BCR, YhbC family COG0779 WS_RS09500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region WS_RS09500 PF01872 RibD C-terminal domain WS_RS09505 PF03886 Protein of unknown function (DUF330) WS_RS09515 PF00005 ABC transporter WS_RS09520 PF02405 WS_RS09520 WS_RS09525 PF08447 PAS fold WS_RS09530 PF09837 Uncharacterized protein conserved in bacteria (DUF2064) WS_RS09550 PF00589 Phage integrase family WS_RS09550 PF02899 Phage integrase, N-terminal SAM-like domain WS_RS09595 PF08245 Mur ligase middle domain WS_RS09600 PF00953 Glycosyl transferase family 4 WS_RS09600 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 WS_RS09605 PF01676 Metalloenzyme superfamily WS_RS09605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) WS_RS09610 PF01926 50S ribosome-binding GTPase WS_RS09610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal WS_RS09620 PF00892 EamA-like transporter family WS_RS09625 PF01475 Ferric uptake regulator family WS_RS09630 PF10087 WS_RS09630 WS_RS09635 PF07992 Pyridine nucleotide-disulphide oxidoreductase WS_RS09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS09645 PF00072 Response regulator receiver domain WS_RS09645 PF00486 Transcriptional regulatory protein, C terminal WS_RS09650 PF00155 Aminotransferase class I and II WS_RS09655 PF00905 Penicillin binding protein transpeptidase domain WS_RS09655 PF00912 Transglycosylase WS_RS09660 PF00117 Glutamine amidotransferase class-I WS_RS09660 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain WS_RS09665 PF04368 WS_RS09665 WS_RS09670 PF01966 HD domain WS_RS09670 PF13286 Phosphohydrolase-associated domain WS_RS09685 PF03448 MgtE intracellular N domain WS_RS09690 PF02050 Flagellar FliJ protein WS_RS09695 PF00709 Adenylosuccinate synthetase WS_RS09700 PF13393 Histidyl-tRNA synthetase WS_RS09705 PF01255 Putative undecaprenyl diphosphate synthase WS_RS09715 PF02441 Flavoprotein WS_RS09715 PF04127 DNA / pantothenate metabolism flavoprotein WS_RS09720 PF02719 Polysaccharide biosynthesis protein WS_RS09725 PF00905 Penicillin binding protein transpeptidase domain WS_RS09725 PF03717 Penicillin-binding Protein dimerisation domain WS_RS09735 PF13508 Acetyltransferase (GNAT) domain WS_RS09740 PF01926 50S ribosome-binding GTPase WS_RS09745 PF03968 OstA-like protein WS_RS09755 PF08282 haloacid dehalogenase-like hydrolase WS_RS09760 PF00475 Imidazoleglycerol-phosphate dehydratase WS_RS09765 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel WS_RS09765 PF05036 Sporulation related domain WS_RS09770 PF01464 Transglycosylase SLT domain WS_RS09770 PF01476 LysM domain WS_RS09775 PF01026 TatD related DNase WS_RS09785 PF00677 Lumazine binding domain WS_RS09790 PF01312 FlhB HrpN YscU SpaS Family WS_RS09795 PF03739 WS_RS09795 WS_RS09800 PF01195 Peptidyl-tRNA hydrolase WS_RS09805 PF01386 Ribosomal L25p family WS_RS09805 PF14693 Ribosomal protein TL5, C-terminal domain WS_RS09810 PF00923 Transaldolase WS_RS09815 PF00702 haloacid dehalogenase-like hydrolase WS_RS09820 PF01584 CheW-like domain WS_RS09825 PF00072 Response regulator receiver domain WS_RS09825 PF01584 CheW-like domain WS_RS09825 PF01627 Hpt domain WS_RS09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS09825 PF02895 Signal transducing histidine kinase, homodimeric domain WS_RS09830 PF00072 Response regulator receiver domain WS_RS09830 PF01584 CheW-like domain WS_RS09835 PF00149 Calcineurin-like phosphoesterase WS_RS09840 PF01118 Semialdehyde dehydrogenase, NAD binding domain WS_RS09840 PF02774 Semialdehyde dehydrogenase, dimerisation domain WS_RS09845 PF02597 ThiS family WS_RS09855 PF12804 MobA-like NTP transferase domain WS_RS09855 PF14602 Hexapeptide repeat of succinyl-transferase