WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 143 445 1.3E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 1.6E-27 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 PRINTS PR00419 Adrenodoxin reductase family signature 283 297 1.6E-27 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 PRINTS PR00419 Adrenodoxin reductase family signature 208 218 1.6E-27 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 PRINTS PR00419 Adrenodoxin reductase family signature 317 330 1.6E-27 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 1.6E-27 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 128 1.1E-34 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 SUPERFAMILY SSF51971 367 457 5.06E-13 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 SUPERFAMILY SSF51971 141 393 8.24E-64 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 Gene3D G3DSA:3.50.50.60 232 393 2.6E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 Gene3D G3DSA:1.10.1060.10 2 144 2.7E-40 T 11-11-2016 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 3 457 3.4E-167 T 11-11-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 Gene3D G3DSA:3.40.50.720 145 231 1.8E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 Gene3D G3DSA:3.40.50.720 397 458 1.8E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS05750 82997fcb5ba0753029c49ab04cf3b6e1 460 SUPERFAMILY SSF46548 3 152 2.09E-35 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 WS_RS05950 0bfe5a64456b313754a4f7fc04013801 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 316 475 5.7E-48 T 11-11-2016 IPR000160 GGDEF domain WS_RS05950 0bfe5a64456b313754a4f7fc04013801 480 SUPERFAMILY SSF55073 323 476 3.45E-45 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS05950 0bfe5a64456b313754a4f7fc04013801 480 SMART SM00267 304 478 1.1E-51 T 11-11-2016 IPR000160 GGDEF domain WS_RS05950 0bfe5a64456b313754a4f7fc04013801 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 474 1.7E-41 T 11-11-2016 IPR000160 GGDEF domain WS_RS05950 0bfe5a64456b313754a4f7fc04013801 480 Gene3D G3DSA:3.30.70.270 320 476 1.1E-47 T 11-11-2016 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 SMART SM00387 391 501 1.4E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 SUPERFAMILY SSF55785 150 250 8.76E-7 T 11-11-2016 IPR000014 PAS domain WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 349 5.8E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 SUPERFAMILY SSF52172 9 173 2.7E-28 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 495 5.8E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Gene3D G3DSA:1.10.287.130 272 335 9.1E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 SUPERFAMILY SSF47384 267 351 3.53E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Pfam PF00072 Response regulator receiver domain 12 118 4.8E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Pfam PF13426 PAS domain 156 250 7.6E-7 T 11-11-2016 IPR000014 PAS domain WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 SMART SM00388 278 349 1.3E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 SMART SM00448 10 122 1.4E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Gene3D G3DSA:3.40.50.2300 8 134 4.8E-26 T 11-11-2016 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Gene3D G3DSA:3.30.565.10 336 494 9.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 Gene3D G3DSA:3.30.450.20 151 250 3.2E-8 T 11-11-2016 WS_RS06560 d61953c7f87d78103fb5e8577f64af01 509 SUPERFAMILY SSF55874 339 495 2.62E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SMART SM01058 357 454 4.7E-37 T 11-11-2016 IPR003711 CarD-like/TRCF domain WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Gene3D G3DSA:3.40.50.300 471 661 5.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 7 988 24.782 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SUPERFAMILY SSF52540 530 799 2.61E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SUPERFAMILY SSF143517 867 972 3.66E-24 T 11-11-2016 WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Gene3D G3DSA:3.30.2060.10 104 175 2.1E-8 T 11-11-2016 WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Pfam PF02559 CarD-like/TRCF domain 358 452 4.0E-21 T 11-11-2016 IPR003711 CarD-like/TRCF domain WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SUPERFAMILY SSF52540 17 194 7.59E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Pfam PF03461 TRCF domain 880 970 7.1E-19 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Gene3D G3DSA:3.40.50.300 670 839 4.3E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SMART SM00487 478 666 1.4E-29 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SMART SM00982 879 979 1.4E-29 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 325 952 1.8E-253 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Pfam PF00270 DEAD/DEAH box helicase 483 641 3.8E-19 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SMART SM00490 703 786 2.6E-19 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 Pfam PF00271 Helicase conserved C-terminal domain 677 785 3.4E-18 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS05930 f9ad9435e5f230d230410ae2d921e83e 994 SUPERFAMILY SSF141259 352 426 4.58E-19 T 11-11-2016 IPR003711 CarD-like/TRCF domain WS_RS09415 d8140ce6526e53c745782aea313c0782 337 PIRSF PIRSF001237 1 336 2.8E-116 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 WS_RS09415 d8140ce6526e53c745782aea313c0782 337 SUPERFAMILY SSF51556 1 334 9.98E-99 T 11-11-2016 IPR032466 Metal-dependent hydrolase WS_RS09415 d8140ce6526e53c745782aea313c0782 337 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 WS_RS09415 d8140ce6526e53c745782aea313c0782 337 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 333 7.8E-112 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 WS_RS09415 d8140ce6526e53c745782aea313c0782 337 Pfam PF04909 Amidohydrolase 78 297 9.9E-9 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 WS_RS09415 d8140ce6526e53c745782aea313c0782 337 ProSitePatterns PS00483 Dihydroorotase signature 2. 240 251 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 WS_RS09415 d8140ce6526e53c745782aea313c0782 337 Gene3D G3DSA:3.20.20.140 2 333 7.7E-92 T 11-11-2016 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 Gene3D G3DSA:2.40.50.140 369 434 5.0E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 Pfam PF04055 Radical SAM superfamily 143 312 9.4E-19 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 Pfam PF00919 Uncharacterized protein family UPF0004 4 99 1.1E-24 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 390 6.0E-103 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 Gene3D G3DSA:3.80.30.20 138 365 1.9E-66 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 SUPERFAMILY SSF102114 133 359 1.96E-45 T 11-11-2016 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 433 59.351 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 407 5.4E-123 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 WS_RS08325 fa562bf5c679fa132c32ab289e93aa5b 439 SMART SM00729 137 354 2.2E-43 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS05860 7681d2bd61bbc3e7160b1e571c180d2b 208 SUPERFAMILY SSF46689 3 78 4.99E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05860 7681d2bd61bbc3e7160b1e571c180d2b 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 9.8E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS05860 7681d2bd61bbc3e7160b1e571c180d2b 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 9.8E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS05860 7681d2bd61bbc3e7160b1e571c180d2b 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 9.6E-15 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS05860 7681d2bd61bbc3e7160b1e571c180d2b 208 Gene3D G3DSA:1.10.357.10 4 190 7.2E-30 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 WS_RS05860 7681d2bd61bbc3e7160b1e571c180d2b 208 Pfam PF13972 Bacterial transcriptional repressor 87 193 2.8E-18 T 11-11-2016 IPR025722 Bacterial transcriptional repressor TetR WS_RS06070 f74cacaacd8322b7e598ec4e4bf21fd2 182 Pfam PF02659 Putative manganese efflux pump 32 178 3.9E-44 T 11-11-2016 IPR003810 Putative manganese efflux pump WS_RS06070 f74cacaacd8322b7e598ec4e4bf21fd2 182 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 181 23.214 T 11-11-2016 IPR022929 Putative manganese efflux pump MntP WS_RS03175 fc5c5a2b89e2290fceced583b2e00ced 205 SMART SM00382 28 205 4.2E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS03175 fc5c5a2b89e2290fceced583b2e00ced 205 Pfam PF00005 ABC transporter 20 154 4.3E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS03175 fc5c5a2b89e2290fceced583b2e00ced 205 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS03175 fc5c5a2b89e2290fceced583b2e00ced 205 SUPERFAMILY SSF52540 3 201 1.0E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03175 fc5c5a2b89e2290fceced583b2e00ced 205 Gene3D G3DSA:3.40.50.300 2 200 4.7E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06305 968e132fcedf0ede367fbe058dc00240 450 Pfam PF00877 NlpC/P60 family 300 383 2.4E-11 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain WS_RS06305 968e132fcedf0ede367fbe058dc00240 450 Pfam PF12912 NLPC_P60 stabilising domain, N term 20 121 1.5E-16 T 11-11-2016 IPR025606 NLPC/P60, N-terminal domain WS_RS06305 968e132fcedf0ede367fbe058dc00240 450 Gene3D G3DSA:3.90.1720.10 283 383 2.6E-15 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain WS_RS06305 968e132fcedf0ede367fbe058dc00240 450 PIRSF PIRSF019015 4 446 2.7E-152 T 11-11-2016 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type WS_RS06305 968e132fcedf0ede367fbe058dc00240 450 Pfam PF12914 SH3 domain of SH3b2 type 216 248 2.1E-7 T 11-11-2016 IPR026864 SH3b2-type SH3 domain WS_RS06305 968e132fcedf0ede367fbe058dc00240 450 Pfam PF12913 SH3 domain (SH3b1 type) 144 196 1.8E-25 T 11-11-2016 WS_RS06305 968e132fcedf0ede367fbe058dc00240 450 SUPERFAMILY SSF54001 279 383 5.23E-14 T 11-11-2016 WS_RS05595 3672568cb6ce27f320f0fc62d42464f0 108 Pfam PF01638 HxlR-like helix-turn-helix 22 107 8.3E-29 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type WS_RS05595 3672568cb6ce27f320f0fc62d42464f0 108 Gene3D G3DSA:1.10.10.10 10 107 1.2E-37 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05595 3672568cb6ce27f320f0fc62d42464f0 108 SUPERFAMILY SSF46785 12 107 9.27E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08860 5536c7e6f81e65da943177877de0527c 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 98.673 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 WS_RS08860 5536c7e6f81e65da943177877de0527c 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS08860 5536c7e6f81e65da943177877de0527c 431 Pfam PF00202 Aminotransferase class-III 36 396 3.6E-73 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS08860 5536c7e6f81e65da943177877de0527c 431 SUPERFAMILY SSF53383 4 427 7.54E-126 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS08860 5536c7e6f81e65da943177877de0527c 431 Gene3D G3DSA:3.40.640.10 73 317 8.5E-79 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS08860 5536c7e6f81e65da943177877de0527c 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 1.2E-187 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 WS_RS08860 5536c7e6f81e65da943177877de0527c 431 Gene3D G3DSA:3.90.1150.10 10 71 8.7E-41 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS08860 5536c7e6f81e65da943177877de0527c 431 Gene3D G3DSA:3.90.1150.10 322 427 8.7E-41 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS08895 fa31d514189c3cbcd547c2d4483ecf8f 366 PIRSF PIRSF000443 2 366 1.4E-138 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 WS_RS08895 fa31d514189c3cbcd547c2d4483ecf8f 366 Gene3D G3DSA:3.40.50.1820 24 365 2.2E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS08895 fa31d514189c3cbcd547c2d4483ecf8f 366 SUPERFAMILY SSF53474 7 365 1.82E-88 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS08895 fa31d514189c3cbcd547c2d4483ecf8f 366 Pfam PF00561 alpha/beta hydrolase fold 41 353 9.1E-22 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 WS_RS08895 fa31d514189c3cbcd547c2d4483ecf8f 366 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 12 365 3.8E-113 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SUPERFAMILY SSF52172 123 258 3.56E-33 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Gene3D G3DSA:3.40.50.2300 2 112 1.6E-17 T 11-11-2016 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Gene3D G3DSA:3.30.565.10 617 774 5.1E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SMART SM00448 125 238 4.9E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SMART SM00448 4 112 4.2E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SUPERFAMILY SSF55785 273 383 1.31E-13 T 11-11-2016 IPR000014 PAS domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 658 773 3.9E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SMART SM00086 339 381 0.012 T 11-11-2016 IPR001610 PAC motif WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SMART SM00086 483 523 200.0 T 11-11-2016 IPR001610 PAC motif WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Pfam PF00072 Response regulator receiver domain 127 236 3.7E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Pfam PF00072 Response regulator receiver domain 7 112 7.6E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Gene3D G3DSA:3.30.450.20 388 521 1.4E-14 T 11-11-2016 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SMART SM00091 411 478 2.7E-7 T 11-11-2016 IPR000014 PAS domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SMART SM00091 263 331 8.0 T 11-11-2016 IPR000014 PAS domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 773 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 730 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 751 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 716 2.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Gene3D G3DSA:3.40.50.2300 120 249 2.3E-32 T 11-11-2016 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SUPERFAMILY SSF55785 414 523 1.31E-13 T 11-11-2016 IPR000014 PAS domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SUPERFAMILY SSF47384 540 612 1.67E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Gene3D G3DSA:3.30.450.20 250 387 2.7E-20 T 11-11-2016 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SUPERFAMILY SSF55874 617 774 2.36E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SUPERFAMILY SSF52172 1 120 8.82E-19 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 410 528 3.4E-10 T 11-11-2016 IPR000014 PAS domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 280 388 2.2E-10 T 11-11-2016 IPR000014 PAS domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 SMART SM00387 657 776 3.4E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Pfam PF08447 PAS fold 286 374 1.3E-10 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS10530 27fc2e5375265d87c6f040ea06e08f06 789 Pfam PF13188 PAS domain 412 452 1.6E-10 T 11-11-2016 IPR000014 PAS domain WS_RS01335 25a3812286dfef8674c0388a08a994a6 475 Pfam PF06226 Protein of unknown function (DUF1007) 37 160 3.6E-7 T 11-11-2016 IPR010412 Protein of unknown function DUF1007 WS_RS01335 25a3812286dfef8674c0388a08a994a6 475 Pfam PF03824 High-affinity nickel-transport protein 249 349 9.7E-10 T 11-11-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 WS_RS05250 39154d960ff37d46a6f34bdae23cf12d 303 Gene3D G3DSA:3.30.450.90 9 106 9.4E-14 T 11-11-2016 WS_RS05250 39154d960ff37d46a6f34bdae23cf12d 303 Gene3D G3DSA:3.40.50.300 130 290 9.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05250 39154d960ff37d46a6f34bdae23cf12d 303 SUPERFAMILY SSF52540 8 285 1.7E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05250 39154d960ff37d46a6f34bdae23cf12d 303 SMART SM00382 136 287 0.0044 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS05250 39154d960ff37d46a6f34bdae23cf12d 303 Pfam PF00437 Type II/IV secretion system protein 11 286 6.6E-55 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 WS_RS00330 eac111449b24d511c871a29a51b20360 326 SUPERFAMILY SSF55729 10 153 1.27E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00330 eac111449b24d511c871a29a51b20360 326 Gene3D G3DSA:3.40.630.30 12 148 7.5E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00330 eac111449b24d511c871a29a51b20360 326 PIRSF PIRSF018688 5 326 2.2E-108 T 11-11-2016 IPR016732 Uncharacterised conserved protein UCP018688 WS_RS00330 eac111449b24d511c871a29a51b20360 326 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 33 324 6.2E-26 T 11-11-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal WS_RS00330 eac111449b24d511c871a29a51b20360 326 SUPERFAMILY SSF55729 154 326 1.06E-39 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00330 eac111449b24d511c871a29a51b20360 326 Gene3D G3DSA:3.40.630.30 149 318 4.1E-47 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 SUPERFAMILY SSF81891 415 472 1.96E-10 T 11-11-2016 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 SUPERFAMILY SSF81891 504 625 1.96E-10 T 11-11-2016 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 SUPERFAMILY SSF81301 61 191 1.73E-20 T 11-11-2016 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 Pfam PF08335 GlnD PII-uridylyltransferase 201 334 2.4E-23 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 SUPERFAMILY SSF55021 791 856 1.02E-6 T 11-11-2016 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 Gene3D G3DSA:1.10.3210.10 453 622 9.3E-8 T 11-11-2016 IPR006674 HD domain WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 Pfam PF03445 Putative nucleotidyltransferase DUF294 62 122 2.9E-5 T 11-11-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 Gene3D G3DSA:3.30.460.10 112 181 7.7E-6 T 11-11-2016 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 Gene3D G3DSA:3.30.460.10 57 111 2.1E-5 T 11-11-2016 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 Pfam PF01966 HD domain 474 599 5.4E-7 T 11-11-2016 IPR006674 HD domain WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 862 86.178 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 SUPERFAMILY SSF81593 212 315 3.3E-9 T 11-11-2016 WS_RS00105 e7c63b081d88e07e9e1d9455027eeae2 862 PIRSF PIRSF006288 21 857 2.8E-133 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 WS_RS03350 a433e931759d61be7f7803cc87f4d009 137 Gene3D G3DSA:1.10.10.10 4 94 3.1E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03350 a433e931759d61be7f7803cc87f4d009 137 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 123 2.3E-27 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type WS_RS03350 a433e931759d61be7f7803cc87f4d009 137 SUPERFAMILY SSF46785 4 123 1.36E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03350 a433e931759d61be7f7803cc87f4d009 137 Pfam PF02082 Transcriptional regulator 4 84 2.8E-25 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type WS_RS09090 392885d67ca4707346fb5311aec32e82 903 SMART SM00869 631 893 5.9E-31 T 11-11-2016 IPR005546 Autotransporter beta-domain WS_RS09090 392885d67ca4707346fb5311aec32e82 903 Pfam PF03797 Autotransporter beta-domain 630 883 2.7E-36 T 11-11-2016 IPR005546 Autotransporter beta-domain WS_RS09090 392885d67ca4707346fb5311aec32e82 903 Gene3D G3DSA:2.40.128.130 626 903 2.2E-36 T 11-11-2016 IPR005546 Autotransporter beta-domain WS_RS09090 392885d67ca4707346fb5311aec32e82 903 SUPERFAMILY SSF103515 627 903 1.57E-36 T 11-11-2016 IPR005546 Autotransporter beta-domain WS_RS09090 392885d67ca4707346fb5311aec32e82 903 SUPERFAMILY SSF51126 28 471 1.1E-14 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 SUPERFAMILY SSF50249 66 127 2.91E-20 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 SUPERFAMILY SSF50104 2 64 1.0E-21 T 11-11-2016 IPR008991 Translation protein SH3-like domain WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 Gene3D G3DSA:2.30.30.30 3 63 4.3E-29 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 2.6E-75 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 SMART SM00841 130 185 5.2E-29 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 Hamap MF_00141 Elongation factor P [efp]. 2 186 48.192 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 Gene3D G3DSA:2.40.50.140 66 128 1.0E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.7E-21 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 SUPERFAMILY SSF50249 130 186 7.02E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 SMART SM01185 68 122 2.7E-29 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 PIRSF PIRSF005901 1 187 4.9E-66 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 3.8E-25 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 Gene3D G3DSA:2.40.50.140 130 186 2.1E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06125 c425f0e76e96d7e34ec7b896c93500ce 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 1.2E-23 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 SUPERFAMILY SSF54211 3 80 7.84E-28 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 Gene3D G3DSA:3.30.230.40 88 190 5.3E-28 T 11-11-2016 WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 171 2.6E-57 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 SUPERFAMILY SSF54211 85 175 1.77E-28 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 Gene3D G3DSA:3.30.230.40 3 87 1.1E-32 T 11-11-2016 WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 153 165 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 190 35.077 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 WS_RS09760 d5490786a4185e4b52fed52333a04d2b 190 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 75 14.94 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 Pfam PF00467 KOW motif 8 38 2.6E-6 T 11-11-2016 IPR005824 KOW WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 74 1.2E-10 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 SMART SM00739 5 32 2.8E-5 T 11-11-2016 IPR005824 KOW WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 75 1.3E-25 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 Gene3D G3DSA:2.30.30.30 3 75 3.1E-19 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 SUPERFAMILY SSF50104 2 74 8.28E-24 T 11-11-2016 IPR008991 Translation protein SH3-like domain WS_RS08030 07a43296f22edc1f65b3a6c2a5786f98 76 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 11-11-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 29 7.2E-7 T 11-11-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 6 152 1.2E-42 T 11-11-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 27 8.5E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 Gene3D G3DSA:2.102.10.10 10 156 5.4E-36 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 7.5E-6 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 7.5E-6 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 7.5E-6 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 Pfam PF00355 Rieske [2Fe-2S] domain 52 142 6.5E-12 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 WS_RS10145 f6d4b105ed7f84168a0f238476415097 167 SUPERFAMILY SSF50022 28 159 3.58E-27 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 Pfam PF07503 HypF finger 162 195 6.4E-18 T 11-11-2016 IPR011125 Zinc finger, HypF-type GO:0008270 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 Pfam PF07503 HypF finger 112 145 2.9E-18 T 11-11-2016 IPR011125 Zinc finger, HypF-type GO:0008270 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 SUPERFAMILY SSF54975 7 94 1.11E-23 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 Pfam PF00708 Acylphosphatase 6 94 1.0E-24 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 SUPERFAMILY SSF55821 179 400 4.27E-47 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 PIRSF PIRSF006256 4 758 5.0E-284 T 11-11-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 11-11-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 Pfam PF01300 Telomere recombination 215 395 6.4E-55 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 Gene3D G3DSA:3.90.870.10 204 389 2.4E-45 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 751 4.3E-247 T 11-11-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 WS_RS03790 db29fae8c727b031d12bc99956ce8c68 759 Gene3D G3DSA:3.30.70.100 6 94 8.2E-26 T 11-11-2016 WS_RS09920 bec63566b8b615daf2712fc779fe5547 119 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 52 105 2.0E-26 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA WS_RS09920 bec63566b8b615daf2712fc779fe5547 119 Pfam PF11756 Nitrous oxide-stimulated promoter 6 108 7.1E-15 T 11-11-2016 IPR020483 Uncharacterised protein family YgbA WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 Gene3D G3DSA:2.40.30.10 192 287 2.8E-13 T 11-11-2016 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 407 2.7E-134 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 Gene3D G3DSA:3.50.50.60 354 410 5.0E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 Gene3D G3DSA:3.50.50.60 5 190 5.0E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 SUPERFAMILY SSF51905 5 192 1.1E-42 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 SUPERFAMILY SSF51905 352 410 1.1E-42 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 SUPERFAMILY SSF160996 193 355 1.09E-32 T 11-11-2016 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 Pfam PF03486 HI0933-like protein 7 407 7.5E-103 T 11-11-2016 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.0E-5 T 11-11-2016 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.0E-5 T 11-11-2016 WS_RS07760 a8c06dffbb1c8431224ff674af4ead18 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 384 3.0E-5 T 11-11-2016 WS_RS08085 9437e630b2969652fa961845d903e3c1 192 Pfam PF00297 Ribosomal protein L3 94 161 1.4E-11 T 11-11-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08085 9437e630b2969652fa961845d903e3c1 192 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 189 1.2E-50 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08085 9437e630b2969652fa961845d903e3c1 192 Gene3D G3DSA:4.10.960.10 88 151 3.1E-21 T 11-11-2016 WS_RS08085 9437e630b2969652fa961845d903e3c1 192 SUPERFAMILY SSF50447 2 189 1.06E-46 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS07610 0fa77eaf827c14e34cb15ad393ed6f06 332 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 3 317 23.488 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 WS_RS07610 0fa77eaf827c14e34cb15ad393ed6f06 332 Pfam PF01867 CRISPR associated protein Cas1 5 268 4.3E-64 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 WS_RS07610 0fa77eaf827c14e34cb15ad393ed6f06 332 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 5 326 6.7E-65 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 SMART SM00448 11 121 1.1E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 Gene3D G3DSA:3.30.70.270 276 429 1.0E-49 T 11-11-2016 WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 SUPERFAMILY SSF55785 153 254 1.24E-21 T 11-11-2016 IPR000014 PAS domain WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 261 1.1E-15 T 11-11-2016 IPR000014 PAS domain WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 SUPERFAMILY SSF52172 9 142 2.56E-36 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 SUPERFAMILY SSF55073 279 429 1.41E-44 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 427 2.9E-42 T 11-11-2016 IPR000160 GGDEF domain WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 Gene3D G3DSA:3.30.450.20 153 255 5.5E-22 T 11-11-2016 WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 SMART SM00091 142 208 0.007 T 11-11-2016 IPR000014 PAS domain WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 270 428 1.6E-46 T 11-11-2016 IPR000160 GGDEF domain WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 Gene3D G3DSA:3.40.50.2300 9 136 1.8E-34 T 11-11-2016 WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 Pfam PF00072 Response regulator receiver domain 13 121 4.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 SMART SM00086 214 256 0.0032 T 11-11-2016 IPR001610 PAC motif WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 SMART SM00267 263 431 9.3E-60 T 11-11-2016 IPR000160 GGDEF domain WS_RS02040 b9ef5b4753237c583907b10482e4842f 431 Pfam PF13426 PAS domain 153 255 1.9E-15 T 11-11-2016 IPR000014 PAS domain WS_RS09945 caada688b8ec7995b35483aa4bbf1035 179 Pfam PF13420 Acetyltransferase (GNAT) domain 27 166 1.3E-12 T 11-11-2016 WS_RS09945 caada688b8ec7995b35483aa4bbf1035 179 Gene3D G3DSA:3.40.630.30 21 166 1.7E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS09945 caada688b8ec7995b35483aa4bbf1035 179 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 18 172 2.1E-63 T 11-11-2016 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase WS_RS09945 caada688b8ec7995b35483aa4bbf1035 179 SUPERFAMILY SSF55729 26 175 1.17E-31 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS02430 52b59432315d05e23d23756b6cf8a6c9 569 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 123 137 - T 11-11-2016 IPR019775 WD40 repeat, conserved site WS_RS02430 52b59432315d05e23d23756b6cf8a6c9 569 SUPERFAMILY SSF50978 89 308 2.62E-21 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 WS_RS02430 52b59432315d05e23d23756b6cf8a6c9 569 Gene3D G3DSA:2.130.10.10 43 304 1.7E-19 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS02430 52b59432315d05e23d23756b6cf8a6c9 569 SMART SM00320 97 136 5.9E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS02430 52b59432315d05e23d23756b6cf8a6c9 569 SMART SM00320 139 178 1.5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 SUPERFAMILY SSF50465 307 399 5.52E-37 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 398 2.7E-231 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 6.2E-34 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 1.0E-57 T 11-11-2016 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 Gene3D G3DSA:2.40.30.10 305 398 2.8E-47 T 11-11-2016 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 Gene3D G3DSA:2.40.30.10 217 302 6.7E-39 T 11-11-2016 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 5.7E-13 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 60.502 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.1E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.1E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.1E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 Pfam PF03144 Elongation factor Tu domain 2 230 299 8.7E-20 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 SUPERFAMILY SSF50447 210 306 8.05E-33 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 SUPERFAMILY SSF52540 8 231 2.49E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02270 bb11172f63754c12ed5d1917f05998fd 399 Gene3D G3DSA:3.40.50.300 4 216 7.0E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02305 6d4d32886418db220b64dacd654dd8b8 160 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 157 22.707 T 11-11-2016 IPR022973 Ribosomal protein L10 WS_RS02305 6d4d32886418db220b64dacd654dd8b8 160 Pfam PF00466 Ribosomal protein L10 1 95 2.3E-22 T 11-11-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 WS_RS02305 6d4d32886418db220b64dacd654dd8b8 160 SUPERFAMILY SSF160369 1 155 1.44E-42 T 11-11-2016 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 Hamap MF_00258 Glutamate racemase [murI]. 1 248 30.982 T 11-11-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 177 187 - T 11-11-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 SUPERFAMILY SSF53681 109 246 8.83E-29 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 11-11-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 SUPERFAMILY SSF53681 1 99 1.24E-32 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 211 1.1E-31 T 11-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 246 6.7E-67 T 11-11-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 Gene3D G3DSA:3.40.50.1860 121 197 1.1E-21 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03885 85a67c482632ddd3352effafaf87453a 248 Gene3D G3DSA:3.40.50.1860 2 120 4.4E-42 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Pfam PF01568 Molydopterin dinucleotide binding domain 638 747 7.3E-24 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Gene3D G3DSA:3.40.228.10 179 353 2.4E-47 T 11-11-2016 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Pfam PF00384 Molybdopterin oxidoreductase 97 533 5.0E-109 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 19 1.6E-6 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Gene3D G3DSA:2.20.25.90 39 97 1.7E-16 T 11-11-2016 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 SUPERFAMILY SSF50692 630 750 2.71E-28 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Gene3D G3DSA:2.40.40.20 627 759 4.6E-32 T 11-11-2016 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 63 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 SMART SM00926 40 94 1.5E-11 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 19 6.1E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 474 491 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 SUPERFAMILY SSF53706 41 576 3.01E-139 T 11-11-2016 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Gene3D G3DSA:3.40.50.740 354 549 5.7E-54 T 11-11-2016 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Gene3D G3DSA:3.40.50.740 98 173 5.7E-54 T 11-11-2016 WS_RS00545 5de469f43ded3f5b6de93073af2eef9c 759 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 1.8E-13 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08585 b86926d1d9b0157f2d67a843ba7889d8 262 PIRSF PIRSF000388 1 262 2.1E-106 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 WS_RS08585 b86926d1d9b0157f2d67a843ba7889d8 262 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 1.1E-106 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 WS_RS08585 b86926d1d9b0157f2d67a843ba7889d8 262 SUPERFAMILY SSF51621 4 262 4.71E-98 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 WS_RS08585 b86926d1d9b0157f2d67a843ba7889d8 262 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 1.2E-109 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 WS_RS08585 b86926d1d9b0157f2d67a843ba7889d8 262 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 40.772 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 WS_RS08585 b86926d1d9b0157f2d67a843ba7889d8 262 Gene3D G3DSA:3.20.20.60 1 262 3.0E-109 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 WS_RS03660 2477d7912a8eb662467055bb12cd2f70 515 SUPERFAMILY SSF58104 206 514 1.96E-56 T 11-11-2016 WS_RS03660 2477d7912a8eb662467055bb12cd2f70 515 SMART SM00304 184 238 4.1E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS03660 2477d7912a8eb662467055bb12cd2f70 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 513 1.3E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS03660 2477d7912a8eb662467055bb12cd2f70 515 SMART SM00283 239 514 6.9E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS03660 2477d7912a8eb662467055bb12cd2f70 515 Gene3D G3DSA:1.10.287.950 270 484 2.1E-44 T 11-11-2016 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 TIGRFAM TIGR01752 flav_long: flavodoxin 3 169 6.7E-61 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 PIRSF PIRSF038996 1 171 2.2E-68 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 Gene3D G3DSA:3.40.50.360 1 169 2.3E-54 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS03740 9758006545fd22568ffed1fde935da8b 171 Pfam PF00258 Flavodoxin 6 161 1.7E-26 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 PRINTS PR00369 Flavodoxin signature 53 64 7.6E-7 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 PRINTS PR00369 Flavodoxin signature 5 18 7.6E-7 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 PRINTS PR00369 Flavodoxin signature 82 92 7.6E-7 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 WS_RS03740 9758006545fd22568ffed1fde935da8b 171 SUPERFAMILY SSF52218 3 169 1.34E-44 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS00920 a0203f7954f16d50ef8adca38b849ce1 74 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 5 54 2.1E-16 T 11-11-2016 IPR008621 Cbb3-type cytochrome oxidase component WS_RS00920 a0203f7954f16d50ef8adca38b849ce1 74 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 11 66 6.3E-34 T 11-11-2016 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ WS_RS09380 8c59350e9c326041f4ce139e2d723f8c 198 Gene3D G3DSA:3.40.30.10 3 159 8.8E-58 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS09380 8c59350e9c326041f4ce139e2d723f8c 198 SUPERFAMILY SSF52833 2 195 3.06E-62 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS09380 8c59350e9c326041f4ce139e2d723f8c 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 192 8.9E-10 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS09380 8c59350e9c326041f4ce139e2d723f8c 198 Pfam PF00578 AhpC/TSA family 4 137 1.2E-31 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS09380 8c59350e9c326041f4ce139e2d723f8c 198 Gene3D G3DSA:3.30.1020.10 160 195 4.5E-12 T 11-11-2016 WS_RS09380 8c59350e9c326041f4ce139e2d723f8c 198 PIRSF PIRSF000239 1 197 1.3E-57 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 SUPERFAMILY SSF55785 20 119 1.92E-32 T 11-11-2016 IPR000014 PAS domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 SUPERFAMILY SSF141868 299 529 9.15E-60 T 11-11-2016 IPR001633 EAL domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 SMART SM00091 7 76 1.7E-6 T 11-11-2016 IPR000014 PAS domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 128 1.9E-20 T 11-11-2016 IPR000014 PAS domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 Gene3D G3DSA:3.20.20.450 296 530 1.0E-62 T 11-11-2016 IPR001633 EAL domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 SUPERFAMILY SSF55073 138 274 1.18E-22 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 275 1.0E-19 T 11-11-2016 IPR000160 GGDEF domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 Pfam PF00563 EAL domain 301 528 1.8E-58 T 11-11-2016 IPR001633 EAL domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 Pfam PF13426 PAS domain 21 121 2.6E-17 T 11-11-2016 IPR000014 PAS domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 Gene3D G3DSA:3.30.70.270 136 283 4.0E-23 T 11-11-2016 WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 273 2.7E-13 T 11-11-2016 IPR000160 GGDEF domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 Gene3D G3DSA:3.30.450.20 21 121 2.4E-31 T 11-11-2016 WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 SMART SM00052 293 533 4.9E-46 T 11-11-2016 IPR001633 EAL domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 SMART SM00267 123 282 5.8E-17 T 11-11-2016 IPR000160 GGDEF domain WS_RS07360 df59c8bac12a2c6e0c5a8076b90d2127 541 SMART SM00086 81 123 1.1E-4 T 11-11-2016 IPR001610 PAC motif WS_RS02595 78d44d178f98a75815bf3e1de352aaa2 229 Pfam PF01048 Phosphorylase superfamily 2 219 2.1E-47 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 WS_RS02595 78d44d178f98a75815bf3e1de352aaa2 229 SUPERFAMILY SSF53167 1 228 4.45E-67 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 WS_RS02595 78d44d178f98a75815bf3e1de352aaa2 229 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 2.2E-53 T 11-11-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS02595 78d44d178f98a75815bf3e1de352aaa2 229 Gene3D G3DSA:3.40.50.1580 1 228 2.4E-70 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 638 800 3.8E-48 T 11-11-2016 IPR000160 GGDEF domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SUPERFAMILY SSF55785 538 635 2.97E-8 T 11-11-2016 IPR000014 PAS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF00571 CBS domain 142 186 8.2E-6 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF00571 CBS domain 80 121 0.0028 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF00571 CBS domain 14 57 1.7E-5 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF00571 CBS domain 201 251 2.4E-7 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF13188 PAS domain 269 322 0.18 T 11-11-2016 IPR000014 PAS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Gene3D G3DSA:3.10.580.10 14 118 5.7E-16 T 11-11-2016 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF13426 PAS domain 397 497 0.22 T 11-11-2016 IPR000014 PAS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Gene3D G3DSA:3.30.450.20 374 496 1.2E-5 T 11-11-2016 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SUPERFAMILY SSF54631 132 252 1.39E-19 T 11-11-2016 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SMART SM00116 74 122 3.3 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SMART SM00116 205 254 4.7E-7 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SMART SM00116 10 58 19.0 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SMART SM00116 141 189 0.027 T 11-11-2016 IPR000644 CBS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Gene3D G3DSA:3.30.70.270 644 802 1.9E-50 T 11-11-2016 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Gene3D G3DSA:3.10.580.10 129 258 2.0E-20 T 11-11-2016 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF00990 Diguanylate cyclase, GGDEF domain 642 796 1.5E-44 T 11-11-2016 IPR000160 GGDEF domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SUPERFAMILY SSF54631 2 127 1.26E-18 T 11-11-2016 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SUPERFAMILY SSF55073 647 801 7.45E-46 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Gene3D G3DSA:3.30.450.20 513 643 2.4E-11 T 11-11-2016 WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SMART SM00267 631 800 4.6E-56 T 11-11-2016 IPR000160 GGDEF domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 SUPERFAMILY SSF55785 363 415 6.8E-5 T 11-11-2016 IPR000014 PAS domain WS_RS10615 6538fd70e9199c57caa1a5448cd155fc 803 Pfam PF08447 PAS fold 546 618 1.8E-7 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS05915 cf267577d6f6ad90a2ca9bc4f85ae656 250 Gene3D G3DSA:3.40.470.10 76 248 5.0E-29 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS05915 cf267577d6f6ad90a2ca9bc4f85ae656 250 Pfam PF03167 Uracil DNA glycosylase superfamily 98 243 3.4E-19 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS05915 cf267577d6f6ad90a2ca9bc4f85ae656 250 SMART SM00986 97 244 3.3E-6 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS05915 cf267577d6f6ad90a2ca9bc4f85ae656 250 SMART SM00987 97 244 3.3E-6 T 11-11-2016 WS_RS05915 cf267577d6f6ad90a2ca9bc4f85ae656 250 SUPERFAMILY SSF52141 70 249 1.11E-29 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS06185 284a6f7bbfdc8b2eecfdc46ca3217a9f 322 SUPERFAMILY SSF141523 89 186 1.01E-5 T 11-11-2016 WS_RS06185 284a6f7bbfdc8b2eecfdc46ca3217a9f 322 SUPERFAMILY SSF54427 216 321 9.35E-8 T 11-11-2016 IPR032710 NTF2-like domain WS_RS06185 284a6f7bbfdc8b2eecfdc46ca3217a9f 322 Pfam PF03734 L,D-transpeptidase catalytic domain 78 183 3.2E-8 T 11-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 Gene3D G3DSA:2.20.25.90 55 114 7.6E-18 T 11-11-2016 WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 Pfam PF00384 Molybdopterin oxidoreductase 113 183 4.5E-15 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 35 2.9E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 SUPERFAMILY SSF53706 54 187 5.63E-51 T 11-11-2016 WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 SMART SM00926 56 110 7.7E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 57 108 4.7E-13 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03530 864338a0b7e474d1ca5621f535b38f05 187 Gene3D G3DSA:3.40.50.740 115 184 7.6E-25 T 11-11-2016 WS_RS04860 3fbca27f313c091ea766b5a60a7f8cdf 227 Gene3D G3DSA:3.40.50.620 6 189 1.2E-47 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS04860 3fbca27f313c091ea766b5a60a7f8cdf 227 PIRSF PIRSF000857 2 224 7.6E-70 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 WS_RS04860 3fbca27f313c091ea766b5a60a7f8cdf 227 SUPERFAMILY SSF52402 9 182 6.7E-40 T 11-11-2016 WS_RS04860 3fbca27f313c091ea766b5a60a7f8cdf 227 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 20 194 3.6E-40 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 WS_RS00055 99880c6250adf80ed93fd1ed7573b7f7 319 Pfam PF14827 Double sensory domain of two-component sensor kinase 38 276 7.1E-15 T 11-11-2016 IPR029150 Double Cache domain 3 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 Pfam PF00453 Ribosomal protein L20 3 109 4.2E-46 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.62 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.1E-38 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.1E-38 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.1E-38 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 Gene3D G3DSA:1.10.1900.20 55 117 2.1E-31 T 11-11-2016 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 SUPERFAMILY SSF74731 2 117 7.46E-48 T 11-11-2016 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 2.0E-15 T 11-11-2016 WS_RS03960 5480d7b4169f0bb8655fc38153d84080 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 7.5E-51 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS05150 384405a558e4cc762b6dfc80825b06a2 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 6.8E-51 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 WS_RS05150 384405a558e4cc762b6dfc80825b06a2 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 5.8E-18 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 WS_RS05150 384405a558e4cc762b6dfc80825b06a2 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 5.8E-18 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 WS_RS05150 384405a558e4cc762b6dfc80825b06a2 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 5.8E-18 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 WS_RS05150 384405a558e4cc762b6dfc80825b06a2 153 SUPERFAMILY SSF51230 77 151 6.54E-21 T 11-11-2016 IPR011053 Single hybrid motif WS_RS05150 384405a558e4cc762b6dfc80825b06a2 153 Gene3D G3DSA:2.40.50.100 73 151 1.7E-25 T 11-11-2016 WS_RS05150 384405a558e4cc762b6dfc80825b06a2 153 Pfam PF00364 Biotin-requiring enzyme 77 149 1.4E-16 T 11-11-2016 IPR000089 Biotin/lipoyl attachment WS_RS06760 6e3591c69dc6fd449b1f9575befbb287 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 15 348 4.1E-55 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 WS_RS06760 6e3591c69dc6fd449b1f9575befbb287 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 23 267 6.4E-22 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain WS_RS06760 6e3591c69dc6fd449b1f9575befbb287 364 SUPERFAMILY SSF111369 26 266 9.15E-27 T 11-11-2016 WS_RS06760 6e3591c69dc6fd449b1f9575befbb287 364 Gene3D G3DSA:2.40.50.100 36 69 1.5E-17 T 11-11-2016 WS_RS06760 6e3591c69dc6fd449b1f9575befbb287 364 Gene3D G3DSA:2.40.50.100 158 189 1.5E-17 T 11-11-2016 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 SMART SM01228 543 614 8.5E-30 T 11-11-2016 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 Pfam PF13932 GidA associated domain 399 612 6.1E-56 T 11-11-2016 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 618 2.0E-266 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 Pfam PF01134 Glucose inhibited division protein A 5 397 1.7E-162 T 11-11-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 SUPERFAMILY SSF51905 3 63 1.63E-45 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 SUPERFAMILY SSF51905 94 259 1.63E-45 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 621 39.725 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 WS_RS03915 8bb4d10a13dfe8ecd0bab204c836e0fd 625 Gene3D G3DSA:3.50.50.60 3 230 1.0E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Pfam PF03129 Anticodon binding domain 508 596 3.0E-19 T 11-11-2016 IPR004154 Anticodon-binding WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 36 600 32.634 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Gene3D G3DSA:3.30.980.10 36 99 2.3E-35 T 11-11-2016 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Gene3D G3DSA:3.30.980.10 154 190 2.3E-35 T 11-11-2016 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 SUPERFAMILY SSF55681 209 491 3.06E-91 T 11-11-2016 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Gene3D G3DSA:3.40.50.800 498 601 1.6E-27 T 11-11-2016 IPR004154 Anticodon-binding WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 42 597 2.0E-217 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 SUPERFAMILY SSF55186 33 207 4.71E-56 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 500 512 8.3E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 473 486 8.3E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 296 324 8.3E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 352 8.3E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 430 458 8.3E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 SMART SM00863 136 185 7.5E-20 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Gene3D G3DSA:3.30.54.20 103 153 2.8E-15 T 11-11-2016 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Gene3D G3DSA:3.30.930.10 208 495 2.9E-115 T 11-11-2016 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 SUPERFAMILY SSF52954 493 599 4.23E-26 T 11-11-2016 IPR004154 Anticodon-binding WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 290 494 3.1E-41 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS03945 812e74bf3b817539e1a01c345b6f00c2 603 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 137 185 2.8E-13 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Pfam PF04898 Glutamate synthase central domain 451 736 8.7E-90 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Gene3D G3DSA:3.60.20.10 11 431 1.4E-151 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Gene3D G3DSA:3.20.20.70 833 1189 1.0E-155 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Pfam PF01645 Conserved region in glutamate synthase 806 1158 2.5E-141 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Pfam PF00310 Glutamine amidotransferases class-II 11 421 5.0E-151 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Gene3D G3DSA:2.160.20.60 1215 1465 1.9E-90 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 SUPERFAMILY SSF51395 435 1183 1.14E-221 T 11-11-2016 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Gene3D G3DSA:3.20.20.70 432 777 1.0E-78 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 SUPERFAMILY SSF56235 11 425 5.98E-132 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 Pfam PF01493 GXGXG motif 1234 1416 1.2E-74 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 WS_RS05755 69da7ccf3e9ae4c826cf7c5f956593fb 1472 SUPERFAMILY SSF69336 1206 1464 1.96E-84 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 440 456 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 PRINTS PR00397 Sirohaem Fe-binding site signature 393 411 4.5E-6 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 PRINTS PR00397 Sirohaem Fe-binding site signature 440 458 4.5E-6 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 396 539 6.6E-9 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 120 268 3.1E-33 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Gene3D G3DSA:3.30.110.40 697 763 8.0E-20 T 11-11-2016 IPR001455 TusA-like domain WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Gene3D G3DSA:3.30.413.10 392 533 1.1E-23 T 11-11-2016 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Gene3D G3DSA:3.30.413.10 120 271 1.3E-30 T 11-11-2016 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Gene3D G3DSA:3.90.480.10 307 377 4.2E-27 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Gene3D G3DSA:3.90.480.10 48 117 4.2E-27 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 SUPERFAMILY SSF55124 14 117 4.58E-26 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 313 381 2.1E-10 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 44 110 1.3E-16 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 SUPERFAMILY SSF64307 697 763 3.92E-17 T 11-11-2016 IPR001455 TusA-like domain WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 SUPERFAMILY SSF56014 393 553 7.07E-25 T 11-11-2016 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 SUPERFAMILY SSF55124 251 404 1.24E-9 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 Pfam PF01206 Sulfurtransferase TusA 697 763 4.9E-17 T 11-11-2016 IPR001455 TusA-like domain WS_RS04830 beff69b4862ec39c3d7ff7f651447f16 764 SUPERFAMILY SSF56014 120 273 4.58E-37 T 11-11-2016 WS_RS05160 5f8a4bc38b56a15b0b0daebd78c5a978 253 SUPERFAMILY SSF64518 39 246 2.75E-30 T 11-11-2016 WS_RS05160 5f8a4bc38b56a15b0b0daebd78c5a978 253 Gene3D G3DSA:1.20.1330.10 53 208 1.4E-23 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS05160 5f8a4bc38b56a15b0b0daebd78c5a978 253 Pfam PF00700 Bacterial flagellin C-terminal helical region 167 238 9.5E-7 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS05160 5f8a4bc38b56a15b0b0daebd78c5a978 253 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 136 5.0E-16 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS02575 ebde3249e7358c0975724f6e57aa833b 354 SUPERFAMILY SSF48452 238 350 3.94E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02575 ebde3249e7358c0975724f6e57aa833b 354 Pfam PF13432 Tetratricopeptide repeat 242 303 7.7E-11 T 11-11-2016 WS_RS02575 ebde3249e7358c0975724f6e57aa833b 354 Gene3D G3DSA:1.25.40.10 231 345 3.8E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 Gene3D G3DSA:3.40.50.720 3 235 1.4E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 SUPERFAMILY SSF51735 2 226 2.63E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 Pfam PF00106 short chain dehydrogenase 4 187 1.8E-48 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.4E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.4E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.4E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.4E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.4E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10030 2aad4c42a6d49cae8d05fafde970194d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS09665 020828715daed639edf0d5d60f773eca 183 Pfam PF04368 Protein of unknown function (DUF507) 1 182 2.1E-69 T 11-11-2016 IPR007463 Protein of unknown function DUF507 WS_RS00380 eb895492d5c65b083afbdf77608ddfb6 201 Pfam PF14358 Domain of unknown function (DUF4405) 5 71 7.7E-14 T 11-11-2016 IPR025517 Domain of unknown function DUF4405 WS_RS00380 eb895492d5c65b083afbdf77608ddfb6 201 Gene3D G3DSA:1.20.950.20 9 75 7.4E-4 T 11-11-2016 WS_RS09735 af8bfc6a8cb067fc1984ab1b52a52336 152 SUPERFAMILY SSF55729 2 150 2.87E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS09735 af8bfc6a8cb067fc1984ab1b52a52336 152 Gene3D G3DSA:3.40.630.30 2 138 7.2E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS09735 af8bfc6a8cb067fc1984ab1b52a52336 152 Pfam PF13508 Acetyltransferase (GNAT) domain 45 119 9.0E-11 T 11-11-2016 IPR000182 GNAT domain GO:0008080 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SUPERFAMILY SSF47384 527 598 1.22E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 PRINTS PR00344 Bacterial sensor protein C-terminal signature 744 757 6.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 718 6.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 704 6.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 738 6.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 Gene3D G3DSA:3.30.565.10 607 758 2.9E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 Gene3D G3DSA:3.30.450.20 369 509 3.4E-13 T 11-11-2016 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 Gene3D G3DSA:1.10.287.130 529 597 3.4E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SMART SM00387 645 760 9.3E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 Pfam PF13188 PAS domain 395 443 4.6E-6 T 11-11-2016 IPR000014 PAS domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SUPERFAMILY SSF55874 605 758 5.37E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 647 758 1.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SUPERFAMILY SSF55785 249 359 2.09E-15 T 11-11-2016 IPR000014 PAS domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SMART SM00091 244 310 7.0E-4 T 11-11-2016 IPR000014 PAS domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SMART SM00091 395 466 0.085 T 11-11-2016 IPR000014 PAS domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 392 517 4.3E-10 T 11-11-2016 IPR000014 PAS domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 365 3.3E-12 T 11-11-2016 IPR000014 PAS domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SUPERFAMILY SSF55785 398 511 1.41E-10 T 11-11-2016 IPR000014 PAS domain WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 Gene3D G3DSA:3.30.450.20 246 368 1.0E-13 T 11-11-2016 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 SMART SM00388 533 603 2.5E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10745 097e448bbb586e52ce05b1fccd520f0d 765 Pfam PF13426 PAS domain 254 357 4.2E-9 T 11-11-2016 IPR000014 PAS domain WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 SUPERFAMILY SSF82714 182 265 4.97E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 SUPERFAMILY SSF82714 714 802 4.71E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.4E-41 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.4E-41 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.4E-41 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.4E-41 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.4E-41 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.4E-41 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.4E-41 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 SUPERFAMILY SSF82693 267 323 3.09E-5 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 SUPERFAMILY SSF82693 140 181 3.09E-5 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 SUPERFAMILY SSF82693 38 127 6.8E-19 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 Gene3D G3DSA:1.20.1640.10 284 495 7.3E-51 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 SUPERFAMILY SSF82866 297 491 6.67E-38 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 Gene3D G3DSA:3.30.2090.10 182 265 3.2E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 Gene3D G3DSA:3.30.2090.10 714 801 9.7E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 Gene3D G3DSA:3.30.70.1430 38 137 1.9E-22 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 SUPERFAMILY SSF82866 798 1032 5.23E-44 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 Gene3D G3DSA:1.10.3850.10 806 1032 1.1E-51 T 11-11-2016 WS_RS02030 50e5946ebb50a8b981fbbef7aabf712a 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 6.4E-194 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS02825 e62482daf620d8b17ef00e29ead01d8e 329 SUPERFAMILY SSF54862 35 325 6.91E-57 T 11-11-2016 WS_RS02825 e62482daf620d8b17ef00e29ead01d8e 329 Gene3D G3DSA:3.30.70.20 161 208 4.4E-8 T 11-11-2016 WS_RS02825 e62482daf620d8b17ef00e29ead01d8e 329 Pfam PF13247 4Fe-4S dicluster domain 117 223 1.3E-15 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS02825 e62482daf620d8b17ef00e29ead01d8e 329 Gene3D G3DSA:3.30.70.20 125 160 5.4E-14 T 11-11-2016 WS_RS02825 e62482daf620d8b17ef00e29ead01d8e 329 Gene3D G3DSA:3.30.70.20 209 245 1.4E-26 T 11-11-2016 WS_RS02825 e62482daf620d8b17ef00e29ead01d8e 329 Gene3D G3DSA:3.30.70.20 37 124 1.4E-26 T 11-11-2016 WS_RS03695 80641d952e59aaaeea56f7595ae853b5 345 Gene3D G3DSA:2.40.50.100 30 64 2.1E-20 T 11-11-2016 WS_RS03695 80641d952e59aaaeea56f7595ae853b5 345 Gene3D G3DSA:2.40.50.100 139 171 2.1E-20 T 11-11-2016 WS_RS03695 80641d952e59aaaeea56f7595ae853b5 345 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 6 341 1.0E-77 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 WS_RS03695 80641d952e59aaaeea56f7595ae853b5 345 SUPERFAMILY SSF111369 20 266 2.88E-64 T 11-11-2016 WS_RS03695 80641d952e59aaaeea56f7595ae853b5 345 Pfam PF13533 Biotin-lipoyl like 31 78 6.8E-9 T 11-11-2016 WS_RS03695 80641d952e59aaaeea56f7595ae853b5 345 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 108 261 7.1E-8 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain WS_RS05235 69f3c52ddaecef5f6d5439d8cd087590 104 SUPERFAMILY SSF50249 1 103 1.1E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS05235 69f3c52ddaecef5f6d5439d8cd087590 104 Pfam PF00436 Single-strand binding protein family 2 103 4.8E-15 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 WS_RS05235 69f3c52ddaecef5f6d5439d8cd087590 104 PIRSF PIRSF002070 1 103 1.9E-14 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 WS_RS05235 69f3c52ddaecef5f6d5439d8cd087590 104 Gene3D G3DSA:2.40.50.140 1 103 4.0E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08240 267014d91d5f4140e6a8b2d9f5615499 455 Gene3D G3DSA:3.80.30.20 48 275 3.3E-33 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS08240 267014d91d5f4140e6a8b2d9f5615499 455 Pfam PF06969 HemN C-terminal domain 360 426 5.5E-13 T 11-11-2016 IPR010723 HemN, C-terminal WS_RS08240 267014d91d5f4140e6a8b2d9f5615499 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 455 3.3E-205 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 WS_RS08240 267014d91d5f4140e6a8b2d9f5615499 455 SMART SM00729 47 269 4.4E-60 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS08240 267014d91d5f4140e6a8b2d9f5615499 455 Pfam PF04055 Radical SAM superfamily 52 225 1.2E-20 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS08240 267014d91d5f4140e6a8b2d9f5615499 455 PIRSF PIRSF000167 2 451 1.1E-172 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 WS_RS08240 267014d91d5f4140e6a8b2d9f5615499 455 SUPERFAMILY SSF102114 7 440 2.35E-136 T 11-11-2016 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 SUPERFAMILY SSF51246 331 447 1.05E-40 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 Gene3D G3DSA:3.30.1490.20 129 202 2.8E-29 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 322 4.6E-76 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 8.2E-43 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 3.1E-38 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 SUPERFAMILY SSF52440 1 112 8.63E-45 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 SMART SM00878 336 442 1.4E-57 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 9.2E-197 T 11-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 Gene3D G3DSA:3.40.50.20 1 128 8.8E-51 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 Gene3D G3DSA:3.30.470.20 203 447 2.7E-96 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS06175 a0b510710376c4b02d0e97433a7aa26f 473 SUPERFAMILY SSF56059 82 347 7.42E-67 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 SUPERFAMILY SSF64484 2639 2870 0.0 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 SUPERFAMILY SSF64484 1392 2306 0.0 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.50.100 731 804 8.2E-25 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF00623 RNA polymerase Rpb1, domain 2 1730 1871 5.4E-35 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1392 2881 10.457 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1371 0.0 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:3.90.1100.10 458 607 2.9E-133 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:3.90.1100.10 675 729 2.9E-133 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:3.90.1100.10 19 154 2.9E-133 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04997 RNA polymerase Rpb1, domain 1 1393 1728 1.9E-83 T 11-11-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1093 1105 - T 11-11-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:3.90.1110.10 358 457 2.1E-59 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:3.90.1110.10 156 232 2.1E-59 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04998 RNA polymerase Rpb1, domain 5 2128 2816 5.8E-67 T 11-11-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.50.150 840 949 1.0E-49 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.50.150 1075 1089 1.0E-49 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 1398 2872 0.0 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF00562 RNA polymerase Rpb2, domain 6 734 1295 2.8E-148 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1374 11.707 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 224 3.2E-10 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04561 RNA polymerase Rpb2, domain 2 364 468 2.2E-16 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.50.100 2662 2717 1.9E-9 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF10385 RNA polymerase beta subunit external 1 domain 607 672 1.2E-17 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF05000 RNA polymerase Rpb1, domain 4 2046 2125 1.9E-14 T 11-11-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 SUPERFAMILY SSF64484 371 951 0.0 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 SUPERFAMILY SSF64484 12 228 0.0 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 SUPERFAMILY SSF64484 1069 1375 0.0 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04560 RNA polymerase Rpb2, domain 7 1298 1372 1.3E-24 T 11-11-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.270.10 1090 1274 2.2E-82 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.270.10 805 832 2.2E-82 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04565 RNA polymerase Rpb2, domain 3 529 597 5.5E-30 T 11-11-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.30.150.10 608 672 1.0E-18 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04983 RNA polymerase Rpb1, domain 3 1875 2017 3.6E-24 T 11-11-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 SMART SM00663 1621 1900 2.0E-172 T 11-11-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Pfam PF04563 RNA polymerase beta subunit 27 516 2.1E-23 T 11-11-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.40.20 1803 1873 2.4E-36 T 11-11-2016 WS_RS02315 5a2f251f22e04f9d8f8a98e27250699e 2883 Gene3D G3DSA:2.40.40.20 1735 1762 2.4E-36 T 11-11-2016 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 473 8.2E-159 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 SUPERFAMILY SSF101904 500 817 2.22E-103 T 11-11-2016 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Gene3D G3DSA:3.90.199.10 37 219 2.7E-82 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 4.0E-12 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 705 1.6E-11 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 551 2.5E-9 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 808 6.6E-9 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 759 1.0E-14 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 601 2.4E-7 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Gene3D G3DSA:2.120.10.90 498 807 1.9E-122 T 11-11-2016 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Gene3D G3DSA:3.30.1360.40 239 333 4.2E-36 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 9 811 24.413 T 11-11-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 SUPERFAMILY SSF56719 33 488 3.4E-178 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 11 809 0.0 T 11-11-2016 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 SMART SM00434 14 466 3.0E-291 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 696 1.2E-190 T 11-11-2016 WS_RS01810 d036a96d9c6a6d26ff6db836c101c8d0 828 Gene3D G3DSA:1.10.268.10 365 464 6.2E-38 T 11-11-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS08080 181b2f6bb58079b5290dda67b9581e08 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 204 26.016 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08080 181b2f6bb58079b5290dda67b9581e08 204 Pfam PF00573 Ribosomal protein L4/L1 family 22 202 6.6E-54 T 11-11-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 WS_RS08080 181b2f6bb58079b5290dda67b9581e08 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 24 201 1.3E-60 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08080 181b2f6bb58079b5290dda67b9581e08 204 Gene3D G3DSA:3.40.1370.10 56 201 1.4E-46 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 WS_RS08080 181b2f6bb58079b5290dda67b9581e08 204 SUPERFAMILY SSF52166 3 200 1.1E-58 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 WS_RS02135 1f5f253500f41d0b0c89ab78bda271c1 481 Pfam PF08245 Mur ligase middle domain 165 339 1.5E-21 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS02135 1f5f253500f41d0b0c89ab78bda271c1 481 Gene3D G3DSA:3.40.1190.10 150 356 1.0E-30 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS02135 1f5f253500f41d0b0c89ab78bda271c1 481 Gene3D G3DSA:3.90.190.20 358 473 6.1E-10 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS02135 1f5f253500f41d0b0c89ab78bda271c1 481 SUPERFAMILY SSF53623 159 357 1.57E-31 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS02135 1f5f253500f41d0b0c89ab78bda271c1 481 SUPERFAMILY SSF53244 360 473 9.77E-16 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 PIRSF PIRSF002158 8 275 1.5E-94 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.7E-31 T 11-11-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 SUPERFAMILY SSF50104 128 273 1.44E-59 T 11-11-2016 IPR008991 Translation protein SH3-like domain WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 Gene3D G3DSA:4.10.950.10 197 274 6.9E-32 T 11-11-2016 IPR014726 Ribosomal protein L2, domain 3 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 SMART SM01383 42 118 2.2E-42 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 SUPERFAMILY SSF50249 2 119 4.46E-42 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 Gene3D G3DSA:2.40.50.140 1 114 2.2E-44 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.607 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 5.5E-129 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 11-11-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 SMART SM01382 125 253 7.3E-88 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 Gene3D G3DSA:2.30.30.30 123 196 1.0E-32 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 WS_RS08070 1bbca0651e85b3fbca3e406b7758c34b 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 251 6.2E-55 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 486 4.4E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 486 506 4.4E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 226 239 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 SUPERFAMILY SSF55781 14 168 4.58E-16 T 11-11-2016 IPR029016 GAF domain-like WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 Gene3D G3DSA:3.40.50.300 199 374 2.8E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 Pfam PF02954 Bacterial regulatory protein, Fis family 463 503 8.4E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 Pfam PF13185 GAF domain 56 171 5.1E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 SUPERFAMILY SSF46689 412 506 3.9E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 SUPERFAMILY SSF52540 201 443 2.55E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 Pfam PF00158 Sigma-54 interaction domain 202 368 2.5E-73 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 Gene3D G3DSA:3.30.450.40 14 180 1.2E-18 T 11-11-2016 IPR029016 GAF domain-like WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 Gene3D G3DSA:1.10.8.60 375 426 1.3E-21 T 11-11-2016 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 SMART SM00382 222 387 8.8E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 SMART SM00065 34 182 0.0025 T 11-11-2016 IPR003018 GAF domain GO:0005515 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 414 423 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 WS_RS06695 91b58daf963d85d99641c8299497cf3f 512 Gene3D G3DSA:1.10.10.60 427 506 1.1E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 353 7.0E-16 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 Gene3D G3DSA:1.20.140.10 208 372 1.2E-25 T 11-11-2016 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 3 105 1.9E-17 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 SUPERFAMILY SSF56645 3 217 3.8E-41 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 SUPERFAMILY SSF47203 215 372 1.06E-26 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 112 204 5.4E-10 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 Gene3D G3DSA:1.10.540.10 3 106 2.0E-23 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 PIRSF PIRSF016578 5 354 1.6E-21 T 11-11-2016 WS_RS08595 6f50411e5f9d186734d9335c62cf9a76 374 Gene3D G3DSA:2.40.110.10 112 207 4.4E-12 T 11-11-2016 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 SUPERFAMILY SSF75615 101 159 3.92E-12 T 11-11-2016 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 Gene3D G3DSA:3.30.950.10 290 409 5.0E-17 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 Pfam PF13241 Putative NAD(P)-binding 6 108 8.9E-19 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 Gene3D G3DSA:3.40.50.720 2 105 2.9E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 Gene3D G3DSA:3.30.160.110 106 141 1.4E-11 T 11-11-2016 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 174 406 2.3E-55 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 SUPERFAMILY SSF53790 171 410 3.4E-49 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 Gene3D G3DSA:3.40.1010.10 174 289 4.6E-31 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 175 383 6.7E-27 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 Pfam PF14824 Sirohaem biosynthesis protein central 112 138 7.3E-7 T 11-11-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 SUPERFAMILY SSF51735 3 106 8.75E-14 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS04825 54bd3b1bdcfe3cc95dbb32d1ac60406d 421 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 3 147 7.4E-26 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 WS_RS07370 0b1bf01cf225fe98b53eb352bf102bbc 160 Pfam PF00578 AhpC/TSA family 27 141 5.9E-25 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS07370 0b1bf01cf225fe98b53eb352bf102bbc 160 ProSitePatterns PS00194 Thioredoxin family active site. 54 72 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 WS_RS07370 0b1bf01cf225fe98b53eb352bf102bbc 160 SUPERFAMILY SSF52833 24 150 4.01E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS07370 0b1bf01cf225fe98b53eb352bf102bbc 160 Gene3D G3DSA:3.40.30.10 6 158 1.0E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 5.3E-68 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 Gene3D G3DSA:1.20.5.100 207 233 2.0E-19 T 11-11-2016 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 SUPERFAMILY SSF48179 204 298 9.01E-33 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 SMART SM00984 320 425 6.3E-49 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 Gene3D G3DSA:3.40.50.720 235 440 3.2E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 SUPERFAMILY SSF52413 305 435 4.71E-36 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 PIRSF PIRSF000124 1 440 1.3E-150 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 Gene3D G3DSA:3.40.50.720 1 206 1.2E-80 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 421 1.2E-139 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 1.2E-38 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 SUPERFAMILY SSF51735 1 194 5.82E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 7.7E-30 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS02850 4cd318ea9e318df87d7cc16ed213432f 445 PIRSF PIRSF500134 1 442 2.2E-188 T 11-11-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Pfam PF04851 Type III restriction enzyme, res subunit 15 137 3.3E-12 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 SUPERFAMILY SSF52540 1 417 2.24E-126 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Gene3D G3DSA:3.40.50.300 421 584 1.9E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Pfam PF00271 Helicase conserved C-terminal domain 440 547 1.6E-19 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 SMART SM00490 462 548 5.3E-19 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Gene3D G3DSA:3.40.50.300 5 88 1.9E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Gene3D G3DSA:3.40.50.300 390 409 1.9E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Gene3D G3DSA:3.40.50.300 277 340 1.9E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 658 41.506 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Pfam PF02151 UvrB/uvrC motif 623 657 1.2E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Pfam PF12344 Ultra-violet resistance protein B 554 595 4.9E-18 T 11-11-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 656 1.3E-301 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 SUPERFAMILY SSF52540 335 560 5.74E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Gene3D G3DSA:3.30.2060.10 159 232 5.8E-13 T 11-11-2016 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 Gene3D G3DSA:4.10.860.10 611 657 1.2E-14 T 11-11-2016 IPR001943 UVR domain GO:0005515 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 SUPERFAMILY SSF46600 616 657 1.26E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 WS_RS09215 a9f747b9f9f2d517013940d327bdc05c 658 SMART SM00487 8 428 1.0E-23 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 Gene3D G3DSA:3.10.50.40 158 221 1.7E-8 T 11-11-2016 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 240 2.1E-15 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 SUPERFAMILY SSF54534 135 247 4.52E-27 T 11-11-2016 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 Gene3D G3DSA:1.10.3120.10 222 403 4.2E-41 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 3.5E-25 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 Hamap MF_00303 Trigger factor [tig]. 1 431 18.539 T 11-11-2016 IPR005215 Trigger factor GO:0015031 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 PIRSF PIRSF003095 1 432 1.2E-100 T 11-11-2016 IPR005215 Trigger factor GO:0015031 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 269 426 9.3E-30 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 Gene3D G3DSA:3.30.70.1050 1 119 1.3E-23 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 SUPERFAMILY SSF109998 254 428 1.08E-32 T 11-11-2016 IPR027304 Trigger factor/SurA domain WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 TIGRFAM TIGR00115 tig: trigger factor 14 426 2.2E-110 T 11-11-2016 IPR005215 Trigger factor GO:0015031 WS_RS10405 aa694b29fb85003455b51e63b147edc0 432 SUPERFAMILY SSF102735 1 121 1.22E-22 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00101 Aspartate carbamoyltransferase signature 34 56 3.6E-29 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00101 Aspartate carbamoyltransferase signature 72 81 3.6E-29 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 251 3.6E-29 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 284 3.6E-29 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 3.6E-29 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00101 Aspartate carbamoyltransferase signature 127 144 3.6E-29 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 Gene3D G3DSA:3.40.50.1370 139 267 3.1E-40 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 3 289 2.3E-94 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 2 291 38.097 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 SUPERFAMILY SSF53671 2 290 1.96E-87 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 286 1.7E-21 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 140 1.9E-38 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 44 51 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 1.5E-18 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 277 1.5E-18 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 44 63 1.5E-18 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 242 251 1.5E-18 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02835 12b8aa888062efe22c779d81bc41d701 302 Gene3D G3DSA:3.40.50.1370 3 138 1.7E-45 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 Gene3D G3DSA:3.30.360.10 125 224 2.1E-35 T 11-11-2016 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 PIRSF PIRSF000161 1 256 2.1E-88 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 11-11-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 SUPERFAMILY SSF55347 118 226 5.67E-33 T 11-11-2016 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 SUPERFAMILY SSF51735 226 256 3.55E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 SUPERFAMILY SSF51735 2 117 3.55E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 116 1.3E-26 T 11-11-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 Gene3D G3DSA:3.40.50.720 3 124 3.5E-13 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 119 254 1.1E-40 T 11-11-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 255 5.2E-77 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS02230 544eb4ba2dfc82b9ed879d2a038628e0 256 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 255 31.738 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Gene3D G3DSA:2.40.30.10 841 938 1.6E-36 T 11-11-2016 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 SUPERFAMILY SSF50447 841 937 3.73E-32 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Gene3D G3DSA:3.40.50.300 428 597 6.7E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Pfam PF11987 Translation-initiation factor 2 726 828 6.0E-36 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 SUPERFAMILY SSF52156 716 846 3.14E-35 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 440 597 8.4E-37 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 SUPERFAMILY SSF52540 422 609 4.57E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 354 937 2.5E-258 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Pfam PF00009 Elongation factor Tu GTP binding domain 443 598 3.1E-34 T 11-11-2016 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 361 408 1.4E-9 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.8E-12 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 PRINTS PR00449 Transforming protein P21 ras signature 579 601 6.2E-5 T 11-11-2016 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 PRINTS PR00449 Transforming protein P21 ras signature 538 551 6.2E-5 T 11-11-2016 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 PRINTS PR00449 Transforming protein P21 ras signature 480 502 6.2E-5 T 11-11-2016 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 PRINTS PR00449 Transforming protein P21 ras signature 441 462 6.2E-5 T 11-11-2016 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Gene3D G3DSA:3.40.50.10050 739 817 2.8E-26 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 ProSitePatterns PS01176 Initiation factor 2 signature. 890 912 - T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Gene3D G3DSA:2.40.30.10 609 702 5.8E-19 T 11-11-2016 WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 SUPERFAMILY SSF50447 611 693 1.41E-21 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS09485 df8e466d680298acdd5ee0f95270dd28 939 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 937 16.76 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 Gene3D G3DSA:3.40.50.620 2 178 2.8E-48 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 Gene3D G3DSA:3.30.460.10 185 282 3.2E-25 T 11-11-2016 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 188 282 1.1E-26 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 Pfam PF02410 Ribosomal silencing factor during starvation 189 282 1.1E-21 T 11-11-2016 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 Pfam PF01467 Cytidylyltransferase-like 5 156 6.7E-25 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 SUPERFAMILY SSF81301 186 282 2.78E-24 T 11-11-2016 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 182 23.103 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 184 284 18.094 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 178 7.5E-40 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 SUPERFAMILY SSF52374 3 179 8.85E-43 T 11-11-2016 WS_RS03265 112c73f0ab0bbd53ffc87a4e8eee33a8 294 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 64 1.4E-12 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 WS_RS05605 47282f716455fcd32ff1ca055fa8b2fc 117 Pfam PF03927 NapD protein 1 76 3.8E-24 T 11-11-2016 IPR005623 Chaperone NapD, nitrate reductase assembly WS_RS05605 47282f716455fcd32ff1ca055fa8b2fc 117 PIRSF PIRSF020431 1 117 1.3E-56 T 11-11-2016 IPR005623 Chaperone NapD, nitrate reductase assembly WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 SUPERFAMILY SSF55681 117 427 6.43E-92 T 11-11-2016 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 PIRSF PIRSF001529 1 428 1.4E-154 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 2.1E-163 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 345 361 7.1E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 363 379 7.1E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 288 301 7.1E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 328 341 7.1E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 276 288 7.1E-29 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 Gene3D G3DSA:1.10.287.40 1 105 6.7E-15 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 SUPERFAMILY SSF46589 1 113 1.62E-21 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.9E-20 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 38.039 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 235 411 1.9E-35 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS04185 abde0cdcdc48bf9711023fa20a19bae6 428 Gene3D G3DSA:3.30.930.10 106 428 7.9E-129 T 11-11-2016 WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 SUPERFAMILY SSF56235 1 204 3.69E-56 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 Pfam PF13537 Glutamine amidotransferase domain 42 157 1.5E-39 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 Pfam PF00733 Asparagine synthase 234 603 4.0E-88 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 SUPERFAMILY SSF52402 211 371 2.46E-64 T 11-11-2016 WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 SUPERFAMILY SSF52402 455 601 2.46E-64 T 11-11-2016 WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 Gene3D G3DSA:3.40.50.620 454 602 2.3E-75 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 Gene3D G3DSA:3.40.50.620 214 369 2.3E-75 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 PIRSF PIRSF001589 1 610 3.6E-140 T 11-11-2016 WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 538 5.1E-119 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 WS_RS00205 94fc338cdec95f62a082d77783b2a4e4 610 Gene3D G3DSA:3.60.20.10 1 213 2.4E-57 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 Gene3D G3DSA:1.10.486.10 382 528 5.0E-39 T 11-11-2016 WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 Gene3D G3DSA:3.40.50.300 8 270 2.8E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 Gene3D G3DSA:3.40.50.300 538 619 8.5E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 Gene3D G3DSA:3.40.50.300 275 381 8.5E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 SUPERFAMILY SSF52540 5 618 1.6E-150 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 Pfam PF13361 UvrD-like helicase C-terminal domain 271 597 3.7E-67 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 127 2.6E-28 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 WS_RS04200 8f8cdc1cca616cc1870c496f2433ed16 681 Pfam PF00580 UvrD/REP helicase N-terminal domain 139 265 2.0E-39 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 Pfam PF04055 Radical SAM superfamily 131 304 3.4E-26 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 Pfam PF00919 Uncharacterized protein family UPF0004 1 89 9.5E-24 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 131 151 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 SMART SM00729 127 348 2.4E-53 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 SUPERFAMILY SSF102114 121 352 7.85E-55 T 11-11-2016 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 Gene3D G3DSA:3.80.30.20 126 360 1.2E-74 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 416 6.1E-139 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 418 4.2E-153 T 11-11-2016 WS_RS08360 2d75f337bc495aab1c45c7c2605ae5cc 420 Pfam PF01938 TRAM domain 360 420 3.1E-7 T 11-11-2016 IPR002792 TRAM domain WS_RS06795 bd29b525d3b070bfbacbe5db9096e681 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 125 1.6E-23 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 WS_RS06795 bd29b525d3b070bfbacbe5db9096e681 127 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 6 125 1.4E-59 T 11-11-2016 IPR014171 TonB system transport protein ExbD type-2 GO:0006810|GO:0016020 WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 SUPERFAMILY SSF54862 189 264 9.12E-28 T 11-11-2016 WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 SUPERFAMILY SSF54862 421 543 9.12E-28 T 11-11-2016 WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 Gene3D G3DSA:3.30.70.20 195 271 5.3E-13 T 11-11-2016 WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 Gene3D G3DSA:1.10.1060.10 468 508 5.5E-7 T 11-11-2016 WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 Gene3D G3DSA:3.30.70.20 416 467 1.1E-16 T 11-11-2016 WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 Pfam PF13187 4Fe-4S dicluster domain 214 258 1.1E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 243 254 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 461 472 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS03515 73f18da77d1af14ebabac467cbf7d214 567 Pfam PF13237 4Fe-4S dicluster domain 423 472 1.9E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS02055 ca83a8f9e31d690a35cf0e1d1f29e15d 308 SUPERFAMILY SSF55120 69 288 4.73E-50 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS02055 ca83a8f9e31d690a35cf0e1d1f29e15d 308 Gene3D G3DSA:3.10.290.10 19 61 6.2E-5 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS02055 ca83a8f9e31d690a35cf0e1d1f29e15d 308 Pfam PF00849 RNA pseudouridylate synthase 81 228 6.3E-28 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS02055 ca83a8f9e31d690a35cf0e1d1f29e15d 308 SMART SM00363 14 74 6.4E-4 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS02055 ca83a8f9e31d690a35cf0e1d1f29e15d 308 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 116 130 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 Pfam PF00384 Molybdopterin oxidoreductase 86 579 1.3E-85 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 525 542 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 Pfam PF01568 Molydopterin dinucleotide binding domain 701 818 3.7E-27 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 2.9E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 Gene3D G3DSA:2.40.40.20 675 836 1.4E-58 T 11-11-2016 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 Gene3D G3DSA:3.90.55.10 527 632 5.3E-36 T 11-11-2016 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 SUPERFAMILY SSF53706 44 701 3.66E-169 T 11-11-2016 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 Gene3D G3DSA:3.40.228.10 180 416 5.0E-65 T 11-11-2016 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 842 0.0 T 11-11-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 Gene3D G3DSA:3.40.50.740 446 526 8.0E-45 T 11-11-2016 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 Gene3D G3DSA:3.40.50.740 79 179 8.0E-45 T 11-11-2016 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 740 767 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 WS_RS08690 40af8b83d118e7ac824203b7ba331990 844 SUPERFAMILY SSF50692 695 841 1.27E-44 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 503 51.963 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 503 2.0E-260 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 366 2.8E-77 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 SUPERFAMILY SSF50615 12 95 3.66E-25 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 SUPERFAMILY SSF47917 374 502 8.63E-47 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 Gene3D G3DSA:2.40.30.20 4 95 1.4E-32 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 SUPERFAMILY SSF52540 97 372 1.32E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 PIRSF PIRSF039088 3 504 2.9E-258 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 94 2.0E-13 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 373 498 3.7E-49 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 Gene3D G3DSA:3.40.50.300 97 373 2.5E-119 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02530 9429fa46d8c33a0c81a8aee8c30b2b38 504 Gene3D G3DSA:1.20.150.20 374 502 2.1E-53 T 11-11-2016 WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 SMART SM00267 46 216 1.2E-19 T 11-11-2016 IPR000160 GGDEF domain WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 Pfam PF00990 Diguanylate cyclase, GGDEF domain 60 194 1.1E-19 T 11-11-2016 IPR000160 GGDEF domain WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 SMART SM00052 228 467 3.7E-55 T 11-11-2016 IPR001633 EAL domain WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 Gene3D G3DSA:3.30.70.270 60 223 4.3E-26 T 11-11-2016 WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 Pfam PF00563 EAL domain 235 462 2.0E-59 T 11-11-2016 IPR001633 EAL domain WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 SUPERFAMILY SSF55073 62 209 6.51E-22 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 SUPERFAMILY SSF141868 235 471 2.62E-64 T 11-11-2016 IPR001633 EAL domain WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 Gene3D G3DSA:3.20.20.450 233 465 9.4E-66 T 11-11-2016 IPR001633 EAL domain WS_RS04645 e7c6b88085f3c49c808da9809be5c313 507 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 59 194 1.6E-16 T 11-11-2016 IPR000160 GGDEF domain WS_RS04215 754f3e665df6139ade047aa75f42406c 76 SUPERFAMILY SSF117130 1 55 1.12E-16 T 11-11-2016 WS_RS04215 754f3e665df6139ade047aa75f42406c 76 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 3.0E-20 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 WS_RS04215 754f3e665df6139ade047aa75f42406c 76 Pfam PF02599 Global regulator protein family 1 52 5.9E-22 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 WS_RS04215 754f3e665df6139ade047aa75f42406c 76 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 64 1.6E-24 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 WS_RS04215 754f3e665df6139ade047aa75f42406c 76 Hamap MF_00167 Carbon storage regulator [csrA]. 1 68 18.782 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 WS_RS07860 02595344162d2dbb9ae8b7606df1c44f 181 SUPERFAMILY SSF52499 2 181 7.2E-46 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 WS_RS07860 02595344162d2dbb9ae8b7606df1c44f 181 Pfam PF00857 Isochorismatase family 9 158 4.7E-28 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 WS_RS07860 02595344162d2dbb9ae8b7606df1c44f 181 Gene3D G3DSA:3.40.50.850 1 181 1.6E-52 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 Gene3D G3DSA:1.10.287.130 233 303 3.7E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 SMART SM00388 242 308 1.4E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 SUPERFAMILY SSF47384 225 308 1.04E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 SMART SM00387 353 462 2.6E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 306 1.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 458 2.5E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 Gene3D G3DSA:3.30.565.10 312 458 2.6E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 SUPERFAMILY SSF55874 298 458 4.19E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS03125 2a60f9a291e77e8c495de242b40672be 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 5.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 Gene3D G3DSA:3.30.160.20 154 219 4.6E-25 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 Pfam PF14622 Ribonuclease-III-like 17 139 2.7E-33 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 219 5.0E-75 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 218 30.196 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 SMART SM00358 155 222 6.8E-20 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 Gene3D G3DSA:1.10.1520.10 3 148 7.1E-51 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 SMART SM00535 19 148 5.5E-53 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 SUPERFAMILY SSF69065 3 157 1.06E-48 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 SUPERFAMILY SSF54768 109 221 4.56E-23 T 11-11-2016 WS_RS08920 90a1f1694bdc4783f99cf206ca892ee2 238 Pfam PF00035 Double-stranded RNA binding motif 155 219 4.9E-15 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain WS_RS00160 f6672f22b5576389d65ebc48130eb2e4 98 Gene3D G3DSA:3.30.70.1060 3 87 3.8E-10 T 11-11-2016 WS_RS00160 f6672f22b5576389d65ebc48130eb2e4 98 Pfam PF03795 YCII-related domain 5 85 2.8E-11 T 11-11-2016 IPR005545 YCII-related WS_RS00160 f6672f22b5576389d65ebc48130eb2e4 98 SUPERFAMILY SSF54909 3 87 1.72E-19 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 Pfam PF01584 CheW-like domain 17 149 1.9E-36 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 Gene3D G3DSA:2.30.30.40 86 134 2.3E-8 T 11-11-2016 WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 Gene3D G3DSA:2.40.50.180 49 85 2.0E-7 T 11-11-2016 WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 SMART SM00448 168 290 1.2E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 Pfam PF00072 Response regulator receiver domain 171 280 6.4E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 SMART SM00260 1 147 3.1E-33 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 SUPERFAMILY SSF52172 170 296 1.85E-24 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 PIRSF PIRSF002867 1 298 1.9E-93 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 SUPERFAMILY SSF50341 16 150 1.27E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09830 18fa5065cc77d756a2dfb54267df472e 300 Gene3D G3DSA:3.40.50.2300 171 298 5.9E-27 T 11-11-2016 WS_RS05035 b1ce78c03c28ace8a5e4018723a98af1 536 SMART SM00283 260 535 5.5E-29 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05035 b1ce78c03c28ace8a5e4018723a98af1 536 Gene3D G3DSA:1.10.287.950 291 524 2.5E-41 T 11-11-2016 WS_RS05035 b1ce78c03c28ace8a5e4018723a98af1 536 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 167 3.0E-8 T 11-11-2016 IPR024478 4HB MCP domain WS_RS05035 b1ce78c03c28ace8a5e4018723a98af1 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 534 6.3E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05035 b1ce78c03c28ace8a5e4018723a98af1 536 SUPERFAMILY SSF58104 227 536 4.05E-51 T 11-11-2016 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:3.40.50.1380 953 1079 7.2E-34 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SUPERFAMILY SSF48108 392 542 6.02E-40 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.0E-62 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.0E-62 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 4.0E-62 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 4.0E-62 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 4.0E-62 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 4.0E-62 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 4.0E-62 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 418 541 7.3E-36 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SUPERFAMILY SSF52440 1 125 4.46E-44 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:1.10.1030.10 396 531 7.3E-41 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Pfam PF02142 MGS-like domain 973 1057 2.0E-19 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:3.40.50.20 4 107 5.9E-43 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SMART SM01096 415 542 7.0E-54 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 840 847 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:3.30.470.20 198 395 9.7E-74 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:3.30.470.20 748 949 1.8E-68 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SUPERFAMILY SSF52335 953 1085 7.59E-33 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:3.30.1490.20 142 197 1.6E-20 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:3.30.1490.20 688 747 1.3E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SUPERFAMILY SSF56059 126 397 2.12E-104 T 11-11-2016 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1067 0.0 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 1.4E-67 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 675 870 1.0E-34 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SUPERFAMILY SSF56059 675 949 5.3E-97 T 11-11-2016 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SUPERFAMILY SSF52440 559 677 3.02E-47 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 SMART SM00851 971 1057 1.6E-29 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Gene3D G3DSA:3.40.50.20 532 664 1.7E-55 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 711 725 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS10120 3d740ee7e88235baec285ad4ad4c2a02 1089 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1077 12.744 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS06155 40edc2ddac3228ac3eb757f0ae691c4d 311 SMART SM01245 3 54 2.5E-21 T 11-11-2016 IPR032782 Jag, N-terminal WS_RS06155 40edc2ddac3228ac3eb757f0ae691c4d 311 Gene3D G3DSA:3.30.300.120 163 238 8.9E-11 T 11-11-2016 WS_RS06155 40edc2ddac3228ac3eb757f0ae691c4d 311 Pfam PF14804 Jag N-terminus 4 52 4.0E-18 T 11-11-2016 IPR032782 Jag, N-terminal WS_RS06155 40edc2ddac3228ac3eb757f0ae691c4d 311 Gene3D G3DSA:3.30.30.80 2 52 1.4E-19 T 11-11-2016 IPR032782 Jag, N-terminal WS_RS05140 813e6b379032209daf21b980cb551c21 184 SUPERFAMILY SSF53323 1 179 6.41E-36 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 WS_RS05140 813e6b379032209daf21b980cb551c21 184 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 174 5.4E-27 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 WS_RS05140 813e6b379032209daf21b980cb551c21 184 Gene3D G3DSA:3.40.920.10 1 179 2.9E-30 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 SUPERFAMILY SSF52540 1 232 1.77E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 Pfam PF09383 NIL domain 247 316 3.8E-17 T 11-11-2016 IPR018449 NIL domain WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 SMART SM00930 244 317 2.7E-23 T 11-11-2016 IPR018449 NIL domain WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 Gene3D G3DSA:3.30.70.260 231 317 5.7E-18 T 11-11-2016 WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 SUPERFAMILY SSF55021 230 317 4.92E-18 T 11-11-2016 WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 Gene3D G3DSA:3.40.50.300 1 230 7.0E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 Pfam PF00005 ABC transporter 16 164 9.5E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 SMART SM00382 25 212 2.7E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS09135 b4c684b36346533adbf78e4c4d9fe1eb 317 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 130 145 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 442 463 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 75 89 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 516 537 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 51 66 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 307 324 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 181 203 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01180 Arginine decarboxylase signature 467 492 6.5E-39 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 119 9.3E-14 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 101 9.3E-14 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 317 336 9.3E-14 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 516 529 9.3E-14 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 224 237 9.3E-14 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 77 327 3.5E-35 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 433 534 1.6E-20 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 Gene3D G3DSA:3.20.20.10 55 315 2.7E-49 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS02715 936147af8771b618f7dd1563acc0e503 615 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 607 1.6E-214 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 Gene3D G3DSA:2.40.37.10 433 547 8.0E-16 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 Gene3D G3DSA:2.40.37.10 316 340 8.0E-16 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 SUPERFAMILY SSF50621 409 538 5.23E-13 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 PIRSF PIRSF001336 1 609 1.3E-207 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 WS_RS02715 936147af8771b618f7dd1563acc0e503 615 SUPERFAMILY SSF51419 52 329 1.81E-53 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS06710 6050f4cf09faeeba96a6123acefea80d 127 PIRSF PIRSF008459 1 127 1.0E-42 T 11-11-2016 IPR016540 Uncharacterised conserved protein UCP008459 WS_RS06710 6050f4cf09faeeba96a6123acefea80d 127 SUPERFAMILY SSF55021 60 124 6.3E-19 T 11-11-2016 WS_RS06710 6050f4cf09faeeba96a6123acefea80d 127 Pfam PF13840 ACT domain 57 117 1.8E-21 T 11-11-2016 IPR027795 GATS-like ACT domain WS_RS06710 6050f4cf09faeeba96a6123acefea80d 127 Gene3D G3DSA:3.30.2130.10 3 120 1.3E-21 T 11-11-2016 WS_RS06710 6050f4cf09faeeba96a6123acefea80d 127 SUPERFAMILY SSF55021 2 58 2.52E-16 T 11-11-2016 WS_RS10660 7c3d5ad5d34540304282848911152dda 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 548 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10660 7c3d5ad5d34540304282848911152dda 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10660 7c3d5ad5d34540304282848911152dda 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 1.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10660 7c3d5ad5d34540304282848911152dda 590 SUPERFAMILY SSF47384 363 437 3.53E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10660 7c3d5ad5d34540304282848911152dda 590 Gene3D G3DSA:3.30.565.10 443 573 5.0E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10660 7c3d5ad5d34540304282848911152dda 590 SUPERFAMILY SSF55785 223 330 7.85E-11 T 11-11-2016 IPR000014 PAS domain WS_RS10660 7c3d5ad5d34540304282848911152dda 590 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 218 335 6.4E-6 T 11-11-2016 IPR000014 PAS domain WS_RS10660 7c3d5ad5d34540304282848911152dda 590 SUPERFAMILY SSF55874 439 573 1.07E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10660 7c3d5ad5d34540304282848911152dda 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 581 1.6E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10660 7c3d5ad5d34540304282848911152dda 590 SMART SM00387 479 588 2.7E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10660 7c3d5ad5d34540304282848911152dda 590 Pfam PF08448 PAS fold 225 330 4.5E-9 T 11-11-2016 IPR013656 PAS fold-4 WS_RS10660 7c3d5ad5d34540304282848911152dda 590 Gene3D G3DSA:3.30.450.20 215 325 1.2E-9 T 11-11-2016 WS_RS07805 a4ad7297176354bf97d06d422f60c7e0 193 PIRSF PIRSF000370 1 193 4.6E-48 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 WS_RS07805 a4ad7297176354bf97d06d422f60c7e0 193 Gene3D G3DSA:3.20.20.70 16 110 3.4E-17 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS07805 a4ad7297176354bf97d06d422f60c7e0 193 SUPERFAMILY SSF102114 13 109 5.89E-17 T 11-11-2016 WS_RS07805 a4ad7297176354bf97d06d422f60c7e0 193 Pfam PF13394 4Fe-4S single cluster domain 23 106 8.5E-13 T 11-11-2016 WS_RS07805 a4ad7297176354bf97d06d422f60c7e0 193 Pfam PF04055 Radical SAM superfamily 25 139 1.0E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS07805 a4ad7297176354bf97d06d422f60c7e0 193 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 193 34.189 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 WS_RS10155 b451474c64bb9cd2889501f1cbe4a53c 285 SUPERFAMILY SSF46626 29 154 2.15E-22 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS10155 b451474c64bb9cd2889501f1cbe4a53c 285 Pfam PF02167 Cytochrome C1 family 236 283 5.6E-5 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 WS_RS10155 b451474c64bb9cd2889501f1cbe4a53c 285 Pfam PF00034 Cytochrome c 53 152 6.0E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS10155 b451474c64bb9cd2889501f1cbe4a53c 285 Gene3D G3DSA:1.20.5.100 252 285 1.6E-13 T 11-11-2016 WS_RS10155 b451474c64bb9cd2889501f1cbe4a53c 285 SUPERFAMILY SSF46626 161 270 4.4E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS10155 b451474c64bb9cd2889501f1cbe4a53c 285 Gene3D G3DSA:1.10.760.10 169 248 5.5E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS10155 b451474c64bb9cd2889501f1cbe4a53c 285 Gene3D G3DSA:1.10.760.10 5 168 9.4E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS05405 d958a215763235d209c40c8b8a536a84 683 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 141 3.4E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS05405 d958a215763235d209c40c8b8a536a84 683 Gene3D G3DSA:2.170.130.10 41 144 9.7E-29 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS05405 d958a215763235d209c40c8b8a536a84 683 Gene3D G3DSA:2.40.170.20 145 683 2.5E-76 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS05405 d958a215763235d209c40c8b8a536a84 683 SUPERFAMILY SSF56935 42 683 1.54E-100 T 11-11-2016 WS_RS05405 d958a215763235d209c40c8b8a536a84 683 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 666 683 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site WS_RS05405 d958a215763235d209c40c8b8a536a84 683 Pfam PF00593 TonB dependent receptor 439 682 1.1E-29 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Gene3D G3DSA:3.90.105.10 141 157 4.0E-16 T 11-11-2016 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Gene3D G3DSA:3.90.105.10 25 47 4.0E-16 T 11-11-2016 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 SMART SM00852 179 318 5.0E-35 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Gene3D G3DSA:3.40.980.10 158 332 4.4E-49 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 SUPERFAMILY SSF53218 177 322 1.2E-33 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Pfam PF03454 MoeA C-terminal region (domain IV) 330 403 7.8E-5 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Gene3D G3DSA:2.170.190.11 48 139 7.3E-22 T 11-11-2016 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 165 8.1E-32 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Gene3D G3DSA:2.40.340.10 333 400 3.0E-7 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 311 2.3E-25 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 Pfam PF00994 Probable molybdopterin binding domain 180 313 1.4E-25 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 SUPERFAMILY SSF63882 6 174 1.44E-45 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS05720 c1ba240a47437cd701dc1ef5a81a19b8 413 SUPERFAMILY SSF63867 327 404 4.06E-10 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 16 542 2.3E-126 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 Pfam PF00733 Asparagine synthase 235 602 6.0E-89 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 SUPERFAMILY SSF56235 4 209 5.58E-54 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 Gene3D G3DSA:3.60.20.10 5 212 1.5E-55 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 PIRSF PIRSF001589 5 608 1.1E-136 T 11-11-2016 WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 Pfam PF13537 Glutamine amidotransferase domain 45 160 4.1E-34 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 SUPERFAMILY SSF52402 228 378 3.35E-70 T 11-11-2016 WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 SUPERFAMILY SSF52402 463 560 3.35E-70 T 11-11-2016 WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 Gene3D G3DSA:3.40.50.620 458 603 5.9E-80 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS10295 8a17bc628d5fbc406c8389f2468833de 608 Gene3D G3DSA:3.40.50.620 216 374 5.9E-80 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 Hamap MF_00082_B Acetylglutamate kinase [argB]. 22 283 34.81 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 TIGRFAM TIGR00761 argB: acetylglutamate kinase 25 258 2.2E-75 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 Pfam PF00696 Amino acid kinase family 25 260 1.7E-44 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 4.9E-6 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 PRINTS PR00474 Glutamate 5-kinase family signature 183 210 4.9E-6 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 PRINTS PR00474 Glutamate 5-kinase family signature 233 253 4.9E-6 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 SUPERFAMILY SSF53633 4 283 9.69E-82 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 Gene3D G3DSA:3.40.1160.10 23 282 5.3E-97 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS10090 a481da6b0e5f16e4224c22e72ed6501b 284 PIRSF PIRSF000728 7 283 1.0E-104 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SUPERFAMILY SSF48452 674 757 7.97E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SUPERFAMILY SSF48452 390 495 7.97E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 Pfam PF13432 Tetratricopeptide repeat 117 175 0.0073 T 11-11-2016 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 Pfam PF13432 Tetratricopeptide repeat 444 483 0.019 T 11-11-2016 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SUPERFAMILY SSF48452 113 183 3.22E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SUPERFAMILY SSF48452 447 496 3.22E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SUPERFAMILY SSF48452 283 347 3.22E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 Gene3D G3DSA:1.25.40.10 678 768 1.2E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 Gene3D G3DSA:1.25.40.10 436 495 1.2E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 Gene3D G3DSA:1.25.40.10 112 368 1.9E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 Gene3D G3DSA:1.25.40.10 561 599 1.2E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SMART SM00028 464 497 1.9E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SMART SM00028 277 310 81.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SMART SM00028 711 744 170.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS04190 22f9d9267989ebfbd08a6d222190d57d 792 SMART SM00028 144 177 1.9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS02210 0083502cf946fb1422fe7e8c9765dedc 108 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 108 18.213 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 WS_RS02210 0083502cf946fb1422fe7e8c9765dedc 108 Pfam PF02021 Uncharacterised protein family UPF0102 9 91 1.7E-18 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 WS_RS02210 0083502cf946fb1422fe7e8c9765dedc 108 Gene3D G3DSA:3.40.1350.10 9 106 3.4E-23 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 WS_RS02210 0083502cf946fb1422fe7e8c9765dedc 108 SUPERFAMILY SSF52980 8 104 4.93E-24 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 WS_RS08505 deaf0dce9d11330f31afb86bd7043d7b 250 PIRSF PIRSF004846 4 248 9.0E-53 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 WS_RS08505 deaf0dce9d11330f31afb86bd7043d7b 250 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 27 243 4.4E-52 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 WS_RS08505 deaf0dce9d11330f31afb86bd7043d7b 250 SUPERFAMILY SSF53850 20 246 2.66E-52 T 11-11-2016 WS_RS08505 deaf0dce9d11330f31afb86bd7043d7b 250 Gene3D G3DSA:3.40.190.10 129 193 1.8E-16 T 11-11-2016 WS_RS08505 deaf0dce9d11330f31afb86bd7043d7b 250 Pfam PF13531 Bacterial extracellular solute-binding protein 22 244 2.2E-44 T 11-11-2016 WS_RS08505 deaf0dce9d11330f31afb86bd7043d7b 250 Gene3D G3DSA:3.40.190.10 209 249 9.3E-5 T 11-11-2016 WS_RS08505 deaf0dce9d11330f31afb86bd7043d7b 250 Gene3D G3DSA:3.40.190.10 21 128 4.3E-28 T 11-11-2016 WS_RS01955 8637dfc34ac95455d1a713f3f61f913b 575 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 225 557 2.6E-75 T 11-11-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS01955 8637dfc34ac95455d1a713f3f61f913b 575 SMART SM00790 1 207 5.0E-95 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS01955 8637dfc34ac95455d1a713f3f61f913b 575 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 5 204 7.0E-56 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS01955 8637dfc34ac95455d1a713f3f61f913b 575 SUPERFAMILY SSF56228 2 208 1.7E-56 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS01955 8637dfc34ac95455d1a713f3f61f913b 575 Gene3D G3DSA:1.10.599.10 376 570 2.0E-50 T 11-11-2016 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 WS_RS01955 8637dfc34ac95455d1a713f3f61f913b 575 Gene3D G3DSA:3.60.9.10 3 207 3.0E-61 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS01955 8637dfc34ac95455d1a713f3f61f913b 575 SUPERFAMILY SSF48310 215 566 1.83E-101 T 11-11-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS00115 f229f6613c7accc82bd183d55d004265 609 SUPERFAMILY SSF55073 442 599 2.9E-49 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS00115 f229f6613c7accc82bd183d55d004265 609 Gene3D G3DSA:3.30.70.270 439 602 2.1E-53 T 11-11-2016 WS_RS00115 f229f6613c7accc82bd183d55d004265 609 SMART SM00267 426 598 7.2E-64 T 11-11-2016 IPR000160 GGDEF domain WS_RS00115 f229f6613c7accc82bd183d55d004265 609 Pfam PF00990 Diguanylate cyclase, GGDEF domain 438 594 1.5E-46 T 11-11-2016 IPR000160 GGDEF domain WS_RS00115 f229f6613c7accc82bd183d55d004265 609 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 434 596 7.8E-52 T 11-11-2016 IPR000160 GGDEF domain WS_RS05685 d20091822cef78e4ba27e66f298ceff3 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 4.8E-129 T 11-11-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 WS_RS05685 d20091822cef78e4ba27e66f298ceff3 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 11-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 WS_RS05685 d20091822cef78e4ba27e66f298ceff3 308 Gene3D G3DSA:3.40.50.1100 38 135 9.4E-39 T 11-11-2016 WS_RS05685 d20091822cef78e4ba27e66f298ceff3 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 2.1E-135 T 11-11-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 WS_RS05685 d20091822cef78e4ba27e66f298ceff3 308 SUPERFAMILY SSF53686 1 305 4.32E-103 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS05685 d20091822cef78e4ba27e66f298ceff3 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 292 7.7E-69 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS05685 d20091822cef78e4ba27e66f298ceff3 308 Gene3D G3DSA:3.40.50.1100 136 304 1.8E-75 T 11-11-2016 WS_RS07555 5e3094577b7abd713e2ec322028ab4f6 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 37.43 T 11-11-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 WS_RS07555 5e3094577b7abd713e2ec322028ab4f6 166 SUPERFAMILY SSF52833 1 160 1.36E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS07555 5e3094577b7abd713e2ec322028ab4f6 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-11-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 WS_RS07555 5e3094577b7abd713e2ec322028ab4f6 166 Pfam PF08534 Redoxin 21 160 8.4E-22 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 WS_RS07555 5e3094577b7abd713e2ec322028ab4f6 166 Gene3D G3DSA:3.40.30.10 3 165 1.9E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS09490 9b80ebeb9d09c8021051766ad45e504b 119 Pfam PF02033 Ribosome-binding factor A 9 109 9.3E-15 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 WS_RS09490 9b80ebeb9d09c8021051766ad45e504b 119 Gene3D G3DSA:3.30.300.20 5 118 1.1E-20 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS09490 9b80ebeb9d09c8021051766ad45e504b 119 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 117 14.72 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 WS_RS09490 9b80ebeb9d09c8021051766ad45e504b 119 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 116 2.3E-22 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 WS_RS09490 9b80ebeb9d09c8021051766ad45e504b 119 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 11-11-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 WS_RS09490 9b80ebeb9d09c8021051766ad45e504b 119 SUPERFAMILY SSF89919 7 103 6.41E-17 T 11-11-2016 IPR023799 Ribosome-binding factor A domain WS_RS09490 9b80ebeb9d09c8021051766ad45e504b 119 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 26 97 7.0E-4 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 146 2.1E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.418 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 Gene3D G3DSA:3.10.430.100 61 147 8.1E-25 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 SUPERFAMILY SSF55653 56 148 3.01E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 2.7E-41 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 Gene3D G3DSA:3.40.5.10 1 52 2.0E-20 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.0E-19 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS06205 e7134a898095e728b9ab7af6358d74fa 150 SUPERFAMILY SSF55658 1 57 7.15E-17 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal WS_RS03550 71949ae8ff0e16657c40418dda952507 331 Hamap MF_01962 Adenine deaminase. 7 319 87.017 T 11-11-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 WS_RS03550 71949ae8ff0e16657c40418dda952507 331 SUPERFAMILY SSF51556 7 330 2.57E-86 T 11-11-2016 IPR032466 Metal-dependent hydrolase WS_RS03550 71949ae8ff0e16657c40418dda952507 331 Gene3D G3DSA:3.20.20.140 7 330 2.6E-105 T 11-11-2016 WS_RS03550 71949ae8ff0e16657c40418dda952507 331 Pfam PF00962 Adenosine/AMP deaminase 11 328 8.6E-75 T 11-11-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 WS_RS03550 71949ae8ff0e16657c40418dda952507 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 11 329 5.7E-117 T 11-11-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 Gene3D G3DSA:3.10.20.30 2 74 6.7E-7 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 SUPERFAMILY SSF54862 140 232 5.16E-14 T 11-11-2016 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 121 9.6E-13 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 184 195 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 Pfam PF00037 4Fe-4S binding domain 182 199 1.3E-5 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 Gene3D G3DSA:3.30.70.20 193 222 2.3E-6 T 11-11-2016 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 SMART SM00929 83 123 3.3E-14 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 Gene3D G3DSA:3.30.70.20 101 192 4.1E-11 T 11-11-2016 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 Gene3D G3DSA:2.20.25.90 223 266 3.8E-4 T 11-11-2016 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 4.0E-18 T 11-11-2016 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 SUPERFAMILY SSF54292 1 123 2.32E-31 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 SUPERFAMILY SSF53706 211 418 1.43E-31 T 11-11-2016 WS_RS02370 6b83439f7e643cea9c7ac39df94b2be6 746 SUPERFAMILY SSF53706 445 589 1.43E-31 T 11-11-2016 WS_RS06895 9c9f7fd1c43c7c1ea1341c72ec2ba6b0 1059 Gene3D G3DSA:3.30.420.10 4 81 9.6E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06895 9c9f7fd1c43c7c1ea1341c72ec2ba6b0 1059 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 3 777 2.2E-246 T 11-11-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 WS_RS06895 9c9f7fd1c43c7c1ea1341c72ec2ba6b0 1059 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 2 1039 19.958 T 11-11-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 WS_RS06895 9c9f7fd1c43c7c1ea1341c72ec2ba6b0 1059 Pfam PF13395 HNH endonuclease 573 627 9.8E-23 T 11-11-2016 IPR003615 HNH nuclease WS_RS08020 b7f276003944e833172718ced8bbb9a8 131 Gene3D G3DSA:3.30.1370.30 1 70 2.6E-21 T 11-11-2016 WS_RS08020 b7f276003944e833172718ced8bbb9a8 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 26.389 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08020 b7f276003944e833172718ced8bbb9a8 131 Gene3D G3DSA:3.30.1490.10 75 131 7.7E-22 T 11-11-2016 WS_RS08020 b7f276003944e833172718ced8bbb9a8 131 SUPERFAMILY SSF56047 1 131 7.72E-42 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08020 b7f276003944e833172718ced8bbb9a8 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08020 b7f276003944e833172718ced8bbb9a8 131 Pfam PF00410 Ribosomal protein S8 4 131 2.3E-42 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS07785 2922014050745929b128c5c64590a35e 875 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.1E-27 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 2.1E-27 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 PRINTS PR00986 Valyl-tRNA synthetase signature 43 54 2.1E-27 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 PRINTS PR00986 Valyl-tRNA synthetase signature 447 468 2.1E-27 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 Gene3D G3DSA:1.10.730.10 575 745 1.5E-36 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS07785 2922014050745929b128c5c64590a35e 875 Pfam PF08264 Anticodon-binding domain of tRNA 617 750 6.0E-25 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 WS_RS07785 2922014050745929b128c5c64590a35e 875 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS07785 2922014050745929b128c5c64590a35e 875 Gene3D G3DSA:1.10.287.380 807 870 8.2E-5 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 856 0.0 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 SUPERFAMILY SSF47323 587 802 1.76E-40 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS07785 2922014050745929b128c5c64590a35e 875 SUPERFAMILY SSF50677 199 346 4.19E-61 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 WS_RS07785 2922014050745929b128c5c64590a35e 875 Gene3D G3DSA:3.40.50.620 346 573 5.0E-135 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS07785 2922014050745929b128c5c64590a35e 875 Gene3D G3DSA:3.40.50.620 8 199 5.0E-135 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS07785 2922014050745929b128c5c64590a35e 875 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 575 1.4E-186 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS07785 2922014050745929b128c5c64590a35e 875 Gene3D G3DSA:3.90.740.10 200 342 3.6E-51 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 WS_RS07785 2922014050745929b128c5c64590a35e 875 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 809 874 1.2E-14 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 SUPERFAMILY SSF46589 809 872 3.19E-13 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 WS_RS07785 2922014050745929b128c5c64590a35e 875 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 874 14.863 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 WS_RS07785 2922014050745929b128c5c64590a35e 875 SUPERFAMILY SSF52374 4 196 2.82E-129 T 11-11-2016 WS_RS07785 2922014050745929b128c5c64590a35e 875 SUPERFAMILY SSF52374 346 580 2.82E-129 T 11-11-2016 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 3.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 3.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 3.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 3.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 433 3.6E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 Gene3D G3DSA:1.10.287.130 208 275 6.2E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 SMART SM00388 211 281 2.0E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 SMART SM00387 322 434 8.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 Gene3D G3DSA:3.30.565.10 291 432 1.4E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 SUPERFAMILY SSF47384 206 279 4.32E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00085 4b226237b9e3999bfca604e5488cb459 445 SUPERFAMILY SSF55874 269 439 8.91E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03980 089737bf95630a5b2004f734aef4a033 252 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 109 195 1.1E-9 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03980 089737bf95630a5b2004f734aef4a033 252 PIRSF PIRSF000177 1 252 7.3E-123 T 11-11-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 WS_RS03980 089737bf95630a5b2004f734aef4a033 252 Gene3D G3DSA:1.20.950.10 11 235 4.8E-67 T 11-11-2016 WS_RS03980 089737bf95630a5b2004f734aef4a033 252 SUPERFAMILY SSF81343 8 227 5.36E-59 T 11-11-2016 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 Gene3D G3DSA:3.40.309.10 222 368 4.4E-39 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 38.739 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 Gene3D G3DSA:3.40.605.10 1 219 9.6E-100 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 Gene3D G3DSA:3.40.605.10 369 410 9.6E-100 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 SUPERFAMILY SSF53720 1 410 3.53E-107 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 339 - T 11-11-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 8 400 2.5E-148 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 Pfam PF00171 Aldehyde dehydrogenase family 2 273 6.0E-15 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 WS_RS06225 29d65d19f16a41ecbdc6d400da5713a4 411 PIRSF PIRSF000151 1 411 8.1E-171 T 11-11-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 Pfam PF00563 EAL domain 609 837 1.0E-48 T 11-11-2016 IPR001633 EAL domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 SUPERFAMILY SSF55073 451 585 4.08E-26 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 SMART SM00267 436 591 1.1E-17 T 11-11-2016 IPR000160 GGDEF domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 SMART SM00052 603 842 7.6E-30 T 11-11-2016 IPR001633 EAL domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 SUPERFAMILY SSF55785 332 433 7.85E-26 T 11-11-2016 IPR000014 PAS domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 SUPERFAMILY SSF141868 610 843 1.31E-55 T 11-11-2016 IPR001633 EAL domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 447 563 2.6E-15 T 11-11-2016 IPR000160 GGDEF domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 Gene3D G3DSA:3.30.450.20 339 435 4.4E-25 T 11-11-2016 WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 SMART SM00086 394 436 3.7E-5 T 11-11-2016 IPR001610 PAC motif WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 Gene3D G3DSA:3.30.70.270 448 584 7.4E-28 T 11-11-2016 WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 Pfam PF13426 PAS domain 339 435 4.2E-14 T 11-11-2016 IPR000014 PAS domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 Gene3D G3DSA:3.20.20.450 608 843 1.3E-54 T 11-11-2016 IPR001633 EAL domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 339 441 1.1E-15 T 11-11-2016 IPR000014 PAS domain WS_RS10570 ce66bd2e8d195e6d9764931e4a9b3d7f 845 Pfam PF00990 Diguanylate cyclase, GGDEF domain 448 582 2.5E-21 T 11-11-2016 IPR000160 GGDEF domain WS_RS05390 74b7a0621935ee5888b90b8512dec927 328 SUPERFAMILY SSF81345 3 323 1.57E-69 T 11-11-2016 IPR029022 ABC transporter, BtuC-like WS_RS05390 74b7a0621935ee5888b90b8512dec927 328 Gene3D G3DSA:1.10.3470.10 2 325 3.9E-91 T 11-11-2016 IPR029022 ABC transporter, BtuC-like WS_RS05390 74b7a0621935ee5888b90b8512dec927 328 Pfam PF01032 FecCD transport family 4 322 1.7E-79 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 WS_RS03875 42d10e84421d9ef7776c16387be9c796 127 SUPERFAMILY SSF52833 21 118 7.72E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03875 42d10e84421d9ef7776c16387be9c796 127 Gene3D G3DSA:3.40.30.10 21 80 2.5E-6 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 SMART SM00926 43 102 3.2E-7 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Gene3D G3DSA:3.40.228.10 189 392 1.9E-65 T 11-11-2016 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Pfam PF01568 Molydopterin dinucleotide binding domain 683 792 2.0E-21 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Gene3D G3DSA:2.20.25.90 41 105 2.0E-13 T 11-11-2016 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Gene3D G3DSA:3.40.50.740 393 641 5.6E-67 T 11-11-2016 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Gene3D G3DSA:3.40.50.740 106 188 5.6E-67 T 11-11-2016 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 SUPERFAMILY SSF50692 628 800 2.71E-35 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 4.4E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Pfam PF00384 Molybdopterin oxidoreductase 105 560 1.9E-77 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 4 800 0.0 T 11-11-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Gene3D G3DSA:2.40.40.20 658 800 3.7E-47 T 11-11-2016 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 102 5.1E-11 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 718 745 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 WS_RS06805 630c637ce4e4c2d4d784dacceaa555bb 800 SUPERFAMILY SSF53706 46 684 2.09E-161 T 11-11-2016 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SUPERFAMILY SSF55874 484 641 2.23E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 528 642 3.1E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Gene3D G3DSA:3.30.565.10 489 640 4.3E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SMART SM00086 211 252 180.0 T 11-11-2016 IPR001610 PAC motif WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SMART SM00086 333 375 1.8E-6 T 11-11-2016 IPR001610 PAC motif WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SUPERFAMILY SSF52172 5 136 1.99E-30 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Pfam PF08448 PAS fold 142 253 1.4E-13 T 11-11-2016 IPR013656 PAS fold-4 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Gene3D G3DSA:3.30.450.20 139 250 2.4E-15 T 11-11-2016 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 618 7.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 7.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 640 7.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 7.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Pfam PF00072 Response regulator receiver domain 9 114 4.0E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SMART SM00091 136 207 6.1E-5 T 11-11-2016 IPR000014 PAS domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SMART SM00091 260 326 1.1E-7 T 11-11-2016 IPR000014 PAS domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SMART SM00388 415 485 0.0014 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Pfam PF13426 PAS domain 273 374 4.4E-20 T 11-11-2016 IPR000014 PAS domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SMART SM00448 7 118 1.4E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Gene3D G3DSA:3.40.50.2300 6 130 3.0E-28 T 11-11-2016 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 259 2.5E-9 T 11-11-2016 IPR000014 PAS domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 380 2.2E-25 T 11-11-2016 IPR000014 PAS domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SUPERFAMILY SSF55785 265 373 2.09E-29 T 11-11-2016 IPR000014 PAS domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SUPERFAMILY SSF55785 127 250 6.98E-14 T 11-11-2016 IPR000014 PAS domain WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SUPERFAMILY SSF47384 410 481 2.55E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Gene3D G3DSA:3.30.450.20 269 374 1.6E-28 T 11-11-2016 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 Gene3D G3DSA:1.10.287.130 410 476 9.5E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS09315 d1ce223e1d3058db4363f23dfe536639 645 SMART SM00387 525 643 2.0E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04940 a4581204eaad359672cf87141986418a 420 Gene3D G3DSA:3.40.50.10490 60 177 1.8E-23 T 11-11-2016 WS_RS04940 a4581204eaad359672cf87141986418a 420 SUPERFAMILY SSF53697 59 414 9.74E-86 T 11-11-2016 WS_RS04940 a4581204eaad359672cf87141986418a 420 Gene3D G3DSA:3.40.50.10490 178 399 9.0E-58 T 11-11-2016 WS_RS04940 a4581204eaad359672cf87141986418a 420 Pfam PF00342 Phosphoglucose isomerase 61 408 8.6E-33 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 417 21.49 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 PRINTS PR00662 Glucose-6-phosphate isomerase signature 390 403 2.5E-19 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 PRINTS PR00662 Glucose-6-phosphate isomerase signature 176 194 2.5E-19 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 PRINTS PR00662 Glucose-6-phosphate isomerase signature 65 84 2.5E-19 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 PRINTS PR00662 Glucose-6-phosphate isomerase signature 248 269 2.5E-19 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 PRINTS PR00662 Glucose-6-phosphate isomerase signature 358 376 2.5E-19 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 390 2.5E-19 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04940 a4581204eaad359672cf87141986418a 420 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 390 407 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 Gene3D G3DSA:3.40.50.2030 271 440 7.0E-64 T 11-11-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 35 441 1.6E-158 T 11-11-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 SUPERFAMILY SSF56821 8 441 3.48E-146 T 11-11-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 Hamap MF_00069 Hydroxylamine reductase [hcp]. 8 442 16.023 T 11-11-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 Gene3D G3DSA:1.20.1270.20 38 121 1.1E-31 T 11-11-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 Pfam PF03063 Prismane/CO dehydrogenase family 8 90 4.4E-14 T 11-11-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 Pfam PF03063 Prismane/CO dehydrogenase family 91 438 4.3E-103 T 11-11-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 WS_RS05660 ece64b103c093576f89c8156c5929a24 442 Gene3D G3DSA:3.40.50.2030 124 270 1.4E-54 T 11-11-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 WS_RS00300 c59e7cf3d730922d1119617483445a69 182 SUPERFAMILY SSF53167 17 174 4.32E-21 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 WS_RS00300 c59e7cf3d730922d1119617483445a69 182 Gene3D G3DSA:3.40.50.1580 18 175 2.8E-11 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 Gene3D G3DSA:3.30.360.10 158 312 7.9E-73 T 11-11-2016 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 Gene3D G3DSA:3.40.50.720 3 157 1.4E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 SUPERFAMILY SSF55347 149 311 6.86E-67 T 11-11-2016 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 322 1.2E-124 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 PIRSF PIRSF000149 1 329 3.6E-123 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 154 310 3.4E-65 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 SUPERFAMILY SSF51735 3 165 2.02E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 147 154 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 2.6E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 143 161 2.6E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.6E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 170 186 2.6E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 226 243 2.6E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 149 6.7E-47 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04935 a64b7ba578a07d2fa9e5904115454293 330 SMART SM00846 3 149 8.4E-63 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS05885 6a15662bc4251b42c2fa5b939462426b 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 477 3.2E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05885 6a15662bc4251b42c2fa5b939462426b 558 Gene3D G3DSA:1.10.287.950 349 537 3.7E-47 T 11-11-2016 WS_RS05885 6a15662bc4251b42c2fa5b939462426b 558 SMART SM00283 355 540 3.6E-29 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05885 6a15662bc4251b42c2fa5b939462426b 558 SUPERFAMILY SSF58104 333 545 7.06E-52 T 11-11-2016 WS_RS05885 6a15662bc4251b42c2fa5b939462426b 558 SUPERFAMILY SSF58104 229 258 7.06E-52 T 11-11-2016 WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 PIRSF PIRSF001413 3 401 3.3E-153 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 Gene3D G3DSA:3.40.50.1100 101 183 6.0E-18 T 11-11-2016 WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 394 4.3E-160 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 Gene3D G3DSA:3.40.50.1100 184 397 5.4E-79 T 11-11-2016 WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 396 48.871 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 383 1.5E-45 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS03480 3cc8d0d992dfba9b3364ae952c23ec6e 402 SUPERFAMILY SSF53686 10 394 1.17E-132 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 PRINTS PR01005 Flagellar hook-associated protein signature 160 184 1.5E-8 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 PRINTS PR01005 Flagellar hook-associated protein signature 127 147 1.5E-8 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 PRINTS PR01005 Flagellar hook-associated protein signature 52 74 1.5E-8 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 1.5E-8 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 SUPERFAMILY SSF64518 143 488 1.96E-8 T 11-11-2016 WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 SUPERFAMILY SSF64518 531 606 1.96E-8 T 11-11-2016 WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 552 606 1.0E-13 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain WS_RS01285 e68e52a9d13ca5d1406a1452f71a5466 609 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 413 1.6E-77 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 Pfam PF01165 Ribosomal protein S21 4 56 3.7E-13 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.5E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 18.415 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.0E-7 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.0E-7 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.0E-7 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.0E-7 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03085 f99666cdb3a5d91271e60ebc325f05ea 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 2.0E-10 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 PIRSF PIRSF006092 1 158 3.9E-46 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.7E-21 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.5E-29 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 Gene3D G3DSA:1.10.287.180 1 75 2.5E-31 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 SUPERFAMILY SSF54534 81 156 5.23E-19 T 11-11-2016 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 28.761 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.5E-53 T 11-11-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 SUPERFAMILY SSF46557 3 77 1.7E-27 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 Gene3D G3DSA:3.10.50.30 76 156 1.0E-23 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 WS_RS03835 dddcc1fb52df89c16b4013563160f8a7 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 WS_RS09885 ad83f1f73758c0406f88a380b8b29b46 544 Gene3D G3DSA:3.40.50.300 14 165 9.3E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09885 ad83f1f73758c0406f88a380b8b29b46 544 SUPERFAMILY SSF52540 33 224 5.66E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09885 ad83f1f73758c0406f88a380b8b29b46 544 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 294 4.0E-123 T 11-11-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 WS_RS09885 ad83f1f73758c0406f88a380b8b29b46 544 Gene3D G3DSA:1.10.8.60 166 242 1.5E-27 T 11-11-2016 WS_RS09885 ad83f1f73758c0406f88a380b8b29b46 544 SMART SM00382 36 178 2.7E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS09885 ad83f1f73758c0406f88a380b8b29b46 544 Pfam PF13177 DNA polymerase III, delta subunit 20 177 4.3E-45 T 11-11-2016 WS_RS06310 3a276c56593b4349c59a3004e0fffe6d 115 SUPERFAMILY SSF52833 2 113 9.97E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS06310 3a276c56593b4349c59a3004e0fffe6d 115 Pfam PF03960 ArsC family 5 110 1.9E-12 T 11-11-2016 IPR006660 Arsenate reductase-like WS_RS06310 3a276c56593b4349c59a3004e0fffe6d 115 Gene3D G3DSA:3.40.30.10 2 113 1.1E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS06310 3a276c56593b4349c59a3004e0fffe6d 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 110 7.5E-26 T 11-11-2016 IPR006504 Transcriptional regulator Spx/MgsR WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 229 3.4E-66 T 11-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 SUPERFAMILY SSF88946 15 91 7.26E-16 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 SUPERFAMILY SSF88659 93 155 2.75E-6 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 SUPERFAMILY SSF88659 158 230 3.36E-18 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 Pfam PF04545 Sigma-70, region 4 179 227 2.8E-16 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 Pfam PF04542 Sigma-70 region 2 22 90 7.0E-10 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 PRINTS PR00046 Major sigma-70 factor signature 199 214 1.8E-9 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 PRINTS PR00046 Major sigma-70 factor signature 214 225 1.8E-9 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 PRINTS PR00046 Major sigma-70 factor signature 182 194 1.8E-9 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 PRINTS PR00046 Major sigma-70 factor signature 91 104 1.8E-9 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 Gene3D G3DSA:1.10.10.10 175 228 1.0E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 199 225 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS07720 1015e14e35d4ae9b7b6f97043eb66595 234 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 229 3.6E-31 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 Pfam PF08345 Flagellar M-ring protein C-terminal 256 423 3.0E-43 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 Pfam PF01514 Secretory protein of YscJ/FliF family 29 221 2.1E-65 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 PRINTS PR01009 Flagellar M-ring protein signature 123 141 4.3E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 PRINTS PR01009 Flagellar M-ring protein signature 343 367 4.3E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 PRINTS PR01009 Flagellar M-ring protein signature 270 288 4.3E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 PRINTS PR01009 Flagellar M-ring protein signature 198 216 4.3E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 PRINTS PR01009 Flagellar M-ring protein signature 155 169 4.3E-34 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 PIRSF PIRSF004862 1 560 4.7E-128 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 WS_RS09400 323e588841013df7bf5bbbebb333fee9 577 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 6 560 1.8E-160 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:1.20.1270.10 526 599 1.6E-25 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:3.30.420.40 118 190 1.1E-61 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:3.30.420.40 4 52 1.1E-61 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 382 401 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 359 379 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 463 479 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 196 206 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 328 344 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.6E-76 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:3.30.420.40 313 354 7.2E-33 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:3.30.420.40 191 223 7.2E-33 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:3.90.640.10 224 308 2.9E-30 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 1.5E-296 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Pfam PF00012 Hsp70 protein 4 600 3.4E-249 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:2.60.34.10 384 525 4.2E-72 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Gene3D G3DSA:3.30.30.30 53 105 2.9E-20 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 628 36.02 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 SUPERFAMILY SSF53067 1 182 3.15E-59 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 SUPERFAMILY SSF100920 378 534 1.7E-61 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 SUPERFAMILY SSF100934 501 606 3.27E-18 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 SUPERFAMILY SSF53067 186 376 1.67E-64 T 11-11-2016 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 WS_RS02435 8882d49c523dddd54a9f8f837313f685 631 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 WS_RS07685 7ea024d072812ad97c633e1dbfb9d3de 440 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 12 85 1.4E-8 T 11-11-2016 WS_RS07685 7ea024d072812ad97c633e1dbfb9d3de 440 Gene3D G3DSA:1.25.40.10 28 123 3.3E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS07685 7ea024d072812ad97c633e1dbfb9d3de 440 Pfam PF04575 Protein of unknown function (DUF560) 208 434 4.7E-13 T 11-11-2016 IPR007655 Protein of unknown function DUF560 WS_RS07685 7ea024d072812ad97c633e1dbfb9d3de 440 SUPERFAMILY SSF48452 25 122 5.22E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS07685 7ea024d072812ad97c633e1dbfb9d3de 440 Gene3D G3DSA:2.40.160.10 284 421 3.5E-4 T 11-11-2016 IPR023614 Porin domain WS_RS07685 7ea024d072812ad97c633e1dbfb9d3de 440 SMART SM00028 26 59 69.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS07685 7ea024d072812ad97c633e1dbfb9d3de 440 SMART SM00028 60 93 0.013 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 PRINTS PR00996 Glutamate methyltransferase family signature 101 121 7.6E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 7.6E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 PRINTS PR00996 Glutamate methyltransferase family signature 28 41 7.6E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 7.6E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 7.6E-31 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 53 1.9E-9 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 Pfam PF01739 CheR methyltransferase, SAM binding domain 71 269 1.1E-46 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 SUPERFAMILY SSF53335 71 271 9.93E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 Gene3D G3DSA:1.10.155.10 5 69 5.2E-11 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 Gene3D G3DSA:3.40.50.150 70 275 8.5E-55 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 SUPERFAMILY SSF47757 7 70 2.62E-10 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal WS_RS05795 a6babf32f61ab1a72a5c2682b97c37f0 279 SMART SM00138 6 277 8.2E-56 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 Gene3D G3DSA:3.20.20.10 22 253 3.0E-79 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 Gene3D G3DSA:2.40.37.10 254 398 3.4E-50 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 2 398 40.552 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 4 397 4.9E-156 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 22 267 1.4E-59 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 273 374 2.9E-18 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 62 79 3.8E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 365 387 3.8E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 285 303 3.8E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 151 160 3.8E-27 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 213 228 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 1.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 1.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 1.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 257 276 1.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 355 368 1.7E-23 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 SUPERFAMILY SSF50621 241 398 3.56E-54 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS01660 fe1b506cd838d63c13a20435b4fe040f 403 SUPERFAMILY SSF51419 13 269 6.11E-78 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS03640 f546f0c6a94222277c852bdf05f89fe6 81 Pfam PF04324 BFD-like [2Fe-2S] binding domain 19 77 2.7E-8 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 165 335 1.1E-17 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 13 87 1.0E-12 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 Gene3D G3DSA:3.40.50.150 2 63 1.5E-47 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 Gene3D G3DSA:3.40.50.150 263 369 1.5E-47 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 13 29 4.9E-8 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 4.9E-8 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 54 67 4.9E-8 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 SUPERFAMILY SSF53335 8 87 5.44E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 SUPERFAMILY SSF53335 179 369 5.44E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 Gene3D G3DSA:1.10.1020.10 64 88 5.0E-24 T 11-11-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 Gene3D G3DSA:1.10.1020.10 180 253 5.0E-24 T 11-11-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 WS_RS06700 ac6c30bb750055d6fd8914218c985746 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 283 289 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 Gene3D G3DSA:3.30.70.600 2 99 2.1E-42 T 11-11-2016 IPR027486 Ribosomal protein S10 domain WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 3.0E-44 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 11-11-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 SUPERFAMILY SSF54999 3 98 3.27E-37 T 11-11-2016 IPR027486 Ribosomal protein S10 domain WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 26.908 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 4.5E-35 T 11-11-2016 IPR027486 Ribosomal protein S10 domain WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 SMART SM01403 5 99 3.8E-50 T 11-11-2016 IPR027486 Ribosomal protein S10 domain WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 4.6E-21 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 4.6E-21 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08090 42cb6e70a073a36f9e0fd18229ad6b0a 103 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 4.6E-21 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS00625 1ee2c4fec23aa688d221dc5079006b37 432 Pfam PF03553 Na+/H+ antiporter family 145 426 5.7E-64 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 WS_RS00625 1ee2c4fec23aa688d221dc5079006b37 432 Pfam PF13726 Na+-H+ antiporter family 5 91 4.3E-26 T 11-11-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal WS_RS03365 79345284364891b9c3439e65734424ee 228 Gene3D G3DSA:3.30.565.10 76 188 0.001 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03365 79345284364891b9c3439e65734424ee 228 Pfam PF13581 Histidine kinase-like ATPase domain 73 222 1.1E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS05290 259572a4c049e2845f5b1f71d1c6d17c 90 Pfam PF04956 TrbC/VIRB2 family 4 88 8.3E-14 T 11-11-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 SUPERFAMILY SSF51735 121 278 2.74E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 SUPERFAMILY SSF53223 1 120 8.92E-41 T 11-11-2016 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 Gene3D G3DSA:3.40.192.10 5 138 8.1E-49 T 11-11-2016 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 280 8.6E-70 T 11-11-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 4.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 4.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 4.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 4.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 4.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 4.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 4.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 Gene3D G3DSA:3.40.50.720 139 262 3.7E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 281 38.646 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS06420 bd57fb95946880017ed990fc411faa0a 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 119 6.4E-41 T 11-11-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 WS_RS00680 97126a76b3004c61b70c2b88d0cba30b 80 SUPERFAMILY SSF47781 18 77 2.11E-27 T 11-11-2016 IPR010994 RuvA domain 2-like WS_RS00680 97126a76b3004c61b70c2b88d0cba30b 80 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 17 78 2.5E-21 T 11-11-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain WS_RS00680 97126a76b3004c61b70c2b88d0cba30b 80 Pfam PF12836 Helix-hairpin-helix motif 19 77 5.6E-24 T 11-11-2016 WS_RS00680 97126a76b3004c61b70c2b88d0cba30b 80 Gene3D G3DSA:1.10.150.280 16 78 3.6E-22 T 11-11-2016 WS_RS00680 97126a76b3004c61b70c2b88d0cba30b 80 SMART SM00278 27 46 1.5E-5 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS00680 97126a76b3004c61b70c2b88d0cba30b 80 SMART SM00278 57 76 1.2 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS01605 97126a76b3004c61b70c2b88d0cba30b 80 SUPERFAMILY SSF47781 18 77 2.11E-27 T 11-11-2016 IPR010994 RuvA domain 2-like WS_RS01605 97126a76b3004c61b70c2b88d0cba30b 80 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 17 78 2.5E-21 T 11-11-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain WS_RS01605 97126a76b3004c61b70c2b88d0cba30b 80 Pfam PF12836 Helix-hairpin-helix motif 19 77 5.6E-24 T 11-11-2016 WS_RS01605 97126a76b3004c61b70c2b88d0cba30b 80 Gene3D G3DSA:1.10.150.280 16 78 3.6E-22 T 11-11-2016 WS_RS01605 97126a76b3004c61b70c2b88d0cba30b 80 SMART SM00278 27 46 1.5E-5 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS01605 97126a76b3004c61b70c2b88d0cba30b 80 SMART SM00278 57 76 1.2 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 SUPERFAMILY SSF55874 225 372 8.25E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 372 6.2E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 SUPERFAMILY SSF52172 2 133 3.84E-40 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 Gene3D G3DSA:3.40.50.2300 3 129 1.4E-41 T 11-11-2016 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 Gene3D G3DSA:1.10.287.130 152 219 4.2E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 3.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 371 3.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 332 3.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 318 3.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 SUPERFAMILY SSF47384 151 225 4.32E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 Gene3D G3DSA:3.30.565.10 227 371 1.7E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 SMART SM00448 5 116 4.3E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 SMART SM00388 155 225 8.3E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 SMART SM00387 264 374 1.0E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04075 699ab543f84d692a4cce4a811051cf58 379 Pfam PF00072 Response regulator receiver domain 7 116 4.6E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04945 51605f61d0370870188853b6800e9783 319 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 11-11-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PIRSF PIRSF000532 1 314 7.4E-92 T 11-11-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 WS_RS04945 51605f61d0370870188853b6800e9783 319 Pfam PF00365 Phosphofructokinase 2 274 4.4E-92 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 Gene3D G3DSA:3.40.50.450 1 189 1.9E-60 T 11-11-2016 WS_RS04945 51605f61d0370870188853b6800e9783 319 SUPERFAMILY SSF53784 1 290 4.84E-91 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 40.484 T 11-11-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 30 43 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 92 108 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS04945 51605f61d0370870188853b6800e9783 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 9.1E-65 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 WS_RS06180 dae4baf9b917852158982e80dad2ba3a 256 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 253 18.686 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 WS_RS06180 dae4baf9b917852158982e80dad2ba3a 256 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 246 4.6E-78 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 WS_RS06180 dae4baf9b917852158982e80dad2ba3a 256 Pfam PF02673 Bacitracin resistance protein BacA 6 248 6.9E-77 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 WS_RS01505 bdd18f781dce340ca7ceb37844fc48e8 223 SUPERFAMILY SSF52172 1 172 4.83E-33 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS01505 bdd18f781dce340ca7ceb37844fc48e8 223 SMART SM00862 142 217 6.1E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS01505 bdd18f781dce340ca7ceb37844fc48e8 223 Pfam PF00072 Response regulator receiver domain 3 113 4.2E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01505 bdd18f781dce340ca7ceb37844fc48e8 223 Gene3D G3DSA:3.40.50.2300 1 117 1.1E-32 T 11-11-2016 WS_RS01505 bdd18f781dce340ca7ceb37844fc48e8 223 Gene3D G3DSA:1.10.10.10 122 217 9.1E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS01505 bdd18f781dce340ca7ceb37844fc48e8 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 1.7E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS01505 bdd18f781dce340ca7ceb37844fc48e8 223 SMART SM00448 1 112 2.3E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS07015 02b2334d64e5684e3521da83bc6ac4ed 369 Gene3D G3DSA:3.40.50.2300 19 215 7.0E-49 T 11-11-2016 WS_RS07015 02b2334d64e5684e3521da83bc6ac4ed 369 SUPERFAMILY SSF53822 19 363 1.39E-74 T 11-11-2016 IPR028082 Periplasmic binding protein-like I WS_RS07015 02b2334d64e5684e3521da83bc6ac4ed 369 Pfam PF13458 Periplasmic binding protein 19 359 1.1E-51 T 11-11-2016 IPR028081 Leucine-binding protein domain WS_RS07080 f09168ceec2e797acf424a9ef1cec34a 256 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 256 44.541 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS07080 f09168ceec2e797acf424a9ef1cec34a 256 Gene3D G3DSA:3.30.465.10 59 186 1.7E-21 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 WS_RS07080 f09168ceec2e797acf424a9ef1cec34a 256 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 33 256 7.4E-48 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS07080 f09168ceec2e797acf424a9ef1cec34a 256 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 171 256 1.8E-24 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS07080 f09168ceec2e797acf424a9ef1cec34a 256 SUPERFAMILY SSF56176 33 160 5.31E-14 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 WS_RS07080 f09168ceec2e797acf424a9ef1cec34a 256 SUPERFAMILY SSF56194 167 256 1.7E-29 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS07080 f09168ceec2e797acf424a9ef1cec34a 256 Gene3D G3DSA:3.90.78.10 187 256 5.2E-28 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82866 282 479 6.54E-42 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 Gene3D G3DSA:3.30.70.1430 550 642 2.2E-6 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82693 38 129 5.49E-22 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 595 609 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 375 399 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 428 451 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 347 368 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 529 546 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 PRINTS PR00702 Acriflavin resistance protein family signature 320 343 6.4E-63 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82693 259 314 3.82E-13 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82693 131 177 3.82E-13 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 Gene3D G3DSA:1.10.3850.10 782 996 1.7E-56 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82693 542 642 3.84E-11 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 Gene3D G3DSA:3.30.2090.10 690 775 4.9E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 Gene3D G3DSA:3.30.2090.10 180 256 7.0E-5 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 Gene3D G3DSA:3.30.70.1430 38 135 1.3E-26 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 Pfam PF00873 AcrB/AcrD/AcrF family 1 996 2.6E-270 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 Gene3D G3DSA:1.20.1640.10 276 484 1.6E-50 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82866 777 998 2.62E-49 T 11-11-2016 WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82714 690 774 3.14E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS06085 cfe596c6797ccb0cdcef217bc54a3fc8 1009 SUPERFAMILY SSF82714 179 257 3.53E-7 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 Pfam PF02743 Cache domain 45 304 1.1E-22 T 11-11-2016 IPR033479 Double Cache domain 1 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 Gene3D G3DSA:3.30.450.20 173 319 1.5E-29 T 11-11-2016 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 SUPERFAMILY SSF58104 517 687 1.57E-51 T 11-11-2016 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 SUPERFAMILY SSF58104 371 400 1.57E-51 T 11-11-2016 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 550 619 4.6E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 493 522 5.1E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 596 625 5.1E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 567 594 5.1E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 Gene3D G3DSA:1.10.287.950 489 685 4.2E-45 T 11-11-2016 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 SMART SM00304 401 451 28.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 SMART SM00304 341 398 0.36 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS04140 54893f3c67d2e152ac2bced66e921943 689 SMART SM00283 479 688 9.2E-33 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 PIRSF PIRSF000130 1 481 3.0E-206 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 481 85.911 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 SUPERFAMILY SSF54631 94 203 6.06E-29 T 11-11-2016 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 Pfam PF00571 CBS domain 148 203 3.8E-8 T 11-11-2016 IPR000644 CBS domain WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 Pfam PF00571 CBS domain 95 139 1.3E-7 T 11-11-2016 IPR000644 CBS domain WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 SMART SM00116 95 143 4.0E-7 T 11-11-2016 IPR000644 CBS domain WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 SMART SM00116 156 204 2.7E-8 T 11-11-2016 IPR000644 CBS domain WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 448 9.2E-190 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 SMART SM01240 6 468 0.0 T 11-11-2016 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 468 1.3E-161 T 11-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 Gene3D G3DSA:3.20.20.70 3 480 5.0E-197 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 SUPERFAMILY SSF51412 2 89 3.53E-123 T 11-11-2016 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 SUPERFAMILY SSF51412 215 472 3.53E-123 T 11-11-2016 WS_RS08905 d0b6700804e40a5e0b05bd38657620ed 481 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 11-11-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 Gene3D G3DSA:3.40.50.2020 160 284 3.5E-50 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 6.5E-51 T 11-11-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 Gene3D G3DSA:3.40.50.2020 1 159 4.8E-75 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 309 48.756 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 11-11-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 SMART SM01400 4 120 1.7E-82 T 11-11-2016 WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 Pfam PF14572 Phosphoribosyl synthetase-associated domain 202 308 4.4E-30 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 308 3.6E-125 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 WS_RS07700 68d6b3c01ee81253112cbb586bdcd6a1 309 SUPERFAMILY SSF53271 69 301 1.16E-65 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS06765 621efab1393123326b5614101da35aa9 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 245 6.3E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS06765 621efab1393123326b5614101da35aa9 794 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 147 794 4.3E-99 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 WS_RS06765 621efab1393123326b5614101da35aa9 794 Gene3D G3DSA:2.170.130.10 125 253 8.1E-33 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS06765 621efab1393123326b5614101da35aa9 794 Gene3D G3DSA:2.40.170.20 262 794 9.3E-121 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06765 621efab1393123326b5614101da35aa9 794 SUPERFAMILY SSF56935 107 794 5.16E-114 T 11-11-2016 WS_RS06765 621efab1393123326b5614101da35aa9 794 Pfam PF07660 Secretin and TonB N terminus short domain 52 100 3.5E-9 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 WS_RS06765 621efab1393123326b5614101da35aa9 794 Pfam PF00593 TonB dependent receptor 555 793 1.3E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06765 621efab1393123326b5614101da35aa9 794 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 777 794 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site WS_RS06765 621efab1393123326b5614101da35aa9 794 SMART SM00965 52 102 1.2E-12 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 WS_RS00180 3c70fed3447861dd71806f62de24e745 591 Gene3D G3DSA:3.90.25.10 454 533 2.2E-8 T 11-11-2016 WS_RS00180 3c70fed3447861dd71806f62de24e745 591 SUPERFAMILY SSF51735 277 567 4.17E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00180 3c70fed3447861dd71806f62de24e745 591 Gene3D G3DSA:3.40.50.720 277 453 4.5E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00180 3c70fed3447861dd71806f62de24e745 591 SUPERFAMILY SSF53335 148 326 8.47E-7 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00180 3c70fed3447861dd71806f62de24e745 591 Gene3D G3DSA:3.40.50.720 146 237 3.3E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00180 3c70fed3447861dd71806f62de24e745 591 Pfam PF02719 Polysaccharide biosynthesis protein 279 553 6.8E-116 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain WS_RS00740 c0f2f9cc9712d6e5c1c7b7066f20e8e3 408 Gene3D G3DSA:2.70.70.10 266 406 1.4E-22 T 11-11-2016 WS_RS00740 c0f2f9cc9712d6e5c1c7b7066f20e8e3 408 SUPERFAMILY SSF51261 208 405 6.8E-22 T 11-11-2016 IPR011055 Duplicated hybrid motif WS_RS00740 c0f2f9cc9712d6e5c1c7b7066f20e8e3 408 Pfam PF01551 Peptidase family M23 320 401 2.0E-14 T 11-11-2016 IPR016047 Peptidase M23 WS_RS00100 f9d709bbeadb2be24c865dab0f46c7ae 225 Pfam PF08901 Protein of unknown function (DUF1847) 31 197 1.6E-61 T 11-11-2016 IPR014997 Protein of unknown function DUF1847 WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 Pfam PF00013 KH domain 217 260 2.0E-5 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 TIGRFAM TIGR00277 HDIG: HDIG domain 335 412 7.0E-23 T 11-11-2016 IPR006675 HDIG domain WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 Pfam PF12072 Domain of unknown function (DUF3552) 6 207 1.0E-18 T 11-11-2016 IPR022711 Ribonuclease Y, N-terminal WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 Gene3D G3DSA:3.30.1370.10 223 299 1.1E-6 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 SMART SM00322 211 278 2.1E-4 T 11-11-2016 IPR004087 K Homology domain GO:0003676 WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 SMART SM00471 335 441 3.0E-12 T 11-11-2016 IPR003607 HD/PDEase domain WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 SUPERFAMILY SSF54791 211 300 1.5E-13 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 Hamap MF_00335 Ribonuclease Y [rny]. 4 523 22.924 T 11-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 Gene3D G3DSA:1.10.3210.10 319 499 3.3E-37 T 11-11-2016 IPR006674 HD domain WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 15 523 3.6E-183 T 11-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 Pfam PF01966 HD domain 341 431 1.7E-18 T 11-11-2016 IPR006674 HD domain WS_RS00340 ff66df846e1ab4e858afd99f3a113389 523 SUPERFAMILY SSF109604 317 451 1.1E-26 T 11-11-2016 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.0E-102 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 SUPERFAMILY SSF52029 184 376 2.97E-84 T 11-11-2016 IPR027409 GroEL-like apical domain WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.3E-254 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 Gene3D G3DSA:3.50.7.10 189 366 4.7E-101 T 11-11-2016 IPR027409 GroEL-like apical domain WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 41.426 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 Gene3D G3DSA:1.10.560.10 3 188 1.6E-45 T 11-11-2016 IPR027413 GroEL-like equatorial domain WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 SUPERFAMILY SSF54849 138 204 1.99E-26 T 11-11-2016 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 PRINTS PR00298 60kDa chaperonin signature 27 53 5.9E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 PRINTS PR00298 60kDa chaperonin signature 350 375 5.9E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 PRINTS PR00298 60kDa chaperonin signature 398 419 5.9E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 PRINTS PR00298 60kDa chaperonin signature 83 110 5.9E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 PRINTS PR00298 60kDa chaperonin signature 268 291 5.9E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 SUPERFAMILY SSF48592 406 520 5.27E-74 T 11-11-2016 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 SUPERFAMILY SSF48592 7 134 5.27E-74 T 11-11-2016 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 WS_RS01515 574be8ecb9e182e6464ffab25154c71d 546 Gene3D G3DSA:1.10.560.10 367 517 1.3E-38 T 11-11-2016 IPR027413 GroEL-like equatorial domain WS_RS10580 b2363020f09a6bf3a4c3e64a4e333ab5 596 SMART SM00283 383 592 3.4E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10580 b2363020f09a6bf3a4c3e64a4e333ab5 596 Pfam PF12729 Four helix bundle sensory module for signal transduction 42 215 3.2E-20 T 11-11-2016 IPR024478 4HB MCP domain WS_RS10580 b2363020f09a6bf3a4c3e64a4e333ab5 596 Gene3D G3DSA:1.10.287.950 400 588 4.3E-46 T 11-11-2016 WS_RS10580 b2363020f09a6bf3a4c3e64a4e333ab5 596 SUPERFAMILY SSF58104 277 306 2.49E-54 T 11-11-2016 WS_RS10580 b2363020f09a6bf3a4c3e64a4e333ab5 596 SUPERFAMILY SSF58104 382 594 2.49E-54 T 11-11-2016 WS_RS10580 b2363020f09a6bf3a4c3e64a4e333ab5 596 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 526 4.2E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS03710 c491963dcb0ddfbf3cc3196b34a19f58 405 Gene3D G3DSA:3.20.20.450 2 241 1.5E-49 T 11-11-2016 IPR001633 EAL domain WS_RS03710 c491963dcb0ddfbf3cc3196b34a19f58 405 SUPERFAMILY SSF103190 265 397 3.06E-24 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS03710 c491963dcb0ddfbf3cc3196b34a19f58 405 Gene3D G3DSA:3.30.450.20 299 399 5.8E-17 T 11-11-2016 WS_RS03710 c491963dcb0ddfbf3cc3196b34a19f58 405 SMART SM00052 1 242 5.7E-30 T 11-11-2016 IPR001633 EAL domain WS_RS03710 c491963dcb0ddfbf3cc3196b34a19f58 405 SUPERFAMILY SSF141868 3 239 6.54E-57 T 11-11-2016 IPR001633 EAL domain WS_RS03710 c491963dcb0ddfbf3cc3196b34a19f58 405 Pfam PF00563 EAL domain 4 237 7.0E-50 T 11-11-2016 IPR001633 EAL domain WS_RS04470 275cb81bd9a5c8d20199876a65f9c993 428 Pfam PF00501 AMP-binding enzyme 75 280 1.1E-12 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 WS_RS04470 275cb81bd9a5c8d20199876a65f9c993 428 Pfam PF14535 AMP-binding enzyme C-terminal domain 327 423 1.7E-27 T 11-11-2016 IPR028154 AMP-dependent ligase, C-terminal WS_RS04470 275cb81bd9a5c8d20199876a65f9c993 428 PIRSF PIRSF006444 1 425 1.5E-162 T 11-11-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 WS_RS04470 275cb81bd9a5c8d20199876a65f9c993 428 Gene3D G3DSA:3.30.300.30 317 423 5.9E-33 T 11-11-2016 WS_RS04470 275cb81bd9a5c8d20199876a65f9c993 428 SUPERFAMILY SSF56801 36 386 1.7E-54 T 11-11-2016 WS_RS04470 275cb81bd9a5c8d20199876a65f9c993 428 Gene3D G3DSA:3.40.50.980 83 238 2.6E-10 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82693 564 670 1.36E-20 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82714 184 273 2.22E-19 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 Gene3D G3DSA:3.30.2090.10 721 806 7.4E-23 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 8.2E-97 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 Gene3D G3DSA:1.10.3850.10 813 1027 1.3E-60 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 Gene3D G3DSA:1.10.3850.10 283 501 4.6E-60 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82714 721 807 3.53E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82693 40 132 4.19E-25 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1031 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82866 830 1027 1.57E-48 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 Gene3D G3DSA:3.30.2090.10 183 277 5.6E-25 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82693 672 720 9.68E-28 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82693 807 856 9.68E-28 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82693 137 183 3.66E-25 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82693 276 332 3.66E-25 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 SUPERFAMILY SSF82866 304 499 8.89E-50 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 Gene3D G3DSA:3.30.70.1430 566 670 1.1E-21 T 11-11-2016 WS_RS03700 e36f1349ab9d388c5bde7c21daa9e6d9 1044 Gene3D G3DSA:3.30.70.1430 40 139 1.6E-30 T 11-11-2016 WS_RS10050 09eb43a25edb36a11b785b5cdd23ca4c 407 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 21 245 4.4E-74 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 WS_RS10050 09eb43a25edb36a11b785b5cdd23ca4c 407 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 268 372 5.0E-24 T 11-11-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II WS_RS10050 09eb43a25edb36a11b785b5cdd23ca4c 407 Gene3D G3DSA:3.40.50.920 259 394 2.0E-33 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS10050 09eb43a25edb36a11b785b5cdd23ca4c 407 Gene3D G3DSA:3.40.50.970 9 257 9.7E-86 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS10050 09eb43a25edb36a11b785b5cdd23ca4c 407 SUPERFAMILY SSF52518 11 257 7.07E-68 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS10050 09eb43a25edb36a11b785b5cdd23ca4c 407 SUPERFAMILY SSF52922 259 388 1.57E-32 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 SMART SM00072 5 188 1.5E-64 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 Gene3D G3DSA:3.40.50.300 17 44 1.9E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 185 3.9E-70 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 Pfam PF00625 Guanylate kinase 8 181 1.2E-50 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 Gene3D G3DSA:3.40.50.300 88 187 6.5E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 Gene3D G3DSA:3.40.50.300 2 16 6.5E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 Hamap MF_00328 Guanylate kinase [gmk]. 4 188 35.46 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-11-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 Gene3D G3DSA:3.30.63.10 45 87 4.8E-30 T 11-11-2016 WS_RS00955 9be3ad749f7278d0e55951b7c0de6765 215 SUPERFAMILY SSF52540 4 191 4.65E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08115 722b101071adea6eef99a4a2473cf976 346 Gene3D G3DSA:3.80.30.20 3 216 1.3E-24 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS08115 722b101071adea6eef99a4a2473cf976 346 SMART SM00729 1 214 3.7E-36 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS08115 722b101071adea6eef99a4a2473cf976 346 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 344 3.0E-89 T 11-11-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 WS_RS08115 722b101071adea6eef99a4a2473cf976 346 Pfam PF04055 Radical SAM superfamily 6 153 2.1E-16 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS08115 722b101071adea6eef99a4a2473cf976 346 SUPERFAMILY SSF102114 2 332 1.57E-75 T 11-11-2016 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 Pfam PF02910 Fumarate reductase flavoprotein C-term 421 520 5.6E-26 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 Gene3D G3DSA:3.90.700.10 230 323 1.6E-30 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 PIRSF PIRSF000171 1 540 2.0E-38 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 SUPERFAMILY SSF51905 3 247 2.43E-64 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 SUPERFAMILY SSF51905 331 396 2.43E-64 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 Gene3D G3DSA:3.50.50.60 324 388 2.9E-97 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 Gene3D G3DSA:3.50.50.60 3 229 2.9E-97 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.5E-7 T 11-11-2016 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 330 352 6.5E-7 T 11-11-2016 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 Gene3D G3DSA:1.20.58.100 400 510 1.4E-29 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.0E-5 T 11-11-2016 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 352 1.0E-5 T 11-11-2016 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 SUPERFAMILY SSF46977 413 534 2.49E-33 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 SUPERFAMILY SSF56425 224 327 2.69E-33 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS06675 86e92a95ec7f586151f199d5fb77ad61 551 Pfam PF00890 FAD binding domain 4 367 2.5E-95 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 624 735 2.1E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10555 32851ac9d846826dee236345c8f022c7 739 SUPERFAMILY SSF55874 581 732 1.96E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10555 32851ac9d846826dee236345c8f022c7 739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 379 494 4.0E-12 T 11-11-2016 IPR000014 PAS domain WS_RS10555 32851ac9d846826dee236345c8f022c7 739 Pfam PF08448 PAS fold 384 489 5.3E-11 T 11-11-2016 IPR013656 PAS fold-4 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 Gene3D G3DSA:3.30.450.20 361 485 4.6E-17 T 11-11-2016 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 733 5.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 714 5.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 681 5.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 695 5.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 Gene3D G3DSA:3.30.565.10 580 732 1.1E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10555 32851ac9d846826dee236345c8f022c7 739 SUPERFAMILY SSF55785 361 485 5.41E-16 T 11-11-2016 IPR000014 PAS domain WS_RS10555 32851ac9d846826dee236345c8f022c7 739 SMART SM00387 622 736 6.4E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10555 32851ac9d846826dee236345c8f022c7 739 SUPERFAMILY SSF47384 498 578 1.55E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 Gene3D G3DSA:3.40.50.2300 233 283 6.8E-4 T 11-11-2016 WS_RS10555 32851ac9d846826dee236345c8f022c7 739 SMART SM00091 374 440 0.0023 T 11-11-2016 IPR000014 PAS domain WS_RS02355 83562b5cbac9a404453635d946c4ec14 408 Gene3D G3DSA:1.10.645.10 13 394 1.5E-62 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02355 83562b5cbac9a404453635d946c4ec14 408 SUPERFAMILY SSF56762 32 408 9.29E-124 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02355 83562b5cbac9a404453635d946c4ec14 408 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 15 408 45.75 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02355 83562b5cbac9a404453635d946c4ec14 408 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 136 408 1.2E-107 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02355 83562b5cbac9a404453635d946c4ec14 408 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 21 408 6.9E-181 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 PRINTS PR00340 P-II protein signature 2 17 3.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 PRINTS PR00340 P-II protein signature 52 75 3.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 PRINTS PR00340 P-II protein signature 83 103 3.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 PRINTS PR00340 P-II protein signature 23 41 3.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 SMART SM00938 4 105 2.8E-65 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 SUPERFAMILY SSF54913 1 112 6.04E-46 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.1E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 PIRSF PIRSF039144 1 112 6.9E-56 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02015 39f09241c96e546f067bf5e7bd657c48 112 Gene3D G3DSA:3.30.70.120 1 112 7.1E-50 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 463 605 5.5E-49 T 11-11-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 SUPERFAMILY SSF51206 10 137 5.11E-20 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 Gene3D G3DSA:3.10.580.10 151 270 9.0E-16 T 11-11-2016 WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 SMART SM00100 16 128 7.2E-6 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 SUPERFAMILY SSF54631 145 270 1.02E-15 T 11-11-2016 WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 Pfam PF03445 Putative nucleotidyltransferase DUF294 298 424 6.4E-38 T 11-11-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 Gene3D G3DSA:2.60.120.10 9 136 3.4E-18 T 11-11-2016 IPR014710 RmlC-like jelly roll fold WS_RS02920 da761a6c1a4801a746617bfd04a24b41 611 Pfam PF00027 Cyclic nucleotide-binding domain 36 116 2.4E-11 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 SUPERFAMILY SSF46785 141 207 1.77E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 SMART SM00100 4 122 0.0087 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 SMART SM00419 151 199 7.5E-7 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 Gene3D G3DSA:2.60.120.10 3 129 1.3E-29 T 11-11-2016 IPR014710 RmlC-like jelly roll fold WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 Pfam PF00027 Cyclic nucleotide-binding domain 23 108 7.9E-13 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 Gene3D G3DSA:1.10.10.10 157 207 1.4E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 Pfam PF13545 Crp-like helix-turn-helix domain 155 206 9.8E-12 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 WS_RS05650 4024650e1cd1eae4c023becbe9da2abc 208 SUPERFAMILY SSF51206 4 130 1.3E-27 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 1.7E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 PRINTS PR00046 Major sigma-70 factor signature 409 422 1.7E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 1.7E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 PRINTS PR00046 Major sigma-70 factor signature 433 441 1.7E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 PRINTS PR00046 Major sigma-70 factor signature 557 569 1.7E-29 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Gene3D G3DSA:1.10.10.10 548 619 4.4E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 409 422 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Gene3D G3DSA:1.10.601.10 127 454 1.1E-86 T 11-11-2016 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Gene3D G3DSA:1.10.601.10 4 126 5.6E-6 T 11-11-2016 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Gene3D G3DSA:1.10.10.10 458 509 1.1E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Pfam PF04542 Sigma-70 region 2 387 454 4.3E-21 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 SUPERFAMILY SSF88946 121 452 1.13E-62 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Pfam PF04539 Sigma-70 region 3 464 540 1.9E-23 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Pfam PF00140 Sigma-70 factor, region 1.2 105 135 9.3E-14 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 SUPERFAMILY SSF88659 516 617 2.8E-26 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 SUPERFAMILY SSF88659 458 531 9.16E-17 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Pfam PF04545 Sigma-70, region 4 553 607 1.0E-19 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 4.4E-41 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 381 618 1.6E-116 T 11-11-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 WS_RS08880 e7dd2bd6b186c36b5b61660d5a39db6a 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 1 619 37.289 T 11-11-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 WS_RS01260 c571d6ab404427c295619b0e4aba7f18 309 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 84 294 1.0E-15 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 WS_RS01260 c571d6ab404427c295619b0e4aba7f18 309 Gene3D G3DSA:3.40.50.2000 3 155 1.4E-30 T 11-11-2016 WS_RS01260 c571d6ab404427c295619b0e4aba7f18 309 SUPERFAMILY SSF53756 3 296 9.52E-58 T 11-11-2016 WS_RS01260 c571d6ab404427c295619b0e4aba7f18 309 Gene3D G3DSA:3.40.50.2000 166 295 1.3E-22 T 11-11-2016 WS_RS03555 171c720eb13f8b88663404ea457c0cdb 247 Gene3D G3DSA:3.30.420.40 89 224 2.1E-44 T 11-11-2016 WS_RS03555 171c720eb13f8b88663404ea457c0cdb 247 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 243 3.4E-70 T 11-11-2016 IPR008275 CoA enzyme activase WS_RS03555 171c720eb13f8b88663404ea457c0cdb 247 SUPERFAMILY SSF53067 1 244 2.77E-43 T 11-11-2016 WS_RS03555 171c720eb13f8b88663404ea457c0cdb 247 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 244 5.9E-48 T 11-11-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 WS_RS02345 310663271b6fdb84c0822262bc55bed5 169 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 12 155 41.782 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02345 310663271b6fdb84c0822262bc55bed5 169 Gene3D G3DSA:3.40.50.700 26 158 2.1E-31 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02345 310663271b6fdb84c0822262bc55bed5 169 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 42 148 6.5E-23 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02345 310663271b6fdb84c0822262bc55bed5 169 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 16 157 1.1E-73 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02345 310663271b6fdb84c0822262bc55bed5 169 SUPERFAMILY SSF56770 15 159 3.79E-65 T 11-11-2016 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 609 39.784 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 ProSitePatterns PS00802 Transketolase signature 2. 408 424 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Gene3D G3DSA:3.40.50.920 479 608 2.0E-23 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 266 2.3E-96 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Pfam PF02780 Transketolase, C-terminal domain 479 598 3.6E-19 T 11-11-2016 IPR033248 Transketolase, C-terminal domain WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 SUPERFAMILY SSF52922 475 609 6.81E-24 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 SUPERFAMILY SSF52518 305 489 5.1E-45 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 SUPERFAMILY SSF52518 17 183 2.18E-69 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 SUPERFAMILY SSF52518 227 364 2.18E-69 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 ProSitePatterns PS00801 Transketolase signature 1. 19 38 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Gene3D G3DSA:3.40.50.970 276 465 1.7E-62 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Pfam PF02779 Transketolase, pyrimidine binding domain 306 463 3.9E-32 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 2 608 3.5E-248 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Gene3D G3DSA:3.40.50.970 24 174 8.4E-35 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 Gene3D G3DSA:3.40.50.970 216 275 8.4E-35 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS09385 5e3fe562ec9536b0622363ae77f81bc3 619 SMART SM00861 302 467 2.0E-53 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain WS_RS05085 1b241e4b7c6d2f7321d9322834a9a912 139 Pfam PF13690 Chemotaxis phosphatase CheX 44 113 4.1E-9 T 11-11-2016 IPR028051 Chemotaxis phosphatase CheX-like domain WS_RS05085 1b241e4b7c6d2f7321d9322834a9a912 139 SUPERFAMILY SSF103039 49 119 9.94E-8 T 11-11-2016 IPR028976 CheC-like domain WS_RS05085 1b241e4b7c6d2f7321d9322834a9a912 139 Gene3D G3DSA:3.40.1550.10 49 116 1.4E-5 T 11-11-2016 IPR028976 CheC-like domain WS_RS04125 88328f340699e5a8c2acb0244596c76c 319 Gene3D G3DSA:3.40.50.300 25 206 9.7E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04125 88328f340699e5a8c2acb0244596c76c 319 SMART SM00382 63 200 6.3E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS04125 88328f340699e5a8c2acb0244596c76c 319 Gene3D G3DSA:1.10.8.60 207 289 1.6E-13 T 11-11-2016 WS_RS04125 88328f340699e5a8c2acb0244596c76c 319 ProSitePatterns PS00674 AAA-protein family signature. 168 186 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 WS_RS04125 88328f340699e5a8c2acb0244596c76c 319 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 67 197 1.4E-38 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS04125 88328f340699e5a8c2acb0244596c76c 319 SUPERFAMILY SSF52540 25 275 5.16E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00810 8460f6e9e0a16c265250bf486af15520 322 Gene3D G3DSA:3.20.20.70 9 245 5.1E-70 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS00810 8460f6e9e0a16c265250bf486af15520 322 PIRSF PIRSF006621 1 321 3.9E-76 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 WS_RS00810 8460f6e9e0a16c265250bf486af15520 322 SUPERFAMILY SSF51395 11 312 4.03E-71 T 11-11-2016 WS_RS00810 8460f6e9e0a16c265250bf486af15520 322 Pfam PF01207 Dihydrouridine synthase (Dus) 14 309 8.6E-70 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 WS_RS00810 8460f6e9e0a16c265250bf486af15520 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 WS_RS00810 8460f6e9e0a16c265250bf486af15520 322 Gene3D G3DSA:1.10.1200.80 249 313 5.2E-18 T 11-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 Pfam PF00534 Glycosyl transferases group 1 170 327 7.6E-33 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 485 666 2.6E-22 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 Gene3D G3DSA:3.40.50.2000 519 683 1.7E-37 T 11-11-2016 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 Pfam PF13439 Glycosyltransferase Family 4 13 159 9.2E-23 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 SUPERFAMILY SSF53756 2 351 2.05E-81 T 11-11-2016 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 Gene3D G3DSA:3.40.50.2000 144 327 7.6E-31 T 11-11-2016 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 Gene3D G3DSA:3.40.50.2000 354 498 1.2E-18 T 11-11-2016 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 SUPERFAMILY SSF53756 354 683 7.59E-69 T 11-11-2016 WS_RS10525 cf189d7b4958b7cef2c5b93a2cddf4ab 685 Gene3D G3DSA:3.40.50.2000 65 135 1.9E-4 T 11-11-2016 WS_RS10515 e9cd59d7942355a41a1032bd3c0482d8 160 SMART SM00260 9 146 1.4E-12 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS10515 e9cd59d7942355a41a1032bd3c0482d8 160 SUPERFAMILY SSF50341 12 149 1.7E-27 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS10515 e9cd59d7942355a41a1032bd3c0482d8 160 Pfam PF01584 CheW-like domain 14 149 3.4E-27 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS10515 e9cd59d7942355a41a1032bd3c0482d8 160 Gene3D G3DSA:2.40.50.180 52 97 4.4E-7 T 11-11-2016 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 Gene3D G3DSA:3.30.70.890 156 287 7.2E-36 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 Pfam PF00288 GHMP kinases N terminal domain 77 137 2.3E-7 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 PRINTS PR00958 Homoserine kinase signature 124 137 2.4E-28 T 11-11-2016 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 PRINTS PR00958 Homoserine kinase signature 242 257 2.4E-28 T 11-11-2016 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 PRINTS PR00958 Homoserine kinase signature 163 180 2.4E-28 T 11-11-2016 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 PRINTS PR00958 Homoserine kinase signature 8 23 2.4E-28 T 11-11-2016 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 PRINTS PR00958 Homoserine kinase signature 90 105 2.4E-28 T 11-11-2016 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 PIRSF PIRSF000676 1 293 1.8E-83 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 11-11-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 SUPERFAMILY SSF54211 1 151 1.59E-25 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 SUPERFAMILY SSF55060 158 281 2.13E-29 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 Hamap MF_00384 Homoserine kinase [thrB]. 1 291 28.796 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 TIGRFAM TIGR00191 thrB: homoserine kinase 1 289 1.2E-84 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 Gene3D G3DSA:3.30.230.10 1 149 2.6E-47 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS09480 ff4d49bd88c0db8d0caf705fd452103f 293 Pfam PF08544 GHMP kinases C terminal 201 275 6.7E-5 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain WS_RS09595 88bd738950d79b7f8ba16e2250086655 397 Pfam PF08245 Mur ligase middle domain 91 192 2.3E-15 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS09595 88bd738950d79b7f8ba16e2250086655 397 Gene3D G3DSA:3.40.1190.10 62 98 7.5E-6 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS09595 88bd738950d79b7f8ba16e2250086655 397 SUPERFAMILY SSF53623 88 192 1.57E-25 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS09595 88bd738950d79b7f8ba16e2250086655 397 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 3 394 7.2E-95 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS09595 88bd738950d79b7f8ba16e2250086655 397 Gene3D G3DSA:3.90.190.20 260 394 3.4E-43 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS09595 88bd738950d79b7f8ba16e2250086655 397 Gene3D G3DSA:3.40.1190.10 99 191 1.4E-30 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS09595 88bd738950d79b7f8ba16e2250086655 397 SUPERFAMILY SSF53244 260 394 3.57E-34 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 Gene3D G3DSA:3.30.70.270 406 549 8.4E-16 T 11-11-2016 WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 SUPERFAMILY SSF54631 280 395 3.54E-11 T 11-11-2016 WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 SMART SM00267 390 567 7.5E-6 T 11-11-2016 IPR000160 GGDEF domain WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 Pfam PF00563 EAL domain 14 234 5.8E-25 T 11-11-2016 IPR001633 EAL domain WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 Pfam PF00990 Diguanylate cyclase, GGDEF domain 407 507 1.5E-10 T 11-11-2016 IPR000160 GGDEF domain WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 Gene3D G3DSA:3.10.580.10 277 396 2.5E-10 T 11-11-2016 WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 Gene3D G3DSA:3.20.20.450 14 235 2.5E-23 T 11-11-2016 IPR001633 EAL domain WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 416 496 1.2E-11 T 11-11-2016 IPR000160 GGDEF domain WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 SUPERFAMILY SSF55073 408 493 2.75E-15 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 SMART SM00052 1 241 8.5E-5 T 11-11-2016 IPR001633 EAL domain WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 SUPERFAMILY SSF141868 13 235 2.48E-30 T 11-11-2016 IPR001633 EAL domain WS_RS04525 90274c6d7bd6b1df0c9ec612eb9828c7 585 Pfam PF00571 CBS domain 277 322 4.0E-5 T 11-11-2016 IPR000644 CBS domain WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 2 47 6.7E-10 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 394 401 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 PRINTS PR00045 Sigma-54 factor signature 150 167 3.7E-17 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 PRINTS PR00045 Sigma-54 factor signature 318 330 3.7E-17 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 PRINTS PR00045 Sigma-54 factor signature 334 345 3.7E-17 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 PRINTS PR00045 Sigma-54 factor signature 389 407 3.7E-17 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 PIRSF PIRSF000774 1 416 1.3E-76 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 7 413 3.1E-108 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 Pfam PF04963 Sigma-54 factor, core binding domain 76 252 4.6E-37 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 WS_RS09905 baa0209f5b2e486bea77f386b6fd6f42 420 Pfam PF04552 Sigma-54, DNA binding domain 261 414 4.0E-49 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 Pfam PF00890 FAD binding domain 47 499 5.3E-71 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 Gene3D G3DSA:3.90.700.10 320 451 8.3E-28 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 47 513 1.3E-139 T 11-11-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 SUPERFAMILY SSF56425 304 460 8.97E-33 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 Gene3D G3DSA:3.50.50.60 456 515 2.8E-82 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 Gene3D G3DSA:3.50.50.60 36 295 2.8E-82 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 SUPERFAMILY SSF51905 459 515 6.66E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS00580 4ac8665662131b7a727c57fb8131a118 515 SUPERFAMILY SSF51905 41 312 6.66E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS09390 f973a197387a41e87327aabc240ab04a 283 Pfam PF02108 Flagellar assembly protein FliH 144 269 2.4E-22 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE WS_RS09390 f973a197387a41e87327aabc240ab04a 283 SUPERFAMILY SSF160527 188 276 5.49E-5 T 11-11-2016 WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 Pfam PF13247 4Fe-4S dicluster domain 52 114 2.7E-13 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 Pfam PF13247 4Fe-4S dicluster domain 159 193 7.8E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 Gene3D G3DSA:3.30.70.20 67 115 3.9E-21 T 11-11-2016 WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 Gene3D G3DSA:3.30.70.20 4 66 4.2E-39 T 11-11-2016 WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 Gene3D G3DSA:3.30.70.20 164 227 4.2E-39 T 11-11-2016 WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 SUPERFAMILY SSF54862 160 226 9.1E-66 T 11-11-2016 WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 SUPERFAMILY SSF54862 3 113 9.1E-66 T 11-11-2016 WS_RS03680 bf88dd4072d8b6e0c5ad6cc6f2ce7582 232 Pfam PF12800 4Fe-4S binding domain 12 26 0.084 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS07810 9edc9de58b9147a490952036544aaae5 233 Pfam PF06508 Queuosine biosynthesis protein QueC 14 229 1.6E-71 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 WS_RS07810 9edc9de58b9147a490952036544aaae5 233 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 14 222 4.6E-72 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 WS_RS07810 9edc9de58b9147a490952036544aaae5 233 Gene3D G3DSA:3.40.50.620 13 230 1.1E-71 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS07810 9edc9de58b9147a490952036544aaae5 233 SUPERFAMILY SSF52402 13 229 3.09E-55 T 11-11-2016 WS_RS07810 9edc9de58b9147a490952036544aaae5 233 PIRSF PIRSF006293 10 232 2.2E-69 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 WS_RS07810 9edc9de58b9147a490952036544aaae5 233 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 12 233 49.309 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 WS_RS01675 c4c1dceb4493bbf77e2ea5a8b18c44af 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 20 97 2.3E-32 T 11-11-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 WS_RS01675 c4c1dceb4493bbf77e2ea5a8b18c44af 102 Gene3D G3DSA:3.30.1390.10 6 101 1.3E-35 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like WS_RS01675 c4c1dceb4493bbf77e2ea5a8b18c44af 102 SUPERFAMILY SSF54736 19 101 3.4E-28 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like WS_RS01675 c4c1dceb4493bbf77e2ea5a8b18c44af 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 3 97 25.694 T 11-11-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 SUPERFAMILY SSF53706 567 670 3.8E-138 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 SUPERFAMILY SSF53706 47 521 3.8E-138 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Gene3D G3DSA:3.40.228.10 177 362 7.0E-56 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 SUPERFAMILY SSF50692 639 801 3.62E-29 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Gene3D G3DSA:3.40.50.740 363 567 1.1E-51 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Gene3D G3DSA:3.40.50.740 103 176 1.1E-51 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Gene3D G3DSA:3.40.50.740 640 650 1.1E-51 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Gene3D G3DSA:2.20.25.90 40 102 2.2E-17 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Gene3D G3DSA:2.40.40.20 664 801 3.1E-32 T 11-11-2016 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Pfam PF01568 Molydopterin dinucleotide binding domain 679 794 3.1E-18 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 SMART SM00926 44 98 2.0E-10 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 45 97 9.8E-9 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 Pfam PF00384 Molybdopterin oxidoreductase 101 517 5.4E-64 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03435 91e87c63c8c4df5774f513ed160b64aa 801 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 461 478 - T 11-11-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 213 368 30.435 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 Gene3D G3DSA:3.90.550.10 3 204 3.9E-49 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 95 102 - T 11-11-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 369 37.013 T 11-11-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 Gene3D G3DSA:3.30.1330.50 216 367 9.2E-59 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 202 6.9E-27 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 SUPERFAMILY SSF69765 216 371 6.41E-56 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 Pfam PF02542 YgbB family 216 366 6.3E-55 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 216 366 3.8E-52 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 SUPERFAMILY SSF53448 4 204 5.12E-37 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09120 39d7f5623884e0573048c425a531a1ed 379 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 247 262 - T 11-11-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 WS_RS04120 2af92b2739781de82a0290c25fd334bc 290 SUPERFAMILY SSF103481 44 145 3.92E-11 T 11-11-2016 WS_RS04120 2af92b2739781de82a0290c25fd334bc 290 Pfam PF00892 EamA-like transporter family 6 141 6.0E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS04120 2af92b2739781de82a0290c25fd334bc 290 Pfam PF00892 EamA-like transporter family 155 281 1.1E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS04120 2af92b2739781de82a0290c25fd334bc 290 SUPERFAMILY SSF103481 190 289 1.44E-11 T 11-11-2016 WS_RS08245 ed684471c8dcb3b1a4d566becce217dc 145 Hamap MF_02110 UPF0763 protein . 3 141 23.724 T 11-11-2016 IPR019724 Uncharacterised protein family UPF0763 WS_RS08245 ed684471c8dcb3b1a4d566becce217dc 145 Pfam PF10788 Protein of unknown function (DUF2603) 2 132 1.4E-45 T 11-11-2016 IPR019724 Uncharacterised protein family UPF0763 WS_RS06390 c82076b4ea86e0ce0442fd822056b4fc 474 Gene3D G3DSA:1.10.287.950 170 358 8.3E-46 T 11-11-2016 WS_RS06390 c82076b4ea86e0ce0442fd822056b4fc 474 SMART SM00283 146 372 1.1E-22 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS06390 c82076b4ea86e0ce0442fd822056b4fc 474 Pfam PF13682 Chemoreceptor zinc-binding domain 368 432 2.5E-11 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain WS_RS06390 c82076b4ea86e0ce0442fd822056b4fc 474 SUPERFAMILY SSF58104 89 112 2.62E-51 T 11-11-2016 WS_RS06390 c82076b4ea86e0ce0442fd822056b4fc 474 SUPERFAMILY SSF58104 154 366 2.62E-51 T 11-11-2016 WS_RS06390 c82076b4ea86e0ce0442fd822056b4fc 474 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 219 357 2.9E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS01845 b45e7b7c45955cde8ab5d952d180989a 429 PIRSF PIRSF006066 1 429 2.9E-69 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 WS_RS01845 b45e7b7c45955cde8ab5d952d180989a 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 425 2.9E-88 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit WS_RS01845 b45e7b7c45955cde8ab5d952d180989a 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 428 3.0E-96 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 Gene3D G3DSA:3.40.50.620 180 229 1.2E-48 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 Gene3D G3DSA:3.40.50.620 2 67 1.2E-48 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 SUPERFAMILY SSF48163 298 457 3.27E-32 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 304 4.8E-101 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 Gene3D G3DSA:3.90.800.10 68 179 1.0E-33 T 11-11-2016 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 2 458 31.459 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 Gene3D G3DSA:1.10.10.350 360 457 4.2E-19 T 11-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 4.8E-25 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 4.8E-25 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 4.8E-25 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 4.8E-25 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 4.8E-25 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 Gene3D G3DSA:1.10.1160.10 231 312 2.4E-31 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 SUPERFAMILY SSF52374 2 295 4.83E-107 T 11-11-2016 WS_RS10440 14a5620c48bfdfa3f4a9a94a39608b43 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 456 2.1E-165 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS03650 ed4c04cae918b2fdcc4c17ca42071f74 147 Gene3D G3DSA:3.40.250.10 40 127 2.1E-13 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03650 ed4c04cae918b2fdcc4c17ca42071f74 147 SUPERFAMILY SSF52821 35 128 2.47E-17 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 SUPERFAMILY SSF55785 20 137 1.13E-5 T 11-11-2016 IPR000014 PAS domain WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 Gene3D G3DSA:3.30.565.10 232 388 6.1E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 SUPERFAMILY SSF55874 231 388 1.44E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 Gene3D G3DSA:3.30.450.20 22 138 1.3E-4 T 11-11-2016 WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 4.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 333 4.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 4.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 347 4.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 SMART SM00387 274 390 1.6E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00565 6649ffa999dea869a8e5790215c97ac6 390 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 282 389 5.6E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 259 19.378 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 Pfam PF00288 GHMP kinases N terminal domain 86 142 9.4E-9 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 Gene3D G3DSA:3.30.70.890 165 253 2.2E-5 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 253 1.9E-46 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 Gene3D G3DSA:3.30.230.10 2 159 2.3E-34 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 SUPERFAMILY SSF55060 167 255 1.58E-5 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 SUPERFAMILY SSF54211 2 157 6.3E-27 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS04220 5d90a75381ced483cccd21f256d0660f 260 PIRSF PIRSF010376 1 259 5.5E-54 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 WS_RS03045 8dca2687227d5d776bfed2836a6d2e09 243 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 72 4.0E-14 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 WS_RS03045 8dca2687227d5d776bfed2836a6d2e09 243 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 WS_RS03045 8dca2687227d5d776bfed2836a6d2e09 243 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 17 176 3.6E-48 T 11-11-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 WS_RS05745 f9400ad7b260b4fd9e1b31ea58e2155e 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 157 33.045 T 11-11-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 WS_RS05745 f9400ad7b260b4fd9e1b31ea58e2155e 158 Gene3D G3DSA:3.30.70.640 2 156 8.2E-63 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 WS_RS05745 f9400ad7b260b4fd9e1b31ea58e2155e 158 Pfam PF01967 MoaC family 14 149 5.1E-51 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 WS_RS05745 f9400ad7b260b4fd9e1b31ea58e2155e 158 SUPERFAMILY SSF55040 11 154 3.79E-56 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 WS_RS05745 f9400ad7b260b4fd9e1b31ea58e2155e 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 5.9E-53 T 11-11-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 WS_RS07645 1897e3aab3205707d7a75f45f59bc854 287 Pfam PF01513 ATP-NAD kinase 63 268 3.4E-47 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 WS_RS07645 1897e3aab3205707d7a75f45f59bc854 287 SUPERFAMILY SSF111331 9 285 5.89E-79 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain WS_RS07645 1897e3aab3205707d7a75f45f59bc854 287 Gene3D G3DSA:2.60.200.30 149 259 4.4E-39 T 11-11-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 WS_RS07645 1897e3aab3205707d7a75f45f59bc854 287 Hamap MF_00361 NAD kinase [nadK]. 8 284 32.091 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 WS_RS07645 1897e3aab3205707d7a75f45f59bc854 287 Gene3D G3DSA:3.40.50.10330 6 148 3.7E-28 T 11-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 Pfam PF00005 ABC transporter 345 484 1.6E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 Pfam PF00005 ABC transporter 21 170 3.7E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 Gene3D G3DSA:3.40.50.300 328 542 1.2E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 221 304 3.8E-24 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 SMART SM00382 354 532 1.5E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 SMART SM00382 30 218 5.3E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 Gene3D G3DSA:3.40.50.300 2 245 3.3E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 SUPERFAMILY SSF52540 18 221 4.62E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05545 efd2bb121a167fc5769cb8a2d4bedba5 548 SUPERFAMILY SSF52540 329 542 1.17E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 Gene3D G3DSA:3.30.750.44 63 104 1.2E-6 T 11-11-2016 WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 378 7.5E-110 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 SMART SM00245 172 360 4.4E-73 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 Gene3D G3DSA:2.30.42.10 105 181 1.4E-27 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 SUPERFAMILY SSF52096 192 364 3.48E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 SUPERFAMILY SSF52096 39 117 3.48E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 SUPERFAMILY SSF50156 71 195 4.26E-24 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 Pfam PF13180 PDZ domain 100 177 3.8E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 Gene3D G3DSA:3.90.226.10 182 377 5.8E-62 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 Pfam PF03572 Peptidase family S41 200 358 2.9E-53 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 WS_RS02970 e028620dfa46f25b7cb30096a22a77ae 439 SMART SM00228 99 170 1.4E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 Pfam PF00391 PEP-utilising enzyme, mobile domain 395 466 1.5E-23 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 Gene3D G3DSA:3.30.1490.20 1 193 1.8E-69 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 Gene3D G3DSA:3.30.470.20 195 349 7.9E-53 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 489 799 3.0E-60 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 760 772 3.1E-6 T 11-11-2016 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 724 739 3.1E-6 T 11-11-2016 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 707 722 3.1E-6 T 11-11-2016 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 PIRSF PIRSF000854 1 806 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 SUPERFAMILY SSF52009 357 477 3.79E-30 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 707 725 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 Gene3D G3DSA:3.50.30.10 384 481 2.1E-31 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 Gene3D G3DSA:3.20.20.60 491 802 1.5E-99 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 SUPERFAMILY SSF51621 479 804 9.42E-95 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 803 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 350 2.4E-119 T 11-11-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 425 436 - T 11-11-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 WS_RS03965 5d8e89284abbd4ea903be9895a6838b1 807 SUPERFAMILY SSF56059 1 394 6.0E-103 T 11-11-2016 WS_RS05240 aeff1d9ed9dc9232f50e09f65b74146f 603 SUPERFAMILY SSF52540 354 580 7.52E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05240 aeff1d9ed9dc9232f50e09f65b74146f 603 SUPERFAMILY SSF52540 124 323 7.52E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05240 aeff1d9ed9dc9232f50e09f65b74146f 603 Gene3D G3DSA:3.40.50.300 395 590 1.5E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05240 aeff1d9ed9dc9232f50e09f65b74146f 603 Gene3D G3DSA:3.40.50.300 128 235 1.5E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05240 aeff1d9ed9dc9232f50e09f65b74146f 603 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 135 592 2.0E-61 T 11-11-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 WS_RS07825 01186e4c3cd8c13ea7f27bf08cef2c8a 288 SUPERFAMILY SSF160240 205 287 1.01E-19 T 11-11-2016 WS_RS07825 01186e4c3cd8c13ea7f27bf08cef2c8a 288 Gene3D G3DSA:3.30.70.1350 203 287 5.3E-23 T 11-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain WS_RS07825 01186e4c3cd8c13ea7f27bf08cef2c8a 288 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 285 7.1E-71 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 WS_RS07825 01186e4c3cd8c13ea7f27bf08cef2c8a 288 Gene3D G3DSA:1.20.1510.10 5 202 2.5E-44 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain WS_RS07825 01186e4c3cd8c13ea7f27bf08cef2c8a 288 Pfam PF01545 Cation efflux family 9 202 2.3E-43 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 WS_RS07825 01186e4c3cd8c13ea7f27bf08cef2c8a 288 SUPERFAMILY SSF161111 4 203 1.19E-51 T 11-11-2016 WS_RS07825 01186e4c3cd8c13ea7f27bf08cef2c8a 288 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 284 2.6E-21 T 11-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 SUPERFAMILY SSF52374 4 327 2.61E-98 T 11-11-2016 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 8.6E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 8.6E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 8.6E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 8.6E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 Gene3D G3DSA:1.10.240.10 206 322 9.7E-20 T 11-11-2016 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 Pfam PF00579 tRNA synthetases class I (W and Y) 5 282 2.8E-79 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 327 1.7E-114 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 328 40.804 T 11-11-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 WS_RS01530 10cab33c0ecd823365e60983f44e72f0 328 Gene3D G3DSA:3.40.50.620 4 205 2.3E-86 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS08940 b48a04923450babbbc584a67c28d7be2 333 Gene3D G3DSA:3.40.50.620 1 192 4.4E-39 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS08940 b48a04923450babbbc584a67c28d7be2 333 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 2 143 7.2E-9 T 11-11-2016 IPR020536 Thil, AANH domain GO:0004810 WS_RS08940 b48a04923450babbbc584a67c28d7be2 333 SUPERFAMILY SSF52402 1 214 3.53E-29 T 11-11-2016 WS_RS01000 7dcedefc29be89ec88f832f4f822d790 353 Gene3D G3DSA:3.30.70.20 11 64 9.6E-8 T 11-11-2016 WS_RS01000 7dcedefc29be89ec88f832f4f822d790 353 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS01000 7dcedefc29be89ec88f832f4f822d790 353 Pfam PF02754 Cysteine-rich domain 226 305 9.8E-5 T 11-11-2016 IPR004017 Cysteine-rich domain WS_RS01000 7dcedefc29be89ec88f832f4f822d790 353 Pfam PF02754 Cysteine-rich domain 111 192 8.5E-10 T 11-11-2016 IPR004017 Cysteine-rich domain WS_RS01000 7dcedefc29be89ec88f832f4f822d790 353 Pfam PF13534 4Fe-4S dicluster domain 12 65 6.0E-7 T 11-11-2016 WS_RS01000 7dcedefc29be89ec88f832f4f822d790 353 SUPERFAMILY SSF46548 10 77 3.14E-11 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 Gene3D G3DSA:3.40.50.1980 27 224 3.1E-76 T 11-11-2016 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 SUPERFAMILY SSF53720 27 424 1.96E-80 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 Pfam PF00815 Histidinol dehydrogenase 21 428 6.5E-168 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 3.1E-162 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 3.8E-82 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.418 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 11-11-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 Gene3D G3DSA:3.40.50.1980 225 374 2.1E-66 T 11-11-2016 WS_RS07495 c67b641684570395bfeeb6242d590b6d 429 PIRSF PIRSF000099 2 429 1.7E-170 T 11-11-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 PIRSF PIRSF005900 1 145 1.3E-43 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 SUPERFAMILY SSF47240 2 145 1.35E-40 T 11-11-2016 IPR009078 Ferritin-like superfamily WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 Pfam PF00210 Ferritin-like domain 5 145 4.8E-24 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 Gene3D G3DSA:1.20.1260.10 2 145 1.6E-48 T 11-11-2016 IPR012347 Ferritin-related WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 ProSitePatterns PS00818 Dps protein family signature 1. 