WS_RS09860 PF01618 WS_RS09860 WS_RS09865 PF00691 OmpA family WS_RS09865 PF13677 WS_RS09865 WS_RS09870 PF00813 WS_RS09870 WS_RS09875 PF05958 tRNA (Uracil-5-)-methyltransferase WS_RS09885 PF13177 DNA polymerase III, delta subunit WS_RS09890 PF00591 Glycosyl transferase family, a/b domain WS_RS09895 PF02367 Uncharacterised P-loop hydrolase UPF0079 WS_RS09900 PF00005 ABC transporter WS_RS09905 PF00309 WS_RS09905 WS_RS09905 PF04552 Sigma-54, DNA binding domain WS_RS09905 PF04963 Sigma-54 factor, core binding domain WS_RS09915 PF01258 Prokaryotic dksA/traR C4-type zinc finger WS_RS09920 PF11756 WS_RS09920 WS_RS09925 PF09424 Yqey-like protein WS_RS09930 PF02107 WS_RS09930 WS_RS09935 PF02348 Cytidylyltransferase WS_RS09945 PF13420 Acetyltransferase (GNAT) domain WS_RS09950 PF03102 NeuB family WS_RS09950 PF08666 SAF domain WS_RS09955 PF00291 Pyridoxal-phosphate dependent enzyme WS_RS09955 PF14821 Threonine synthase N terminus WS_RS09960 PF01790 WS_RS09960 WS_RS09970 PF00072 Response regulator receiver domain WS_RS09970 PF07228 Stage II sporulation protein E (SpoIIE) WS_RS09970 PF13581 Histidine kinase-like ATPase domain WS_RS09975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS09975 PF00672 HAMP domain WS_RS09980 PF00849 RNA pseudouridylate synthase WS_RS09985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) WS_RS09990 PF02591 Putative zinc ribbon domain WS_RS09995 PF02091 Glycyl-tRNA synthetase alpha subunit WS_RS10000 PF01937 Protein of unknown function DUF89 WS_RS10005 PF13118 WS_RS10005 WS_RS10010 PF00731 AIR carboxylase WS_RS10015 PF01136 WS_RS10015 WS_RS10025 PF00120 Glutamine synthetase, catalytic domain WS_RS10025 PF03951 Glutamine synthetase, beta-Grasp domain WS_RS10030 PF00106 short chain dehydrogenase WS_RS10035 PF02664 S-Ribosylhomocysteinase (LuxS) WS_RS10040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain WS_RS10050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg WS_RS10050 PF17147 WS_RS10050 WS_RS10055 PF14697 4Fe-4S dicluster domain WS_RS10060 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase WS_RS10065 PF13419 Haloacid dehalogenase-like hydrolase WS_RS10070 PF01554 MatE WS_RS10075 PF00380 Ribosomal protein S9/S16 WS_RS10080 PF00572 Ribosomal protein L13 WS_RS10090 PF00696 Amino acid kinase family WS_RS10095 PF04055 Radical SAM superfamily WS_RS10095 PF12345 WS_RS10095 WS_RS10095 PF13353 4Fe-4S single cluster domain WS_RS10105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain WS_RS10105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain WS_RS10115 PF01300 Telomere recombination WS_RS10120 PF02142 MGS-like domain WS_RS10120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain WS_RS10120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WS_RS10125 PF01564 Spermine/spermidine synthase WS_RS10130 PF01121 Dephospho-CoA kinase WS_RS10135 PF01678 Diaminopimelate epimerase WS_RS10140 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase WS_RS10145 PF00355 Rieske [2Fe-2S] domain WS_RS10145 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal WS_RS10150 PF00032 Cytochrome b(C-terminal)/b6/petD WS_RS10150 PF00033 Cytochrome b(N-terminal)/b6/petB WS_RS10155 PF00034 Cytochrome c WS_RS10155 PF02167 Cytochrome C1 family WS_RS10160 PF04452 RNA methyltransferase WS_RS10170 PF00762 Ferrochelatase WS_RS10175 PF13098 Thioredoxin-like domain WS_RS10180 PF01578 WS_RS10180 WS_RS10180 PF05140 WS_RS10180 WS_RS10185 PF01479 S4 domain WS_RS10195 PF00764 Arginosuccinate synthase WS_RS10200 PF00586 AIR synthase related protein, N-terminal domain WS_RS10200 PF02769 AIR synthase related protein, C-terminal domain WS_RS10205 PF13401 AAA domain WS_RS10210 PF06347 Bacterial SH3 domain WS_RS10215 PF01488 Shikimate / quinate 5-dehydrogenase WS_RS10215 PF08501 Shikimate dehydrogenase substrate binding domain WS_RS10220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein WS_RS10220 PF16321 WS_RS10220 WS_RS10225 PF00122 E1-E2 ATPase WS_RS10225 PF00403 Heavy-metal-associated domain WS_RS10225 PF00702 haloacid dehalogenase-like hydrolase WS_RS10225 PF12156 WS_RS10225 WS_RS10230 PF00117 Glutamine amidotransferase class-I WS_RS10235 PF01699 Sodium/calcium exchanger protein WS_RS10240 PF00563 EAL domain WS_RS10245 PF00156 Phosphoribosyl transferase domain WS_RS10250 PF00860 Permease family WS_RS10255 PF04055 Radical SAM superfamily WS_RS10260 PF12804 MobA-like NTP transferase domain WS_RS10265 PF07722 Peptidase C26 WS_RS10270 PF00391 PEP-utilising enzyme, mobile domain WS_RS10275 PF08241 Methyltransferase domain WS_RS10280 PF01583 Adenylylsulphate kinase WS_RS10285 PF13578 Methyltransferase domain WS_RS10290 PF04007 WS_RS10290 WS_RS10295 PF00733 Asparagine synthase WS_RS10295 PF13537 Glutamine amidotransferase domain WS_RS10300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family WS_RS10305 PF00132 Bacterial transferase hexapeptide (six repeats) WS_RS10310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold WS_RS10310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain WS_RS10315 PF02350 UDP-N-acetylglucosamine 2-epimerase WS_RS10320 PF13439 Glycosyltransferase Family 4 WS_RS10330 PF00733 Asparagine synthase WS_RS10330 PF13537 Glutamine amidotransferase domain WS_RS10335 PF04055 Radical SAM superfamily WS_RS10340 PF08241 Methyltransferase domain WS_RS10355 PF00669 Bacterial flagellin N-terminal helical region WS_RS10355 PF00700 Bacterial flagellin C-terminal helical region WS_RS10355 PF07196 Flagellin hook IN motif WS_RS10360 PF01973 WS_RS10360 WS_RS10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10370 PF00072 Response regulator receiver domain WS_RS10370 PF00486 Transcriptional regulatory protein, C terminal WS_RS10375 PF05573 NosL WS_RS10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family WS_RS10380 PF03466 LysR substrate binding domain WS_RS10385 PF03601 WS_RS10385 WS_RS10390 PF01106 NifU-like domain WS_RS10390 PF01592 NifU-like N terminal domain WS_RS10390 PF04324 BFD-like [2Fe-2S] binding domain WS_RS10395 PF00266 Aminotransferase class-V WS_RS10400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain WS_RS10405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase WS_RS10405 PF05697 Bacterial trigger factor protein (TF) WS_RS10405 PF05698 Bacterial trigger factor protein (TF) C-terminus WS_RS10410 PF00574 Clp protease WS_RS10415 PF00990 GGDEF domain WS_RS10420 PF01327 Polypeptide deformylase WS_RS10425 PF01078 Magnesium chelatase, subunit ChlI WS_RS10425 PF13335 WS_RS10425 WS_RS10425 PF13541 Subunit ChlI of Mg-chelatase WS_RS10430 PF00005 ABC transporter WS_RS10430 PF12848 ABC transporter WS_RS10435 PF04264 YceI-like domain WS_RS10440 PF00749 tRNA synthetases class I (E and Q), catalytic domain WS_RS10450 PF01180 Dihydroorotate dehydrogenase WS_RS10455 PF00675 Insulinase (Peptidase family M16) WS_RS10455 PF05193 Peptidase M16 inactive domain WS_RS10460 PF00701 Dihydrodipicolinate synthetase family WS_RS10465 PF13561 Enoyl-(Acyl carrier protein) reductase WS_RS10470 PF01066 CDP-alcohol phosphatidyltransferase WS_RS10475 PF02163 Peptidase family M50 WS_RS10475 PF13180 PDZ domain WS_RS10480 PF01168 Alanine racemase, N-terminal domain WS_RS10485 PF13180 PDZ domain WS_RS10485 PF13365 Trypsin-like peptidase domain WS_RS10495 PF02511 Thymidylate synthase complementing protein WS_RS10500 PF02075 Crossover junction endodeoxyribonuclease RuvC WS_RS10510 