26 42 - T 11-11-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 8.1E-13 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 8.1E-13 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 26 42 8.1E-13 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 WS_RS07505 5f8544bd917bb55237ac9a1846bfbc09 145 ProSitePatterns PS00819 Dps protein family signature 2. 52 66 - T 11-11-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 WS_RS10575 2ab34bacca441ba36655bd6904adb8fc 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 398 1.4E-46 T 11-11-2016 IPR000160 GGDEF domain WS_RS10575 2ab34bacca441ba36655bd6904adb8fc 407 SMART SM00267 226 402 5.3E-58 T 11-11-2016 IPR000160 GGDEF domain WS_RS10575 2ab34bacca441ba36655bd6904adb8fc 407 Gene3D G3DSA:3.30.70.270 240 403 4.3E-48 T 11-11-2016 WS_RS10575 2ab34bacca441ba36655bd6904adb8fc 407 SUPERFAMILY SSF55073 242 402 3.4E-45 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10575 2ab34bacca441ba36655bd6904adb8fc 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 400 1.7E-49 T 11-11-2016 IPR000160 GGDEF domain WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 511 4.6E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Pfam PF00072 Response regulator receiver domain 674 787 7.6E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SUPERFAMILY SSF47384 257 325 5.49E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SMART SM00387 369 512 3.3E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SUPERFAMILY SSF50341 511 643 1.19E-31 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SMART SM00260 504 643 5.3E-43 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SUPERFAMILY SSF52172 670 792 5.55E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Pfam PF01627 Hpt domain 6 106 8.0E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SMART SM01231 256 324 2.3E-18 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Pfam PF01584 CheW-like domain 516 645 6.7E-24 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 257 324 1.7E-18 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SUPERFAMILY SSF47226 4 128 1.44E-31 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SMART SM00448 672 787 1.4E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SMART SM00073 4 101 3.0E-33 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Gene3D G3DSA:2.30.30.40 512 533 2.5E-23 T 11-11-2016 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Gene3D G3DSA:2.30.30.40 599 642 2.5E-23 T 11-11-2016 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Gene3D G3DSA:2.40.50.180 536 598 1.7E-14 T 11-11-2016 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Gene3D G3DSA:3.30.565.10 326 511 2.8E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 509 9.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 9.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 9.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Gene3D G3DSA:3.40.50.2300 673 791 5.6E-35 T 11-11-2016 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 SUPERFAMILY SSF55874 326 510 1.26E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Gene3D G3DSA:1.20.120.160 2 134 5.1E-41 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS09825 399e62f784f9ffbe7cb12dcd49a657bc 801 Gene3D G3DSA:1.10.287.560 256 325 2.2E-19 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 SUPERFAMILY SSF52413 298 415 1.57E-32 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 176 1.5E-33 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 PIRSF PIRSF500136 1 419 1.3E-152 T 11-11-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 Gene3D G3DSA:3.40.50.720 2 218 8.0E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 PIRSF PIRSF000124 1 418 3.7E-56 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 SUPERFAMILY SSF51735 2 187 3.24E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 SMART SM00984 313 412 1.6E-36 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 Gene3D G3DSA:3.40.50.720 228 415 3.1E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 407 3.9E-120 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 286 1.3E-23 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 412 7.0E-25 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 WS_RS00255 789e343258bb3018dee2c7a875bc426e 419 SUPERFAMILY SSF48179 197 288 3.06E-25 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1003 1111 5.6E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Gene3D G3DSA:3.30.450.20 743 867 5.6E-15 T 11-11-2016 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SUPERFAMILY SSF55785 349 470 6.93E-19 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Pfam PF13188 PAS domain 767 819 2.0E-7 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Pfam PF13426 PAS domain 366 471 5.9E-12 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00387 1001 1113 2.1E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Pfam PF14827 Double sensory domain of two-component sensor kinase 100 308 2.2E-6 T 11-11-2016 IPR029150 Double Cache domain 3 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Gene3D G3DSA:3.30.565.10 962 1111 1.4E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Pfam PF08447 PAS fold 640 728 5.1E-18 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Pfam PF08447 PAS fold 515 597 3.9E-7 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00091 355 421 1.4E-8 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00091 617 685 1.5 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00091 487 559 4.3 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00091 765 831 4.9E-7 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SUPERFAMILY SSF55785 732 867 1.77E-14 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1097 1110 6.0E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1061 1071 6.0E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1073 1091 6.0E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1042 1056 6.0E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Gene3D G3DSA:3.30.450.20 352 470 1.9E-21 T 11-11-2016 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SUPERFAMILY SSF55785 513 614 3.06E-14 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Gene3D G3DSA:3.30.450.20 490 601 9.0E-14 T 11-11-2016 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SUPERFAMILY SSF47384 884 959 4.9E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 477 4.0E-19 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 762 875 1.9E-13 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 513 612 2.6E-9 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 613 742 2.8E-12 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00086 692 735 1.3E-5 T 11-11-2016 IPR001610 PAC motif WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00086 565 605 0.014 T 11-11-2016 IPR001610 PAC motif WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00086 431 472 25.0 T 11-11-2016 IPR001610 PAC motif WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SMART SM00086 829 869 390.0 T 11-11-2016 IPR001610 PAC motif WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SUPERFAMILY SSF55785 602 733 1.61E-19 T 11-11-2016 IPR000014 PAS domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 SUPERFAMILY SSF55874 962 1111 1.09E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10655 1849e30b2d8e01fc06712bccb6b72707 1116 Gene3D G3DSA:3.30.450.20 602 742 2.1E-34 T 11-11-2016 WS_RS09465 4027c5d741f614fbefd3d185a947ac44 201 Gene3D G3DSA:2.160.20.70 96 200 9.2E-17 T 11-11-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 WS_RS09465 4027c5d741f614fbefd3d185a947ac44 201 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 152 4.6E-11 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 WS_RS09465 4027c5d741f614fbefd3d185a947ac44 201 SUPERFAMILY SSF63848 105 200 4.84E-16 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 WS_RS01415 e90a6c81ba1fd02ed61893dac3bb0dec 688 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 688 2.6E-91 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 WS_RS01415 e90a6c81ba1fd02ed61893dac3bb0dec 688 Gene3D G3DSA:2.40.170.20 174 688 5.1E-129 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS01415 e90a6c81ba1fd02ed61893dac3bb0dec 688 SUPERFAMILY SSF56935 56 688 2.43E-115 T 11-11-2016 WS_RS01415 e90a6c81ba1fd02ed61893dac3bb0dec 688 Gene3D G3DSA:2.170.130.10 46 166 3.3E-25 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS01415 e90a6c81ba1fd02ed61893dac3bb0dec 688 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 159 1.3E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS01415 e90a6c81ba1fd02ed61893dac3bb0dec 688 Pfam PF00593 TonB dependent receptor 459 686 1.4E-31 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS07790 a5886d314ade7681d0c5e02959180d49 208 Gene3D G3DSA:3.40.50.2020 3 208 1.0E-82 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS07790 a5886d314ade7681d0c5e02959180d49 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 6.9E-89 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 WS_RS07790 a5886d314ade7681d0c5e02959180d49 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.6E-75 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS07790 a5886d314ade7681d0c5e02959180d49 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 46.114 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 WS_RS07790 a5886d314ade7681d0c5e02959180d49 208 SUPERFAMILY SSF53271 3 206 1.26E-67 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS00215 e6545d16236630dd72585b3f87c0f8d8 382 SUPERFAMILY SSF53756 7 379 1.36E-55 T 11-11-2016 WS_RS00215 e6545d16236630dd72585b3f87c0f8d8 382 Pfam PF13439 Glycosyltransferase Family 4 16 183 7.6E-12 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS00215 e6545d16236630dd72585b3f87c0f8d8 382 Gene3D G3DSA:3.40.50.2000 169 352 2.6E-16 T 11-11-2016 WS_RS00215 e6545d16236630dd72585b3f87c0f8d8 382 Pfam PF00534 Glycosyl transferases group 1 195 352 1.5E-28 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 SMART SM00917 370 503 7.8E-32 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 500 1.3E-210 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 512 41.893 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 Pfam PF00682 HMGL-like 6 273 3.0E-100 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 SUPERFAMILY SSF110921 415 501 1.96E-17 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 502 3.0E-28 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 SUPERFAMILY SSF51569 6 291 8.24E-97 T 11-11-2016 WS_RS03050 42f1712a514f717dd2603472c4e61902 519 Gene3D G3DSA:3.20.20.70 4 348 9.2E-145 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 1.6E-109 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 SUPERFAMILY SSF52096 11 191 4.04E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 7.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 7.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 7.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 7.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 7.4E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-11-2016 IPR018215 ClpP, Ser active site WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-11-2016 IPR033135 ClpP, histidine active site WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.088 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 Gene3D G3DSA:3.90.226.10 4 192 3.9E-89 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS10410 748f4d97d82143e877c6eeb1bafdba3d 195 Pfam PF00574 Clp protease 13 192 3.1E-87 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 Gene3D G3DSA:3.40.1110.10 425 536 1.9E-15 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 Pfam PF00122 E1-E2 ATPase 187 399 1.4E-44 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 266 280 2.8E-24 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 645 2.8E-24 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 567 2.8E-24 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 629 2.8E-24 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 408 422 2.8E-24 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 545 2.8E-24 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 Gene3D G3DSA:2.70.150.10 195 316 3.0E-20 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 Pfam PF00702 haloacid dehalogenase-like hydrolase 405 623 1.2E-35 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 410 416 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 ProSitePatterns PS01229 Hypothetical cof family signature 2. 610 632 - T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 186 686 2.3E-72 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 SUPERFAMILY SSF81653 230 315 5.49E-21 T 11-11-2016 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 164 710 3.1E-147 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 SUPERFAMILY SSF56784 466 710 4.18E-47 T 11-11-2016 IPR023214 HAD-like domain WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 SUPERFAMILY SSF56784 406 426 4.18E-47 T 11-11-2016 IPR023214 HAD-like domain WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 666 9.9E-8 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 610 626 9.9E-8 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 582 598 9.9E-8 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 Gene3D G3DSA:3.40.50.1000 382 424 8.6E-43 T 11-11-2016 IPR023214 HAD-like domain WS_RS07420 5b7c72555b4683101b5d6eb18793237e 721 Gene3D G3DSA:3.40.50.1000 537 677 8.6E-43 T 11-11-2016 IPR023214 HAD-like domain WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 PIRSF PIRSF000349 3 232 8.8E-84 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 Gene3D G3DSA:1.10.287.990 47 113 7.9E-28 T 11-11-2016 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 121 225 1.4E-41 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 193 200 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 SUPERFAMILY SSF46609 23 114 3.67E-35 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 30 113 5.8E-31 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 SUPERFAMILY SSF54719 117 231 1.01E-44 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 PRINTS PR01703 Manganese superoxide dismutase signature 191 203 2.4E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 PRINTS PR01703 Manganese superoxide dismutase signature 54 67 2.4E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 PRINTS PR01703 Manganese superoxide dismutase signature 33 44 2.4E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 PRINTS PR01703 Manganese superoxide dismutase signature 96 109 2.4E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS08680 10a09b8c6017d1d783bdf81daf879c61 232 PRINTS PR01703 Manganese superoxide dismutase signature 150 158 2.4E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS04880 6173cca1f8215f38f717cb0b35387e1e 397 Pfam PF07690 Major Facilitator Superfamily 19 358 6.6E-45 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 WS_RS04880 6173cca1f8215f38f717cb0b35387e1e 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 392 1.7E-98 T 11-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 WS_RS04880 6173cca1f8215f38f717cb0b35387e1e 397 Gene3D G3DSA:1.20.1250.20 212 394 6.8E-6 T 11-11-2016 WS_RS04880 6173cca1f8215f38f717cb0b35387e1e 397 Gene3D G3DSA:1.20.1250.20 13 196 4.7E-28 T 11-11-2016 WS_RS04880 6173cca1f8215f38f717cb0b35387e1e 397 SUPERFAMILY SSF103473 11 393 1.12E-61 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 Gene3D G3DSA:3.40.190.10 114 211 7.6E-18 T 11-11-2016 WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 258 4.1E-63 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 SMART SM00079 36 259 2.9E-6 T 11-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 Gene3D G3DSA:3.40.190.10 33 113 2.1E-45 T 11-11-2016 WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 Gene3D G3DSA:3.40.190.10 219 258 2.1E-45 T 11-11-2016 WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 SUPERFAMILY SSF53850 1 259 8.51E-72 T 11-11-2016 WS_RS01365 7c6c8a5c1ec87c5cec7911d356e7dbc4 267 SMART SM00062 36 260 2.4E-60 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS00470 585c72942222ecb3afdbb14ebbcc393f 306 Pfam PF03547 Membrane transport protein 6 150 2.3E-14 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 Gene3D G3DSA:3.90.190.20 284 421 2.8E-44 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 280 358 3.6E-16 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 Pfam PF08245 Mur ligase middle domain 66 258 1.3E-42 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 427 27.833 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 SUPERFAMILY SSF53244 280 429 1.01E-38 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 SUPERFAMILY SSF53623 60 278 2.09E-55 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 31 427 6.1E-120 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 64 87 - T 11-11-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 WS_RS07945 c0c076f2a873fef138dc78af138d6eb7 434 Gene3D G3DSA:3.40.1190.10 60 283 1.5E-56 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS02325 10b956765233eed7c8285ab58b046c66 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 11-11-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS02325 10b956765233eed7c8285ab58b046c66 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 155 4.9E-72 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 WS_RS02325 10b956765233eed7c8285ab58b046c66 155 Gene3D G3DSA:1.10.455.10 6 155 2.2E-66 T 11-11-2016 IPR023798 Ribosomal protein S7 domain WS_RS02325 10b956765233eed7c8285ab58b046c66 155 Pfam PF00177 Ribosomal protein S7p/S5e 2 148 1.5E-64 T 11-11-2016 IPR023798 Ribosomal protein S7 domain WS_RS02325 10b956765233eed7c8285ab58b046c66 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 36.054 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 WS_RS02325 10b956765233eed7c8285ab58b046c66 155 SUPERFAMILY SSF47973 6 148 3.66E-60 T 11-11-2016 IPR023798 Ribosomal protein S7 domain WS_RS02325 10b956765233eed7c8285ab58b046c66 155 PIRSF PIRSF002122 4 155 2.2E-61 T 11-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 WS_RS04315 f4a889c868c2a4962b494cd3b9da2c08 219 SMART SM00862 145 215 2.6E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04315 f4a889c868c2a4962b494cd3b9da2c08 219 Gene3D G3DSA:3.40.50.2300 1 125 7.4E-31 T 11-11-2016 WS_RS04315 f4a889c868c2a4962b494cd3b9da2c08 219 SMART SM00448 1 112 9.9E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04315 f4a889c868c2a4962b494cd3b9da2c08 219 Gene3D G3DSA:1.10.10.10 132 215 8.9E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04315 f4a889c868c2a4962b494cd3b9da2c08 219 SUPERFAMILY SSF52172 1 180 1.85E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04315 f4a889c868c2a4962b494cd3b9da2c08 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 214 3.0E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04315 f4a889c868c2a4962b494cd3b9da2c08 219 Pfam PF00072 Response regulator receiver domain 3 112 5.3E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00685 1c3d2bb639b1b3a1df7781ebbbf63129 248 Pfam PF00731 AIR carboxylase 121 243 2.7E-14 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS00685 1c3d2bb639b1b3a1df7781ebbbf63129 248 SUPERFAMILY SSF52255 120 247 1.96E-27 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS00685 1c3d2bb639b1b3a1df7781ebbbf63129 248 SMART SM01001 119 248 2.6E-30 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS00685 1c3d2bb639b1b3a1df7781ebbbf63129 248 Gene3D G3DSA:3.40.50.7700 120 245 4.9E-22 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 430 1.9E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 4.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 4.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 4.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 SUPERFAMILY SSF55874 287 427 2.23E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 278 2.2E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 SMART SM00387 324 431 2.5E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 SUPERFAMILY SSF47384 196 278 1.75E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 Gene3D G3DSA:1.10.287.130 205 274 4.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 Gene3D G3DSA:3.30.565.10 285 427 6.0E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01500 6313fd2d4db0b349605a3b8aa067ad23 454 SMART SM00388 213 279 5.8E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 39.271 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.7E-22 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 3.7E-22 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.7E-22 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 3.7E-22 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 1.6E-54 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 156 7.0E-61 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 Gene3D G3DSA:3.30.420.10 2 156 2.7E-49 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 148 - T 11-11-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 WS_RS10500 4f6a882f8c23f3f6db4b217a66c6dc13 162 SUPERFAMILY SSF53098 2 155 2.2E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06090 e445970a9bc6f3db6f1672e0f59df700 278 Gene3D G3DSA:3.90.650.10 137 248 8.0E-12 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS06090 e445970a9bc6f3db6f1672e0f59df700 278 Pfam PF00586 AIR synthase related protein, N-terminal domain 32 129 1.9E-17 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS06090 e445970a9bc6f3db6f1672e0f59df700 278 PIRSF PIRSF005303 2 278 2.1E-75 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 WS_RS06090 e445970a9bc6f3db6f1672e0f59df700 278 SUPERFAMILY SSF56042 134 247 1.06E-11 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS06090 e445970a9bc6f3db6f1672e0f59df700 278 Gene3D G3DSA:3.30.1330.10 5 132 1.1E-30 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS06090 e445970a9bc6f3db6f1672e0f59df700 278 SUPERFAMILY SSF55326 9 129 3.66E-26 T 11-11-2016 WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 SUPERFAMILY SSF46785 8 103 4.66E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 Gene3D G3DSA:1.10.10.10 5 75 8.0E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 Gene3D G3DSA:1.20.120.530 77 215 1.1E-35 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 71 8.5E-13 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 SMART SM00895 84 206 6.9E-23 T 11-11-2016 IPR011711 GntR, C-terminal WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 SMART SM00345 16 74 5.6E-8 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 SUPERFAMILY SSF48008 79 211 4.71E-29 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal WS_RS07255 8cd3225fd3f7e79675c8af889f73a60d 223 Pfam PF07729 FCD domain 84 205 7.8E-29 T 11-11-2016 IPR011711 GntR, C-terminal WS_RS01755 ecc7d6c724d58a80ce9ebc70d0991ffb 605 Pfam PF04851 Type III restriction enzyme, res subunit 227 375 1.0E-13 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 WS_RS01755 ecc7d6c724d58a80ce9ebc70d0991ffb 605 Pfam PF00271 Helicase conserved C-terminal domain 417 527 4.5E-13 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS01755 ecc7d6c724d58a80ce9ebc70d0991ffb 605 SMART SM00490 448 527 2.5E-12 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS01755 ecc7d6c724d58a80ce9ebc70d0991ffb 605 SUPERFAMILY SSF52540 250 538 5.35E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01755 ecc7d6c724d58a80ce9ebc70d0991ffb 605 Gene3D G3DSA:3.40.50.300 401 571 6.4E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01755 ecc7d6c724d58a80ce9ebc70d0991ffb 605 SMART SM00487 224 405 9.3E-25 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain WS_RS01755 ecc7d6c724d58a80ce9ebc70d0991ffb 605 Gene3D G3DSA:3.40.50.300 220 399 5.2E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Gene3D G3DSA:1.10.150.20 181 242 1.5E-25 T 11-11-2016 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 3.4E-41 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SUPERFAMILY SSF47807 165 258 4.64E-24 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 785 796 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 832 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 774 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 653 668 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 718 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 858 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 726 751 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 675 698 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 PRINTS PR00868 DNA-polymerase family A (pol I) signature 630 652 7.5E-68 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SMART SM00474 309 490 7.1E-31 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Gene3D G3DSA:3.30.70.370 791 897 1.2E-55 T 11-11-2016 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Gene3D G3DSA:3.30.70.370 638 686 1.2E-55 T 11-11-2016 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Gene3D G3DSA:1.20.1060.10 518 637 2.7E-35 T 11-11-2016 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SUPERFAMILY SSF56672 501 897 7.67E-131 T 11-11-2016 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Pfam PF01612 3'-5' exonuclease 311 489 6.6E-28 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Gene3D G3DSA:1.10.150.20 687 790 1.1E-33 T 11-11-2016 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 ProSitePatterns PS00447 DNA polymerase family A signature. 726 745 - T 11-11-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SUPERFAMILY SSF88723 1 165 1.02E-44 T 11-11-2016 IPR029060 PIN domain-like WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Gene3D G3DSA:3.40.50.1010 3 180 5.8E-51 T 11-11-2016 IPR029060 PIN domain-like WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 TIGRFAM TIGR00593 pola: DNA polymerase I 4 898 1.6E-263 T 11-11-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Pfam PF00476 DNA polymerase family A 527 895 3.2E-130 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 256 3.3E-25 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SUPERFAMILY SSF53098 309 491 1.29E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 Gene3D G3DSA:3.30.420.10 309 517 1.4E-55 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SMART SM00475 1 257 4.6E-96 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SMART SM00279 168 203 2.5E-13 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 WS_RS02110 32102fd02519d1893ccb5dabe6001881 898 SMART SM00482 661 862 6.6E-85 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 SUPERFAMILY SSF52172 1 123 2.7E-33 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 2.1E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 Gene3D G3DSA:1.10.10.10 154 218 3.0E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 SMART SM00862 147 217 3.8E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 Gene3D G3DSA:3.40.50.2300 1 153 1.1E-31 T 11-11-2016 WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 SMART SM00448 1 112 2.2E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00060 4beeb186371e8598371cc765c2db00ff 220 SUPERFAMILY SSF46894 133 217 8.5E-13 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 Pfam PF00308 Bacterial dnaA protein 102 316 6.0E-86 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 Gene3D G3DSA:1.10.8.60 266 334 2.7E-25 T 11-11-2016 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 434 29.491 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 ProSitePatterns PS01008 DnaA protein signature. 393 412 - T 11-11-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 SUPERFAMILY SSF48295 330 435 1.12E-29 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 Gene3D G3DSA:3.40.50.300 101 264 1.2E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 433 1.2E-153 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 2.2E-41 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 135 155 2.2E-41 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 393 412 2.2E-41 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 179 2.2E-41 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 258 2.2E-41 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 SMART SM00382 134 263 1.6E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 SMART SM00760 343 412 3.9E-31 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 Pfam PF11638 DnaA N-terminal domain 6 64 2.4E-10 T 11-11-2016 IPR024633 DnaA N-terminal domain WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 345 412 1.5E-21 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 SUPERFAMILY SSF52540 103 309 3.58E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00005 7c4c046aa1820f35ec36324802f31695 437 Gene3D G3DSA:1.10.1750.10 335 435 1.5E-31 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Pfam PF08275 DNA primase catalytic core, N-terminal domain 115 236 2.2E-34 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Gene3D G3DSA:3.90.580.10 1 97 2.5E-37 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Pfam PF10410 DnaB-helicase binding domain of primase 351 403 1.0E-4 T 11-11-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Gene3D G3DSA:3.90.980.10 108 225 4.3E-31 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Pfam PF01807 CHC2 zinc finger 3 97 2.1E-36 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Pfam PF13662 Toprim domain 245 316 1.9E-14 T 11-11-2016 IPR006171 Toprim domain WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 TIGRFAM TIGR01391 dnaG: DNA primase 1 399 1.4E-126 T 11-11-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 SUPERFAMILY SSF57783 1 97 1.45E-35 T 11-11-2016 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 SMART SM00400 33 87 1.6E-31 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 SMART SM00493 244 315 2.9E-16 T 11-11-2016 IPR006171 Toprim domain WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Gene3D G3DSA:3.40.1360.10 226 344 3.5E-34 T 11-11-2016 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 SUPERFAMILY SSF56731 108 403 3.58E-81 T 11-11-2016 WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Pfam PF16730 DnaG-primase C-terminal, helicase-binding domain 430 547 1.0E-39 T 11-11-2016 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain WS_RS08935 6bc6237588beae7628ce70b4209b0de6 554 Hamap MF_00974 DNA primase [dnaG]. 1 523 25.485 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 WS_RS07195 c4e0580ba75f5d4de668d03188d517c0 343 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 340 38.708 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 WS_RS07195 c4e0580ba75f5d4de668d03188d517c0 343 Pfam PF01761 3-dehydroquinate synthase 54 307 2.8E-97 T 11-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 WS_RS07195 c4e0580ba75f5d4de668d03188d517c0 343 Gene3D G3DSA:3.40.50.1970 4 158 6.1E-54 T 11-11-2016 WS_RS07195 c4e0580ba75f5d4de668d03188d517c0 343 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 336 4.7E-106 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 WS_RS07195 c4e0580ba75f5d4de668d03188d517c0 343 Gene3D G3DSA:1.20.1090.10 160 339 6.5E-58 T 11-11-2016 WS_RS07195 c4e0580ba75f5d4de668d03188d517c0 343 PIRSF PIRSF001455 11 341 2.0E-97 T 11-11-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 WS_RS07195 c4e0580ba75f5d4de668d03188d517c0 343 SUPERFAMILY SSF56796 21 339 1.28E-99 T 11-11-2016 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 77 7.5E-19 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 Gene3D G3DSA:3.40.50.620 100 417 9.6E-88 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 17 528 3.0E-135 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 114 123 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 104 119 1.6E-21 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 135 1.6E-21 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 283 304 1.6E-21 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 156 1.6E-21 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 SUPERFAMILY SSF52374 101 426 1.31E-83 T 11-11-2016 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 SMART SM01016 3 77 6.6E-26 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 Pfam PF00750 tRNA synthetases class I (R) 89 385 1.4E-13 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 SMART SM00836 414 528 5.5E-34 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 528 23.775 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 SUPERFAMILY SSF55190 8 83 1.07E-20 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 Pfam PF05746 DALR anticodon binding domain 414 528 2.7E-24 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 Gene3D G3DSA:3.30.1360.70 14 94 1.6E-25 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 Gene3D G3DSA:1.10.730.10 418 528 9.8E-27 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS00945 1eff537d58dc5032a391ea226c4e433a 528 SUPERFAMILY SSF47323 408 528 7.85E-24 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS00030 841d91b894d896dfd13d7cb6fb626313 107 SUPERFAMILY SSF55620 3 98 5.23E-16 T 11-11-2016 WS_RS00030 841d91b894d896dfd13d7cb6fb626313 107 SMART SM00905 3 105 2.5E-17 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS00030 841d91b894d896dfd13d7cb6fb626313 107 Pfam PF02152 Dihydroneopterin aldolase 4 94 2.0E-14 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS00030 841d91b894d896dfd13d7cb6fb626313 107 Gene3D G3DSA:3.30.1130.10 2 97 6.2E-16 T 11-11-2016 WS_RS00030 841d91b894d896dfd13d7cb6fb626313 107 TIGRFAM TIGR00526 folB_dom: FolB domain 4 93 2.9E-13 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 Gene3D G3DSA:3.20.20.120 127 417 9.2E-127 T 11-11-2016 IPR029065 Enolase C-terminal domain-like WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 Gene3D G3DSA:3.30.390.10 4 125 8.3E-49 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 Pfam PF03952 Enolase, N-terminal domain 4 133 2.8E-53 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 SMART SM01192 138 422 2.2E-201 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 ProSitePatterns PS00164 Enolase signature. 334 347 - T 11-11-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 419 2.0E-119 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 PIRSF PIRSF001400 1 422 4.7E-185 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 Hamap MF_00318 Enolase [eno]. 2 411 43.166 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 SUPERFAMILY SSF51604 137 416 7.64E-119 T 11-11-2016 IPR029065 Enolase C-terminal domain-like WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 SMART SM01193 4 133 5.2E-82 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 SUPERFAMILY SSF54826 4 135 1.84E-50 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 7.5E-203 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 PRINTS PR00148 Enolase signature 311 322 1.2E-40 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 PRINTS PR00148 Enolase signature 160 173 1.2E-40 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 PRINTS PR00148 Enolase signature 334 348 1.2E-40 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 PRINTS PR00148 Enolase signature 37 51 1.2E-40 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 PRINTS PR00148 Enolase signature 106 122 1.2E-40 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07105 6438788c5f144d3416a8e7fb592696d7 422 PRINTS PR00148 Enolase signature 363 380 1.2E-40 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS07910 63b7f9c7d7da3000a40fe1e0ddeeef8f 102 Pfam PF02575 YbaB/EbfC DNA-binding family 11 95 2.7E-22 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family WS_RS07910 63b7f9c7d7da3000a40fe1e0ddeeef8f 102 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 94 17.261 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family WS_RS07910 63b7f9c7d7da3000a40fe1e0ddeeef8f 102 Gene3D G3DSA:3.30.1310.10 2 96 6.8E-34 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family WS_RS07910 63b7f9c7d7da3000a40fe1e0ddeeef8f 102 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 95 1.6E-24 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family WS_RS07910 63b7f9c7d7da3000a40fe1e0ddeeef8f 102 PIRSF PIRSF004555 1 102 9.8E-26 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family WS_RS07910 63b7f9c7d7da3000a40fe1e0ddeeef8f 102 SUPERFAMILY SSF82607 6 94 3.14E-22 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family WS_RS00500 05b574a0f7c373c328d864cce0baacb7 262 SUPERFAMILY SSF63892 2 259 1.96E-84 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 WS_RS00500 05b574a0f7c373c328d864cce0baacb7 262 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 262 96.599 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 WS_RS00500 05b574a0f7c373c328d864cce0baacb7 262 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 257 1.4E-92 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 WS_RS00500 05b574a0f7c373c328d864cce0baacb7 262 Gene3D G3DSA:3.20.20.70 1 259 1.1E-94 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS00500 05b574a0f7c373c328d864cce0baacb7 262 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 258 1.4E-88 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 Pfam PF00773 RNB domain 215 534 1.7E-95 T 11-11-2016 WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 50 591 5.5E-115 T 11-11-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 SMART SM00955 215 535 6.7E-132 T 11-11-2016 WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 ProSitePatterns PS01175 Ribonuclease II family signature. 502 526 - T 11-11-2016 IPR022966 Ribonuclease II/R, conserved site WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 SMART SM00357 49 109 2.8E-4 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 SUPERFAMILY SSF50249 176 576 8.57E-110 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 Pfam PF08206 Ribonuclease B OB domain 50 108 6.1E-7 T 11-11-2016 IPR013223 Ribonuclease B, N-terminal OB domain WS_RS08805 f7c009e22bafbea8f01445cb76b167ba 653 SUPERFAMILY SSF50249 46 110 1.4E-9 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 209 231 - T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 Gene3D G3DSA:3.40.50.720 6 147 1.9E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 SUPERFAMILY SSF48179 150 252 7.31E-29 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 SUPERFAMILY SSF51735 5 148 4.73E-14 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 253 22.79 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 PIRSF PIRSF000193 3 253 4.5E-57 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 151 253 7.8E-34 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 Gene3D G3DSA:1.10.3730.10 150 252 1.8E-33 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 WS_RS09285 b71851047893c4bfdf7551bdcc94d01e 253 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 253 6.9E-65 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 Gene3D G3DSA:3.40.640.10 55 311 8.0E-65 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 Pfam PF00202 Aminotransferase class-III 18 409 5.2E-85 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 SUPERFAMILY SSF53383 7 411 2.62E-107 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 Gene3D G3DSA:3.90.1150.10 11 54 5.5E-30 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 Gene3D G3DSA:3.90.1150.10 315 411 5.5E-30 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 232 269 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 3 410 9.2E-202 T 11-11-2016 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761 WS_RS04100 170bc2f89c3b672b458e64a18d4db389 427 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 3 415 3.9E-146 T 11-11-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761 WS_RS10475 c07dc6b84c8ae7d16f17680d6ba13125 354 Gene3D G3DSA:2.30.42.10 89 186 3.2E-20 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10475 c07dc6b84c8ae7d16f17680d6ba13125 354 Pfam PF02163 Peptidase family M50 7 335 1.7E-74 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 WS_RS10475 c07dc6b84c8ae7d16f17680d6ba13125 354 SMART SM00228 110 179 1.7E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10475 c07dc6b84c8ae7d16f17680d6ba13125 354 Pfam PF13180 PDZ domain 125 184 7.9E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10475 c07dc6b84c8ae7d16f17680d6ba13125 354 SUPERFAMILY SSF50156 82 186 9.46E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10475 c07dc6b84c8ae7d16f17680d6ba13125 354 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 131 348 1.5E-46 T 11-11-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 WS_RS08800 1ffdbfd539f46af5255f796905e9ca7f 332 SUPERFAMILY SSF52540 9 194 5.31E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08800 1ffdbfd539f46af5255f796905e9ca7f 332 Gene3D G3DSA:3.40.50.300 14 121 4.1E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01375 429d4044e781edc39d4ff8338aac5e57 321 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 115 209 1.0E-26 T 11-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 WS_RS01375 429d4044e781edc39d4ff8338aac5e57 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 315 2.2E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS01375 429d4044e781edc39d4ff8338aac5e57 321 SUPERFAMILY SSF161098 115 303 2.22E-46 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS01375 429d4044e781edc39d4ff8338aac5e57 321 Gene3D G3DSA:1.10.3720.10 114 316 9.5E-52 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS09800 b9dbcaf8eb9906f0c2a02a796cd36acf 192 SUPERFAMILY SSF53178 1 169 1.83E-57 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 WS_RS09800 b9dbcaf8eb9906f0c2a02a796cd36acf 192 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 102 112 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 WS_RS09800 b9dbcaf8eb9906f0c2a02a796cd36acf 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 173 34.242 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 WS_RS09800 b9dbcaf8eb9906f0c2a02a796cd36acf 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 172 2.0E-55 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 WS_RS09800 b9dbcaf8eb9906f0c2a02a796cd36acf 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 WS_RS09800 b9dbcaf8eb9906f0c2a02a796cd36acf 192 Gene3D G3DSA:3.40.50.1470 1 173 6.9E-60 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 WS_RS09800 b9dbcaf8eb9906f0c2a02a796cd36acf 192 Pfam PF01195 Peptidyl-tRNA hydrolase 3 171 1.3E-54 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 Gene3D G3DSA:3.40.50.720 1 34 6.8E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 158 179 - T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 39 130 6.6E-20 T 11-11-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 150 287 5.3E-45 T 11-11-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 Gene3D G3DSA:1.10.1040.10 154 295 5.0E-49 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 291 31.255 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 SUPERFAMILY SSF51735 1 145 1.05E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 Gene3D G3DSA:3.40.50.720 39 153 2.6E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 SUPERFAMILY SSF48179 149 295 6.29E-48 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 WS_RS09425 8a7d091283aad0dd72e3f0cb0cd5c0af 297 PIRSF PIRSF000114 34 297 2.0E-71 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 Pfam PF00231 ATP synthase 4 296 3.7E-81 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 Gene3D G3DSA:1.10.287.80 210 245 1.8E-25 T 11-11-2016 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 Gene3D G3DSA:1.10.287.80 20 61 1.8E-25 T 11-11-2016 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 SUPERFAMILY SSF52943 4 296 1.23E-79 T 11-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 PRINTS PR00126 ATP synthase gamma subunit signature 175 192 7.5E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 PRINTS PR00126 ATP synthase gamma subunit signature 82 101 7.5E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 PRINTS PR00126 ATP synthase gamma subunit signature 275 296 7.5E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 PRINTS PR00126 ATP synthase gamma subunit signature 244 263 7.5E-30 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 Gene3D G3DSA:1.10.287.80 246 290 1.9E-25 T 11-11-2016 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 Gene3D G3DSA:3.40.1380.10 78 201 3.2E-36 T 11-11-2016 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 296 3.0E-94 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02535 fecdc157f6e1a8379cf45de6ed041f4f 298 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 297 31.404 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS01435 08dda47321867ba9578fcaebcaa06ea4 255 Gene3D G3DSA:3.30.1330.60 110 236 5.9E-28 T 11-11-2016 IPR006665 OmpA-like domain WS_RS01435 08dda47321867ba9578fcaebcaa06ea4 255 Pfam PF00691 OmpA family 129 231 7.6E-18 T 11-11-2016 IPR006665 OmpA-like domain WS_RS01435 08dda47321867ba9578fcaebcaa06ea4 255 SUPERFAMILY SSF103088 117 237 2.22E-25 T 11-11-2016 IPR006665 OmpA-like domain WS_RS01435 08dda47321867ba9578fcaebcaa06ea4 255 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 6.9E-15 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 Gene3D G3DSA:3.40.50.620 7 163 2.3E-66 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 395 1.9E-147 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 Gene3D G3DSA:3.90.1260.10 164 361 1.3E-97 T 11-11-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 SUPERFAMILY SSF69864 177 401 1.44E-94 T 11-11-2016 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 Pfam PF00764 Arginosuccinate synthase 9 395 1.1E-157 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 SUPERFAMILY SSF52402 6 210 2.43E-49 T 11-11-2016 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 Gene3D G3DSA:1.20.5.470 373 394 8.0E-5 T 11-11-2016 WS_RS10195 5278f5df40df592589b34c38cce9f4dd 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 403 52.715 T 11-11-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS10170 5425e624e5c7c9954aead4e17b8f558f 316 ProSitePatterns PS00534 Ferrochelatase signature. 183 201 - T 11-11-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 WS_RS10170 5425e624e5c7c9954aead4e17b8f558f 316 SUPERFAMILY SSF53800 2 312 1.64E-79 T 11-11-2016 WS_RS10170 5425e624e5c7c9954aead4e17b8f558f 316 Hamap MF_00323 Ferrochelatase [hemH]. 1 314 29.99 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 WS_RS10170 5425e624e5c7c9954aead4e17b8f558f 316 TIGRFAM TIGR00109 hemH: ferrochelatase 2 311 4.6E-92 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 WS_RS10170 5425e624e5c7c9954aead4e17b8f558f 316 Gene3D G3DSA:3.40.50.1400 193 311 1.8E-29 T 11-11-2016 WS_RS10170 5425e624e5c7c9954aead4e17b8f558f 316 Pfam PF00762 Ferrochelatase 2 312 1.1E-88 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 WS_RS10170 5425e624e5c7c9954aead4e17b8f558f 316 Gene3D G3DSA:3.40.50.1400 2 192 2.8E-51 T 11-11-2016 WS_RS06575 9494d333ba97d225411ca789e0e11303 220 SUPERFAMILY SSF116726 152 215 8.63E-12 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS06575 9494d333ba97d225411ca789e0e11303 220 Pfam PF02254 TrkA-N domain 6 121 7.7E-24 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 WS_RS06575 9494d333ba97d225411ca789e0e11303 220 Gene3D G3DSA:3.40.50.720 3 133 6.7E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06575 9494d333ba97d225411ca789e0e11303 220 Gene3D G3DSA:3.30.70.1450 153 214 4.5E-12 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS06575 9494d333ba97d225411ca789e0e11303 220 SUPERFAMILY SSF51735 5 131 1.78E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06575 9494d333ba97d225411ca789e0e11303 220 Pfam PF02080 TrkA-C domain 155 212 5.9E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS04735 a1b6c31d675d0511f45bc3e6f1f78dc9 547 Gene3D G3DSA:3.40.190.10 170 306 8.2E-36 T 11-11-2016 WS_RS04735 a1b6c31d675d0511f45bc3e6f1f78dc9 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 458 2.2E-82 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain WS_RS04735 a1b6c31d675d0511f45bc3e6f1f78dc9 547 Gene3D G3DSA:3.90.76.10 75 169 1.2E-22 T 11-11-2016 WS_RS04735 a1b6c31d675d0511f45bc3e6f1f78dc9 547 PIRSF PIRSF002741 3 538 9.0E-87 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 WS_RS04735 a1b6c31d675d0511f45bc3e6f1f78dc9 547 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 43 544 9.6E-181 T 11-11-2016 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 WS_RS04735 a1b6c31d675d0511f45bc3e6f1f78dc9 547 Gene3D G3DSA:3.10.105.10 307 516 8.9E-47 T 11-11-2016 WS_RS04735 a1b6c31d675d0511f45bc3e6f1f78dc9 547 SUPERFAMILY SSF53850 46 535 2.53E-113 T 11-11-2016 WS_RS08910 de16da215983de06f93fbc1da3b4fdd8 449 Gene3D G3DSA:3.90.1300.10 14 446 8.4E-150 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS08910 de16da215983de06f93fbc1da3b4fdd8 449 ProSitePatterns PS00571 Amidases signature. 124 155 - T 11-11-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 WS_RS08910 de16da215983de06f93fbc1da3b4fdd8 449 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 22 446 82.016 T 11-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS08910 de16da215983de06f93fbc1da3b4fdd8 449 SUPERFAMILY SSF75304 45 445 3.66E-138 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS08910 de16da215983de06f93fbc1da3b4fdd8 449 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 28 445 1.9E-175 T 11-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS08910 de16da215983de06f93fbc1da3b4fdd8 449 Pfam PF01425 Amidase 45 435 1.3E-142 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Pfam PF00679 Elongation factor G C-terminus 399 485 8.8E-24 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 3.5E-47 T 11-11-2016 IPR013842 GTP-binding protein LepA, C-terminal WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Pfam PF00009 Elongation factor Tu GTP binding domain 2 180 7.6E-54 T 11-11-2016 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 SUPERFAMILY SSF54980 291 370 1.12E-17 T 11-11-2016 IPR009022 Elongation factor G, III-V domain WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Pfam PF03144 Elongation factor Tu domain 2 204 275 1.5E-9 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 TIGRFAM TIGR01393 lepA: elongation factor 4 2 596 1.3E-294 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.6E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.6E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.6E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.6E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 PRINTS PR00315 GTP-binding elongation factor signature 125 134 3.6E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Gene3D G3DSA:2.40.30.10 193 289 1.9E-24 T 11-11-2016 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 SUPERFAMILY SSF54980 400 494 2.3E-24 T 11-11-2016 IPR009022 Elongation factor G, III-V domain WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Gene3D G3DSA:3.30.70.870 292 369 3.1E-24 T 11-11-2016 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Hamap MF_00071 Elongation factor 4 [lepA]. 1 596 286.407 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Gene3D G3DSA:3.40.50.300 2 192 2.6E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 Gene3D G3DSA:3.30.70.240 401 489 2.2E-20 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 147 2.1E-18 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 SMART SM00838 401 492 0.0053 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS07800 ac6c5b42056095e2befc5b9992d0c429 596 SUPERFAMILY SSF52540 2 228 9.78E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06075 8e31729a4dae37b2666fe5dd10e0f912 419 Gene3D G3DSA:1.20.1600.10 31 214 1.9E-12 T 11-11-2016 WS_RS06075 8e31729a4dae37b2666fe5dd10e0f912 419 Gene3D G3DSA:1.20.1600.10 231 415 2.7E-19 T 11-11-2016 WS_RS06075 8e31729a4dae37b2666fe5dd10e0f912 419 Pfam PF02321 Outer membrane efflux protein 231 406 7.8E-21 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS06075 8e31729a4dae37b2666fe5dd10e0f912 419 Pfam PF02321 Outer membrane efflux protein 29 205 4.6E-11 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS06075 8e31729a4dae37b2666fe5dd10e0f912 419 SUPERFAMILY SSF56954 31 410 8.37E-43 T 11-11-2016 WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 638 753 1.7E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 Gene3D G3DSA:3.30.565.10 54 232 9.7E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 SUPERFAMILY SSF55874 42 237 1.02E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 731 2.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 686 2.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 738 751 2.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 Gene3D G3DSA:3.30.565.10 579 752 2.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 60 197 7.5E-28 T 11-11-2016 WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 SUPERFAMILY SSF55874 585 752 7.99E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09060 410faca90d5bda793105b9785cc3bcb0 761 SMART SM00387 631 754 4.5E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03625 8841a19651bf326cf6fdc48d50b94d7f 312 Pfam PF03773 Predicted permease 21 309 6.2E-66 T 11-11-2016 IPR005524 Predicted permease DUF318 WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 SUPERFAMILY SSF52317 295 546 3.52E-74 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 TIGRFAM TIGR00337 PyrG: CTP synthase 10 540 8.9E-238 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 Gene3D G3DSA:3.40.50.880 294 546 1.5E-90 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 Pfam PF06418 CTP synthase N-terminus 11 273 4.8E-116 T 11-11-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 SUPERFAMILY SSF52540 10 277 1.06E-113 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 Pfam PF00117 Glutamine amidotransferase class-I 308 540 1.4E-54 T 11-11-2016 IPR017926 Glutamine amidotransferase WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 Gene3D G3DSA:3.40.50.300 4 290 1.7E-124 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01120 2eb44e6f34977e1a9a34a0818aa80fc3 552 Hamap MF_01227 CTP synthase [pyrG]. 10 546 49.592 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 WS_RS10685 e2108bd4077be79e2a6fcef6d8cf651b 168 ProSitePatterns PS00550 Hemerythrin family signature. 60 83 - T 11-11-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 WS_RS10685 e2108bd4077be79e2a6fcef6d8cf651b 168 Gene3D G3DSA:1.20.120.50 5 132 5.5E-30 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 WS_RS10685 e2108bd4077be79e2a6fcef6d8cf651b 168 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 7 132 3.0E-35 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 WS_RS10685 e2108bd4077be79e2a6fcef6d8cf651b 168 Pfam PF01814 Hemerythrin HHE cation binding domain 17 131 2.4E-9 T 11-11-2016 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 WS_RS10685 e2108bd4077be79e2a6fcef6d8cf651b 168 SUPERFAMILY SSF47188 5 132 2.62E-28 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 WS_RS10160 cc9e074d26dd3db2b2f1ed9a478f41be 220 SUPERFAMILY SSF75217 73 218 2.55E-29 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases WS_RS10160 cc9e074d26dd3db2b2f1ed9a478f41be 220 Pfam PF04452 RNA methyltransferase 15 217 4.0E-36 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS10160 cc9e074d26dd3db2b2f1ed9a478f41be 220 Gene3D G3DSA:3.40.1280.10 1 217 1.5E-32 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal WS_RS10160 cc9e074d26dd3db2b2f1ed9a478f41be 220 PIRSF PIRSF015601 1 220 8.0E-35 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS10160 cc9e074d26dd3db2b2f1ed9a478f41be 220 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 217 1.5E-37 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00325 8a93c79dbea96effb43b3e8c08107245 79 SUPERFAMILY SSF140496 1 79 3.27E-40 T 11-11-2016 WS_RS00325 8a93c79dbea96effb43b3e8c08107245 79 Gene3D G3DSA:1.20.58.90 1 79 1.3E-40 T 11-11-2016 WS_RS00325 8a93c79dbea96effb43b3e8c08107245 79 Pfam PF10398 Protein of unknown function (DUF2443) 1 79 5.5E-43 T 11-11-2016 IPR019469 Protein of unknown function DUF2443 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 SUPERFAMILY SSF140490 44 135 3.14E-19 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 271 1.8E-13 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 383 407 1.8E-13 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 530 548 1.8E-13 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 49 129 1.1E-16 T 11-11-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Gene3D G3DSA:3.40.50.720 501 611 2.2E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Gene3D G3DSA:3.40.50.720 251 336 2.2E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 269 5.3E-13 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 332 350 5.3E-13 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 520 542 5.3E-13 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 405 5.3E-13 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 SUPERFAMILY SSF46548 601 642 4.87E-5 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 146 231 2.1E-18 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Gene3D G3DSA:1.10.1060.10 129 250 6.3E-25 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Gene3D G3DSA:1.10.1060.10 612 642 2.2E-6 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 248 555 1.3E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 Gene3D G3DSA:3.50.50.60 337 499 6.9E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 SUPERFAMILY SSF51971 247 498 7.06E-48 T 11-11-2016 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 SMART SM00928 45 92 7.5E-7 T 11-11-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02365 d10be90c0b3ee043f62f26397bbf4115 649 SUPERFAMILY SSF46548 146 258 2.09E-18 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 WS_RS10280 d95808f0cc9864d589cdcca54f961066 179 Gene3D G3DSA:3.40.50.300 7 173 5.0E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10280 d95808f0cc9864d589cdcca54f961066 179 PRINTS PR01100 Shikimate kinase family signature 106 123 4.5E-5 T 11-11-2016 WS_RS10280 d95808f0cc9864d589cdcca54f961066 179 PRINTS PR01100 Shikimate kinase family signature 13 28 4.5E-5 T 11-11-2016 WS_RS10280 d95808f0cc9864d589cdcca54f961066 179 Pfam PF01583 Adenylylsulphate kinase 9 155 2.3E-30 T 11-11-2016 WS_RS10280 d95808f0cc9864d589cdcca54f961066 179 SUPERFAMILY SSF52540 8 172 3.9E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 Pfam PF00990 Diguanylate cyclase, GGDEF domain 281 430 4.8E-42 T 11-11-2016 IPR000160 GGDEF domain WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 SMART SM00267 270 434 8.0E-57 T 11-11-2016 IPR000160 GGDEF domain WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 Pfam PF00072 Response regulator receiver domain 21 129 1.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 SUPERFAMILY SSF55073 286 433 3.77E-44 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 SUPERFAMILY SSF52172 17 151 5.55E-35 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 Gene3D G3DSA:3.40.50.2300 17 141 3.1E-35 T 11-11-2016 WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 SMART SM00448 19 130 8.7E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 Gene3D G3DSA:3.30.70.270 283 433 2.7E-48 T 11-11-2016 WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 277 433 1.5E-46 T 11-11-2016 IPR000160 GGDEF domain WS_RS01715 b162af8cd4c9ecb066f1474c315dbe8d 436 Gene3D G3DSA:3.30.450.20 142 268 2.4E-5 T 11-11-2016 WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 Gene3D G3DSA:1.10.8.60 140 210 1.2E-10 T 11-11-2016 WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 Gene3D G3DSA:1.10.3710.10 321 393 9.0E-15 T 11-11-2016 WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 SUPERFAMILY SSF52540 4 200 3.17E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 Gene3D G3DSA:1.20.272.10 223 319 7.1E-43 T 11-11-2016 WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 Gene3D G3DSA:3.40.50.300 3 139 1.3E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 SUPERFAMILY SSF48019 224 391 2.32E-58 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 Pfam PF16193 AAA C-terminal domain 166 239 4.0E-16 T 11-11-2016 IPR032423 AAA ATPase, C-terminal domain WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 Pfam PF12002 MgsA AAA+ ATPase C terminal 240 391 1.6E-52 T 11-11-2016 IPR021886 MgsA AAA+ ATPase C-terminal WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 125 1.9E-16 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 WS_RS06005 d7baf10564be476e11f39da3fc79bf62 396 SMART SM00382 37 150 1.6E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06525 c509e222d7dff1d68b2bef3926205bc5 677 Pfam PF00350 Dynamin family 65 217 3.0E-30 T 11-11-2016 IPR022812 Dynamin superfamily WS_RS06525 c509e222d7dff1d68b2bef3926205bc5 677 Gene3D G3DSA:3.40.50.300 61 94 6.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06525 c509e222d7dff1d68b2bef3926205bc5 677 Gene3D G3DSA:3.40.50.300 133 157 6.2E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06525 c509e222d7dff1d68b2bef3926205bc5 677 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 62 225 3.2E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS06525 c509e222d7dff1d68b2bef3926205bc5 677 SUPERFAMILY SSF52540 57 268 8.56E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06525 c509e222d7dff1d68b2bef3926205bc5 677 Gene3D G3DSA:3.40.50.300 158 251 2.6E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06525 c509e222d7dff1d68b2bef3926205bc5 677 Gene3D G3DSA:3.40.50.300 118 119 2.6E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05205 0ac3f362f51d4de1ee45eb488468a1e0 403 Gene3D G3DSA:1.10.443.10 180 379 8.3E-20 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 WS_RS05205 0ac3f362f51d4de1ee45eb488468a1e0 403 Pfam PF00589 Phage integrase family 208 373 5.5E-9 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 WS_RS05205 0ac3f362f51d4de1ee45eb488468a1e0 403 SUPERFAMILY SSF56349 77 375 9.12E-30 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 WS_RS05205 0ac3f362f51d4de1ee45eb488468a1e0 403 Gene3D G3DSA:1.10.150.130 92 173 4.0E-6 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 Gene3D G3DSA:2.40.30.10 222 307 3.4E-15 T 11-11-2016 WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 Pfam PF03143 Elongation factor Tu C-terminal domain 312 415 3.1E-6 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 Pfam PF00009 Elongation factor Tu GTP binding domain 8 190 1.9E-39 T 11-11-2016 WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 SUPERFAMILY SSF50465 316 415 2.01E-20 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 Gene3D G3DSA:3.40.50.300 6 211 1.4E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 Gene3D G3DSA:2.40.30.10 316 415 6.9E-11 T 11-11-2016 WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 60 75 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 SUPERFAMILY SSF52540 8 232 1.76E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 SUPERFAMILY SSF50447 216 308 3.77E-14 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 PRINTS PR00315 GTP-binding elongation factor signature 140 149 1.1E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 PRINTS PR00315 GTP-binding elongation factor signature 87 97 1.1E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 PRINTS PR00315 GTP-binding elongation factor signature 67 75 1.1E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS04850 08fd55c2d1fb0c97f485aad491d9b39d 459 PRINTS PR00315 GTP-binding elongation factor signature 103 114 1.1E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 Pfam PF07655 Secretin N-terminal domain 260 349 9.1E-18 T 11-11-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 Pfam PF07655 Secretin N-terminal domain 108 197 3.3E-18 T 11-11-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 387 697 1.0E-78 T 11-11-2016 IPR013358 Pilus biogenesis, MshL WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 Pfam PF07660 Secretin and TonB N terminus short domain 205 257 9.3E-12 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 Pfam PF07660 Secretin and TonB N terminus short domain 52 105 2.1E-12 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 PRINTS PR00811 Bacterial general secretion pathway protein D signature 662 680 1.3E-11 T 11-11-2016 IPR001775 GspD/PilQ family WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 PRINTS PR00811 Bacterial general secretion pathway protein D signature 422 432 1.3E-11 T 11-11-2016 IPR001775 GspD/PilQ family WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 PRINTS PR00811 Bacterial general secretion pathway protein D signature 685 699 1.3E-11 T 11-11-2016 IPR001775 GspD/PilQ family WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 PRINTS PR00811 Bacterial general secretion pathway protein D signature 520 544 1.3E-11 T 11-11-2016 IPR001775 GspD/PilQ family WS_RS02655 54efa255db904dbd40e2dc90af142d51 731 Pfam PF00263 Bacterial type II and III secretion system protein 525 698 2.4E-43 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 WS_RS03860 05ade7e2d1250a1373165ce75c3245ed 206 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 179 1.0E-58 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 WS_RS03860 05ade7e2d1250a1373165ce75c3245ed 206 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 138 159 - T 11-11-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 WS_RS03860 05ade7e2d1250a1373165ce75c3245ed 206 SUPERFAMILY SSF53850 1 200 9.99E-60 T 11-11-2016 WS_RS03860 05ade7e2d1250a1373165ce75c3245ed 206 Gene3D G3DSA:3.40.190.10 113 173 3.2E-27 T 11-11-2016 WS_RS03860 05ade7e2d1250a1373165ce75c3245ed 206 Pfam PF01634 ATP phosphoribosyltransferase 47 197 6.9E-48 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 WS_RS03860 05ade7e2d1250a1373165ce75c3245ed 206 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 203 51.646 T 11-11-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 WS_RS03860 05ade7e2d1250a1373165ce75c3245ed 206 Gene3D G3DSA:3.40.190.10 1 112 6.3E-28 T 11-11-2016 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SUPERFAMILY SSF55785 147 247 6.28E-29 T 11-11-2016 IPR000014 PAS domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Gene3D G3DSA:3.30.450.20 150 250 4.5E-27 T 11-11-2016 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 259 2.2E-19 T 11-11-2016 IPR000014 PAS domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SMART SM00388 272 337 2.2E-25 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Gene3D G3DSA:1.10.287.130 263 322 2.0E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Gene3D G3DSA:3.30.565.10 323 500 2.9E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SMART SM00091 136 204 8.3E-6 T 11-11-2016 IPR000014 PAS domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SUPERFAMILY SSF52172 5 139 8.68E-39 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Pfam PF00512 His Kinase A (phospho-acceptor) domain 273 337 4.0E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SUPERFAMILY SSF47384 258 338 1.18E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Pfam PF13426 PAS domain 152 250 6.6E-17 T 11-11-2016 IPR000014 PAS domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 500 5.8E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Pfam PF00072 Response regulator receiver domain 9 118 5.2E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SMART SM00086 210 252 2.4E-5 T 11-11-2016 IPR001610 PAC motif WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 Gene3D G3DSA:3.40.50.2300 5 139 6.0E-39 T 11-11-2016 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SMART SM00387 384 503 3.1E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SUPERFAMILY SSF55874 326 498 1.31E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 SMART SM00448 7 118 4.8E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 454 1.5E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 498 1.5E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 1.5E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS01055 d55eae172d00bab8f8d90393ca0d792e 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 479 1.5E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09725 ad844c702edcebdabe3caea2c4fcacb1 611 SUPERFAMILY SSF56519 41 237 1.02E-38 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 WS_RS09725 ad844c702edcebdabe3caea2c4fcacb1 611 Gene3D G3DSA:3.90.1310.10 121 236 1.8E-23 T 11-11-2016 WS_RS09725 ad844c702edcebdabe3caea2c4fcacb1 611 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 221 2.7E-30 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 WS_RS09725 ad844c702edcebdabe3caea2c4fcacb1 611 SUPERFAMILY SSF56601 238 592 9.13E-84 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS09725 ad844c702edcebdabe3caea2c4fcacb1 611 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 583 3.4E-57 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 WS_RS09725 ad844c702edcebdabe3caea2c4fcacb1 611 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 4 589 4.8E-175 T 11-11-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 WS_RS09725 ad844c702edcebdabe3caea2c4fcacb1 611 Gene3D G3DSA:3.40.710.10 237 591 2.1E-94 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS03620 55aa1cc3bd6315b5e78e7acae9209dcf 134 SUPERFAMILY SSF52788 1 124 4.19E-35 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS03620 55aa1cc3bd6315b5e78e7acae9209dcf 134 Gene3D G3DSA:3.40.50.270 1 124 3.5E-37 T 11-11-2016 WS_RS03620 55aa1cc3bd6315b5e78e7acae9209dcf 134 SMART SM00226 2 130 6.5E-33 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS03620 55aa1cc3bd6315b5e78e7acae9209dcf 134 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 124 6.2E-21 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 PIRSF PIRSF002741 2 521 4.0E-92 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 68 90 - T 11-11-2016 IPR023765 Solute-binding protein family 5, conserved site WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 Gene3D G3DSA:3.10.105.10 284 487 5.7E-44 T 11-11-2016 WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 Gene3D G3DSA:3.40.190.10 179 283 4.5E-28 T 11-11-2016 WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 515 7.2E-181 T 11-11-2016 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 SUPERFAMILY SSF53850 25 511 5.97E-112 T 11-11-2016 WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 63 430 6.4E-83 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain WS_RS04725 3c90bcfc218e4bb89ad7b51f83688410 521 Gene3D G3DSA:3.90.76.10 33 178 3.9E-32 T 11-11-2016 WS_RS07350 0fcad227e778d5c44b7c987d20d52781 299 SUPERFAMILY SSF56784 43 273 2.42E-39 T 11-11-2016 IPR023214 HAD-like domain WS_RS07350 0fcad227e778d5c44b7c987d20d52781 299 Pfam PF13242 HAD-hyrolase-like 220 279 4.1E-12 T 11-11-2016 WS_RS07350 0fcad227e778d5c44b7c987d20d52781 299 Gene3D G3DSA:3.40.50.1000 42 118 9.2E-31 T 11-11-2016 IPR023214 HAD-like domain WS_RS07350 0fcad227e778d5c44b7c987d20d52781 299 Gene3D G3DSA:3.40.50.1000 218 294 9.2E-31 T 11-11-2016 IPR023214 HAD-like domain WS_RS07350 0fcad227e778d5c44b7c987d20d52781 299 Pfam PF13344 Haloacid dehalogenase-like hydrolase 45 120 2.5E-14 T 11-11-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA WS_RS03755 efad16d095d091b1c650c614290e1cb7 429 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 29 263 3.3E-72 T 11-11-2016 IPR031489 D,L-carboxypeptidase, peptidase domain WS_RS03755 efad16d095d091b1c650c614290e1cb7 429 SUPERFAMILY SSF53187 27 246 9.92E-27 T 11-11-2016 WS_RS03755 efad16d095d091b1c650c614290e1cb7 429 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 342 427 9.9E-15 T 11-11-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain WS_RS03755 efad16d095d091b1c650c614290e1cb7 429 Gene3D G3DSA:3.40.630.10 30 243 1.4E-13 T 11-11-2016 WS_RS02070 5bee4b2888608a30a640c2a64513a6eb 341 Pfam PF00268 Ribonucleotide reductase, small chain 30 306 2.3E-69 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS02070 5bee4b2888608a30a640c2a64513a6eb 341 Gene3D G3DSA:1.10.620.20 16 314 2.2E-95 T 11-11-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 WS_RS02070 5bee4b2888608a30a640c2a64513a6eb 341 PIRSF PIRSF000355 1 341 4.7E-122 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS02070 5bee4b2888608a30a640c2a64513a6eb 341 SUPERFAMILY SSF47240 16 337 4.07E-90 T 11-11-2016 IPR009078 Ferritin-like superfamily WS_RS02070 5bee4b2888608a30a640c2a64513a6eb 341 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 119 135 - T 11-11-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Pfam PF00122 E1-E2 ATPase 276 496 7.2E-53 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SUPERFAMILY SSF81665 743 771 3.4E-13 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SUPERFAMILY SSF81665 405 499 3.4E-13 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SUPERFAMILY SSF81665 259 308 3.4E-13 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 507 513 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Gene3D G3DSA:3.40.50.1000 478 521 3.3E-40 T 11-11-2016 IPR023214 HAD-like domain WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Gene3D G3DSA:3.40.50.1000 614 763 3.3E-40 T 11-11-2016 IPR023214 HAD-like domain WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00942 Copper-transporting ATPase 1 signature 206 226 2.9E-10 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00942 Copper-transporting ATPase 1 signature 112 133 2.9E-10 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00942 Copper-transporting ATPase 1 signature 226 251 2.9E-10 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Pfam PF00403 Heavy-metal-associated domain 93 152 4.9E-10 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SUPERFAMILY SSF56784 503 523 2.54E-49 T 11-11-2016 IPR023214 HAD-like domain WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SUPERFAMILY SSF56784 559 794 2.54E-49 T 11-11-2016 IPR023214 HAD-like domain WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 225 797 3.0E-133 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 84 3.9E-21 T 11-11-2016 IPR021993 Putative metal-binding domain of cation transport ATPase WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 780 3.8E-81 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Pfam PF00702 haloacid dehalogenase-like hydrolase 502 707 7.3E-28 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 519 7.1E-27 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 729 7.1E-27 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 7.1E-27 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 630 7.1E-27 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 7.1E-27 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 7.1E-27 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 243 795 2.0E-142 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SUPERFAMILY SSF81653 307 404 3.66E-18 T 11-11-2016 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SMART SM00746 5 42 0.0022 T 11-11-2016 IPR011017 TRASH domain WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 SUPERFAMILY SSF55008 84 158 9.69E-19 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Gene3D G3DSA:2.70.150.10 254 405 1.6E-25 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS10225 a5b4ab4c2e78643f96c81506d0d8897d 799 Gene3D G3DSA:3.30.70.100 86 157 3.2E-17 T 11-11-2016 WS_RS05805 2cb330ffa89909f7db3294f816dfcbc8 201 Gene3D G3DSA:3.30.230.30 8 129 4.7E-30 T 11-11-2016 IPR001498 Impact, N-terminal WS_RS05805 2cb330ffa89909f7db3294f816dfcbc8 201 Pfam PF01205 Uncharacterized protein family UPF0029 21 124 1.3E-17 T 11-11-2016 IPR001498 Impact, N-terminal WS_RS05805 2cb330ffa89909f7db3294f816dfcbc8 201 SUPERFAMILY SSF54211 7 129 2.58E-31 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 SMART SM00363 13 70 9.5E-11 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 Gene3D G3DSA:3.10.290.10 11 62 5.9E-11 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 295 9.3E-65 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 SUPERFAMILY SSF55174 13 101 1.05E-10 T 11-11-2016 WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 132 146 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 Pfam PF01479 S4 domain 14 59 2.8E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 Pfam PF00849 RNA pseudouridylate synthase 86 240 2.7E-27 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS00715 12091f28106ef5b42f46477d96bd6c71 320 SUPERFAMILY SSF55120 74 295 1.28E-59 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS08110 6c16c02bd420065e480dc81466d4f808 75 Pfam PF11391 Protein of unknown function (DUF2798) 13 72 1.8E-23 T 11-11-2016 IPR021529 Protein of unknown function DUF2798 WS_RS05360 eade9b814a9fd4e3031b63a3a7f344e8 205 Pfam PF09347 Domain of unknown function (DUF1989) 12 177 1.3E-62 T 11-11-2016 IPR018959 Domain of unknown function DUF1989 WS_RS05360 eade9b814a9fd4e3031b63a3a7f344e8 205 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 6 203 1.2E-104 T 11-11-2016 IPR017791 Urea carboxylase-associated protein 1 WS_RS06595 c7dacbe161d14a984efa5bbd8eeb89ca 99 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 17 88 7.9E-14 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 WS_RS06595 c7dacbe161d14a984efa5bbd8eeb89ca 99 Gene3D G3DSA:3.10.20.30 4 96 2.7E-21 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS06595 c7dacbe161d14a984efa5bbd8eeb89ca 99 SUPERFAMILY SSF54292 6 94 4.08E-21 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 WS_RS06595 c7dacbe161d14a984efa5bbd8eeb89ca 99 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 SUPERFAMILY SSF103039 46 230 3.4E-27 T 11-11-2016 IPR028976 CheC-like domain WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 Gene3D G3DSA:3.40.1550.10 47 230 1.4E-5 T 11-11-2016 IPR028976 CheC-like domain WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 1.2E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.2E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.2E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 1.2E-29 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 Pfam PF02154 Flagellar motor switch protein FliM 40 230 2.7E-79 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 Gene3D G3DSA:2.30.330.10 242 327 4.8E-13 T 11-11-2016 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 SUPERFAMILY SSF101801 250 328 2.35E-15 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 PIRSF PIRSF002888 1 333 5.8E-115 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 323 1.0E-111 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 WS_RS07715 45e76d2848d6af275a1cbbf2e1fac11d 354 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 323 2.3E-17 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 Gene3D G3DSA:3.40.47.10 2 261 2.3E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 SUPERFAMILY SSF53901 2 256 4.07E-66 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 PIRSF PIRSF000447 1 413 1.7E-155 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 SUPERFAMILY SSF53901 220 412 4.17E-68 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 SMART SM00825 Beta-ketoacyl synthase 4 413 1.1E-11 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 251 7.4E-47 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 370 4.5E-33 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 Gene3D G3DSA:3.40.47.10 268 412 8.8E-60 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 WS_RS03070 242cef99d91ab8d4f58898592e520a14 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 411 4.6E-178 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-11-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 SUPERFAMILY SSF110324 2 83 5.23E-35 T 11-11-2016 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 Pfam PF01016 Ribosomal L27 protein 2 81 1.4E-39 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 2.2E-42 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 9.0E-18 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.2E-40 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.2E-40 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.2E-40 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.944 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02480 9f0bf983ad04c653b0033dca831a79f0 85 Gene3D G3DSA:2.40.50.100 20 83 1.4E-34 T 11-11-2016 WS_RS00120 1bb0e71e8dbae6ff4e9306bd0f7232a1 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 175 195 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site WS_RS00120 1bb0e71e8dbae6ff4e9306bd0f7232a1 372 Pfam PF00266 Aminotransferase class-V 3 318 2.4E-27 T 11-11-2016 IPR000192 Aminotransferase class V domain WS_RS00120 1bb0e71e8dbae6ff4e9306bd0f7232a1 372 Gene3D G3DSA:3.90.1150.10 247 350 4.1E-24 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS00120 1bb0e71e8dbae6ff4e9306bd0f7232a1 372 Gene3D G3DSA:3.40.640.10 14 246 8.0E-41 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS00120 1bb0e71e8dbae6ff4e9306bd0f7232a1 372 SUPERFAMILY SSF53383 2 351 3.69E-78 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS00120 1bb0e71e8dbae6ff4e9306bd0f7232a1 372 PIRSF PIRSF000524 1 369 4.6E-96 T 11-11-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:3.30.70.1440 673 721 1.4E-22 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:3.30.70.1440 818 847 1.4E-22 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:1.10.3850.10 281 499 1.8E-59 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82714 723 807 4.32E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:3.30.2090.10 723 811 1.3E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:3.30.2090.10 183 273 1.5E-23 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:3.30.70.1430 38 140 3.8E-32 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82714 184 272 7.46E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82693 38 131 6.63E-25 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:1.20.1640.10 848 1036 6.2E-47 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82693 275 331 2.88E-22 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82693 139 183 2.88E-22 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 Gene3D G3DSA:3.30.70.1430 571 672 2.3E-27 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82866 297 498 6.8E-48 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82866 810 1028 2.22E-43 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 SUPERFAMILY SSF82693 569 672 7.32E-24 T 11-11-2016 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS04330 a24c3bd8c024cd529b6361b2e466d0b2 1044 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.6E-96 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS10550 ad6b7bfc09fde640f1d94f1f9bdc0c84 163 Gene3D G3DSA:3.30.700.10 6 105 2.5E-7 T 11-11-2016 WS_RS10550 ad6b7bfc09fde640f1d94f1f9bdc0c84 163 SUPERFAMILY SSF54523 6 104 6.2E-14 T 11-11-2016 WS_RS10550 ad6b7bfc09fde640f1d94f1f9bdc0c84 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 26 5.8E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS10150 d136721b00bb0058dab9c9587d23e7cf 411 Pfam PF00033 Cytochrome b/b6/petB 29 215 1.8E-56 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 WS_RS10150 d136721b00bb0058dab9c9587d23e7cf 411 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 389 3.0E-29 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 WS_RS10150 d136721b00bb0058dab9c9587d23e7cf 411 Gene3D G3DSA:1.20.810.10 12 406 8.0E-127 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 WS_RS10150 d136721b00bb0058dab9c9587d23e7cf 411 SUPERFAMILY SSF81342 12 289 9.89E-82 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 WS_RS10150 d136721b00bb0058dab9c9587d23e7cf 411 SUPERFAMILY SSF81648 239 382 3.66E-38 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SMART SM00091 134 205 0.0024 T 11-11-2016 IPR000014 PAS domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SUPERFAMILY SSF141868 428 483 2.09E-12 T 11-11-2016 IPR001633 EAL domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 400 1.5E-21 T 11-11-2016 IPR000160 GGDEF domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SUPERFAMILY SSF52172 7 138 1.42E-31 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Gene3D G3DSA:3.30.450.20 150 252 4.4E-26 T 11-11-2016 WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 255 3.1E-19 T 11-11-2016 IPR000014 PAS domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Pfam PF00563 EAL domain 428 483 3.0E-9 T 11-11-2016 IPR001633 EAL domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Pfam PF00072 Response regulator receiver domain 10 119 1.0E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Gene3D G3DSA:3.20.20.450 426 485 1.9E-11 T 11-11-2016 IPR001633 EAL domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SMART SM00448 8 119 5.5E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SUPERFAMILY SSF55073 268 408 1.26E-24 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Gene3D G3DSA:3.30.70.270 265 411 6.1E-26 T 11-11-2016 WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 263 403 4.9E-18 T 11-11-2016 IPR000160 GGDEF domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Gene3D G3DSA:3.40.50.2300 9 132 1.4E-29 T 11-11-2016 WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SMART SM00267 252 410 2.0E-14 T 11-11-2016 IPR000160 GGDEF domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SUPERFAMILY SSF55785 149 249 6.28E-28 T 11-11-2016 IPR000014 PAS domain WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 SMART SM00086 211 253 1.2E-6 T 11-11-2016 IPR001610 PAC motif WS_RS04915 f0329f166d2c09b2019c2b98fad8f20f 493 Pfam PF08447 PAS fold 163 246 3.6E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 SUPERFAMILY SSF110942 499 615 2.22E-32 T 11-11-2016 WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 151 1.7E-13 T 11-11-2016 WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 615 30.893 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PIRSF PIRSF002583 1 618 2.6E-212 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 SUPERFAMILY SSF55874 2 208 5.76E-67 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 Gene3D G3DSA:3.30.565.10 2 208 3.5E-81 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PRINTS PR00775 90kDa heat shock protein signature 2 22 1.1E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PRINTS PR00775 90kDa heat shock protein signature 72 89 1.1E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PRINTS PR00775 90kDa heat shock protein signature 185 203 1.1E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PRINTS PR00775 90kDa heat shock protein signature 167 184 1.1E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PRINTS PR00775 90kDa heat shock protein signature 90 107 1.1E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PRINTS PR00775 90kDa heat shock protein signature 23 45 1.1E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 PRINTS PR00775 90kDa heat shock protein signature 117 139 1.1E-62 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 SUPERFAMILY SSF54211 227 477 2.58E-93 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 Pfam PF00183 Hsp90 protein 209 617 1.1E-116 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 WS_RS08180 ac3b2201594578f5cac89b53329dd5b4 618 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 11-11-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 WS_RS01105 0be83b85b3a6629f3c4ad586bff8f9c3 261 SUPERFAMILY SSF53098 63 234 1.07E-45 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS01105 0be83b85b3a6629f3c4ad586bff8f9c3 261 SMART SM00479 70 234 4.5E-41 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III WS_RS01105 0be83b85b3a6629f3c4ad586bff8f9c3 261 Gene3D G3DSA:3.30.420.10 63 235 1.3E-48 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS01105 0be83b85b3a6629f3c4ad586bff8f9c3 261 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 68 229 1.5E-27 T 11-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS01105 0be83b85b3a6629f3c4ad586bff8f9c3 261 Pfam PF00929 Exonuclease 73 225 2.0E-31 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 ProSitePatterns PS00938 Initiation factor 3 signature. 61 74 - T 11-11-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 SUPERFAMILY SSF54364 8 81 8.89E-30 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 86 171 5.1E-29 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 10 172 1.0E-64 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 Gene3D G3DSA:3.10.20.80 6 81 8.0E-36 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 SUPERFAMILY SSF55200 86 174 3.53E-26 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 10 79 1.1E-31 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 Gene3D G3DSA:3.30.110.10 82 174 1.5E-28 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 WS_RS03950 dd234089c938c81b11e3fa65417d1289 176 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 173 28.427 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 638 718 2.7E-21 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 320 1.4E-13 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 SUPERFAMILY SSF81923 1 139 3.53E-41 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Gene3D G3DSA:1.10.1780.10 1 139 7.8E-29 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Gene3D G3DSA:1.10.8.60 342 422 5.9E-29 T 11-11-2016 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 SUPERFAMILY SSF52540 428 726 2.21E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Gene3D G3DSA:3.40.50.300 159 340 2.1E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 479 497 3.9E-38 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 550 568 3.9E-38 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 583 597 3.9E-38 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 521 539 3.9E-38 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 SMART SM01086 638 727 3.1E-29 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Gene3D G3DSA:3.40.50.300 432 648 1.6E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 719 0.0 T 11-11-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 SMART SM00382 196 342 5.1E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 SMART SM00382 475 639 1.0E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Pfam PF07724 AAA domain (Cdc48 subfamily) 474 632 6.2E-47 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 506 524 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 SUPERFAMILY SSF52540 158 404 5.4E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.6E-9 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 WS_RS01680 46a248c5aa23e0e5464d88a675d011f5 738 Gene3D G3DSA:1.10.8.60 649 729 1.8E-26 T 11-11-2016 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-11-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.3E-31 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.3E-51 T 11-11-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 PIRSF PIRSF002134 1 122 5.8E-41 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 Gene3D G3DSA:1.10.8.50 1 71 1.4E-28 T 11-11-2016 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 26.992 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 SUPERFAMILY SSF46946 2 118 7.23E-42 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 WS_RS07980 a327474fc15959e95f0f8e6249738cd1 122 Gene3D G3DSA:4.10.910.10 73 119 1.5E-24 T 11-11-2016 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 SMART SM00862 151 227 3.4E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 SMART SM00448 2 112 7.8E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 Pfam PF00072 Response regulator receiver domain 4 112 3.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 2.4E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 Gene3D G3DSA:1.10.10.10 134 229 2.4E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 SUPERFAMILY SSF46894 137 228 8.79E-22 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 Gene3D G3DSA:3.40.50.2300 1 126 2.0E-34 T 11-11-2016 WS_RS08540 221bf4b4c316c02093a64413b8be8e92 230 SUPERFAMILY SSF52172 2 124 2.85E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS03235 685c3ec906699812c459a120d947b80d 471 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 5 465 4.5E-237 T 11-11-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 WS_RS03235 685c3ec906699812c459a120d947b80d 471 SUPERFAMILY SSF48557 4 461 9.28E-149 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 WS_RS03235 685c3ec906699812c459a120d947b80d 471 Gene3D G3DSA:1.10.275.10 3 140 1.3E-54 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal WS_RS03235 685c3ec906699812c459a120d947b80d 471 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 9.8E-30 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS03235 685c3ec906699812c459a120d947b80d 471 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 9.8E-30 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS03235 685c3ec906699812c459a120d947b80d 471 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 9.8E-30 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS03235 685c3ec906699812c459a120d947b80d 471 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 9.8E-30 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS03235 685c3ec906699812c459a120d947b80d 471 Gene3D G3DSA:1.10.40.30 420 465 1.2E-24 T 11-11-2016 WS_RS03235 685c3ec906699812c459a120d947b80d 471 PRINTS PR00145 Argininosuccinate lyase family signature 135 157 7.3E-7 T 11-11-2016 WS_RS03235 685c3ec906699812c459a120d947b80d 471 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 7.3E-7 T 11-11-2016 WS_RS03235 685c3ec906699812c459a120d947b80d 471 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 7.3E-7 T 11-11-2016 WS_RS03235 685c3ec906699812c459a120d947b80d 471 Gene3D G3DSA:1.20.200.10 141 419 1.4E-89 T 11-11-2016 WS_RS03235 685c3ec906699812c459a120d947b80d 471 Pfam PF00206 Lyase 14 343 4.9E-105 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal WS_RS03235 685c3ec906699812c459a120d947b80d 471 Pfam PF10415 Fumarase C C-terminus 409 461 2.2E-23 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 WS_RS03235 685c3ec906699812c459a120d947b80d 471 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 WS_RS02945 5e5f904f5165b2497b9e6afe5204f7ef 229 Gene3D G3DSA:3.40.1130.10 62 184 7.5E-18 T 11-11-2016 WS_RS02945 5e5f904f5165b2497b9e6afe5204f7ef 229 SMART SM00563 61 176 4.2E-32 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 WS_RS02945 5e5f904f5165b2497b9e6afe5204f7ef 229 SUPERFAMILY SSF69593 7 221 1.09E-30 T 11-11-2016 WS_RS02945 5e5f904f5165b2497b9e6afe5204f7ef 229 Pfam PF01553 Acyltransferase 63 173 1.0E-22 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 WS_RS02945 5e5f904f5165b2497b9e6afe5204f7ef 229 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 47 173 1.6E-35 T 11-11-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 WS_RS01030 ec7275945ae17471823eede11d995d7e 257 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 4 251 33.141 T 11-11-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 WS_RS01030 ec7275945ae17471823eede11d995d7e 257 Pfam PF02540 NAD synthase 10 248 3.2E-82 T 11-11-2016 IPR022310 NAD/GMP synthase WS_RS01030 ec7275945ae17471823eede11d995d7e 257 SUPERFAMILY SSF52402 4 250 1.09E-72 T 11-11-2016 WS_RS01030 ec7275945ae17471823eede11d995d7e 257 TIGRFAM TIGR00552 nadE: NAD+ synthetase 7 249 6.8E-80 T 11-11-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 WS_RS01030 ec7275945ae17471823eede11d995d7e 257 Gene3D G3DSA:3.40.50.620 5 251 8.1E-74 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 370 3.8E-133 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 SUPERFAMILY SSF52317 180 374 2.52E-49 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 9.9E-33 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 9.9E-33 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 9.9E-33 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 9.9E-33 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 189 203 9.9E-33 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 Pfam PF00117 Glutamine amidotransferase class-I 191 370 6.1E-37 T 11-11-2016 IPR017926 Glutamine amidotransferase WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 129 1.0E-45 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00097 Anthranilate synthase component II signature 347 360 9.8E-5 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00097 Anthranilate synthase component II signature 263 274 9.8E-5 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00097 Anthranilate synthase component II signature 235 244 9.8E-5 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 SMART SM01097 2 132 2.5E-74 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 3.1E-10 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 3.1E-10 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 3.1E-10 T 11-11-2016 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 SUPERFAMILY SSF52021 2 148 8.63E-51 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 Gene3D G3DSA:3.50.30.20 2 147 6.4E-52 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 376 43.356 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 WS_RS09660 859f15c278ccf46fafdf9e9d7a710fe2 377 Gene3D G3DSA:3.40.50.880 152 374 6.7E-58 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS00535 1733dc02d87b75b0372c04113ece373e 453 Gene3D G3DSA:3.80.30.20 71 259 7.6E-24 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS00535 1733dc02d87b75b0372c04113ece373e 453 Pfam PF04055 Radical SAM superfamily 77 239 1.3E-11 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS00535 1733dc02d87b75b0372c04113ece373e 453 SUPERFAMILY SSF102114 58 434 1.44E-67 T 11-11-2016 WS_RS00535 1733dc02d87b75b0372c04113ece373e 453 SMART SM00729 71 283 5.3E-32 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS02080 7876e86fea3638bbd23c2ae0b577bedd 131 Gene3D G3DSA:3.10.180.10 6 117 6.3E-27 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase WS_RS02080 7876e86fea3638bbd23c2ae0b577bedd 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 63 112 3.9E-5 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain WS_RS02080 7876e86fea3638bbd23c2ae0b577bedd 131 SUPERFAMILY SSF54593 8 117 1.01E-23 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase WS_RS02475 ff6db83d3d55327f5882e1cb9bbb9a77 103 SUPERFAMILY SSF141091 1 101 5.76E-32 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02475 ff6db83d3d55327f5882e1cb9bbb9a77 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.0E-37 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02475 ff6db83d3d55327f5882e1cb9bbb9a77 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 23.556 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02475 ff6db83d3d55327f5882e1cb9bbb9a77 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.8E-34 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02475 ff6db83d3d55327f5882e1cb9bbb9a77 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-11-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS04745 97d317a263a6b34a17ad7c99927c155b 274 SUPERFAMILY SSF161098 66 253 5.76E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04745 97d317a263a6b34a17ad7c99927c155b 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 5.7E-24 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04745 97d317a263a6b34a17ad7c99927c155b 274 Gene3D G3DSA:1.10.3720.10 66 269 2.3E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04745 97d317a263a6b34a17ad7c99927c155b 274 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 1.0E-122 T 11-11-2016 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 Hamap MF_00235 Adenylate kinase [adk]. 3 187 34.832 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 PRINTS PR00094 Adenylate kinase signature 6 19 2.5E-24 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 PRINTS PR00094 Adenylate kinase signature 134 149 2.5E-24 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 PRINTS PR00094 Adenylate kinase signature 84 100 2.5E-24 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 PRINTS PR00094 Adenylate kinase signature 151 165 2.5E-24 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 PRINTS PR00094 Adenylate kinase signature 36 50 2.5E-24 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 Pfam PF00406 Adenylate kinase 7 164 1.8E-35 T 11-11-2016 WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 Gene3D G3DSA:3.40.50.300 3 189 3.9E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 SUPERFAMILY SSF52540 2 189 9.42E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08390 c8c10f777205695d38cdfa2d561e258f 190 ProSitePatterns PS00113 Adenylate kinase signature. 84 95 - T 11-11-2016 WS_RS03450 ee2fbdb92d8998b8f7f79dc56048cdf5 432 SUPERFAMILY SSF56801 22 396 7.98E-57 T 11-11-2016 WS_RS03450 ee2fbdb92d8998b8f7f79dc56048cdf5 432 Gene3D G3DSA:3.30.300.30 324 431 1.5E-33 T 11-11-2016 WS_RS03450 ee2fbdb92d8998b8f7f79dc56048cdf5 432 Pfam PF00501 AMP-binding enzyme 76 286 2.4E-13 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 WS_RS03450 ee2fbdb92d8998b8f7f79dc56048cdf5 432 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 430 2.0E-27 T 11-11-2016 IPR028154 AMP-dependent ligase, C-terminal WS_RS03450 ee2fbdb92d8998b8f7f79dc56048cdf5 432 Gene3D G3DSA:3.40.50.980 84 241 1.1E-12 T 11-11-2016 WS_RS03450 ee2fbdb92d8998b8f7f79dc56048cdf5 432 PIRSF PIRSF006444 1 432 2.9E-206 T 11-11-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 WS_RS05340 c58d8a41f5d1a3ab3cd68aeb65346519 355 Gene3D G3DSA:3.40.190.10 129 238 5.1E-11 T 11-11-2016 WS_RS05340 c58d8a41f5d1a3ab3cd68aeb65346519 355 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 31 355 1.8E-175 T 11-11-2016 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein WS_RS05340 c58d8a41f5d1a3ab3cd68aeb65346519 355 SUPERFAMILY SSF53850 38 250 6.83E-35 T 11-11-2016 WS_RS05340 c58d8a41f5d1a3ab3cd68aeb65346519 355 Pfam PF09084 NMT1/THI5 like 59 240 7.0E-8 T 11-11-2016 IPR015168 SsuA/THI5-like WS_RS08475 9c9e7d148c75e9c9d58bf73244c5df24 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 221 3.1E-27 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS08475 9c9e7d148c75e9c9d58bf73244c5df24 227 SUPERFAMILY SSF161098 4 217 7.19E-49 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS08475 9c9e7d148c75e9c9d58bf73244c5df24 227 Gene3D G3DSA:1.10.3720.10 4 221 2.6E-43 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS08475 9c9e7d148c75e9c9d58bf73244c5df24 227 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 219 5.7E-69 T 11-11-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 7 405 46.191 T 11-11-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 SMART SM00363 345 404 0.0038 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 17 405 1.8E-126 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 SUPERFAMILY SSF52374 17 327 1.38E-90 T 11-11-2016 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 55 77 1.0E-21 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 1.0E-21 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.0E-21 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 1.0E-21 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 Pfam PF00579 tRNA synthetases class I (W and Y) 40 327 3.5E-82 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 Gene3D G3DSA:3.10.290.10 338 404 1.9E-20 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 Gene3D G3DSA:1.10.240.10 238 337 5.4E-35 T 11-11-2016 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 SUPERFAMILY SSF55174 309 405 5.1E-17 T 11-11-2016 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 61 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 Pfam PF01479 S4 domain 355 392 1.2E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS01195 5c4658ba71e637754e2c575305a2429b 406 Gene3D G3DSA:3.40.50.620 17 237 1.9E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 Gene3D G3DSA:3.30.360.10 146 320 8.1E-81 T 11-11-2016 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 322 2.0E-60 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 Gene3D G3DSA:3.40.50.720 2 145 1.1E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 SUPERFAMILY SSF51735 3 159 1.08E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 SMART SM00859 5 122 6.8E-47 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 120 1.2E-33 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 234 248 - T 11-11-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 337 6.9E-144 T 11-11-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 SUPERFAMILY SSF55347 132 324 3.57E-76 T 11-11-2016 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 PIRSF PIRSF000148 3 340 1.2E-127 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS01825 bc4366fa9f2f89dd41ad6715299311b6 343 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 337 38.931 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS08755 e5cd95625116ea0298a16ae375d893b1 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 3.3E-165 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 WS_RS08755 e5cd95625116ea0298a16ae375d893b1 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 2.5E-121 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit WS_RS08755 e5cd95625116ea0298a16ae375d893b1 428 PIRSF PIRSF006066 1 427 2.0E-171 T 11-11-2016 IPR004681 TRAP transporter permease protein GO:0016021 WS_RS04050 7b10c13ea027207a2d3b9509d971f330 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 11 493 1.5E-229 T 11-11-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 WS_RS04050 7b10c13ea027207a2d3b9509d971f330 496 Pfam PF00474 Sodium:solute symporter family 40 438 1.2E-103 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS04050 7b10c13ea027207a2d3b9509d971f330 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 40 438 1.6E-96 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 SUPERFAMILY SSF55257 11 53 9.29E-22 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 SUPERFAMILY SSF55257 174 229 9.29E-22 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Gene3D G3DSA:2.170.120.12 53 172 9.2E-32 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 SMART SM00662 23 229 1.4E-53 T 11-11-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 223 4.5E-12 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 SUPERFAMILY SSF56553 53 173 6.28E-31 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 155 2.0E-15 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 25 313 1.0E-90 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 306 2.0E-25 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 314 29.751 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Gene3D G3DSA:3.30.1360.10 173 226 1.0E-23 T 11-11-2016 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Gene3D G3DSA:3.30.1360.10 12 51 1.0E-23 T 11-11-2016 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 SUPERFAMILY SSF47789 248 316 6.15E-21 T 11-11-2016 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 318 9.0E-19 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS07965 e50ed519e35aa50d73e2cffe8477f0fe 331 Gene3D G3DSA:1.10.150.20 243 317 4.8E-24 T 11-11-2016 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 48 66 1.1E-31 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 68 91 1.1E-31 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 130 149 1.1E-31 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 185 205 1.1E-31 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 298 324 1.1E-31 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 Pfam PF06723 MreB/Mbl protein 9 330 1.7E-100 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 SUPERFAMILY SSF53067 148 324 2.25E-39 T 11-11-2016 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 SUPERFAMILY SSF53067 9 146 3.63E-26 T 11-11-2016 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 Gene3D G3DSA:3.30.420.40 261 315 1.4E-23 T 11-11-2016 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 Gene3D G3DSA:3.30.420.40 158 184 1.4E-23 T 11-11-2016 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 SMART SM00268 8 331 0.0014 T 11-11-2016 IPR004000 Actin family WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 Gene3D G3DSA:3.30.420.40 8 157 5.9E-28 T 11-11-2016 WS_RS04675 551fe3508eb4aa38e5f56807d1f3db4f 337 Gene3D G3DSA:3.90.640.10 185 255 1.8E-18 T 11-11-2016 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 SUPERFAMILY SSF53697 237 595 6.59E-89 T 11-11-2016 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 SUPERFAMILY SSF56235 2 220 8.32E-66 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 Gene3D G3DSA:3.60.20.10 2 220 1.1E-68 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 Pfam PF01380 SIS domain 458 541 2.5E-12 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 Pfam PF01380 SIS domain 284 404 2.0E-28 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 Gene3D G3DSA:3.40.50.10490 237 431 1.3E-64 T 11-11-2016 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 595 1.8E-228 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 595 36.227 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 Pfam PF13522 Glutamine amidotransferase domain 67 192 1.7E-20 T 11-11-2016 WS_RS00110 a5d98aff3f83d0a90de5b2c3d4fe72e9 595 Gene3D G3DSA:3.40.50.10490 442 595 6.1E-46 T 11-11-2016 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 64 124 7.5E-6 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 481 33.136 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 SUPERFAMILY SSF52949 34 135 8.83E-11 T 11-11-2016 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 PRINTS PR00481 Cytosol aminopeptidase signature 262 283 5.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 PRINTS PR00481 Cytosol aminopeptidase signature 321 341 5.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 PRINTS PR00481 Cytosol aminopeptidase signature 299 320 5.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 PRINTS PR00481 Cytosol aminopeptidase signature 240 257 5.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 PRINTS PR00481 Cytosol aminopeptidase signature 349 364 5.6E-49 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 SUPERFAMILY SSF53187 160 479 5.34E-110 T 11-11-2016 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 Gene3D G3DSA:3.40.220.10 35 160 2.7E-13 T 11-11-2016 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 325 332 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 164 472 4.5E-109 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 WS_RS06460 a6489a1b3ba818670d31888812e57e26 483 Gene3D G3DSA:3.40.630.10 161 481 8.7E-126 T 11-11-2016 WS_RS04785 8d97279c72131cde3433476e486f8800 98 SUPERFAMILY SSF54285 20 78 1.6E-9 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp WS_RS04785 8d97279c72131cde3433476e486f8800 98 Gene3D G3DSA:3.10.20.30 1 76 1.1E-15 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS04785 8d97279c72131cde3433476e486f8800 98 Pfam PF02597 ThiS family 22 80 1.8E-11 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 WS_RS05900 336f4f30e065cbdc451b76a5cd422342 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 169 3.0E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS05900 336f4f30e065cbdc451b76a5cd422342 656 Pfam PF00593 TonB dependent receptor 428 654 2.2E-22 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS05900 336f4f30e065cbdc451b76a5cd422342 656 Gene3D G3DSA:2.40.170.20 171 655 1.8E-55 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS05900 336f4f30e065cbdc451b76a5cd422342 656 SUPERFAMILY SSF56935 66 656 4.81E-76 T 11-11-2016 WS_RS05900 336f4f30e065cbdc451b76a5cd422342 656 Gene3D G3DSA:2.170.130.10 67 170 1.5E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS06590 d26ce235e371469f1c80cf8685932b36 336 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 1 323 6.3E-89 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS06590 d26ce235e371469f1c80cf8685932b36 336 Pfam PF04552 Sigma-54, DNA binding domain 176 323 7.7E-37 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding WS_RS06590 d26ce235e371469f1c80cf8685932b36 336 PRINTS PR00045 Sigma-54 factor signature 244 255 3.7E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS06590 d26ce235e371469f1c80cf8685932b36 336 PRINTS PR00045 Sigma-54 factor signature 299 317 3.7E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS06590 d26ce235e371469f1c80cf8685932b36 336 PRINTS PR00045 Sigma-54 factor signature 65 82 3.7E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS06590 d26ce235e371469f1c80cf8685932b36 336 PRINTS PR00045 Sigma-54 factor signature 228 240 3.7E-15 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 WS_RS06590 d26ce235e371469f1c80cf8685932b36 336 Pfam PF04963 Sigma-54 factor, core binding domain 1 157 6.9E-22 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 WS_RS09875 c7fca153d96a071ddc39444d8eb37f15 370 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 18 368 2.3E-121 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 WS_RS09875 c7fca153d96a071ddc39444d8eb37f15 370 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 302 331 - T 11-11-2016 IPR030390 RNA methyltransferase TrmA, active site WS_RS09875 c7fca153d96a071ddc39444d8eb37f15 370 Gene3D G3DSA:3.40.50.150 160 367 1.6E-41 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS09875 c7fca153d96a071ddc39444d8eb37f15 370 SUPERFAMILY SSF53335 2 366 1.13E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS09875 c7fca153d96a071ddc39444d8eb37f15 370 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 12 369 38.576 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 WS_RS09875 c7fca153d96a071ddc39444d8eb37f15 370 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 351 361 - T 11-11-2016 IPR030391 RNA methyltransferase TrmA, conserved site WS_RS09875 c7fca153d96a071ddc39444d8eb37f15 370 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 18 368 1.4E-120 T 11-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 WS_RS09345 d9ef5e816b340d6d04f7fca08dd289b7 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 326 4.5E-132 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 WS_RS09345 d9ef5e816b340d6d04f7fca08dd289b7 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 326 1.2E-32 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 WS_RS09345 d9ef5e816b340d6d04f7fca08dd289b7 330 SUPERFAMILY SSF53901 7 327 1.6E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 WS_RS09345 d9ef5e816b340d6d04f7fca08dd289b7 330 Gene3D G3DSA:3.40.47.10 161 327 1.1E-48 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 WS_RS09345 d9ef5e816b340d6d04f7fca08dd289b7 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 186 1.2E-29 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 WS_RS09345 d9ef5e816b340d6d04f7fca08dd289b7 330 Gene3D G3DSA:3.40.47.10 5 160 8.2E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 WS_RS09345 d9ef5e816b340d6d04f7fca08dd289b7 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 327 66.848 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 WS_RS02955 6c5c834644881e4cadea3ec7c6d425bb 218 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 216 1.5E-87 T 11-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS02955 6c5c834644881e4cadea3ec7c6d425bb 218 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 204 2.7E-41 T 11-11-2016 WS_RS02955 6c5c834644881e4cadea3ec7c6d425bb 218 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 41.047 T 11-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS02955 6c5c834644881e4cadea3ec7c6d425bb 218 PIRSF PIRSF001586 1 217 4.7E-80 T 11-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS02955 6c5c834644881e4cadea3ec7c6d425bb 218 SUPERFAMILY SSF52317 1 216 3.01E-69 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS02955 6c5c834644881e4cadea3ec7c6d425bb 218 SMART SM01211 1 218 1.2E-114 T 11-11-2016 WS_RS02955 6c5c834644881e4cadea3ec7c6d425bb 218 Gene3D G3DSA:3.40.50.880 1 214 7.0E-41 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS03665 0436d6c89b608182428e533ea24fafcb 279 Pfam PF12849 PBP superfamily domain 20 262 2.5E-31 T 11-11-2016 IPR024370 PBP domain WS_RS03665 0436d6c89b608182428e533ea24fafcb 279 Gene3D G3DSA:3.40.190.10 21 151 1.1E-32 T 11-11-2016 WS_RS03665 0436d6c89b608182428e533ea24fafcb 279 SUPERFAMILY SSF53850 22 277 1.83E-53 T 11-11-2016 WS_RS09625 92ce7becbc1bc622227bc32c33c25404 152 SUPERFAMILY SSF46785 18 144 2.18E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS09625 92ce7becbc1bc622227bc32c33c25404 152 Gene3D G3DSA:1.10.10.10 14 92 2.5E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS09625 92ce7becbc1bc622227bc32c33c25404 152 Pfam PF01475 Ferric uptake regulator family 21 139 3.3E-35 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 7.3E-47 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 Gene3D G3DSA:3.40.50.970 2 174 1.5E-72 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 535 1.3E-49 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 SUPERFAMILY SSF52467 185 355 1.47E-62 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 SUPERFAMILY SSF52518 365 560 4.13E-68 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 SUPERFAMILY SSF52518 2 183 9.38E-65 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 Gene3D G3DSA:3.40.50.970 358 561 6.2E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 164 6.5E-57 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 Gene3D G3DSA:3.40.50.1220 187 357 2.7E-63 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain WS_RS00490 bf861d6d4085be909aa59dae4066c456 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 558 9.4E-249 T 11-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 WS_RS01835 693dc0d55c8e4ee3ffe18750c476556a 340 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 135 151 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 WS_RS01835 693dc0d55c8e4ee3ffe18750c476556a 340 Gene3D G3DSA:3.20.20.210 3 337 2.6E-125 T 11-11-2016 WS_RS01835 693dc0d55c8e4ee3ffe18750c476556a 340 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 3 335 7.0E-126 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 WS_RS01835 693dc0d55c8e4ee3ffe18750c476556a 340 SUPERFAMILY SSF51726 3 338 4.53E-101 T 11-11-2016 WS_RS01835 693dc0d55c8e4ee3ffe18750c476556a 340 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 1 338 45.541 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 WS_RS01835 693dc0d55c8e4ee3ffe18750c476556a 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 335 3.8E-113 T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 WS_RS01835 693dc0d55c8e4ee3ffe18750c476556a 340 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 16 25 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 Gene3D G3DSA:3.90.740.10 208 388 2.6E-50 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 798 5.1E-271 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 Pfam PF08264 Anticodon-binding domain of tRNA 689 840 3.3E-18 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 915 19.279 T 11-11-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 1.7E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.7E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 398 413 1.7E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 568 577 1.7E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 233 256 1.7E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 SUPERFAMILY SSF50677 205 400 1.15E-43 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 SUPERFAMILY SSF52374 400 655 4.56E-135 T 11-11-2016 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 SUPERFAMILY SSF52374 1 203 4.56E-135 T 11-11-2016 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 Gene3D G3DSA:1.10.730.10 649 782 1.3E-29 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 SUPERFAMILY SSF47323 659 914 8.78E-47 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 648 1.5E-216 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 Gene3D G3DSA:3.40.50.620 13 201 4.2E-135 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 Gene3D G3DSA:3.40.50.620 403 644 4.2E-135 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00905 939f2780d72f7d7a5c14c14a6109c6f6 915 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01125 1e9a115a6728b3b7923ab4eca6149421 534 Pfam PF02272 DHHA1 domain 345 408 2.3E-10 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 WS_RS01125 1e9a115a6728b3b7923ab4eca6149421 534 Pfam PF01368 DHH family 60 165 1.4E-12 T 11-11-2016 IPR001667 DDH domain WS_RS01125 1e9a115a6728b3b7923ab4eca6149421 534 SUPERFAMILY SSF64182 34 415 8.89E-105 T 11-11-2016 WS_RS01125 1e9a115a6728b3b7923ab4eca6149421 534 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 530 3.9E-149 T 11-11-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 WS_RS08890 27f2c046d60d0c770596fae00e15005d 66 Pfam PF02609 Exonuclease VII small subunit 4 51 2.8E-11 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 WS_RS08890 27f2c046d60d0c770596fae00e15005d 66 SUPERFAMILY SSF116842 3 63 6.67E-11 T 11-11-2016 WS_RS08890 27f2c046d60d0c770596fae00e15005d 66 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 3 58 4.6E-13 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 WS_RS08890 27f2c046d60d0c770596fae00e15005d 66 Gene3D G3DSA:1.10.287.1040 3 64 2.8E-10 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 WS_RS05610 6859c4ac681d0887ebc11cb0e28609d4 319 SUPERFAMILY SSF50978 38 318 1.53E-20 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 WS_RS05610 6859c4ac681d0887ebc11cb0e28609d4 319 SMART SM00320 197 235 6.9 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS05610 6859c4ac681d0887ebc11cb0e28609d4 319 SMART SM00320 279 317 0.51 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS05610 6859c4ac681d0887ebc11cb0e28609d4 319 Gene3D G3DSA:2.130.10.10 36 318 7.6E-20 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 SMART SM00862 148 220 7.5E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 SMART SM00448 3 114 4.5E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 SUPERFAMILY SSF46894 148 219 5.61E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 Gene3D G3DSA:1.10.10.10 134 219 7.6E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 SUPERFAMILY SSF52172 4 170 3.84E-36 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 Gene3D G3DSA:3.40.50.2300 3 128 2.4E-36 T 11-11-2016 WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 Pfam PF00072 Response regulator receiver domain 5 114 3.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00370 8784c3759d773eebefdd3cd9e9d70451 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 219 5.2E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04350 1638196418d17adf18bc1fd8b6867e7c 245 SUPERFAMILY SSF52540 4 206 5.66E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04350 1638196418d17adf18bc1fd8b6867e7c 245 Pfam PF00005 ABC transporter 19 152 5.1E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS04350 1638196418d17adf18bc1fd8b6867e7c 245 Gene3D G3DSA:3.40.50.300 3 208 1.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04350 1638196418d17adf18bc1fd8b6867e7c 245 SMART SM00382 28 202 1.3E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS04350 1638196418d17adf18bc1fd8b6867e7c 245 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS10415 4a3d72e45f6cb5a17d1590972a0a433c 380 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 214 364 7.5E-14 T 11-11-2016 IPR000160 GGDEF domain WS_RS10415 4a3d72e45f6cb5a17d1590972a0a433c 380 SMART SM00267 205 375 4.7E-6 T 11-11-2016 IPR000160 GGDEF domain WS_RS10415 4a3d72e45f6cb5a17d1590972a0a433c 380 SUPERFAMILY SSF55073 223 364 3.37E-14 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10415 4a3d72e45f6cb5a17d1590972a0a433c 380 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 365 1.3E-9 T 11-11-2016 IPR000160 GGDEF domain WS_RS10415 4a3d72e45f6cb5a17d1590972a0a433c 380 Gene3D G3DSA:3.30.70.270 219 365 4.4E-15 T 11-11-2016 WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 Gene3D G3DSA:3.40.50.300 20 178 1.6E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 SUPERFAMILY SSF46785 257 326 2.68E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 325 7.4E-132 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 SUPERFAMILY SSF52540 20 250 2.16E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 329 1.0E-39 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 148.109 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 Gene3D G3DSA:1.10.8.60 183 255 1.6E-24 T 11-11-2016 WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 8.5E-108 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 SMART SM00382 51 182 1.0E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 Gene3D G3DSA:1.10.10.10 257 326 1.1E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08580 82c2538469d6fec3abc441d845f341d9 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 325 3.0E-26 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 Gene3D G3DSA:3.30.565.10 265 403 3.3E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 Pfam PF00512 His Kinase A (phospho-acceptor) domain 197 252 1.6E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 SMART SM00388 196 261 7.5E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 SMART SM00387 303 407 2.8E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 SUPERFAMILY SSF55874 264 402 1.7E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 404 7.4E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 385 7.4E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 350 7.4E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 SUPERFAMILY SSF47384 186 254 2.75E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 Gene3D G3DSA:1.10.287.130 190 253 1.3E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00375 1d39c428a4e457b52dbe502dbf1205ab 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 405 5.7E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01685 ca4f9d2add4a4748e211a1ff9d99d454 226 SUPERFAMILY SSF55729 7 224 8.48E-80 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS01685 ca4f9d2add4a4748e211a1ff9d99d454 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 32 201 3.8E-65 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 WS_RS01685 ca4f9d2add4a4748e211a1ff9d99d454 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 79.543 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 WS_RS01685 ca4f9d2add4a4748e211a1ff9d99d454 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 29 216 2.3E-55 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 WS_RS09860 28c180ae687ddc41e92a54916254d991 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 209 5.3E-20 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 WS_RS09860 28c180ae687ddc41e92a54916254d991 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 11-11-2016 IPR000540 Flagellar motor protein MotA, conserved site WS_RS03430 66ab7f3b959c0e2d2399f6a036a7d168 187 Gene3D G3DSA:3.30.70.20 102 134 8.1E-9 T 11-11-2016 WS_RS03430 66ab7f3b959c0e2d2399f6a036a7d168 187 Gene3D G3DSA:3.30.70.20 135 186 3.2E-31 T 11-11-2016 WS_RS03430 66ab7f3b959c0e2d2399f6a036a7d168 187 Gene3D G3DSA:3.30.70.20 1 62 3.2E-31 T 11-11-2016 WS_RS03430 66ab7f3b959c0e2d2399f6a036a7d168 187 SUPERFAMILY SSF54862 1 186 3.14E-60 T 11-11-2016 WS_RS03430 66ab7f3b959c0e2d2399f6a036a7d168 187 Gene3D G3DSA:3.30.70.20 63 101 3.9E-15 T 11-11-2016 WS_RS03430 66ab7f3b959c0e2d2399f6a036a7d168 187 Pfam PF13247 4Fe-4S dicluster domain 56 153 2.1E-21 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS03430 66ab7f3b959c0e2d2399f6a036a7d168 187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 96 107 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 5.7E-120 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 SUPERFAMILY SSF69075 313 413 4.18E-13 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 412 2.3E-20 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 SUPERFAMILY SSF51735 162 309 1.27E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 11-11-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 PIRSF PIRSF000445 1 425 5.6E-123 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 7.7E-35 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 SUPERFAMILY SSF69742 1 159 5.1E-38 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 Gene3D G3DSA:3.40.50.720 164 306 2.8E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 173 301 1.4E-29 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase WS_RS07470 720c14161373f66a307b692fd0e0e36a 436 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 413 24.842 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 WS_RS07890 71cad39cc11829b529bd2477d72152d5 216 SUPERFAMILY SSF69572 5 212 9.55E-42 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS07890 71cad39cc11829b529bd2477d72152d5 216 Pfam PF00899 ThiF family 11 132 2.8E-26 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS07890 71cad39cc11829b529bd2477d72152d5 216 Gene3D G3DSA:3.40.50.720 4 213 1.2E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06110 97c5d70d842a1a8534afb8a6908918fd 245 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 103 226 4.9E-31 T 11-11-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 WS_RS06110 97c5d70d842a1a8534afb8a6908918fd 245 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 235 30.876 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic WS_RS06110 97c5d70d842a1a8534afb8a6908918fd 245 SUPERFAMILY SSF55729 75 227 5.79E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS06110 97c5d70d842a1a8534afb8a6908918fd 245 PIRSF PIRSF037208 1 245 2.2E-85 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic WS_RS06110 97c5d70d842a1a8534afb8a6908918fd 245 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 14 82 3.4E-15 T 11-11-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 SUPERFAMILY SSF51569 1 292 1.78E-92 T 11-11-2016 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 SMART SM01130 3 292 5.8E-128 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 9.1E-36 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 9.1E-36 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 9.1E-36 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 9.1E-36 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 290 1.7E-106 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 11-11-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 290 60.465 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 Pfam PF00701 Dihydrodipicolinate synthetase family 5 289 5.3E-88 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 PIRSF PIRSF001365 1 294 2.8E-85 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 166 - T 11-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 WS_RS10460 fa9b5d5d618ae314a319d0e556f2d67c 295 Gene3D G3DSA:3.20.20.70 2 293 2.5E-103 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 Pfam PF13393 Histidyl-tRNA synthetase 14 334 3.5E-50 T 11-11-2016 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 Gene3D G3DSA:3.30.930.10 7 196 1.2E-94 T 11-11-2016 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 Gene3D G3DSA:3.30.930.10 251 343 1.2E-94 T 11-11-2016 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 SUPERFAMILY SSF55681 10 342 7.08E-79 T 11-11-2016 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 11 428 1.2E-127 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 SUPERFAMILY SSF52954 350 429 1.01E-18 T 11-11-2016 IPR004154 Anticodon-binding WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 PIRSF PIRSF001549 5 440 8.4E-134 T 11-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 7 442 28.08 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 Pfam PF03129 Anticodon binding domain 352 440 1.4E-14 T 11-11-2016 IPR004154 Anticodon-binding WS_RS06915 a581e4b3e48ac395fccc7ac8849f3b51 442 Gene3D G3DSA:3.40.50.800 350 430 4.0E-21 T 11-11-2016 IPR004154 Anticodon-binding WS_RS10220 b98bf7fee306bdc1b3d1168ca08c0944 179 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 125 178 6.8E-13 T 11-11-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal WS_RS10220 b98bf7fee306bdc1b3d1168ca08c0944 179 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 1.0E-14 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 WS_RS10220 b98bf7fee306bdc1b3d1168ca08c0944 179 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 97 1.1E-17 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 WS_RS10220 b98bf7fee306bdc1b3d1168ca08c0944 179 SUPERFAMILY SSF69754 1 105 2.22E-22 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 WS_RS10220 b98bf7fee306bdc1b3d1168ca08c0944 179 Gene3D G3DSA:3.30.160.100 1 98 4.8E-19 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 WS_RS00415 88df25434c9ac099834fc459cebc9201 259 SUPERFAMILY SSF110997 183 255 1.22E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 WS_RS00415 88df25434c9ac099834fc459cebc9201 259 Gene3D G3DSA:3.30.70.1070 182 247 1.1E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 WS_RS00415 88df25434c9ac099834fc459cebc9201 259 Pfam PF05036 Sporulation related domain 182 255 1.3E-12 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 WS_RS06340 476611d38f93dcdd9dce6bf502b9b48b 371 SUPERFAMILY SSF56300 149 368 9.04E-40 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS06340 476611d38f93dcdd9dce6bf502b9b48b 371 Pfam PF00149 Calcineurin-like phosphoesterase 149 312 4.6E-12 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 WS_RS06340 476611d38f93dcdd9dce6bf502b9b48b 371 Gene3D G3DSA:3.60.21.10 148 323 9.6E-27 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS08810 091ccf7c472755262fb13150421f1635 282 Gene3D G3DSA:1.10.3150.10 12 273 1.8E-58 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD WS_RS08810 091ccf7c472755262fb13150421f1635 282 SUPERFAMILY SSF109604 10 267 5.65E-55 T 11-11-2016 WS_RS08810 091ccf7c472755262fb13150421f1635 282 Pfam PF08668 HDOD domain 21 220 3.1E-36 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD WS_RS09950 00d8065914a10dff3325866273bf72de 339 Gene3D G3DSA:3.20.20.70 3 264 6.8E-105 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS09950 00d8065914a10dff3325866273bf72de 339 SUPERFAMILY SSF51569 4 290 1.04E-88 T 11-11-2016 WS_RS09950 00d8065914a10dff3325866273bf72de 339 Gene3D G3DSA:3.90.1210.10 281 337 7.7E-25 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 WS_RS09950 00d8065914a10dff3325866273bf72de 339 Pfam PF08666 SAF domain 281 338 5.7E-12 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 WS_RS09950 00d8065914a10dff3325866273bf72de 339 SMART SM00858 280 338 4.8E-10 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 WS_RS09950 00d8065914a10dff3325866273bf72de 339 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 7 332 1.6E-158 T 11-11-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 WS_RS09950 00d8065914a10dff3325866273bf72de 339 Pfam PF03102 NeuB family 28 266 1.9E-94 T 11-11-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 WS_RS09950 00d8065914a10dff3325866273bf72de 339 SUPERFAMILY SSF51269 277 337 6.8E-19 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 44.721 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 Gene3D G3DSA:3.50.50.60 5 38 1.3E-4 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 6.0E-75 T 11-11-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 SUPERFAMILY SSF51735 4 184 3.95E-72 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 Gene3D G3DSA:1.10.1040.10 39 327 7.1E-112 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 1.8E-64 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 SUPERFAMILY SSF48179 185 334 4.76E-70 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 WS_RS08820 e9cd616d0a45028d01ace7fe6108309e 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 17 328 9.7E-134 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 WS_RS09000 df141838e75aa50155005b5c506997a8 233 Pfam PF05175 Methyltransferase small domain 29 110 5.4E-9 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 WS_RS09000 df141838e75aa50155005b5c506997a8 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 100 106 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 WS_RS09000 df141838e75aa50155005b5c506997a8 233 Gene3D G3DSA:3.40.50.150 15 222 5.0E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS09000 df141838e75aa50155005b5c506997a8 233 SUPERFAMILY SSF53335 3 178 5.58E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02385 a80651e97c299985570975875276271e 198 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 31 153 1.5E-41 T 11-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02385 a80651e97c299985570975875276271e 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 116 127 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS02385 a80651e97c299985570975875276271e 198 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 22 180 25.182 T 11-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02385 a80651e97c299985570975875276271e 198 Pfam PF12838 4Fe-4S dicluster domain 76 128 2.4E-10 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS02385 a80651e97c299985570975875276271e 198 SUPERFAMILY SSF54862 49 149 7.95E-22 T 11-11-2016 WS_RS02385 a80651e97c299985570975875276271e 198 Gene3D G3DSA:3.30.70.20 45 132 4.3E-16 T 11-11-2016 WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 SMART SM00382 375 561 1.2E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 Pfam PF00005 ABC transporter 367 513 4.8E-36 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 Gene3D G3DSA:1.20.1560.10 11 318 5.0E-18 T 11-11-2016 WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 Pfam PF00664 ABC transporter transmembrane region 17 295 2.7E-9 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 SUPERFAMILY SSF90123 9 318 1.31E-28 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 SUPERFAMILY SSF90123 489 498 1.31E-28 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 Gene3D G3DSA:3.40.50.300 350 562 1.4E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00250 f1fa69d49ac6b35abb0b6fe37067110b 563 SUPERFAMILY SSF52540 345 562 2.61E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 SUPERFAMILY SSF51735 163 404 1.09E-76 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 11-11-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 SMART SM01274 18 151 2.4E-82 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 Gene3D G3DSA:3.40.50.720 161 403 8.1E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 9.1E-29 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 SMART SM00919 163 396 1.1E-123 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 Pfam PF03949 Malic enzyme, NAD binding domain 165 352 1.1E-19 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 Gene3D G3DSA:3.40.50.10380 13 160 6.8E-53 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 WS_RS00855 21dc60a37d388b242e9d74a8a307c3bb 406 SUPERFAMILY SSF53223 13 161 7.91E-54 T 11-11-2016 WS_RS08620 7ce1109998bb26ed0b97f3f7c328e70b 148 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 141 1.4E-20 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS08620 7ce1109998bb26ed0b97f3f7c328e70b 148 Gene3D G3DSA:3.40.50.1450 4 139 5.0E-11 T 11-11-2016 IPR023430 Peptidase HybD-like domain WS_RS08620 7ce1109998bb26ed0b97f3f7c328e70b 148 SUPERFAMILY SSF53163 2 142 2.28E-19 T 11-11-2016 IPR023430 Peptidase HybD-like domain WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 SUPERFAMILY SSF55874 240 397 3.67E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 SMART SM00448 10 123 1.3E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 SUPERFAMILY SSF47384 164 238 2.75E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 SUPERFAMILY SSF52172 10 148 1.05E-42 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 SMART SM00388 169 241 0.0023 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 Pfam PF00072 Response regulator receiver domain 12 123 4.3E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 Gene3D G3DSA:1.10.287.130 166 235 7.1E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 Gene3D G3DSA:3.30.565.10 246 397 1.9E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 Gene3D G3DSA:3.40.50.2300 5 136 7.8E-43 T 11-11-2016 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 SMART SM00387 282 399 6.2E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 396 1.7E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 4.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 4.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 4.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04690 c56f3eb1aa3a680cc9ef6cfe2afcdcf8 401 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 4.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 SUPERFAMILY SSF52218 259 398 3.33E-31 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 Pfam PF00258 Flavodoxin 262 389 8.4E-8 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 Gene3D G3DSA:3.40.50.360 258 397 1.4E-38 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 Pfam PF00753 Metallo-beta-lactamase superfamily 35 231 7.0E-11 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 PIRSF PIRSF005243 1 403 1.5E-131 T 11-11-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 Gene3D G3DSA:3.60.15.10 5 245 9.2E-82 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 SUPERFAMILY SSF56281 5 288 3.8E-46 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS00815 ddfaeac1f889585cc25227e973aa3871 403 SMART SM00849 33 229 7.1E-29 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS07690 85224b6e4ef6b2faca00f04f46ce4790 713 SUPERFAMILY SSF55073 451 642 5.18E-56 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS07690 85224b6e4ef6b2faca00f04f46ce4790 713 Gene3D G3DSA:3.30.70.1230 454 641 4.7E-45 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 WS_RS07690 85224b6e4ef6b2faca00f04f46ce4790 713 Pfam PF05226 CHASE2 domain 19 352 1.9E-60 T 11-11-2016 IPR007890 CHASE2 WS_RS07690 85224b6e4ef6b2faca00f04f46ce4790 713 SMART SM01080 29 357 4.3E-85 T 11-11-2016 IPR007890 CHASE2 WS_RS07690 85224b6e4ef6b2faca00f04f46ce4790 713 SMART SM00044 417 622 3.1E-21 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 WS_RS07690 85224b6e4ef6b2faca00f04f46ce4790 713 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 456 636 3.5E-32 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 Pfam PF03441 FAD binding domain of DNA photolyase 253 438 1.4E-70 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 Gene3D G3DSA:1.10.579.10 262 440 3.1E-68 T 11-11-2016 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 SUPERFAMILY SSF48173 195 443 5.76E-85 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 Gene3D G3DSA:1.25.40.80 186 261 2.7E-24 T 11-11-2016 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 Gene3D G3DSA:1.25.40.80 135 149 2.7E-24 T 11-11-2016 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 SUPERFAMILY SSF52425 3 182 4.71E-36 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 Gene3D G3DSA:3.40.50.620 3 134 9.5E-33 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 PRINTS PR00147 DNA photolyase signature 300 316 6.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 PRINTS PR00147 DNA photolyase signature 320 338 6.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 PRINTS PR00147 DNA photolyase signature 359 373 6.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 PRINTS PR00147 DNA photolyase signature 130 146 6.8E-20 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 WS_RS07305 5e29fd1aef91c2fcd012bcb4457155e9 447 Pfam PF00875 DNA photolyase 3 150 9.1E-30 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SUPERFAMILY SSF51126 21 390 9.98E-69 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 21 402 7.5E-135 T 11-11-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00722 28 175 3.8E-4 T 11-11-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 198 233 4.0E-6 T 11-11-2016 IPR022441 Parallel beta-helix repeat-2 WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 150 184 1.8E-5 T 11-11-2016 IPR022441 Parallel beta-helix repeat-2 WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 Pfam PF05048 Periplasmic copper-binding protein (NosD) 134 364 7.7E-53 T 11-11-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 Gene3D G3DSA:2.160.20.10 18 310 1.1E-36 T 11-11-2016 IPR012334 Pectin lyase fold WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00710 155 183 750.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00710 198 219 250.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00710 220 245 2300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00710 246 267 50.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00710 273 294 1400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00710 75 103 5000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat WS_RS04405 221802443e5c44ea880cb81993b78cc1 405 SMART SM00710 104 125 650.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat WS_RS04870 6a4b7dc4bcb6f4c309c85e3281a6a853 407 SUPERFAMILY SSF53383 3 406 2.66E-94 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS04870 6a4b7dc4bcb6f4c309c85e3281a6a853 407 Gene3D G3DSA:3.40.640.10 3 273 1.5E-82 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS04870 6a4b7dc4bcb6f4c309c85e3281a6a853 407 PIRSF PIRSF001434 1 407 2.8E-124 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 WS_RS04870 6a4b7dc4bcb6f4c309c85e3281a6a853 407 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 406 1.4E-107 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 WS_RS04870 6a4b7dc4bcb6f4c309c85e3281a6a853 407 Gene3D G3DSA:3.90.1150.10 275 406 5.4E-36 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 SUPERFAMILY SSF56327 146 309 3.46E-47 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 145 3.2E-34 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 4.7E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 4.7E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 4.7E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 4.7E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 4.7E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 PIRSF PIRSF000102 1 313 5.8E-103 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 Gene3D G3DSA:3.40.50.720 3 146 2.8E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 310 40.365 T 11-11-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 150 308 6.1E-25 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 Gene3D G3DSA:3.90.110.10 147 309 1.2E-51 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 WS_RS05110 e5043c6512399d775e7a68ee03e0c0e7 320 SUPERFAMILY SSF51735 6 146 1.17E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00140 a1678e294676238731230dc45be9e91a 306 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 109 301 2.3E-51 T 11-11-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 WS_RS00140 a1678e294676238731230dc45be9e91a 306 Gene3D G3DSA:1.20.950.20 105 305 7.4E-46 T 11-11-2016 WS_RS00140 a1678e294676238731230dc45be9e91a 306 Pfam PF01292 Prokaryotic cytochrome b561 113 280 8.0E-18 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 WS_RS00140 a1678e294676238731230dc45be9e91a 306 SUPERFAMILY SSF81342 106 305 4.87E-35 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 WS_RS03545 a1678e294676238731230dc45be9e91a 306 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 109 301 2.3E-51 T 11-11-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 WS_RS03545 a1678e294676238731230dc45be9e91a 306 Gene3D G3DSA:1.20.950.20 105 305 7.4E-46 T 11-11-2016 WS_RS03545 a1678e294676238731230dc45be9e91a 306 Pfam PF01292 Prokaryotic cytochrome b561 113 280 8.0E-18 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 WS_RS03545 a1678e294676238731230dc45be9e91a 306 SUPERFAMILY SSF81342 106 305 4.87E-35 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 WS_RS05500 a1678e294676238731230dc45be9e91a 306 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 109 301 2.3E-51 T 11-11-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 WS_RS05500 a1678e294676238731230dc45be9e91a 306 Gene3D G3DSA:1.20.950.20 105 305 7.4E-46 T 11-11-2016 WS_RS05500 a1678e294676238731230dc45be9e91a 306 Pfam PF01292 Prokaryotic cytochrome b561 113 280 8.0E-18 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 WS_RS05500 a1678e294676238731230dc45be9e91a 306 SUPERFAMILY SSF81342 106 305 4.87E-35 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 SUPERFAMILY SSF58104 470 682 2.62E-52 T 11-11-2016 WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 SUPERFAMILY SSF58104 365 395 2.62E-52 T 11-11-2016 WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 SUPERFAMILY SSF103190 125 213 3.92E-10 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 Gene3D G3DSA:3.30.450.20 187 310 4.7E-11 T 11-11-2016 WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 Gene3D G3DSA:1.10.287.950 484 676 1.1E-45 T 11-11-2016 WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 523 614 3.0E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 SMART SM00283 467 680 7.4E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05780 66aa14cbded61b4cabe7c202bd7a7e7a 684 Pfam PF17201 Cache 3/Cache 2 fusion domain 35 312 7.8E-73 T 11-11-2016 IPR033462 Cache 3/Cache 2 fusion domain WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 Gene3D G3DSA:3.30.470.20 208 308 2.9E-19 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 Gene3D G3DSA:3.30.470.20 119 144 2.9E-19 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 Gene3D G3DSA:3.40.50.20 2 117 8.1E-17 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 275 302 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 SUPERFAMILY SSF52440 2 127 1.44E-26 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 343 28.119 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 Gene3D G3DSA:3.30.1490.20 153 204 2.2E-15 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 Pfam PF07478 D-ala D-ala ligase C-terminus 156 303 3.2E-28 T 11-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 SUPERFAMILY SSF56059 128 309 1.31E-31 T 11-11-2016 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 Pfam PF01820 D-ala D-ala ligase N-terminus 2 117 1.1E-16 T 11-11-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS02145 45a5a2c3f7ab0fd9dfa15f2c221b9e9a 345 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 324 2.3E-84 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 Gene3D G3DSA:3.30.470.20 207 446 7.0E-102 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 326 1.3E-81 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 SMART SM00878 339 444 1.3E-62 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 Gene3D G3DSA:3.40.50.20 6 133 2.4E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 114 3.9E-40 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 SUPERFAMILY SSF51246 334 445 3.51E-43 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 SUPERFAMILY SSF52440 4 117 1.94E-43 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 Pfam PF02785 Biotin carboxylase C-terminal domain 339 445 1.0E-39 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 6 446 1.4E-202 T 11-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 SUPERFAMILY SSF56059 87 355 1.64E-69 T 11-11-2016 WS_RS05155 ac7e6281dd1f970ab53d36aa511aabe6 448 Gene3D G3DSA:3.30.1490.20 134 206 2.0E-29 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS04290 45572e3c519365538ea3257a5c815d5a 230 Gene3D G3DSA:3.40.50.2020 9 68 1.7E-19 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS04290 45572e3c519365538ea3257a5c815d5a 230 Gene3D G3DSA:3.40.50.2020 100 199 1.7E-19 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS04290 45572e3c519365538ea3257a5c815d5a 230 Pfam PF00156 Phosphoribosyl transferase domain 25 173 1.5E-15 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 WS_RS04290 45572e3c519365538ea3257a5c815d5a 230 SUPERFAMILY SSF53271 9 216 1.09E-35 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 Pfam PF01455 HupF/HypC family 1 67 1.8E-23 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 SUPERFAMILY SSF159127 1 81 2.75E-24 T 11-11-2016 WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 59 71 7.2E-12 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 7.2E-12 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 7.2E-12 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 41 57 7.2E-12 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 80 7.4E-27 T 11-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC WS_RS03800 17f3a38b29e800626cdd48be584569f8 87 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 11-11-2016 IPR019812 Hydrogenase assembly chaperone, conserved site WS_RS01110 d8f99d9d01f6d926f0418a52f7b3816e 283 Pfam PF05175 Methyltransferase small domain 114 193 9.1E-13 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 WS_RS01110 d8f99d9d01f6d926f0418a52f7b3816e 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 269 5.4E-68 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 WS_RS01110 d8f99d9d01f6d926f0418a52f7b3816e 283 SUPERFAMILY SSF53335 3 228 2.09E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS01110 d8f99d9d01f6d926f0418a52f7b3816e 283 Gene3D G3DSA:1.10.8.10 1 86 1.3E-25 T 11-11-2016 WS_RS01110 d8f99d9d01f6d926f0418a52f7b3816e 283 Gene3D G3DSA:3.40.50.150 88 272 9.9E-47 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS01110 d8f99d9d01f6d926f0418a52f7b3816e 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 274 3.1E-67 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 WS_RS01110 d8f99d9d01f6d926f0418a52f7b3816e 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 Pfam PF02910 Fumarate reductase flavoprotein C-term 487 613 1.0E-30 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 49 68 1.2E-6 T 11-11-2016 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 415 1.2E-6 T 11-11-2016 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 48 613 6.8E-195 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 SUPERFAMILY SSF46977 483 613 2.62E-36 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 SUPERFAMILY SSF51905 392 451 2.17E-66 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 SUPERFAMILY SSF51905 42 293 2.17E-66 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 Gene3D G3DSA:4.10.80.40 568 609 1.7E-14 T 11-11-2016 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 SUPERFAMILY SSF56425 270 388 1.17E-37 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 Gene3D G3DSA:3.90.700.10 277 382 1.2E-35 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 PIRSF PIRSF000171 40 611 1.2E-39 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 Gene3D G3DSA:3.50.50.60 384 448 3.2E-93 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 Gene3D G3DSA:3.50.50.60 46 276 3.2E-93 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 Pfam PF00890 FAD binding domain 48 430 1.2E-94 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09025 82d9ef7022083f6322c6a12ffc135c2a 613 Gene3D G3DSA:1.20.58.100 466 567 1.2E-25 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 Pfam PF00117 Glutamine amidotransferase class-I 13 196 2.0E-44 T 11-11-2016 IPR017926 Glutamine amidotransferase WS_RS07565 b917bfbd0685338113bc43138e74f766 521 Gene3D G3DSA:3.40.50.620 205 393 1.8E-58 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS07565 b917bfbd0685338113bc43138e74f766 521 Gene3D G3DSA:3.30.300.10 397 521 3.6E-50 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 8 521 54.017 T 11-11-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 55 64 5.8E-8 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 5.8E-8 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 5.8E-8 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 202 5.8E-77 T 11-11-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 521 2.4E-151 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 Pfam PF00958 GMP synthase C terminal domain 429 520 4.0E-43 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 PRINTS PR00097 Anthranilate synthase component II signature 55 64 2.3E-6 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 PRINTS PR00097 Anthranilate synthase component II signature 174 187 2.3E-6 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 PRINTS PR00097 Anthranilate synthase component II signature 82 93 2.3E-6 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 SUPERFAMILY SSF52402 191 442 7.94E-55 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 Gene3D G3DSA:3.40.50.880 9 202 2.1E-69 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS07565 b917bfbd0685338113bc43138e74f766 521 SUPERFAMILY SSF54810 401 521 7.85E-50 T 11-11-2016 WS_RS07565 b917bfbd0685338113bc43138e74f766 521 SUPERFAMILY SSF52317 11 234 3.37E-59 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 SUPERFAMILY SSF57802 174 211 6.39E-11 T 11-11-2016 WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 Pfam PF02915 Rubrerythrin 44 163 6.3E-21 T 11-11-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 SUPERFAMILY SSF57802 1 36 5.73E-11 T 11-11-2016 WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 Gene3D G3DSA:2.60.40.730 1 37 3.4E-7 T 11-11-2016 WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 Gene3D G3DSA:2.20.28.10 173 211 9.7E-17 T 11-11-2016 IPR004039 Rubredoxin-type fold WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 SUPERFAMILY SSF47240 36 171 7.68E-34 T 11-11-2016 IPR009078 Ferritin-like superfamily WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 Gene3D G3DSA:1.20.1260.10 38 169 5.2E-41 T 11-11-2016 IPR012347 Ferritin-related WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 8.3E-12 T 11-11-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 WS_RS06555 cb3d6cc31fb891c1eb50a0ffc7326dfb 215 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 1.2E-12 T 11-11-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 PIRSF PIRSF000382 4 757 0.0 T 11-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 SUPERFAMILY SSF51726 9 374 1.11E-82 T 11-11-2016 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 3.9E-140 T 11-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 10 755 3.9E-285 T 11-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 Gene3D G3DSA:3.20.20.210 7 365 2.8E-107 T 11-11-2016 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 8 309 8.0E-102 T 11-11-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 SUPERFAMILY SSF51726 405 754 9.16E-107 T 11-11-2016 WS_RS01330 0b034df7bfc1e849fa8b9e4fcdfe9372 757 Gene3D G3DSA:3.20.20.210 404 755 3.8E-117 T 11-11-2016 WS_RS09715 01d70773ce14b69769400fec215ffc1d 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 376 3.7E-42 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 WS_RS09715 01d70773ce14b69769400fec215ffc1d 403 Pfam PF02441 Flavoprotein 8 135 1.2E-33 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 WS_RS09715 01d70773ce14b69769400fec215ffc1d 403 SUPERFAMILY SSF102645 172 402 5.23E-53 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 WS_RS09715 01d70773ce14b69769400fec215ffc1d 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 7 400 1.1E-108 T 11-11-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 WS_RS09715 01d70773ce14b69769400fec215ffc1d 403 Gene3D G3DSA:3.40.50.1950 7 185 1.5E-62 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 WS_RS09715 01d70773ce14b69769400fec215ffc1d 403 Gene3D G3DSA:3.40.50.10300 186 402 1.4E-49 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 WS_RS09715 01d70773ce14b69769400fec215ffc1d 403 SUPERFAMILY SSF52507 4 181 3.66E-53 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 SUPERFAMILY SSF46785 1 78 3.85E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 8.1E-17 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 Gene3D G3DSA:1.10.10.10 2 78 1.2E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 SMART SM00418 6 86 3.9E-22 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.4E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 2.4E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 2.4E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03610 3972945ee92edb20ec79fe396176f2eb 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 2.4E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS01485 502959a05d8fba0ec067a85649da926c 397 Pfam PF00202 Aminotransferase class-III 23 394 1.1E-89 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS01485 502959a05d8fba0ec067a85649da926c 397 Gene3D G3DSA:3.40.640.10 58 298 5.1E-71 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS01485 502959a05d8fba0ec067a85649da926c 397 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS01485 502959a05d8fba0ec067a85649da926c 397 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 395 40.215 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 WS_RS01485 502959a05d8fba0ec067a85649da926c 397 SUPERFAMILY SSF53383 14 395 7.12E-101 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS01485 502959a05d8fba0ec067a85649da926c 397 Gene3D G3DSA:3.90.1150.10 302 395 2.2E-26 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS01485 502959a05d8fba0ec067a85649da926c 397 Gene3D G3DSA:3.90.1150.10 10 57 2.2E-26 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 Gene3D G3DSA:1.10.10.200 1 75 3.3E-27 T 11-11-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 SUPERFAMILY SSF75625 1 236 1.83E-75 T 11-11-2016 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 Gene3D G3DSA:3.30.1270.10 211 236 1.5E-29 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 Gene3D G3DSA:3.30.1270.10 80 133 1.5E-29 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 Gene3D G3DSA:3.30.70.980 134 202 3.6E-27 T 11-11-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 Pfam PF01709 Transcriptional regulator 5 236 1.7E-74 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 26.597 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS04890 b1235ad0c7666c1d6d82340f20a78bf8 237 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 236 4.2E-79 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 SUPERFAMILY SSF82866 801 1021 1.01E-42 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 Gene3D G3DSA:1.10.3850.10 809 1017 1.1E-44 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 SUPERFAMILY SSF82693 264 309 1.94E-7 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 SUPERFAMILY SSF82693 136 179 1.94E-7 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 Gene3D G3DSA:3.30.70.1430 43 131 8.2E-15 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 Gene3D G3DSA:3.30.2090.10 180 263 8.0E-7 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 Gene3D G3DSA:3.30.70.1320 144 176 1.4E-4 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 Gene3D G3DSA:3.30.70.1320 266 295 1.4E-4 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 Gene3D G3DSA:1.20.1640.10 296 493 1.4E-45 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 SUPERFAMILY SSF82866 290 481 2.88E-36 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 SUPERFAMILY SSF82693 42 131 4.97E-14 T 11-11-2016 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 SUPERFAMILY SSF82714 181 263 1.31E-7 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 1.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 PRINTS PR00702 Acriflavin resistance protein family signature 457 480 1.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 1.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 1.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS00840 f1383d8a26b4837ec757a0c79f047268 1049 Pfam PF00873 AcrB/AcrD/AcrF family 3 1016 4.7E-142 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 Gene3D G3DSA:3.30.450.40 15 184 4.4E-50 T 11-11-2016 IPR029016 GAF domain-like WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 Pfam PF01966 HD domain 207 327 7.9E-23 T 11-11-2016 IPR006674 HD domain WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 SUPERFAMILY SSF55781 20 188 6.11E-41 T 11-11-2016 IPR029016 GAF domain-like WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 SMART SM00065 37 183 1.0E-24 T 11-11-2016 IPR003018 GAF domain GO:0005515 WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 Gene3D G3DSA:1.10.3210.10 185 359 2.0E-22 T 11-11-2016 IPR006674 HD domain WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 Pfam PF01590 GAF domain 38 168 7.5E-13 T 11-11-2016 IPR003018 GAF domain GO:0005515 WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 SMART SM00471 200 337 4.1E-9 T 11-11-2016 IPR003607 HD/PDEase domain WS_RS07675 35f0f2947e450e1c230148c318c877b1 380 SUPERFAMILY SSF109604 181 368 1.13E-40 T 11-11-2016 WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.866 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 SUPERFAMILY SSF47060 3 89 1.91E-32 T 11-11-2016 IPR009068 S15/NS1, RNA-binding WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 9.0E-39 T 11-11-2016 WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 8 88 1.1E-35 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 Gene3D G3DSA:1.10.287.10 3 89 6.1E-35 T 11-11-2016 IPR009068 S15/NS1, RNA-binding WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 Pfam PF00312 Ribosomal protein S15 8 88 9.4E-34 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 SMART SM01387 8 88 6.1E-47 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS05065 151a016a91a2fb4cd57c8a456f475330 90 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 Gene3D G3DSA:3.40.1060.10 510 672 9.8E-81 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 Pfam PF11791 Aconitate B N-terminal domain 6 158 9.2E-60 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 Gene3D G3DSA:3.30.499.10 673 847 4.9E-49 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 3 848 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 Pfam PF00330 Aconitase family (aconitate hydratase) 461 812 7.1E-43 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 SUPERFAMILY SSF53732 369 847 7.72E-142 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 Gene3D G3DSA:3.20.19.10 164 351 8.0E-82 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 PIRSF PIRSF036687 1 852 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 ProSitePatterns PS01244 Aconitase family signature 2. 755 768 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 SUPERFAMILY SSF74778 3 162 1.23E-58 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 Pfam PF06434 Aconitate hydratase 2 N-terminus 170 372 4.0E-94 T 11-11-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 SUPERFAMILY SSF52016 165 362 1.1E-61 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 ProSitePatterns PS00450 Aconitase family signature 1. 697 714 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 WS_RS05680 bfd1422e4752a02000429966a1ceb492 853 Gene3D G3DSA:3.30.499.10 392 509 1.8E-58 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 390 3.8E-14 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 Gene3D G3DSA:1.10.8.60 312 410 3.8E-34 T 11-11-2016 WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 SUPERFAMILY SSF52540 58 398 2.43E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 SUPERFAMILY SSF57716 5 39 6.41E-8 T 11-11-2016 WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 405 7.0E-191 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 306 2.5E-48 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 1 409 48.25 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 SMART SM00994 3 42 5.2E-15 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 SMART SM01086 312 407 6.1E-28 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 Gene3D G3DSA:3.40.50.300 289 306 1.5E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 Gene3D G3DSA:3.40.50.300 61 252 1.5E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 SMART SM00382 110 260 1.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00275 009d17d1ab463eb62efdbdf0f2adb731 417 Pfam PF06689 ClpX C4-type zinc finger 5 39 2.2E-12 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 489 2.9E-195 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 Pfam PF01676 Metalloenzyme superfamily 4 482 5.4E-72 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 SUPERFAMILY SSF53649 296 488 1.44E-67 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 SUPERFAMILY SSF53649 3 76 1.44E-67 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 PIRSF PIRSF001492 1 492 1.3E-188 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 Gene3D G3DSA:3.40.1450.10 77 296 2.2E-73 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 Gene3D G3DSA:3.40.720.10 4 76 1.5E-75 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 Gene3D G3DSA:3.40.720.10 300 488 1.5E-75 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 492 43.447 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 SUPERFAMILY SSF64158 76 295 1.7E-71 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS09605 7ea5c020bfbd9ff158e0a64de88be346 492 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 285 6.8E-61 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 SUPERFAMILY SSF52540 5 192 4.27E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 SUPERFAMILY SSF50465 268 356 8.39E-12 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 Pfam PF09107 Elongation factor SelB, winged helix 564 608 5.5E-13 T 11-11-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 Pfam PF00009 Elongation factor Tu GTP binding domain 5 137 1.2E-28 T 11-11-2016 WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 Gene3D G3DSA:1.10.10.10 555 610 2.2E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 Gene3D G3DSA:3.40.50.300 5 166 4.6E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 5 610 3.8E-100 T 11-11-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 SUPERFAMILY SSF50447 177 260 3.74E-15 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 SUPERFAMILY SSF46785 560 610 4.84E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 Gene3D G3DSA:2.40.30.10 178 295 5.0E-22 T 11-11-2016 WS_RS04025 0cca9043f706b9fb6c2194d5dd8122f9 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 139 3.5E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 SUPERFAMILY SSF55008 3 69 9.69E-15 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 144 720 2.7E-163 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 SUPERFAMILY SSF81660 413 542 8.83E-15 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 Pfam PF00122 E1-E2 ATPase 183 402 1.3E-62 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 SUPERFAMILY SSF81665 182 215 9.15E-13 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 SUPERFAMILY SSF81665 312 403 9.15E-13 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 Gene3D G3DSA:3.40.50.1000 533 680 1.4E-41 T 11-11-2016 IPR023214 HAD-like domain WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 Gene3D G3DSA:3.40.50.1000 385 427 1.4E-41 T 11-11-2016 IPR023214 HAD-like domain WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 Pfam PF00702 haloacid dehalogenase-like hydrolase 410 626 1.9E-29 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 Gene3D G3DSA:3.30.70.100 2 79 1.1E-17 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 SUPERFAMILY SSF56784 410 430 5.33E-48 T 11-11-2016 IPR023214 HAD-like domain WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 SUPERFAMILY SSF56784 529 719 5.33E-48 T 11-11-2016 IPR023214 HAD-like domain WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 Pfam PF00403 Heavy-metal-associated domain 6 66 7.5E-10 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 126 720 4.8E-153 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 ProSitePatterns PS01229 Hypothetical cof family signature 2. 612 634 - T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 411 425 6.8E-20 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 570 6.8E-20 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 631 6.8E-20 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 261 275 6.8E-20 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 647 6.8E-20 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 SUPERFAMILY SSF81653 214 310 1.44E-19 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 413 419 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 184 689 1.9E-78 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00943 Copper-transporting ATPase signature 590 607 9.2E-8 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00943 Copper-transporting ATPase signature 47 67 9.2E-8 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00943 Copper-transporting ATPase signature 181 200 9.2E-8 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 PRINTS PR00943 Copper-transporting ATPase signature 334 348 9.2E-8 T 11-11-2016 WS_RS02075 9b98af747eaa5842023cbe15778c3c19 732 Gene3D G3DSA:2.70.150.10 164 312 7.3E-21 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 964 1074 4.6E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF55874 906 1073 4.85E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 583 798 3.3E-34 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 332 553 1.3E-39 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS10585 d967568390162e256a85a749c5c1f135 1555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1019 1029 1.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1001 1015 1.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1036 1054 1.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1060 1073 1.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF53850 582 802 9.07E-46 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.190.10 409 499 5.9E-14 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.190.10 658 757 1.2E-12 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF52172 1088 1211 2.85E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF47384 837 918 1.9E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SMART SM00387 964 1076 2.4E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF53850 328 555 4.47E-46 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.190.10 761 801 1.3E-18 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.190.10 582 657 1.3E-18 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.190.10 515 553 8.4E-24 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.190.10 330 408 8.4E-24 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.190.10 107 227 5.6E-10 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF01627 Hpt domain 1414 1471 4.9E-7 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF00512 His Kinase A (phospho-acceptor) domain 853 917 4.2E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF00072 Response regulator receiver domain 1092 1203 9.5E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF00072 Response regulator receiver domain 1238 1346 7.5E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.50.2300 1235 1355 4.7E-37 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF47226 1382 1470 1.44E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:1.10.287.130 844 913 1.1E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SMART SM00448 1090 1205 2.0E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SMART SM00448 1236 1349 5.8E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:1.20.120.160 1378 1470 2.1E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SMART SM00388 852 917 2.4E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SMART SM00062 331 555 2.7E-28 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SMART SM00062 580 801 1.4E-30 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Pfam PF09084 NMT1/THI5 like 34 240 2.4E-52 T 11-11-2016 IPR015168 SsuA/THI5-like WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.40.50.2300 1089 1221 1.5E-35 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF53850 27 254 3.73E-29 T 11-11-2016 WS_RS10585 d967568390162e256a85a749c5c1f135 1555 Gene3D G3DSA:3.30.565.10 918 1081 5.6E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10585 d967568390162e256a85a749c5c1f135 1555 SUPERFAMILY SSF52172 1237 1405 2.28E-36 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS07535 4a674eb6db015a660e2ef08017fb60a0 204 Gene3D G3DSA:3.40.50.880 2 202 2.6E-48 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS07535 4a674eb6db015a660e2ef08017fb60a0 204 SUPERFAMILY SSF52317 1 200 1.83E-24 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS07535 4a674eb6db015a660e2ef08017fb60a0 204 Pfam PF03575 Peptidase family S51 9 201 1.1E-59 T 11-11-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 WS_RS00170 0bb60bd93e0605a851f904b141242cae 153 SUPERFAMILY SSF55729 13 148 4.65E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00170 0bb60bd93e0605a851f904b141242cae 153 Gene3D G3DSA:3.40.630.30 11 147 6.9E-31 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00170 0bb60bd93e0605a851f904b141242cae 153 Pfam PF00583 Acetyltransferase (GNAT) family 61 140 4.0E-18 T 11-11-2016 IPR000182 GNAT domain GO:0008080 WS_RS02985 ac481415480c1f753a24611c4d9d8c69 176 SUPERFAMILY SSF52507 2 176 4.71E-51 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 WS_RS02985 ac481415480c1f753a24611c4d9d8c69 176 Pfam PF02441 Flavoprotein 2 118 2.2E-25 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 WS_RS02985 ac481415480c1f753a24611c4d9d8c69 176 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 175 2.8E-46 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 WS_RS02985 ac481415480c1f753a24611c4d9d8c69 176 Gene3D G3DSA:3.40.50.1950 2 176 1.5E-63 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 SMART SM00322 60 125 4.1E-8 T 11-11-2016 IPR004087 K Homology domain GO:0003676 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 SUPERFAMILY SSF54814 2 106 6.54E-36 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 Gene3D G3DSA:3.30.300.20 17 107 2.2E-30 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 1.0E-95 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 SUPERFAMILY SSF54821 107 206 4.58E-40 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 Pfam PF07650 KH domain 38 110 4.5E-20 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-11-2016 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 Gene3D G3DSA:3.30.1140.32 109 207 4.7E-45 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 202 9.6E-40 T 11-11-2016 WS_RS08055 cd651cacfbd049f77eb86f909258e7dc 236 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.428 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 WS_RS04920 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS04920 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS04920 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS04920 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS04920 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04920 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04920 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS05890 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS05890 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS05890 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS05890 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS05890 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05890 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05890 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06040 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS06040 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS06040 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06040 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS06040 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS06040 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS06040 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS04390 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS04390 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS04390 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS04390 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS04390 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04390 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04390 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS05330 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS05330 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS05330 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS05330 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS05330 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05330 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05330 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS09200 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS09200 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS09200 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS09200 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS09200 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS09200 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS09200 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS05190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS05190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS05190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS05190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS05190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS08190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS08190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS08190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS08190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS08190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS08190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS08190 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS04615 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS04615 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS04615 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS04615 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS04615 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04615 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04615 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06490 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS06490 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS06490 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06490 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS06490 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS06490 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS06490 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS03570 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS03570 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS03570 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS03570 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS03570 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03570 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03570 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS01385 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF01527 Transposase 3 76 1.5E-11 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS01385 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF00665 Integrase core domain 223 333 8.0E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS01385 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF53098 221 382 6.83E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS01385 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Pfam PF13276 HTH-like domain 143 199 1.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS01385 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:1.10.10.60 9 81 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01385 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 SUPERFAMILY SSF46689 4 83 9.14E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01385 dd7a0cc4d23c81e36f4aa6a8c1b54c85 384 Gene3D G3DSA:3.30.420.10 217 373 1.7E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS01320 86a08f7c01c141194536b51ddffccb69 461 Gene3D G3DSA:1.10.45.10 420 459 5.1E-15 T 11-11-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 WS_RS01320 86a08f7c01c141194536b51ddffccb69 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 458 3.3E-63 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 WS_RS01320 86a08f7c01c141194536b51ddffccb69 461 SUPERFAMILY SSF56176 5 217 7.94E-70 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 WS_RS01320 86a08f7c01c141194536b51ddffccb69 461 Gene3D G3DSA:3.30.43.10 2 96 1.8E-31 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 WS_RS01320 86a08f7c01c141194536b51ddffccb69 461 Pfam PF01565 FAD binding domain 40 179 7.7E-42 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 WS_RS01320 86a08f7c01c141194536b51ddffccb69 461 SUPERFAMILY SSF55103 220 460 5.89E-66 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 WS_RS01320 86a08f7c01c141194536b51ddffccb69 461 Gene3D G3DSA:3.30.465.10 97 217 1.6E-41 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 Gene3D G3DSA:2.30.33.40 1 89 3.1E-26 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 SMART SM00883 2 88 7.5E-39 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 Hamap MF_00580 10 kDa chaperonin [groS]. 2 89 20.821 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 Pfam PF00166 Chaperonin 10 Kd subunit 2 88 4.1E-26 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 SUPERFAMILY SSF50129 1 89 8.12E-25 T 11-11-2016 IPR011032 GroES-like WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 PRINTS PR00297 10kDa chaperonin signature 25 46 2.0E-22 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 PRINTS PR00297 10kDa chaperonin signature 3 18 2.0E-22 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 PRINTS PR00297 10kDa chaperonin signature 54 66 2.0E-22 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS01520 feb2f859381976a1c6a5456aec95accb 89 PRINTS PR00297 10kDa chaperonin signature 75 88 2.0E-22 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 WS_RS08990 186c63ea576ea85d48ef8e64c008f081 427 Gene3D G3DSA:1.25.40.10 41 156 2.2E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08990 186c63ea576ea85d48ef8e64c008f081 427 Gene3D G3DSA:1.25.40.10 157 264 2.2E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08990 186c63ea576ea85d48ef8e64c008f081 427 SUPERFAMILY SSF48452 249 399 1.33E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08990 186c63ea576ea85d48ef8e64c008f081 427 SUPERFAMILY SSF48452 41 234 4.67E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08990 186c63ea576ea85d48ef8e64c008f081 427 Gene3D G3DSA:1.25.40.10 320 424 1.3E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Pfam PF01131 DNA topoisomerase 128 541 1.5E-122 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 292 301 1.4E-34 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.4E-34 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 1.4E-34 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 1.4E-34 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-34 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 SMART SM00436 104 192 3.5E-47 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 678 52.811 T 11-11-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 SUPERFAMILY SSF57783 615 653 1.87E-12 T 11-11-2016 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:3.40.50.140 2 129 9.6E-43 T 11-11-2016 IPR006171 Toprim domain WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 602 4.1E-240 T 11-11-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:1.10.460.10 131 185 3.5E-55 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:1.10.460.10 444 552 3.5E-55 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Pfam PF01751 Toprim domain 4 113 9.6E-28 T 11-11-2016 IPR006171 Toprim domain WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:3.30.65.10 570 604 1.2E-13 T 11-11-2016 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:3.30.65.10 655 692 5.5E-10 T 11-11-2016 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:3.30.65.10 615 654 5.9E-18 T 11-11-2016 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 301 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 570 605 9.8E-16 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 663 699 6.9E-15 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 617 654 2.6E-15 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 SMART SM00437 242 504 7.3E-113 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 SUPERFAMILY SSF57783 656 694 1.7E-9 T 11-11-2016 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:2.70.20.10 186 314 8.3E-25 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 Gene3D G3DSA:2.70.20.10 317 443 1.8E-30 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 SMART SM00493 2 103 8.3E-27 T 11-11-2016 IPR006171 Toprim domain WS_RS07140 b03df5a01d335a6b06c27b0d78a5956e 741 SUPERFAMILY SSF56712 2 582 6.54E-177 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.4E-45 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Gene3D G3DSA:3.40.50.20 1 128 4.1E-50 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Gene3D G3DSA:3.30.470.20 204 438 4.4E-85 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SUPERFAMILY SSF56059 83 349 3.36E-59 T 11-11-2016 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1194 0.0 T 11-11-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Gene3D G3DSA:3.30.1360.40 794 874 8.3E-26 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 446 762 1.9E-85 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Pfam PF02682 Allophanate hydrolase subunit 1 794 1010 3.0E-49 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SUPERFAMILY SSF160467 794 885 3.27E-18 T 11-11-2016 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SUPERFAMILY SSF50891 909 1041 1.52E-26 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Pfam PF02626 Allophanate hydrolase subunit 2 469 740 1.3E-85 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 318 2.6E-58 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SUPERFAMILY SSF50891 621 747 6.83E-34 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SUPERFAMILY SSF52440 1 112 1.15E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Gene3D G3DSA:2.40.100.10 909 1048 1.1E-45 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Gene3D G3DSA:2.40.100.10 621 753 2.5E-34 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SUPERFAMILY SSF51230 1120 1194 4.97E-19 T 11-11-2016 IPR011053 Single hybrid motif WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SMART SM00797 468 757 3.6E-164 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Gene3D G3DSA:3.30.1490.20 129 201 7.0E-23 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SMART SM00878 333 437 3.6E-54 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Pfam PF00364 Biotin-requiring enzyme 1128 1191 6.6E-15 T 11-11-2016 IPR000089 Biotin/lipoyl attachment WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SUPERFAMILY SSF51246 327 439 2.51E-38 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 SMART SM00796 792 1025 2.9E-117 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Pfam PF02785 Biotin carboxylase C-terminal domain 333 437 1.2E-36 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 WS_RS05365 7edbe13894710cf3167959aacbb15a01 1200 Gene3D G3DSA:2.40.50.100 1123 1194 2.8E-21 T 11-11-2016 WS_RS03295 edd3d2eda75cc6045bc977f2563dad02 175 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 149 3.3E-50 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 WS_RS03295 edd3d2eda75cc6045bc977f2563dad02 175 PIRSF PIRSF004682 1 175 1.1E-58 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 WS_RS03295 edd3d2eda75cc6045bc977f2563dad02 175 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 145 6.2E-36 T 11-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 WS_RS03295 edd3d2eda75cc6045bc977f2563dad02 175 Gene3D G3DSA:3.40.50.1000 1 171 3.3E-49 T 11-11-2016 IPR023214 HAD-like domain WS_RS03295 edd3d2eda75cc6045bc977f2563dad02 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 141 6.1E-27 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 WS_RS03295 edd3d2eda75cc6045bc977f2563dad02 175 Pfam PF13242 HAD-hyrolase-like 101 153 1.5E-5 T 11-11-2016 WS_RS03295 edd3d2eda75cc6045bc977f2563dad02 175 SUPERFAMILY SSF56784 3 173 6.55E-40 T 11-11-2016 IPR023214 HAD-like domain WS_RS00575 a9784175869136bcc5e9d0fef4ff0618 146 Gene3D G3DSA:1.10.1130.10 49 137 1.9E-11 T 11-11-2016 IPR012286 Tetrahaem cytochrome domain WS_RS00575 a9784175869136bcc5e9d0fef4ff0618 146 SUPERFAMILY SSF48695 55 139 1.52E-13 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS00575 a9784175869136bcc5e9d0fef4ff0618 146 Pfam PF14537 Cytochrome c3 50 135 3.7E-16 T 11-11-2016 WS_RS02860 7e2ee752b7651bba575de985339c6606 236 SMART SM00363 1 63 1.1E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS02860 7e2ee752b7651bba575de985339c6606 236 Gene3D G3DSA:3.10.290.10 1 85 3.9E-20 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS02860 7e2ee752b7651bba575de985339c6606 236 Pfam PF01728 FtsJ-like methyltransferase 56 232 1.1E-16 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 WS_RS02860 7e2ee752b7651bba575de985339c6606 236 SUPERFAMILY SSF55174 1 65 2.06E-11 T 11-11-2016 WS_RS02860 7e2ee752b7651bba575de985339c6606 236 Pfam PF01479 S4 domain 1 45 1.1E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS02860 7e2ee752b7651bba575de985339c6606 236 Gene3D G3DSA:3.40.50.150 86 221 4.6E-12 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02860 7e2ee752b7651bba575de985339c6606 236 SUPERFAMILY SSF53335 52 233 2.37E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02860 7e2ee752b7651bba575de985339c6606 236 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 2 228 2.1E-63 T 11-11-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 SUPERFAMILY SSF54570 3 84 3.4E-34 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.367 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.9E-21 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.9E-21 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.9E-21 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 7.2E-45 T 11-11-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 Pfam PF00203 Ribosomal protein S19 3 83 2.6E-35 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 PIRSF PIRSF002144 1 93 1.1E-31 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 Gene3D G3DSA:3.30.860.10 1 89 1.4E-38 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08065 87127fd8c8a54c34e7d7cd6a16e5a2b5 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-11-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 Pfam PF00700 Bacterial flagellin C-terminal helical region 427 512 1.6E-24 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 Pfam PF07196 Flagellin hook IN motif 261 313 1.1E-8 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 Pfam PF07196 Flagellin hook IN motif 199 257 1.7E-10 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 SUPERFAMILY SSF64518 1 513 2.22E-94 T 11-11-2016 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 PRINTS PR00207 Flagellin signature 37 54 1.0E-19 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 PRINTS PR00207 Flagellin signature 76 95 1.0E-19 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 PRINTS PR00207 Flagellin signature 111 134 1.0E-19 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 Gene3D G3DSA:1.20.1330.10 415 469 3.5E-39 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 Gene3D G3DSA:1.20.1330.10 54 171 3.5E-39 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS10355 d86e4b83082b8144d033ba6151bcfc2a 513 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.5E-44 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS10065 f097a885d05deff799f1ede6f101da25 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 4.6E-38 T 11-11-2016 IPR023214 HAD-like domain WS_RS10065 f097a885d05deff799f1ede6f101da25 217 SUPERFAMILY SSF56784 5 196 7.73E-43 T 11-11-2016 IPR023214 HAD-like domain WS_RS10065 f097a885d05deff799f1ede6f101da25 217 Gene3D G3DSA:1.10.150.240 18 74 9.2E-7 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 WS_RS10065 f097a885d05deff799f1ede6f101da25 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 177 1.1E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 WS_RS10065 f097a885d05deff799f1ede6f101da25 217 Gene3D G3DSA:3.40.50.1000 75 198 1.1E-32 T 11-11-2016 IPR023214 HAD-like domain WS_RS04680 9595c6c6b2613155b99cd5a34c761957 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 20 235 1.4E-48 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase WS_RS04680 9595c6c6b2613155b99cd5a34c761957 244 SUPERFAMILY SSF64438 6 237 2.44E-67 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic WS_RS04680 9595c6c6b2613155b99cd5a34c761957 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 15 237 1.2E-63 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase WS_RS04680 9595c6c6b2613155b99cd5a34c761957 244 Gene3D G3DSA:3.60.140.10 7 239 1.4E-70 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 86 93 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 67 472 4.0E-110 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 16 485 7.4E-250 T 11-11-2016 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 Gene3D G3DSA:3.40.50.1980 219 325 3.3E-51 T 11-11-2016 WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 Gene3D G3DSA:3.40.50.1980 13 177 7.4E-67 T 11-11-2016 WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 Gene3D G3DSA:3.40.50.1980 351 485 4.7E-62 T 11-11-2016 WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 SUPERFAMILY SSF53807 17 485 3.03E-158 T 11-11-2016 WS_RS06640 0141e20bdf5de608dfc3293e8a1659d6 486 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 30 479 5.5E-187 T 11-11-2016 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 WS_RS07315 a233297bd1cf22f4113abe331e394e3e 313 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 10 301 6.4E-74 T 11-11-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 WS_RS07315 a233297bd1cf22f4113abe331e394e3e 313 SUPERFAMILY SSF52540 7 289 3.66E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07315 a233297bd1cf22f4113abe331e394e3e 313 Gene3D G3DSA:3.40.50.300 6 290 1.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07315 a233297bd1cf22f4113abe331e394e3e 313 Pfam PF02374 Anion-transporting ATPase 7 303 1.3E-74 T 11-11-2016 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 WS_RS05575 6bb0cd9604b5f04f08d780474a51013a 100 Pfam PF05488 PAAR motif 24 90 1.2E-22 T 11-11-2016 IPR008727 PAAR motif WS_RS03355 6ae17084efec6c7d38a9f19a71ca2061 341 SMART SM00636 24 333 2.7E-7 T 11-11-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 WS_RS03355 6ae17084efec6c7d38a9f19a71ca2061 341 Pfam PF00704 Glycosyl hydrolases family 18 74 332 2.1E-23 T 11-11-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 WS_RS03355 6ae17084efec6c7d38a9f19a71ca2061 341 SUPERFAMILY SSF51445 68 244 1.92E-43 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily WS_RS03355 6ae17084efec6c7d38a9f19a71ca2061 341 SUPERFAMILY SSF51445 305 339 1.92E-43 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily WS_RS03355 6ae17084efec6c7d38a9f19a71ca2061 341 Gene3D G3DSA:3.20.20.80 313 338 6.9E-36 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 WS_RS03355 6ae17084efec6c7d38a9f19a71ca2061 341 Gene3D G3DSA:3.20.20.80 69 250 6.9E-36 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Pfam PF02310 B12 binding domain 711 822 1.3E-16 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Gene3D G3DSA:1.10.1240.10 617 700 3.1E-24 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Gene3D G3DSA:3.10.196.10 919 1120 7.9E-41 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 SUPERFAMILY SSF51717 331 595 2.88E-72 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Gene3D G3DSA:3.20.20.330 1 338 2.4E-100 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 SUPERFAMILY SSF52242 705 833 9.55E-38 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 917 1120 2.7E-21 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 SUPERFAMILY SSF82282 3 373 2.22E-105 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Gene3D G3DSA:3.40.50.280 706 836 5.3E-42 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 PIRSF PIRSF000381 1 1120 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 SUPERFAMILY SSF47644 618 702 3.66E-19 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 SMART SM01018 622 704 8.7E-32 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Pfam PF02574 Homocysteine S-methyltransferase 15 299 2.3E-68 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 SUPERFAMILY SSF56507 870 1120 2.75E-69 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Gene3D G3DSA:3.20.20.20 339 595 2.0E-81 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Pfam PF02607 B12 binding domain 625 696 6.4E-21 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 Pfam PF00809 Pterin binding enzyme 334 567 2.4E-34 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS05905 ec616332613382650e902fdbd7d0906e 1120 TIGRFAM TIGR02082 metH: methionine synthase 11 1120 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS03020 9d6246a334bcdc044ea1570a093598ec 240 Gene3D G3DSA:3.20.20.70 2 233 1.4E-77 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS03020 9d6246a334bcdc044ea1570a093598ec 240 Pfam PF00977 Histidine biosynthesis protein 2 226 5.9E-75 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 WS_RS03020 9d6246a334bcdc044ea1570a093598ec 240 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 228 9.9E-79 T 11-11-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 WS_RS03020 9d6246a334bcdc044ea1570a093598ec 240 SUPERFAMILY SSF51366 2 232 3.16E-67 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 WS_RS03020 9d6246a334bcdc044ea1570a093598ec 240 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 234 35.067 T 11-11-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 WS_RS10080 69097915ab4a89feadb8c3e3701778e7 139 Gene3D G3DSA:3.90.1180.10 5 136 1.2E-57 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 WS_RS10080 69097915ab4a89feadb8c3e3701778e7 139 SUPERFAMILY SSF52161 4 136 7.72E-54 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 WS_RS10080 69097915ab4a89feadb8c3e3701778e7 139 Pfam PF00572 Ribosomal protein L13 15 137 4.3E-52 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 WS_RS10080 69097915ab4a89feadb8c3e3701778e7 139 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 138 27.429 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 WS_RS10080 69097915ab4a89feadb8c3e3701778e7 139 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 137 1.2E-57 T 11-11-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS10080 69097915ab4a89feadb8c3e3701778e7 139 PIRSF PIRSF002181 1 139 4.4E-49 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 SMART SM00342 184 266 1.2E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 SUPERFAMILY SSF46689 175 217 4.81E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 Gene3D G3DSA:1.10.10.60 222 266 2.4E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 Gene3D G3DSA:1.10.10.60 166 220 2.7E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 SUPERFAMILY SSF51215 14 141 3.92E-12 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 Pfam PF02311 AraC-like ligand binding domain 24 130 6.6E-11 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 SUPERFAMILY SSF46689 221 266 7.62E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 Pfam PF12833 Helix-turn-helix domain 190 266 5.3E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS04765 79b38dd59993659de842a56fd88a420d 267 Gene3D G3DSA:2.60.120.280 23 132 3.6E-4 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 SMART SM00938 4 105 7.8E-67 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.2E-44 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 SUPERFAMILY SSF54913 1 112 1.59E-46 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 PRINTS PR00340 P-II protein signature 83 103 4.2E-45 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 PRINTS PR00340 P-II protein signature 23 41 4.2E-45 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 PRINTS PR00340 P-II protein signature 2 17 4.2E-45 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 PRINTS PR00340 P-II protein signature 52 75 4.2E-45 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 Gene3D G3DSA:3.30.70.120 1 112 2.2E-51 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 WS_RS02745 f320b6d8c6931c2f9d7fe0387b46d2fa 112 PIRSF PIRSF039144 1 112 3.7E-55 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 Gene3D G3DSA:1.10.10.60 3 44 2.9E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 SUPERFAMILY SSF46689 44 92 1.66E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 SUPERFAMILY SSF46689 1 41 1.0E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 SMART SM00342 8 91 4.4E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 Gene3D G3DSA:1.10.10.60 45 92 1.5E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 60 75 2.6E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 91 2.6E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS05335 53c24290fee03dd1b5b804f12eb4ffbe 93 Pfam PF12833 Helix-turn-helix domain 15 92 2.0E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS02010 b8d5544586eafb639553123a01c28cc4 303 Pfam PF03547 Membrane transport protein 158 297 6.5E-11 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 15 362 4.2E-87 T 11-11-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 Pfam PF13286 Phosphohydrolase-associated domain 274 361 5.9E-26 T 11-11-2016 IPR026875 Phosphohydrolase-associated domain WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 Pfam PF01966 HD domain 52 185 9.2E-15 T 11-11-2016 IPR006674 HD domain WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 363 34.612 T 11-11-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 Gene3D G3DSA:1.10.3210.10 15 205 3.3E-75 T 11-11-2016 IPR006674 HD domain WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 Gene3D G3DSA:1.10.3210.10 241 363 3.3E-75 T 11-11-2016 IPR006674 HD domain WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 SUPERFAMILY SSF109604 7 363 2.48E-80 T 11-11-2016 WS_RS01470 5a830e473aa9ae5d2f75250b289cd538 365 SMART SM00471 48 196 3.1E-11 T 11-11-2016 IPR003607 HD/PDEase domain WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 321 336 - T 11-11-2016 IPR033136 NAD-dependent DNA ligase, conserved site WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 644 7.7E-222 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SUPERFAMILY SSF52113 573 649 1.96E-18 T 11-11-2016 IPR001357 BRCT domain WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SMART SM00278 433 452 2.5 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SMART SM00278 499 518 1900.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SMART SM00278 467 486 0.18 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SMART SM00278 529 548 1.3 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SUPERFAMILY SSF50249 309 389 1.16E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 388 2.1E-30 T 11-11-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Gene3D G3DSA:1.10.150.20 422 488 9.5E-28 T 11-11-2016 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SUPERFAMILY SSF56091 5 307 2.34E-107 T 11-11-2016 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Pfam PF12826 Helix-hairpin-helix motif 497 553 1.5E-7 T 11-11-2016 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Pfam PF14520 Helix-hairpin-helix domain 433 487 5.6E-8 T 11-11-2016 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 577 645 3.6E-9 T 11-11-2016 IPR001357 BRCT domain WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Gene3D G3DSA:1.10.287.610 5 65 7.4E-19 T 11-11-2016 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SUPERFAMILY SSF47781 394 553 2.05E-47 T 11-11-2016 IPR010994 RuvA domain 2-like WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Gene3D G3DSA:2.40.50.140 310 379 3.5E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 307 2.3E-110 T 11-11-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 397 421 2.7E-6 T 11-11-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Hamap MF_01588 DNA ligase [ligA]. 4 648 47.511 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SMART SM00292 575 650 1.3E-9 T 11-11-2016 IPR001357 BRCT domain WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Gene3D G3DSA:3.40.50.10190 574 649 5.6E-23 T 11-11-2016 IPR001357 BRCT domain WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 110 139 - T 11-11-2016 IPR018239 NAD-dependent DNA ligase, active site WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 PIRSF PIRSF001604 1 650 2.5E-218 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Gene3D G3DSA:1.10.150.20 493 558 8.8E-12 T 11-11-2016 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 SMART SM00532 1 435 8.7E-226 T 11-11-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 WS_RS08420 e578c53f700813218ba08b2ac2f37010 650 Gene3D G3DSA:3.30.470.30 115 241 3.9E-47 T 11-11-2016 WS_RS07900 c95f36539fb3ecb4f4970c23fbebac42 286 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 208 220 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 WS_RS07900 c95f36539fb3ecb4f4970c23fbebac42 286 Gene3D G3DSA:1.10.600.10 6 261 9.3E-73 T 11-11-2016 IPR008949 Isoprenoid synthase domain WS_RS07900 c95f36539fb3ecb4f4970c23fbebac42 286 SUPERFAMILY SSF48576 6 261 5.76E-69 T 11-11-2016 IPR008949 Isoprenoid synthase domain WS_RS07900 c95f36539fb3ecb4f4970c23fbebac42 286 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 78 94 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 WS_RS07900 c95f36539fb3ecb4f4970c23fbebac42 286 Pfam PF00348 Polyprenyl synthetase 27 248 5.3E-49 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 Pfam PF13840 ACT domain 332 394 7.9E-15 T 11-11-2016 IPR027795 GATS-like ACT domain WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 Pfam PF00696 Amino acid kinase family 1 224 8.8E-53 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 PIRSF PIRSF000726 55 401 3.9E-135 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 399 4.3E-148 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 SUPERFAMILY SSF55021 327 400 1.37E-22 T 11-11-2016 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 Gene3D G3DSA:3.30.70.260 268 324 2.8E-6 T 11-11-2016 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 Pfam PF01842 ACT domain 267 323 1.7E-12 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 Gene3D G3DSA:3.40.1160.10 1 246 9.8E-73 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 SUPERFAMILY SSF53633 3 242 2.88E-75 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 SUPERFAMILY SSF55021 246 322 5.02E-19 T 11-11-2016 WS_RS08150 365f6123b14c35ce102cbf772a2d9cdc 401 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 54 398 3.4E-125 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 19 423 7.5E-108 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 Gene3D G3DSA:3.65.10.10 237 425 4.0E-49 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 PIRSF PIRSF000505 3 433 1.6E-102 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 ProSitePatterns PS00885 EPSP synthase signature 2. 342 360 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 427 1.5E-122 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 Gene3D G3DSA:3.65.10.10 24 236 2.7E-49 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 429 30.991 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 WS_RS06265 b89219a85b1602731099bd75ee4656da 437 SUPERFAMILY SSF55205 20 426 2.78E-110 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 WS_RS08610 e550d621ec084a5e351456e6966c66e6 159 Gene3D G3DSA:3.30.300.20 23 152 4.2E-10 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS08610 e550d621ec084a5e351456e6966c66e6 159 SUPERFAMILY SSF82784 30 152 7.2E-7 T 11-11-2016 IPR003718 OsmC/Ohr family WS_RS08610 e550d621ec084a5e351456e6966c66e6 159 Pfam PF02566 OsmC-like protein 49 153 2.6E-12 T 11-11-2016 IPR003718 OsmC/Ohr family WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 SMART SM00100 8 126 3.5E-15 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 Pfam PF13545 Crp-like helix-turn-helix domain 147 207 3.9E-11 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 Pfam PF00027 Cyclic nucleotide-binding domain 27 109 1.3E-16 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 Gene3D G3DSA:1.10.10.10 143 210 1.9E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 SMART SM00419 154 203 1.0E-6 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 SUPERFAMILY SSF46785 144 210 1.32E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 Gene3D G3DSA:2.60.120.10 4 136 8.4E-29 T 11-11-2016 IPR014710 RmlC-like jelly roll fold WS_RS05710 d76146d6cc66bbe4981194827b07e925 213 SUPERFAMILY SSF51206 3 138 5.37E-31 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like WS_RS01180 e06310fadb9d34f5e2c7da2a18452c2e 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 8 234 8.0E-97 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 WS_RS01180 e06310fadb9d34f5e2c7da2a18452c2e 243 SUPERFAMILY SSF53633 6 233 1.22E-68 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS01180 e06310fadb9d34f5e2c7da2a18452c2e 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 240 42.488 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 WS_RS01180 e06310fadb9d34f5e2c7da2a18452c2e 243 PIRSF PIRSF005650 3 243 1.0E-90 T 11-11-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 WS_RS01180 e06310fadb9d34f5e2c7da2a18452c2e 243 Gene3D G3DSA:3.40.1160.10 5 233 6.2E-79 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS01180 e06310fadb9d34f5e2c7da2a18452c2e 243 Pfam PF00696 Amino acid kinase family 9 218 4.1E-33 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS04300 c0621f258fb724017f9df167426ac614 99 Hamap MF_01396 ATP synthase subunit c [atpH]. 27 95 16.271 T 11-11-2016 WS_RS04300 c0621f258fb724017f9df167426ac614 99 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 38 95 3.1E-14 T 11-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 WS_RS04300 c0621f258fb724017f9df167426ac614 99 PRINTS PR00124 ATP synthase C subunit signature 30 49 4.3E-15 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 WS_RS04300 c0621f258fb724017f9df167426ac614 99 PRINTS PR00124 ATP synthase C subunit signature 68 93 4.3E-15 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 WS_RS04300 c0621f258fb724017f9df167426ac614 99 PRINTS PR00124 ATP synthase C subunit signature 51 66 4.3E-15 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 WS_RS04300 c0621f258fb724017f9df167426ac614 99 SUPERFAMILY SSF81333 22 97 8.24E-19 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 WS_RS04300 c0621f258fb724017f9df167426ac614 99 ProSitePatterns PS00605 ATP synthase c subunit signature. 58 79 - T 11-11-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 WS_RS04300 c0621f258fb724017f9df167426ac614 99 Gene3D G3DSA:1.20.20.10 27 94 1.9E-22 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 WS_RS04300 c0621f258fb724017f9df167426ac614 99 Pfam PF00137 ATP synthase subunit C 29 92 2.8E-13 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 WS_RS02925 481717d2eeffcda6db1d7384a7983a72 547 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 60 466 7.7E-62 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS02925 481717d2eeffcda6db1d7384a7983a72 547 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 175 200 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 WS_RS02925 481717d2eeffcda6db1d7384a7983a72 547 Pfam PF00474 Sodium:solute symporter family 60 466 1.1E-118 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS04165 64de58f6ba885bf6de6d1cb111709c6e 343 Pfam PF02547 Queuosine biosynthesis protein 11 342 1.5E-102 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 WS_RS04165 64de58f6ba885bf6de6d1cb111709c6e 343 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 10 343 1.6E-108 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 WS_RS04165 64de58f6ba885bf6de6d1cb111709c6e 343 Gene3D G3DSA:2.40.10.240 70 137 9.3E-10 T 11-11-2016 WS_RS04165 64de58f6ba885bf6de6d1cb111709c6e 343 Gene3D G3DSA:3.40.1780.10 189 343 1.0E-73 T 11-11-2016 WS_RS04165 64de58f6ba885bf6de6d1cb111709c6e 343 Gene3D G3DSA:3.40.1780.10 10 68 1.0E-73 T 11-11-2016 WS_RS04165 64de58f6ba885bf6de6d1cb111709c6e 343 SUPERFAMILY SSF111337 11 343 9.94E-107 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 WS_RS04165 64de58f6ba885bf6de6d1cb111709c6e 343 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 343 38.115 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 5 325 9.4E-128 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 Gene3D G3DSA:3.40.50.720 3 159 1.5E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 PIRSF PIRSF000149 2 333 2.1E-129 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 5 151 9.1E-53 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 5.6E-62 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 SMART SM00846 4 151 3.4E-76 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.2E-34 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.2E-34 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.2E-34 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.2E-34 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.2E-34 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 Gene3D G3DSA:3.30.360.10 160 315 4.2E-70 T 11-11-2016 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 SUPERFAMILY SSF55347 151 314 1.28E-65 T 11-11-2016 WS_RS01720 48fdafa77917dfeb1f6e5423655a8a77 333 SUPERFAMILY SSF51735 5 167 1.29E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Pfam PF07517 SecA DEAD-like domain 7 385 2.6E-123 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Pfam PF02810 SEC-C motif 830 848 6.7E-10 T 11-11-2016 IPR004027 SEC-C motif WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SUPERFAMILY SSF52540 352 399 5.02E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SUPERFAMILY SSF52540 5 230 5.02E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 785 19.408 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SMART SM00958 230 342 3.7E-64 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Gene3D G3DSA:1.10.3060.10 603 783 4.9E-42 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Gene3D G3DSA:3.40.50.300 3 230 2.0E-115 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Gene3D G3DSA:3.40.50.300 353 400 2.0E-115 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SUPERFAMILY SSF52540 401 573 4.84E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SMART SM00957 6 386 3.4E-265 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Pfam PF00271 Helicase conserved C-terminal domain 418 533 9.4E-6 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 501 1.7E-227 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 PRINTS PR00906 SecA protein signature 172 192 9.0E-65 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 PRINTS PR00906 SecA protein signature 64 88 9.0E-65 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 PRINTS PR00906 SecA protein signature 102 116 9.0E-65 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 PRINTS PR00906 SecA protein signature 397 410 9.0E-65 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 PRINTS PR00906 SecA protein signature 118 128 9.0E-65 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 PRINTS PR00906 SecA protein signature 323 345 9.0E-65 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 PRINTS PR00906 SecA protein signature 360 377 9.0E-65 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SUPERFAMILY SSF81767 229 352 1.83E-44 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Pfam PF07516 SecA Wing and Scaffold domain 573 782 5.8E-55 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Gene3D G3DSA:3.40.50.300 402 574 1.5E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Gene3D G3DSA:3.90.1440.10 233 352 8.1E-45 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SUPERFAMILY SSF81886 826 838 1.57E-67 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 SUPERFAMILY SSF81886 575 793 1.57E-67 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 WS_RS06015 33cc05e4e3f55495c827a7e4dd1c2e07 859 Pfam PF01043 SecA preprotein cross-linking domain 236 342 6.4E-37 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 SUPERFAMILY SSF47364 2 82 4.32E-14 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 SMART SM00963 1 79 6.7E-13 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 Gene3D G3DSA:1.20.120.140 2 64 1.7E-11 T 11-11-2016 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 Pfam PF00448 SRP54-type protein, GTPase domain 94 288 9.5E-73 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 Gene3D G3DSA:1.10.260.30 320 425 3.0E-35 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 Pfam PF02978 Signal peptide binding domain 320 420 8.7E-30 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 SMART SM00382 93 294 7.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 434 31.095 T 11-11-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 SMART SM00962 94 289 6.6E-104 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 SUPERFAMILY SSF47446 291 424 5.1E-43 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 Pfam PF02881 SRP54-type protein, helical bundle domain 5 70 6.7E-10 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 Gene3D G3DSA:3.40.50.300 89 289 5.5E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 262 275 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 SUPERFAMILY SSF52540 88 290 5.49E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02680 25c62662a0c07796be71a9fe779431d8 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 423 1.1E-155 T 11-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 WS_RS06660 4f97517cddcf22731f55626a655401fe 376 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 9 25 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS06660 4f97517cddcf22731f55626a655401fe 376 SUPERFAMILY SSF51569 2 276 2.01E-74 T 11-11-2016 WS_RS06660 4f97517cddcf22731f55626a655401fe 376 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 2 365 6.8E-157 T 11-11-2016 IPR013477 Homocitrate synthase NifV-type GO:0004410|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 WS_RS06660 4f97517cddcf22731f55626a655401fe 376 Gene3D G3DSA:3.20.20.70 2 329 8.1E-95 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06660 4f97517cddcf22731f55626a655401fe 376 Pfam PF00682 HMGL-like 2 240 4.6E-69 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 WS_RS06660 4f97517cddcf22731f55626a655401fe 376 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 188 201 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 WS_RS05055 8a1535e8162d610f0a8a13e79bdb3a51 351 SUPERFAMILY SSF64182 7 348 8.24E-23 T 11-11-2016 WS_RS05055 8a1535e8162d610f0a8a13e79bdb3a51 351 Pfam PF02272 DHHA1 domain 290 328 1.1E-4 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 WS_RS00390 d6b50733a189e65832549c0763393fbb 167 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 5 167 21.705 T 11-11-2016 IPR007551 Protein of unknown function DUF520 WS_RS00390 d6b50733a189e65832549c0763393fbb 167 SUPERFAMILY SSF89963 8 93 1.7E-23 T 11-11-2016 IPR007551 Protein of unknown function DUF520 WS_RS00390 d6b50733a189e65832549c0763393fbb 167 SUPERFAMILY SSF89963 96 167 2.88E-24 T 11-11-2016 IPR007551 Protein of unknown function DUF520 WS_RS00390 d6b50733a189e65832549c0763393fbb 167 Gene3D G3DSA:3.30.70.990 13 102 5.0E-28 T 11-11-2016 WS_RS00390 d6b50733a189e65832549c0763393fbb 167 Pfam PF04461 Protein of unknown function (DUF520) 7 167 8.9E-56 T 11-11-2016 IPR007551 Protein of unknown function DUF520 WS_RS00390 d6b50733a189e65832549c0763393fbb 167 Gene3D G3DSA:3.30.70.860 103 167 6.0E-27 T 11-11-2016 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 3.4E-69 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 SUPERFAMILY SSF50249 2 123 2.57E-51 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 Gene3D G3DSA:2.40.50.140 2 123 2.4E-64 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 Pfam PF00164 Ribosomal protein S12/S23 3 122 1.1E-41 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-58 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-58 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-58 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-58 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-58 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-58 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 PIRSF PIRSF002133 1 124 1.2E-53 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02320 0ef88dfd3fe65c547c75cd47ea9a0d75 134 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.804 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS01620 2ef609bc6e01f396708f045651058be5 190 Gene3D G3DSA:3.90.950.10 6 184 8.3E-32 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like WS_RS01620 2ef609bc6e01f396708f045651058be5 190 Pfam PF02545 Maf-like protein 7 184 2.0E-22 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 WS_RS01620 2ef609bc6e01f396708f045651058be5 190 PIRSF PIRSF006305 3 190 4.0E-39 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 WS_RS01620 2ef609bc6e01f396708f045651058be5 190 SUPERFAMILY SSF52972 4 184 5.89E-35 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like WS_RS01620 2ef609bc6e01f396708f045651058be5 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 2.7E-36 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 SUPERFAMILY SSF55021 633 693 8.55E-5 T 11-11-2016 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 Gene3D G3DSA:3.30.460.10 193 341 1.1E-37 T 11-11-2016 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 SUPERFAMILY SSF109604 29 205 1.19E-60 T 11-11-2016 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 SMART SM00954 253 362 1.8E-59 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 SUPERFAMILY SSF81301 207 365 7.19E-51 T 11-11-2016 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 Gene3D G3DSA:3.10.20.30 396 457 7.4E-13 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 SUPERFAMILY SSF81271 383 456 3.49E-18 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 Pfam PF04607 Region found in RelA / SpoT proteins 253 361 6.6E-33 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 Pfam PF02824 TGS domain 396 455 4.8E-17 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 33 698 1.6E-200 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 Pfam PF13328 HD domain 33 190 2.0E-42 T 11-11-2016 IPR003607 HD/PDEase domain WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 Gene3D G3DSA:3.30.70.260 634 697 1.4E-5 T 11-11-2016 WS_RS01190 83d6149a92a71bbdda39dab5b4436af7 715 SMART SM00471 48 168 3.8E-9 T 11-11-2016 IPR003607 HD/PDEase domain WS_RS03195 28af78a2928611a158cfccde51e1be6a 221 SUPERFAMILY SSF53448 1 201 6.28E-23 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS03195 28af78a2928611a158cfccde51e1be6a 221 Pfam PF00535 Glycosyl transferase family 2 3 102 2.3E-8 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 WS_RS03195 28af78a2928611a158cfccde51e1be6a 221 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 2 221 5.0E-67 T 11-11-2016 IPR026461 Transferase 2, rSAM/selenodomain-associated WS_RS03195 28af78a2928611a158cfccde51e1be6a 221 Gene3D G3DSA:3.90.550.10 2 184 1.3E-11 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 SUPERFAMILY SSF54292 2 106 5.24E-28 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 Gene3D G3DSA:1.10.1060.10 112 237 1.6E-30 T 11-11-2016 WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 111 2.6E-33 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 231 8.2E-55 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 151 162 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 Pfam PF13183 4Fe-4S dicluster domain 147 221 1.5E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 SUPERFAMILY SSF46548 109 236 1.08E-26 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 WS_RS03985 0567615c44b664d5ce0a748ec19f6235 239 Gene3D G3DSA:3.10.20.30 3 106 3.5E-34 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS02775 9a8c9f5c54f4a6ad8182145ad0817ca8 422 Pfam PF13742 OB-fold nucleic acid binding domain 5 96 6.0E-28 T 11-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 WS_RS02775 9a8c9f5c54f4a6ad8182145ad0817ca8 422 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 410 1.3E-129 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 WS_RS02775 9a8c9f5c54f4a6ad8182145ad0817ca8 422 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 412 26.826 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 WS_RS02775 9a8c9f5c54f4a6ad8182145ad0817ca8 422 Pfam PF02601 Exonuclease VII, large subunit 121 400 1.2E-76 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 WS_RS00570 ed89a3ad1c8a1e467416a5ade8406b55 213 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 7 176 1.0E-39 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal WS_RS00570 ed89a3ad1c8a1e467416a5ade8406b55 213 SUPERFAMILY SSF48695 13 174 3.26E-19 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS00570 ed89a3ad1c8a1e467416a5ade8406b55 213 Gene3D G3DSA:1.10.3820.10 6 175 4.8E-20 T 11-11-2016 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 Gene3D G3DSA:1.25.40.10 179 372 4.2E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 Gene3D G3DSA:1.25.40.10 555 764 2.0E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 Gene3D G3DSA:1.25.40.10 475 542 4.2E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 Gene3D G3DSA:1.25.40.10 410 432 4.2E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 SMART SM00028 735 768 55.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 SMART SM00028 253 286 71.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 SMART SM00028 327 360 14.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 SMART SM00028 176 209 170.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 SUPERFAMILY SSF48452 156 361 4.46E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 SUPERFAMILY SSF48452 582 764 2.6E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02415 99976be5c1054e8fa754226241cb2328 782 Pfam PF09976 Tetratricopeptide repeat-like domain 273 353 1.9E-7 T 11-11-2016 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 Pfam PF00120 Glutamine synthetase, catalytic domain 106 469 8.9E-127 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 262 277 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 SUPERFAMILY SSF55931 106 474 1.28E-125 T 11-11-2016 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 Gene3D G3DSA:3.30.590.10 109 454 6.5E-125 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 Gene3D G3DSA:3.10.20.70 7 108 7.6E-33 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 473 4.5E-196 T 11-11-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 SUPERFAMILY SSF54368 7 104 1.31E-31 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 SMART SM01230 105 382 5.1E-139 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 WS_RS10025 73f047fda557fd1aa2335c9ac7a7d748 475 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 97 5.6E-27 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 WS_RS05125 10af5f611e3c0298a0634833715cec1f 107 SUPERFAMILY SSF54862 9 87 7.12E-18 T 11-11-2016 WS_RS05125 10af5f611e3c0298a0634833715cec1f 107 Pfam PF12838 4Fe-4S dicluster domain 18 67 1.4E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05125 10af5f611e3c0298a0634833715cec1f 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05125 10af5f611e3c0298a0634833715cec1f 107 Gene3D G3DSA:3.30.70.20 12 80 3.7E-16 T 11-11-2016 WS_RS05125 10af5f611e3c0298a0634833715cec1f 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 19 30 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS08795 2147cf042814facba93a5f8a911639fc 137 SUPERFAMILY SSF54995 1 98 7.06E-34 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08795 2147cf042814facba93a5f8a911639fc 137 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 2.6E-32 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08795 2147cf042814facba93a5f8a911639fc 137 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 22.04 T 11-11-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 WS_RS08795 2147cf042814facba93a5f8a911639fc 137 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 11-11-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 WS_RS08795 2147cf042814facba93a5f8a911639fc 137 Pfam PF01250 Ribosomal protein S6 3 92 1.1E-28 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08795 2147cf042814facba93a5f8a911639fc 137 Gene3D G3DSA:3.30.70.60 1 102 4.7E-35 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 WS_RS09295 613032695878f911e3352e8cec6dbad4 580 Pfam PF13444 Acetyltransferase (GNAT) domain 326 426 4.6E-24 T 11-11-2016 WS_RS09295 613032695878f911e3352e8cec6dbad4 580 SUPERFAMILY SSF55729 316 466 1.17E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS09295 613032695878f911e3352e8cec6dbad4 580 SUPERFAMILY SSF69593 60 211 1.11E-16 T 11-11-2016 WS_RS09295 613032695878f911e3352e8cec6dbad4 580 Gene3D G3DSA:3.40.1130.10 68 199 1.2E-7 T 11-11-2016 WS_RS09295 613032695878f911e3352e8cec6dbad4 580 SMART SM00563 83 200 3.4E-10 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 WS_RS09295 613032695878f911e3352e8cec6dbad4 580 Pfam PF01553 Acyltransferase 69 197 1.1E-11 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 WS_RS08305 2007c191051db83553cfee4febe43bcb 475 Pfam PF02562 PhoH-like protein 246 473 2.3E-58 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 WS_RS08305 2007c191051db83553cfee4febe43bcb 475 Pfam PF13638 PIN domain 11 158 1.6E-11 T 11-11-2016 IPR002716 PIN domain WS_RS08305 2007c191051db83553cfee4febe43bcb 475 Gene3D G3DSA:3.40.50.300 244 473 9.7E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08305 2007c191051db83553cfee4febe43bcb 475 Gene3D G3DSA:3.40.50.1010 117 163 1.5E-15 T 11-11-2016 IPR029060 PIN domain-like WS_RS08305 2007c191051db83553cfee4febe43bcb 475 Gene3D G3DSA:3.40.50.1010 9 72 1.5E-15 T 11-11-2016 IPR029060 PIN domain-like WS_RS08305 2007c191051db83553cfee4febe43bcb 475 SUPERFAMILY SSF88723 10 73 3.64E-16 T 11-11-2016 IPR029060 PIN domain-like WS_RS08305 2007c191051db83553cfee4febe43bcb 475 SUPERFAMILY SSF88723 117 162 3.64E-16 T 11-11-2016 IPR029060 PIN domain-like WS_RS08305 2007c191051db83553cfee4febe43bcb 475 SUPERFAMILY SSF52540 186 333 2.16E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08305 2007c191051db83553cfee4febe43bcb 475 SUPERFAMILY SSF52540 380 452 2.16E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08305 2007c191051db83553cfee4febe43bcb 475 SMART SM00670 9 147 1.4E-4 T 11-11-2016 IPR002716 PIN domain WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 Gene3D G3DSA:3.30.450.20 137 272 3.0E-25 T 11-11-2016 WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 Gene3D G3DSA:1.10.287.950 385 586 1.5E-43 T 11-11-2016 WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 Pfam PF00672 HAMP domain 280 347 3.0E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 SUPERFAMILY SSF103190 52 181 1.8E-20 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 SMART SM00283 366 627 6.4E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 Pfam PF02743 Cache domain 45 259 1.4E-31 T 11-11-2016 IPR033479 Double Cache domain 1 WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 SMART SM00304 297 351 1.2E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 SUPERFAMILY SSF58104 319 628 3.4E-58 T 11-11-2016 WS_RS06705 01326866c54a9bb9009b359545e32f7a 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 444 626 5.1E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 SUPERFAMILY SSF51690 104 274 4.32E-53 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 Gene3D G3DSA:3.90.1170.20 2 125 7.5E-34 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 SUPERFAMILY SSF54675 4 103 5.49E-23 T 11-11-2016 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 104 273 1.8E-56 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 9 274 2.3E-83 T 11-11-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 102 5.1E-19 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 Gene3D G3DSA:3.20.20.70 126 264 3.8E-50 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06095 64f30b7c1698211a35bb81f2a22ef604 275 PIRSF PIRSF006250 1 275 2.2E-79 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 SUPERFAMILY SSF53850 90 298 3.53E-30 T 11-11-2016 WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.8E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 SUPERFAMILY SSF46785 2 82 7.62E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 Gene3D G3DSA:3.40.190.10 173 273 9.4E-19 T 11-11-2016 WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 Gene3D G3DSA:1.10.10.10 2 82 7.8E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 Pfam PF03466 LysR substrate binding domain 89 297 5.9E-32 T 11-11-2016 IPR005119 LysR, substrate-binding WS_RS09020 4a33796c495e205cb355b8f2160fc880 299 Gene3D G3DSA:3.40.190.10 89 172 6.0E-12 T 11-11-2016 WS_RS08225 1c6014d57b0fbeaca6b484849a4a7f84 311 SUPERFAMILY SSF56524 63 307 1.1E-85 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 WS_RS08225 1c6014d57b0fbeaca6b484849a4a7f84 311 Gene3D G3DSA:3.90.420.10 69 310 1.1E-67 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 WS_RS08225 1c6014d57b0fbeaca6b484849a4a7f84 311 Pfam PF00174 Oxidoreductase molybdopterin binding domain 93 249 1.7E-31 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 WS_RS08225 1c6014d57b0fbeaca6b484849a4a7f84 311 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 1 311 58.455 T 11-11-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 WS_RS01785 72bdad0b4abe677ef3659631fa25464f 166 Gene3D G3DSA:1.10.10.60 127 156 9.9E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01785 72bdad0b4abe677ef3659631fa25464f 166 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 128 162 7.0E-4 T 11-11-2016 WS_RS05655 3c4390014cd85154f4cb22fb20d59a61 101 SUPERFAMILY SSF46626 27 100 2.91E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS05655 3c4390014cd85154f4cb22fb20d59a61 101 Gene3D G3DSA:1.10.760.10 19 100 1.6E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS06580 e5fcf71299728b11be1feaead1db587a 442 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 23 414 1.4E-114 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 WS_RS06580 e5fcf71299728b11be1feaead1db587a 442 Pfam PF02386 Cation transport protein 30 425 5.6E-65 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 SUPERFAMILY SSF47384 322 395 6.28E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 SMART SM00387 435 548 2.1E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 SUPERFAMILY SSF55874 395 547 3.27E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 546 2.1E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 Gene3D G3DSA:3.30.450.20 85 168 1.5E-9 T 11-11-2016 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 Gene3D G3DSA:3.30.565.10 381 547 3.3E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 1.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 1.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 546 1.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 1.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 Gene3D G3DSA:1.10.287.130 326 380 2.9E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10040 7c5aff442eb76dcd5f669d229d688d0a 548 SMART SM00388 326 396 1.4E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 Pfam PF01678 Diaminopimelate epimerase 157 237 2.5E-5 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 Pfam PF01678 Diaminopimelate epimerase 4 116 9.9E-23 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 SUPERFAMILY SSF54506 5 120 3.14E-29 T 11-11-2016 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 11-11-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 244 4.4E-52 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 Gene3D G3DSA:3.10.310.10 4 114 1.1E-29 T 11-11-2016 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 SUPERFAMILY SSF54506 126 243 3.81E-17 T 11-11-2016 WS_RS10135 7e7e95c553a711b921d74c55cc2bc27e 255 Gene3D G3DSA:3.10.310.10 115 214 6.9E-16 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Gene3D G3DSA:2.70.150.10 154 304 1.3E-19 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Gene3D G3DSA:3.40.50.1000 378 420 4.2E-43 T 11-11-2016 IPR023214 HAD-like domain WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Gene3D G3DSA:3.40.50.1000 522 666 4.2E-43 T 11-11-2016 IPR023214 HAD-like domain WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 11-11-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 407 413 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 154 700 4.2E-170 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 SUPERFAMILY SSF56784 403 423 8.84E-54 T 11-11-2016 IPR023214 HAD-like domain WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 SUPERFAMILY SSF56784 460 698 8.84E-54 T 11-11-2016 IPR023214 HAD-like domain WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00941 Cadmium-transporting ATPase signature 9 18 4.7E-16 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00941 Cadmium-transporting ATPase signature 20 41 4.7E-16 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00941 Cadmium-transporting ATPase signature 288 302 4.7E-16 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00941 Cadmium-transporting ATPase signature 269 285 4.7E-16 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00941 Cadmium-transporting ATPase signature 188 208 4.7E-16 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 154 702 5.4E-157 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 SUPERFAMILY SSF55008 8 76 2.36E-10 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Pfam PF00122 E1-E2 ATPase 175 396 1.2E-55 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Gene3D G3DSA:3.40.1110.10 421 521 4.7E-12 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 175 677 7.3E-66 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 SUPERFAMILY SSF81665 304 399 1.02E-9 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 SUPERFAMILY SSF81665 149 207 1.02E-9 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 617 1.5E-20 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 634 1.5E-20 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 405 419 1.5E-20 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 253 267 1.5E-20 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 552 1.5E-20 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 401 609 1.5E-32 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Pfam PF00403 Heavy-metal-associated domain 11 69 4.3E-10 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 SUPERFAMILY SSF81653 206 303 2.75E-19 T 11-11-2016 WS_RS05385 216992f14387e6fb99fbca43281a56c1 707 Gene3D G3DSA:3.30.70.100 8 77 1.1E-11 T 11-11-2016 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 Pfam PF01018 GTP1/OBG 2 157 4.7E-56 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 318 1.3E-125 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 Pfam PF01926 50S ribosome-binding GTPase 160 266 3.0E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 1.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 1.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 1.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 1.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 SUPERFAMILY SSF82051 1 157 6.54E-52 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 Gene3D G3DSA:3.40.50.300 159 286 1.9E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 Gene3D G3DSA:3.40.50.300 329 353 1.9E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 Hamap MF_01454 GTPase Obg [obg]. 1 355 45.695 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 SUPERFAMILY SSF52540 150 352 4.07E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 Gene3D G3DSA:2.70.210.12 1 155 1.9E-55 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 WS_RS02485 57d0b239b75e23bfc580baf67165a781 358 PIRSF PIRSF002401 1 328 5.6E-124 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 Gene3D G3DSA:3.30.470.20 197 385 1.5E-60 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 SUPERFAMILY SSF51246 318 385 1.44E-11 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 Gene3D G3DSA:3.40.50.20 8 119 4.5E-34 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 385 6.7E-157 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 7 387 47.569 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 SUPERFAMILY SSF56059 113 310 2.02E-57 T 11-11-2016 WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 SUPERFAMILY SSF52440 4 111 6.76E-31 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 Gene3D G3DSA:3.30.1490.20 122 196 6.9E-26 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS07755 8433a4036b4af6eb605069dd7b450ffe 387 Pfam PF02222 ATP-grasp domain 122 292 1.2E-53 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 Pfam PF01411 tRNA synthetases class II (A) 2 547 3.1E-202 T 11-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 SUPERFAMILY SSF50447 446 541 1.98E-11 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 SUPERFAMILY SSF55186 548 709 5.89E-47 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 SMART SM00863 644 687 2.5E-19 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 644 687 2.0E-17 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 1.5E-30 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 1.5E-30 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 1.5E-30 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 1.5E-30 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 1.5E-30 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 Gene3D G3DSA:3.30.930.10 2 235 3.3E-106 T 11-11-2016 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 833 9.5E-287 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 SUPERFAMILY SSF55681 2 239 2.14E-98 T 11-11-2016 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 Pfam PF02272 DHHA1 domain 780 847 1.5E-13 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 854 166.599 T 11-11-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 WS_RS01615 ef072a3eeca47a0e80b0265e43c627d0 855 SUPERFAMILY SSF101353 240 451 2.22E-57 T 11-11-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 WS_RS07735 9277c3fb1ee9ed8b6b1081ceb6e7ea54 467 SMART SM00382 264 410 2.3E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS07735 9277c3fb1ee9ed8b6b1081ceb6e7ea54 467 SUPERFAMILY SSF52540 262 460 1.68E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07735 9277c3fb1ee9ed8b6b1081ceb6e7ea54 467 Pfam PF00448 SRP54-type protein, GTPase domain 266 459 2.0E-44 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS07735 9277c3fb1ee9ed8b6b1081ceb6e7ea54 467 Gene3D G3DSA:3.40.50.300 83 122 3.8E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07735 9277c3fb1ee9ed8b6b1081ceb6e7ea54 467 Gene3D G3DSA:3.40.50.300 259 460 5.4E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07735 9277c3fb1ee9ed8b6b1081ceb6e7ea54 467 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 354 6.4E-71 T 11-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 WS_RS07735 9277c3fb1ee9ed8b6b1081ceb6e7ea54 467 SMART SM00962 265 460 1.8E-61 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS10000 1f3d7a624d40cea2e6c9b78092dabe18 291 PIRSF PIRSF006593 1 290 1.7E-98 T 11-11-2016 IPR014444 Uncharacterised conserved protein UCP006593 WS_RS10000 1f3d7a624d40cea2e6c9b78092dabe18 291 Pfam PF01937 Protein of unknown function DUF89 5 275 9.6E-51 T 11-11-2016 IPR002791 Domain of unknown function DUF89 WS_RS10000 1f3d7a624d40cea2e6c9b78092dabe18 291 SUPERFAMILY SSF111321 2 287 2.75E-79 T 11-11-2016 IPR002791 Domain of unknown function DUF89 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 26 34 - T 11-11-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 Pfam PF00710 Asparaginase, N-terminal 23 215 4.6E-59 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 Gene3D G3DSA:3.40.50.40 235 346 4.3E-38 T 11-11-2016 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 9 348 5.6E-136 T 11-11-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 PIRSF PIRSF001220 18 348 4.4E-91 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 SMART SM00870 23 342 1.3E-139 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 PIRSF PIRSF500176 20 348 3.0E-79 T 11-11-2016 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 Gene3D G3DSA:3.40.50.1170 20 231 1.1E-68 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 3.7E-22 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 PRINTS PR00139 Asparaginase/glutaminase family signature 24 35 3.7E-22 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 3.7E-22 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 11-11-2016 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 WS_RS03225 c0f5b63aa9159a353d4e8249829a3e9e 348 SUPERFAMILY SSF53774 22 347 3.14E-102 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS08975 c9bc6da741062f030b0ce2318ae4d6bd 489 SUPERFAMILY SSF53067 5 128 2.21E-30 T 11-11-2016 WS_RS08975 c9bc6da741062f030b0ce2318ae4d6bd 489 PIRSF PIRSF001267 1 474 9.0E-98 T 11-11-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 WS_RS08975 c9bc6da741062f030b0ce2318ae4d6bd 489 Gene3D G3DSA:3.30.420.150 130 299 2.8E-37 T 11-11-2016 WS_RS08975 c9bc6da741062f030b0ce2318ae4d6bd 489 Gene3D G3DSA:3.30.420.40 3 124 1.4E-32 T 11-11-2016 WS_RS08975 c9bc6da741062f030b0ce2318ae4d6bd 489 SUPERFAMILY SSF53067 129 297 1.89E-38 T 11-11-2016 WS_RS08975 c9bc6da741062f030b0ce2318ae4d6bd 489 Pfam PF02541 Ppx/GppA phosphatase family 20 299 3.4E-64 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 WS_RS08975 c9bc6da741062f030b0ce2318ae4d6bd 489 SUPERFAMILY SSF109604 310 467 3.77E-31 T 11-11-2016 WS_RS01070 a96ff346b58f8cdfbc700f8d7b9c98da 128 SUPERFAMILY SSF53146 1 116 7.19E-12 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS01070 a96ff346b58f8cdfbc700f8d7b9c98da 128 Gene3D G3DSA:3.30.420.130 1 114 3.0E-12 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS06435 ffb4505990549626f0a050273f1ddf60 143 Gene3D G3DSA:3.40.1400.10 4 141 3.1E-63 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 WS_RS06435 ffb4505990549626f0a050273f1ddf60 143 PIRSF PIRSF005384 2 143 5.2E-56 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 WS_RS06435 ffb4505990549626f0a050273f1ddf60 143 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 142 1.4E-61 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 WS_RS06435 ffb4505990549626f0a050273f1ddf60 143 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 141 8.1E-64 T 11-11-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 WS_RS06435 ffb4505990549626f0a050273f1ddf60 143 Pfam PF02502 Ribose/Galactose Isomerase 4 140 5.6E-56 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 WS_RS06435 ffb4505990549626f0a050273f1ddf60 143 SUPERFAMILY SSF89623 4 141 7.98E-57 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 3 260 43.358 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 Gene3D G3DSA:2.160.10.10 5 190 3.1E-48 T 11-11-2016 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 PIRSF PIRSF000456 3 266 2.0E-103 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 178 258 3.7E-18 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 Gene3D G3DSA:1.20.1180.10 196 265 5.2E-24 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 141 2.2E-9 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 50 3.2E-9 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 6 258 2.8E-103 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 SUPERFAMILY SSF51161 6 258 1.92E-71 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 151 179 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 WS_RS00280 ffa4677368411f1dbc69e82d92748b7a 266 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 18 46 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 SMART SM01049 46 137 2.4E-11 T 11-11-2016 IPR033480 Single Cache domain 2 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 508 4.6E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 Gene3D G3DSA:3.30.450.20 41 188 7.4E-32 T 11-11-2016 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 SUPERFAMILY SSF58104 385 576 9.29E-53 T 11-11-2016 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 SUPERFAMILY SSF58104 257 289 9.29E-53 T 11-11-2016 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 Pfam PF17200 Single Cache domain 2 52 194 7.9E-23 T 11-11-2016 IPR033480 Single Cache domain 2 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 Gene3D G3DSA:1.10.287.950 380 563 1.4E-44 T 11-11-2016 WS_RS05815 cda304c71b4a547fb5d3689c5e5f0d79 578 SMART SM00283 365 574 9.8E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 Gene3D G3DSA:3.40.50.1980 215 313 2.2E-31 T 11-11-2016 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 Gene3D G3DSA:3.40.50.1980 340 463 4.6E-51 T 11-11-2016 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 Gene3D G3DSA:3.40.50.1980 69 208 3.0E-52 T 11-11-2016 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 Pfam PF11844 Domain of unknown function (DUF3364) 2 55 4.2E-23 T 11-11-2016 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 69 487 3.3E-127 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 SUPERFAMILY SSF53807 2 508 9.81E-162 T 11-11-2016 WS_RS06635 9f2b55d9c528a376e080848c7a7466d5 509 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 509 5.1E-238 T 11-11-2016 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 453 6.4E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 SMART SM00387 355 455 2.2E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 SUPERFAMILY SSF47384 235 312 3.53E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 309 1.7E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 Gene3D G3DSA:1.10.287.130 238 304 1.6E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 Gene3D G3DSA:3.30.565.10 317 455 3.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 455 6.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 6.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 6.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 SUPERFAMILY SSF55874 317 454 8.12E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04565 dfab3175e6e7d1f3cf8d2d29bd6a9729 455 SMART SM00388 246 313 9.1E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01970 0bc1d860ab37c77c1b08bcb05bb046d0 455 SUPERFAMILY SSF55073 296 453 7.22E-44 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS01970 0bc1d860ab37c77c1b08bcb05bb046d0 455 Gene3D G3DSA:3.30.70.270 293 454 2.8E-49 T 11-11-2016 WS_RS01970 0bc1d860ab37c77c1b08bcb05bb046d0 455 Pfam PF03924 CHASE domain 101 193 1.4E-16 T 11-11-2016 IPR006189 CHASE domain WS_RS01970 0bc1d860ab37c77c1b08bcb05bb046d0 455 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 287 450 1.5E-38 T 11-11-2016 IPR000160 GGDEF domain WS_RS01970 0bc1d860ab37c77c1b08bcb05bb046d0 455 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 447 4.3E-43 T 11-11-2016 IPR000160 GGDEF domain WS_RS01970 0bc1d860ab37c77c1b08bcb05bb046d0 455 SMART SM01079 42 220 5.0E-38 T 11-11-2016 IPR006189 CHASE domain WS_RS01970 0bc1d860ab37c77c1b08bcb05bb046d0 455 SMART SM00267 280 452 1.6E-56 T 11-11-2016 IPR000160 GGDEF domain WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 SUPERFAMILY SSF48150 8 211 2.51E-65 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 SMART SM00525 189 209 6.1E-4 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 172 3.1E-25 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 Hamap MF_00942 Endonuclease III [nth]. 1 212 34.726 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 SMART SM00478 42 188 2.0E-50 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.9E-5 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 TIGRFAM TIGR01083 nth: endonuclease III 9 197 1.8E-69 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 Gene3D G3DSA:1.10.340.30 26 124 2.3E-34 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 PIRSF PIRSF001435 3 214 7.9E-49 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 WS_RS05090 32a79d9fe62e633344d302d7323bc7c7 215 Gene3D G3DSA:1.10.1670.10 125 210 4.6E-31 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 WS_RS05835 e8c025da5351f1cdcdbfbdc8d4db8f15 363 Pfam PF00589 Phage integrase family 168 342 1.1E-36 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 WS_RS05835 e8c025da5351f1cdcdbfbdc8d4db8f15 363 Gene3D G3DSA:1.10.443.10 168 350 3.2E-45 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 WS_RS05835 e8c025da5351f1cdcdbfbdc8d4db8f15 363 Hamap MF_02054 Tyrosine recombinase XerH [xerH]. 1 353 50.094 T 11-11-2016 IPR033683 Tyrosine recombinase XerH WS_RS05835 e8c025da5351f1cdcdbfbdc8d4db8f15 363 SUPERFAMILY SSF56349 163 354 5.3E-46 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 WS_RS10020 7fdda92d5e9d247cd238ad4a4c7db589 246 Gene3D G3DSA:1.10.287.500 81 203 9.5E-6 T 11-11-2016 WS_RS10020 7fdda92d5e9d247cd238ad4a4c7db589 246 SUPERFAMILY SSF75708 66 243 4.97E-27 T 11-11-2016 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 225 38.075 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 Pfam PF03167 Uracil DNA glycosylase superfamily 60 213 2.6E-20 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 217 3.1E-76 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 63 72 - T 11-11-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 SUPERFAMILY SSF52141 7 226 4.36E-84 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 SMART SM00986 55 214 1.4E-31 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 SMART SM00987 55 214 1.4E-31 T 11-11-2016 WS_RS02730 5c4abe0113cfae3c55bfb2751081a9ac 228 Gene3D G3DSA:3.40.470.10 4 226 4.7E-90 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 WS_RS09130 f753897dc110a5e575b1759f2a0300b4 370 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 11-11-2016 IPR000808 Mrp, conserved site GO:0005524 WS_RS09130 f753897dc110a5e575b1759f2a0300b4 370 Gene3D G3DSA:3.40.50.300 91 337 1.8E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09130 f753897dc110a5e575b1759f2a0300b4 370 SUPERFAMILY SSF52540 85 325 9.04E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09130 f753897dc110a5e575b1759f2a0300b4 370 SUPERFAMILY SSF117916 4 80 1.47E-8 T 11-11-2016 WS_RS09130 f753897dc110a5e575b1759f2a0300b4 370 Pfam PF01883 Domain of unknown function DUF59 4 66 7.6E-5 T 11-11-2016 IPR002744 Domain of unknown function DUF59 WS_RS09130 f753897dc110a5e575b1759f2a0300b4 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 338 7.8E-98 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein WS_RS09130 f753897dc110a5e575b1759f2a0300b4 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 90 353 37.077 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 Gene3D G3DSA:3.30.300.10 244 384 1.0E-65 T 11-11-2016 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 6.3E-38 T 11-11-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 Gene3D G3DSA:3.30.300.10 12 132 2.9E-41 T 11-11-2016 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 PIRSF PIRSF000497 1 384 1.5E-166 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 383 56.499 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 SUPERFAMILY SSF55973 110 232 4.32E-51 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 7.4E-45 T 11-11-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 Gene3D G3DSA:3.30.300.10 133 233 3.7E-42 T 11-11-2016 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 381 5.3E-182 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 SUPERFAMILY SSF55973 233 385 4.71E-66 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 SUPERFAMILY SSF55973 4 110 7.46E-42 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS09375 1ace4ad8633a7e6f84eef26c8392b4e7 386 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 372 3.1E-65 T 11-11-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 WS_RS10480 e1023e6d11831d44a2d1683f6e138bd0 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 223 1.3E-69 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 WS_RS10480 e1023e6d11831d44a2d1683f6e138bd0 223 Gene3D G3DSA:3.20.20.10 2 222 1.2E-73 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS10480 e1023e6d11831d44a2d1683f6e138bd0 223 PIRSF PIRSF004848 1 223 1.0E-66 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 WS_RS10480 e1023e6d11831d44a2d1683f6e138bd0 223 Pfam PF01168 Alanine racemase, N-terminal domain 17 222 1.0E-20 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS10480 e1023e6d11831d44a2d1683f6e138bd0 223 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 WS_RS10480 e1023e6d11831d44a2d1683f6e138bd0 223 SUPERFAMILY SSF51419 1 221 1.11E-64 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 SUPERFAMILY SSF158472 154 197 1.83E-5 T 11-11-2016 WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 SUPERFAMILY SSF47384 186 255 2.75E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 SMART SM00387 305 406 2.9E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 SUPERFAMILY SSF55874 270 397 9.82E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 Gene3D G3DSA:3.30.565.10 264 397 1.6E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 Gene3D G3DSA:1.10.287.130 194 252 2.6E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 383 9.7E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08545 b2f33f4624621f054d61b95ac116c21b 409 Pfam PF00672 HAMP domain 133 197 2.0E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS02815 b076df41dcf4d33dbcc15e4de27121f3 390 SUPERFAMILY SSF52440 178 288 1.52E-13 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS02815 b076df41dcf4d33dbcc15e4de27121f3 390 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 389 1.2E-112 T 11-11-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain WS_RS02815 b076df41dcf4d33dbcc15e4de27121f3 390 SUPERFAMILY SSF56059 12 162 2.44E-56 T 11-11-2016 WS_RS02815 b076df41dcf4d33dbcc15e4de27121f3 390 SUPERFAMILY SSF56059 275 388 2.44E-56 T 11-11-2016 WS_RS06820 ad01f0caf2bb63bea30b62f36e742afa 216 Pfam PF02613 Nitrate reductase delta subunit 54 166 5.0E-22 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS06820 ad01f0caf2bb63bea30b62f36e742afa 216 SUPERFAMILY SSF89155 2 207 1.57E-39 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS06820 ad01f0caf2bb63bea30b62f36e742afa 216 Gene3D G3DSA:1.10.3480.10 3 208 1.2E-36 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS00245 0e62bb30895bd104ad6d39f4e61cb79f 313 Pfam PF00535 Glycosyl transferase family 2 10 109 2.1E-23 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 WS_RS00245 0e62bb30895bd104ad6d39f4e61cb79f 313 SUPERFAMILY SSF53448 7 225 3.07E-33 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS00245 0e62bb30895bd104ad6d39f4e61cb79f 313 Gene3D G3DSA:3.90.550.10 7 259 8.2E-30 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS03155 fd0ffbe3d7658725affead59b70eb711 252 Pfam PF10670 Domain of unknown function (DUF4198) 19 224 9.6E-51 T 11-11-2016 IPR019613 Protein of unknown function DUF4198 WS_RS09700 f362c89abc5e088a9d8afb2de9ddd0f0 284 SUPERFAMILY SSF55681 5 279 1.09E-34 T 11-11-2016 WS_RS09700 f362c89abc5e088a9d8afb2de9ddd0f0 284 Gene3D G3DSA:3.30.930.10 5 281 1.5E-30 T 11-11-2016 WS_RS09700 f362c89abc5e088a9d8afb2de9ddd0f0 284 Pfam PF13393 Histidyl-tRNA synthetase 18 272 3.8E-20 T 11-11-2016 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 66 1.6E-29 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal WS_RS02295 d3032d2b20b4442b514e14825092371d 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 11-11-2016 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 Gene3D G3DSA:1.10.10.250 72 140 1.9E-28 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 Gene3D G3DSA:3.30.1550.10 2 71 6.0E-36 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal WS_RS02295 d3032d2b20b4442b514e14825092371d 141 SUPERFAMILY SSF54747 3 71 3.4E-29 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal WS_RS02295 d3032d2b20b4442b514e14825092371d 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.9E-63 T 11-11-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 SUPERFAMILY SSF46906 67 139 5.63E-25 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 29.493 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 6.8E-23 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 SMART SM00649 9 140 6.2E-79 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 WS_RS02295 d3032d2b20b4442b514e14825092371d 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-11-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 203 407 1.8E-75 T 11-11-2016 IPR000523 Magnesium chelatase ChlI domain WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 413 505 6.1E-26 T 11-11-2016 IPR025158 Mg chelatase-related protein, C-terminal domain WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 505 2.3E-131 T 11-11-2016 IPR004482 Mg chelatase-related protein WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 Gene3D G3DSA:3.40.50.300 203 400 6.5E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 SUPERFAMILY SSF52540 202 506 9.09E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 144 1.7E-33 T 11-11-2016 WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 303 318 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 Gene3D G3DSA:3.30.230.10 5 169 1.1E-21 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS10425 1381fc5418ebef208f6223b2462122d9 507 SUPERFAMILY SSF54211 8 170 3.79E-23 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS05715 8c4f1cda5d7645e625645985983182e2 189 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 189 9.8E-70 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 WS_RS05715 8c4f1cda5d7645e625645985983182e2 189 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 189 34.929 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 WS_RS05715 8c4f1cda5d7645e625645985983182e2 189 Pfam PF00925 GTP cyclohydrolase II 8 157 1.2E-56 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 WS_RS05715 8c4f1cda5d7645e625645985983182e2 189 SUPERFAMILY SSF142695 6 157 1.96E-49 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 PIRSF PIRSF017184 5 461 3.9E-93 T 11-11-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 212 462 15.189 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 SUPERFAMILY SSF64153 7 234 1.44E-46 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 218 458 5.4E-43 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 197 19.359 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 Pfam PF03853 YjeF-related protein N-terminus 25 175 8.9E-31 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 Pfam PF01256 Carbohydrate kinase 236 456 9.1E-35 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 197 1.1E-34 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 Gene3D G3DSA:3.40.50.10260 7 203 3.5E-47 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 SUPERFAMILY SSF53613 219 460 2.25E-46 T 11-11-2016 IPR029056 Ribokinase-like WS_RS04570 2eea0cd5ba35ff9300d5635dccde9952 462 Gene3D G3DSA:3.40.1190.20 209 459 4.0E-52 T 11-11-2016 IPR029056 Ribokinase-like WS_RS09720 6d3c12a635a6222132b7d1ceb9d41944 330 Gene3D G3DSA:3.40.50.720 2 247 3.5E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09720 6d3c12a635a6222132b7d1ceb9d41944 330 SUPERFAMILY SSF51735 1 266 1.91E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09720 6d3c12a635a6222132b7d1ceb9d41944 330 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 1.2E-105 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain WS_RS09720 6d3c12a635a6222132b7d1ceb9d41944 330 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 1.4E-168 T 11-11-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 WS_RS01460 19afacd3381293ce4d89194ed99e3b53 228 Gene3D G3DSA:3.20.20.70 2 227 1.2E-65 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01460 19afacd3381293ce4d89194ed99e3b53 228 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 228 31.035 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS01460 19afacd3381293ce4d89194ed99e3b53 228 SMART SM00934 2 223 5.6E-73 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS01460 19afacd3381293ce4d89194ed99e3b53 228 SUPERFAMILY SSF51366 2 225 7.66E-57 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 WS_RS01460 19afacd3381293ce4d89194ed99e3b53 228 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 223 2.4E-55 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS01460 19afacd3381293ce4d89194ed99e3b53 228 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 1 223 2.2E-38 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS01460 19afacd3381293ce4d89194ed99e3b53 228 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 11-11-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 331 1.7E-26 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 164 4.4E-13 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 335 40.29 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 SUPERFAMILY SSF56042 175 333 1.64E-44 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 Gene3D G3DSA:3.30.1330.10 23 169 1.5E-55 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 316 5.8E-118 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 SUPERFAMILY SSF55326 7 168 2.09E-47 T 11-11-2016 WS_RS10200 5350aafbc9186ac20c94a91d7fd1d872 336 Gene3D G3DSA:3.90.650.10 175 334 1.1E-48 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 59 69 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 86 103 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 69 79 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 6 66 9.5E-21 T 11-11-2016 WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 122 180 9.5E-21 T 11-11-2016 WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 67 110 3.2E-22 T 11-11-2016 WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 SUPERFAMILY SSF54862 1 184 2.2E-50 T 11-11-2016 WS_RS03540 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Pfam PF13247 4Fe-4S dicluster domain 56 168 2.2E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 59 69 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 86 103 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 69 79 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 6 66 9.5E-21 T 11-11-2016 WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 122 180 9.5E-21 T 11-11-2016 WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 67 110 3.2E-22 T 11-11-2016 WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 SUPERFAMILY SSF54862 1 184 2.2E-50 T 11-11-2016 WS_RS00145 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Pfam PF13247 4Fe-4S dicluster domain 56 168 2.2E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 59 69 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 86 103 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 PRINTS PR00354 7Fe ferredoxin signature 69 79 7.1E-6 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 6 66 9.5E-21 T 11-11-2016 WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 122 180 9.5E-21 T 11-11-2016 WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Gene3D G3DSA:3.30.70.20 67 110 3.2E-22 T 11-11-2016 WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 SUPERFAMILY SSF54862 1 184 2.2E-50 T 11-11-2016 WS_RS05495 61c2a7bdeb6e2bf3a5499113d3b35a84 200 Pfam PF13247 4Fe-4S dicluster domain 56 168 2.2E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS09840 c648b451b695a5e504059ec79db14440 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 11-11-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS09840 c648b451b695a5e504059ec79db14440 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 328 35.682 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS09840 c648b451b695a5e504059ec79db14440 334 SMART SM00859 2 138 5.2E-38 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 WS_RS09840 c648b451b695a5e504059ec79db14440 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 166 304 2.0E-13 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS09840 c648b451b695a5e504059ec79db14440 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 334 5.3E-103 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 WS_RS09840 c648b451b695a5e504059ec79db14440 334 Gene3D G3DSA:3.40.50.720 2 151 2.3E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09840 c648b451b695a5e504059ec79db14440 334 Gene3D G3DSA:3.30.360.10 152 302 3.0E-44 T 11-11-2016 WS_RS09840 c648b451b695a5e504059ec79db14440 334 SUPERFAMILY SSF51735 2 162 3.26E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09840 c648b451b695a5e504059ec79db14440 334 SUPERFAMILY SSF55347 146 302 3.6E-40 T 11-11-2016 WS_RS09840 c648b451b695a5e504059ec79db14440 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 138 2.3E-29 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 WS_RS05825 6198aaa9ec6d6b47008db6300cb89fe0 144 Pfam PF02566 OsmC-like protein 34 128 3.5E-12 T 11-11-2016 IPR003718 OsmC/Ohr family WS_RS05825 6198aaa9ec6d6b47008db6300cb89fe0 144 Gene3D G3DSA:3.30.300.20 37 132 3.7E-19 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS05825 6198aaa9ec6d6b47008db6300cb89fe0 144 SUPERFAMILY SSF82784 9 132 6.02E-24 T 11-11-2016 IPR003718 OsmC/Ohr family WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 SUPERFAMILY SSF56762 198 544 4.58E-105 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 Pfam PF00374 Nickel-dependent hydrogenase 224 292 3.4E-13 T 11-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 31 157 1.8E-22 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 Gene3D G3DSA:1.10.645.10 177 543 1.2E-75 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 473 544 1.4E-9 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 302 468 4.5E-41 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 SUPERFAMILY SSF143243 7 200 1.7E-42 T 11-11-2016 WS_RS08640 85f527ee05db1a729c9e57cf61d2a3a6 579 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 93 144 2.0E-23 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 Pfam PF07196 Flagellin hook IN motif 272 325 6.9E-7 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 SUPERFAMILY SSF117143 92 201 7.19E-61 T 11-11-2016 WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 SUPERFAMILY SSF117143 470 676 7.19E-61 T 11-11-2016 WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 367 4.9E-44 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 403 697 4.4E-42 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-11 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 Pfam PF07559 Flagellar basal body protein FlaE 480 596 1.6E-12 T 11-11-2016 IPR011491 Flagellar hook protein FlgE WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 TIGRFAM TIGR02489 flgE_epsilon: flagellar hook protein FlgE 1 716 0.0 T 11-11-2016 IPR012835 Flagellar hook FlgE GO:0009288|GO:0044781 WS_RS08275 7688eeecc75d3320621799de4ebe75a7 716 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 637 714 1.7E-20 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 SUPERFAMILY SSF52335 2 190 2.88E-67 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 Gene3D G3DSA:3.40.140.20 356 500 2.0E-45 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 Gene3D G3DSA:3.40.50.1380 2 182 7.4E-78 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 SMART SM00851 12 126 2.3E-51 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 Gene3D G3DSA:3.40.140.20 233 348 3.1E-35 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 131 441 2.0E-92 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 5.0E-162 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 37.518 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 Pfam PF02142 MGS-like domain 12 125 1.8E-24 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 SUPERFAMILY SSF53927 204 510 1.6E-104 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 SMART SM00798 131 442 4.9E-147 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS08855 26e7d4eddf0a592ae42352942ef1bf5a 510 PIRSF PIRSF000414 1 510 8.0E-188 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 43.754 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 Gene3D G3DSA:3.40.50.170 82 274 4.2E-53 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 SUPERFAMILY SSF53328 84 277 1.83E-58 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 PIRSF PIRSF036480 1 277 5.2E-113 T 11-11-2016 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.1E-114 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 Gene3D G3DSA:3.30.70.260 1 72 7.5E-14 T 11-11-2016 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 Pfam PF00551 Formyl transferase 84 259 8.0E-45 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.1E-57 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.1E-57 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.1E-57 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.1E-57 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.1E-57 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.1E-57 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS07025 7e347a010b9817dfac8362cac0a6d9e0 277 SUPERFAMILY SSF55021 3 66 1.37E-9 T 11-11-2016 WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SMART SM00052 428 676 3.6E-105 T 11-11-2016 IPR001633 EAL domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SUPERFAMILY SSF141868 434 674 6.02E-82 T 11-11-2016 IPR001633 EAL domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SUPERFAMILY SSF55073 257 419 3.61E-39 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Pfam PF00563 EAL domain 434 671 1.5E-71 T 11-11-2016 IPR001633 EAL domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Gene3D G3DSA:3.30.70.270 254 424 1.1E-46 T 11-11-2016 WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SMART SM00267 241 418 1.8E-39 T 11-11-2016 IPR000160 GGDEF domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 416 2.6E-32 T 11-11-2016 IPR000160 GGDEF domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 413 2.8E-37 T 11-11-2016 IPR000160 GGDEF domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SMART SM00091 133 199 5.0E-10 T 11-11-2016 IPR000014 PAS domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SMART SM00091 13 75 2.6 T 11-11-2016 IPR000014 PAS domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Gene3D G3DSA:3.30.450.20 5 64 1.3E-5 T 11-11-2016 WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Gene3D G3DSA:3.30.450.20 135 239 2.6E-13 T 11-11-2016 WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Gene3D G3DSA:3.20.20.450 431 674 5.7E-90 T 11-11-2016 IPR001633 EAL domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Pfam PF13426 PAS domain 29 116 0.0044 T 11-11-2016 IPR000014 PAS domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 Pfam PF13426 PAS domain 144 240 8.1E-10 T 11-11-2016 IPR000014 PAS domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 248 1.6E-15 T 11-11-2016 IPR000014 PAS domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SUPERFAMILY SSF55785 16 117 1.08E-7 T 11-11-2016 IPR000014 PAS domain WS_RS04510 65b376b8294f514c799d2fcae23e5ffe 678 SUPERFAMILY SSF55785 144 248 4.19E-15 T 11-11-2016 IPR000014 PAS domain WS_RS09745 aeb3a3965d3fcdd5da9f2e6f66f18f45 181 Gene3D G3DSA:2.60.450.10 21 151 2.3E-23 T 11-11-2016 WS_RS09745 aeb3a3965d3fcdd5da9f2e6f66f18f45 181 Pfam PF03968 OstA-like protein 25 136 7.5E-23 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal WS_RS09745 aeb3a3965d3fcdd5da9f2e6f66f18f45 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 155 3.2E-24 T 11-11-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 WS_RS00900 0615fe4002eb8513c407718a20d3d7f3 288 PIRSF PIRSF028756 2 274 5.3E-113 T 11-11-2016 IPR016898 Polyphosphate kinase 2 WS_RS00900 0615fe4002eb8513c407718a20d3d7f3 288 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 24 249 4.6E-98 T 11-11-2016 IPR022488 Polyphosphate kinase-2-related WS_RS00900 0615fe4002eb8513c407718a20d3d7f3 288 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 24 250 1.0E-110 T 11-11-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 WS_RS00900 0615fe4002eb8513c407718a20d3d7f3 288 Gene3D G3DSA:3.40.50.300 3 252 3.1E-102 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00900 0615fe4002eb8513c407718a20d3d7f3 288 SUPERFAMILY SSF52540 55 242 1.14E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08400 4f7b48c87bdf8a96a5b2aa4020a9cd1d 181 Gene3D G3DSA:3.90.80.10 9 171 7.2E-60 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 WS_RS08400 4f7b48c87bdf8a96a5b2aa4020a9cd1d 181 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 13 172 35.433 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 WS_RS08400 4f7b48c87bdf8a96a5b2aa4020a9cd1d 181 Pfam PF00719 Inorganic pyrophosphatase 17 171 1.0E-54 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 WS_RS08400 4f7b48c87bdf8a96a5b2aa4020a9cd1d 181 SUPERFAMILY SSF50324 10 171 3.14E-64 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 WS_RS01400 c9a815ec5ee3713c5ca503a26787b6c8 124 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 7 121 2.6E-42 T 11-11-2016 IPR030907 Ferritin-like protein WS_RS01400 c9a815ec5ee3713c5ca503a26787b6c8 124 SUPERFAMILY SSF47240 10 92 3.72E-20 T 11-11-2016 IPR009078 Ferritin-like superfamily WS_RS01400 c9a815ec5ee3713c5ca503a26787b6c8 124 Gene3D G3DSA:1.20.1260.10 25 74 3.8E-12 T 11-11-2016 IPR012347 Ferritin-related WS_RS01400 c9a815ec5ee3713c5ca503a26787b6c8 124 TIGRFAM TIGR04537 encap_target: encapsulation C-terminal sorting signal 113 122 0.05 T 11-11-2016 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 Pfam PF00814 Glycoprotease family 24 303 4.9E-79 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 ProSitePatterns PS01016 Glycoprotease family signature. 92 112 - T 11-11-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 SUPERFAMILY SSF53067 97 307 1.68E-32 T 11-11-2016 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 310 3.6E-109 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 SUPERFAMILY SSF53067 1 118 7.77E-19 T 11-11-2016 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 303 1.2E-100 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 Gene3D G3DSA:3.30.420.40 1 154 6.2E-28 T 11-11-2016 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 329 54.834 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 3 16 5.0E-38 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 93 112 5.0E-38 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 126 138 5.0E-38 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 72 92 5.0E-38 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 260 269 5.0E-38 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS07550 bdf48a8bb0325250c737199037d6157d 331 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 149 170 5.0E-38 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Hamap MF_00050 Elongation factor Ts [tsf]. 1 354 62.515 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 SUPERFAMILY SSF46934 4 55 2.04E-20 T 11-11-2016 IPR009060 UBA-like GO:0005515 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Gene3D G3DSA:3.30.479.20 186 201 1.7E-32 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Gene3D G3DSA:3.30.479.20 57 95 1.7E-32 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Gene3D G3DSA:3.30.479.20 296 340 1.7E-32 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 SUPERFAMILY SSF54713 186 200 5.23E-28 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 SUPERFAMILY SSF54713 275 337 5.23E-28 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 SUPERFAMILY SSF54713 54 95 5.23E-28 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Gene3D G3DSA:1.10.8.10 2 55 4.5E-29 T 11-11-2016 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 SUPERFAMILY SSF54713 153 226 6.21E-13 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Gene3D G3DSA:1.10.286.20 245 287 1.7E-7 T 11-11-2016 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 226 1.8E-77 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 239 354 4.2E-33 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Pfam PF00889 Elongation factor TS 239 337 5.4E-24 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 Pfam PF00889 Elongation factor TS 73 225 3.3E-45 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS00980 0d4fe88c315c3219cf5eef4f3df15e32 355 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS10435 1ca27530c7757f40a776cc81987beb47 194 Pfam PF04264 YceI-like domain 24 191 4.5E-41 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like WS_RS10435 1ca27530c7757f40a776cc81987beb47 194 SUPERFAMILY SSF101874 23 193 1.22E-50 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like WS_RS10435 1ca27530c7757f40a776cc81987beb47 194 SMART SM00867 23 192 3.2E-67 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like WS_RS10435 1ca27530c7757f40a776cc81987beb47 194 Gene3D G3DSA:2.40.128.110 23 193 2.7E-56 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like WS_RS03130 0e77655fda3116bcd953756c2b6a4641 229 SMART SM00448 6 117 2.9E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03130 0e77655fda3116bcd953756c2b6a4641 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 3.6E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS03130 0e77655fda3116bcd953756c2b6a4641 229 SUPERFAMILY SSF52172 6 184 6.45E-37 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS03130 0e77655fda3116bcd953756c2b6a4641 229 Gene3D G3DSA:3.40.50.2300 6 123 1.9E-34 T 11-11-2016 WS_RS03130 0e77655fda3116bcd953756c2b6a4641 229 Pfam PF00072 Response regulator receiver domain 8 118 2.3E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03130 0e77655fda3116bcd953756c2b6a4641 229 Gene3D G3DSA:1.10.10.10 132 226 1.9E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03130 0e77655fda3116bcd953756c2b6a4641 229 SMART SM00862 151 226 2.9E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS08205 c023f7cb37fadaaa12ad62efa3f75cc9 488 SUPERFAMILY SSF116726 415 475 3.14E-11 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS08205 c023f7cb37fadaaa12ad62efa3f75cc9 488 Pfam PF02080 TrkA-C domain 417 473 1.6E-12 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS08205 c023f7cb37fadaaa12ad62efa3f75cc9 488 Pfam PF00999 Sodium/hydrogen exchanger family 13 389 1.8E-50 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 WS_RS08205 c023f7cb37fadaaa12ad62efa3f75cc9 488 Gene3D G3DSA:3.30.70.1450 414 472 1.2E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 260 3.5E-40 T 11-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 SUPERFAMILY SSF53335 3 260 1.3E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 62 - T 11-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 Gene3D G3DSA:1.10.8.100 199 259 9.7E-7 T 11-11-2016 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 257 5.4E-65 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 3 259 44.224 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 Gene3D G3DSA:3.40.50.150 2 192 6.5E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00310 25e7eb2aed557eaac2db3e396c6e9318 272 SMART SM00650 19 193 3.7E-48 T 11-11-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 WS_RS06925 2bf797f2295cb215acc2c538a299a472 86 Pfam PF00403 Heavy-metal-associated domain 5 60 1.3E-9 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS06925 2bf797f2295cb215acc2c538a299a472 86 SUPERFAMILY SSF55008 1 63 1.57E-10 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 WS_RS06925 2bf797f2295cb215acc2c538a299a472 86 Gene3D G3DSA:3.30.70.100 1 62 9.7E-13 T 11-11-2016 WS_RS04475 952b64890a2728eb06d2f83bceb0d78c 135 Gene3D G3DSA:3.30.70.260 1 47 6.2E-9 T 11-11-2016 WS_RS04475 952b64890a2728eb06d2f83bceb0d78c 135 SUPERFAMILY SSF55021 2 66 2.18E-12 T 11-11-2016 WS_RS04475 952b64890a2728eb06d2f83bceb0d78c 135 Pfam PF01842 ACT domain 5 40 1.0E-6 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 WS_RS04475 952b64890a2728eb06d2f83bceb0d78c 135 SUPERFAMILY SSF55021 74 132 2.7E-5 T 11-11-2016 WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 22 470 45.496 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 Pfam PF13537 Glutamine amidotransferase domain 92 224 1.3E-18 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 PIRSF PIRSF000485 19 470 2.2E-172 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 Gene3D G3DSA:3.60.20.10 23 269 1.6E-59 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 Gene3D G3DSA:3.40.50.2020 282 447 1.9E-43 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 Pfam PF00156 Phosphoribosyl transferase domain 290 396 4.4E-9 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 23 468 1.6E-162 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 SUPERFAMILY SSF53271 261 470 1.56E-68 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS02235 283b0f0c1cb16561cb90bf0e9b33d4d0 470 SUPERFAMILY SSF56235 23 268 2.23E-61 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 169 5.3E-9 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 214 247 2.9E-5 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 133 8.1E-5 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 SUPERFAMILY SSF51161 30 305 3.58E-71 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 316 34.213 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 Gene3D G3DSA:2.160.10.10 99 195 4.7E-24 T 11-11-2016 WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 20 87 1.7E-18 T 11-11-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 315 1.6E-115 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 WS_RS00480 4b613c145602b34855ebd4939081c9a9 318 Gene3D G3DSA:2.160.10.10 196 308 3.4E-20 T 11-11-2016 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 11-11-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 Pfam PF00347 Ribosomal protein L6 11 80 1.5E-4 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 Pfam PF00347 Ribosomal protein L6 91 163 5.6E-21 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 PIRSF PIRSF002162 1 176 3.0E-43 T 11-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 SUPERFAMILY SSF56053 83 175 3.9E-35 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 Gene3D G3DSA:3.90.930.12 83 176 9.9E-39 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 SUPERFAMILY SSF56053 2 82 3.4E-16 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 33.792 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 Gene3D G3DSA:3.90.930.12 2 82 3.9E-18 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 1.1E-65 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.3E-32 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.3E-32 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 WS_RS08015 b5fa022737820f251b23ed52c56ff6db 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 5.3E-32 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 WS_RS02660 96191901ec1ce32c4658aec4a5cec497 307 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 220 282 1.4E-9 T 11-11-2016 WS_RS02660 96191901ec1ce32c4658aec4a5cec497 307 Gene3D G3DSA:1.25.40.10 211 285 4.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02660 96191901ec1ce32c4658aec4a5cec497 307 SUPERFAMILY SSF48452 217 287 5.0E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS00335 8befefb446c5e4335aad33f6db16f374 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 137 1.2E-25 T 11-11-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 WS_RS00335 8befefb446c5e4335aad33f6db16f374 147 Pfam PF00583 Acetyltransferase (GNAT) family 49 124 1.1E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 WS_RS00335 8befefb446c5e4335aad33f6db16f374 147 Gene3D G3DSA:3.40.630.30 2 146 6.9E-33 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00335 8befefb446c5e4335aad33f6db16f374 147 SUPERFAMILY SSF55729 1 146 3.71E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00260 9cec750a67232bd0c104221717dc9e14 219 Pfam PF00072 Response regulator receiver domain 3 111 2.1E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00260 9cec750a67232bd0c104221717dc9e14 219 SMART SM00448 1 111 1.1E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00260 9cec750a67232bd0c104221717dc9e14 219 Gene3D G3DSA:1.10.10.10 142 213 1.1E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS00260 9cec750a67232bd0c104221717dc9e14 219 SMART SM00862 141 212 2.0E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS00260 9cec750a67232bd0c104221717dc9e14 219 SUPERFAMILY SSF52172 1 162 4.41E-28 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS00260 9cec750a67232bd0c104221717dc9e14 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 212 9.0E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS00260 9cec750a67232bd0c104221717dc9e14 219 Gene3D G3DSA:3.40.50.2300 1 141 3.4E-29 T 11-11-2016 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 SUPERFAMILY SSF50692 707 847 2.49E-21 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 SUPERFAMILY SSF53706 328 712 4.19E-139 T 11-11-2016 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 SUPERFAMILY SSF53706 39 294 4.19E-139 T 11-11-2016 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Pfam PF00384 Molybdopterin oxidoreductase 95 553 3.5E-38 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 39 91 1.9E-11 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Gene3D G3DSA:3.40.228.10 175 393 3.7E-44 T 11-11-2016 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 SMART SM00926 38 92 4.5E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Gene3D G3DSA:2.20.25.90 39 96 1.3E-18 T 11-11-2016 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Gene3D G3DSA:2.40.40.20 695 847 2.0E-25 T 11-11-2016 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Pfam PF01568 Molydopterin dinucleotide binding domain 745 836 2.8E-10 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 1.9E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Gene3D G3DSA:3.40.50.740 394 657 3.4E-41 T 11-11-2016 WS_RS03675 3bcf785fd208a2368936f757a2b86ba0 848 Gene3D G3DSA:3.40.50.740 97 174 3.4E-41 T 11-11-2016 WS_RS07375 4884bfdd20208c2411bc72ff6cab2fb6 216 Gene3D G3DSA:3.40.50.300 3 214 2.2E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07375 4884bfdd20208c2411bc72ff6cab2fb6 216 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS07375 4884bfdd20208c2411bc72ff6cab2fb6 216 SUPERFAMILY SSF52540 3 214 1.98E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07375 4884bfdd20208c2411bc72ff6cab2fb6 216 Pfam PF00005 ABC transporter 20 165 4.2E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS07375 4884bfdd20208c2411bc72ff6cab2fb6 216 SMART SM00382 29 213 1.8E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06295 ecab28c6d711c85b3b16806b0a34928a 271 SUPERFAMILY SSF81345 5 260 3.79E-30 T 11-11-2016 IPR029022 ABC transporter, BtuC-like WS_RS06295 ecab28c6d711c85b3b16806b0a34928a 271 Gene3D G3DSA:1.10.3470.10 42 261 5.8E-5 T 11-11-2016 IPR029022 ABC transporter, BtuC-like WS_RS06295 ecab28c6d711c85b3b16806b0a34928a 271 Pfam PF00950 ABC 3 transport family 7 257 4.4E-64 T 11-11-2016 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 WS_RS02565 15d58f856d246e1f4bbb9588aa95f25e 421 Pfam PF04052 TolB amino-terminal domain 20 118 7.0E-10 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 WS_RS02565 15d58f856d246e1f4bbb9588aa95f25e 421 Gene3D G3DSA:2.130.10.10 140 404 1.3E-37 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS02565 15d58f856d246e1f4bbb9588aa95f25e 421 Hamap MF_00671 Protein TolB [tolB]. 1 421 26.249 T 11-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 WS_RS02565 15d58f856d246e1f4bbb9588aa95f25e 421 SUPERFAMILY SSF69304 171 421 1.23E-32 T 11-11-2016 WS_RS08220 34339db4c04e797c22a4b812002563e1 250 SUPERFAMILY SSF52833 103 247 3.08E-11 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS08220 34339db4c04e797c22a4b812002563e1 250 Gene3D G3DSA:3.40.30.10 138 247 1.5E-8 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS07600 af31401d0ed4eadd02feee3c8e536377 260 Gene3D G3DSA:1.10.10.60 5 59 5.8E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS07600 af31401d0ed4eadd02feee3c8e536377 260 SMART SM00342 25 107 1.5E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS07600 af31401d0ed4eadd02feee3c8e536377 260 SUPERFAMILY SSF46689 9 58 1.61E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS07600 af31401d0ed4eadd02feee3c8e536377 260 Pfam PF12833 Helix-turn-helix domain 31 109 3.6E-15 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS07600 af31401d0ed4eadd02feee3c8e536377 260 SUPERFAMILY SSF53155 114 182 9.42E-12 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 WS_RS07600 af31401d0ed4eadd02feee3c8e536377 260 Gene3D G3DSA:3.30.160.70 107 182 1.3E-14 T 11-11-2016 WS_RS07600 af31401d0ed4eadd02feee3c8e536377 260 Gene3D G3DSA:1.10.10.60 63 106 1.1E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS09325 a9919665e5df7d51108392985934df76 1178 Gene3D G3DSA:3.20.20.140 6 269 4.9E-47 T 11-11-2016 WS_RS09325 a9919665e5df7d51108392985934df76 1178 Pfam PF02811 PHP domain 7 186 1.0E-51 T 11-11-2016 IPR004013 PHP domain GO:0003824 WS_RS09325 a9919665e5df7d51108392985934df76 1178 Gene3D G3DSA:1.10.150.280 858 905 2.9E-6 T 11-11-2016 WS_RS09325 a9919665e5df7d51108392985934df76 1178 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1052 0.0 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS09325 a9919665e5df7d51108392985934df76 1178 Pfam PF14579 Helix-hairpin-helix motif 829 921 2.1E-22 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS09325 a9919665e5df7d51108392985934df76 1178 SMART SM00481 6 73 1.4E-31 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 WS_RS09325 a9919665e5df7d51108392985934df76 1178 SUPERFAMILY SSF160975 838 897 4.58E-6 T 11-11-2016 WS_RS09325 a9919665e5df7d51108392985934df76 1178 SUPERFAMILY SSF89550 6 276 8.04E-35 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 WS_RS09325 a9919665e5df7d51108392985934df76 1178 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 314 755 9.0E-178 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS03310 533762716e3dd7c93d090141a36325a5 189 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 32 184 1.1E-65 T 11-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 WS_RS03310 533762716e3dd7c93d090141a36325a5 189 SUPERFAMILY SSF53697 1 186 5.46E-57 T 11-11-2016 WS_RS03310 533762716e3dd7c93d090141a36325a5 189 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 38.075 T 11-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 WS_RS03310 533762716e3dd7c93d090141a36325a5 189 Gene3D G3DSA:3.40.50.10490 1 186 4.3E-63 T 11-11-2016 WS_RS03310 533762716e3dd7c93d090141a36325a5 189 Pfam PF13580 SIS domain 17 144 4.2E-30 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 WS_RS05410 0e5440ee913c42b28d50181eac408ae0 267 Gene3D G3DSA:3.40.50.150 49 161 6.5E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05410 0e5440ee913c42b28d50181eac408ae0 267 Pfam PF13649 Methyltransferase domain 65 151 1.7E-11 T 11-11-2016 WS_RS05410 0e5440ee913c42b28d50181eac408ae0 267 SUPERFAMILY SSF53335 48 200 7.63E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 SUPERFAMILY SSF141868 510 737 5.75E-60 T 11-11-2016 IPR001633 EAL domain WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 485 6.3E-13 T 11-11-2016 IPR000160 GGDEF domain WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 SMART SM00052 504 742 7.9E-46 T 11-11-2016 IPR001633 EAL domain WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 Pfam PF00563 EAL domain 511 737 1.2E-56 T 11-11-2016 IPR001633 EAL domain WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 Pfam PF14827 Double sensory domain of two-component sensor kinase 60 288 9.5E-10 T 11-11-2016 IPR029150 Double Cache domain 3 WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 Gene3D G3DSA:3.20.20.450 508 738 7.4E-60 T 11-11-2016 IPR001633 EAL domain WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 Pfam PF00990 Diguanylate cyclase, GGDEF domain 345 485 1.5E-19 T 11-11-2016 IPR000160 GGDEF domain WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 Gene3D G3DSA:3.30.70.270 345 498 1.5E-20 T 11-11-2016 WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 SUPERFAMILY SSF55073 349 489 7.22E-20 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS00585 f992ae2daf58c86fa6d6e5a7e65da0e9 743 SMART SM00267 333 492 9.3E-14 T 11-11-2016 IPR000160 GGDEF domain WS_RS07395 4892c5f933385e393fae2eb761efcc9d 173 Pfam PF10634 Fe2+ transport protein 22 170 2.7E-66 T 11-11-2016 IPR018470 Periplasmic metal-binding protein Tp34-type WS_RS07395 4892c5f933385e393fae2eb761efcc9d 173 PIRSF PIRSF017018 1 173 4.4E-71 T 11-11-2016 IPR018470 Periplasmic metal-binding protein Tp34-type WS_RS06330 47fa5e82be532647735e8882f6cd8693 248 Gene3D G3DSA:3.30.2010.10 58 138 2.5E-17 T 11-11-2016 WS_RS06330 47fa5e82be532647735e8882f6cd8693 248 Pfam PF01435 Peptidase family M48 61 243 1.0E-40 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 WS_RS07540 4e095b13e8ae1a9785b3c4506eebf34e 333 Gene3D G3DSA:3.75.10.10 2 328 9.0E-125 T 11-11-2016 WS_RS07540 4e095b13e8ae1a9785b3c4506eebf34e 333 SUPERFAMILY SSF55909 2 328 2.5E-115 T 11-11-2016 WS_RS07540 4e095b13e8ae1a9785b3c4506eebf34e 333 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 3 327 5.6E-112 T 11-11-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 WS_RS03015 77bf64a016b2c8fad6b9e035276b18cf 205 Gene3D G3DSA:3.40.50.880 1 204 1.3E-75 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS03015 77bf64a016b2c8fad6b9e035276b18cf 205 SUPERFAMILY SSF52317 2 203 8.34E-54 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS03015 77bf64a016b2c8fad6b9e035276b18cf 205 Pfam PF00117 Glutamine amidotransferase class-I 11 201 1.1E-18 T 11-11-2016 IPR017926 Glutamine amidotransferase WS_RS03015 77bf64a016b2c8fad6b9e035276b18cf 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 6.1E-67 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 WS_RS03015 77bf64a016b2c8fad6b9e035276b18cf 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 34.172 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 WS_RS03015 77bf64a016b2c8fad6b9e035276b18cf 205 PIRSF PIRSF000495 1 205 1.6E-69 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 SMART SM01210 325 419 3.1E-31 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 SUPERFAMILY SSF51246 324 418 3.69E-22 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 4.4E-74 T 11-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Gene3D G3DSA:3.90.600.10 326 418 7.8E-24 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 4.0E-27 T 11-11-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 416 7.4E-18 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 SUPERFAMILY SSF52440 1 99 3.45E-27 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 38.585 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Gene3D G3DSA:3.40.50.20 2 91 9.5E-26 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS04270 895599586f16bab67e278a50d6752d1a 419 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 6.8E-141 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 SMART SM01209 99 291 2.0E-118 T 11-11-2016 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Gene3D G3DSA:3.30.470.20 187 323 1.6E-52 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 11-11-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 Gene3D G3DSA:3.30.1490.20 121 186 1.3E-26 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS04270 895599586f16bab67e278a50d6752d1a 419 SUPERFAMILY SSF56059 100 317 1.48E-57 T 11-11-2016 WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 277 8.9E-55 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 SUPERFAMILY SSF51735 1 347 4.77E-89 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.2E-28 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.2E-28 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 PRINTS PR01713 Nucleotide sugar epimerase signature 271 286 1.2E-28 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 PRINTS PR01713 Nucleotide sugar epimerase signature 310 327 1.2E-28 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 Gene3D G3DSA:3.90.25.10 199 347 3.7E-28 T 11-11-2016 WS_RS00125 6b18e56bb2344e441f739049a1bd0589 350 Gene3D G3DSA:3.40.50.720 1 198 8.8E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 Gene3D G3DSA:3.30.70.20 119 159 5.7E-9 T 11-11-2016 WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 Gene3D G3DSA:3.30.70.20 77 118 3.9E-5 T 11-11-2016 WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 Pfam PF00037 4Fe-4S binding domain 139 155 7.5E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 Gene3D G3DSA:3.30.70.20 36 76 9.1E-10 T 11-11-2016 WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 SUPERFAMILY SSF54862 37 158 5.02E-15 T 11-11-2016 WS_RS05615 eda655f3bb89f8c996e8b4d7abe371cd 165 Pfam PF13187 4Fe-4S dicluster domain 39 85 3.2E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS10720 15e4a408662f0c9e5b02ab544bfad96d 137 SUPERFAMILY SSF50331 6 132 3.4E-15 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal WS_RS10720 15e4a408662f0c9e5b02ab544bfad96d 137 Pfam PF03459 TOBE domain 73 133 9.5E-8 T 11-11-2016 IPR005116 Transport-associated OB, type 1 WS_RS10720 15e4a408662f0c9e5b02ab544bfad96d 137 Gene3D G3DSA:2.40.50.100 71 134 9.3E-17 T 11-11-2016 WS_RS10545 d3019465b34a4d452dc7b79ff7e36d6a 135 SUPERFAMILY SSF54523 7 127 1.41E-11 T 11-11-2016 WS_RS10545 d3019465b34a4d452dc7b79ff7e36d6a 135 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 4.9E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS10545 d3019465b34a4d452dc7b79ff7e36d6a 135 Gene3D G3DSA:3.30.700.10 7 50 1.3E-4 T 11-11-2016 WS_RS10545 d3019465b34a4d452dc7b79ff7e36d6a 135 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 23 2.2E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 SUPERFAMILY SSF54980 302 385 1.51E-9 T 11-11-2016 IPR009022 Elongation factor G, III-V domain WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Pfam PF03144 Elongation factor Tu domain 2 218 287 8.8E-12 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 SUPERFAMILY SSF50447 151 299 2.75E-31 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 PRINTS PR00315 GTP-binding elongation factor signature 70 80 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 PRINTS PR00315 GTP-binding elongation factor signature 122 131 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 PRINTS PR00315 GTP-binding elongation factor signature 86 97 1.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 1.1E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 SUPERFAMILY SSF52540 2 218 2.59E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 2.3E-285 T 11-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Pfam PF00679 Elongation factor G C-terminus 395 479 8.6E-22 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 2.2E-56 T 11-11-2016 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 SMART SM00838 393 481 0.0019 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Gene3D G3DSA:2.40.30.10 206 302 2.3E-28 T 11-11-2016 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Gene3D G3DSA:2.40.50.250 480 574 2.8E-40 T 11-11-2016 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Gene3D G3DSA:3.30.70.870 303 396 2.3E-28 T 11-11-2016 WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Gene3D G3DSA:3.30.70.240 397 479 3.3E-31 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 Gene3D G3DSA:3.40.50.300 2 205 1.1E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08295 f95c34e8aa1f4415068a79e32bdd309c 601 SUPERFAMILY SSF54980 396 510 1.39E-26 T 11-11-2016 IPR009022 Elongation factor G, III-V domain WS_RS03095 56163a49ce948b23badf82c434832a8c 462 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 16 456 1.7E-168 T 11-11-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 WS_RS03095 56163a49ce948b23badf82c434832a8c 462 Gene3D G3DSA:3.30.70.20 201 270 4.5E-8 T 11-11-2016 WS_RS03095 56163a49ce948b23badf82c434832a8c 462 Pfam PF12801 4Fe-4S binding domain 69 113 2.3E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS03095 56163a49ce948b23badf82c434832a8c 462 Gene3D G3DSA:2.60.40.10 335 457 4.3E-13 T 11-11-2016 IPR013783 Immunoglobulin-like fold WS_RS03095 56163a49ce948b23badf82c434832a8c 462 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 334 456 4.7E-24 T 11-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain WS_RS03095 56163a49ce948b23badf82c434832a8c 462 SUPERFAMILY SSF54862 165 334 1.34E-22 T 11-11-2016 WS_RS03095 56163a49ce948b23badf82c434832a8c 462 SUPERFAMILY SSF54862 80 102 1.34E-22 T 11-11-2016 WS_RS03095 56163a49ce948b23badf82c434832a8c 462 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 252 263 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS03095 56163a49ce948b23badf82c434832a8c 462 Pfam PF13746 4Fe-4S dicluster domain 197 303 1.5E-43 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS10675 55323975834be2a414090e8f563a7a33 224 PRINTS PR01374 Gram-negative bacterial tonB protein signature 70 80 3.7E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 WS_RS10675 55323975834be2a414090e8f563a7a33 224 PRINTS PR01374 Gram-negative bacterial tonB protein signature 144 165 3.7E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 WS_RS10675 55323975834be2a414090e8f563a7a33 224 PRINTS PR01374 Gram-negative bacterial tonB protein signature 165 183 3.7E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 WS_RS10675 55323975834be2a414090e8f563a7a33 224 SUPERFAMILY SSF74653 51 64 2.88E-14 T 11-11-2016 WS_RS10675 55323975834be2a414090e8f563a7a33 224 SUPERFAMILY SSF74653 125 223 2.88E-14 T 11-11-2016 WS_RS10675 55323975834be2a414090e8f563a7a33 224 Gene3D G3DSA:3.30.1150.10 132 222 2.1E-12 T 11-11-2016 WS_RS10675 55323975834be2a414090e8f563a7a33 224 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 151 223 2.9E-17 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 WS_RS10675 55323975834be2a414090e8f563a7a33 224 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 149 223 9.0E-16 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 WS_RS01450 ef17ae351ef0517f1c0917ef4dfd124d 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.461 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS01450 ef17ae351ef0517f1c0917ef4dfd124d 156 Gene3D G3DSA:3.40.50.960 3 154 3.9E-57 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS01450 ef17ae351ef0517f1c0917ef4dfd124d 156 SUPERFAMILY SSF52121 8 154 4.97E-55 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS01450 ef17ae351ef0517f1c0917ef4dfd124d 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 1.5E-50 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS01450 ef17ae351ef0517f1c0917ef4dfd124d 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 6.2E-53 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS04815 f18c15e2961645ae011dea78d3b74632 196 Pfam PF01206 Sulfurtransferase TusA 1 69 2.2E-15 T 11-11-2016 IPR001455 TusA-like domain WS_RS04815 f18c15e2961645ae011dea78d3b74632 196 SUPERFAMILY SSF64307 1 70 4.58E-16 T 11-11-2016 IPR001455 TusA-like domain WS_RS04815 f18c15e2961645ae011dea78d3b74632 196 SUPERFAMILY SSF75169 98 182 1.35E-8 T 11-11-2016 IPR027396 DsrEFH-like WS_RS04815 f18c15e2961645ae011dea78d3b74632 196 Gene3D G3DSA:3.40.1260.10 123 177 2.8E-8 T 11-11-2016 IPR027396 DsrEFH-like WS_RS04815 f18c15e2961645ae011dea78d3b74632 196 Pfam PF02635 DsrE/DsrF-like family 105 189 1.0E-6 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein WS_RS04815 f18c15e2961645ae011dea78d3b74632 196 Gene3D G3DSA:3.30.110.40 2 70 1.2E-15 T 11-11-2016 IPR001455 TusA-like domain WS_RS04815 f18c15e2961645ae011dea78d3b74632 196 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 2 196 2.8E-67 T 11-11-2016 IPR019870 Selenium metabolism protein YedF WS_RS03255 304bad1a8a26d6a6b31300f8f8ba628e 302 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 3 300 47.501 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 WS_RS03255 304bad1a8a26d6a6b31300f8f8ba628e 302 Pfam PF08003 Protein of unknown function (DUF1698) 16 300 2.2E-88 T 11-11-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like WS_RS03255 304bad1a8a26d6a6b31300f8f8ba628e 302 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 16 298 1.0E-97 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 WS_RS03255 304bad1a8a26d6a6b31300f8f8ba628e 302 SUPERFAMILY SSF53335 84 282 1.84E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS03255 304bad1a8a26d6a6b31300f8f8ba628e 302 Gene3D G3DSA:3.40.50.150 83 267 6.7E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06320 b2d421548dca15f51fc7f7463d58bd79 209 Pfam PF03591 AzlC protein 1 134 2.3E-39 T 11-11-2016 IPR011606 Branched-chain amino acid transport, permease WS_RS07355 7425e8ecd3e7151d10043e0ef53c4310 202 Pfam PF13489 Methyltransferase domain 28 175 9.3E-20 T 11-11-2016 WS_RS07355 7425e8ecd3e7151d10043e0ef53c4310 202 SUPERFAMILY SSF53335 3 184 4.07E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS07355 7425e8ecd3e7151d10043e0ef53c4310 202 Gene3D G3DSA:3.40.50.150 26 174 1.5E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS08565 5add121158cb62ffc5aa672440e58c1e 106 SMART SM00749 42 105 4.8E-5 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria WS_RS08565 5add121158cb62ffc5aa672440e58c1e 106 Pfam PF04972 BON domain 39 104 1.1E-19 T 11-11-2016 IPR007055 BON domain WS_RS05145 1ad930d414748ea640eaf29550cd8fbc 186 Gene3D G3DSA:2.70.40.10 3 185 1.5E-64 T 11-11-2016 IPR029054 dUTPase-like WS_RS05145 1ad930d414748ea640eaf29550cd8fbc 186 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 28.497 T 11-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 WS_RS05145 1ad930d414748ea640eaf29550cd8fbc 186 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 184 1.7E-54 T 11-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 WS_RS05145 1ad930d414748ea640eaf29550cd8fbc 186 Pfam PF00692 dUTPase 78 179 2.2E-8 T 11-11-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 WS_RS05145 1ad930d414748ea640eaf29550cd8fbc 186 SUPERFAMILY SSF51283 4 185 4.97E-50 T 11-11-2016 IPR029054 dUTPase-like WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 SUPERFAMILY SSF54862 538 599 2.58E-9 T 11-11-2016 WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 188 1.0E-10 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 Gene3D G3DSA:3.40.50.970 2 184 3.1E-51 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 Gene3D G3DSA:3.30.70.20 536 601 5.2E-12 T 11-11-2016 WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 PIRSF PIRSF006439 1 603 1.3E-247 T 11-11-2016 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 Gene3D G3DSA:3.40.50.920 240 297 3.4E-4 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 SUPERFAMILY SSF52922 238 297 2.97E-9 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 523 2.6E-22 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 Gene3D G3DSA:3.40.50.970 349 533 1.9E-21 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 SUPERFAMILY SSF52518 353 529 8.16E-30 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS03460 e1d77b10d299f6f2611458ee95c5adc8 605 SUPERFAMILY SSF52518 3 217 9.42E-53 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS08330 572da4e54bcdf27af9b138bafc1f5a81 326 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 272 17.472 T 11-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 WS_RS08330 572da4e54bcdf27af9b138bafc1f5a81 326 SUPERFAMILY SSF52402 14 216 5.12E-42 T 11-11-2016 WS_RS08330 572da4e54bcdf27af9b138bafc1f5a81 326 Gene3D G3DSA:3.40.50.620 11 171 1.9E-12 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS08330 572da4e54bcdf27af9b138bafc1f5a81 326 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 18 189 5.8E-43 T 11-11-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 WS_RS08330 572da4e54bcdf27af9b138bafc1f5a81 326 Pfam PF01171 PP-loop family 18 189 1.1E-45 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 Gene3D G3DSA:3.40.50.2300 3 127 7.6E-42 T 11-11-2016 WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 SMART SM00387 267 372 2.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 372 4.0E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 Pfam PF00072 Response regulator receiver domain 8 117 2.5E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 Gene3D G3DSA:3.30.565.10 228 372 2.0E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 7.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 355 7.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 372 7.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 337 7.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 SUPERFAMILY SSF52172 4 133 1.38E-40 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 SUPERFAMILY SSF55874 227 372 5.89E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04085 a1560adfb5244b52773be69bbcbb2a5c 372 SMART SM00448 6 117 8.9E-40 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00755 a2df3c01e8d3b0b51db0aad38330af28 129 Pfam PF02561 Flagellar protein FliS 7 120 5.1E-35 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 WS_RS00755 a2df3c01e8d3b0b51db0aad38330af28 129 Gene3D G3DSA:1.20.120.340 4 124 9.7E-37 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 WS_RS00755 a2df3c01e8d3b0b51db0aad38330af28 129 PIRSF PIRSF039090 1 128 9.4E-32 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 WS_RS00755 a2df3c01e8d3b0b51db0aad38330af28 129 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 124 5.2E-48 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 WS_RS00755 a2df3c01e8d3b0b51db0aad38330af28 129 SUPERFAMILY SSF101116 4 123 5.23E-35 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 Gene3D G3DSA:1.10.760.10 382 467 4.3E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 Pfam PF13473 Cupredoxin-like domain 169 237 1.4E-6 T 11-11-2016 IPR028096 EfeO-type cupredoxin-like domain WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 Gene3D G3DSA:2.130.10.10 2 135 1.3E-48 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 SUPERFAMILY SSF46626 374 471 1.53E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 SUPERFAMILY SSF49503 87 265 7.6E-28 T 11-11-2016 IPR008972 Cupredoxin WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 SUPERFAMILY SSF50974 2 126 9.68E-33 T 11-11-2016 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 Pfam PF00034 Cytochrome c 380 467 9.5E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04395 ef1996d667672b91336f34ac7fcf5406 475 Gene3D G3DSA:2.60.40.420 141 251 2.7E-40 T 11-11-2016 IPR008972 Cupredoxin WS_RS00805 70eabfaa856500ddd8cf6de72cce74a2 255 Gene3D G3DSA:1.10.166.10 1 66 6.0E-17 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 WS_RS00805 70eabfaa856500ddd8cf6de72cce74a2 255 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 1 65 7.3E-16 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 WS_RS00805 70eabfaa856500ddd8cf6de72cce74a2 255 Gene3D G3DSA:2.160.10.10 88 251 1.1E-39 T 11-11-2016 WS_RS00805 70eabfaa856500ddd8cf6de72cce74a2 255 SUPERFAMILY SSF51161 27 251 5.37E-48 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS00805 70eabfaa856500ddd8cf6de72cce74a2 255 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 1.9E-8 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS00805 70eabfaa856500ddd8cf6de72cce74a2 255 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 173 207 3.4E-5 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS09645 81b013dc16211edea45eb96a505289e3 232 SMART SM00448 13 124 1.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09645 81b013dc16211edea45eb96a505289e3 232 Gene3D G3DSA:3.40.50.2300 13 156 3.8E-30 T 11-11-2016 WS_RS09645 81b013dc16211edea45eb96a505289e3 232 SMART SM00862 156 226 1.8E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS09645 81b013dc16211edea45eb96a505289e3 232 SUPERFAMILY SSF46894 155 226 6.8E-11 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS09645 81b013dc16211edea45eb96a505289e3 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 226 6.5E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS09645 81b013dc16211edea45eb96a505289e3 232 Pfam PF00072 Response regulator receiver domain 15 121 1.2E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09645 81b013dc16211edea45eb96a505289e3 232 Gene3D G3DSA:1.10.10.10 157 227 4.7E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS09645 81b013dc16211edea45eb96a505289e3 232 SUPERFAMILY SSF52172 13 172 1.38E-30 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 SUPERFAMILY SSF52210 123 289 1.96E-51 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.1E-132 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 Gene3D G3DSA:3.40.50.261 120 286 3.3E-66 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 SMART SM00881 4 100 4.3E-35 T 11-11-2016 IPR003781 CoA-binding GO:0048037 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 Gene3D G3DSA:3.40.50.720 2 119 3.2E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 PIRSF PIRSF001553 1 291 9.6E-129 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-30 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-30 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-30 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-30 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 Pfam PF02629 CoA binding domain 6 99 1.0E-27 T 11-11-2016 IPR003781 CoA-binding GO:0048037 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 SUPERFAMILY SSF51735 1 122 7.6E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 Pfam PF00549 CoA-ligase 151 271 1.8E-15 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS05120 a3987d6c2bda38027f80ffb789b3b08e 294 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-11-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site WS_RS01380 8562f00dac48b0036cb8dafd39dbbd41 478 SUPERFAMILY SSF103190 70 171 7.85E-6 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS01380 8562f00dac48b0036cb8dafd39dbbd41 478 Gene3D G3DSA:3.30.450.20 144 280 1.2E-21 T 11-11-2016 WS_RS01380 8562f00dac48b0036cb8dafd39dbbd41 478 Pfam PF02743 Cache domain 63 267 1.0E-19 T 11-11-2016 IPR033479 Double Cache domain 1 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 Gene3D G3DSA:3.90.170.10 261 414 6.6E-63 T 11-11-2016 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-11-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 Gene3D G3DSA:1.10.300.10 97 190 1.1E-27 T 11-11-2016 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 Pfam PF00709 Adenylosuccinate synthetase 5 413 1.3E-170 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 SMART SM00788 3 414 8.0E-264 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 128 139 - T 11-11-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 413 1.3E-168 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 Gene3D G3DSA:3.40.440.10 1 93 2.4E-71 T 11-11-2016 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 Gene3D G3DSA:3.40.440.10 191 260 2.4E-71 T 11-11-2016 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 415 182.438 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 WS_RS09695 109f88ceb97fbc7c19af52266ee0b471 415 SUPERFAMILY SSF52540 1 414 1.7E-162 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03030 d2376d11617a2360d1fa7455339abcff 275 PIRSF PIRSF000401 10 275 5.0E-60 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 WS_RS03030 d2376d11617a2360d1fa7455339abcff 275 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 53 274 1.2E-51 T 11-11-2016 WS_RS03030 d2376d11617a2360d1fa7455339abcff 275 SUPERFAMILY SSF53335 41 270 1.33E-38 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS03030 d2376d11617a2360d1fa7455339abcff 275 Gene3D G3DSA:3.40.50.150 87 269 5.1E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS03030 d2376d11617a2360d1fa7455339abcff 275 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 274 28.687 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 WS_RS03030 d2376d11617a2360d1fa7455339abcff 275 Gene3D G3DSA:3.40.50.150 3 59 2.5E-4 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS09515 6ad0c587a6beb5bf63e44d68a0dba4d1 252 SUPERFAMILY SSF52540 3 232 6.29E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09515 6ad0c587a6beb5bf63e44d68a0dba4d1 252 Gene3D G3DSA:3.40.50.300 2 232 5.2E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09515 6ad0c587a6beb5bf63e44d68a0dba4d1 252 Pfam PF00005 ABC transporter 20 169 1.5E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS09515 6ad0c587a6beb5bf63e44d68a0dba4d1 252 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS09515 6ad0c587a6beb5bf63e44d68a0dba4d1 252 SMART SM00382 28 226 4.0E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00440 8f1d8b6d6f27e207ca4bfeb12098df58 305 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 304 2.9E-129 T 11-11-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 WS_RS00440 8f1d8b6d6f27e207ca4bfeb12098df58 305 Pfam PF01063 Amino-transferase class IV 33 264 8.6E-47 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 WS_RS00440 8f1d8b6d6f27e207ca4bfeb12098df58 305 Gene3D G3DSA:3.20.10.10 132 293 4.5E-55 T 11-11-2016 WS_RS00440 8f1d8b6d6f27e207ca4bfeb12098df58 305 SUPERFAMILY SSF56752 4 299 2.35E-96 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 WS_RS00440 8f1d8b6d6f27e207ca4bfeb12098df58 305 Gene3D G3DSA:3.30.470.10 5 128 3.9E-38 T 11-11-2016 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 SUPERFAMILY SSF47384 117 185 5.3E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 286 8.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 8.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 8.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 SMART SM00388 125 189 7.3E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 SMART SM00387 230 335 7.7E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 Gene3D G3DSA:1.10.287.130 118 185 2.9E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 SUPERFAMILY SSF55874 196 334 7.99E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 333 1.1E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 185 8.8E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS07510 4057f5bb305d94516cd0566670bb6178 335 Gene3D G3DSA:3.30.565.10 193 334 2.7E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS03935 8cd7542b222f2e0552e077a59a04a356 146 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 123 139 2.5E-10 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 WS_RS03935 8cd7542b222f2e0552e077a59a04a356 146 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 2.5E-10 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 WS_RS03935 8cd7542b222f2e0552e077a59a04a356 146 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 103 2.5E-10 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 WS_RS03935 8cd7542b222f2e0552e077a59a04a356 146 ProSitePatterns PS00855 Signal peptidases II signature. 91 103 - T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 WS_RS03935 8cd7542b222f2e0552e077a59a04a356 146 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 145 11.449 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 WS_RS03935 8cd7542b222f2e0552e077a59a04a356 146 TIGRFAM TIGR00077 lspA: signal peptidase II 11 145 3.4E-32 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 WS_RS03935 8cd7542b222f2e0552e077a59a04a356 146 Pfam PF01252 Signal peptidase (SPase) II 12 143 8.0E-21 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 WS_RS03850 43ba041cc05e49647a36b864d06c8059 333 SUPERFAMILY SSF50998 239 298 6.36E-7 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily WS_RS03850 43ba041cc05e49647a36b864d06c8059 333 SUPERFAMILY SSF50998 79 194 6.36E-7 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 Pfam PF00698 Acyl transferase domain 15 271 6.0E-20 T 11-11-2016 IPR014043 Acyl transferase WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 Gene3D G3DSA:3.30.70.250 110 179 5.2E-18 T 11-11-2016 WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 SUPERFAMILY SSF55048 111 175 2.49E-12 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 PIRSF PIRSF000446 1 290 3.0E-59 T 11-11-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 SUPERFAMILY SSF52151 1 103 1.28E-43 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 SUPERFAMILY SSF52151 172 279 1.28E-43 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 4 269 3.9E-17 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 Gene3D G3DSA:3.40.366.10 180 272 1.1E-42 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 WS_RS02590 42296cebe26fd9bee09664dcabffa3b8 295 Gene3D G3DSA:3.40.366.10 1 104 1.1E-42 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 WS_RS09775 9cc592f5354756b193a34d913bebb550 258 SUPERFAMILY SSF51556 1 254 1.24E-79 T 11-11-2016 IPR032466 Metal-dependent hydrolase WS_RS09775 9cc592f5354756b193a34d913bebb550 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 WS_RS09775 9cc592f5354756b193a34d913bebb550 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 WS_RS09775 9cc592f5354756b193a34d913bebb550 258 Gene3D G3DSA:3.20.20.140 1 254 4.5E-85 T 11-11-2016 WS_RS09775 9cc592f5354756b193a34d913bebb550 258 Pfam PF01026 TatD related DNase 2 254 1.2E-70 T 11-11-2016 IPR001130 TatD family GO:0016788 WS_RS09775 9cc592f5354756b193a34d913bebb550 258 PIRSF PIRSF005902 1 258 2.1E-78 T 11-11-2016 IPR001130 TatD family GO:0016788 WS_RS09775 9cc592f5354756b193a34d913bebb550 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 254 1.9E-80 T 11-11-2016 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 WS_RS02545 d42466ad42af96990dd722399b541274 130 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 1.2E-25 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02545 d42466ad42af96990dd722399b541274 130 Gene3D G3DSA:2.60.15.10 1 84 1.2E-25 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02545 d42466ad42af96990dd722399b541274 130 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 124 17.228 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02545 d42466ad42af96990dd722399b541274 130 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 126 2.4E-33 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02545 d42466ad42af96990dd722399b541274 130 SUPERFAMILY SSF51344 3 84 3.27E-22 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS02545 d42466ad42af96990dd722399b541274 130 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 84 2.0E-37 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 WS_RS01130 089f61cdc198132fb273e2f529ad0701 473 Gene3D G3DSA:3.50.50.60 330 405 4.0E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS01130 089f61cdc198132fb273e2f529ad0701 473 Gene3D G3DSA:3.50.50.60 57 170 4.0E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS01130 089f61cdc198132fb273e2f529ad0701 473 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 24 51 9.7E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS01130 089f61cdc198132fb273e2f529ad0701 473 SUPERFAMILY SSF51905 58 198 4.2E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS01130 089f61cdc198132fb273e2f529ad0701 473 SUPERFAMILY SSF51905 176 329 1.76E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS01130 089f61cdc198132fb273e2f529ad0701 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 58 188 5.5E-13 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS08520 282f68f7e3cef8f9a6cbbb4014d149cb 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 347 2.3E-135 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS08520 282f68f7e3cef8f9a6cbbb4014d149cb 358 SUPERFAMILY SSF53659 4 351 1.71E-125 T 11-11-2016 WS_RS08520 282f68f7e3cef8f9a6cbbb4014d149cb 358 SMART SM01329 5 349 9.8E-199 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS08520 282f68f7e3cef8f9a6cbbb4014d149cb 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 240 259 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 WS_RS08520 282f68f7e3cef8f9a6cbbb4014d149cb 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 353 50.883 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 WS_RS08520 282f68f7e3cef8f9a6cbbb4014d149cb 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 341 1.0E-155 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 WS_RS08520 282f68f7e3cef8f9a6cbbb4014d149cb 358 Gene3D G3DSA:3.40.718.10 1 350 9.5E-129 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS07130 1053d0a43995536bb356f2865cdf5285 274 Pfam PF03631 Virulence factor BrkB 22 264 1.8E-48 T 11-11-2016 IPR017039 Virulence factor BrkB WS_RS07130 1053d0a43995536bb356f2865cdf5285 274 PIRSF PIRSF035875 1 274 2.3E-48 T 11-11-2016 IPR017039 Virulence factor BrkB WS_RS07130 1053d0a43995536bb356f2865cdf5285 274 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 264 7.2E-55 T 11-11-2016 IPR017039 Virulence factor BrkB WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 PRINTS PR00474 Glutamate 5-kinase family signature 70 98 1.7E-42 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 1.7E-42 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 PRINTS PR00474 Glutamate 5-kinase family signature 38 52 1.7E-42 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 PRINTS PR00474 Glutamate 5-kinase family signature 110 131 1.7E-42 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 1.7E-42 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 Pfam PF00696 Amino acid kinase family 3 233 7.4E-44 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 Gene3D G3DSA:3.40.1160.10 1 257 9.4E-46 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 258 31.979 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 PIRSF PIRSF000729 1 260 1.6E-73 T 11-11-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 SUPERFAMILY SSF53633 2 256 1.44E-59 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 11-11-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 WS_RS02490 4582592ecc4c06df858ff73ac36f473c 261 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 237 2.8E-69 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 WS_RS04460 70608ab77ce88371805d5dbb842c1f8d 299 Pfam PF00892 EamA-like transporter family 154 291 2.8E-26 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS04460 70608ab77ce88371805d5dbb842c1f8d 299 Pfam PF00892 EamA-like transporter family 12 140 1.3E-25 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS04460 70608ab77ce88371805d5dbb842c1f8d 299 SUPERFAMILY SSF103481 42 144 3.27E-17 T 11-11-2016 WS_RS04460 70608ab77ce88371805d5dbb842c1f8d 299 SUPERFAMILY SSF103481 190 296 4.71E-16 T 11-11-2016 WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 224 2.3E-50 T 11-11-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 SMART SM00967 2 74 3.4E-12 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 SUPERFAMILY SSF55315 1 70 3.3E-12 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 Gene3D G3DSA:3.40.1280.10 81 225 3.0E-36 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 Gene3D G3DSA:3.30.1330.30 2 69 7.6E-10 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 SUPERFAMILY SSF75217 62 222 2.09E-35 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 Pfam PF00588 SpoU rRNA Methylase family 85 221 2.4E-31 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 WS_RS02185 fe51577fdefe63a9faa8d4b590072362 230 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 72 1.5E-13 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 PRINTS PR01100 Shikimate kinase family signature 80 89 2.1E-19 T 11-11-2016 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 PRINTS PR01100 Shikimate kinase family signature 61 69 2.1E-19 T 11-11-2016 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 PRINTS PR01100 Shikimate kinase family signature 33 46 2.1E-19 T 11-11-2016 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 PRINTS PR01100 Shikimate kinase family signature 9 24 2.1E-19 T 11-11-2016 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 PRINTS PR01100 Shikimate kinase family signature 97 114 2.1E-19 T 11-11-2016 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 SUPERFAMILY SSF52540 4 166 9.59E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 Hamap MF_00109 Shikimate kinase [aroK]. 6 166 21.534 T 11-11-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 Pfam PF01202 Shikimate kinase 15 164 7.6E-37 T 11-11-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 WS_RS07120 6284e2845a49309d5baf3ae97ea73cdd 166 Gene3D G3DSA:3.40.50.300 5 166 3.5E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 PIRSF PIRSF002867 1 311 7.0E-106 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 SUPERFAMILY SSF50341 15 168 4.97E-18 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 SMART SM00448 189 306 3.3E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 SUPERFAMILY SSF52172 189 310 2.99E-21 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 Gene3D G3DSA:3.40.50.2300 189 310 3.3E-23 T 11-11-2016 WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 Pfam PF01584 CheW-like domain 18 166 2.3E-24 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 Pfam PF00072 Response regulator receiver domain 191 306 1.9E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08415 ebdd2e22ae4149d19177687b799a3b11 311 SMART SM00260 14 164 2.2E-17 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 Gene3D G3DSA:3.40.1690.10 215 351 2.8E-60 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 5 350 3.6E-129 T 11-11-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 3.9E-40 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 3.9E-40 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 3.9E-40 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 3.9E-40 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 3.9E-40 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 344 1.9E-120 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 WS_RS09450 6be8ee58c66fdaeda73c12adaf2aade8 352 SUPERFAMILY SSF160544 241 348 9.81E-41 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal WS_RS04010 7e3e8f0f67a84b02b51e200ce9657c6a 346 Gene3D G3DSA:3.40.640.10 71 148 7.3E-4 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS04010 7e3e8f0f67a84b02b51e200ce9657c6a 346 Gene3D G3DSA:3.90.1150.10 227 335 8.4E-14 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS04010 7e3e8f0f67a84b02b51e200ce9657c6a 346 SUPERFAMILY SSF53383 20 335 1.06E-17 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS04160 af47c8808a61b8eb5064f868ee73d751 193 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 23 175 9.4E-44 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 WS_RS04160 af47c8808a61b8eb5064f868ee73d751 193 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 12 190 26.057 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 WS_RS04160 af47c8808a61b8eb5064f868ee73d751 193 Gene3D G3DSA:3.40.50.150 3 175 1.8E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS04160 af47c8808a61b8eb5064f868ee73d751 193 SUPERFAMILY SSF53335 4 173 5.85E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS04160 af47c8808a61b8eb5064f868ee73d751 193 PIRSF PIRSF003078 1 191 2.1E-56 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 WS_RS04160 af47c8808a61b8eb5064f868ee73d751 193 Pfam PF02527 rRNA small subunit methyltransferase G 20 175 7.3E-47 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 SUPERFAMILY SSF54675 3 105 2.04E-20 T 11-11-2016 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 104 2.5E-19 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 PIRSF PIRSF006250 1 281 1.9E-38 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 Gene3D G3DSA:3.20.20.70 132 267 4.8E-24 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 269 2.0E-20 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 Gene3D G3DSA:3.90.1170.20 3 122 7.6E-22 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 SUPERFAMILY SSF51690 106 276 5.1E-26 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 WS_RS08780 dc0cae48468f830782ba1d25cf004bf3 281 TIGRFAM TIGR01334 modD: modD protein 3 278 1.0E-56 T 11-11-2016 IPR006242 Putative pyrophosphorylase ModD GO:0016763 WS_RS04320 5adc829fbace3bdec924758a0757e694 631 Pfam PF00512 His Kinase A (phospho-acceptor) domain 420 478 2.7E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04320 5adc829fbace3bdec924758a0757e694 631 Pfam PF10442 FIST C domain 218 338 3.0E-12 T 11-11-2016 IPR019494 FIST, C-domain WS_RS04320 5adc829fbace3bdec924758a0757e694 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 527 626 7.1E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04320 5adc829fbace3bdec924758a0757e694 631 Gene3D G3DSA:3.30.565.10 486 627 3.8E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04320 5adc829fbace3bdec924758a0757e694 631 SMART SM00388 419 481 0.0077 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04320 5adc829fbace3bdec924758a0757e694 631 SUPERFAMILY SSF55874 486 621 1.26E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04320 5adc829fbace3bdec924758a0757e694 631 SUPERFAMILY SSF47384 409 478 4.51E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04320 5adc829fbace3bdec924758a0757e694 631 SMART SM00387 525 630 2.2E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04320 5adc829fbace3bdec924758a0757e694 631 SMART SM01204 216 339 3.7E-21 T 11-11-2016 IPR019494 FIST, C-domain WS_RS04320 5adc829fbace3bdec924758a0757e694 631 Pfam PF08495 FIST N domain 29 214 3.0E-29 T 11-11-2016 IPR013702 FIST domain, N-terminal WS_RS04320 5adc829fbace3bdec924758a0757e694 631 SMART SM00897 25 215 5.8E-41 T 11-11-2016 IPR013702 FIST domain, N-terminal WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 SUPERFAMILY SSF53738 3 180 9.42E-32 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.5E-21 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.5E-21 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 1.5E-21 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 1.5E-21 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 SUPERFAMILY SSF55957 361 454 3.31E-21 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 348 8.0E-16 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Gene3D G3DSA:3.40.120.10 2 141 9.6E-28 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 368 451 7.0E-12 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Gene3D G3DSA:3.40.120.10 256 347 1.6E-26 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 253 2.7E-18 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 SUPERFAMILY SSF53738 260 348 2.75E-20 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 116 8.8E-29 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Gene3D G3DSA:3.30.310.50 364 456 2.8E-27 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 Gene3D G3DSA:3.40.120.10 178 250 3.0E-24 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS09410 a7fe080ecdd58f8a07db83bb2dd1dfc2 459 SUPERFAMILY SSF53738 155 254 4.32E-23 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS06920 0634a882f9b81217de6cd0bfb420d666 328 SUPERFAMILY SSF53756 1 326 1.08E-88 T 11-11-2016 WS_RS06920 0634a882f9b81217de6cd0bfb420d666 328 Gene3D G3DSA:3.40.50.2000 155 326 1.1E-54 T 11-11-2016 WS_RS06920 0634a882f9b81217de6cd0bfb420d666 328 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 324 3.6E-58 T 11-11-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 WS_RS06920 0634a882f9b81217de6cd0bfb420d666 328 Gene3D G3DSA:3.40.50.2000 1 138 2.2E-37 T 11-11-2016 WS_RS06920 0634a882f9b81217de6cd0bfb420d666 328 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 305 1.7E-49 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 WS_RS04635 629416f4040f3b4cff693ba60ea80e06 374 SUPERFAMILY SSF56796 2 371 3.4E-97 T 11-11-2016 WS_RS04635 629416f4040f3b4cff693ba60ea80e06 374 Gene3D G3DSA:3.40.50.1970 1 185 5.5E-57 T 11-11-2016 WS_RS04635 629416f4040f3b4cff693ba60ea80e06 374 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 352 1.4E-94 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 WS_RS04635 629416f4040f3b4cff693ba60ea80e06 374 Gene3D G3DSA:1.20.1090.10 186 373 1.4E-40 T 11-11-2016 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 SUPERFAMILY SSF54686 1 137 2.09E-56 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.748 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 3.2E-60 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 Gene3D G3DSA:3.90.1170.10 23 139 2.7E-53 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.9E-49 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.0E-35 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.0E-35 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.0E-35 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.0E-35 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08050 c3f9f559838d0e1927cf425b1fa1157e 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS10240 0496c721e344caa322a263f87285073d 235 SMART SM00052 1 233 1.6E-8 T 11-11-2016 IPR001633 EAL domain WS_RS10240 0496c721e344caa322a263f87285073d 235 Pfam PF00563 EAL domain 11 227 4.9E-30 T 11-11-2016 IPR001633 EAL domain WS_RS10240 0496c721e344caa322a263f87285073d 235 SUPERFAMILY SSF141868 7 227 1.83E-39 T 11-11-2016 IPR001633 EAL domain WS_RS10240 0496c721e344caa322a263f87285073d 235 Gene3D G3DSA:3.20.20.450 7 227 3.7E-31 T 11-11-2016 IPR001633 EAL domain WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 Gene3D G3DSA:3.40.50.1270 188 388 3.7E-74 T 11-11-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PIRSF PIRSF000724 6 401 2.9E-145 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 Pfam PF00162 Phosphoglycerate kinase 14 390 4.1E-142 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 Gene3D G3DSA:3.40.50.1260 12 187 1.1E-67 T 11-11-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 SUPERFAMILY SSF53748 12 400 5.89E-144 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 144 166 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 320 345 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 40 62 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 198 217 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 353 364 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 175 197 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 18 34 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 116 131 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 PRINTS PR00477 Phosphoglycerate kinase family signature 376 393 2.1E-87 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 13 400 38.581 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS04955 3ebb444eb59cdb86f102ace56e0970db 401 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 23 33 - T 11-11-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 Pfam PF16326 ABC transporter C-terminal domain 574 641 3.4E-12 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 Pfam PF12848 ABC transporter 227 300 1.1E-6 T 11-11-2016 IPR032781 ABC-transporter extension domain WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 SUPERFAMILY SSF52540 6 239 3.06E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 Gene3D G3DSA:3.40.50.300 137 283 6.2E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 Gene3D G3DSA:3.40.50.300 5 102 6.2E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 Gene3D G3DSA:3.40.50.300 330 564 2.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 SUPERFAMILY SSF52540 319 531 1.88E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 SMART SM00382 28 235 1.5E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 SMART SM00382 356 534 9.9E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 Pfam PF00005 ABC transporter 356 481 1.6E-19 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS01225 3823c637e77e9a16d6a4072543f79add 648 Pfam PF00005 ABC transporter 19 188 1.0E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS00185 d0d86e68b91bdaba73ff250cdc7b6732 367 Gene3D G3DSA:3.40.640.10 6 247 6.9E-90 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS00185 d0d86e68b91bdaba73ff250cdc7b6732 367 SUPERFAMILY SSF53383 11 366 7.93E-93 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS00185 d0d86e68b91bdaba73ff250cdc7b6732 367 Gene3D G3DSA:3.90.1150.10 249 366 1.1E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS00185 d0d86e68b91bdaba73ff250cdc7b6732 367 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 363 5.9E-87 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS00185 d0d86e68b91bdaba73ff250cdc7b6732 367 PIRSF PIRSF000390 1 367 3.7E-92 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 SUPERFAMILY SSF51161 242 410 3.35E-32 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 Gene3D G3DSA:2.160.10.10 248 410 1.5E-31 T 11-11-2016 WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 SUPERFAMILY SSF53448 1 246 2.5E-52 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 425 34.077 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 Gene3D G3DSA:3.90.550.10 1 244 1.1E-56 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 Pfam PF12804 MobA-like NTP transferase domain 6 140 3.2E-15 T 11-11-2016 IPR025877 MobA-like NTP transferase WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 368 402 1.4E-8 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 424 3.5E-145 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 WS_RS09855 3f051a4c9fdef0c75349ddc3fc66870a 431 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 376 404 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 WS_RS01525 694b26fa96420c44acd00fa528e7abdc 390 Pfam PF00155 Aminotransferase class I and II 29 380 2.4E-75 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 WS_RS01525 694b26fa96420c44acd00fa528e7abdc 390 Gene3D G3DSA:3.90.1150.10 271 387 6.2E-46 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS01525 694b26fa96420c44acd00fa528e7abdc 390 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 11-11-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 WS_RS01525 694b26fa96420c44acd00fa528e7abdc 390 SUPERFAMILY SSF53383 2 386 2.26E-115 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS01525 694b26fa96420c44acd00fa528e7abdc 390 Gene3D G3DSA:3.40.640.10 43 270 3.1E-71 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS10780 e3f8b9cda8b47ba04eef35a4b3a51ded 560 SUPERFAMILY SSF58104 346 553 1.12E-53 T 11-11-2016 WS_RS10780 e3f8b9cda8b47ba04eef35a4b3a51ded 560 SUPERFAMILY SSF58104 241 271 1.12E-53 T 11-11-2016 WS_RS10780 e3f8b9cda8b47ba04eef35a4b3a51ded 560 SMART SM00283 343 554 1.2E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10780 e3f8b9cda8b47ba04eef35a4b3a51ded 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 394 490 4.5E-32 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10780 e3f8b9cda8b47ba04eef35a4b3a51ded 560 Gene3D G3DSA:1.10.287.950 361 550 1.4E-46 T 11-11-2016 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 SUPERFAMILY SSF51419 6 230 1.7E-40 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS03400 28ab893070923411da85fccfee25dbbb 342 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 11-11-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 Gene3D G3DSA:2.40.37.10 207 342 6.5E-25 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 PRINTS PR00992 Alanine racemase signature 142 153 9.1E-21 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 PRINTS PR00992 Alanine racemase signature 25 41 9.1E-21 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 PRINTS PR00992 Alanine racemase signature 188 215 9.1E-21 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 PRINTS PR00992 Alanine racemase signature 245 260 9.1E-21 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 PRINTS PR00992 Alanine racemase signature 109 121 9.1E-21 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 PRINTS PR00992 Alanine racemase signature 282 299 9.1E-21 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 Gene3D G3DSA:3.20.20.10 9 206 2.0E-37 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS03400 28ab893070923411da85fccfee25dbbb 342 SUPERFAMILY SSF50621 224 342 6.28E-24 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 SMART SM01005 229 342 1.5E-24 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 Pfam PF00842 Alanine racemase, C-terminal domain 229 340 2.4E-17 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 Hamap MF_01201 Alanine racemase. 1 342 19.313 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS03400 28ab893070923411da85fccfee25dbbb 342 Pfam PF01168 Alanine racemase, N-terminal domain 6 213 7.5E-39 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 PRINTS PR01035 Tetracycline resistance protein signature 98 119 2.4E-6 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 PRINTS PR01035 Tetracycline resistance protein signature 14 30 2.4E-6 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 PRINTS PR01035 Tetracycline resistance protein signature 327 350 2.4E-6 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 PRINTS PR01035 Tetracycline resistance protein signature 128 150 2.4E-6 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 PRINTS PR01035 Tetracycline resistance protein signature 242 262 2.4E-6 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 Gene3D G3DSA:1.20.1250.20 3 181 8.5E-32 T 11-11-2016 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 Gene3D G3DSA:1.20.1250.20 199 383 5.0E-26 T 11-11-2016 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 Pfam PF07690 Major Facilitator Superfamily 11 264 3.7E-37 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 WS_RS08430 327d534100c05d1f04442e7f9dc13fb3 437 SUPERFAMILY SSF103473 5 383 1.83E-64 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS00405 b07d716a3853239c29bf4d6b5d6e56a3 416 SUPERFAMILY SSF53383 5 412 1.75E-175 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS00405 b07d716a3853239c29bf4d6b5d6e56a3 416 Pfam PF00464 Serine hydroxymethyltransferase 5 379 1.1E-174 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 WS_RS00405 b07d716a3853239c29bf4d6b5d6e56a3 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 11-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 WS_RS00405 b07d716a3853239c29bf4d6b5d6e56a3 416 PIRSF PIRSF000412 1 415 7.5E-166 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 WS_RS00405 b07d716a3853239c29bf4d6b5d6e56a3 416 Gene3D G3DSA:3.90.1150.10 281 412 3.0E-53 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS00405 b07d716a3853239c29bf4d6b5d6e56a3 416 Gene3D G3DSA:3.40.640.10 34 280 7.8E-98 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS00405 b07d716a3853239c29bf4d6b5d6e56a3 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 4 412 51.183 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 Gene3D G3DSA:3.30.70.20 398 434 9.2E-17 T 11-11-2016 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 Gene3D G3DSA:3.30.70.20 159 215 2.4E-11 T 11-11-2016 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 SUPERFAMILY SSF54862 156 231 8.87E-28 T 11-11-2016 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 SUPERFAMILY SSF54862 388 510 8.87E-28 T 11-11-2016 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 Pfam PF13187 4Fe-4S dicluster domain 181 225 1.0E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 Gene3D G3DSA:1.10.1060.10 216 246 4.4E-11 T 11-11-2016 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 Gene3D G3DSA:1.10.1060.10 435 475 7.0E-7 T 11-11-2016 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 Gene3D G3DSA:1.10.1060.10 378 397 4.4E-11 T 11-11-2016 WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 Pfam PF13237 4Fe-4S dicluster domain 390 439 1.8E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05475 2c3754b1ae3bbb43fd571f8317ea091f 534 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 428 439 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS04710 e01f90a03a29bd3f381d7f40034a4b76 261 Pfam PF00005 ABC transporter 22 177 7.4E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS04710 e01f90a03a29bd3f381d7f40034a4b76 261 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS04710 e01f90a03a29bd3f381d7f40034a4b76 261 SUPERFAMILY SSF52540 3 252 1.22E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04710 e01f90a03a29bd3f381d7f40034a4b76 261 Gene3D G3DSA:3.40.50.300 2 250 9.9E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04710 e01f90a03a29bd3f381d7f40034a4b76 261 SMART SM00382 30 226 1.9E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS05345 5b4b17466fb95044209f886e6a9fec2d 274 SUPERFAMILY SSF161098 76 257 2.75E-27 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS05345 5b4b17466fb95044209f886e6a9fec2d 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 266 8.7E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS05345 5b4b17466fb95044209f886e6a9fec2d 274 Gene3D G3DSA:1.10.3720.10 79 260 4.5E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS05925 7dc604c0a35a7216ab768bd0f2d4b4ad 271 SUPERFAMILY SSF56300 1 244 2.58E-69 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS05925 7dc604c0a35a7216ab768bd0f2d4b4ad 271 PIRSF PIRSF004789 1 264 1.4E-97 T 11-11-2016 IPR005235 Metallophosphoesterase, YmdB-like WS_RS05925 7dc604c0a35a7216ab768bd0f2d4b4ad 271 Gene3D G3DSA:3.60.21.30 2 260 2.9E-93 T 11-11-2016 WS_RS05925 7dc604c0a35a7216ab768bd0f2d4b4ad 271 Pfam PF13277 YmdB-like protein 5 248 1.2E-88 T 11-11-2016 IPR005235 Metallophosphoesterase, YmdB-like WS_RS06375 70b9623ff598111057d200766b793910 633 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 570 1.1E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS06375 70b9623ff598111057d200766b793910 633 SUPERFAMILY SSF58104 311 341 6.67E-56 T 11-11-2016 WS_RS06375 70b9623ff598111057d200766b793910 633 SUPERFAMILY SSF58104 416 630 6.67E-56 T 11-11-2016 WS_RS06375 70b9623ff598111057d200766b793910 633 Pfam PF02743 Cache domain 23 244 2.8E-23 T 11-11-2016 IPR033479 Double Cache domain 1 WS_RS06375 70b9623ff598111057d200766b793910 633 Gene3D G3DSA:1.10.287.950 426 618 4.3E-46 T 11-11-2016 WS_RS06375 70b9623ff598111057d200766b793910 633 SMART SM00283 417 629 2.3E-33 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS06375 70b9623ff598111057d200766b793910 633 Gene3D G3DSA:3.30.450.20 61 159 4.0E-21 T 11-11-2016 WS_RS06375 70b9623ff598111057d200766b793910 633 SUPERFAMILY SSF103190 66 166 7.85E-10 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 Pfam PF00733 Asparagine synthase 267 575 3.8E-65 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 Pfam PF13537 Glutamine amidotransferase domain 71 189 5.0E-44 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 SUPERFAMILY SSF56235 18 237 1.89E-52 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 SUPERFAMILY SSF52402 480 598 2.65E-61 T 11-11-2016 WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 SUPERFAMILY SSF52402 245 408 2.65E-61 T 11-11-2016 WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 19 566 8.8E-133 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 Gene3D G3DSA:3.40.50.620 258 429 2.8E-63 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 Gene3D G3DSA:3.40.50.620 479 615 2.8E-63 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 Gene3D G3DSA:3.60.20.10 19 246 2.4E-59 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS10330 b6b41fa4b4f420c1aad62d47d0292f9a 623 PIRSF PIRSF001589 18 617 4.5E-125 T 11-11-2016 WS_RS03780 0aec281913b7ffa55bf3c8f64fde78f7 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 205 23.057 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 WS_RS03780 0aec281913b7ffa55bf3c8f64fde78f7 211 Gene3D G3DSA:3.20.20.70 5 206 1.0E-52 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS03780 0aec281913b7ffa55bf3c8f64fde78f7 211 SUPERFAMILY SSF51391 3 188 1.44E-49 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 WS_RS03780 0aec281913b7ffa55bf3c8f64fde78f7 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 187 3.6E-47 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 WS_RS03780 0aec281913b7ffa55bf3c8f64fde78f7 211 Pfam PF02581 Thiamine monophosphate synthase/TENI 7 184 4.3E-51 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 WS_RS09010 04e279bab59a5084056a240d28ceaf05 244 Pfam PF02348 Cytidylyltransferase 1 216 4.3E-45 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 WS_RS09010 04e279bab59a5084056a240d28ceaf05 244 Gene3D G3DSA:3.90.550.10 2 241 1.0E-62 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09010 04e279bab59a5084056a240d28ceaf05 244 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 242 33.169 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 WS_RS09010 04e279bab59a5084056a240d28ceaf05 244 SUPERFAMILY SSF53448 2 241 4.46E-49 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09010 04e279bab59a5084056a240d28ceaf05 244 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 235 3.4E-71 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 WS_RS00915 59d8a622ee2f84906f0ccef072d42b6f 227 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 224 3.8E-93 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO WS_RS00915 59d8a622ee2f84906f0ccef072d42b6f 227 SUPERFAMILY SSF46626 209 221 4.11E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00915 59d8a622ee2f84906f0ccef072d42b6f 227 SUPERFAMILY SSF46626 14 151 4.11E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00915 59d8a622ee2f84906f0ccef072d42b6f 227 Gene3D G3DSA:1.10.760.10 14 156 7.3E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00915 59d8a622ee2f84906f0ccef072d42b6f 227 Gene3D G3DSA:1.10.760.10 195 221 7.3E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00915 59d8a622ee2f84906f0ccef072d42b6f 227 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 223 1.1E-88 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 Gene3D G3DSA:3.40.50.970 5 326 8.7E-118 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 SUPERFAMILY SSF52518 7 324 7.77E-107 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 Gene3D G3DSA:3.40.50.970 329 529 1.4E-64 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 ProSitePatterns PS00802 Transketolase signature 2. 461 477 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 Pfam PF02779 Transketolase, pyrimidine binding domain 351 517 3.9E-39 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 Pfam PF02780 Transketolase, C-terminal domain 535 600 1.7E-8 T 11-11-2016 IPR033248 Transketolase, C-terminal domain WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 649 2.7E-252 T 11-11-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 SUPERFAMILY SSF52518 342 520 4.98E-58 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 SMART SM00861 352 518 3.7E-57 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 ProSitePatterns PS00801 Transketolase signature 1. 21 41 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 SUPERFAMILY SSF52922 524 650 1.09E-41 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 Gene3D G3DSA:3.40.50.920 530 648 9.1E-40 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS02750 31229745a8cd57ff01385b25600ae49b 651 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 331 1.2E-121 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 WS_RS00350 c64db84be8a1f7fc12a3dca7611960e6 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 WS_RS00350 c64db84be8a1f7fc12a3dca7611960e6 185 Gene3D G3DSA:3.40.30.10 2 184 1.8E-42 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS00350 c64db84be8a1f7fc12a3dca7611960e6 185 SUPERFAMILY SSF52833 1 181 4.59E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS00350 c64db84be8a1f7fc12a3dca7611960e6 185 Pfam PF00578 AhpC/TSA family 39 159 1.7E-14 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Hamap MF_01630 Nitrate reductase [napA]. 1 928 28.132 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 25 2.2E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 SMART SM00926 40 94 2.3E-15 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 SUPERFAMILY SSF53706 37 633 5.89E-168 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:2.20.25.90 38 95 2.3E-21 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 SUPERFAMILY SSF50692 792 928 2.49E-42 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Pfam PF00384 Molybdopterin oxidoreductase 97 617 2.1E-72 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Pfam PF01568 Molydopterin dinucleotide binding domain 814 922 3.0E-25 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 5.7E-18 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:3.40.228.10 181 296 4.9E-44 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:3.40.228.10 367 448 4.9E-44 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 63 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:2.40.40.20 797 928 1.7E-46 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:2.40.40.20 738 764 1.7E-46 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 928 0.0 T 11-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:3.40.50.740 97 180 7.5E-76 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:3.40.50.740 449 624 7.5E-76 T 11-11-2016 WS_RS05635 2c19ae468a9f138a477e2e38d0811ade 928 Gene3D G3DSA:3.40.50.740 699 737 7.5E-76 T 11-11-2016 WS_RS00725 9448fde45ae414e6312c573c96d28fcd 388 SUPERFAMILY SSF53335 122 287 6.62E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00725 9448fde45ae414e6312c573c96d28fcd 388 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 116 275 3.1E-40 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 WS_RS00725 9448fde45ae414e6312c573c96d28fcd 388 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 49 290 26.147 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 WS_RS00725 9448fde45ae414e6312c573c96d28fcd 388 Pfam PF02390 Putative methyltransferase 126 285 1.4E-39 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 WS_RS00725 9448fde45ae414e6312c573c96d28fcd 388 Gene3D G3DSA:3.40.50.150 121 232 4.4E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS04810 1f49c63a364d969eb19b14b0d39b9c68 548 SUPERFAMILY SSF52172 10 117 9.18E-5 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 Gene3D G3DSA:1.25.40.10 7 82 2.3E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 Gene3D G3DSA:1.25.40.10 83 174 8.3E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 Pfam PF13432 Tetratricopeptide repeat 39 97 7.8E-7 T 11-11-2016 WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 SUPERFAMILY SSF48452 39 201 5.31E-21 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 SMART SM00028 133 166 460.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 SMART SM00028 65 98 2.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 SMART SM00028 99 132 4.3 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS04130 bf84243e350eeebb433459cca8d7c0e6 322 SMART SM00028 31 64 0.85 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS09170 19b58b97ebc831b3655848f84141146c 562 SMART SM00283 352 558 2.8E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09170 19b58b97ebc831b3655848f84141146c 562 Gene3D G3DSA:1.10.287.950 363 553 3.3E-45 T 11-11-2016 WS_RS09170 19b58b97ebc831b3655848f84141146c 562 SUPERFAMILY SSF58104 240 270 1.92E-50 T 11-11-2016 WS_RS09170 19b58b97ebc831b3655848f84141146c 562 SUPERFAMILY SSF58104 355 558 1.92E-50 T 11-11-2016 WS_RS09170 19b58b97ebc831b3655848f84141146c 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 492 8.9E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09170 19b58b97ebc831b3655848f84141146c 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 183 4.0E-26 T 11-11-2016 IPR024478 4HB MCP domain WS_RS10455 8663ce94cbb9d83c557b8c0685d8d55b 416 Pfam PF05193 Peptidase M16 inactive domain 173 349 5.8E-29 T 11-11-2016 IPR007863 Peptidase M16, C-terminal WS_RS10455 8663ce94cbb9d83c557b8c0685d8d55b 416 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 40 63 - T 11-11-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 WS_RS10455 8663ce94cbb9d83c557b8c0685d8d55b 416 Pfam PF00675 Insulinase (Peptidase family M16) 34 134 6.3E-22 T 11-11-2016 IPR011765 Peptidase M16, N-terminal WS_RS10455 8663ce94cbb9d83c557b8c0685d8d55b 416 SUPERFAMILY SSF63411 229 414 3.83E-35 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 WS_RS10455 8663ce94cbb9d83c557b8c0685d8d55b 416 SUPERFAMILY SSF63411 5 213 1.68E-55 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 WS_RS10455 8663ce94cbb9d83c557b8c0685d8d55b 416 Gene3D G3DSA:3.30.830.10 237 410 6.5E-28 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 WS_RS10455 8663ce94cbb9d83c557b8c0685d8d55b 416 Gene3D G3DSA:3.30.830.10 6 218 6.5E-52 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 Gene3D G3DSA:3.40.50.300 58 291 1.5E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 393 45.384 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 Pfam PF06689 ClpX C4-type zinc finger 5 41 5.2E-10 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 SMART SM01086 295 382 4.4E-26 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 Gene3D G3DSA:1.10.8.60 295 390 1.5E-29 T 11-11-2016 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 389 4.6E-142 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 Pfam PF07724 AAA domain (Cdc48 subfamily) 102 288 3.8E-44 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 295 373 1.1E-13 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 SUPERFAMILY SSF57716 4 40 3.94E-6 T 11-11-2016 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 SMART SM00994 3 43 4.1E-12 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 SUPERFAMILY SSF52540 54 370 4.37E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06690 fda1fbadd6a114014105bd960247ccc9 397 SMART SM00382 102 364 2.2E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 Gene3D G3DSA:1.20.1330.10 57 182 1.5E-13 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 Gene3D G3DSA:1.20.1330.10 751 803 1.5E-13 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 SUPERFAMILY SSF64518 511 613 1.22E-14 T 11-11-2016 WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 SUPERFAMILY SSF64518 715 846 1.22E-14 T 11-11-2016 WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 SUPERFAMILY SSF64518 1 183 7.19E-33 T 11-11-2016 WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 SUPERFAMILY SSF64518 255 440 7.19E-33 T 11-11-2016 WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 SUPERFAMILY SSF64518 213 228 7.19E-33 T 11-11-2016 WS_RS02455 fed235467b133072a657c0bcde5b87f3 846 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 138 8.0E-13 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS00925 24ef6001c6735933e218162ab98155a3 285 SUPERFAMILY SSF46626 62 193 4.36E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00925 24ef6001c6735933e218162ab98155a3 285 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 43 90 4.9E-14 T 11-11-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal WS_RS00925 24ef6001c6735933e218162ab98155a3 285 PIRSF PIRSF000006 13 285 1.0E-61 T 11-11-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III WS_RS00925 24ef6001c6735933e218162ab98155a3 285 Gene3D G3DSA:1.10.760.10 67 194 9.8E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00925 24ef6001c6735933e218162ab98155a3 285 Gene3D G3DSA:1.10.760.10 200 283 2.5E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00925 24ef6001c6735933e218162ab98155a3 285 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 206 281 7.6E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00925 24ef6001c6735933e218162ab98155a3 285 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 119 191 1.6E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00925 24ef6001c6735933e218162ab98155a3 285 SUPERFAMILY SSF46626 202 283 1.03E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 Pfam PF04392 ABC transporter substrate binding protein 123 321 9.1E-9 T 11-11-2016 IPR007487 ABC transporter, substrate-binding protein WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 Gene3D G3DSA:3.20.20.450 592 842 4.5E-90 T 11-11-2016 IPR001633 EAL domain WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 SMART SM00052 589 836 5.4E-106 T 11-11-2016 IPR001633 EAL domain WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 Gene3D G3DSA:1.20.5.340 368 420 4.6E-4 T 11-11-2016 WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 Pfam PF00563 EAL domain 596 831 4.6E-66 T 11-11-2016 IPR001633 EAL domain WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 Pfam PF00990 Diguanylate cyclase, GGDEF domain 423 573 3.0E-35 T 11-11-2016 IPR000160 GGDEF domain WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 SMART SM00267 412 579 2.2E-43 T 11-11-2016 IPR000160 GGDEF domain WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 SUPERFAMILY SSF55073 428 581 1.33E-37 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 Gene3D G3DSA:3.30.70.270 424 584 7.3E-43 T 11-11-2016 WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 419 577 2.5E-29 T 11-11-2016 IPR000160 GGDEF domain WS_RS10775 af26fd1ae420d86c10ef9c562176b6c2 847 SUPERFAMILY SSF141868 594 841 1.83E-84 T 11-11-2016 IPR001633 EAL domain WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Gene3D G3DSA:2.40.40.20 577 686 1.6E-17 T 11-11-2016 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Pfam PF01568 Molydopterin dinucleotide binding domain 577 680 4.2E-12 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 SMART SM00926 4 58 2.1E-13 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 SUPERFAMILY SSF50692 577 687 5.8E-18 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Gene3D G3DSA:3.40.50.740 345 551 9.8E-65 T 11-11-2016 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Gene3D G3DSA:3.40.50.740 63 156 9.8E-65 T 11-11-2016 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 9 27 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 SUPERFAMILY SSF53706 4 560 1.96E-132 T 11-11-2016 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Gene3D G3DSA:3.40.228.10 157 344 7.7E-42 T 11-11-2016 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Pfam PF00384 Molybdopterin oxidoreductase 61 486 1.2E-42 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 55 3.8E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00590 6ac74769047f77c330ce56a139d77cde 687 Gene3D G3DSA:2.20.25.90 2 62 5.4E-18 T 11-11-2016 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 SUPERFAMILY SSF52540 7 205 7.22E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 SUPERFAMILY SSF52540 429 565 7.22E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Pfam PF00005 ABC transporter 616 852 2.4E-8 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:1.20.1580.10 255 288 9.3E-51 T 11-11-2016 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:1.20.1580.10 399 473 9.3E-51 T 11-11-2016 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:1.20.1580.10 92 130 9.3E-51 T 11-11-2016 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 ProSitePatterns PS00211 ABC transporters family signature. 822 836 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:1.10.8.280 291 398 1.1E-16 T 11-11-2016 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 SUPERFAMILY SSF52540 289 425 4.96E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 SUPERFAMILY SSF52540 12 70 4.96E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 917 0.0 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:3.40.50.300 598 659 6.8E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:3.40.50.300 813 923 6.8E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:3.40.50.300 474 591 1.2E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:3.40.50.300 3 52 1.2E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:3.30.1490.20 132 154 2.1E-15 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:3.30.1490.20 201 241 2.1E-15 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 Gene3D G3DSA:1.20.1580.10 686 812 1.4E-53 T 11-11-2016 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS07665 4cc8e66a7b0dfba906c594944a633155 937 SUPERFAMILY SSF52540 613 903 7.72E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.8E-13 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.8E-13 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.8E-13 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.8E-13 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Gene3D G3DSA:3.40.50.800 476 569 3.8E-21 T 11-11-2016 IPR004154 Anticodon-binding WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 569 37.418 T 11-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 SUPERFAMILY SSF55681 9 237 3.56E-91 T 11-11-2016 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 SUPERFAMILY SSF55681 410 480 3.56E-91 T 11-11-2016 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 1.4E-47 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.7E-20 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 SUPERFAMILY SSF55826 218 378 1.27E-18 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Pfam PF03129 Anticodon binding domain 480 569 1.0E-15 T 11-11-2016 IPR004154 Anticodon-binding WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Gene3D G3DSA:3.90.960.10 257 397 1.5E-11 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 562 1.7E-216 T 11-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 SUPERFAMILY SSF52954 466 569 1.28E-23 T 11-11-2016 IPR004154 Anticodon-binding WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Gene3D G3DSA:3.30.930.10 398 475 9.8E-98 T 11-11-2016 WS_RS07465 0d5a0a48808ea1f4da58c7d90545abc9 570 Gene3D G3DSA:3.30.930.10 10 234 9.8E-98 T 11-11-2016 WS_RS09230 ee96accf130216c84352409d520e0cc1 614 TIGRFAM TIGR00595 priA: primosomal protein N' 130 598 1.2E-152 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 WS_RS09230 ee96accf130216c84352409d520e0cc1 614 SUPERFAMILY SSF52540 305 334 1.25E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09230 ee96accf130216c84352409d520e0cc1 614 SUPERFAMILY SSF52540 394 499 1.25E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09230 ee96accf130216c84352409d520e0cc1 614 Gene3D G3DSA:3.40.50.300 308 330 5.0E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09230 ee96accf130216c84352409d520e0cc1 614 Gene3D G3DSA:3.40.50.300 394 524 5.0E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09230 ee96accf130216c84352409d520e0cc1 614 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 613 19.864 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 WS_RS09230 ee96accf130216c84352409d520e0cc1 614 Pfam PF00270 DEAD/DEAH box helicase 115 268 8.4E-10 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 WS_RS09230 ee96accf130216c84352409d520e0cc1 614 SMART SM00490 393 490 1.4E-7 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS09230 ee96accf130216c84352409d520e0cc1 614 Pfam PF00271 Helicase conserved C-terminal domain 417 489 5.9E-7 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS09230 ee96accf130216c84352409d520e0cc1 614 SMART SM00487 108 294 4.1E-19 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain WS_RS09230 ee96accf130216c84352409d520e0cc1 614 SUPERFAMILY SSF52540 83 272 1.32E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09230 ee96accf130216c84352409d520e0cc1 614 Gene3D G3DSA:3.40.50.300 112 274 1.1E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01745 6107f3e9808fd52cc8bd5a911c5321fe 347 PIRSF PIRSF004762 1 347 1.5E-107 T 11-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 WS_RS01745 6107f3e9808fd52cc8bd5a911c5321fe 347 SUPERFAMILY SSF102114 2 331 8.5E-52 T 11-11-2016 WS_RS01745 6107f3e9808fd52cc8bd5a911c5321fe 347 Gene3D G3DSA:3.20.20.70 2 331 3.1E-58 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01745 6107f3e9808fd52cc8bd5a911c5321fe 347 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 38 344 5.7E-133 T 11-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 WS_RS01745 6107f3e9808fd52cc8bd5a911c5321fe 347 Pfam PF04055 Radical SAM superfamily 45 215 1.7E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS01745 6107f3e9808fd52cc8bd5a911c5321fe 347 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 2 344 1.2E-152 T 11-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 WS_RS01745 6107f3e9808fd52cc8bd5a911c5321fe 347 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 1 347 51.798 T 11-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 SUPERFAMILY SSF52540 6 280 8.3E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 SUPERFAMILY SSF54211 479 599 2.78E-46 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 692 0.0 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 SUPERFAMILY SSF50447 264 404 7.83E-36 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Pfam PF14492 Elongation Factor G, domain II 404 478 1.2E-36 T 11-11-2016 IPR009022 Elongation factor G, III-V domain WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Gene3D G3DSA:2.40.30.10 305 405 1.3E-38 T 11-11-2016 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Pfam PF03764 Elongation factor G, domain IV 479 598 5.3E-49 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 178 8.2E-32 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 SUPERFAMILY SSF54980 603 690 2.09E-32 T 11-11-2016 IPR009022 Elongation factor G, III-V domain WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 691 112.249 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Gene3D G3DSA:3.30.70.240 599 685 1.4E-36 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Gene3D G3DSA:3.40.50.300 7 285 1.6E-105 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Gene3D G3DSA:3.30.70.870 406 480 1.8E-40 T 11-11-2016 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 9.7E-70 T 11-11-2016 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 SUPERFAMILY SSF54980 404 481 5.76E-26 T 11-11-2016 IPR009022 Elongation factor G, III-V domain WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.8E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Gene3D G3DSA:3.30.230.10 484 598 1.0E-53 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Pfam PF00679 Elongation factor G C-terminus 600 686 1.2E-33 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 SMART SM00889 480 598 1.1E-73 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 Pfam PF03144 Elongation factor Tu domain 2 324 391 7.5E-17 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 WS_RS02330 9de9b5e89360124a6d6196a9d184da40 693 SMART SM00838 600 687 4.1E-61 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 5.4E-31 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 5.4E-31 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 5.4E-31 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 5.4E-31 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 Pfam PF02355 Protein export membrane protein 112 291 7.8E-68 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 Gene3D G3DSA:1.20.1640.10 126 286 6.6E-28 T 11-11-2016 WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 SUPERFAMILY SSF82866 110 291 2.62E-35 T 11-11-2016 WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 2.5E-82 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 Pfam PF07549 SecD/SecF GG Motif 33 58 4.2E-10 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 26.659 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 WS_RS05970 7620d67d92820b50cc8aad4a5ff297ea 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 1.9E-54 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial WS_RS09265 a65fc84d278fb30ebd7033e34614816a 118 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 115 19.321 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 WS_RS09265 a65fc84d278fb30ebd7033e34614816a 118 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 115 4.2E-25 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 WS_RS09265 a65fc84d278fb30ebd7033e34614816a 118 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 115 5.1E-35 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 WS_RS09265 a65fc84d278fb30ebd7033e34614816a 118 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 111 4.3E-17 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 WS_RS09265 a65fc84d278fb30ebd7033e34614816a 118 SUPERFAMILY SSF56214 2 114 4.19E-26 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 WS_RS09265 a65fc84d278fb30ebd7033e34614816a 118 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 5 85 6.0E-41 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 WS_RS09265 a65fc84d278fb30ebd7033e34614816a 118 Gene3D G3DSA:3.90.470.20 2 115 2.9E-28 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 WS_RS06680 4aefa059e5f76ba084afab3f2c1bca08 68 SUPERFAMILY SSF159203 3 66 9.42E-16 T 11-11-2016 IPR024044 NifT/FixU barrel-like domain WS_RS06680 4aefa059e5f76ba084afab3f2c1bca08 68 Pfam PF06988 NifT/FixU protein 1 63 3.5E-18 T 11-11-2016 IPR009727 NifT/FixU GO:0009399 WS_RS06680 4aefa059e5f76ba084afab3f2c1bca08 68 Gene3D G3DSA:2.40.50.240 3 66 1.3E-19 T 11-11-2016 IPR024044 NifT/FixU barrel-like domain WS_RS06680 4aefa059e5f76ba084afab3f2c1bca08 68 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 2 66 7.0E-28 T 11-11-2016 IPR009727 NifT/FixU GO:0009399 WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 Pfam PF01145 SPFH domain / Band 7 family 27 197 1.1E-29 T 11-11-2016 IPR001107 Band 7 domain WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 PRINTS PR00721 Stomatin signature 30 52 5.1E-31 T 11-11-2016 IPR001972 Stomatin family GO:0016020 WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 PRINTS PR00721 Stomatin signature 113 130 5.1E-31 T 11-11-2016 IPR001972 Stomatin family GO:0016020 WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 PRINTS PR00721 Stomatin signature 133 156 5.1E-31 T 11-11-2016 IPR001972 Stomatin family GO:0016020 WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 PRINTS PR00721 Stomatin signature 157 175 5.1E-31 T 11-11-2016 IPR001972 Stomatin family GO:0016020 WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 PRINTS PR00721 Stomatin signature 78 99 5.1E-31 T 11-11-2016 IPR001972 Stomatin family GO:0016020 WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 PRINTS PR00721 Stomatin signature 176 197 5.1E-31 T 11-11-2016 IPR001972 Stomatin family GO:0016020 WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 SMART SM00244 23 181 6.7E-48 T 11-11-2016 IPR001107 Band 7 domain WS_RS04055 09d0acbcccf0de6e42046da8a8858d47 312 SUPERFAMILY SSF117892 54 188 7.85E-39 T 11-11-2016 IPR001107 Band 7 domain WS_RS06630 c9f93eda1804e4a00f56dada9bfd04f7 447 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 5 446 2.3E-155 T 11-11-2016 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0006461|GO:0009399 WS_RS06630 c9f93eda1804e4a00f56dada9bfd04f7 447 SUPERFAMILY SSF53807 9 442 1.18E-121 T 11-11-2016 WS_RS06630 c9f93eda1804e4a00f56dada9bfd04f7 447 Gene3D G3DSA:3.40.50.1980 37 177 3.8E-39 T 11-11-2016 WS_RS06630 c9f93eda1804e4a00f56dada9bfd04f7 447 Gene3D G3DSA:3.40.50.1980 313 447 3.4E-36 T 11-11-2016 WS_RS06630 c9f93eda1804e4a00f56dada9bfd04f7 447 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 37 432 1.3E-90 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 WS_RS06630 c9f93eda1804e4a00f56dada9bfd04f7 447 Gene3D G3DSA:3.40.50.1980 178 284 5.2E-42 T 11-11-2016 WS_RS07955 37101ce1fe748b53e5ad9b7c2bd39583 91 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 17 80 2.0E-30 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 WS_RS07955 37101ce1fe748b53e5ad9b7c2bd39583 91 Pfam PF01106 NifU-like domain 13 77 2.7E-24 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 WS_RS07955 37101ce1fe748b53e5ad9b7c2bd39583 91 SUPERFAMILY SSF117916 3 86 3.05E-24 T 11-11-2016 WS_RS02505 86673d9557a03c3fa28861b9c911e039 262 Pfam PF13614 AAA domain 3 180 5.4E-65 T 11-11-2016 IPR025669 AAA domain WS_RS02505 86673d9557a03c3fa28861b9c911e039 262 Gene3D G3DSA:3.40.50.300 4 260 1.2E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02505 86673d9557a03c3fa28861b9c911e039 262 SUPERFAMILY SSF52540 1 260 2.97E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00780 3eeb5e49942392f0ed9be5a490b11d68 154 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 22.284 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 WS_RS00780 3eeb5e49942392f0ed9be5a490b11d68 154 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 4.8E-36 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 WS_RS00780 3eeb5e49942392f0ed9be5a490b11d68 154 SUPERFAMILY SSF75217 1 152 2.15E-35 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases WS_RS00780 3eeb5e49942392f0ed9be5a490b11d68 154 PIRSF PIRSF004505 1 154 7.2E-44 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 WS_RS00780 3eeb5e49942392f0ed9be5a490b11d68 154 Gene3D G3DSA:3.40.1280.10 1 154 1.4E-36 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal WS_RS04225 1364254fc048f369f66f66d65ddb780a 151 Gene3D G3DSA:2.40.280.10 4 126 1.1E-48 T 11-11-2016 IPR023620 Small protein B WS_RS04225 1364254fc048f369f66f66d65ddb780a 151 TIGRFAM TIGR00086 smpB: SsrA-binding protein 5 149 3.5E-55 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 WS_RS04225 1364254fc048f369f66f66d65ddb780a 151 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 6 131 3.0E-68 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 WS_RS04225 1364254fc048f369f66f66d65ddb780a 151 ProSitePatterns PS01317 SsrA-binding protein. 24 36 - T 11-11-2016 IPR020081 SsrA-binding protein, conserved site WS_RS04225 1364254fc048f369f66f66d65ddb780a 151 Pfam PF01668 SmpB protein 5 68 3.5E-27 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 WS_RS04225 1364254fc048f369f66f66d65ddb780a 151 Hamap MF_00023 SsrA-binding protein [smpB]. 1 151 65.92 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 WS_RS04225 1364254fc048f369f66f66d65ddb780a 151 SUPERFAMILY SSF74982 3 131 5.49E-46 T 11-11-2016 IPR023620 Small protein B WS_RS06825 b4a1c89b767e67509ee385900a9bab7b 227 SMART SM00448 11 122 3.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06825 b4a1c89b767e67509ee385900a9bab7b 227 SUPERFAMILY SSF52172 9 176 2.28E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS06825 b4a1c89b767e67509ee385900a9bab7b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 225 1.2E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS06825 b4a1c89b767e67509ee385900a9bab7b 227 Gene3D G3DSA:1.10.10.10 136 226 7.3E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS06825 b4a1c89b767e67509ee385900a9bab7b 227 Gene3D G3DSA:3.40.50.2300 8 131 1.0E-30 T 11-11-2016 WS_RS06825 b4a1c89b767e67509ee385900a9bab7b 227 Pfam PF00072 Response regulator receiver domain 14 122 9.6E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06825 b4a1c89b767e67509ee385900a9bab7b 227 SMART SM00862 155 225 3.1E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 Gene3D G3DSA:3.40.50.720 2 246 7.6E-83 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 SUPERFAMILY SSF51735 5 247 2.54E-80 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.8E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.8E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.8E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.8E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.8E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.8E-41 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 6.2E-4 T 11-11-2016 WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 7.3E-95 T 11-11-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 2.6E-62 T 11-11-2016 WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.7E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.7E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS03080 9e8cfa87273058ba6f7ba1c97863b7e9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.7E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS04380 6a4f497fa26ece6fb55a647864c8514d 197 Pfam PF00027 Cyclic nucleotide-binding domain 12 99 6.7E-17 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS04380 6a4f497fa26ece6fb55a647864c8514d 197 Gene3D G3DSA:1.10.10.10 151 196 3.2E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04380 6a4f497fa26ece6fb55a647864c8514d 197 Gene3D G3DSA:2.60.120.10 3 118 6.1E-26 T 11-11-2016 IPR014710 RmlC-like jelly roll fold WS_RS04380 6a4f497fa26ece6fb55a647864c8514d 197 SUPERFAMILY SSF51206 3 120 6.68E-27 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like WS_RS04380 6a4f497fa26ece6fb55a647864c8514d 197 SUPERFAMILY SSF46785 133 196 4.54E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04380 6a4f497fa26ece6fb55a647864c8514d 197 Pfam PF13545 Crp-like helix-turn-helix domain 151 196 2.6E-9 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 WS_RS04380 6a4f497fa26ece6fb55a647864c8514d 197 SMART SM00100 1 114 2.5E-9 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain WS_RS07220 a5a343cc37fce5952ddfa6cf7009b977 420 SUPERFAMILY SSF55874 264 396 2.6E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS07220 a5a343cc37fce5952ddfa6cf7009b977 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 305 398 2.1E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS07220 a5a343cc37fce5952ddfa6cf7009b977 420 SUPERFAMILY SSF47384 189 250 1.55E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS07220 a5a343cc37fce5952ddfa6cf7009b977 420 SMART SM00387 303 405 2.3E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS07220 a5a343cc37fce5952ddfa6cf7009b977 420 Gene3D G3DSA:3.30.565.10 265 396 2.7E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS07220 a5a343cc37fce5952ddfa6cf7009b977 420 Gene3D G3DSA:1.10.287.130 198 252 4.9E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04370 451531a83346d29d29226c416934842a 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 147 8.2E-26 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS04370 451531a83346d29d29226c416934842a 704 SUPERFAMILY SSF56935 251 704 1.43E-111 T 11-11-2016 WS_RS04370 451531a83346d29d29226c416934842a 704 SUPERFAMILY SSF56935 23 214 1.43E-111 T 11-11-2016 WS_RS04370 451531a83346d29d29226c416934842a 704 Gene3D G3DSA:2.170.130.10 17 150 2.6E-38 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS04370 451531a83346d29d29226c416934842a 704 Gene3D G3DSA:2.40.170.20 151 702 3.0E-80 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS04370 451531a83346d29d29226c416934842a 704 Pfam PF00593 TonB dependent receptor 458 702 1.4E-20 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS01360 ff0fdb8c4e191453408500ac0e656569 246 SUPERFAMILY SSF52540 5 239 1.3E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01360 ff0fdb8c4e191453408500ac0e656569 246 Gene3D G3DSA:3.40.50.300 4 241 3.9E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01360 ff0fdb8c4e191453408500ac0e656569 246 Pfam PF00005 ABC transporter 21 169 2.6E-38 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS01360 ff0fdb8c4e191453408500ac0e656569 246 PIRSF PIRSF039085 2 245 2.1E-109 T 11-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 WS_RS01360 ff0fdb8c4e191453408500ac0e656569 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS01360 ff0fdb8c4e191453408500ac0e656569 246 SMART SM00382 30 217 1.9E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00240 196e0b9697025dffad87ceeaee9200ff 364 SUPERFAMILY SSF53756 3 352 2.65E-72 T 11-11-2016 WS_RS00240 196e0b9697025dffad87ceeaee9200ff 364 Gene3D G3DSA:3.40.50.2000 177 330 1.6E-22 T 11-11-2016 WS_RS00240 196e0b9697025dffad87ceeaee9200ff 364 Gene3D G3DSA:3.40.50.2000 61 128 5.1E-6 T 11-11-2016 WS_RS00240 196e0b9697025dffad87ceeaee9200ff 364 Pfam PF00534 Glycosyl transferases group 1 176 332 9.8E-38 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 WS_RS00240 196e0b9697025dffad87ceeaee9200ff 364 Pfam PF13439 Glycosyltransferase Family 4 13 168 1.2E-11 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Gene3D G3DSA:3.40.50.2300 808 930 4.1E-32 T 11-11-2016 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SMART SM00065 395 546 1.2E-14 T 11-11-2016 IPR003018 GAF domain GO:0005515 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SUPERFAMILY SSF55874 613 786 2.62E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 672 785 4.8E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Pfam PF13426 PAS domain 20 110 0.057 T 11-11-2016 IPR000014 PAS domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Pfam PF00512 His Kinase A (phospho-acceptor) domain 558 624 4.4E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SMART SM00448 808 920 1.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Pfam PF01590 GAF domain 400 536 1.1E-11 T 11-11-2016 IPR003018 GAF domain GO:0005515 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SUPERFAMILY SSF52172 809 932 1.57E-29 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SMART SM00388 558 624 1.6E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SMART SM00387 671 787 3.5E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SMART SM00086 325 366 8.0 T 11-11-2016 IPR001610 PAC motif WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SMART SM00086 197 239 5.7 T 11-11-2016 IPR001610 PAC motif WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SUPERFAMILY SSF55785 11 111 2.79E-5 T 11-11-2016 IPR000014 PAS domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Pfam PF00989 PAS fold 121 232 2.0E-5 T 11-11-2016 IPR013767 PAS fold GO:0006355 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 765 9.2E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 712 726 9.2E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 784 9.2E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 PRINTS PR00344 Bacterial sensor protein C-terminal signature 730 740 9.2E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Gene3D G3DSA:3.30.450.20 229 378 3.3E-14 T 11-11-2016 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 113 242 1.2E-10 T 11-11-2016 IPR000014 PAS domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 328 371 3.2E-6 T 11-11-2016 IPR000014 PAS domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Gene3D G3DSA:3.30.450.40 379 547 1.5E-20 T 11-11-2016 IPR029016 GAF domain-like WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SUPERFAMILY SSF55785 123 241 6.28E-12 T 11-11-2016 IPR000014 PAS domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Gene3D G3DSA:3.30.450.20 112 228 3.9E-13 T 11-11-2016 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Gene3D G3DSA:3.30.565.10 610 786 3.0E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SUPERFAMILY SSF55781 378 538 7.2E-22 T 11-11-2016 IPR029016 GAF domain-like WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 SUPERFAMILY SSF47384 547 626 4.71E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Pfam PF00072 Response regulator receiver domain 810 920 6.1E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04695 14353d930b315bca2de186d68294a9a0 1019 Gene3D G3DSA:1.10.287.130 552 609 1.3E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 SMART SM00028 9 42 16.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 SMART SM00028 243 276 450.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 SMART SM00028 209 242 0.37 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 SMART SM00028 175 208 43.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 SMART SM00028 110 143 0.0012 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 SMART SM00028 76 109 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 Pfam PF13432 Tetratricopeptide repeat 14 74 6.2E-5 T 11-11-2016 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 Pfam PF13432 Tetratricopeptide repeat 225 268 0.0058 T 11-11-2016 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 Pfam PF13432 Tetratricopeptide repeat 114 170 1.9E-5 T 11-11-2016 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 SUPERFAMILY SSF48452 15 253 5.31E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS07150 f7a7c2769ee68b029eab3621d8cabd0b 529 Gene3D G3DSA:1.25.40.10 10 272 7.7E-38 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 9.7E-13 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 9.7E-13 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 9.7E-13 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 443 42.324 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Gene3D G3DSA:3.40.120.10 178 251 2.6E-23 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 133 3.4E-45 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 SUPERFAMILY SSF53738 2 181 5.89E-46 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Gene3D G3DSA:3.30.310.50 369 439 3.0E-7 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 366 4.7E-28 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 SUPERFAMILY SSF53738 259 364 5.89E-27 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 7.0E-20 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Gene3D G3DSA:3.40.120.10 2 141 4.6E-46 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 399 435 1.3E-5 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 SUPERFAMILY SSF55957 362 445 4.97E-13 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 Gene3D G3DSA:3.40.120.10 252 366 1.5E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 SUPERFAMILY SSF53738 156 258 5.49E-27 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS03930 2dfa7bc5733462d38d7f5902df126f05 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 438 8.7E-159 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 WS_RS00990 ae0eeea7e23c8f3a43f251ffaf280ff3 152 Pfam PF00578 AhpC/TSA family 3 128 9.6E-38 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS00990 ae0eeea7e23c8f3a43f251ffaf280ff3 152 SUPERFAMILY SSF52833 3 150 2.02E-47 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS00990 ae0eeea7e23c8f3a43f251ffaf280ff3 152 PIRSF PIRSF000239 2 152 1.0E-25 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS00990 ae0eeea7e23c8f3a43f251ffaf280ff3 152 Gene3D G3DSA:3.40.30.10 3 150 4.6E-50 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS04520 f04a7110f9b6b55bd2da02d31f4fab91 395 SUPERFAMILY SSF103473 4 381 7.46E-36 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS04520 f04a7110f9b6b55bd2da02d31f4fab91 395 Gene3D G3DSA:1.20.1250.20 4 181 6.7E-20 T 11-11-2016 WS_RS04520 f04a7110f9b6b55bd2da02d31f4fab91 395 Pfam PF07690 Major Facilitator Superfamily 5 342 7.9E-26 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 WS_RS04520 f04a7110f9b6b55bd2da02d31f4fab91 395 Gene3D G3DSA:1.20.1250.20 201 280 6.2E-4 T 11-11-2016 WS_RS04520 f04a7110f9b6b55bd2da02d31f4fab91 395 Gene3D G3DSA:1.20.1250.20 281 373 4.0E-7 T 11-11-2016 WS_RS04105 0ddaf0d7dfa40c5b793867c323e15c9b 131 Pfam PF06339 Ectoine synthase 2 128 4.2E-55 T 11-11-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS04105 0ddaf0d7dfa40c5b793867c323e15c9b 131 Hamap MF_01255 L-ectoine synthase [ectC]. 1 129 40.101 T 11-11-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS04105 0ddaf0d7dfa40c5b793867c323e15c9b 131 Gene3D G3DSA:2.60.120.10 19 113 5.8E-15 T 11-11-2016 IPR014710 RmlC-like jelly roll fold WS_RS04105 0ddaf0d7dfa40c5b793867c323e15c9b 131 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 119 3.0E-65 T 11-11-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS04105 0ddaf0d7dfa40c5b793867c323e15c9b 131 SUPERFAMILY SSF51182 18 128 7.92E-22 T 11-11-2016 IPR011051 RmlC-like cupin domain WS_RS07450 1a1ee0a877f5237181317ca0d8e2ccf1 386 SUPERFAMILY SSF56935 194 385 8.11E-12 T 11-11-2016 WS_RS07450 1a1ee0a877f5237181317ca0d8e2ccf1 386 SUPERFAMILY SSF56935 35 156 8.11E-12 T 11-11-2016 WS_RS07450 1a1ee0a877f5237181317ca0d8e2ccf1 386 Gene3D G3DSA:2.40.160.10 98 386 1.8E-13 T 11-11-2016 IPR023614 Porin domain WS_RS07450 1a1ee0a877f5237181317ca0d8e2ccf1 386 Pfam PF13609 Gram-negative porin 8 370 1.0E-11 T 11-11-2016 WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 SUPERFAMILY SSF52540 314 333 2.68E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 SUPERFAMILY SSF52540 194 263 2.68E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 SUPERFAMILY SSF52540 477 735 2.68E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 Pfam PF13087 AAA domain 570 734 2.2E-25 T 11-11-2016 WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 Gene3D G3DSA:3.40.50.300 320 346 5.0E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 Gene3D G3DSA:3.40.50.300 173 279 5.0E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 Gene3D G3DSA:3.40.50.300 507 602 5.0E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 Pfam PF10881 Protein of unknown function (DUF2726) 805 925 1.8E-9 T 11-11-2016 IPR024402 Domain of unknown function DUF2726 WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 Pfam PF13086 AAA domain 197 547 9.6E-26 T 11-11-2016 WS_RS05300 df26ddc7f92cefdce39cb5c8c4641c13 934 Gene3D G3DSA:3.40.50.300 603 751 1.8E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 260 327 1.0E-33 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 Pfam PF01106 NifU-like domain 254 324 2.8E-18 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 SUPERFAMILY SSF82649 14 157 1.6E-35 T 11-11-2016 WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 Pfam PF01592 NifU-like N terminal domain 14 148 2.8E-45 T 11-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 Gene3D G3DSA:3.90.1010.10 14 149 1.0E-33 T 11-11-2016 WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 PIRSF PIRSF000375 12 327 2.0E-116 T 11-11-2016 IPR016217 Nitrogen fixation, NifU WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 SUPERFAMILY SSF117916 244 327 2.18E-18 T 11-11-2016 WS_RS10390 363ab774abe34ed064c9a541c646e07b 327 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 200 1.1E-10 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 6.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 6.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 6.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 6.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 Pfam PF00557 Metallopeptidase family M24 15 241 1.1E-42 T 11-11-2016 IPR000994 Peptidase M24, structural domain WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 SUPERFAMILY SSF55920 3 251 4.71E-72 T 11-11-2016 IPR000994 Peptidase M24, structural domain WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 Gene3D G3DSA:3.90.230.10 3 251 1.5E-73 T 11-11-2016 IPR000994 Peptidase M24, structural domain WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 35.448 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 WS_RS07990 c30ae6ed919904ffe247f8f6250c76da 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 251 4.5E-90 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 WS_RS00435 13a36b3a5985401f7de40069683a1200 381 PRINTS PR00679 Prohibitin signature 208 224 9.2E-15 T 11-11-2016 IPR000163 Prohibitin GO:0016020 WS_RS00435 13a36b3a5985401f7de40069683a1200 381 PRINTS PR00679 Prohibitin signature 259 282 9.2E-15 T 11-11-2016 IPR000163 Prohibitin GO:0016020 WS_RS00435 13a36b3a5985401f7de40069683a1200 381 PRINTS PR00679 Prohibitin signature 282 298 9.2E-15 T 11-11-2016 IPR000163 Prohibitin GO:0016020 WS_RS00435 13a36b3a5985401f7de40069683a1200 381 PRINTS PR00679 Prohibitin signature 185 203 9.2E-15 T 11-11-2016 IPR000163 Prohibitin GO:0016020 WS_RS00435 13a36b3a5985401f7de40069683a1200 381 Pfam PF01145 SPFH domain / Band 7 family 85 284 1.1E-32 T 11-11-2016 IPR001107 Band 7 domain WS_RS00435 13a36b3a5985401f7de40069683a1200 381 SUPERFAMILY SSF117892 113 271 3.01E-12 T 11-11-2016 IPR001107 Band 7 domain WS_RS00435 13a36b3a5985401f7de40069683a1200 381 SMART SM00244 81 264 1.5E-21 T 11-11-2016 IPR001107 Band 7 domain WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 377 34.663 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 Gene3D G3DSA:3.40.50.1440 15 220 2.0E-80 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 SMART SM00864 15 208 1.3E-97 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 11-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 PRINTS PR00423 Cell division protein FtsZ signature 129 150 2.6E-39 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 PRINTS PR00423 Cell division protein FtsZ signature 217 238 2.6E-39 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 PRINTS PR00423 Cell division protein FtsZ signature 101 121 2.6E-39 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 PRINTS PR00423 Cell division protein FtsZ signature 192 214 2.6E-39 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 SMART SM00865 212 331 1.2E-48 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 335 1.7E-114 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 SUPERFAMILY SSF55307 211 327 7.78E-39 T 11-11-2016 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 Pfam PF12327 FtsZ family, C-terminal domain 227 323 8.3E-22 T 11-11-2016 IPR024757 Cell division protein FtsZ, C-terminal WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 Gene3D G3DSA:3.30.1330.20 221 325 1.3E-39 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 176 9.0E-37 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS01150 eb32cc5cc03545762867686b7dcc77bb 385 SUPERFAMILY SSF52490 14 208 1.02E-58 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 SUPERFAMILY SSF54862 1 202 9.63E-65 T 11-11-2016 WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 167 8.1E-77 T 11-11-2016 IPR014297 Dimethylsulphoxide reductase, chain B WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 Pfam PF13247 4Fe-4S dicluster domain 63 157 1.3E-22 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 Pfam PF12800 4Fe-4S binding domain 13 28 0.057 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 Gene3D G3DSA:3.30.70.20 123 174 4.9E-13 T 11-11-2016 WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 Gene3D G3DSA:3.30.70.20 83 122 4.4E-24 T 11-11-2016 WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS06810 1101c5588b7de6701f30b42d5801ed01 217 Gene3D G3DSA:3.30.70.20 5 82 6.9E-14 T 11-11-2016 WS_RS10045 c26c8e6a3100f9577c685ded85f378ad 315 Gene3D G3DSA:3.40.50.970 11 312 1.8E-81 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS10045 c26c8e6a3100f9577c685ded85f378ad 315 SUPERFAMILY SSF52518 16 311 1.08E-73 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS10045 c26c8e6a3100f9577c685ded85f378ad 315 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 219 9.7E-28 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 WS_RS05165 897a6b354a22d770f11494c52b0673ac 376 Gene3D G3DSA:3.40.640.10 2 241 4.7E-79 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS05165 897a6b354a22d770f11494c52b0673ac 376 Gene3D G3DSA:3.90.1150.10 243 367 3.4E-26 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS05165 897a6b354a22d770f11494c52b0673ac 376 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 2 365 5.7E-155 T 11-11-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase WS_RS05165 897a6b354a22d770f11494c52b0673ac 376 PIRSF PIRSF000390 1 369 9.5E-110 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS05165 897a6b354a22d770f11494c52b0673ac 376 SUPERFAMILY SSF53383 2 366 4.87E-107 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS05165 897a6b354a22d770f11494c52b0673ac 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 361 7.2E-112 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS07615 21840f8177cc39151da8f5ae931e0762 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 5 88 10.611 T 11-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 WS_RS07615 21840f8177cc39151da8f5ae931e0762 96 SUPERFAMILY SSF143430 7 71 2.22E-13 T 11-11-2016 WS_RS07615 21840f8177cc39151da8f5ae931e0762 96 Pfam PF09827 CRISPR associated protein Cas2 7 67 6.2E-10 T 11-11-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 WS_RS07615 21840f8177cc39151da8f5ae931e0762 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 7 49 1.9E-6 T 11-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 WS_RS07615 21840f8177cc39151da8f5ae931e0762 96 Gene3D G3DSA:3.30.70.240 7 68 7.2E-15 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain WS_RS06970 cc35163b99909e8923d4e7f2cbf16839 67 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 6.3E-28 T 11-11-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 WS_RS06970 cc35163b99909e8923d4e7f2cbf16839 67 Pfam PF01361 Tautomerase enzyme 2 61 2.2E-23 T 11-11-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 WS_RS06970 cc35163b99909e8923d4e7f2cbf16839 67 SUPERFAMILY SSF55331 2 64 2.54E-22 T 11-11-2016 IPR014347 Tautomerase/MIF superfamily WS_RS06970 cc35163b99909e8923d4e7f2cbf16839 67 Gene3D G3DSA:3.30.429.20 1 60 5.0E-28 T 11-11-2016 WS_RS06750 f58475f5b8103d8615b0e57a5275be65 463 Gene3D G3DSA:1.20.1600.10 51 461 7.1E-96 T 11-11-2016 WS_RS06750 f58475f5b8103d8615b0e57a5275be65 463 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 458 4.9E-93 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 WS_RS06750 f58475f5b8103d8615b0e57a5275be65 463 SUPERFAMILY SSF56954 4 460 4.71E-97 T 11-11-2016 WS_RS06750 f58475f5b8103d8615b0e57a5275be65 463 Pfam PF02321 Outer membrane efflux protein 279 456 6.4E-24 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS06750 f58475f5b8103d8615b0e57a5275be65 463 Pfam PF02321 Outer membrane efflux protein 62 249 3.8E-33 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 SMART SM00382 144 322 2.0E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 Gene3D G3DSA:2.40.10.170 2 76 1.1E-27 T 11-11-2016 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 74 8.6E-19 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 SUPERFAMILY SSF52540 79 350 2.85E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 Gene3D G3DSA:1.10.1140.10 348 465 3.7E-57 T 11-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 55.109 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 SUPERFAMILY SSF50615 2 76 6.8E-22 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 Gene3D G3DSA:3.40.50.300 79 347 3.2E-110 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 463 7.9E-258 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 SUPERFAMILY SSF47917 348 463 6.28E-53 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02540 c7c6f22a72ca89220ba4afb3d4e6355d 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 9.4E-66 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS02830 7f8e90c5fcd544d2d08455b6f5bb88ab 223 Pfam PF01292 Prokaryotic cytochrome b561 5 194 2.5E-24 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 WS_RS02830 7f8e90c5fcd544d2d08455b6f5bb88ab 223 Gene3D G3DSA:1.20.950.20 2 220 1.4E-42 T 11-11-2016 WS_RS02830 7f8e90c5fcd544d2d08455b6f5bb88ab 223 SUPERFAMILY SSF81342 3 215 6.59E-32 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 WS_RS02830 7f8e90c5fcd544d2d08455b6f5bb88ab 223 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 11 28 - T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS00385 6123db13f8b8ff1c317a9366f5809ffd 414 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 65 414 4.5E-55 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 WS_RS00385 6123db13f8b8ff1c317a9366f5809ffd 414 Pfam PF00795 Carbon-nitrogen hydrolase 222 388 6.9E-5 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS00385 6123db13f8b8ff1c317a9366f5809ffd 414 SUPERFAMILY SSF56317 216 414 7.19E-21 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS00385 6123db13f8b8ff1c317a9366f5809ffd 414 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 18 414 12.507 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 WS_RS00385 6123db13f8b8ff1c317a9366f5809ffd 414 Gene3D G3DSA:3.60.110.10 221 404 1.2E-11 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 Gene3D G3DSA:4.10.640.10 9 75 1.2E-26 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 ProSitePatterns PS00057 Ribosomal protein S18 signature. 22 45 - T 11-11-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 2.5E-13 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 2.5E-13 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 2.5E-13 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 2.5E-13 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 74 18.628 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 TIGRFAM TIGR00165 S18: ribosomal protein bS18 7 72 3.2E-35 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 Pfam PF01084 Ribosomal protein S18 18 69 1.6E-22 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 2.0E-24 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08785 2efd0d356725f4c98205404a17ed39bd 85 SUPERFAMILY SSF46911 5 74 2.35E-23 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03285 2f5704fb22634e7b523c586838e6cee6 267 Gene3D G3DSA:3.30.70.660 120 253 1.8E-32 T 11-11-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS03285 2f5704fb22634e7b523c586838e6cee6 267 Pfam PF01416 tRNA pseudouridine synthase 155 256 4.2E-19 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS03285 2f5704fb22634e7b523c586838e6cee6 267 Gene3D G3DSA:3.30.70.580 15 119 1.2E-18 T 11-11-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS03285 2f5704fb22634e7b523c586838e6cee6 267 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 16 255 29.871 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS03285 2f5704fb22634e7b523c586838e6cee6 267 PIRSF PIRSF001430 15 267 2.8E-74 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS03285 2f5704fb22634e7b523c586838e6cee6 267 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 19 248 1.5E-47 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS03285 2f5704fb22634e7b523c586838e6cee6 267 SUPERFAMILY SSF55120 14 261 1.73E-59 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS02130 e1cc40b302b26ad47abdb7e98ecf3d6a 162 Pfam PF01230 HIT domain 34 125 3.4E-14 T 11-11-2016 IPR001310 Histidine triad (HIT) protein WS_RS02130 e1cc40b302b26ad47abdb7e98ecf3d6a 162 SUPERFAMILY SSF54197 1 160 5.57E-38 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 WS_RS02130 e1cc40b302b26ad47abdb7e98ecf3d6a 162 Gene3D G3DSA:3.30.428.10 20 138 8.7E-31 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 Gene3D G3DSA:1.10.10.60 221 276 1.4E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 318 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 SUPERFAMILY SSF46689 276 326 4.48E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 SMART SM00342 240 322 2.6E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 306 1.3E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 322 1.3E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 Gene3D G3DSA:1.10.10.60 277 324 1.7E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 SUPERFAMILY SSF46689 224 274 2.69E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01410 90332d1951249e1f8adfe4227135e8d9 328 Pfam PF12833 Helix-turn-helix domain 247 323 3.5E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 155 162 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 PIRSF PIRSF000349 1 195 9.1E-74 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 SUPERFAMILY SSF54719 85 191 1.7E-41 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 187 2.3E-36 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 SUPERFAMILY SSF46609 1 81 1.83E-27 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 Gene3D G3DSA:1.10.287.990 19 80 8.8E-22 T 11-11-2016 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 80 3.3E-24 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 PRINTS PR01703 Manganese superoxide dismutase signature 26 39 4.8E-16 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 PRINTS PR01703 Manganese superoxide dismutase signature 64 77 4.8E-16 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 PRINTS PR01703 Manganese superoxide dismutase signature 116 124 4.8E-16 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS07490 61c2e0c12c73b7c060cb8b33665ea6f4 209 PRINTS PR01703 Manganese superoxide dismutase signature 153 165 4.8E-16 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 WS_RS10725 e222ad51141b49394281ce57f05138cd 501 SUPERFAMILY SSF103190 54 185 9.42E-7 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS10725 e222ad51141b49394281ce57f05138cd 501 Pfam PF00990 Diguanylate cyclase, GGDEF domain 344 496 2.1E-45 T 11-11-2016 IPR000160 GGDEF domain WS_RS10725 e222ad51141b49394281ce57f05138cd 501 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 339 499 2.9E-48 T 11-11-2016 IPR000160 GGDEF domain WS_RS10725 e222ad51141b49394281ce57f05138cd 501 Pfam PF14827 Double sensory domain of two-component sensor kinase 42 288 2.2E-63 T 11-11-2016 IPR029150 Double Cache domain 3 WS_RS10725 e222ad51141b49394281ce57f05138cd 501 Gene3D G3DSA:3.30.70.270 345 499 5.9E-53 T 11-11-2016 WS_RS10725 e222ad51141b49394281ce57f05138cd 501 SUPERFAMILY SSF55073 348 499 3.14E-47 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10725 e222ad51141b49394281ce57f05138cd 501 SMART SM00267 332 500 3.1E-63 T 11-11-2016 IPR000160 GGDEF domain WS_RS09810 326473fd60c5f1db29ba259e4e85f6ee 328 Gene3D G3DSA:3.20.20.70 2 327 4.7E-89 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS09810 326473fd60c5f1db29ba259e4e85f6ee 328 Hamap MF_00493 Transaldolase [tal]. 1 328 93.732 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS09810 326473fd60c5f1db29ba259e4e85f6ee 328 SUPERFAMILY SSF51569 5 327 1.34E-68 T 11-11-2016 WS_RS09810 326473fd60c5f1db29ba259e4e85f6ee 328 TIGRFAM TIGR00876 tal_mycobact: transaldolase 7 325 6.5E-81 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS09810 326473fd60c5f1db29ba259e4e85f6ee 328 PIRSF PIRSF036915 1 328 5.0E-73 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS09810 326473fd60c5f1db29ba259e4e85f6ee 328 ProSitePatterns PS01054 Transaldolase signature 1. 35 43 - T 11-11-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 WS_RS09810 326473fd60c5f1db29ba259e4e85f6ee 328 Pfam PF00923 Transaldolase 10 326 5.0E-82 T 11-11-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 WS_RS09470 540608ccd6d66c0417505bd05de12d44 298 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 1 274 43.764 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS09470 540608ccd6d66c0417505bd05de12d44 298 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 3.8E-102 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS09470 540608ccd6d66c0417505bd05de12d44 298 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 292 4.8E-121 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS09470 540608ccd6d66c0417505bd05de12d44 298 SUPERFAMILY SSF54211 131 272 3.79E-48 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS09470 540608ccd6d66c0417505bd05de12d44 298 SUPERFAMILY SSF54211 1 122 3.22E-39 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS09470 540608ccd6d66c0417505bd05de12d44 298 Gene3D G3DSA:3.30.1700.10 126 277 2.6E-57 T 11-11-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS09470 540608ccd6d66c0417505bd05de12d44 298 Gene3D G3DSA:3.30.230.20 1 122 1.5E-40 T 11-11-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 WS_RS03335 801b11f1c30638e66c2135235ef429e6 172 SUPERFAMILY SSF51197 3 167 8.79E-31 T 11-11-2016 WS_RS03335 801b11f1c30638e66c2135235ef429e6 172 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 52 167 7.8E-21 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family WS_RS03335 801b11f1c30638e66c2135235ef429e6 172 Pfam PF04074 Domain of unknown function (DUF386) 3 164 1.4E-26 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family WS_RS03335 801b11f1c30638e66c2135235ef429e6 172 Gene3D G3DSA:2.60.120.370 3 167 1.6E-38 T 11-11-2016 IPR004375 YhcH/YjgK/YiaL family WS_RS00745 e3236c212c347f0cdd61e1238b82f2b4 118 Gene3D G3DSA:3.30.160.170 24 114 2.8E-21 T 11-11-2016 IPR005186 FlaG protein WS_RS00745 e3236c212c347f0cdd61e1238b82f2b4 118 Pfam PF03646 FlaG protein 23 116 2.4E-22 T 11-11-2016 IPR005186 FlaG protein WS_RS00745 e3236c212c347f0cdd61e1238b82f2b4 118 SUPERFAMILY SSF160214 21 117 1.83E-23 T 11-11-2016 IPR005186 FlaG protein WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 Pfam PF13183 4Fe-4S dicluster domain 147 218 2.4E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 228 3.9E-51 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 SUPERFAMILY SSF46548 107 235 3.14E-23 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 110 9.4E-24 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 SUPERFAMILY SSF54292 2 105 3.23E-19 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 Gene3D G3DSA:3.10.20.30 2 105 7.2E-24 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 WS_RS09030 d663c67566725cb0e8e91601f58732e2 319 Gene3D G3DSA:1.10.1060.10 106 235 3.6E-22 T 11-11-2016 WS_RS07040 5d5cf217b86e240976f5badb8f85e9dd 278 Gene3D G3DSA:2.30.30.60 125 173 5.6E-16 T 11-11-2016 WS_RS07040 5d5cf217b86e240976f5badb8f85e9dd 278 Pfam PF05552 Conserved TM helix 11 57 6.2E-11 T 11-11-2016 IPR008910 Conserved TM helix WS_RS07040 5d5cf217b86e240976f5badb8f85e9dd 278 SUPERFAMILY SSF82861 24 107 7.72E-15 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 WS_RS07040 5d5cf217b86e240976f5badb8f85e9dd 278 Pfam PF00924 Mechanosensitive ion channel 67 263 2.9E-51 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 WS_RS07040 5d5cf217b86e240976f5badb8f85e9dd 278 SUPERFAMILY SSF82689 175 272 4.45E-27 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 WS_RS07040 5d5cf217b86e240976f5badb8f85e9dd 278 SUPERFAMILY SSF50182 108 174 1.96E-16 T 11-11-2016 IPR010920 LSM domain WS_RS07040 5d5cf217b86e240976f5badb8f85e9dd 278 Gene3D G3DSA:3.30.70.100 176 261 9.9E-27 T 11-11-2016 WS_RS05995 535d7970329ca94e56a42f148d345126 293 Pfam PF00226 DnaJ domain 5 65 2.1E-26 T 11-11-2016 IPR001623 DnaJ domain WS_RS05995 535d7970329ca94e56a42f148d345126 293 SUPERFAMILY SSF46565 3 115 1.22E-30 T 11-11-2016 IPR001623 DnaJ domain WS_RS05995 535d7970329ca94e56a42f148d345126 293 Gene3D G3DSA:2.60.260.20 201 274 1.8E-16 T 11-11-2016 WS_RS05995 535d7970329ca94e56a42f148d345126 293 Gene3D G3DSA:2.60.260.20 131 195 3.5E-11 T 11-11-2016 WS_RS05995 535d7970329ca94e56a42f148d345126 293 SUPERFAMILY SSF49493 129 197 1.31E-12 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 WS_RS05995 535d7970329ca94e56a42f148d345126 293 PRINTS PR00625 DnaJ domain signature 6 24 5.9E-27 T 11-11-2016 IPR001623 DnaJ domain WS_RS05995 535d7970329ca94e56a42f148d345126 293 PRINTS PR00625 DnaJ domain signature 60 79 5.9E-27 T 11-11-2016 IPR001623 DnaJ domain WS_RS05995 535d7970329ca94e56a42f148d345126 293 PRINTS PR00625 DnaJ domain signature 24 39 5.9E-27 T 11-11-2016 IPR001623 DnaJ domain WS_RS05995 535d7970329ca94e56a42f148d345126 293 PRINTS PR00625 DnaJ domain signature 40 60 5.9E-27 T 11-11-2016 IPR001623 DnaJ domain WS_RS05995 535d7970329ca94e56a42f148d345126 293 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 11-11-2016 IPR018253 DnaJ domain, conserved site WS_RS05995 535d7970329ca94e56a42f148d345126 293 Pfam PF01556 DnaJ C terminal domain 134 274 5.1E-32 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal WS_RS05995 535d7970329ca94e56a42f148d345126 293 Gene3D G3DSA:1.10.287.110 2 87 4.4E-33 T 11-11-2016 IPR001623 DnaJ domain WS_RS05995 535d7970329ca94e56a42f148d345126 293 SUPERFAMILY SSF49493 201 278 1.31E-16 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 WS_RS05995 535d7970329ca94e56a42f148d345126 293 SMART SM00271 3 60 1.0E-28 T 11-11-2016 IPR001623 DnaJ domain WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 590 8.0E-52 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 Gene3D G3DSA:1.10.287.950 361 566 1.5E-53 T 11-11-2016 WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 SUPERFAMILY SSF58104 349 594 5.75E-59 T 11-11-2016 WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 3.5E-41 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 397 3.5E-41 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 3.5E-41 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 472 3.5E-41 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS00450 55d0b29fa3cd2af932d102737e7d481c 664 SMART SM00283 347 594 7.4E-70 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS06300 31cf61050dc9e099bed3c1729c000880 255 SUPERFAMILY SSF52540 3 216 1.2E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06300 31cf61050dc9e099bed3c1729c000880 255 SMART SM00382 30 214 3.7E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06300 31cf61050dc9e099bed3c1729c000880 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS06300 31cf61050dc9e099bed3c1729c000880 255 Pfam PF00005 ABC transporter 22 167 2.7E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS06300 31cf61050dc9e099bed3c1729c000880 255 Gene3D G3DSA:3.40.50.300 4 218 1.9E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 Gene3D G3DSA:3.40.1440.10 16 102 2.9E-10 T 11-11-2016 IPR027299 GIY-YIG domain WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 SUPERFAMILY SSF46600 203 241 4.32E-9 T 11-11-2016 IPR001943 UVR domain GO:0005515 WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 SUPERFAMILY SSF82771 16 106 1.12E-19 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 383 537 4.1E-39 T 11-11-2016 IPR001162 UvrC family homology region WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 SUPERFAMILY SSF47781 520 599 8.26E-15 T 11-11-2016 IPR010994 RuvA domain 2-like WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 Pfam PF01541 GIY-YIG catalytic domain 17 99 6.5E-9 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 Gene3D G3DSA:4.10.860.10 185 241 3.7E-13 T 11-11-2016 IPR001943 UVR domain GO:0005515 WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 SMART SM00465 16 104 2.0E-20 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 600 25.577 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 584 2.5E-173 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 Pfam PF02151 UvrB/uvrC motif 207 240 3.3E-9 T 11-11-2016 IPR001943 UVR domain GO:0005515 WS_RS07580 9decd19a020c06e45b8d34f1b3385bad 602 Gene3D G3DSA:1.10.150.20 552 600 4.2E-10 T 11-11-2016 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 SUPERFAMILY SSF53244 293 438 4.21E-24 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 Gene3D G3DSA:3.90.190.20 296 437 1.4E-28 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 SUPERFAMILY SSF51984 6 91 2.88E-24 T 11-11-2016 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 SUPERFAMILY SSF53623 90 292 3.21E-35 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 6 433 1.7E-115 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 379 2.4E-16 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 Gene3D G3DSA:3.40.1190.10 93 295 2.1E-35 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 Gene3D G3DSA:3.40.50.720 6 91 3.9E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 Pfam PF08245 Mur ligase middle domain 109 218 1.3E-6 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS07065 f66165b85b38a8798cc7a4d9d435b4f1 439 Pfam PF01225 Mur ligase family, catalytic domain 6 103 1.7E-21 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 WS_RS03445 8ba8eccf801780a50628ed78acd2f370 145 Gene3D G3DSA:3.30.70.260 7 52 8.8E-9 T 11-11-2016 WS_RS03445 8ba8eccf801780a50628ed78acd2f370 145 SUPERFAMILY SSF55021 6 68 4.37E-12 T 11-11-2016 WS_RS03445 8ba8eccf801780a50628ed78acd2f370 145 SUPERFAMILY SSF55021 73 140 6.41E-9 T 11-11-2016 WS_RS04345 86663583912674c155e84e0e7b2dd842 404 Pfam PF05940 NnrS protein 19 398 3.4E-63 T 11-11-2016 IPR010266 NnrS WS_RS06400 be6201c0e9e62f4288fb209ed05a8118 375 SUPERFAMILY SSF47384 143 210 4.32E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06400 be6201c0e9e62f4288fb209ed05a8118 375 Gene3D G3DSA:1.10.287.130 145 210 2.1E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06400 be6201c0e9e62f4288fb209ed05a8118 375 SUPERFAMILY SSF52172 7 129 3.7E-31 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS06400 be6201c0e9e62f4288fb209ed05a8118 375 Gene3D G3DSA:3.40.50.2300 7 123 4.5E-28 T 11-11-2016 WS_RS06400 be6201c0e9e62f4288fb209ed05a8118 375 Pfam PF00072 Response regulator receiver domain 9 118 1.9E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06400 be6201c0e9e62f4288fb209ed05a8118 375 SMART SM00388 146 217 0.0075 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06400 be6201c0e9e62f4288fb209ed05a8118 375 SMART SM00448 7 118 7.1E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 SMART SM00271 208 274 5.3E-11 T 11-11-2016 IPR001623 DnaJ domain WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 Pfam PF00226 DnaJ domain 215 275 4.5E-10 T 11-11-2016 IPR001623 DnaJ domain WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 SUPERFAMILY SSF158682 59 193 1.11E-16 T 11-11-2016 IPR029024 TerB-like WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 SUPERFAMILY SSF46565 202 275 6.58E-14 T 11-11-2016 IPR001623 DnaJ domain WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 Gene3D G3DSA:1.10.3680.10 65 195 2.7E-17 T 11-11-2016 IPR029024 TerB-like WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 Gene3D G3DSA:1.10.287.110 209 275 7.2E-13 T 11-11-2016 IPR001623 DnaJ domain WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 PRINTS PR00625 DnaJ domain signature 230 245 1.2E-5 T 11-11-2016 IPR001623 DnaJ domain WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 PRINTS PR00625 DnaJ domain signature 254 274 1.2E-5 T 11-11-2016 IPR001623 DnaJ domain WS_RS05785 e62d4a5269cdad1d917ca561038c0dcd 278 Pfam PF05099 Tellurite resistance protein TerB 71 188 2.6E-17 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal WS_RS00410 c8544d921a2bd9953dfaef0b77fd0f7b 181 SUPERFAMILY SSF56747 4 179 3.4E-91 T 11-11-2016 WS_RS00410 c8544d921a2bd9953dfaef0b77fd0f7b 181 Pfam PF08966 Domain of unknown function (DUF1882) 3 74 3.2E-37 T 11-11-2016 IPR015061 Domain of unknown function DUF1882 WS_RS00410 c8544d921a2bd9953dfaef0b77fd0f7b 181 Gene3D G3DSA:3.90.920.20 3 181 5.9E-94 T 11-11-2016 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 SUPERFAMILY SSF82866 249 269 7.98E-45 T 11-11-2016 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 SUPERFAMILY SSF82866 312 509 7.98E-45 T 11-11-2016 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 265 495 2.8E-82 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 PRINTS PR00702 Acriflavin resistance protein family signature 351 374 3.5E-7 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 3.5E-7 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 PRINTS PR00702 Acriflavin resistance protein family signature 404 428 3.5E-7 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 514 42.016 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 Pfam PF02355 Protein export membrane protein 335 502 9.1E-16 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 38 499 2.5E-145 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 WS_RS05975 655b0584cb23990d3a8f4499bb57358f 525 Gene3D G3DSA:1.20.1640.10 319 514 2.8E-27 T 11-11-2016 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Gene3D G3DSA:3.30.230.70 3 247 8.7E-69 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Gene3D G3DSA:3.30.230.70 343 571 1.2E-76 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 731 26.894 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Pfam PF00013 KH domain 585 641 2.6E-8 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SUPERFAMILY SSF54791 583 679 2.63E-14 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Pfam PF00575 S1 RNA binding domain 660 722 5.3E-15 T 11-11-2016 IPR003029 S1 domain GO:0003676 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Gene3D G3DSA:1.10.10.400 265 342 1.1E-16 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SMART SM00322 579 645 1.0E-6 T 11-11-2016 IPR004087 K Homology domain GO:0003676 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Gene3D G3DSA:3.30.1370.10 580 651 1.0E-16 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Pfam PF01138 3' exoribonuclease family, domain 1 13 139 1.5E-19 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Pfam PF01138 3' exoribonuclease family, domain 1 351 483 3.3E-19 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Gene3D G3DSA:2.40.50.140 655 725 8.6E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SMART SM00316 659 728 2.8E-17 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 PIRSF PIRSF005499 1 731 6.5E-259 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SUPERFAMILY SSF55666 142 255 6.66E-16 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Pfam PF03725 3' exoribonuclease family, domain 2 487 557 1.7E-5 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Pfam PF03725 3' exoribonuclease family, domain 2 143 236 1.6E-9 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SUPERFAMILY SSF54211 3 139 8.1E-41 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SUPERFAMILY SSF50249 655 725 5.82E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SUPERFAMILY SSF54211 318 515 8.6E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 270 347 4.6E-6 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 WS_RS04295 d6470d2bedbe37df5d1dc2ee658fc74e 732 SUPERFAMILY SSF55666 478 571 1.18E-23 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 213 2.5E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 Gene3D G3DSA:3.40.50.2300 2 118 2.1E-31 T 11-11-2016 WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 Gene3D G3DSA:1.10.10.10 129 214 5.8E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 SMART SM00448 1 112 1.2E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 SUPERFAMILY SSF52172 2 163 4.7E-32 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 SUPERFAMILY SSF46894 143 214 5.61E-11 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 Pfam PF00072 Response regulator receiver domain 3 112 3.1E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08450 2036951ab3b5d2b073f3475408ebb100 215 SMART SM00862 144 214 2.3E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS10185 5ea1c1fc025d7ed10716814669610168 81 SMART SM00363 1 60 3.6E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS10185 5ea1c1fc025d7ed10716814669610168 81 SUPERFAMILY SSF55174 1 77 3.79E-18 T 11-11-2016 WS_RS10185 5ea1c1fc025d7ed10716814669610168 81 Gene3D G3DSA:3.10.290.10 1 77 5.1E-20 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS10185 5ea1c1fc025d7ed10716814669610168 81 PIRSF PIRSF038881 1 81 2.2E-24 T 11-11-2016 IPR025490 RNA-binding protein, HP1423 type WS_RS10185 5ea1c1fc025d7ed10716814669610168 81 Pfam PF01479 S4 domain 1 47 4.1E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS07590 da28498b6cfbfb6b34edccaa178a7e34 664 Pfam PF00593 TonB dependent receptor 425 648 8.7E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS07590 da28498b6cfbfb6b34edccaa178a7e34 664 SUPERFAMILY SSF56935 20 664 7.63E-121 T 11-11-2016 WS_RS07590 da28498b6cfbfb6b34edccaa178a7e34 664 Gene3D G3DSA:2.40.170.20 160 664 1.1E-84 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS07590 da28498b6cfbfb6b34edccaa178a7e34 664 Gene3D G3DSA:2.170.130.10 22 159 9.3E-34 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS07590 da28498b6cfbfb6b34edccaa178a7e34 664 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 150 9.6E-18 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS07590 da28498b6cfbfb6b34edccaa178a7e34 664 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 647 664 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site WS_RS10385 10389fb6dabe3b9d8e74bc11d7ab6bc7 333 Pfam PF03601 Conserved hypothetical protein 698 11 313 4.1E-80 T 11-11-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 WS_RS10625 f6fb4893c94be4a47a16c710cc5ff973 234 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 233 2.9E-17 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 WS_RS10625 f6fb4893c94be4a47a16c710cc5ff973 234 Gene3D G3DSA:3.30.1150.10 143 231 3.4E-13 T 11-11-2016 WS_RS10625 f6fb4893c94be4a47a16c710cc5ff973 234 PRINTS PR01374 Gram-negative bacterial tonB protein signature 154 175 1.2E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 WS_RS10625 f6fb4893c94be4a47a16c710cc5ff973 234 PRINTS PR01374 Gram-negative bacterial tonB protein signature 175 193 1.2E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 WS_RS10625 f6fb4893c94be4a47a16c710cc5ff973 234 PRINTS PR01374 Gram-negative bacterial tonB protein signature 87 97 1.2E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 WS_RS10625 f6fb4893c94be4a47a16c710cc5ff973 234 SUPERFAMILY SSF74653 135 232 4.32E-15 T 11-11-2016 WS_RS10625 f6fb4893c94be4a47a16c710cc5ff973 234 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 161 233 1.6E-15 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 SUPERFAMILY SSF50475 1 318 2.28E-103 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 SUPERFAMILY SSF143968 319 447 4.97E-39 T 11-11-2016 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 6 418 2.1E-129 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 447 6.5E-137 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 Gene3D G3DSA:3.40.1670.10 333 447 2.2E-29 T 11-11-2016 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 Gene3D G3DSA:3.40.1670.10 468 580 1.5E-17 T 11-11-2016 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 4 441 1.3E-201 T 11-11-2016 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 WS_RS07285 fc66714ccdf34e35ac02a825af99a6ea 612 SUPERFAMILY SSF143968 457 590 9.81E-9 T 11-11-2016 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 Gene3D G3DSA:3.30.70.260 450 521 6.2E-19 T 11-11-2016 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 284 7.8E-59 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 SUPERFAMILY SSF143548 327 451 3.14E-32 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 316 2.5E-31 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 Gene3D G3DSA:3.30.1330.90 325 449 1.3E-40 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 SUPERFAMILY SSF55021 445 523 9.16E-14 T 11-11-2016 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 528 5.3E-195 T 11-11-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 Gene3D G3DSA:3.40.50.720 120 285 1.4E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 Pfam PF01842 ACT domain 457 517 1.9E-7 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 SUPERFAMILY SSF51735 100 285 4.8E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 Gene3D G3DSA:3.40.50.720 3 119 4.2E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06285 f1171f44e71d1402a57bad4bbe6e5cf7 528 SUPERFAMILY SSF52283 13 124 5.1E-32 T 11-11-2016 WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 SUPERFAMILY SSF52821 285 367 9.69E-14 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 Gene3D G3DSA:3.40.250.10 153 255 9.0E-19 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 SMART SM00450 153 252 1.7E-7 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 SMART SM00450 47 151 1.5E-11 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 SMART SM00450 287 388 1.3E-4 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 Pfam PF00581 Rhodanese-like domain 290 376 2.4E-6 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 Pfam PF00581 Rhodanese-like domain 155 249 5.8E-10 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 Pfam PF00581 Rhodanese-like domain 56 147 2.5E-12 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 SUPERFAMILY SSF52821 37 150 7.27E-18 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 Gene3D G3DSA:3.40.250.10 35 151 8.5E-17 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 SUPERFAMILY SSF52821 152 256 7.2E-22 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03055 0a2929f189a96528e2946c12b5d5e5d5 389 Gene3D G3DSA:3.40.250.10 285 367 4.9E-12 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS01545 b5bee2189046b8135beadf85306dcf67 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.094 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 WS_RS01545 b5bee2189046b8135beadf85306dcf67 186 Gene3D G3DSA:1.10.132.20 67 186 1.5E-41 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 WS_RS01545 b5bee2189046b8135beadf85306dcf67 186 SUPERFAMILY SSF55194 4 185 6.41E-67 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 WS_RS01545 b5bee2189046b8135beadf85306dcf67 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 6.0E-72 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 WS_RS01545 b5bee2189046b8135beadf85306dcf67 186 Pfam PF01765 Ribosome recycling factor 21 184 2.7E-61 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 WS_RS00230 38a591122baa2e8c8833b49e9e91285c 258 Gene3D G3DSA:3.20.20.370 57 169 4.9E-9 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 WS_RS00230 38a591122baa2e8c8833b49e9e91285c 258 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 4 197 5.9E-46 T 11-11-2016 IPR018763 Protein of unknown function DUF2334 WS_RS00230 38a591122baa2e8c8833b49e9e91285c 258 SUPERFAMILY SSF88713 21 163 1.89E-14 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 WS_RS09820 faada3c1610b2862653eddf07f478066 162 Pfam PF01584 CheW-like domain 26 160 3.5E-36 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09820 faada3c1610b2862653eddf07f478066 162 SUPERFAMILY SSF50341 23 160 1.26E-37 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS09820 faada3c1610b2862653eddf07f478066 162 Gene3D G3DSA:2.30.30.40 99 152 6.6E-9 T 11-11-2016 WS_RS09820 faada3c1610b2862653eddf07f478066 162 Gene3D G3DSA:2.40.50.180 65 98 1.9E-11 T 11-11-2016 WS_RS09820 faada3c1610b2862653eddf07f478066 162 SMART SM00260 22 158 5.9E-43 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.3E-49 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.3E-49 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.3E-49 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.3E-49 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.3E-49 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 156 6.0E-85 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 PIRSF PIRSF006160 1 162 5.5E-67 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 Gene3D G3DSA:3.30.1360.80 1 161 1.8E-69 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.092 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 7.4E-60 T 11-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 WS_RS10035 d1901c5dd4c57eeed16857f3f757a32a 163 SUPERFAMILY SSF63411 4 161 6.32E-65 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 WS_RS02600 86430a9f690b93c8e0ff593293167479 159 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 78 4.1E-9 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 WS_RS02600 86430a9f690b93c8e0ff593293167479 159 Gene3D G3DSA:3.40.50.1240 1 146 1.8E-29 T 11-11-2016 IPR029033 Histidine phosphatase superfamily WS_RS02600 86430a9f690b93c8e0ff593293167479 159 SUPERFAMILY SSF53254 3 151 2.23E-18 T 11-11-2016 IPR029033 Histidine phosphatase superfamily WS_RS02600 86430a9f690b93c8e0ff593293167479 159 SMART SM00855 3 118 1.5E-5 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Gene3D G3DSA:1.10.8.60 343 427 1.4E-33 T 11-11-2016 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 333 1.8E-15 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 SUPERFAMILY SSF52540 549 846 4.57E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 SUPERFAMILY SSF81923 5 155 1.18E-27 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 760 5.0E-55 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Gene3D G3DSA:3.40.50.300 159 340 4.7E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Gene3D G3DSA:3.40.50.300 553 778 6.5E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 SMART SM01086 766 855 3.6E-33 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 SMART SM00382 600 768 1.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 SMART SM00382 198 343 5.2E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Gene3D G3DSA:1.10.1780.10 4 147 1.6E-27 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 845 1.6E-24 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 6.0E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 6.0E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 6.0E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 6.0E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Gene3D G3DSA:1.10.8.60 779 855 4.4E-28 T 11-11-2016 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 98 145 0.0014 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 68 1.1E-5 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 WS_RS02975 82829a6ac4e30b74e5a7d4d3aeb25ae2 857 SUPERFAMILY SSF52540 160 547 4.18E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04430 6ce06c340a3f3afebb7f11585b5a1a49 212 Gene3D G3DSA:3.40.50.300 2 209 4.4E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04430 6ce06c340a3f3afebb7f11585b5a1a49 212 Pfam PF00005 ABC transporter 17 158 1.4E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS04430 6ce06c340a3f3afebb7f11585b5a1a49 212 SUPERFAMILY SSF52540 2 208 3.52E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04430 6ce06c340a3f3afebb7f11585b5a1a49 212 SMART SM00382 26 205 8.1E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS04430 6ce06c340a3f3afebb7f11585b5a1a49 212 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 Pfam PF13426 PAS domain 157 258 5.1E-17 T 11-11-2016 IPR000014 PAS domain WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 Gene3D G3DSA:3.40.50.2300 15 144 2.7E-34 T 11-11-2016 WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 Gene3D G3DSA:3.30.450.20 156 258 2.4E-29 T 11-11-2016 WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 Gene3D G3DSA:3.30.450.20 278 318 9.7E-4 T 11-11-2016 WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 SUPERFAMILY SSF55785 154 256 1.52E-29 T 11-11-2016 IPR000014 PAS domain WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 SMART SM00086 217 259 3.6E-8 T 11-11-2016 IPR001610 PAC motif WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 Pfam PF00072 Response regulator receiver domain 16 125 5.2E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 265 4.3E-20 T 11-11-2016 IPR000014 PAS domain WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 SUPERFAMILY SSF52172 14 141 2.42E-36 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 SMART SM00091 143 212 5.7E-4 T 11-11-2016 IPR000014 PAS domain WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 SMART SM00091 284 348 6.3 T 11-11-2016 IPR000014 PAS domain WS_RS10650 dd2e707a2c9fdefd4f62f416887e301c 407 SMART SM00448 14 125 1.2E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10375 534fca7af901b4e4b2e0cbefedb3a746 244 SUPERFAMILY SSF160387 61 174 4.97E-27 T 11-11-2016 WS_RS10375 534fca7af901b4e4b2e0cbefedb3a746 244 Pfam PF05573 NosL 40 153 7.7E-18 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 11-11-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 319 2.3E-143 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 Gene3D G3DSA:3.20.20.70 2 322 1.8E-144 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 SUPERFAMILY SSF51569 2 321 4.52E-136 T 11-11-2016 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 SMART SM01004 1 321 8.8E-227 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 2.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 2.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 2.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 2.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 2.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 2.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS08560 0b8107561a2c294b685f96671ef87f05 323 PIRSF PIRSF001415 1 323 3.9E-142 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS09505 0d987709d06c5080938b30e2e8ab1bdf 191 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 184 5.8E-8 T 11-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component WS_RS09505 0d987709d06c5080938b30e2e8ab1bdf 191 Gene3D G3DSA:3.40.50.10610 22 184 2.9E-22 T 11-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component WS_RS09505 0d987709d06c5080938b30e2e8ab1bdf 191 SUPERFAMILY SSF159594 28 186 2.07E-20 T 11-11-2016 WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 209 215 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 SUPERFAMILY SSF53335 71 363 4.0E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 136 150 6.6E-7 T 11-11-2016 WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 240 264 6.6E-7 T 11-11-2016 WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 206 218 6.6E-7 T 11-11-2016 WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 112 128 6.6E-7 T 11-11-2016 WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 Gene3D G3DSA:3.40.50.150 114 333 3.6E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 Pfam PF02384 N-6 DNA Methylase 114 366 4.1E-36 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 WS_RS06880 9cc69e86a7d10f7162ef625c21787878 560 SUPERFAMILY SSF116734 412 557 3.11E-6 T 11-11-2016 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 5 290 1.5E-128 T 11-11-2016 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 5 288 4.6E-125 T 11-11-2016 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 PRINTS PR00091 Nitrogenase component II signature 100 114 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 PRINTS PR00091 Nitrogenase component II signature 33 48 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 PRINTS PR00091 Nitrogenase component II signature 10 23 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 PRINTS PR00091 Nitrogenase component II signature 139 154 3.5E-37 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 SUPERFAMILY SSF52540 5 293 3.66E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 PIRSF PIRSF000363 3 291 1.0E-112 T 11-11-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 Hamap MF_00533 Nitrogenase iron protein [nifH]. 4 290 48.242 T 11-11-2016 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 ProSitePatterns PS00746 NifH/frxC family signature 1. 102 114 - T 11-11-2016 IPR030655 NifH/chlL conserved site WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 Gene3D G3DSA:3.40.50.300 6 286 4.2E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06650 4b552310f4a437b6b887d9f2949910ed 303 ProSitePatterns PS00692 NifH/frxC family signature 2. 140 153 - T 11-11-2016 IPR030655 NifH/chlL conserved site WS_RS05350 ed7cac4a42908eb80cb0395050e6f912 245 SMART SM00382 28 218 5.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS05350 ed7cac4a42908eb80cb0395050e6f912 245 SUPERFAMILY SSF52540 3 216 7.53E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05350 ed7cac4a42908eb80cb0395050e6f912 245 Pfam PF00005 ABC transporter 19 168 1.2E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS05350 ed7cac4a42908eb80cb0395050e6f912 245 Gene3D G3DSA:3.40.50.300 3 216 1.0E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05350 ed7cac4a42908eb80cb0395050e6f912 245 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS01095 d10d2343a9c7a2816e2c43c8cc6dea0b 213 PIRSF PIRSF001461 1 213 9.4E-90 T 11-11-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS01095 d10d2343a9c7a2816e2c43c8cc6dea0b 213 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS01095 d10d2343a9c7a2816e2c43c8cc6dea0b 213 SUPERFAMILY SSF51366 1 212 1.77E-66 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 WS_RS01095 d10d2343a9c7a2816e2c43c8cc6dea0b 213 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 1.2E-79 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS01095 d10d2343a9c7a2816e2c43c8cc6dea0b 213 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 212 4.4E-87 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS01095 d10d2343a9c7a2816e2c43c8cc6dea0b 213 Gene3D G3DSA:3.20.20.70 2 212 5.5E-84 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01095 d10d2343a9c7a2816e2c43c8cc6dea0b 213 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 WS_RS08060 4cff84707d4d05227bb6563b8796732c 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 24.217 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08060 4cff84707d4d05227bb6563b8796732c 109 SUPERFAMILY SSF54843 3 105 2.35E-34 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 WS_RS08060 4cff84707d4d05227bb6563b8796732c 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 78 102 - T 11-11-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08060 4cff84707d4d05227bb6563b8796732c 109 Pfam PF00237 Ribosomal protein L22p/L17e 7 101 2.3E-26 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 WS_RS08060 4cff84707d4d05227bb6563b8796732c 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 1.6E-37 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08060 4cff84707d4d05227bb6563b8796732c 109 Gene3D G3DSA:3.90.470.10 2 106 4.6E-33 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 WS_RS01985 66b4367b6e8f175c0d791fd820b9fa87 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 16 386 1.7E-111 T 11-11-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 WS_RS01985 66b4367b6e8f175c0d791fd820b9fa87 389 Gene3D G3DSA:3.90.1150.10 255 388 2.0E-30 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS01985 66b4367b6e8f175c0d791fd820b9fa87 389 SUPERFAMILY SSF53383 15 389 1.61E-86 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS01985 66b4367b6e8f175c0d791fd820b9fa87 389 Gene3D G3DSA:3.40.640.10 50 254 5.2E-49 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS01985 66b4367b6e8f175c0d791fd820b9fa87 389 Pfam PF00155 Aminotransferase class I and II 58 382 4.7E-38 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 38.522 T 11-11-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 Gene3D G3DSA:1.20.58.410 4 115 3.1E-22 T 11-11-2016 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 Pfam PF00472 RF-1 domain 228 335 2.6E-41 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 361 6.8E-164 T 11-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 Gene3D G3DSA:3.30.160.20 226 305 8.5E-38 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 SUPERFAMILY SSF75620 29 362 1.83E-128 T 11-11-2016 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 SMART SM00937 84 194 6.9E-53 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 WS_RS00525 ee05a56dacabbade3f4715b06b8ad5c6 368 Pfam PF03462 PCRF domain 30 219 4.2E-59 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 WS_RS01405 11b8a4d790d6002ef6b4b978758465d0 266 Pfam PF04454 Encapsulating protein for peroxidase 1 252 4.3E-75 T 11-11-2016 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 WS_RS01405 11b8a4d790d6002ef6b4b978758465d0 266 PIRSF PIRSF019254 1 266 9.7E-93 T 11-11-2016 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 WS_RS08495 fe8e3e27c38dd6cc97fd49ee6f67d7e4 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 2.8E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS08495 fe8e3e27c38dd6cc97fd49ee6f67d7e4 222 SUPERFAMILY SSF161098 5 217 3.4E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS08495 fe8e3e27c38dd6cc97fd49ee6f67d7e4 222 Gene3D G3DSA:1.10.3720.10 8 220 2.6E-37 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS10255 e1a703a3e4240f5a66d202990d0fb683 359 SUPERFAMILY SSF102114 18 348 5.36E-46 T 11-11-2016 WS_RS10255 e1a703a3e4240f5a66d202990d0fb683 359 PIRSF PIRSF004762 1 359 1.4E-105 T 11-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 WS_RS10255 e1a703a3e4240f5a66d202990d0fb683 359 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 6 358 49.722 T 11-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 WS_RS10255 e1a703a3e4240f5a66d202990d0fb683 359 Pfam PF04055 Radical SAM superfamily 58 228 1.6E-11 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS10255 e1a703a3e4240f5a66d202990d0fb683 359 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 50 355 1.8E-121 T 11-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 WS_RS10255 e1a703a3e4240f5a66d202990d0fb683 359 Gene3D G3DSA:3.20.20.70 17 347 9.3E-57 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS10255 e1a703a3e4240f5a66d202990d0fb683 359 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 9 355 9.9E-152 T 11-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 SUPERFAMILY SSF52540 175 414 2.54E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 Gene3D G3DSA:3.40.50.300 176 355 3.8E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 SUPERFAMILY SSF140990 426 576 5.49E-28 T 11-11-2016 WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 Pfam PF01434 Peptidase family M41 407 524 1.7E-12 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 SMART SM00382 213 349 2.9E-24 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 Gene3D G3DSA:1.10.8.60 356 418 1.3E-16 T 11-11-2016 WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 217 346 1.2E-43 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 ProSitePatterns PS00674 AAA-protein family signature. 317 335 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 WS_RS07180 bf8a24891c2fa6c6ef86dbe0707db7f3 579 Gene3D G3DSA:3.40.50.300 489 576 7.5E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08655 96b218e91723cb838dead89a2ece27b5 305 Pfam PF00146 NADH dehydrogenase 8 300 2.0E-51 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 PRINTS PR00342 Rhesus blood group protein signature 314 332 5.5E-9 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 PRINTS PR00342 Rhesus blood group protein signature 228 246 5.5E-9 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 PRINTS PR00342 Rhesus blood group protein signature 134 150 5.5E-9 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 SUPERFAMILY SSF111352 32 410 1.7E-123 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 TIGRFAM TIGR00836 amt: ammonium transporter 36 432 2.1E-134 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 Gene3D G3DSA:1.10.3430.10 32 410 5.0E-134 T 11-11-2016 IPR029020 Ammonium/urea transporter WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 Pfam PF00909 Ammonium Transporter Family 38 433 5.6E-122 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 WS_RS02020 96d170c4cc015fec2cd500b2b95716e4 437 ProSitePatterns PS01219 Ammonium transporters signature. 190 215 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 WS_RS09040 8bb620b495f45ead09db203bd105a158 535 SMART SM00283 274 535 1.1E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09040 8bb620b495f45ead09db203bd105a158 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 11 2.0E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09040 8bb620b495f45ead09db203bd105a158 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 2.0E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09040 8bb620b495f45ead09db203bd105a158 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 2.0E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09040 8bb620b495f45ead09db203bd105a158 535 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 170 1.6E-18 T 11-11-2016 IPR024478 4HB MCP domain WS_RS09040 8bb620b495f45ead09db203bd105a158 535 SUPERFAMILY SSF58104 228 534 7.41E-57 T 11-11-2016 WS_RS09040 8bb620b495f45ead09db203bd105a158 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 534 8.2E-41 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09040 8bb620b495f45ead09db203bd105a158 535 Gene3D G3DSA:1.10.287.950 295 506 2.4E-44 T 11-11-2016 WS_RS06610 ea5a045ea1cfd4e0c09badc3ef27fd2d 82 SUPERFAMILY SSF54862 15 80 1.86E-14 T 11-11-2016 WS_RS06610 ea5a045ea1cfd4e0c09badc3ef27fd2d 82 Pfam PF14697 4Fe-4S dicluster domain 19 78 2.9E-10 T 11-11-2016 WS_RS06610 ea5a045ea1cfd4e0c09badc3ef27fd2d 82 Gene3D G3DSA:3.30.70.20 12 79 1.4E-14 T 11-11-2016 WS_RS06610 ea5a045ea1cfd4e0c09badc3ef27fd2d 82 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 24 35 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS06610 ea5a045ea1cfd4e0c09badc3ef27fd2d 82 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 3 81 2.4E-30 T 11-11-2016 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific WS_RS06025 3ac600aad1dff39018a3da6a436ff0bd 85 SUPERFAMILY SSF117991 5 85 2.09E-21 T 11-11-2016 IPR027471 YbeD-like domain WS_RS06025 3ac600aad1dff39018a3da6a436ff0bd 85 Pfam PF04359 Protein of unknown function (DUF493) 8 84 9.0E-19 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 WS_RS06025 3ac600aad1dff39018a3da6a436ff0bd 85 ProDom PD061650 JHP0447 HP0495 CJ0253 10 79 1.0E-25 T 11-11-2016 WS_RS06025 3ac600aad1dff39018a3da6a436ff0bd 85 Gene3D G3DSA:3.30.70.1460 8 85 2.1E-15 T 11-11-2016 IPR027471 YbeD-like domain WS_RS09455 f521379cada959239724b27ea07ec2e4 317 SUPERFAMILY SSF64182 14 309 1.96E-53 T 11-11-2016 WS_RS09455 f521379cada959239724b27ea07ec2e4 317 Pfam PF01368 DHH family 15 153 1.3E-13 T 11-11-2016 IPR001667 DDH domain WS_RS09455 f521379cada959239724b27ea07ec2e4 317 Gene3D G3DSA:3.90.1640.10 14 191 6.9E-24 T 11-11-2016 WS_RS07310 a00dfe5273e754afd11843054f6a5d7d 316 PIRSF PIRSF037004 1 312 1.2E-118 T 11-11-2016 IPR017087 Uncharacterised conserved protein UCP037004 WS_RS07310 a00dfe5273e754afd11843054f6a5d7d 316 Pfam PF04463 Protein of unknown function (DUF523) 3 144 3.1E-34 T 11-11-2016 IPR007553 Domain of unknown function DUF523 WS_RS07310 a00dfe5273e754afd11843054f6a5d7d 316 Pfam PF08349 Protein of unknown function (DUF1722) 187 303 2.3E-33 T 11-11-2016 IPR013560 Domain of unknown function DUF1722 WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 244 255 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 9 262 1.8E-108 T 11-11-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 Pfam PF13237 4Fe-4S dicluster domain 205 254 1.4E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 Pfam PF12801 4Fe-4S binding domain 168 203 2.3E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 Pfam PF12801 4Fe-4S binding domain 68 112 3.8E-10 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 213 224 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 SUPERFAMILY SSF54862 80 101 1.37E-18 T 11-11-2016 WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 SUPERFAMILY SSF54862 163 261 1.37E-18 T 11-11-2016 WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 Gene3D G3DSA:3.30.70.20 89 95 1.4E-15 T 11-11-2016 WS_RS05625 6003e1e786f54983ee6e4d88a3b42f13 280 Gene3D G3DSA:3.30.70.20 179 259 1.4E-15 T 11-11-2016 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 11-11-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 SUPERFAMILY SSF52304 1 149 7.33E-60 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 163 67.4 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 Pfam PF01220 Dehydroquinase class II 2 138 5.8E-56 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 Gene3D G3DSA:3.40.50.9100 1 143 2.6E-61 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 138 7.0E-76 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 141 1.4E-64 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07750 f76326ea8343ce919e24b5450cb0cfc0 166 PIRSF PIRSF001399 1 145 3.4E-60 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 WS_RS07125 e3d44e295b16e6a206fbd48b0409ad68 283 SUPERFAMILY SSF46565 219 273 7.85E-10 T 11-11-2016 IPR001623 DnaJ domain WS_RS07125 e3d44e295b16e6a206fbd48b0409ad68 283 Gene3D G3DSA:1.10.287.110 199 273 1.3E-12 T 11-11-2016 IPR001623 DnaJ domain WS_RS07125 e3d44e295b16e6a206fbd48b0409ad68 283 SMART SM00271 215 276 1.0E-8 T 11-11-2016 IPR001623 DnaJ domain WS_RS07125 e3d44e295b16e6a206fbd48b0409ad68 283 Pfam PF00226 DnaJ domain 227 273 3.1E-9 T 11-11-2016 IPR001623 DnaJ domain WS_RS03600 c3b6994470be0170b47457931c939abb 445 Gene3D G3DSA:1.10.760.10 236 248 1.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03600 c3b6994470be0170b47457931c939abb 445 Gene3D G3DSA:1.10.760.10 364 442 1.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03600 c3b6994470be0170b47457931c939abb 445 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 369 440 5.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03600 c3b6994470be0170b47457931c939abb 445 SUPERFAMILY SSF46626 353 443 1.69E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04800 e13883964e6dad363f0556590deb5413 345 Hamap MF_00625 Selenide, water dikinase [selD]. 4 345 37.142 T 11-11-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 WS_RS04800 e13883964e6dad363f0556590deb5413 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 167 340 1.3E-27 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS04800 e13883964e6dad363f0556590deb5413 345 PIRSF PIRSF036407 1 345 6.2E-123 T 11-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 WS_RS04800 e13883964e6dad363f0556590deb5413 345 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 312 2.4E-104 T 11-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 WS_RS04800 e13883964e6dad363f0556590deb5413 345 SUPERFAMILY SSF55326 7 160 2.39E-35 T 11-11-2016 WS_RS04800 e13883964e6dad363f0556590deb5413 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 154 5.3E-11 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS04800 e13883964e6dad363f0556590deb5413 345 SUPERFAMILY SSF56042 161 340 1.32E-45 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS04800 e13883964e6dad363f0556590deb5413 345 Gene3D G3DSA:3.90.650.10 167 340 1.2E-13 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS04800 e13883964e6dad363f0556590deb5413 345 Gene3D G3DSA:3.30.1330.10 30 160 2.8E-19 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS01440 b4011e3d9c29b378319e54123827e158 215 Gene3D G3DSA:3.40.1050.10 1 206 2.2E-64 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 WS_RS01440 b4011e3d9c29b378319e54123827e158 215 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 WS_RS01440 b4011e3d9c29b378319e54123827e158 215 SMART SM00947 27 196 1.4E-59 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 WS_RS01440 b4011e3d9c29b378319e54123827e158 215 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 84 104 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 WS_RS01440 b4011e3d9c29b378319e54123827e158 215 SUPERFAMILY SSF53056 1 207 1.18E-60 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 WS_RS01440 b4011e3d9c29b378319e54123827e158 215 Pfam PF00484 Carbonic anhydrase 34 192 4.0E-48 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 SMART SM00862 160 230 8.9E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 230 2.8E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 SUPERFAMILY SSF46894 147 230 5.67E-16 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 SUPERFAMILY SSF52172 5 131 3.13E-30 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 Pfam PF00072 Response regulator receiver domain 9 119 6.3E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 Gene3D G3DSA:3.40.50.2300 3 126 2.7E-29 T 11-11-2016 WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 SMART SM00448 7 119 1.2E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09185 16e29542e7acd77895c40a6119718a6c 232 Gene3D G3DSA:1.10.10.10 148 231 3.1E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS07210 df3a3331157755f09ca2d938cb94d73f 388 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 3.4E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS07210 df3a3331157755f09ca2d938cb94d73f 388 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 223 3.4E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS07210 df3a3331157755f09ca2d938cb94d73f 388 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 299 3.4E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS07210 df3a3331157755f09ca2d938cb94d73f 388 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 248 385 1.9E-32 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS07210 df3a3331157755f09ca2d938cb94d73f 388 SUPERFAMILY SSF58104 192 384 5.23E-49 T 11-11-2016 WS_RS07210 df3a3331157755f09ca2d938cb94d73f 388 SMART SM00283 195 388 7.4E-12 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS07210 df3a3331157755f09ca2d938cb94d73f 388 Gene3D G3DSA:1.10.287.950 197 386 4.6E-42 T 11-11-2016 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 Pfam PF02910 Fumarate reductase flavoprotein C-term 468 597 1.9E-36 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 Gene3D G3DSA:1.20.58.100 440 547 9.7E-35 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 Gene3D G3DSA:3.90.700.10 258 364 1.3E-35 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 SUPERFAMILY SSF46977 458 654 4.32E-59 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 Gene3D G3DSA:4.10.80.40 548 582 4.2E-11 T 11-11-2016 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 SUPERFAMILY SSF51905 4 116 1.6E-56 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 SUPERFAMILY SSF51905 145 274 1.6E-56 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 SUPERFAMILY SSF51905 374 433 1.6E-56 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 Gene3D G3DSA:3.50.50.60 366 430 5.9E-90 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 Gene3D G3DSA:3.50.50.60 3 257 5.9E-90 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 PIRSF PIRSF000171 1 579 6.9E-30 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 597 5.3E-245 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 11-11-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 SUPERFAMILY SSF56425 251 370 4.64E-37 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03990 c515ee5daad8c5ce62dc1d65660db2e8 656 Pfam PF00890 FAD binding domain 7 410 2.0E-127 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS04040 3c9e31ba04cd01c17f1e1991b14fdb97 94 SUPERFAMILY SSF47413 17 78 2.88E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 WS_RS04040 3c9e31ba04cd01c17f1e1991b14fdb97 94 Gene3D G3DSA:1.10.260.40 18 79 5.7E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 WS_RS08980 cba2e21c36015ab135f8d4b14338d2aa 83 SUPERFAMILY SSF54862 5 76 2.33E-19 T 11-11-2016 WS_RS08980 cba2e21c36015ab135f8d4b14338d2aa 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS08980 cba2e21c36015ab135f8d4b14338d2aa 83 Gene3D G3DSA:3.30.70.20 4 74 3.0E-19 T 11-11-2016 WS_RS08980 cba2e21c36015ab135f8d4b14338d2aa 83 Pfam PF13187 4Fe-4S dicluster domain 8 59 6.6E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS00530 ff7446cd0b18a1a38795817593148814 274 Gene3D G3DSA:3.30.1300.10 173 274 5.3E-28 T 11-11-2016 WS_RS00530 ff7446cd0b18a1a38795817593148814 274 Gene3D G3DSA:3.40.50.620 1 172 2.2E-67 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00530 ff7446cd0b18a1a38795817593148814 274 Hamap MF_00158 Pantothenate synthetase [panC]. 2 274 37.453 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 WS_RS00530 ff7446cd0b18a1a38795817593148814 274 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 274 9.8E-93 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 WS_RS00530 ff7446cd0b18a1a38795817593148814 274 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 66 3.1E-8 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 WS_RS00530 ff7446cd0b18a1a38795817593148814 274 SUPERFAMILY SSF52374 1 274 1.54E-93 T 11-11-2016 WS_RS00530 ff7446cd0b18a1a38795817593148814 274 Pfam PF02569 Pantoate-beta-alanine ligase 3 272 3.0E-92 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 WS_RS01990 4bae6a399a8748f18e01e187e291fa2b 415 Gene3D G3DSA:1.20.1250.20 12 198 2.2E-15 T 11-11-2016 WS_RS01990 4bae6a399a8748f18e01e187e291fa2b 415 Gene3D G3DSA:1.20.1250.20 218 396 1.9E-10 T 11-11-2016 WS_RS01990 4bae6a399a8748f18e01e187e291fa2b 415 Pfam PF05977 Transmembrane secretion effector 13 390 4.9E-33 T 11-11-2016 IPR010290 Transmembrane secretion effector WS_RS01990 4bae6a399a8748f18e01e187e291fa2b 415 SUPERFAMILY SSF103473 9 398 1.7E-39 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 SMART SM00304 360 412 3.7E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 631 6.2E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 Pfam PF00672 HAMP domain 343 408 2.4E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 Gene3D G3DSA:3.30.565.10 490 631 1.5E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 SUPERFAMILY SSF55874 497 631 2.49E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 SUPERFAMILY SSF158472 360 409 2.09E-7 T 11-11-2016 WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 Pfam PF07568 Histidine kinase 438 511 7.3E-22 T 11-11-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain WS_RS09190 b2cb5787d1b0fb399b67b6165993e3d4 631 Pfam PF08269 Cache domain 155 330 8.8E-21 T 11-11-2016 IPR004010 Double Cache domain 2 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 SUPERFAMILY SSF50156 387 473 1.97E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 Pfam PF13365 Trypsin-like peptidase domain 103 238 2.6E-35 T 11-11-2016 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 Gene3D G3DSA:2.40.10.10 44 164 1.6E-35 T 11-11-2016 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 SUPERFAMILY SSF50494 41 265 4.79E-62 T 11-11-2016 IPR009003 Peptidase S1, PA clan WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 SMART SM00228 399 466 0.0041 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 SMART SM00228 277 357 3.8E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 7.4E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 PRINTS PR00834 HtrA/DegQ protease family signature 134 154 7.4E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 7.4E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 PRINTS PR00834 HtrA/DegQ protease family signature 315 327 7.4E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 PRINTS PR00834 HtrA/DegQ protease family signature 112 124 7.4E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 PRINTS PR00834 HtrA/DegQ protease family signature 174 198 7.4E-53 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 Gene3D G3DSA:2.30.42.10 280 372 4.2E-25 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 Gene3D G3DSA:2.30.42.10 387 473 4.7E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 Gene3D G3DSA:2.40.10.10 166 279 1.1E-42 T 11-11-2016 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 Pfam PF13180 PDZ domain 277 366 1.0E-19 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 Pfam PF13180 PDZ domain 402 467 3.5E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 SUPERFAMILY SSF50156 260 365 2.37E-19 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS10485 84eb1fd017959f19f7d2f7a3b19ff9c3 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 44 472 6.1E-138 T 11-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 WS_RS04795 f2712a3815cdee19a594109ba0875983 632 SUPERFAMILY SSF82861 330 416 3.79E-11 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 WS_RS04795 f2712a3815cdee19a594109ba0875983 632 Gene3D G3DSA:2.30.30.60 434 482 2.3E-20 T 11-11-2016 WS_RS04795 f2712a3815cdee19a594109ba0875983 632 Gene3D G3DSA:3.30.70.100 489 603 1.8E-11 T 11-11-2016 WS_RS04795 f2712a3815cdee19a594109ba0875983 632 Pfam PF00924 Mechanosensitive ion channel 375 606 2.1E-70 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 WS_RS04795 f2712a3815cdee19a594109ba0875983 632 SUPERFAMILY SSF50182 417 483 1.83E-19 T 11-11-2016 IPR010920 LSM domain WS_RS04795 f2712a3815cdee19a594109ba0875983 632 SUPERFAMILY SSF82689 556 616 6.28E-13 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 WS_RS04795 f2712a3815cdee19a594109ba0875983 632 SUPERFAMILY SSF82689 489 528 6.28E-13 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 WS_RS04795 f2712a3815cdee19a594109ba0875983 632 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 447 481 - T 11-11-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 WS_RS08025 c2fcfb6cbba36398d5c4fee40f70fd71 184 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.3E-36 T 11-11-2016 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08025 c2fcfb6cbba36398d5c4fee40f70fd71 184 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-11-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08025 c2fcfb6cbba36398d5c4fee40f70fd71 184 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 38.525 T 11-11-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08025 c2fcfb6cbba36398d5c4fee40f70fd71 184 SUPERFAMILY SSF55282 1 178 2.19E-66 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08025 c2fcfb6cbba36398d5c4fee40f70fd71 184 Gene3D G3DSA:3.30.1440.10 3 178 1.5E-65 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08025 c2fcfb6cbba36398d5c4fee40f70fd71 184 Pfam PF00281 Ribosomal protein L5 24 80 3.6E-19 T 11-11-2016 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08025 c2fcfb6cbba36398d5c4fee40f70fd71 184 PIRSF PIRSF002161 1 183 5.0E-66 T 11-11-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS03455 43f52d21dd3d6bcab7c05dee4a58dc2b 176 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 170 1.5E-30 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 WS_RS03455 43f52d21dd3d6bcab7c05dee4a58dc2b 176 SUPERFAMILY SSF53323 1 174 4.05E-28 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 WS_RS03455 43f52d21dd3d6bcab7c05dee4a58dc2b 176 Gene3D G3DSA:3.40.920.10 1 170 4.6E-25 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 Pfam PF00772 DnaB-like helicase N terminal domain 3 98 3.5E-16 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 4 448 1.8E-145 T 11-11-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 SUPERFAMILY SSF52540 173 384 5.33E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 SUPERFAMILY SSF52540 414 440 5.33E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 Gene3D G3DSA:3.40.50.300 171 449 2.0E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 Gene3D G3DSA:1.10.860.10 6 97 7.1E-11 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 SUPERFAMILY SSF48024 3 106 9.68E-18 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 WS_RS01760 4fa2b6f58a6c38946daa5189de98fc55 473 Pfam PF03796 DnaB-like helicase C terminal domain 173 446 3.4E-104 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 Gene3D G3DSA:3.90.800.10 66 173 3.5E-24 T 11-11-2016 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 Gene3D G3DSA:3.40.50.620 174 224 2.2E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 Gene3D G3DSA:3.40.50.620 2 65 2.2E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 1 438 24.624 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 Gene3D G3DSA:1.10.1160.10 226 307 3.0E-27 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 SUPERFAMILY SSF52374 2 291 6.7E-84 T 11-11-2016 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 297 3.2E-75 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 Gene3D G3DSA:1.10.10.350 367 421 1.2E-5 T 11-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 3.9E-22 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 3.9E-22 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 PRINTS PR00987 Glutamyl-tRNA synthetase signature 172 182 3.9E-22 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 PRINTS PR00987 Glutamyl-tRNA synthetase signature 188 196 3.9E-22 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 3.9E-22 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 1 424 1.1E-138 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS01350 11f76f76cfd5ec9cfef9e80fd6e19875 438 SUPERFAMILY SSF48163 273 422 1.44E-22 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 WS_RS02790 ed76208be8fe92cdd81222ce4b5fdaee 339 Gene3D G3DSA:1.10.3720.10 130 335 8.7E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS02790 ed76208be8fe92cdd81222ce4b5fdaee 339 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 11 43 2.8E-6 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain WS_RS02790 ed76208be8fe92cdd81222ce4b5fdaee 339 SUPERFAMILY SSF161098 133 320 4.19E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS02790 ed76208be8fe92cdd81222ce4b5fdaee 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 156 338 1.5E-27 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS07205 20f786173d649ca38ebfeab1ec127149 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 373 1.5E-140 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 WS_RS07205 20f786173d649ca38ebfeab1ec127149 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 366 52.684 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 WS_RS07205 20f786173d649ca38ebfeab1ec127149 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 368 3.2E-83 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 WS_RS07205 20f786173d649ca38ebfeab1ec127149 377 SUPERFAMILY SSF51713 1 371 6.93E-144 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 WS_RS07205 20f786173d649ca38ebfeab1ec127149 377 Gene3D G3DSA:3.20.20.105 1 372 2.6E-147 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 WS_RS07205 20f786173d649ca38ebfeab1ec127149 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 374 8.7E-150 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Gene3D G3DSA:2.40.50.140 16 93 1.1E-9 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SUPERFAMILY SSF50249 447 544 2.22E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Gene3D G3DSA:2.40.50.140 284 365 2.1E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SUPERFAMILY SSF50249 201 286 1.24E-20 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SUPERFAMILY SSF50249 269 361 1.22E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SMART SM00316 115 180 0.0011 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SMART SM00316 199 269 1.5E-17 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SMART SM00316 456 523 4.5E-15 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SMART SM00316 284 356 4.8E-26 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SMART SM00316 30 96 1.6E-5 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SMART SM00316 371 441 3.4E-20 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 PRINTS PR00681 Ribosomal protein S1 signature 32 50 8.2E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 PRINTS PR00681 Ribosomal protein S1 signature 120 136 8.2E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 PRINTS PR00681 Ribosomal protein S1 signature 164 184 8.2E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 PRINTS PR00681 Ribosomal protein S1 signature 299 318 8.2E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 PRINTS PR00681 Ribosomal protein S1 signature 221 242 8.2E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 PRINTS PR00681 Ribosomal protein S1 signature 50 64 8.2E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 PRINTS PR00681 Ribosomal protein S1 signature 339 357 8.2E-36 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Pfam PF00575 S1 RNA binding domain 204 269 4.6E-14 T 11-11-2016 IPR003029 S1 domain GO:0003676 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Pfam PF00575 S1 RNA binding domain 31 93 2.8E-5 T 11-11-2016 IPR003029 S1 domain GO:0003676 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Pfam PF00575 S1 RNA binding domain 455 523 3.4E-8 T 11-11-2016 IPR003029 S1 domain GO:0003676 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Pfam PF00575 S1 RNA binding domain 283 356 8.9E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Pfam PF00575 S1 RNA binding domain 370 441 2.7E-17 T 11-11-2016 IPR003029 S1 domain GO:0003676 WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Gene3D G3DSA:2.40.50.140 204 283 5.2E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SUPERFAMILY SSF50249 116 183 6.79E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Gene3D G3DSA:2.40.50.140 366 442 3.9E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SUPERFAMILY SSF50249 354 447 2.86E-20 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 SUPERFAMILY SSF50249 22 113 1.19E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06275 5b67b3e7394f835d162376ce07aeb452 553 Gene3D G3DSA:2.40.50.140 446 525 2.7E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 Gene3D G3DSA:3.40.50.620 20 310 1.4E-93 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 SUPERFAMILY SSF52374 3 317 7.78E-85 T 11-11-2016 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 466 2.0E-163 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 SUPERFAMILY SSF47323 321 466 1.96E-29 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 467 36.568 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 Gene3D G3DSA:1.20.120.640 311 394 1.0E-10 T 11-11-2016 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 2.6E-26 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 2.6E-26 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 192 210 2.6E-26 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 2.6E-26 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 WS_RS02170 0c1b5e71b1c7b3bff96a6ebba63e96fa 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 318 2.2E-123 T 11-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 285 3.5E-48 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 309 4.5E-21 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 SUPERFAMILY SSF51735 99 286 5.99E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 SUPERFAMILY SSF52283 1 124 3.4E-29 T 11-11-2016 WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 Gene3D G3DSA:3.40.50.720 114 286 2.0E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10105 cd083d8c6a18133d158289f69d28677d 312 Gene3D G3DSA:3.40.50.720 3 113 8.6E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 SUPERFAMILY SSF64518 1 518 1.44E-93 T 11-11-2016 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 Pfam PF07196 Flagellin hook IN motif 258 309 1.0E-12 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 Pfam PF07196 Flagellin hook IN motif 194 253 9.6E-8 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 Pfam PF00700 Bacterial flagellin C-terminal helical region 432 517 2.3E-26 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 Gene3D G3DSA:1.20.1330.10 54 171 2.4E-38 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 Gene3D G3DSA:1.20.1330.10 420 474 2.4E-38 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 6.4E-41 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 PRINTS PR00207 Flagellin signature 111 134 9.1E-17 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 PRINTS PR00207 Flagellin signature 76 95 9.1E-17 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 WS_RS07145 7485be8a88a3a8849a5ae66a9effea97 518 PRINTS PR00207 Flagellin signature 37 54 9.1E-17 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.7E-101 T 11-11-2016 IPR010213 Transcription termination factor NusA GO:0003723 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 Gene3D G3DSA:3.30.300.20 285 343 3.8E-18 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 Gene3D G3DSA:3.30.300.20 204 282 5.1E-31 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 SUPERFAMILY SSF69705 3 126 1.02E-25 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 Gene3D G3DSA:2.40.50.140 139 203 4.0E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 SMART SM00316 137 205 0.0012 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 Gene3D G3DSA:3.30.1480.10 3 114 1.3E-19 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 SUPERFAMILY SSF54814 286 343 7.19E-10 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 SUPERFAMILY SSF54814 205 282 3.92E-25 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 Pfam PF08529 NusA N-terminal domain 4 119 2.5E-18 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 SUPERFAMILY SSF50249 136 204 6.18E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 370 23.073 T 11-11-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 WS_RS08370 4176fa993b7a0e555be8f96da78a9927 375 Pfam PF13184 NusA-like KH domain 235 303 3.9E-22 T 11-11-2016 IPR025249 KH domain, NusA-like GO:0003723 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 Pfam PF02421 Ferrous iron transport protein B 8 162 2.6E-56 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 Pfam PF07670 Nucleoside recognition 293 386 8.7E-10 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 Pfam PF07670 Nucleoside recognition 459 694 4.3E-15 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 SUPERFAMILY SSF52540 6 169 1.47E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 Pfam PF07664 Ferrous iron transport protein B C terminus 401 454 3.6E-15 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 30 48 5.6E-8 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 9 29 5.6E-8 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 57 72 5.6E-8 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 Gene3D G3DSA:3.40.50.300 4 169 5.7E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06730 b79801788c0f8f8ad9f2aeec57d4c782 759 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 125 2.4E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS06570 929e18e7af3ef67eb51b97cbf90518f3 128 Gene3D G3DSA:3.40.50.720 1 92 8.8E-8 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06570 929e18e7af3ef67eb51b97cbf90518f3 128 SUPERFAMILY SSF51735 5 78 3.1E-9 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS06545 df518768785a8b02bf422185f923ee73 349 SUPERFAMILY SSF50331 224 342 6.29E-7 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal WS_RS06545 df518768785a8b02bf422185f923ee73 349 Gene3D G3DSA:3.40.50.300 3 228 8.2E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06545 df518768785a8b02bf422185f923ee73 349 SUPERFAMILY SSF52540 7 228 8.77E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06545 df518768785a8b02bf422185f923ee73 349 SMART SM00382 30 225 4.8E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06545 df518768785a8b02bf422185f923ee73 349 Pfam PF00005 ABC transporter 24 168 2.4E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 Pfam PF02839 Carbohydrate binding domain 446 485 1.8E-7 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 248 7.5E-29 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 481 726 8.6E-28 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 SUPERFAMILY SSF117143 493 705 1.7E-39 T 11-11-2016 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 SUPERFAMILY SSF117143 87 212 1.7E-39 T 11-11-2016 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 SMART SM00495 445 488 0.062 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 SMART SM00495 394 437 14.0 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 Gene3D G3DSA:2.10.10.20 443 489 9.3E-4 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 Pfam PF00460 Flagella basal body rod protein 16 35 2.6E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site WS_RS08280 ff997718a61effcd92490dd29cbf61c7 745 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 653 743 9.9E-24 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain WS_RS02870 d6eb3263b64071c2d796daa166bae3e6 240 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 2 237 6.9E-78 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 WS_RS02870 d6eb3263b64071c2d796daa166bae3e6 240 Pfam PF13847 Methyltransferase domain 56 161 5.6E-16 T 11-11-2016 IPR025714 Methyltransferase domain WS_RS02870 d6eb3263b64071c2d796daa166bae3e6 240 SUPERFAMILY SSF53335 15 237 2.15E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02870 d6eb3263b64071c2d796daa166bae3e6 240 Gene3D G3DSA:3.40.50.150 15 237 8.2E-54 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02870 d6eb3263b64071c2d796daa166bae3e6 240 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 1 237 38.683 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 WS_RS02870 d6eb3263b64071c2d796daa166bae3e6 240 PIRSF PIRSF006325 1 238 5.7E-84 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 345 438 4.2E-17 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 Pfam PF04055 Radical SAM superfamily 29 212 1.2E-23 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 Gene3D G3DSA:3.30.420.130 337 436 1.1E-19 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 10 437 7.9E-149 T 11-11-2016 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 SUPERFAMILY SSF53146 337 441 9.55E-19 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 SUPERFAMILY SSF102114 23 270 7.85E-37 T 11-11-2016 WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 Gene3D G3DSA:3.20.20.70 23 286 8.3E-42 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06665 a02957d64f89495871e3bfa8813d6b56 449 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 30 41 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS04490 b24448deacc8f580d0b4a012501a79c1 269 Pfam PF12800 4Fe-4S binding domain 65 77 0.016 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS04490 b24448deacc8f580d0b4a012501a79c1 269 Pfam PF13247 4Fe-4S dicluster domain 104 197 3.0E-29 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS04490 b24448deacc8f580d0b4a012501a79c1 269 SUPERFAMILY SSF54862 54 245 8.16E-72 T 11-11-2016 WS_RS04490 b24448deacc8f580d0b4a012501a79c1 269 Gene3D G3DSA:3.30.70.20 122 160 3.9E-24 T 11-11-2016 WS_RS04490 b24448deacc8f580d0b4a012501a79c1 269 Gene3D G3DSA:3.30.70.20 161 233 3.8E-27 T 11-11-2016 WS_RS04490 b24448deacc8f580d0b4a012501a79c1 269 Gene3D G3DSA:3.30.70.20 54 121 6.7E-18 T 11-11-2016 WS_RS04490 b24448deacc8f580d0b4a012501a79c1 269 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 142 153 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 PIRSF PIRSF006485 1 462 8.3E-145 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 Pfam PF01926 50S ribosome-binding GTPase 4 118 1.1E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 Pfam PF01926 50S ribosome-binding GTPase 202 319 1.4E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 Gene3D G3DSA:3.30.300.20 380 456 6.3E-30 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 453 7.0E-152 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 154 1.2E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 200 363 8.5E-30 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 Gene3D G3DSA:3.40.50.300 3 162 3.3E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 Gene3D G3DSA:3.40.50.300 197 379 9.6E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 SUPERFAMILY SSF52540 3 162 1.54E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 374 454 7.8E-27 T 11-11-2016 IPR032859 GTPase Der, C-terminal KH-domain-like WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 Hamap MF_00195 GTPase Der [der]. 1 457 34.059 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 SUPERFAMILY SSF52540 189 456 1.11E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 89 1.2E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS09610 164b2e9a9c26732562603c6c7395d58d 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 1.2E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS08035 10a5772244fb06bfbaeb9c456022208c 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.6E-57 T 11-11-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 WS_RS08035 10a5772244fb06bfbaeb9c456022208c 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.7E-55 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 WS_RS08035 10a5772244fb06bfbaeb9c456022208c 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-11-2016 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08035 10a5772244fb06bfbaeb9c456022208c 122 SUPERFAMILY SSF50193 1 122 7.19E-53 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 WS_RS08035 10a5772244fb06bfbaeb9c456022208c 122 SMART SM01374 1 122 2.9E-84 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 WS_RS08035 10a5772244fb06bfbaeb9c456022208c 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.283 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 WS_RS08035 10a5772244fb06bfbaeb9c456022208c 122 Gene3D G3DSA:2.40.150.20 1 122 4.8E-55 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 WS_RS09845 30dae092b3604c190ffaae4e5642a641 69 Gene3D G3DSA:3.10.20.30 3 67 1.7E-18 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS09845 30dae092b3604c190ffaae4e5642a641 69 Pfam PF02597 ThiS family 4 67 1.1E-12 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 WS_RS09845 30dae092b3604c190ffaae4e5642a641 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 67 7.5E-18 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis WS_RS09845 30dae092b3604c190ffaae4e5642a641 69 SUPERFAMILY SSF54285 3 66 4.09E-15 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp WS_RS03410 062a575e27390664b6f51ed976d78ddb 293 SUPERFAMILY SSF103481 40 142 2.88E-10 T 11-11-2016 WS_RS03410 062a575e27390664b6f51ed976d78ddb 293 Pfam PF00892 EamA-like transporter family 157 281 1.7E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS03410 062a575e27390664b6f51ed976d78ddb 293 Pfam PF00892 EamA-like transporter family 9 138 1.5E-16 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS10270 6b5d49f546c6ad65ebcbc2387b3800b6 781 SUPERFAMILY SSF52009 696 773 3.27E-13 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 WS_RS10270 6b5d49f546c6ad65ebcbc2387b3800b6 781 Gene3D G3DSA:3.30.470.20 167 219 5.3E-5 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS10270 6b5d49f546c6ad65ebcbc2387b3800b6 781 Gene3D G3DSA:3.50.30.10 701 775 6.5E-11 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 WS_RS10270 6b5d49f546c6ad65ebcbc2387b3800b6 781 Gene3D G3DSA:3.30.1490.20 48 100 1.4E-5 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS10270 6b5d49f546c6ad65ebcbc2387b3800b6 781 Pfam PF00391 PEP-utilising enzyme, mobile domain 705 758 2.7E-9 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 WS_RS10270 6b5d49f546c6ad65ebcbc2387b3800b6 781 SUPERFAMILY SSF56059 53 221 2.74E-10 T 11-11-2016 WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.4E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 Pfam PF03466 LysR substrate binding domain 94 228 3.1E-11 T 11-11-2016 IPR005119 LysR, substrate-binding WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 Gene3D G3DSA:3.40.190.10 94 210 5.0E-15 T 11-11-2016 WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 SUPERFAMILY SSF53850 93 295 6.67E-21 T 11-11-2016 WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 Gene3D G3DSA:1.10.10.10 4 82 1.7E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04195 de42e42a6eb2c0029ba389b3fbf8d6a2 304 SUPERFAMILY SSF46785 3 112 1.6E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS01705 b743d4df39053b642b497fdc28ba0bc5 421 Gene3D G3DSA:3.65.10.10 21 221 3.7E-60 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 WS_RS01705 b743d4df39053b642b497fdc28ba0bc5 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 2.2E-173 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS01705 b743d4df39053b642b497fdc28ba0bc5 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 43.217 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS01705 b743d4df39053b642b497fdc28ba0bc5 421 Gene3D G3DSA:3.65.10.10 223 418 1.1E-52 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 WS_RS01705 b743d4df39053b642b497fdc28ba0bc5 421 SUPERFAMILY SSF55205 1 418 3.11E-127 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 WS_RS01705 b743d4df39053b642b497fdc28ba0bc5 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 5.3E-91 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 WS_RS08670 af15bb3c39fada30ccd1c0c2bce5379a 578 SMART SM00790 1 208 3.5E-97 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS08670 af15bb3c39fada30ccd1c0c2bce5379a 578 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 225 559 1.9E-74 T 11-11-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS08670 af15bb3c39fada30ccd1c0c2bce5379a 578 Gene3D G3DSA:1.10.599.10 383 576 3.3E-49 T 11-11-2016 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 WS_RS08670 af15bb3c39fada30ccd1c0c2bce5379a 578 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 4 205 2.1E-56 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS08670 af15bb3c39fada30ccd1c0c2bce5379a 578 SUPERFAMILY SSF56228 2 209 8.24E-60 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS08670 af15bb3c39fada30ccd1c0c2bce5379a 578 SUPERFAMILY SSF48310 215 577 4.84E-103 T 11-11-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS08670 af15bb3c39fada30ccd1c0c2bce5379a 578 Gene3D G3DSA:3.60.9.10 3 208 3.3E-63 T 11-11-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 WS_RS01355 7d53a85c3db8e0b39c17f0b5d119331f 298 SUPERFAMILY SSF103481 190 288 2.22E-11 T 11-11-2016 WS_RS01355 7d53a85c3db8e0b39c17f0b5d119331f 298 Pfam PF00892 EamA-like transporter family 11 140 4.5E-15 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS01355 7d53a85c3db8e0b39c17f0b5d119331f 298 Pfam PF00892 EamA-like transporter family 149 283 8.4E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS01355 7d53a85c3db8e0b39c17f0b5d119331f 298 SUPERFAMILY SSF103481 43 142 4.05E-12 T 11-11-2016 WS_RS06755 9cf237ab6cc46a37516ad102bd198a7b 643 Gene3D G3DSA:3.40.50.300 2 228 5.0E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06755 9cf237ab6cc46a37516ad102bd198a7b 643 Pfam PF00005 ABC transporter 25 173 6.5E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS06755 9cf237ab6cc46a37516ad102bd198a7b 643 Pfam PF02687 FtsX-like permease family 525 636 4.1E-20 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 WS_RS06755 9cf237ab6cc46a37516ad102bd198a7b 643 SMART SM00382 34 221 2.7E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06755 9cf237ab6cc46a37516ad102bd198a7b 643 Pfam PF12704 MacB-like periplasmic core domain 269 486 9.2E-34 T 11-11-2016 IPR025857 MacB-like periplasmic core domain WS_RS06755 9cf237ab6cc46a37516ad102bd198a7b 643 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS06755 9cf237ab6cc46a37516ad102bd198a7b 643 SUPERFAMILY SSF52540 5 227 2.66E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06315 a1d8b3247bf2e5bb4c10c82168f3e5f1 105 PIRSF PIRSF003203 1 105 2.5E-35 T 11-11-2016 IPR008407 Branched-chain amino acid transport, AzlD WS_RS06315 a1d8b3247bf2e5bb4c10c82168f3e5f1 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 101 2.5E-21 T 11-11-2016 IPR008407 Branched-chain amino acid transport, AzlD WS_RS00015 867985007bc529ac61c77e0f8979f150 772 SUPERFAMILY SSF56719 391 556 3.14E-85 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 SUPERFAMILY SSF56719 698 767 3.14E-85 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 ProSitePatterns PS00177 DNA topoisomerase II signature. 419 427 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 SUPERFAMILY SSF55874 5 217 6.29E-70 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Gene3D G3DSA:3.40.50.670 686 754 1.7E-92 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Gene3D G3DSA:3.40.50.670 401 546 1.7E-92 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 SMART SM00433 35 765 6.0E-277 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Gene3D G3DSA:3.30.230.10 219 389 9.4E-67 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Pfam PF00204 DNA gyrase B 220 387 8.0E-59 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Gene3D G3DSA:3.30.565.10 6 217 7.1E-88 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00015 867985007bc529ac61c77e0f8979f150 772 SUPERFAMILY SSF54211 220 388 3.6E-54 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS00015 867985007bc529ac61c77e0f8979f150 772 SMART SM00387 31 175 1.7E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 6 16 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 741 757 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 180 195 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 371 391 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 725 737 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 239 257 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 309 325 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 467 476 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 195 208 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR01159 DNA gyrase subunit B signature 357 371 6.6E-62 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 174 1.2E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 700 761 7.0E-29 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Pfam PF01751 Toprim domain 416 525 3.9E-18 T 11-11-2016 IPR006171 Toprim domain WS_RS00015 867985007bc529ac61c77e0f8979f150 772 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 772 3.5E-293 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 483 499 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 521 533 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 417 431 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 704 720 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 501 518 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 113 127 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 265 278 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 35 50 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 PRINTS PR00418 DNA topoisomerase II family signature 70 83 8.0E-71 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 WS_RS00015 867985007bc529ac61c77e0f8979f150 772 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 772 95.392 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 SUPERFAMILY SSF52540 64 285 1.3E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 425 3.7E-7 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 SUPERFAMILY SSF54211 252 266 7.59E-32 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 SUPERFAMILY SSF54211 299 446 7.59E-32 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 SMART SM00382 87 242 3.9E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 Gene3D G3DSA:3.30.230.10 283 446 1.9E-28 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 PRINTS PR01874 DNA repair protein radA signature 245 271 3.6E-89 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 PRINTS PR01874 DNA repair protein radA signature 79 107 3.6E-89 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 PRINTS PR01874 DNA repair protein radA signature 10 34 3.6E-89 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 PRINTS PR01874 DNA repair protein radA signature 210 238 3.6E-89 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 PRINTS PR01874 DNA repair protein radA signature 121 138 3.6E-89 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 PRINTS PR01874 DNA repair protein radA signature 318 341 3.6E-89 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 PRINTS PR01874 DNA repair protein radA signature 171 195 3.6E-89 T 11-11-2016 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 444 5.1E-192 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 Hamap MF_01498 DNA repair protein RadA [radA]. 21 445 41.737 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 Gene3D G3DSA:3.40.50.300 57 273 9.0E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00360 08b683250f35360354f6e8b2d0576bc3 447 Pfam PF13481 AAA domain 62 219 1.7E-14 T 11-11-2016 WS_RS05430 35f478934189e9e5fe12f6faf1d2800f 144 SUPERFAMILY SSF140931 6 92 1.27E-8 T 11-11-2016 IPR003812 Fido domain WS_RS05430 35f478934189e9e5fe12f6faf1d2800f 144 Pfam PF02661 Fic/DOC family 7 85 4.7E-9 T 11-11-2016 IPR003812 Fido domain WS_RS05430 35f478934189e9e5fe12f6faf1d2800f 144 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 13 116 9.7E-13 T 11-11-2016 IPR006440 Death on curing protein GO:0016301 WS_RS05430 35f478934189e9e5fe12f6faf1d2800f 144 Gene3D G3DSA:1.10.3290.10 37 112 8.4E-6 T 11-11-2016 IPR003812 Fido domain WS_RS06540 6ce45471f178e7cc81cf0a328c719a16 231 Gene3D G3DSA:1.10.3720.10 11 229 4.1E-29 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS06540 6ce45471f178e7cc81cf0a328c719a16 231 SUPERFAMILY SSF161098 10 225 2.88E-32 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS06540 6ce45471f178e7cc81cf0a328c719a16 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 230 2.2E-11 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS01265 298802d6a47c4358375e5b833f1d38da 343 SUPERFAMILY SSF53756 10 341 8.37E-55 T 11-11-2016 WS_RS01265 298802d6a47c4358375e5b833f1d38da 343 Pfam PF00534 Glycosyl transferases group 1 160 307 4.6E-25 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 WS_RS01265 298802d6a47c4358375e5b833f1d38da 343 Pfam PF13439 Glycosyltransferase Family 4 97 151 3.2E-11 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS01265 298802d6a47c4358375e5b833f1d38da 343 Gene3D G3DSA:3.40.50.2000 132 283 1.2E-21 T 11-11-2016 WS_RS10340 1aafa3a553bb691f9bd1809ca33e6da8 377 SUPERFAMILY SSF53335 141 350 3.47E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10340 1aafa3a553bb691f9bd1809ca33e6da8 377 Pfam PF08241 Methyltransferase domain 149 246 6.0E-16 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 WS_RS10340 1aafa3a553bb691f9bd1809ca33e6da8 377 Gene3D G3DSA:3.40.50.150 102 312 1.7E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 261 6.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 PRINTS PR00344 Bacterial sensor protein C-terminal signature 212 226 6.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 PRINTS PR00344 Bacterial sensor protein C-terminal signature 230 240 6.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 280 6.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 Gene3D G3DSA:1.10.287.130 64 121 2.3E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 SUPERFAMILY SSF55874 142 281 8.12E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 SUPERFAMILY SSF47384 63 127 8.83E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 Gene3D G3DSA:3.30.565.10 142 279 6.4E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 183 279 7.3E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10365 f4d4cf08c10a3728948cd3b746639954 298 SMART SM00387 179 283 1.1E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PIRSF PIRSF003161 8 341 4.7E-112 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 Pfam PF14842 FliG N-terminal domain 13 114 2.3E-29 T 11-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 SUPERFAMILY SSF48029 125 334 8.89E-62 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 SUPERFAMILY SSF48029 5 109 2.88E-19 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 257 277 1.9E-58 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 14 30 1.9E-58 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 43 69 1.9E-58 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 204 229 1.9E-58 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 124 147 1.9E-58 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 235 255 1.9E-58 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 281 307 1.9E-58 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 Pfam PF14841 FliG middle domain 125 198 5.9E-28 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 Gene3D G3DSA:1.10.220.30 16 81 3.8E-12 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 Pfam PF01706 FliG C-terminal domain 228 333 6.1E-37 T 11-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 9 340 5.6E-135 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 Gene3D G3DSA:1.10.220.30 82 197 7.7E-31 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical WS_RS09395 e0a5333142cac6578a8c5faa62f5fb65 341 Gene3D G3DSA:1.10.220.30 204 338 3.5E-37 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical WS_RS07030 77076447504be5c28f0f5148d1573045 290 Gene3D G3DSA:3.90.226.10 182 269 4.8E-38 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS07030 77076447504be5c28f0f5148d1573045 290 Gene3D G3DSA:3.90.226.10 27 144 4.8E-38 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS07030 77076447504be5c28f0f5148d1573045 290 Pfam PF01343 Peptidase family S49 104 256 5.7E-44 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 WS_RS07030 77076447504be5c28f0f5148d1573045 290 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 50 254 1.0E-65 T 11-11-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 WS_RS07030 77076447504be5c28f0f5148d1573045 290 SUPERFAMILY SSF52096 181 240 4.97E-31 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS07030 77076447504be5c28f0f5148d1573045 290 SUPERFAMILY SSF52096 29 152 4.97E-31 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 2 321 37.049 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 Gene3D G3DSA:3.20.20.70 2 307 6.3E-72 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 SUPERFAMILY SSF102114 2 281 9.16E-68 T 11-11-2016 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 SMART SM00729 11 212 1.1E-10 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 Pfam PF13353 4Fe-4S single cluster domain 18 121 5.6E-10 T 11-11-2016 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 Pfam PF04055 Radical SAM superfamily 15 175 9.9E-27 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 321 2.5E-110 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS09435 4e2340d2d045538ed139a461ddf07794 321 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 303 9.5E-32 T 11-11-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS01625 175e525f7cc5e70c472b5c7246de90cf 79 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 8 52 3.7E-18 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type WS_RS01625 175e525f7cc5e70c472b5c7246de90cf 79 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 6 46 1.3E-15 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 SUPERFAMILY SSF55261 290 419 8.07E-34 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Gene3D G3DSA:3.30.930.10 134 277 5.9E-113 T 11-11-2016 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Gene3D G3DSA:3.30.930.10 414 579 5.9E-113 T 11-11-2016 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 SUPERFAMILY SSF50249 1 106 9.86E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 SUPERFAMILY SSF55681 112 293 1.88E-106 T 11-11-2016 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 SUPERFAMILY SSF55681 424 578 1.88E-106 T 11-11-2016 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 577 1.5E-242 T 11-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 512 526 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 468 484 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Gene3D G3DSA:2.40.50.140 2 108 1.1E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 3.0E-12 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 552 2.9E-106 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 557 35.254 T 11-11-2016 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Gene3D G3DSA:3.30.1360.30 278 413 5.9E-43 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 WS_RS08385 6a7f99f0bca9c118f1c50abb70c65635 584 Pfam PF02938 GAD domain 317 405 2.9E-22 T 11-11-2016 IPR029351 GAD domain Reactome: R-HSA-379726 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 Gene3D G3DSA:3.30.950.10 116 224 7.8E-33 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 267 7.9E-78 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 11-11-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 SUPERFAMILY SSF53790 2 223 5.89E-64 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 225 33.494 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 PIRSF PIRSF005917 1 271 8.1E-87 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 Gene3D G3DSA:3.40.1010.10 2 115 2.7E-13 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS02180 d66b4a8792cce8d4bc3e2edf3bcda25b 271 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 206 6.6E-25 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 WS_RS10305 a8e7d9e9f6fe90ed39995035f46ed38b 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 110 138 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 WS_RS10305 a8e7d9e9f6fe90ed39995035f46ed38b 191 SUPERFAMILY SSF51161 3 167 9.15E-46 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS10305 a8e7d9e9f6fe90ed39995035f46ed38b 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 51 79 3.8E-4 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS10305 a8e7d9e9f6fe90ed39995035f46ed38b 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 48 3.7E-10 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS10305 a8e7d9e9f6fe90ed39995035f46ed38b 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 135 4.1E-7 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS10305 a8e7d9e9f6fe90ed39995035f46ed38b 191 Gene3D G3DSA:2.160.10.10 3 156 4.9E-44 T 11-11-2016 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 448 9.9E-83 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 Gene3D G3DSA:3.40.50.720 206 374 4.5E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 PIRSF PIRSF000185 17 449 1.4E-108 T 11-11-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 11-11-2016 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 SUPERFAMILY SSF53223 2 193 4.8E-70 T 11-11-2016 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 Gene3D G3DSA:1.10.285.10 375 448 2.9E-25 T 11-11-2016 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 Gene3D G3DSA:1.10.285.10 3 64 2.6E-23 T 11-11-2016 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 Gene3D G3DSA:3.40.192.10 65 185 4.0E-59 T 11-11-2016 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 SUPERFAMILY SSF51735 199 449 5.07E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 7.6E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 7.6E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 7.6E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 7.6E-28 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 3.0E-49 T 11-11-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 WS_RS09045 545195b27f45147643e5ceb0f75363a3 449 SMART SM00839 201 448 3.1E-77 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 WS_RS06735 5d36bcb40f7b1a97e87058f3b8898063 79 Pfam PF04023 FeoA domain 1 71 2.5E-18 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 WS_RS06735 5d36bcb40f7b1a97e87058f3b8898063 79 SUPERFAMILY SSF50037 3 71 5.49E-16 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal WS_RS06735 5d36bcb40f7b1a97e87058f3b8898063 79 SMART SM00899 1 73 2.5E-20 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 129 211 5.6E-28 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 107 31.054 T 11-11-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 6 216 35.327 T 11-11-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 SUPERFAMILY SSF101386 127 215 5.45E-23 T 11-11-2016 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 103 1.1E-33 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 125 211 19.413 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 SUPERFAMILY SSF141734 5 111 2.62E-46 T 11-11-2016 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 106 5.0E-26 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 WS_RS00430 7d5199936f1ffc6fcb178e22cd564326 229 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 132 214 1.7E-15 T 11-11-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 WS_RS01025 274e696cf6ae9c9025b56a42e0ada897 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 26 367 1.2E-85 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS01025 274e696cf6ae9c9025b56a42e0ada897 375 Gene3D G3DSA:3.90.1150.10 252 370 2.7E-32 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS01025 274e696cf6ae9c9025b56a42e0ada897 375 SUPERFAMILY SSF53383 4 368 4.9E-83 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS01025 274e696cf6ae9c9025b56a42e0ada897 375 Gene3D G3DSA:3.40.640.10 4 250 2.5E-53 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS01025 274e696cf6ae9c9025b56a42e0ada897 375 PIRSF PIRSF000390 1 373 2.2E-73 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.0E-19 T 11-11-2016 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 260 5.0E-19 T 11-11-2016 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 5.0E-19 T 11-11-2016 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 5.0E-19 T 11-11-2016 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 9 290 2.5E-47 T 11-11-2016 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 Gene3D G3DSA:3.50.50.60 4 169 3.9E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 Gene3D G3DSA:3.50.50.60 170 240 1.3E-13 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 131 2.9E-17 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 158 182 2.9E-17 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 2.9E-17 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.9E-17 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 SUPERFAMILY SSF51905 5 317 9.07E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS01630 b243fe14455c28b06b2f9419fc30a435 319 Gene3D G3DSA:3.50.50.60 241 316 4.2E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 683 937 2.5E-68 T 11-11-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 Gene3D G3DSA:3.40.50.300 236 403 1.6E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 9 680 1.3E-153 T 11-11-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 SUPERFAMILY SSF52540 207 402 4.89E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 Pfam PF04851 Type III restriction enzyme, res subunit 237 399 3.6E-37 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 186 2.1E-41 T 11-11-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 SUPERFAMILY SSF52540 257 310 2.57E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 SUPERFAMILY SSF52540 578 678 2.57E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05420 e5ae96518c3f5c5de5840266a09dc67e 939 SMART SM00487 234 428 9.5E-18 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 Gene3D G3DSA:1.10.287.130 166 212 7.7E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 SUPERFAMILY SSF55874 241 384 7.33E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 SMART SM00387 277 386 2.5E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 SMART SM00388 172 234 1.5E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 SUPERFAMILY SSF47384 158 230 4.12E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 364 2.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 331 2.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 2.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 383 2.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 385 3.2E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00065 c9c107e64cf7236ac5303a6637f2a28b 391 Gene3D G3DSA:3.30.565.10 242 385 3.8E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04020 eb45c3208fe176a75921eabfde29bcec 263 Gene3D G3DSA:3.40.140.10 125 261 3.3E-46 T 11-11-2016 WS_RS04020 eb45c3208fe176a75921eabfde29bcec 263 PIRSF PIRSF015626 2 262 3.7E-77 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS04020 eb45c3208fe176a75921eabfde29bcec 263 SUPERFAMILY SSF53927 5 259 6.32E-71 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 WS_RS04020 eb45c3208fe176a75921eabfde29bcec 263 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 2 259 28.691 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS04020 eb45c3208fe176a75921eabfde29bcec 263 Pfam PF02634 FdhD/NarQ family 27 258 8.9E-71 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS04020 eb45c3208fe176a75921eabfde29bcec 263 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 23 259 2.7E-55 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS04020 eb45c3208fe176a75921eabfde29bcec 263 Gene3D G3DSA:3.10.20.10 28 109 4.8E-17 T 11-11-2016 WS_RS10335 e389536524895dc75b518f787df016f2 357 SUPERFAMILY SSF102114 13 295 8.11E-38 T 11-11-2016 WS_RS10335 e389536524895dc75b518f787df016f2 357 SMART SM00729 16 228 0.0025 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS10335 e389536524895dc75b518f787df016f2 357 Gene3D G3DSA:3.20.20.70 10 297 4.8E-34 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS10335 e389536524895dc75b518f787df016f2 357 Pfam PF04055 Radical SAM superfamily 21 172 4.4E-12 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 SMART SM00876 184 274 2.5E-25 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 SMART SM00729 7 215 8.1E-30 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 Pfam PF04055 Radical SAM superfamily 13 173 8.8E-20 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 TIGRFAM TIGR00433 bioB: biotin synthase 3 273 6.1E-89 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 Gene3D G3DSA:3.20.20.70 3 275 1.4E-72 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 PIRSF PIRSF001619 1 279 1.5E-83 T 11-11-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 184 272 1.5E-12 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 SUPERFAMILY SSF102114 3 274 1.31E-61 T 11-11-2016 WS_RS07135 8805c779f6778103d380c1ca08ac430b 279 Hamap MF_01694 Biotin synthase [bioB]. 2 275 33.498 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 WS_RS03785 a75624b5737ca315c3a56da8f86bd461 84 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 65 8.4E-19 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 WS_RS03785 a75624b5737ca315c3a56da8f86bd461 84 Gene3D G3DSA:3.30.70.330 2 77 1.5E-25 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 WS_RS03785 a75624b5737ca315c3a56da8f86bd461 84 SUPERFAMILY SSF54928 3 80 5.7E-26 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 WS_RS03785 a75624b5737ca315c3a56da8f86bd461 84 SMART SM00360 1 67 1.5E-16 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 490 518 - T 11-11-2016 IPR001587 Ribonuclease J, conserved site WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 Pfam PF00753 Metallo-beta-lactamase superfamily 142 292 5.2E-11 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 SMART SM00849 145 341 2.2E-21 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 Hamap MF_01491 Ribonuclease J [rnj]. 128 681 42.792 T 11-11-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 133 678 8.1E-199 T 11-11-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 Gene3D G3DSA:3.60.15.10 130 381 7.3E-75 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 SUPERFAMILY SSF56281 134 549 1.14E-88 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS00315 e4c6ceb76fa7195e2d4d1ed3407c8ab5 681 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 481 531 4.1E-9 T 11-11-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain WS_RS08460 2d5bd870aefa14a199ea3d91cdbedf6b 277 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 198 263 9.5E-13 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain WS_RS08460 2d5bd870aefa14a199ea3d91cdbedf6b 277 Pfam PF00460 Flagella basal body rod protein 17 35 1.4E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 WS_RS08460 2d5bd870aefa14a199ea3d91cdbedf6b 277 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site WS_RS08460 2d5bd870aefa14a199ea3d91cdbedf6b 277 SUPERFAMILY SSF117143 97 233 1.03E-17 T 11-11-2016 WS_RS08460 2d5bd870aefa14a199ea3d91cdbedf6b 277 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 147 5.4E-30 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 Gene3D G3DSA:3.90.1170.20 1 120 1.9E-27 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 PIRSF PIRSF006250 1 272 3.3E-60 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 98 267 4.7E-33 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 SUPERFAMILY SSF54675 1 97 5.1E-22 T 11-11-2016 WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 TIGRFAM TIGR01334 modD: modD protein 1 268 3.3E-71 T 11-11-2016 IPR006242 Putative pyrophosphorylase ModD GO:0016763 WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 Gene3D G3DSA:3.20.20.70 121 259 4.5E-35 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 SUPERFAMILY SSF51690 98 268 5.1E-40 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 WS_RS08490 0a374a5efac3754361e5c03c99e06f01 275 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 11 96 8.3E-20 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 WS_RS00560 4b7fb0d4c3e76f6a0ad7c834d79436f1 223 SMART SM00448 1 111 1.3E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00560 4b7fb0d4c3e76f6a0ad7c834d79436f1 223 SMART SM00862 141 211 3.1E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS00560 4b7fb0d4c3e76f6a0ad7c834d79436f1 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 5.6E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS00560 4b7fb0d4c3e76f6a0ad7c834d79436f1 223 Gene3D G3DSA:1.10.10.10 130 211 3.3E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS00560 4b7fb0d4c3e76f6a0ad7c834d79436f1 223 SUPERFAMILY SSF52172 1 166 9.39E-29 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS00560 4b7fb0d4c3e76f6a0ad7c834d79436f1 223 Pfam PF00072 Response regulator receiver domain 3 108 4.0E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS00560 4b7fb0d4c3e76f6a0ad7c834d79436f1 223 Gene3D G3DSA:3.40.50.2300 1 116 4.2E-27 T 11-11-2016 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 58 82 7.2E-29 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 214 227 7.2E-29 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 134 153 7.2E-29 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 183 205 7.2E-29 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 19 42 7.2E-29 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 Pfam PF01292 Prokaryotic cytochrome b561 17 222 1.3E-27 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 SUPERFAMILY SSF81342 15 226 6.28E-37 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 183 200 - T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 16 228 1.4E-88 T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 Gene3D G3DSA:1.20.950.20 15 229 4.0E-44 T 11-11-2016 WS_RS07930 7e54032d8d7a838a81df87f5c9483781 230 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 22 39 - T 11-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Gene3D G3DSA:1.10.8.10 209 238 1.3E-15 T 11-11-2016 WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Gene3D G3DSA:1.10.8.10 108 173 1.3E-15 T 11-11-2016 WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 1 440 2.3E-189 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 332 402 9.3E-6 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 SMART SM01086 332 426 6.2E-20 T 11-11-2016 IPR019489 Clp ATPase, C-terminal WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 49 112 2.3E-7 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 196 325 4.8E-39 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 SUPERFAMILY SSF52540 1 435 3.55E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Gene3D G3DSA:3.40.50.300 2 107 1.6E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Gene3D G3DSA:3.40.50.300 241 328 1.6E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 SMART SM00382 46 329 2.3E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06195 92f3f5ebfe216f870fbeae105dc19660 440 Gene3D G3DSA:1.10.8.60 331 440 1.6E-33 T 11-11-2016 WS_RS10705 e0726c3f0ba5128ea2a9fc4757756e6d 312 Gene3D G3DSA:1.10.10.60 205 262 2.2E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS10705 e0726c3f0ba5128ea2a9fc4757756e6d 312 Pfam PF12833 Helix-turn-helix domain 230 308 7.0E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS10705 e0726c3f0ba5128ea2a9fc4757756e6d 312 Gene3D G3DSA:1.10.10.60 263 309 2.4E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS10705 e0726c3f0ba5128ea2a9fc4757756e6d 312 SMART SM00342 224 307 6.3E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS10705 e0726c3f0ba5128ea2a9fc4757756e6d 312 SUPERFAMILY SSF46689 260 310 4.93E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS10395 838d0c5e26c164837becbb9c54fd8938 390 SUPERFAMILY SSF53383 8 382 3.29E-106 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS10395 838d0c5e26c164837becbb9c54fd8938 390 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 8 389 2.9E-239 T 11-11-2016 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 WS_RS10395 838d0c5e26c164837becbb9c54fd8938 390 Pfam PF00266 Aminotransferase class-V 8 371 4.7E-83 T 11-11-2016 IPR000192 Aminotransferase class V domain WS_RS10395 838d0c5e26c164837becbb9c54fd8938 390 PIRSF PIRSF005572 5 387 2.0E-127 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 WS_RS10395 838d0c5e26c164837becbb9c54fd8938 390 Gene3D G3DSA:3.40.640.10 20 253 1.9E-86 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS10395 838d0c5e26c164837becbb9c54fd8938 390 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site WS_RS10395 838d0c5e26c164837becbb9c54fd8938 390 Gene3D G3DSA:3.90.1150.10 254 378 3.9E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS06975 e7df3737af38d2915e80a805ba7b1642 189 Gene3D G3DSA:3.40.50.1820 3 174 5.1E-11 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS06975 e7df3737af38d2915e80a805ba7b1642 189 SUPERFAMILY SSF53474 4 183 5.75E-13 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS06975 e7df3737af38d2915e80a805ba7b1642 189 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 184 1.8E-44 T 11-11-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA WS_RS05530 b6e0a70653ab153a346f4ac021414717 181 Pfam PF01810 LysE type translocator 2 151 2.7E-13 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 WS_RS05020 5d8e92d75c966e5c43160a9b9dbd9c42 334 SUPERFAMILY SSF51679 1 334 6.41E-67 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 WS_RS05020 5d8e92d75c966e5c43160a9b9dbd9c42 334 Pfam PF00296 Luciferase-like monooxygenase 1 300 5.6E-57 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 WS_RS05020 5d8e92d75c966e5c43160a9b9dbd9c42 334 Gene3D G3DSA:3.20.20.30 1 334 3.1E-69 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Gene3D G3DSA:3.90.740.10 222 430 3.1E-51 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 SUPERFAMILY SSF50677 225 421 8.79E-49 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 424 624 6.7E-23 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 SUPERFAMILY SSF52374 422 634 2.09E-144 T 11-11-2016 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 SUPERFAMILY SSF52374 3 225 2.09E-144 T 11-11-2016 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Gene3D G3DSA:1.10.730.10 614 739 2.5E-25 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 5.5E-46 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 PRINTS PR00985 Leucyl-tRNA synthetase signature 493 511 5.5E-46 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 PRINTS PR00985 Leucyl-tRNA synthetase signature 534 556 5.5E-46 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 5.5E-46 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 5.5E-46 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 5.5E-46 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 PRINTS PR00985 Leucyl-tRNA synthetase signature 567 577 5.5E-46 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 SUPERFAMILY SSF47323 629 818 7.85E-19 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 409 1.3E-62 T 11-11-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 817 21.425 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Gene3D G3DSA:3.40.50.620 431 613 4.0E-147 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Gene3D G3DSA:3.40.50.620 2 221 4.0E-147 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 Pfam PF09334 tRNA synthetases class I (M) 34 180 4.5E-20 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS05960 87627d067031fdda4cb4467a661a40cf 819 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 581 1.1E-259 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 106 118 2.1E-18 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 46 55 2.1E-18 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 132 2.1E-18 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 236 246 2.1E-18 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 146 158 2.1E-18 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 168 180 2.1E-18 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 Pfam PF00813 FliP family 50 242 1.6E-75 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 175 195 3.9E-63 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 87 3.9E-63 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 106 3.9E-63 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 48 67 3.9E-63 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 196 217 3.9E-63 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 220 245 3.9E-63 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 WS_RS09870 226d8f788f169d35cd276d0d039068e5 247 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 50 246 2.4E-80 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 WS_RS00975 06a15d3183f5ca25440aab8a486e4a7b 215 SMART SM00382 27 215 2.0E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00975 06a15d3183f5ca25440aab8a486e4a7b 215 SUPERFAMILY SSF52540 15 211 1.3E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00975 06a15d3183f5ca25440aab8a486e4a7b 215 Pfam PF00005 ABC transporter 20 160 2.8E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS00975 06a15d3183f5ca25440aab8a486e4a7b 215 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS00975 06a15d3183f5ca25440aab8a486e4a7b 215 Gene3D G3DSA:3.40.50.300 2 210 5.9E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07875 dbb0848ae790fc47cd10dcbd1fa6f0e8 169 SMART SM00091 9 75 0.0017 T 11-11-2016 IPR000014 PAS domain WS_RS07875 dbb0848ae790fc47cd10dcbd1fa6f0e8 169 SUPERFAMILY SSF55785 18 116 1.01E-24 T 11-11-2016 IPR000014 PAS domain WS_RS07875 dbb0848ae790fc47cd10dcbd1fa6f0e8 169 Gene3D G3DSA:3.30.450.20 20 114 2.3E-20 T 11-11-2016 WS_RS07875 dbb0848ae790fc47cd10dcbd1fa6f0e8 169 Pfam PF08447 PAS fold 32 113 1.7E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS07875 dbb0848ae790fc47cd10dcbd1fa6f0e8 169 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 110 2.1E-15 T 11-11-2016 IPR000014 PAS domain WS_RS09765 8d5682df29a53672f2ef341be23b48e9 276 Pfam PF03330 Lytic transglycolase 75 162 5.6E-26 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain WS_RS09765 8d5682df29a53672f2ef341be23b48e9 276 SUPERFAMILY SSF110997 203 264 9.94E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 WS_RS09765 8d5682df29a53672f2ef341be23b48e9 276 Pfam PF05036 Sporulation related domain 202 266 1.6E-12 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 WS_RS09765 8d5682df29a53672f2ef341be23b48e9 276 Gene3D G3DSA:3.30.70.1070 202 260 1.1E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 WS_RS09765 8d5682df29a53672f2ef341be23b48e9 276 Gene3D G3DSA:2.40.40.10 112 163 5.7E-6 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain WS_RS09765 8d5682df29a53672f2ef341be23b48e9 276 SUPERFAMILY SSF50685 75 161 2.55E-10 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain WS_RS09765 8d5682df29a53672f2ef341be23b48e9 276 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 76 223 8.2E-57 T 11-11-2016 IPR012997 Rare lipoprotein A WS_RS10760 7a91279617cbec8339cd480b8cf12b21 798 Pfam PF04773 FecR protein 56 138 2.5E-12 T 11-11-2016 IPR006860 FecR protein WS_RS10760 7a91279617cbec8339cd480b8cf12b21 798 SUPERFAMILY SSF56925 669 779 8.63E-5 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 WS_RS09110 036bc394ac2e27c2c47edefe43f28953 396 SUPERFAMILY SSF52374 144 356 1.13E-52 T 11-11-2016 WS_RS09110 036bc394ac2e27c2c47edefe43f28953 396 Pfam PF01747 ATP-sulfurylase 147 349 1.2E-44 T 11-11-2016 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 WS_RS09110 036bc394ac2e27c2c47edefe43f28953 396 SUPERFAMILY SSF88697 2 142 2.49E-25 T 11-11-2016 IPR015947 PUA-like domain WS_RS09110 036bc394ac2e27c2c47edefe43f28953 396 Pfam PF14306 PUA-like domain 3 134 3.1E-11 T 11-11-2016 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 WS_RS09110 036bc394ac2e27c2c47edefe43f28953 396 Gene3D G3DSA:3.40.50.620 150 360 4.4E-45 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS09110 036bc394ac2e27c2c47edefe43f28953 396 Gene3D G3DSA:3.10.400.10 2 137 1.9E-17 T 11-11-2016 WS_RS06770 4395a70b9ac25bf8861c5e589ae01727 320 Pfam PF16220 Domain of unknown function (DUF4880) 7 47 1.2E-10 T 11-11-2016 IPR032623 FecR, N-terminal WS_RS06770 4395a70b9ac25bf8861c5e589ae01727 320 Pfam PF04773 FecR protein 107 198 1.8E-20 T 11-11-2016 IPR006860 FecR protein WS_RS06770 4395a70b9ac25bf8861c5e589ae01727 320 PIRSF PIRSF018266 1 316 1.8E-71 T 11-11-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component WS_RS09495 f86fa46e29847a488d0c37059ec6f73d 142 SUPERFAMILY SSF74942 82 141 1.31E-7 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal WS_RS09495 f86fa46e29847a488d0c37059ec6f73d 142 SUPERFAMILY SSF75420 7 81 3.79E-21 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal WS_RS09495 f86fa46e29847a488d0c37059ec6f73d 142 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 4 142 21.176 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 WS_RS09495 f86fa46e29847a488d0c37059ec6f73d 142 Pfam PF02576 Putative ribosome maturation factor RimP 10 137 2.6E-38 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 WS_RS09495 f86fa46e29847a488d0c37059ec6f73d 142 Gene3D G3DSA:3.30.300.70 5 78 1.7E-25 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal WS_RS02690 992b1a5f559bd1d2984c5c76d788cb62 80 Gene3D G3DSA:3.30.300.120 3 64 2.1E-7 T 11-11-2016 WS_RS02690 992b1a5f559bd1d2984c5c76d788cb62 80 Pfam PF13083 KH domain 3 76 1.4E-18 T 11-11-2016 WS_RS09350 424c132fbcd25db1634b8475ae77f794 331 Pfam PF02504 Fatty acid synthesis protein 2 317 1.9E-115 T 11-11-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 WS_RS09350 424c132fbcd25db1634b8475ae77f794 331 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 326 1.2E-122 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 WS_RS09350 424c132fbcd25db1634b8475ae77f794 331 PIRSF PIRSF002465 1 331 2.3E-125 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 WS_RS09350 424c132fbcd25db1634b8475ae77f794 331 SUPERFAMILY SSF53659 1 327 8.22E-102 T 11-11-2016 WS_RS09350 424c132fbcd25db1634b8475ae77f794 331 Gene3D G3DSA:3.40.718.10 1 326 1.1E-126 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS09350 424c132fbcd25db1634b8475ae77f794 331 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 331 135.442 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 WS_RS02700 8488228c277984fc52ffc02f4d191dec 237 SUPERFAMILY SSF75217 2 234 3.07E-78 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases WS_RS02700 8488228c277984fc52ffc02f4d191dec 237 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.1E-47 T 11-11-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 WS_RS02700 8488228c277984fc52ffc02f4d191dec 237 Gene3D G3DSA:1.10.1270.20 161 234 9.7E-19 T 11-11-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 WS_RS02700 8488228c277984fc52ffc02f4d191dec 237 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 237 76.664 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 WS_RS02700 8488228c277984fc52ffc02f4d191dec 237 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 2.0E-82 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 WS_RS02700 8488228c277984fc52ffc02f4d191dec 237 Gene3D G3DSA:3.40.1280.10 2 160 3.5E-55 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal WS_RS02700 8488228c277984fc52ffc02f4d191dec 237 PIRSF PIRSF000386 1 237 1.2E-83 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 WS_RS02755 f73b21827ed62a903c04639b3bfc719a 785 Gene3D G3DSA:3.40.50.300 417 510 9.7E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02755 f73b21827ed62a903c04639b3bfc719a 785 Gene3D G3DSA:3.40.50.300 256 331 9.7E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02755 f73b21827ed62a903c04639b3bfc719a 785 SUPERFAMILY SSF52980 549 719 3.54E-5 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 WS_RS02755 f73b21827ed62a903c04639b3bfc719a 785 SUPERFAMILY SSF52540 256 543 4.46E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02755 f73b21827ed62a903c04639b3bfc719a 785 Pfam PF12705 PD-(D/E)XK nuclease superfamily 547 782 7.6E-33 T 11-11-2016 WS_RS04375 f7801ca18f86edb89e5dea52a3d92f1e 296 SUPERFAMILY SSF50978 22 294 4.45E-23 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 WS_RS04375 f7801ca18f86edb89e5dea52a3d92f1e 296 Gene3D G3DSA:2.130.10.10 24 294 5.1E-21 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS04375 f7801ca18f86edb89e5dea52a3d92f1e 296 SMART SM00320 258 294 220.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS04375 f7801ca18f86edb89e5dea52a3d92f1e 296 SMART SM00320 53 91 0.037 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 Gene3D G3DSA:3.30.565.10 194 350 1.7E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 294 1.5E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 308 1.5E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.5E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 SUPERFAMILY SSF55874 191 349 3.41E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 SMART SM00387 235 351 1.8E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 Gene3D G3DSA:1.10.287.130 120 173 5.3E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 SUPERFAMILY SSF47384 119 194 2.94E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS09640 5513647c0e8608d59d30b1575588abe6 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 239 350 9.4E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 11-11-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 Gene3D G3DSA:3.30.70.141 1 135 2.9E-61 T 11-11-2016 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 35.921 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 SUPERFAMILY SSF54919 1 136 2.62E-59 T 11-11-2016 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.4E-43 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.4E-43 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.4E-43 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.4E-43 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.4E-43 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 SMART SM00562 1 137 9.8E-86 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS09365 b72caf41a23f16b1ed69609cc8028ca9 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 8.0E-57 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 WS_RS10665 56a997f9ec624aaec33c0e136e2bff04 795 Gene3D G3DSA:3.40.50.300 314 415 2.1E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10665 56a997f9ec624aaec33c0e136e2bff04 795 Gene3D G3DSA:3.40.50.300 187 229 2.1E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10665 56a997f9ec624aaec33c0e136e2bff04 795 Pfam PF00350 Dynamin family 197 395 6.0E-34 T 11-11-2016 IPR022812 Dynamin superfamily WS_RS10665 56a997f9ec624aaec33c0e136e2bff04 795 SUPERFAMILY SSF52540 309 414 1.08E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10665 56a997f9ec624aaec33c0e136e2bff04 795 SUPERFAMILY SSF52540 181 278 1.08E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09275 2d9ab0feb3d308e896893f9a107a82f7 217 Pfam PF13525 Outer membrane lipoprotein 32 186 9.9E-18 T 11-11-2016 WS_RS09275 2d9ab0feb3d308e896893f9a107a82f7 217 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 3 217 25.335 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD WS_RS09275 2d9ab0feb3d308e896893f9a107a82f7 217 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 7 190 1.1E-23 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD WS_RS09275 2d9ab0feb3d308e896893f9a107a82f7 217 Gene3D G3DSA:1.25.40.10 61 188 7.7E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS01975 face22c0d1cbba99c9d8b1207d1e8352 139 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 1 134 33.207 T 11-11-2016 IPR011194 Uncharacterised protein family UPF0306 WS_RS01975 face22c0d1cbba99c9d8b1207d1e8352 139 SUPERFAMILY SSF50475 1 118 6.68E-17 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 WS_RS01975 face22c0d1cbba99c9d8b1207d1e8352 139 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 66 1.6E-4 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 WS_RS01975 face22c0d1cbba99c9d8b1207d1e8352 139 Gene3D G3DSA:2.30.110.10 7 127 7.2E-7 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 WS_RS01975 face22c0d1cbba99c9d8b1207d1e8352 139 PIRSF PIRSF009554 1 139 1.9E-49 T 11-11-2016 IPR011194 Uncharacterised protein family UPF0306 WS_RS07850 06849d821d2640298f3490590caf4eaf 145 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 18 38 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site WS_RS07850 06849d821d2640298f3490590caf4eaf 145 Pfam PF00460 Flagella basal body rod protein 18 39 2.2E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 WS_RS07850 06849d821d2640298f3490590caf4eaf 145 PIRSF PIRSF002889 3 142 1.1E-38 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 WS_RS07850 06849d821d2640298f3490590caf4eaf 145 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 9 139 3.0E-35 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 WS_RS09300 f369b45e9e24ee5375e9fce83abcb9c5 219 SUPERFAMILY SSF56112 27 128 1.6E-7 T 11-11-2016 IPR011009 Protein kinase-like domain WS_RS07475 8c72a404d90bfd0968be6b6f887084fb 300 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 66 80 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 WS_RS07475 8c72a404d90bfd0968be6b6f887084fb 300 SUPERFAMILY SSF48576 29 288 1.1E-66 T 11-11-2016 IPR008949 Isoprenoid synthase domain WS_RS07475 8c72a404d90bfd0968be6b6f887084fb 300 Gene3D G3DSA:1.10.600.10 4 299 6.3E-83 T 11-11-2016 IPR008949 Isoprenoid synthase domain WS_RS07475 8c72a404d90bfd0968be6b6f887084fb 300 Pfam PF00348 Polyprenyl synthetase 29 243 9.5E-54 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 WS_RS07475 8c72a404d90bfd0968be6b6f887084fb 300 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 184 196 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 WS_RS08665 776d52820883feee777079af69514e34 216 Gene3D G3DSA:3.30.70.20 7 61 2.6E-11 T 11-11-2016 WS_RS08665 776d52820883feee777079af69514e34 216 Gene3D G3DSA:3.30.70.20 146 169 2.6E-11 T 11-11-2016 WS_RS08665 776d52820883feee777079af69514e34 216 Gene3D G3DSA:3.30.70.20 62 93 9.6E-15 T 11-11-2016 WS_RS08665 776d52820883feee777079af69514e34 216 SUPERFAMILY SSF54862 4 158 8.79E-33 T 11-11-2016 WS_RS08665 776d52820883feee777079af69514e34 216 Gene3D G3DSA:3.30.70.20 94 145 3.0E-12 T 11-11-2016 WS_RS08665 776d52820883feee777079af69514e34 216 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS08665 776d52820883feee777079af69514e34 216 Pfam PF13187 4Fe-4S dicluster domain 85 153 2.6E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS01550 df5c5d92355dafa66681cfaf15d07ba7 205 Gene3D G3DSA:3.40.50.2020 8 203 1.4E-41 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS01550 df5c5d92355dafa66681cfaf15d07ba7 205 Pfam PF00156 Phosphoribosyl transferase domain 37 149 7.6E-12 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 WS_RS01550 df5c5d92355dafa66681cfaf15d07ba7 205 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 205 25.219 T 11-11-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS01550 df5c5d92355dafa66681cfaf15d07ba7 205 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 5 203 1.8E-72 T 11-11-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686 WS_RS01550 df5c5d92355dafa66681cfaf15d07ba7 205 SUPERFAMILY SSF53271 10 192 1.39E-36 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 Pfam PF01584 CheW-like domain 20 173 6.6E-26 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 SUPERFAMILY SSF50341 16 175 2.49E-20 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 Gene3D G3DSA:3.40.50.2300 195 317 9.8E-24 T 11-11-2016 WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 Pfam PF00072 Response regulator receiver domain 198 308 1.8E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 PIRSF PIRSF002867 1 318 2.7E-98 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 SMART SM00448 196 313 1.6E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 SMART SM00260 16 171 1.9E-27 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS01275 8645a97e3cf912ca76793621fa02929b 318 SUPERFAMILY SSF52172 196 317 1.38E-20 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 Gene3D G3DSA:3.30.70.20 68 108 1.8E-10 T 11-11-2016 WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 Gene3D G3DSA:3.30.70.20 152 207 5.8E-11 T 11-11-2016 WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 SUPERFAMILY SSF54862 58 211 1.5E-26 T 11-11-2016 WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 9 227 5.3E-68 T 11-11-2016 IPR004494 MauM/NapG ferredoxin-type protein WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 Gene3D G3DSA:3.30.70.20 109 151 6.5E-8 T 11-11-2016 WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 Gene3D G3DSA:1.10.1060.10 40 67 1.3E-7 T 11-11-2016 WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 Pfam PF12838 4Fe-4S dicluster domain 153 206 2.6E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS05630 100411baaa89e6c35b9e499ccd99b35b 266 Pfam PF12838 4Fe-4S dicluster domain 59 114 1.4E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS08165 793068a724c8448e37deb929d98478bb 381 Gene3D G3DSA:3.20.20.20 117 378 3.8E-91 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS08165 793068a724c8448e37deb929d98478bb 381 PIRSF PIRSF000501 1 381 4.1E-200 T 11-11-2016 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 WS_RS08165 793068a724c8448e37deb929d98478bb 381 Pfam PF00809 Pterin binding enzyme 121 361 3.5E-71 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS08165 793068a724c8448e37deb929d98478bb 381 SUPERFAMILY SSF51717 111 377 3.66E-85 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS08165 793068a724c8448e37deb929d98478bb 381 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 119 375 3.8E-90 T 11-11-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 WS_RS08165 793068a724c8448e37deb929d98478bb 381 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 153 166 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 Pfam PF01580 FtsK/SpoIIIE family 606 655 3.7E-14 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 Pfam PF01580 FtsK/SpoIIIE family 465 601 9.1E-49 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 Pfam PF09397 Ftsk gamma domain 762 820 1.8E-23 T 11-11-2016 IPR018541 FtsK gamma domain WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 SMART SM00382 500 676 2.6E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 143 2.2E-8 T 11-11-2016 IPR025199 DNA translocase FtsK, 4TM region WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 Gene3D G3DSA:3.40.50.300 439 720 3.2E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 SUPERFAMILY SSF46785 759 820 1.04E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 SMART SM00843 759 822 1.4E-28 T 11-11-2016 IPR018541 FtsK gamma domain WS_RS00460 c9944fc33ac3a0c0b486400706650bee 822 SUPERFAMILY SSF52540 438 727 8.76E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07170 cdc8c312233ca95999926736c264194e 587 SMART SM00283 362 571 2.0E-8 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS07170 cdc8c312233ca95999926736c264194e 587 SMART SM00304 318 372 3.5E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS07170 cdc8c312233ca95999926736c264194e 587 Pfam PF00672 HAMP domain 299 367 3.7E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS07170 cdc8c312233ca95999926736c264194e 587 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 449 580 3.7E-33 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS07170 cdc8c312233ca95999926736c264194e 587 SUPERFAMILY SSF58104 340 580 1.24E-50 T 11-11-2016 WS_RS07170 cdc8c312233ca95999926736c264194e 587 Gene3D G3DSA:1.10.287.950 406 579 3.2E-42 T 11-11-2016 WS_RS07170 cdc8c312233ca95999926736c264194e 587 SUPERFAMILY SSF103190 55 179 4.71E-11 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS07170 cdc8c312233ca95999926736c264194e 587 Pfam PF14827 Double sensory domain of two-component sensor kinase 49 277 2.7E-27 T 11-11-2016 IPR029150 Double Cache domain 3 WS_RS07765 311d42b2505914724739c70f947b0e4c 155 SUPERFAMILY SSF55826 5 155 1.44E-39 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 WS_RS07765 311d42b2505914724739c70f947b0e4c 155 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 1.0E-23 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 WS_RS07765 311d42b2505914724739c70f947b0e4c 155 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 154 1.8E-51 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC WS_RS07765 311d42b2505914724739c70f947b0e4c 155 PIRSF PIRSF006181 1 155 2.3E-56 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC WS_RS07765 311d42b2505914724739c70f947b0e4c 155 Gene3D G3DSA:3.90.960.10 3 155 2.4E-51 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 SUPERFAMILY SSF56420 1 167 2.49E-57 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 Pfam PF01327 Polypeptide deformylase 1 154 3.2E-50 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 Hamap MF_00163 Peptide deformylase [def]. 1 165 28.343 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 PIRSF PIRSF004749 1 170 1.1E-52 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 Gene3D G3DSA:3.90.45.10 2 167 2.0E-60 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 PRINTS PR01576 Peptide deformylase signature 92 103 6.1E-35 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 PRINTS PR01576 Peptide deformylase signature 104 122 6.1E-35 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 PRINTS PR01576 Peptide deformylase signature 31 60 6.1E-35 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 PRINTS PR01576 Peptide deformylase signature 123 152 6.1E-35 T 11-11-2016 IPR023635 Peptide deformylase WS_RS10420 26e2be7802d85ce0dda6119459c00d59 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 2 163 2.4E-52 T 11-11-2016 IPR023635 Peptide deformylase WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 186 26.955 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 Pfam PF07499 RuvA, C-terminal domain 144 185 1.7E-9 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 Pfam PF01330 RuvA N terminal domain 2 60 6.9E-15 T 11-11-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 Gene3D G3DSA:1.10.150.20 65 128 6.7E-26 T 11-11-2016 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 185 1.2E-47 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 Pfam PF14520 Helix-hairpin-helix domain 70 126 2.1E-17 T 11-11-2016 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 SMART SM00278 71 90 0.43 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 SMART SM00278 106 125 0.09 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 SUPERFAMILY SSF50249 2 61 2.97E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 SUPERFAMILY SSF47781 64 128 2.97E-19 T 11-11-2016 IPR010994 RuvA domain 2-like WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 Gene3D G3DSA:2.40.50.140 2 63 5.6E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 Gene3D G3DSA:1.10.8.10 144 185 3.0E-7 T 11-11-2016 WS_RS02155 84ce79004e00e7519e9d69b9fcb06d12 189 SUPERFAMILY SSF46929 143 185 2.49E-5 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 WS_RS00830 ef418405387336bad48f528f5a05773d 387 Gene3D G3DSA:2.40.37.10 203 380 2.7E-41 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS00830 ef418405387336bad48f528f5a05773d 387 PIRSF PIRSF038941 9 387 8.9E-177 T 11-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 WS_RS00830 ef418405387336bad48f528f5a05773d 387 SUPERFAMILY SSF50621 224 376 1.63E-33 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 WS_RS00830 ef418405387336bad48f528f5a05773d 387 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 15 386 4.7E-169 T 11-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 WS_RS00830 ef418405387336bad48f528f5a05773d 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 268 360 7.4E-12 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 WS_RS00830 ef418405387336bad48f528f5a05773d 387 SUPERFAMILY SSF51419 24 258 1.89E-41 T 11-11-2016 IPR029066 PLP-binding barrel WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 304 79.748 T 11-11-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 2.3E-50 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 Gene3D G3DSA:3.40.50.1370 2 137 2.0E-55 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 1.5E-27 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 1.5E-27 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 1.5E-27 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 1.5E-27 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 Gene3D G3DSA:3.40.50.1370 138 290 7.5E-64 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 301 5.5E-58 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 302 2.7E-122 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 4.8E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 4.8E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 4.8E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 4.8E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 4.8E-31 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS08250 53dbc060ab9971ae3eae5165c4a5a03e 307 SUPERFAMILY SSF53671 2 303 9.43E-104 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 5 307 8.0E-122 T 11-11-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 Gene3D G3DSA:3.20.20.70 1 306 2.0E-105 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 306 1.4E-97 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 SUPERFAMILY SSF51569 1 306 3.52E-101 T 11-11-2016 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 2 307 5.7E-106 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 84 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 WS_RS06130 0ebcb2dc2e688caf39cb177f34b608ab 307 PIRSF PIRSF001359 1 307 4.5E-114 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 WS_RS02995 3340b3eed46153eddd6f1b47e58eaebc 190 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 160 5.1E-35 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 WS_RS02995 3340b3eed46153eddd6f1b47e58eaebc 190 Pfam PF02223 Thymidylate kinase 5 182 9.7E-31 T 11-11-2016 WS_RS02995 3340b3eed46153eddd6f1b47e58eaebc 190 Hamap MF_00165 Thymidylate kinase [tmk]. 1 190 19.792 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 WS_RS02995 3340b3eed46153eddd6f1b47e58eaebc 190 Gene3D G3DSA:3.40.50.300 1 183 4.9E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02995 3340b3eed46153eddd6f1b47e58eaebc 190 SUPERFAMILY SSF52540 1 182 4.93E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 30.488 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 SUPERFAMILY SSF50104 2 117 1.4E-40 T 11-11-2016 IPR008991 Translation protein SH3-like domain WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 1.2E-45 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 Pfam PF01245 Ribosomal protein L19 5 115 1.1E-43 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 11-11-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 PIRSF PIRSF002191 1 118 6.3E-46 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.5E-35 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.5E-35 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02705 83d8d284cea35c35abc941de37c1fc16 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.5E-35 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 PIRSF PIRSF000441 5 230 2.9E-80 T 11-11-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 Gene3D G3DSA:2.160.10.10 71 197 8.3E-37 T 11-11-2016 WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 SUPERFAMILY SSF51161 12 174 1.16E-54 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 77 114 9.7E-5 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 4.8E-9 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 Gene3D G3DSA:1.10.3130.10 2 70 1.5E-21 T 11-11-2016 WS_RS02710 e324afd1a5d1b45c657473d75f864d84 237 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 11 172 1.8E-70 T 11-11-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 WS_RS09630 d3d2dfcf9e99b6299e755c53d0f2fcc2 106 PIRSF PIRSF020408 1 103 8.1E-42 T 11-11-2016 IPR016772 Uncharacterised conserved protein UCP020408 WS_RS09630 d3d2dfcf9e99b6299e755c53d0f2fcc2 106 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 89 4.7E-19 T 11-11-2016 IPR016772 Uncharacterised conserved protein UCP020408 WS_RS08230 0b8cdf0f407548ee63dfc8c14fdb92cd 189 Pfam PF01794 Ferric reductase like transmembrane component 38 144 6.4E-13 T 11-11-2016 IPR013130 Ferric reductase transmembrane component-like domain WS_RS03630 6572c2e64c7867dc57e7aabd8a73b5e5 80 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 75 1.8E-25 T 11-11-2016 IPR005243 Redox-active disulphide protein 2 WS_RS03630 6572c2e64c7867dc57e7aabd8a73b5e5 80 SUPERFAMILY SSF52833 1 75 1.54E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03630 6572c2e64c7867dc57e7aabd8a73b5e5 80 Gene3D G3DSA:3.40.30.10 1 75 9.3E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03630 6572c2e64c7867dc57e7aabd8a73b5e5 80 Pfam PF13192 Thioredoxin domain 1 75 4.4E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03630 6572c2e64c7867dc57e7aabd8a73b5e5 80 PIRSF PIRSF037031 1 77 4.6E-34 T 11-11-2016 IPR005243 Redox-active disulphide protein 2 WS_RS02240 7caabe65001a32b70436167c4fc81808 318 Gene3D G3DSA:3.80.30.20 29 258 1.6E-26 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS02240 7caabe65001a32b70436167c4fc81808 318 Pfam PF04055 Radical SAM superfamily 41 222 1.5E-11 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS02240 7caabe65001a32b70436167c4fc81808 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 315 7.8E-90 T 11-11-2016 IPR005911 Protein YhcC-like GO:0051536 WS_RS02240 7caabe65001a32b70436167c4fc81808 318 SMART SM00729 21 268 4.3E-35 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS02240 7caabe65001a32b70436167c4fc81808 318 Pfam PF16199 Radical_SAM C-terminal domain 231 309 3.7E-20 T 11-11-2016 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 WS_RS02240 7caabe65001a32b70436167c4fc81808 318 SUPERFAMILY SSF102114 9 275 2.75E-45 T 11-11-2016 WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 Pfam PF01047 MarR family 33 90 1.4E-12 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 SUPERFAMILY SSF46785 6 141 2.83E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 2.4E-6 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 2.4E-6 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 2.4E-6 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 2.4E-6 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 SMART SM00347 26 126 3.6E-20 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 WS_RS04065 e5f29409049d5dc7bfe4053aeceae94b 151 Gene3D G3DSA:1.10.10.10 5 142 5.7E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS06165 de03382521e0dce2a1d1e5fdb283c697 114 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 71 1.6E-23 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor WS_RS06165 de03382521e0dce2a1d1e5fdb283c697 114 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 19.815 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor WS_RS06165 de03382521e0dce2a1d1e5fdb283c697 114 SMART SM01234 1 68 2.0E-30 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor WS_RS06165 de03382521e0dce2a1d1e5fdb283c697 114 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 15 66 4.0E-24 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor WS_RS06165 de03382521e0dce2a1d1e5fdb283c697 114 Pfam PF01809 Haemolytic domain 3 67 1.4E-21 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor WS_RS06250 aa5a85a00a32edc540445da35793b3f4 120 Pfam PF01230 HIT domain 10 102 2.0E-25 T 11-11-2016 IPR001310 Histidine triad (HIT) protein WS_RS06250 aa5a85a00a32edc540445da35793b3f4 120 SUPERFAMILY SSF54197 2 107 2.78E-30 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 WS_RS06250 aa5a85a00a32edc540445da35793b3f4 120 Gene3D G3DSA:3.30.428.10 2 106 9.8E-29 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 WS_RS06250 aa5a85a00a32edc540445da35793b3f4 120 ProSitePatterns PS00892 HIT domain signature. 82 100 - T 11-11-2016 IPR019808 Histidine triad, conserved site WS_RS06250 aa5a85a00a32edc540445da35793b3f4 120 PRINTS PR00332 Histidine triad family signature 89 99 4.4E-17 T 11-11-2016 IPR001310 Histidine triad (HIT) protein WS_RS06250 aa5a85a00a32edc540445da35793b3f4 120 PRINTS PR00332 Histidine triad family signature 3 19 4.4E-17 T 11-11-2016 IPR001310 Histidine triad (HIT) protein WS_RS06250 aa5a85a00a32edc540445da35793b3f4 120 PRINTS PR00332 Histidine triad family signature 24 42 4.4E-17 T 11-11-2016 IPR001310 Histidine triad (HIT) protein WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 8.6E-24 T 11-11-2016 WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 309 8.6E-24 T 11-11-2016 WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 8.6E-24 T 11-11-2016 WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 242 8.6E-24 T 11-11-2016 WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 500 6.8E-141 T 11-11-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 Gene3D G3DSA:3.40.50.150 204 434 2.0E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 Pfam PF12161 HsdM N-terminal domain 9 164 7.2E-23 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 Pfam PF02384 N-6 DNA Methylase 178 482 9.3E-111 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 SUPERFAMILY SSF53335 9 46 3.19E-133 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05450 f9fba1ef80d90586437a52bd5a04b260 520 SUPERFAMILY SSF53335 85 517 3.19E-133 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00190 28ac3516899207d030c7790a7a29e4ca 203 Gene3D G3DSA:2.160.10.10 78 199 5.9E-27 T 11-11-2016 WS_RS00190 28ac3516899207d030c7790a7a29e4ca 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 151 184 0.0015 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS00190 28ac3516899207d030c7790a7a29e4ca 203 Gene3D G3DSA:3.40.50.20 2 77 2.0E-21 T 11-11-2016 IPR016185 Pre-ATP-grasp domain WS_RS00190 28ac3516899207d030c7790a7a29e4ca 203 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 2 199 1.7E-66 T 11-11-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like WS_RS00190 28ac3516899207d030c7790a7a29e4ca 203 SUPERFAMILY SSF51161 2 201 7.76E-42 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS10300 c059a949981e28f77cc53bbcb50159c7 362 PIRSF PIRSF000390 2 362 1.1E-98 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS10300 c059a949981e28f77cc53bbcb50159c7 362 SUPERFAMILY SSF53383 9 359 1.46E-112 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS10300 c059a949981e28f77cc53bbcb50159c7 362 Gene3D G3DSA:3.90.1150.10 248 358 1.6E-35 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS10300 c059a949981e28f77cc53bbcb50159c7 362 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 359 1.1E-110 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase WS_RS10300 c059a949981e28f77cc53bbcb50159c7 362 Gene3D G3DSA:3.40.640.10 13 244 1.2E-84 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 Gene3D G3DSA:3.40.50.300 179 365 5.9E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 SUPERFAMILY SSF52540 178 426 5.1E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 SUPERFAMILY SSF140990 439 630 1.31E-59 T 11-11-2016 WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 23 634 34.9 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 355 3.0E-45 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 SMART SM00382 218 359 6.0E-25 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 Gene3D G3DSA:1.10.8.60 366 431 1.9E-25 T 11-11-2016 WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 Pfam PF01434 Peptidase family M41 418 626 1.5E-72 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 ProSitePatterns PS00674 AAA-protein family signature. 327 345 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 WS_RS03035 d807d325cecf794b262ca2b5f43dc461 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 133 627 1.9E-219 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 WS_RS08010 d374016dcec7bc213c5a3a74ff266c47 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 9 117 3.2E-36 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08010 d374016dcec7bc213c5a3a74ff266c47 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 24.276 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08010 d374016dcec7bc213c5a3a74ff266c47 118 SUPERFAMILY SSF53137 9 116 5.89E-41 T 11-11-2016 WS_RS08010 d374016dcec7bc213c5a3a74ff266c47 118 Gene3D G3DSA:3.30.420.100 26 116 1.6E-25 T 11-11-2016 WS_RS08010 d374016dcec7bc213c5a3a74ff266c47 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 117 2.8E-37 T 11-11-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS01280 a68e6d331dfeaf67e060850de8c1b919 249 Pfam PF09674 Protein of unknown function (DUF2400) 27 243 3.0E-60 T 11-11-2016 IPR014127 Conserved hypothetical protein CHP02757 WS_RS01280 a68e6d331dfeaf67e060850de8c1b919 249 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 24 244 1.5E-83 T 11-11-2016 IPR014127 Conserved hypothetical protein CHP02757 WS_RS08285 4aa3e21d2092e18375107a49047ac29b 270 Pfam PF13860 FlgD Ig-like domain 148 220 1.2E-11 T 11-11-2016 IPR025965 FlgD Ig-like domain WS_RS08285 4aa3e21d2092e18375107a49047ac29b 270 Pfam PF03963 Flagellar hook capping protein - N-terminal region 5 76 1.2E-14 T 11-11-2016 IPR005648 Flagellar hook capping protein WS_RS01695 e5da46baa33740b41f822cc2381bede0 275 Gene3D G3DSA:3.90.550.10 2 273 2.1E-64 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS01695 e5da46baa33740b41f822cc2381bede0 275 Pfam PF00483 Nucleotidyl transferase 9 265 5.4E-31 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 WS_RS01695 e5da46baa33740b41f822cc2381bede0 275 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 8.0E-121 T 11-11-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 WS_RS01695 e5da46baa33740b41f822cc2381bede0 275 SUPERFAMILY SSF53448 2 269 6.31E-61 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 Gene3D G3DSA:3.40.50.2300 2 118 1.4E-30 T 11-11-2016 WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 Pfam PF00072 Response regulator receiver domain 4 112 3.7E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 Gene3D G3DSA:1.10.10.10 135 215 1.8E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 SUPERFAMILY SSF52172 1 136 7.12E-31 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 SMART SM00862 144 215 9.5E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 SUPERFAMILY SSF46894 128 215 1.3E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 SMART SM00448 2 112 4.6E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06980 a66bb345a0a3d5fbcf8f925cf8a347b6 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 7.1E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS06995 946c2b7ddfe09f42cc9206323ed68f49 231 SUPERFAMILY SSF52540 2 226 2.37E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06995 946c2b7ddfe09f42cc9206323ed68f49 231 Pfam PF00005 ABC transporter 17 159 5.0E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS06995 946c2b7ddfe09f42cc9206323ed68f49 231 SMART SM00382 26 208 2.4E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06995 946c2b7ddfe09f42cc9206323ed68f49 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS06995 946c2b7ddfe09f42cc9206323ed68f49 231 Gene3D G3DSA:3.40.50.300 1 225 1.6E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05370 519059b2f16a0984835b0fcff10a1ce1 294 Pfam PF00892 EamA-like transporter family 10 135 9.7E-8 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS05370 519059b2f16a0984835b0fcff10a1ce1 294 Pfam PF00892 EamA-like transporter family 149 279 3.7E-11 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS05370 519059b2f16a0984835b0fcff10a1ce1 294 SUPERFAMILY SSF103481 43 137 1.57E-12 T 11-11-2016 WS_RS05370 519059b2f16a0984835b0fcff10a1ce1 294 SUPERFAMILY SSF103481 187 285 5.49E-11 T 11-11-2016 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PIRSF PIRSF000310 30 388 3.1E-145 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 253 335 6.1E-33 T 11-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 Gene3D G3DSA:3.40.50.700 75 251 9.7E-52 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 87 233 4.4E-29 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 28 386 6.9E-169 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 186 210 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 237 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 240 257 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 310 323 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 258 276 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 95 119 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 141 164 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 282 308 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 72 94 2.8E-83 T 11-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 Gene3D G3DSA:4.10.480.10 253 337 1.0E-39 T 11-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal WS_RS07940 0136e814d64bdf92a66e36e7f8ffc7d7 388 SUPERFAMILY SSF56770 75 337 2.69E-88 T 11-11-2016 WS_RS07090 b0df6d5d72412b2ac5413072cd61b617 347 SUPERFAMILY SSF46626 199 344 1.25E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS07090 b0df6d5d72412b2ac5413072cd61b617 347 Pfam PF00034 Cytochrome c 220 322 1.0E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS07090 b0df6d5d72412b2ac5413072cd61b617 347 SUPERFAMILY SSF46626 55 200 2.38E-43 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS07090 b0df6d5d72412b2ac5413072cd61b617 347 PIRSF PIRSF000294 6 346 7.0E-129 T 11-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 WS_RS07090 b0df6d5d72412b2ac5413072cd61b617 347 Pfam PF03150 Di-haem cytochrome c peroxidase 62 211 4.0E-42 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 WS_RS07090 b0df6d5d72412b2ac5413072cd61b617 347 Gene3D G3DSA:1.10.760.10 57 203 7.6E-42 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS07090 b0df6d5d72412b2ac5413072cd61b617 347 Gene3D G3DSA:1.10.760.10 204 335 8.4E-33 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS02935 e970df9accc65932f32667b0293f6ba5 585 Pfam PF00474 Sodium:solute symporter family 33 305 8.0E-36 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS02935 e970df9accc65932f32667b0293f6ba5 585 Pfam PF00474 Sodium:solute symporter family 391 509 6.2E-18 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS02935 e970df9accc65932f32667b0293f6ba5 585 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 584 4.3E-255 T 11-11-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily WS_RS02935 e970df9accc65932f32667b0293f6ba5 585 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 491 511 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 WS_RS09815 56ec62c7e3b61ccde39b61c20e20d96a 206 Pfam PF00702 haloacid dehalogenase-like hydrolase 1 171 8.2E-18 T 11-11-2016 WS_RS09815 56ec62c7e3b61ccde39b61c20e20d96a 206 SUPERFAMILY SSF56784 1 206 1.73E-49 T 11-11-2016 IPR023214 HAD-like domain WS_RS09815 56ec62c7e3b61ccde39b61c20e20d96a 206 Gene3D G3DSA:1.10.150.210 14 64 2.8E-21 T 11-11-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 WS_RS09815 56ec62c7e3b61ccde39b61c20e20d96a 206 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 204 5.0E-75 T 11-11-2016 WS_RS09815 56ec62c7e3b61ccde39b61c20e20d96a 206 Gene3D G3DSA:3.40.50.1000 65 201 1.0E-32 T 11-11-2016 IPR023214 HAD-like domain WS_RS09815 56ec62c7e3b61ccde39b61c20e20d96a 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 172 7.0E-28 T 11-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 WS_RS03565 ef778751f6554ef9ff7337f51fa46cb5 187 SUPERFAMILY SSF53098 18 178 4.3E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS03565 ef778751f6554ef9ff7337f51fa46cb5 187 Pfam PF00665 Integrase core domain 24 134 2.5E-24 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS03565 ef778751f6554ef9ff7337f51fa46cb5 187 Gene3D G3DSA:3.30.420.10 18 172 4.9E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 Gene3D G3DSA:3.10.350.10 308 353 6.5E-14 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 Pfam PF01464 Transglycosylase SLT domain 86 182 3.9E-26 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 Gene3D G3DSA:1.10.530.10 70 215 2.3E-40 T 11-11-2016 WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 SMART SM00257 238 285 19.0 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 SMART SM00257 309 352 2.5E-11 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 SMART SM00257 362 405 7.7E-7 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 SUPERFAMILY SSF53955 72 213 5.48E-33 T 11-11-2016 IPR023346 Lysozyme-like domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 SUPERFAMILY SSF54106 308 352 1.57E-9 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 SUPERFAMILY SSF54106 362 404 1.83E-8 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 Pfam PF01476 LysM domain 363 403 2.9E-8 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 Pfam PF01476 LysM domain 310 352 5.2E-11 T 11-11-2016 IPR018392 LysM domain WS_RS09770 02ce132929f16f10e9f497dad7358cce 406 Gene3D G3DSA:3.10.350.10 362 404 2.3E-12 T 11-11-2016 IPR018392 LysM domain WS_RS00295 e5a179e4c06ccaa18c9685a56a90e949 359 Gene3D G3DSA:3.80.30.20 108 311 3.2E-11 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS00295 e5a179e4c06ccaa18c9685a56a90e949 359 SUPERFAMILY SSF102114 106 311 1.01E-15 T 11-11-2016 WS_RS00295 e5a179e4c06ccaa18c9685a56a90e949 359 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 353 4.0E-134 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00295 e5a179e4c06ccaa18c9685a56a90e949 359 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 352 68.348 T 11-11-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00295 e5a179e4c06ccaa18c9685a56a90e949 359 PIRSF PIRSF006004 1 358 4.4E-130 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00295 e5a179e4c06ccaa18c9685a56a90e949 359 Pfam PF04055 Radical SAM superfamily 114 277 6.0E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS00295 e5a179e4c06ccaa18c9685a56a90e949 359 SMART SM00729 109 327 0.0037 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 PIRSF PIRSF005814 42 745 3.8E-92 T 11-11-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 SMART SM00463 668 745 6.6E-11 T 11-11-2016 IPR002625 Smr domain WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 SUPERFAMILY SSF52540 278 492 6.58E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 6 745 18.721 T 11-11-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 SMART SM00534 305 489 2.1E-31 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 Pfam PF00488 MutS domain V 309 488 2.0E-14 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 Pfam PF01713 Smr domain 671 745 1.3E-17 T 11-11-2016 IPR002625 Smr domain WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 SUPERFAMILY SSF160443 669 744 1.07E-9 T 11-11-2016 IPR002625 Smr domain WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 SMART SM00533 10 296 0.0083 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 WS_RS07075 506e212a8ea5527deed1c4d869501da4 745 Gene3D G3DSA:3.40.50.300 277 492 9.5E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 6 145 5.4E-66 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 SUPERFAMILY SSF54768 3 72 3.03E-24 T 11-11-2016 WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 146 31.403 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 Gene3D G3DSA:3.30.230.10 74 144 2.1E-31 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 Pfam PF00333 Ribosomal protein S5, N-terminal domain 8 72 2.6E-29 T 11-11-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 Gene3D G3DSA:3.30.160.20 6 70 1.7E-30 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 Pfam PF03719 Ribosomal protein S5, C-terminal domain 84 145 1.2E-27 T 11-11-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 SUPERFAMILY SSF54211 77 144 7.33E-24 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS08005 174b617dbcd8d5f0390d52dfedc69ae5 146 ProSitePatterns PS00585 Ribosomal protein S5 signature. 25 57 - T 11-11-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site WS_RS09900 929dae7ba2418661fe1a311548bdd2bf 240 SMART SM00382 28 213 4.9E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS09900 929dae7ba2418661fe1a311548bdd2bf 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS09900 929dae7ba2418661fe1a311548bdd2bf 240 SUPERFAMILY SSF52540 4 236 6.63E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09900 929dae7ba2418661fe1a311548bdd2bf 240 Pfam PF00005 ABC transporter 20 165 6.6E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS09900 929dae7ba2418661fe1a311548bdd2bf 240 Gene3D G3DSA:3.40.50.300 3 230 6.0E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09900 929dae7ba2418661fe1a311548bdd2bf 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 239 3.8E-104 T 11-11-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 WS_RS09175 9a8897cfb25b58e9fd4fd82cc362ddfb 412 Pfam PF07690 Major Facilitator Superfamily 10 314 3.1E-19 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 WS_RS09175 9a8897cfb25b58e9fd4fd82cc362ddfb 412 ProSitePatterns PS00216 Sugar transport proteins signature 1. 251 268 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 WS_RS09175 9a8897cfb25b58e9fd4fd82cc362ddfb 412 SUPERFAMILY SSF103473 3 369 3.14E-32 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS09175 9a8897cfb25b58e9fd4fd82cc362ddfb 412 Gene3D G3DSA:1.20.1250.20 201 372 6.4E-18 T 11-11-2016 WS_RS09175 9a8897cfb25b58e9fd4fd82cc362ddfb 412 Gene3D G3DSA:1.20.1250.20 9 173 1.5E-9 T 11-11-2016 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 353 6.7E-16 T 11-11-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 7.7E-20 T 11-11-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 PIRSF PIRSF000804 1 355 4.4E-76 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 SMART SM00480 17 355 1.0E-70 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 SUPERFAMILY SSF55979 126 239 4.63E-20 T 11-11-2016 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 Gene3D G3DSA:3.10.150.10 125 243 3.1E-24 T 11-11-2016 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 Gene3D G3DSA:3.10.150.10 1 120 3.9E-22 T 11-11-2016 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 Gene3D G3DSA:3.10.150.10 244 353 4.0E-18 T 11-11-2016 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 1.9E-17 T 11-11-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 353 8.2E-85 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 SUPERFAMILY SSF55979 1 119 2.09E-20 T 11-11-2016 WS_RS00010 a24bfc0899d35c95bd72239557b05809 355 SUPERFAMILY SSF55979 240 353 5.89E-20 T 11-11-2016 WS_RS00305 8e0e3bce5d60f8a4bfb3827c046796f7 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 3 253 48.981 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 WS_RS00305 8e0e3bce5d60f8a4bfb3827c046796f7 254 Pfam PF00977 Histidine biosynthesis protein 7 236 1.7E-91 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 WS_RS00305 8e0e3bce5d60f8a4bfb3827c046796f7 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 253 1.4E-115 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 WS_RS00305 8e0e3bce5d60f8a4bfb3827c046796f7 254 SUPERFAMILY SSF51366 4 253 3.14E-83 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 WS_RS00305 8e0e3bce5d60f8a4bfb3827c046796f7 254 Gene3D G3DSA:3.20.20.70 6 254 1.3E-106 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06335 9b42d995245a46d0df5814f559bcd9d0 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 1.1E-14 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 WS_RS06335 9b42d995245a46d0df5814f559bcd9d0 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 1.1E-14 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 WS_RS06335 9b42d995245a46d0df5814f559bcd9d0 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.1E-14 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 WS_RS06335 9b42d995245a46d0df5814f559bcd9d0 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 146 2.5E-38 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS06335 9b42d995245a46d0df5814f559bcd9d0 154 SUPERFAMILY SSF52788 4 147 7.2E-44 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS06335 9b42d995245a46d0df5814f559bcd9d0 154 SMART SM00226 4 148 8.9E-45 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS06335 9b42d995245a46d0df5814f559bcd9d0 154 Gene3D G3DSA:3.40.50.270 5 148 2.8E-48 T 11-11-2016 WS_RS01040 178589c860a57f641efe2986ef192532 463 Pfam PF13690 Chemotaxis phosphatase CheX 356 449 1.9E-16 T 11-11-2016 IPR028051 Chemotaxis phosphatase CheX-like domain WS_RS01040 178589c860a57f641efe2986ef192532 463 Gene3D G3DSA:3.40.1550.10 320 432 4.5E-17 T 11-11-2016 IPR028976 CheC-like domain WS_RS01040 178589c860a57f641efe2986ef192532 463 SUPERFAMILY SSF103039 319 460 1.7E-22 T 11-11-2016 IPR028976 CheC-like domain WS_RS05100 9be466dadd5393a693abf8b7eb133f94 838 Pfam PF13109 AsmA-like C-terminal region 616 829 1.3E-81 T 11-11-2016 WS_RS05100 9be466dadd5393a693abf8b7eb133f94 838 Pfam PF13116 Protein of unknown function 193 459 4.8E-43 T 11-11-2016 IPR025263 Domain of unknown function DUF3971 WS_RS04705 b367fa96355dea90edcaba0a7fb8b44b 250 SMART SM00382 26 209 9.8E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS04705 b367fa96355dea90edcaba0a7fb8b44b 250 Pfam PF00005 ABC transporter 17 161 9.7E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS04705 b367fa96355dea90edcaba0a7fb8b44b 250 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS04705 b367fa96355dea90edcaba0a7fb8b44b 250 SUPERFAMILY SSF52540 2 216 8.88E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04705 b367fa96355dea90edcaba0a7fb8b44b 250 Gene3D G3DSA:3.40.50.300 1 220 1.8E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03720 6b9cc61b7fee707c05a02dcb18c15840 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.0E-57 T 11-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03720 6b9cc61b7fee707c05a02dcb18c15840 231 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 11-11-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03720 6b9cc61b7fee707c05a02dcb18c15840 231 Gene3D G3DSA:3.40.50.1860 1 113 7.7E-30 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03720 6b9cc61b7fee707c05a02dcb18c15840 231 SUPERFAMILY SSF53681 118 228 7.59E-28 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03720 6b9cc61b7fee707c05a02dcb18c15840 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 1.0E-51 T 11-11-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 WS_RS03720 6b9cc61b7fee707c05a02dcb18c15840 231 SUPERFAMILY SSF53681 1 111 3.53E-27 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS03720 6b9cc61b7fee707c05a02dcb18c15840 231 Gene3D G3DSA:3.40.50.1860 114 216 4.0E-29 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 SUPERFAMILY SSF160246 74 170 1.31E-13 T 11-11-2016 WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 SUPERFAMILY SSF52540 198 579 4.18E-97 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 174 2.0E-17 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 Gene3D G3DSA:3.40.50.300 313 580 6.3E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 SMART SM00382 335 458 0.0013 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 Pfam PF00437 Type II/IV secretion system protein 214 474 2.6E-77 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 Gene3D G3DSA:3.30.450.90 193 307 6.7E-42 T 11-11-2016 WS_RS02665 d9dd0e7ad125fa168e6b776b16cc7227 583 SUPERFAMILY SSF160246 2 74 8.89E-12 T 11-11-2016 WS_RS08745 7617f0537a39654a03d2fd41a8d13fd2 329 PIRSF PIRSF006470 1 329 1.9E-120 T 11-11-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 WS_RS08745 7617f0537a39654a03d2fd41a8d13fd2 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 27 282 7.7E-111 T 11-11-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 WS_RS08745 7617f0537a39654a03d2fd41a8d13fd2 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 27 314 8.3E-108 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 WS_RS06380 255878f250ec64f7a2c6883d00762018 404 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 381 3.8E-147 T 11-11-2016 IPR023874 DNA modification/repair radical SAM protein, putative WS_RS06380 255878f250ec64f7a2c6883d00762018 404 Gene3D G3DSA:3.20.20.70 42 221 1.1E-7 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06380 255878f250ec64f7a2c6883d00762018 404 SUPERFAMILY SSF47781 282 356 2.45E-5 T 11-11-2016 IPR010994 RuvA domain 2-like WS_RS06380 255878f250ec64f7a2c6883d00762018 404 SUPERFAMILY SSF102114 31 254 5.0E-15 T 11-11-2016 WS_RS02500 101e7f84f8e7a564b995aeba1cd9d030 217 SUPERFAMILY SSF55681 5 162 4.47E-31 T 11-11-2016 WS_RS02500 101e7f84f8e7a564b995aeba1cd9d030 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 15 132 7.6E-14 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 WS_RS02500 101e7f84f8e7a564b995aeba1cd9d030 217 Gene3D G3DSA:3.30.930.10 4 139 4.9E-30 T 11-11-2016 WS_RS02500 101e7f84f8e7a564b995aeba1cd9d030 217 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 9 191 2.2E-33 T 11-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS00690 62206a58fc2836d6bee910feddb9df25 271 Pfam PF02540 NAD synthase 11 74 1.1E-6 T 11-11-2016 IPR022310 NAD/GMP synthase WS_RS00690 62206a58fc2836d6bee910feddb9df25 271 SUPERFAMILY SSF52402 18 212 9.04E-34 T 11-11-2016 WS_RS00690 62206a58fc2836d6bee910feddb9df25 271 Gene3D G3DSA:3.40.50.620 16 166 6.6E-27 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00690 62206a58fc2836d6bee910feddb9df25 271 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 6 256 1.2E-70 T 11-11-2016 IPR005232 Conserved hypothetical protein CHP00268 WS_RS00690 62206a58fc2836d6bee910feddb9df25 271 PIRSF PIRSF006661 1 269 1.3E-86 T 11-11-2016 IPR005232 Conserved hypothetical protein CHP00268 WS_RS09670 45e4085122e684f315ae34c910f9a181 431 Gene3D G3DSA:1.10.3410.10 237 342 1.2E-22 T 11-11-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain WS_RS09670 45e4085122e684f315ae34c910f9a181 431 SMART SM00471 54 247 1.3E-8 T 11-11-2016 IPR003607 HD/PDEase domain WS_RS09670 45e4085122e684f315ae34c910f9a181 431 Gene3D G3DSA:1.10.3210.10 8 110 1.1E-59 T 11-11-2016 IPR006674 HD domain WS_RS09670 45e4085122e684f315ae34c910f9a181 431 Gene3D G3DSA:1.10.3210.10 146 236 1.1E-59 T 11-11-2016 IPR006674 HD domain WS_RS09670 45e4085122e684f315ae34c910f9a181 431 SUPERFAMILY SSF109604 19 184 1.31E-60 T 11-11-2016 WS_RS09670 45e4085122e684f315ae34c910f9a181 431 SUPERFAMILY SSF109604 216 422 1.31E-60 T 11-11-2016 WS_RS09670 45e4085122e684f315ae34c910f9a181 431 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 21 422 5.7E-94 T 11-11-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 WS_RS09670 45e4085122e684f315ae34c910f9a181 431 Pfam PF13286 Phosphohydrolase-associated domain 333 422 1.1E-4 T 11-11-2016 IPR026875 Phosphohydrolase-associated domain WS_RS09670 45e4085122e684f315ae34c910f9a181 431 Gene3D G3DSA:1.10.3550.10 111 143 8.1E-30 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain WS_RS09670 45e4085122e684f315ae34c910f9a181 431 Gene3D G3DSA:1.10.3550.10 343 429 8.1E-30 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain WS_RS09670 45e4085122e684f315ae34c910f9a181 431 Pfam PF01966 HD domain 58 128 5.6E-9 T 11-11-2016 IPR006674 HD domain WS_RS03760 e6fa225968a5454df9a41338dd5f98f3 373 Gene3D G3DSA:3.90.1150.10 250 366 9.6E-5 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS03760 e6fa225968a5454df9a41338dd5f98f3 373 SUPERFAMILY SSF53383 14 368 1.6E-76 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS03760 e6fa225968a5454df9a41338dd5f98f3 373 Pfam PF00155 Aminotransferase class I and II 31 358 8.1E-24 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 WS_RS03760 e6fa225968a5454df9a41338dd5f98f3 373 Gene3D G3DSA:3.40.640.10 46 249 4.4E-58 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS07050 ae1e73d776c513987ffe5b18a2b93989 251 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 17 235 3.1E-59 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 WS_RS03925 3c6bf1fb22c3e33086de9b13cbc986a4 91 Pfam PF01649 Ribosomal protein S20 2 84 4.8E-26 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS03925 3c6bf1fb22c3e33086de9b13cbc986a4 91 Gene3D G3DSA:1.20.58.110 1 86 7.4E-28 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS03925 3c6bf1fb22c3e33086de9b13cbc986a4 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 91 7.0E-39 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS03925 3c6bf1fb22c3e33086de9b13cbc986a4 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.15 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS03925 3c6bf1fb22c3e33086de9b13cbc986a4 91 SUPERFAMILY SSF46992 3 86 4.71E-27 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS03925 3c6bf1fb22c3e33086de9b13cbc986a4 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 7.2E-29 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 1.3E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 508 1.3E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 1.3E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 1.3E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 SUPERFAMILY SSF55874 399 547 6.29E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 443 546 7.3E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 SMART SM00387 439 548 1.7E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 SUPERFAMILY SSF47384 324 394 4.32E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06835 73453b1f0e521b82a533d7d3784b5d02 548 Gene3D G3DSA:3.30.565.10 400 547 2.8E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10370 cf094871edde488648188f9e1848c894 218 Gene3D G3DSA:1.10.10.10 137 217 3.4E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS10370 cf094871edde488648188f9e1848c894 218 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10370 cf094871edde488648188f9e1848c894 218 SUPERFAMILY SSF52172 3 176 8.11E-30 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10370 cf094871edde488648188f9e1848c894 218 SMART SM00862 146 216 3.4E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS10370 cf094871edde488648188f9e1848c894 218 Gene3D G3DSA:3.40.50.2300 2 121 2.0E-28 T 11-11-2016 WS_RS10370 cf094871edde488648188f9e1848c894 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 2.7E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS10370 cf094871edde488648188f9e1848c894 218 SMART SM00448 2 113 8.1E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03275 fcbfdfdf442af51e3d5d467e6d9db92d 244 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 91 3.3E-31 T 11-11-2016 IPR010627 Peptidase A24A, N-terminal WS_RS03275 fcbfdfdf442af51e3d5d467e6d9db92d 244 Pfam PF01478 Type IV leader peptidase family 105 205 1.3E-14 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 WS_RS07595 755b3e954fd32785df00cf860508d837 157 Gene3D G3DSA:2.30.110.10 4 155 2.8E-44 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 WS_RS07595 755b3e954fd32785df00cf860508d837 157 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 154 5.9E-24 T 11-11-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related WS_RS07595 755b3e954fd32785df00cf860508d837 157 SUPERFAMILY SSF50475 4 156 1.63E-42 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 WS_RS00965 2078bd3ab8a55f3f3cfbb2f08bcdddab 177 SMART SM00155 116 143 1.1E-4 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 WS_RS00965 2078bd3ab8a55f3f3cfbb2f08bcdddab 177 Pfam PF13091 PLD-like domain 38 170 1.8E-26 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 WS_RS00965 2078bd3ab8a55f3f3cfbb2f08bcdddab 177 Gene3D G3DSA:3.30.870.10 27 176 3.9E-28 T 11-11-2016 WS_RS00965 2078bd3ab8a55f3f3cfbb2f08bcdddab 177 SUPERFAMILY SSF56024 32 176 2.16E-28 T 11-11-2016 WS_RS04925 5fd243333d853259972df365a5ae8fb8 174 SMART SM00052 1 170 1.7E-11 T 11-11-2016 IPR001633 EAL domain WS_RS04925 5fd243333d853259972df365a5ae8fb8 174 Gene3D G3DSA:3.20.20.450 12 167 3.7E-49 T 11-11-2016 IPR001633 EAL domain WS_RS04925 5fd243333d853259972df365a5ae8fb8 174 SUPERFAMILY SSF141868 12 167 1.96E-46 T 11-11-2016 IPR001633 EAL domain WS_RS04925 5fd243333d853259972df365a5ae8fb8 174 Pfam PF00563 EAL domain 11 165 2.0E-44 T 11-11-2016 IPR001633 EAL domain WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 SUPERFAMILY SSF55326 3 151 5.23E-33 T 11-11-2016 WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 PIRSF PIRSF005644 1 333 1.3E-121 T 11-11-2016 IPR011854 Hydrogenase expression/formation protein HypE WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 5 333 3.9E-143 T 11-11-2016 IPR011854 Hydrogenase expression/formation protein HypE WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 Gene3D G3DSA:3.30.1330.10 18 151 3.2E-26 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 Gene3D G3DSA:3.90.650.10 158 320 6.1E-23 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 SUPERFAMILY SSF56042 154 328 4.93E-41 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 Pfam PF02769 AIR synthase related protein, C-terminal domain 159 308 2.0E-25 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS03815 e276ff8e07a0f3a9e7ad47c23fe014e1 333 Pfam PF00586 AIR synthase related protein, N-terminal domain 38 149 2.8E-16 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS07300 5e9b81520a80405f8217e710e67007de 182 SUPERFAMILY SSF55729 1 171 8.77E-34 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS07300 5e9b81520a80405f8217e710e67007de 182 Gene3D G3DSA:3.40.630.30 2 173 2.3E-36 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS07300 5e9b81520a80405f8217e710e67007de 182 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 5.4E-20 T 11-11-2016 IPR000182 GNAT domain GO:0008080 WS_RS10115 730b6af32f3f94de6f01e018cfbc536d 147 Pfam PF01300 Telomere recombination 23 109 8.7E-6 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 WS_RS10115 730b6af32f3f94de6f01e018cfbc536d 147 SUPERFAMILY SSF55821 4 146 2.72E-15 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain WS_RS10115 730b6af32f3f94de6f01e018cfbc536d 147 Gene3D G3DSA:3.90.870.10 23 137 2.4E-8 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain WS_RS02780 89f864093997832f9e09b49c7f215d2f 613 PIRSF PIRSF002741 20 599 4.3E-112 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 WS_RS02780 89f864093997832f9e09b49c7f215d2f 613 Gene3D G3DSA:3.40.190.10 216 327 9.2E-26 T 11-11-2016 WS_RS02780 89f864093997832f9e09b49c7f215d2f 613 Gene3D G3DSA:3.10.105.10 328 359 1.1E-41 T 11-11-2016 WS_RS02780 89f864093997832f9e09b49c7f215d2f 613 Gene3D G3DSA:3.10.105.10 393 565 1.1E-41 T 11-11-2016 WS_RS02780 89f864093997832f9e09b49c7f215d2f 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 511 1.6E-82 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain WS_RS02780 89f864093997832f9e09b49c7f215d2f 613 Gene3D G3DSA:3.90.76.10 68 215 1.7E-31 T 11-11-2016 WS_RS02780 89f864093997832f9e09b49c7f215d2f 613 SUPERFAMILY SSF53850 53 601 5.97E-124 T 11-11-2016 WS_RS10010 1b5b609c7bca6ed17ef32a428403bc12 164 SUPERFAMILY SSF52255 3 159 2.88E-57 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS10010 1b5b609c7bca6ed17ef32a428403bc12 164 SMART SM01001 2 153 3.6E-85 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS10010 1b5b609c7bca6ed17ef32a428403bc12 164 Pfam PF00731 AIR carboxylase 4 148 1.4E-55 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS10010 1b5b609c7bca6ed17ef32a428403bc12 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 29.385 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS10010 1b5b609c7bca6ed17ef32a428403bc12 164 PIRSF PIRSF001338 1 163 1.1E-58 T 11-11-2016 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 WS_RS10010 1b5b609c7bca6ed17ef32a428403bc12 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 1.4E-55 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS10010 1b5b609c7bca6ed17ef32a428403bc12 164 Gene3D G3DSA:3.40.50.7700 4 160 4.8E-61 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 SMART SM00871 139 290 1.6E-32 T 11-11-2016 IPR010499 Bacterial transcription activator, effector binding WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 SUPERFAMILY SSF46689 15 58 1.85E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 9.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 9.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 Pfam PF06445 GyrI-like small molecule binding domain 140 289 6.0E-28 T 11-11-2016 IPR029442 GyrI-like small molecule binding domain WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 Gene3D G3DSA:1.10.10.60 15 63 3.4E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 Pfam PF12833 Helix-turn-helix domain 33 112 7.7E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 SUPERFAMILY SSF55136 140 289 5.86E-32 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 SUPERFAMILY SSF46689 63 115 6.72E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 Gene3D G3DSA:3.20.80.10 140 289 1.2E-39 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 Gene3D G3DSA:1.10.10.60 64 118 6.0E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03765 934223a7dbeed59a49f27ea594f20da4 292 SMART SM00342 27 111 2.0E-25 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS00355 23ed74607caf410bd541aad71302d844 300 SMART SM00382 87 267 0.0054 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00355 23ed74607caf410bd541aad71302d844 300 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 23 289 54.666 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 WS_RS00355 23ed74607caf410bd541aad71302d844 300 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 29 288 1.8E-93 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 WS_RS00355 23ed74607caf410bd541aad71302d844 300 Gene3D G3DSA:1.20.120.140 30 98 2.6E-14 T 11-11-2016 WS_RS00355 23ed74607caf410bd541aad71302d844 300 Pfam PF00448 SRP54-type protein, GTPase domain 89 289 2.6E-71 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS00355 23ed74607caf410bd541aad71302d844 300 SMART SM00962 88 289 3.3E-102 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS00355 23ed74607caf410bd541aad71302d844 300 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 262 275 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 WS_RS00355 23ed74607caf410bd541aad71302d844 300 Gene3D G3DSA:3.40.50.300 99 289 3.2E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00355 23ed74607caf410bd541aad71302d844 300 SUPERFAMILY SSF52540 87 289 5.82E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-28 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 PRINTS PR00625 DnaJ domain signature 62 81 1.0E-28 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 PRINTS PR00625 DnaJ domain signature 42 62 1.0E-28 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-28 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 3.3E-128 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 SUPERFAMILY SSF57938 136 211 9.16E-19 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Gene3D G3DSA:1.10.287.110 3 105 1.2E-33 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 SMART SM00271 4 62 4.6E-32 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 SUPERFAMILY SSF46565 2 106 1.96E-33 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Pfam PF01556 DnaJ C terminal domain 123 333 1.4E-35 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Pfam PF00226 DnaJ domain 5 67 4.0E-28 T 11-11-2016 IPR001623 DnaJ domain WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Gene3D G3DSA:2.60.260.20 257 333 3.1E-15 T 11-11-2016 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 SUPERFAMILY SSF49493 121 154 1.96E-14 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 SUPERFAMILY SSF49493 214 254 1.96E-14 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Pfam PF00684 DnaJ central domain 149 208 4.7E-14 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-11-2016 IPR018253 DnaJ domain, conserved site WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 SUPERFAMILY SSF49493 259 344 6.8E-17 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Gene3D G3DSA:2.10.230.10 144 210 2.9E-20 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 35.954 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Gene3D G3DSA:2.60.260.20 121 143 1.8E-15 T 11-11-2016 WS_RS03385 09c8657f3487b248d6fcce83cabcf2c7 374 Gene3D G3DSA:2.60.260.20 211 254 1.8E-15 T 11-11-2016 WS_RS01310 9d1b31dbb388249fbf6124151ea6a1d4 190 SUPERFAMILY SSF55811 7 182 2.17E-36 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 WS_RS01310 9d1b31dbb388249fbf6124151ea6a1d4 190 Gene3D G3DSA:3.90.79.10 4 185 1.4E-54 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 WS_RS01310 9d1b31dbb388249fbf6124151ea6a1d4 190 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 7 180 1.9E-44 T 11-11-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 WS_RS01310 9d1b31dbb388249fbf6124151ea6a1d4 190 Pfam PF00293 NUDIX domain 38 159 1.6E-7 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 Gene3D G3DSA:3.40.50.720 216 346 2.2E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 Gene3D G3DSA:3.40.50.261 492 641 1.4E-11 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 SUPERFAMILY SSF56059 3 209 9.18E-25 T 11-11-2016 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 Pfam PF13380 CoA binding domain 228 348 4.6E-18 T 11-11-2016 IPR003781 CoA-binding GO:0048037 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 SUPERFAMILY SSF52210 504 641 1.44E-24 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 SMART SM00881 224 317 2.3E-23 T 11-11-2016 IPR003781 CoA-binding GO:0048037 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 366 495 1.3E-37 T 11-11-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 Gene3D G3DSA:3.40.50.261 347 491 9.8E-23 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 SUPERFAMILY SSF52210 346 494 2.49E-30 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 Pfam PF13549 ATP-grasp domain 2 206 2.8E-39 T 11-11-2016 WS_RS04950 6a8daad371d9ca8f21434d3f35e24e34 644 SUPERFAMILY SSF51735 219 351 1.94E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10630 943d3bac6865b89b67bae704f15fa6a0 168 SUPERFAMILY SSF52799 3 116 1.35E-7 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like WS_RS10630 943d3bac6865b89b67bae704f15fa6a0 168 Pfam PF04273 Putative phosphatase (DUF442) 8 106 5.0E-8 T 11-11-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 WS_RS10630 943d3bac6865b89b67bae704f15fa6a0 168 Gene3D G3DSA:3.90.190.10 4 110 4.7E-16 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like WS_RS03180 2c2240dc32f690d4b90edff772b9cbcd 208 PIRSF PIRSF006324 4 208 6.0E-44 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 WS_RS03180 2c2240dc32f690d4b90edff772b9cbcd 208 Pfam PF01810 LysE type translocator 18 206 4.9E-25 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 WS_RS06945 b7c37bc50b2634b8707536d2b104a7eb 65 Gene3D G3DSA:1.10.10.700 1 31 3.9E-6 T 11-11-2016 WS_RS10275 e9b85cbf91db3b608ee2affb00be1d58 255 Pfam PF08241 Methyltransferase domain 45 134 3.9E-11 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 WS_RS10275 e9b85cbf91db3b608ee2affb00be1d58 255 SUPERFAMILY SSF53335 5 200 3.58E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10275 e9b85cbf91db3b608ee2affb00be1d58 255 Gene3D G3DSA:3.40.50.150 9 215 2.4E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10320 0b84db9d0b3240967356629f17213476 380 SUPERFAMILY SSF53756 61 378 2.64E-19 T 11-11-2016 WS_RS10320 0b84db9d0b3240967356629f17213476 380 Pfam PF13439 Glycosyltransferase Family 4 68 180 2.0E-9 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS04495 d7a6b4bde2aa813616801ed34b0d3751 395 Pfam PF03916 Polysulphide reductase, NrfD 17 335 1.2E-44 T 11-11-2016 IPR005614 NrfD family WS_RS08145 9c1b00fab130ff5691970ee128b27e31 160 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 WS_RS08145 9c1b00fab130ff5691970ee128b27e31 160 Pfam PF00293 NUDIX domain 11 149 2.2E-21 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 WS_RS08145 9c1b00fab130ff5691970ee128b27e31 160 PRINTS PR00502 NUDIX hydrolase family signature 42 56 2.1E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 WS_RS08145 9c1b00fab130ff5691970ee128b27e31 160 PRINTS PR00502 NUDIX hydrolase family signature 56 71 2.1E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 WS_RS08145 9c1b00fab130ff5691970ee128b27e31 160 Gene3D G3DSA:3.90.79.10 9 155 2.2E-25 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 WS_RS08145 9c1b00fab130ff5691970ee128b27e31 160 SUPERFAMILY SSF55811 10 154 4.33E-24 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 WS_RS06885 a2be8b4a466095c5e299f82218391322 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 101 1.0E-22 T 11-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 WS_RS06885 a2be8b4a466095c5e299f82218391322 101 SUPERFAMILY SSF143430 1 83 1.83E-15 T 11-11-2016 WS_RS06885 a2be8b4a466095c5e299f82218391322 101 Pfam PF09827 CRISPR associated protein Cas2 1 80 1.3E-17 T 11-11-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 WS_RS06885 a2be8b4a466095c5e299f82218391322 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 99 13.496 T 11-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 529 541 - T 11-11-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 218 233 8.1E-48 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 569 598 8.1E-48 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 363 383 8.1E-48 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 8.1E-48 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 116 129 8.1E-48 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 527 547 8.1E-48 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 Pfam PF00311 Phosphoenolpyruvate carboxylase 112 880 3.0E-221 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 Gene3D G3DSA:1.20.1440.90 246 352 1.2E-11 T 11-11-2016 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 SUPERFAMILY SSF51621 39 880 7.38E-237 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 WS_RS08815 6dea8958ac99f5e300417b788b48aa92 880 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 117 128 - T 11-11-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 WS_RS03200 db0a71897af454e9f73340c46829cfb0 378 Pfam PF01636 Phosphotransferase enzyme family 22 278 3.9E-16 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase WS_RS03200 db0a71897af454e9f73340c46829cfb0 378 Gene3D G3DSA:3.90.1200.10 81 294 2.1E-20 T 11-11-2016 WS_RS03200 db0a71897af454e9f73340c46829cfb0 378 PIRSF PIRSF031134 1 378 4.8E-121 T 11-11-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 WS_RS03200 db0a71897af454e9f73340c46829cfb0 378 SUPERFAMILY SSF56112 3 339 3.44E-65 T 11-11-2016 IPR011009 Protein kinase-like domain WS_RS01455 f011d47703240e390a6185e10f21fd36 135 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 128 1.2E-41 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 WS_RS01455 f011d47703240e390a6185e10f21fd36 135 SUPERFAMILY SSF48013 3 131 5.36E-38 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 WS_RS01455 f011d47703240e390a6185e10f21fd36 135 Pfam PF01029 NusB family 6 127 1.2E-34 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 WS_RS01455 f011d47703240e390a6185e10f21fd36 135 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 133 22.859 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 WS_RS01455 f011d47703240e390a6185e10f21fd36 135 Gene3D G3DSA:1.10.940.10 1 133 5.2E-44 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 WS_RS09650 5d6cf949609f1c2f53ac815449fe0c2c 367 SUPERFAMILY SSF53383 15 362 2.1E-65 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS09650 5d6cf949609f1c2f53ac815449fe0c2c 367 Pfam PF00155 Aminotransferase class I and II 25 359 9.0E-39 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 WS_RS09650 5d6cf949609f1c2f53ac815449fe0c2c 367 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 221 230 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 WS_RS09650 5d6cf949609f1c2f53ac815449fe0c2c 367 Gene3D G3DSA:3.40.640.10 46 256 4.4E-59 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS09650 5d6cf949609f1c2f53ac815449fe0c2c 367 Gene3D G3DSA:3.90.1150.10 257 363 7.0E-7 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 Gene3D G3DSA:3.30.70.270 134 267 3.5E-14 T 11-11-2016 WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 SUPERFAMILY SSF55073 133 267 2.04E-14 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 Pfam PF00563 EAL domain 285 510 2.7E-58 T 11-11-2016 IPR001633 EAL domain WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 Gene3D G3DSA:3.20.20.450 280 513 4.2E-59 T 11-11-2016 IPR001633 EAL domain WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 SMART SM00052 277 516 1.4E-55 T 11-11-2016 IPR001633 EAL domain WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 SUPERFAMILY SSF141868 283 513 1.44E-62 T 11-11-2016 IPR001633 EAL domain WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 260 6.1E-8 T 11-11-2016 IPR000160 GGDEF domain WS_RS03870 8f7cf39c3b4ac1e3d713875b3f97064b 522 SMART SM00267 104 265 0.0037 T 11-11-2016 IPR000160 GGDEF domain WS_RS08140 371602239852776e5724ba822b07d16f 1263 SMART SM00387 910 1027 3.1E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.50.2300 1049 1172 1.4E-31 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Pfam PF00072 Response regulator receiver domain 1049 1158 5.2E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08140 371602239852776e5724ba822b07d16f 1263 SUPERFAMILY SSF52172 1049 1176 8.97E-30 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS08140 371602239852776e5724ba822b07d16f 1263 SMART SM00448 1047 1160 7.3E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.30.565.10 864 1023 4.3E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08140 371602239852776e5724ba822b07d16f 1263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 277 496 3.7E-13 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS08140 371602239852776e5724ba822b07d16f 1263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 249 3.1E-18 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS08140 371602239852776e5724ba822b07d16f 1263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 519 736 6.3E-40 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS08140 371602239852776e5724ba822b07d16f 1263 SUPERFAMILY SSF53850 511 744 1.92E-46 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 276 360 1.2E-7 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 453 494 1.2E-7 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 911 1023 9.0E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08140 371602239852776e5724ba822b07d16f 1263 SMART SM00388 798 863 4.0E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 213 250 9.6E-14 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 700 742 9.0E-25 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 33 110 9.6E-14 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 515 596 9.0E-25 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 597 696 1.8E-11 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:3.40.190.10 111 196 1.6E-6 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 SMART SM00062 276 498 8.8E-4 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS08140 371602239852776e5724ba822b07d16f 1263 SMART SM00062 35 253 4.1E-4 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS08140 371602239852776e5724ba822b07d16f 1263 SMART SM00062 518 740 6.8E-25 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS08140 371602239852776e5724ba822b07d16f 1263 SUPERFAMILY SSF47384 784 865 4.51E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08140 371602239852776e5724ba822b07d16f 1263 SUPERFAMILY SSF55874 852 1023 9.56E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08140 371602239852776e5724ba822b07d16f 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1024 3.5E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS08140 371602239852776e5724ba822b07d16f 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 970 980 3.5E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS08140 371602239852776e5724ba822b07d16f 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1005 3.5E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS08140 371602239852776e5724ba822b07d16f 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 966 3.5E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Gene3D G3DSA:1.10.287.130 793 859 5.2E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08140 371602239852776e5724ba822b07d16f 1263 Pfam PF00512 His Kinase A (phospho-acceptor) domain 798 863 4.7E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08140 371602239852776e5724ba822b07d16f 1263 SUPERFAMILY SSF53850 275 496 8.69E-23 T 11-11-2016 WS_RS08140 371602239852776e5724ba822b07d16f 1263 SUPERFAMILY SSF53850 29 249 6.04E-29 T 11-11-2016 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 PRINTS PR01217 Proline rich extensin signature 93 109 3.7E-9 T 11-11-2016 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 PRINTS PR01217 Proline rich extensin signature 71 92 3.7E-9 T 11-11-2016 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 PRINTS PR01217 Proline rich extensin signature 55 67 3.7E-9 T 11-11-2016 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 PRINTS PR01217 Proline rich extensin signature 23 39 3.7E-9 T 11-11-2016 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 Gene3D G3DSA:3.30.1150.10 173 249 7.4E-5 T 11-11-2016 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 180 253 4.4E-13 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 SUPERFAMILY SSF74653 176 239 1.96E-10 T 11-11-2016 WS_RS05070 61901a56f8c420cd48b4ddb1796db13c 257 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 182 254 3.0E-12 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 WS_RS00175 dbdb71799bf824615e230d9672478520 61 PIRSF PIRSF037676 1 61 2.7E-15 T 11-11-2016 IPR007774 Putative nitrogen fixation protein WS_RS00175 dbdb71799bf824615e230d9672478520 61 Pfam PF05082 Rop-like 5 57 8.6E-10 T 11-11-2016 IPR007774 Putative nitrogen fixation protein WS_RS00175 dbdb71799bf824615e230d9672478520 61 Gene3D G3DSA:1.10.287.660 3 58 3.8E-10 T 11-11-2016 IPR029012 Helix hairpin bin domain WS_RS01015 e4ea74d118839c469346ee0ccc69de28 415 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 1.2E-104 T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 WS_RS01015 e4ea74d118839c469346ee0ccc69de28 415 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 11-11-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 WS_RS01015 e4ea74d118839c469346ee0ccc69de28 415 Pfam PF00860 Permease family 11 382 1.6E-85 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS08550 7e26edb65650eef93e8f0a5e67cfef1f 379 Pfam PF01743 Poly A polymerase head domain 32 151 4.5E-20 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 WS_RS08550 7e26edb65650eef93e8f0a5e67cfef1f 379 Gene3D G3DSA:3.30.460.10 15 151 2.4E-31 T 11-11-2016 WS_RS08550 7e26edb65650eef93e8f0a5e67cfef1f 379 SUPERFAMILY SSF81891 153 339 7.32E-23 T 11-11-2016 WS_RS08550 7e26edb65650eef93e8f0a5e67cfef1f 379 Gene3D G3DSA:1.10.3090.10 152 293 2.3E-20 T 11-11-2016 WS_RS08550 7e26edb65650eef93e8f0a5e67cfef1f 379 SUPERFAMILY SSF81301 16 149 1.01E-27 T 11-11-2016 WS_RS02840 7bcf747b5d787af38c972fab378eefb6 230 Pfam PF05573 NosL 94 224 3.0E-32 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL WS_RS02840 7bcf747b5d787af38c972fab378eefb6 230 SUPERFAMILY SSF160387 120 227 3.14E-27 T 11-11-2016 WS_RS06395 d245873ce5b3814467f2a66f2afb387d 167 SUPERFAMILY SSF55785 18 115 9.77E-25 T 11-11-2016 IPR000014 PAS domain WS_RS06395 d245873ce5b3814467f2a66f2afb387d 167 Pfam PF08447 PAS fold 30 114 9.8E-14 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS06395 d245873ce5b3814467f2a66f2afb387d 167 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 112 8.1E-16 T 11-11-2016 IPR000014 PAS domain WS_RS06395 d245873ce5b3814467f2a66f2afb387d 167 Gene3D G3DSA:3.30.450.20 19 114 3.3E-20 T 11-11-2016 WS_RS02390 049f79ea01edfd5a538ceabefabbae86 190 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 161 1.0E-31 T 11-11-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS04095 3d57f16f4a7df5c7fe1afe3bbd85a609 173 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 2 158 8.9E-64 T 11-11-2016 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178 WS_RS04095 3d57f16f4a7df5c7fe1afe3bbd85a609 173 SUPERFAMILY SSF55729 2 124 1.57E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS04095 3d57f16f4a7df5c7fe1afe3bbd85a609 173 Pfam PF00583 Acetyltransferase (GNAT) family 51 124 7.4E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 WS_RS04095 3d57f16f4a7df5c7fe1afe3bbd85a609 173 Gene3D G3DSA:3.40.630.30 1 159 3.2E-50 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS10315 95d1c7aaabcd8919e0e0ebb2ce65b013 359 Gene3D G3DSA:3.40.50.2000 1 197 1.7E-70 T 11-11-2016 WS_RS10315 95d1c7aaabcd8919e0e0ebb2ce65b013 359 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 353 2.5E-91 T 11-11-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 WS_RS10315 95d1c7aaabcd8919e0e0ebb2ce65b013 359 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 351 1.6E-109 T 11-11-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 WS_RS10315 95d1c7aaabcd8919e0e0ebb2ce65b013 359 SUPERFAMILY SSF53756 1 355 1.21E-102 T 11-11-2016 WS_RS10315 95d1c7aaabcd8919e0e0ebb2ce65b013 359 Gene3D G3DSA:3.40.50.2000 198 353 1.1E-48 T 11-11-2016 WS_RS03395 24508a5151494d1bbb45137ca6c4aada 98 Pfam PF00034 Cytochrome c 17 98 3.6E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03395 24508a5151494d1bbb45137ca6c4aada 98 Gene3D G3DSA:1.10.760.10 17 98 2.1E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03395 24508a5151494d1bbb45137ca6c4aada 98 SUPERFAMILY SSF46626 7 97 5.65E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 Gene3D G3DSA:3.40.50.300 289 396 4.5E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 Gene3D G3DSA:3.40.50.300 6 55 4.5E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 Gene3D G3DSA:3.40.50.300 102 163 4.5E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 SUPERFAMILY SSF49785 697 760 4.34E-8 T 11-11-2016 IPR008979 Galactose-binding domain-like WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 SUPERFAMILY SSF52540 5 59 9.44E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 SUPERFAMILY SSF52540 94 175 9.44E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 SUPERFAMILY SSF52540 279 645 9.44E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 SUPERFAMILY SSF52540 678 700 9.44E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 393 3.6E-41 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 SUPERFAMILY SSF52980 754 887 2.73E-8 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 Gene3D G3DSA:3.40.50.300 406 498 3.2E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 Gene3D G3DSA:3.40.50.300 599 755 3.2E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05990 002b465a2d63a6fcbeecd5f4b4abff90 905 Pfam PF13361 UvrD-like helicase C-terminal domain 601 699 8.3E-11 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 Gene3D G3DSA:3.40.50.300 31 270 8.0E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 Pfam PF00154 recA bacterial DNA recombination protein 9 271 2.8E-141 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 SMART SM00382 59 231 1.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 325 9.8E-173 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 ProSitePatterns PS00321 recA signature. 216 224 - T 11-11-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 Hamap MF_00268 Protein RecA [recA]. 7 332 51.989 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 PRINTS PR00142 RecA protein signature 167 196 4.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 PRINTS PR00142 RecA protein signature 246 275 4.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 PRINTS PR00142 RecA protein signature 129 158 4.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 PRINTS PR00142 RecA protein signature 300 317 4.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 PRINTS PR00142 RecA protein signature 95 124 4.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 PRINTS PR00142 RecA protein signature 213 241 4.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 SUPERFAMILY SSF52540 6 270 3.58E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 SUPERFAMILY SSF54752 271 327 4.19E-20 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal WS_RS07100 a1d3ac938c9f076b1b6670a479193abb 350 Gene3D G3DSA:3.30.250.10 271 327 4.9E-26 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 SMART SM00729 133 346 5.9E-39 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 Pfam PF00919 Uncharacterized protein family UPF0004 4 88 1.4E-18 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 137 157 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 Pfam PF04055 Radical SAM superfamily 138 299 4.1E-20 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 Gene3D G3DSA:3.80.30.20 133 357 1.9E-59 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 407 3.1E-101 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 SUPERFAMILY SSF102114 131 355 6.8E-50 T 11-11-2016 WS_RS07185 ebf629814c6d9c576409cd05759126b7 415 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 400 6.4E-112 T 11-11-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 SUPERFAMILY SSF55347 116 240 1.5E-39 T 11-11-2016 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 Pfam PF13288 DXP reductoisomerase C-terminal domain 241 353 4.5E-25 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 358 39.812 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 122 3.0E-33 T 11-11-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 PIRSF PIRSF006205 1 358 7.3E-110 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 130 210 2.8E-30 T 11-11-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 Gene3D G3DSA:1.10.1740.10 282 358 8.2E-18 T 11-11-2016 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 SUPERFAMILY SSF69055 270 357 2.35E-19 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 SUPERFAMILY SSF51735 2 134 5.51E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 356 4.1E-110 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 WS_RS03900 d76a52e169bbb8c46eefccaec9c480e8 358 Gene3D G3DSA:3.40.50.720 2 134 4.1E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00285 1749e984d28813e68dd46bf71fbdebbc 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 145 7.4E-57 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 WS_RS00285 1749e984d28813e68dd46bf71fbdebbc 151 Pfam PF07977 FabA-like domain 12 141 2.6E-40 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 WS_RS00285 1749e984d28813e68dd46bf71fbdebbc 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 148 33.472 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 WS_RS00285 1749e984d28813e68dd46bf71fbdebbc 151 Gene3D G3DSA:3.10.129.10 3 147 3.7E-53 T 11-11-2016 IPR029069 HotDog domain WS_RS00285 1749e984d28813e68dd46bf71fbdebbc 151 SUPERFAMILY SSF54637 6 149 8.61E-45 T 11-11-2016 IPR029069 HotDog domain WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 PIRSF PIRSF000077 1 105 3.0E-38 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 1.3E-37 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 SUPERFAMILY SSF52833 3 105 6.49E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 Gene3D G3DSA:3.40.30.10 3 105 1.8E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 PRINTS PR00421 Thioredoxin family signature 29 38 8.4E-10 T 11-11-2016 WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 PRINTS PR00421 Thioredoxin family signature 21 29 8.4E-10 T 11-11-2016 WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 PRINTS PR00421 Thioredoxin family signature 69 80 8.4E-10 T 11-11-2016 WS_RS02215 9a0c4918cdc717785b2e1a711f0b17a6 106 Pfam PF00085 Thioredoxin 5 102 7.9E-31 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 WS_RS01750 a03290ef8755876610599a854b29284d 414 Pfam PF05193 Peptidase M16 inactive domain 168 343 1.5E-14 T 11-11-2016 IPR007863 Peptidase M16, C-terminal WS_RS01750 a03290ef8755876610599a854b29284d 414 Gene3D G3DSA:3.30.830.10 35 212 2.1E-27 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 WS_RS01750 a03290ef8755876610599a854b29284d 414 SUPERFAMILY SSF63411 233 401 2.5E-31 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 WS_RS01750 a03290ef8755876610599a854b29284d 414 Pfam PF00675 Insulinase (Peptidase family M16) 33 161 9.7E-9 T 11-11-2016 IPR011765 Peptidase M16, N-terminal WS_RS01750 a03290ef8755876610599a854b29284d 414 Gene3D G3DSA:3.30.830.10 232 399 9.2E-23 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 WS_RS01750 a03290ef8755876610599a854b29284d 414 SUPERFAMILY SSF63411 17 208 2.87E-31 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Gene3D G3DSA:3.90.640.10 230 293 1.9E-15 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 SUPERFAMILY SSF53067 194 375 1.05E-37 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Gene3D G3DSA:3.30.420.40 3 77 9.2E-22 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Gene3D G3DSA:3.30.420.40 153 203 9.2E-22 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Pfam PF02491 SHS2 domain inserted in FTSA 79 157 1.3E-26 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Gene3D G3DSA:3.30.420.40 204 229 6.1E-21 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Gene3D G3DSA:3.30.420.40 294 348 6.1E-21 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 PIRSF PIRSF003101 1 467 4.4E-116 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Gene3D G3DSA:3.30.1490.110 91 152 6.2E-16 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 375 6.1E-134 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Pfam PF14450 Cell division protein FtsA 202 371 2.0E-21 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Pfam PF14450 Cell division protein FtsA 7 190 2.6E-9 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 SMART SM00842 5 191 8.6E-89 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 SUPERFAMILY SSF53067 4 192 2.92E-54 T 11-11-2016 WS_RS01155 27222b7ff4b4553272709c20251a169d 467 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 467 27.906 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 29.01 T 11-11-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 9.9E-31 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 SUPERFAMILY SSF143800 1 66 4.32E-25 T 11-11-2016 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 Pfam PF01197 Ribosomal protein L31 1 65 4.2E-30 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.3E-19 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.3E-19 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02175 8a67369a9460464e0dbbd3b6f7f6ded7 67 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.3E-19 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08215 59198a3697b792f68c58753eca2bf719 237 Pfam PF00578 AhpC/TSA family 41 170 1.2E-31 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS08215 59198a3697b792f68c58753eca2bf719 237 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 191 221 1.5E-11 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS08215 59198a3697b792f68c58753eca2bf719 237 Gene3D G3DSA:3.40.30.10 40 220 1.8E-54 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS08215 59198a3697b792f68c58753eca2bf719 237 SUPERFAMILY SSF52833 41 215 1.78E-50 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03770 f7555742bb162ea356c31495463201a5 402 Gene3D G3DSA:2.160.10.10 227 402 1.5E-29 T 11-11-2016 WS_RS03770 f7555742bb162ea356c31495463201a5 402 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 177 217 1.1E-16 T 11-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 WS_RS03770 f7555742bb162ea356c31495463201a5 402 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 302 334 6.0E-12 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS03770 f7555742bb162ea356c31495463201a5 402 SUPERFAMILY SSF51161 131 338 1.52E-29 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS03770 f7555742bb162ea356c31495463201a5 402 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 19 402 40.664 T 11-11-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 WS_RS03770 f7555742bb162ea356c31495463201a5 402 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 175 2.9E-66 T 11-11-2016 WS_RS03770 f7555742bb162ea356c31495463201a5 402 Gene3D G3DSA:3.30.60.70 177 217 9.8E-23 T 11-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 SMART SM00448 17 128 7.6E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 SUPERFAMILY SSF52172 16 140 1.02E-33 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 215 400 1.0E-20 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 Gene3D G3DSA:3.30.565.10 420 558 5.1E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 Pfam PF00072 Response regulator receiver domain 20 129 5.4E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 Gene3D G3DSA:3.40.50.2300 17 139 2.9E-30 T 11-11-2016 WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 SMART SM00331 188 400 2.3E-8 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 WS_RS09970 214d8f527d9027e5e2b72ea853518f9b 573 Pfam PF13581 Histidine kinase-like ATPase domain 420 559 5.9E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06020 6fd5cceca770703d6d5959d639c3112d 403 Pfam PF12704 MacB-like periplasmic core domain 30 209 3.4E-7 T 11-11-2016 IPR025857 MacB-like periplasmic core domain WS_RS06020 6fd5cceca770703d6d5959d639c3112d 403 Pfam PF02687 FtsX-like permease family 271 396 2.7E-18 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 201 7.0E-27 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 SUPERFAMILY SSF52540 316 598 5.23E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 SUPERFAMILY SSF88697 10 113 9.44E-23 T 11-11-2016 IPR015947 PUA-like domain WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 706 714 - T 11-11-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 362 499 4.7E-22 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 SMART SM00464 12 203 6.5E-46 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 Gene3D G3DSA:3.30.230.10 600 801 3.7E-68 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 Hamap MF_01973 Lon protease [lon]. 13 803 60.738 T 11-11-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 580 802 1.7E-75 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 PIRSF PIRSF001174 1 803 1.5E-297 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 SMART SM00382 358 503 3.2E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 SUPERFAMILY SSF54211 605 800 5.31E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 366 385 8.3E-48 T 11-11-2016 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 8.3E-48 T 11-11-2016 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 605 621 8.3E-48 T 11-11-2016 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 733 752 8.3E-48 T 11-11-2016 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 756 774 8.3E-48 T 11-11-2016 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 Gene3D G3DSA:1.10.8.60 511 593 2.5E-29 T 11-11-2016 WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 Gene3D G3DSA:3.40.50.300 315 510 1.4E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09270 bdbb1c4144b24b9649a9f319954a57e7 803 TIGRFAM TIGR00763 lon: endopeptidase La 15 802 1.5E-280 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 WS_RS00425 7e671ec5f79215fb8c87b8b411a42da7 177 Pfam PF09624 Protein of unknown function (DUF2393) 33 177 1.1E-38 T 11-11-2016 IPR013417 Conserved hypothetical protein CHP02588 WS_RS03115 cc687242d70f80a5e96c4424dde6e11a 220 SMART SM00382 29 218 1.7E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS03115 cc687242d70f80a5e96c4424dde6e11a 220 SUPERFAMILY SSF52540 20 220 3.33E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03115 cc687242d70f80a5e96c4424dde6e11a 220 Gene3D G3DSA:3.40.50.300 2 220 1.5E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03115 cc687242d70f80a5e96c4424dde6e11a 220 Pfam PF00005 ABC transporter 22 169 3.6E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS03115 cc687242d70f80a5e96c4424dde6e11a 220 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS03375 5ec3b01ff0d9655512519cf52ec5cc28 167 Gene3D G3DSA:3.30.450.20 18 114 1.0E-19 T 11-11-2016 WS_RS03375 5ec3b01ff0d9655512519cf52ec5cc28 167 SUPERFAMILY SSF55785 19 115 1.22E-24 T 11-11-2016 IPR000014 PAS domain WS_RS03375 5ec3b01ff0d9655512519cf52ec5cc28 167 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 112 1.6E-13 T 11-11-2016 IPR000014 PAS domain WS_RS03375 5ec3b01ff0d9655512519cf52ec5cc28 167 Pfam PF08447 PAS fold 30 114 3.1E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS03305 053dce739320cfa715e99acde94143bc 457 Pfam PF00294 pfkB family carbohydrate kinase 15 287 3.9E-43 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB WS_RS03305 053dce739320cfa715e99acde94143bc 457 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 1 297 6.7E-111 T 11-11-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 WS_RS03305 053dce739320cfa715e99acde94143bc 457 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 329 394 9.0E-15 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 WS_RS03305 053dce739320cfa715e99acde94143bc 457 SUPERFAMILY SSF53613 1 296 9.67E-53 T 11-11-2016 IPR029056 Ribokinase-like WS_RS03305 053dce739320cfa715e99acde94143bc 457 Gene3D G3DSA:3.40.50.620 327 437 9.3E-35 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS03305 053dce739320cfa715e99acde94143bc 457 SUPERFAMILY SSF52374 327 454 3.38E-24 T 11-11-2016 WS_RS03305 053dce739320cfa715e99acde94143bc 457 Hamap MF_01603 Bifunctional protein HldE [hldE]. 1 457 40.123 T 11-11-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 WS_RS03305 053dce739320cfa715e99acde94143bc 457 Gene3D G3DSA:3.40.1190.20 1 299 7.0E-58 T 11-11-2016 IPR029056 Ribokinase-like WS_RS03305 053dce739320cfa715e99acde94143bc 457 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 318 455 1.4E-61 T 11-11-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 WS_RS03305 053dce739320cfa715e99acde94143bc 457 Pfam PF01467 Cytidylyltransferase-like 332 422 9.3E-15 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 WS_RS06510 4b290698137cd7c61cfd29bf644fa115 390 SUPERFAMILY SSF53098 229 385 5.77E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06510 4b290698137cd7c61cfd29bf644fa115 390 Gene3D G3DSA:1.10.10.10 7 68 2.1E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS06510 4b290698137cd7c61cfd29bf644fa115 390 SUPERFAMILY SSF46689 7 84 1.38E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS06510 4b290698137cd7c61cfd29bf644fa115 390 Gene3D G3DSA:3.30.420.10 224 379 1.2E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS06510 4b290698137cd7c61cfd29bf644fa115 390 Pfam PF00665 Integrase core domain 229 340 3.7E-30 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS06510 4b290698137cd7c61cfd29bf644fa115 390 Pfam PF13276 HTH-like domain 144 199 9.4E-11 T 11-11-2016 IPR025948 HTH-like domain WS_RS06510 4b290698137cd7c61cfd29bf644fa115 390 Pfam PF01527 Transposase 8 84 7.4E-9 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 WS_RS01790 7c8361e8b81b260750ce11905ed2ab46 195 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 88 187 9.6E-28 T 11-11-2016 IPR003744 Protein of unknown function DUF165 WS_RS01790 7c8361e8b81b260750ce11905ed2ab46 195 Pfam PF02592 Putative vitamin uptake transporter 47 182 6.0E-32 T 11-11-2016 IPR003744 Protein of unknown function DUF165 WS_RS09835 070bc6b12d4e85bbfc72d543fe452452 246 SUPERFAMILY SSF56300 14 233 4.97E-15 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS09835 070bc6b12d4e85bbfc72d543fe452452 246 Gene3D G3DSA:3.60.21.10 186 239 1.7E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS09835 070bc6b12d4e85bbfc72d543fe452452 246 Gene3D G3DSA:3.60.21.10 14 129 1.7E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS09835 070bc6b12d4e85bbfc72d543fe452452 246 Pfam PF00149 Calcineurin-like phosphoesterase 15 203 2.6E-7 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 WS_RS01855 56639a7ae0a067eddf5848cedd2401de 303 Pfam PF04055 Radical SAM superfamily 28 184 2.7E-12 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS01855 56639a7ae0a067eddf5848cedd2401de 303 SMART SM00729 19 236 0.0067 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 WS_RS01855 56639a7ae0a067eddf5848cedd2401de 303 SUPERFAMILY SSF102114 28 253 2.49E-22 T 11-11-2016 WS_RS01855 56639a7ae0a067eddf5848cedd2401de 303 Pfam PF13353 4Fe-4S single cluster domain 27 120 5.8E-5 T 11-11-2016 WS_RS01855 56639a7ae0a067eddf5848cedd2401de 303 Gene3D G3DSA:3.20.20.70 27 231 3.0E-23 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 Gene3D G3DSA:3.40.640.10 65 332 6.0E-81 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 PIRSF PIRSF000521 21 431 9.1E-28 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 SUPERFAMILY SSF53383 10 429 3.33E-119 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 Pfam PF00202 Aminotransferase class-III 24 428 8.1E-110 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 428 5.6E-159 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 Gene3D G3DSA:3.90.1150.10 4 64 8.0E-52 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS01165 e15c9fb6970b87220190135dff2f0499 432 Gene3D G3DSA:3.90.1150.10 335 430 8.0E-52 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS06200 31f8acc7a6e90ad3dc67b58d8f51d721 176 SUPERFAMILY SSF56235 2 174 2.65E-50 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS06200 31f8acc7a6e90ad3dc67b58d8f51d721 176 PIRSF PIRSF039093 1 176 1.4E-77 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 WS_RS06200 31f8acc7a6e90ad3dc67b58d8f51d721 176 Gene3D G3DSA:3.60.20.10 5 175 1.9E-73 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS06200 31f8acc7a6e90ad3dc67b58d8f51d721 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 175 8.5E-75 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 WS_RS06200 31f8acc7a6e90ad3dc67b58d8f51d721 176 Pfam PF00227 Proteasome subunit 2 173 1.4E-21 T 11-11-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 WS_RS06200 31f8acc7a6e90ad3dc67b58d8f51d721 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 38.859 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 327 507 9.0E-72 T 11-11-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 PRINTS PR00701 60kDa inner membrane protein signature 436 458 3.4E-40 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 PRINTS PR00701 60kDa inner membrane protein signature 298 318 3.4E-40 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 PRINTS PR00701 60kDa inner membrane protein signature 389 412 3.4E-40 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 PRINTS PR00701 60kDa inner membrane protein signature 473 496 3.4E-40 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 1 509 21.342 T 11-11-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 PRINTS PR01900 YidC translocation/secretion protein signature 313 329 6.0E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 PRINTS PR01900 YidC translocation/secretion protein signature 462 486 6.0E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 PRINTS PR01900 YidC translocation/secretion protein signature 442 457 6.0E-27 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 Pfam PF02096 60Kd inner membrane protein 328 507 1.8E-64 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 Pfam PF14849 YidC periplasmic domain 72 316 2.3E-9 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal WS_RS06160 e3f00ca3884613a84cfa81b0ee8694d8 525 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 2 326 1.3E-46 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal WS_RS05600 8e440290b5be0108ca1dc9861b566649 214 Pfam PF03358 NADPH-dependent FMN reductase 1 160 4.7E-31 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 WS_RS05600 8e440290b5be0108ca1dc9861b566649 214 Gene3D G3DSA:3.40.50.360 1 185 5.5E-41 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS05600 8e440290b5be0108ca1dc9861b566649 214 SUPERFAMILY SSF52218 1 193 4.5E-46 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS07915 67f593251ae5e13f9f35e241a483b6d1 121 Gene3D G3DSA:2.40.40.20 1 119 1.4E-55 T 11-11-2016 WS_RS07915 67f593251ae5e13f9f35e241a483b6d1 121 SUPERFAMILY SSF50692 1 119 9.32E-50 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS07915 67f593251ae5e13f9f35e241a483b6d1 121 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 121 69.655 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 WS_RS07915 67f593251ae5e13f9f35e241a483b6d1 121 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 90 4.0E-44 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 WS_RS07915 67f593251ae5e13f9f35e241a483b6d1 121 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 2.7E-53 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 WS_RS07915 67f593251ae5e13f9f35e241a483b6d1 121 PIRSF PIRSF006246 1 121 1.9E-53 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 WS_RS07915 67f593251ae5e13f9f35e241a483b6d1 121 Pfam PF02261 Aspartate decarboxylase 1 114 4.6E-53 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 SUPERFAMILY SSF46894 141 233 3.97E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 Gene3D G3DSA:3.40.50.2300 7 130 1.2E-34 T 11-11-2016 WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 Pfam PF00072 Response regulator receiver domain 14 121 2.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 SMART SM00448 10 120 3.8E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 SUPERFAMILY SSF52172 7 129 1.42E-35 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.8E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 Gene3D G3DSA:1.10.10.10 140 233 9.4E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS07225 33da86f47b795e8311e42e239a82e7e2 235 SMART SM00862 157 233 9.8E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 SUPERFAMILY SSF89095 295 398 2.35E-27 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 Pfam PF02637 GatB domain 326 471 1.8E-44 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 472 37.629 T 11-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 Pfam PF02934 GatB/GatE catalytic domain 4 287 1.9E-114 T 11-11-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 SUPERFAMILY SSF55931 3 292 1.5E-121 T 11-11-2016 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 140 154 - T 11-11-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 471 7.4E-189 T 11-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 WS_RS09430 8f0f6393aecd438b6762684ce1232840 472 SMART SM00845 326 471 3.7E-65 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 WS_RS07655 2ff0a0