PF02253 Phospholipase A1 WS_RS10515 PF01584 CheW-like domain WS_RS10520 PF00072 Response regulator receiver domain WS_RS10520 PF00563 EAL domain WS_RS10520 PF00990 GGDEF domain WS_RS10520 PF13426 PAS domain WS_RS10525 PF00534 Glycosyl transferases group 1 WS_RS10525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) WS_RS10525 PF13439 Glycosyltransferase Family 4 WS_RS10530 PF00072 Response regulator receiver domain WS_RS10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10530 PF08447 PAS fold WS_RS10530 PF13188 PAS domain WS_RS10535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS10535 PF10442 WS_RS10535 WS_RS10540 PF08495 WS_RS10540 WS_RS10545 PF07963 Prokaryotic N-terminal methylation motif WS_RS10555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10555 PF08448 PAS fold WS_RS10560 PF00149 Calcineurin-like phosphoesterase WS_RS10565 PF03916 WS_RS10565 WS_RS10570 PF00563 EAL domain WS_RS10570 PF00990 GGDEF domain WS_RS10570 PF13426 PAS domain WS_RS10575 PF00990 GGDEF domain WS_RS10580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS10580 PF12729 WS_RS10580 WS_RS10585 PF00072 Response regulator receiver domain WS_RS10585 PF00497 Bacterial extracellular solute-binding proteins, family 3 WS_RS10585 PF00512 His Kinase A (phospho-acceptor) domain WS_RS10585 PF01627 Hpt domain WS_RS10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10585 PF09084 NMT1/THI5 like WS_RS10590 PF02690 WS_RS10590 WS_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10600 PF14827 Sensory domain of two-component sensor kinase WS_RS10605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain WS_RS10605 PF12729 WS_RS10605 WS_RS10615 PF00571 CBS domain WS_RS10615 PF00990 GGDEF domain WS_RS10615 PF08447 PAS fold WS_RS10615 PF13188 PAS domain WS_RS10615 PF13426 PAS domain WS_RS10625 PF03544 Gram-negative bacterial TonB protein C-terminal WS_RS10630 PF04273 Putative phosphatase (DUF442) WS_RS10635 PF00990 GGDEF domain WS_RS10635 PF08269 Cache domain WS_RS10635 PF08447 PAS fold WS_RS10640 PF00512 His Kinase A (phospho-acceptor) domain WS_RS10640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10645 PF01863 Protein of unknown function DUF45 WS_RS10650 PF00072 Response regulator receiver domain WS_RS10650 PF13426 PAS domain WS_RS10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10655 PF08447 PAS fold WS_RS10655 PF13188 PAS domain WS_RS10655 PF13426 PAS domain WS_RS10655 PF14827 Sensory domain of two-component sensor kinase WS_RS10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10660 PF08448 PAS fold WS_RS10665 PF00350 Dynamin family WS_RS10675 PF03544 Gram-negative bacterial TonB protein C-terminal WS_RS10680 PF13682 Chemoreceptor zinc-binding domain WS_RS10685 PF01814 Hemerythrin HHE cation binding domain WS_RS10690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain WS_RS10695 PF00672 HAMP domain WS_RS10695 PF00990 GGDEF domain WS_RS10705 PF12833 Helix-turn-helix domain WS_RS10710 PF04773 FecR protein WS_RS10720 PF03459 TOBE domain WS_RS10725 PF00990 GGDEF domain WS_RS10725 PF14827 Sensory domain of two-component sensor kinase WS_RS10730 PF02579 Dinitrogenase iron-molybdenum cofactor WS_RS10735 PF02001 WS_RS10735 WS_RS10735 PF02579 Dinitrogenase iron-molybdenum cofactor WS_RS10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase WS_RS10745 PF13188 PAS domain WS_RS10745 PF13426 PAS domain WS_RS10760 PF04773 FecR protein WS_RS10765 PF02470 WS_RS10765 WS_RS10770 PF00072 Response regulator receiver domain WS_RS10775 PF00563 EAL domain WS_RS10775 PF00990 GGDEF domain WS_RS10775 PF04392 ABC transporter substrate binding protein WS_RS10780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain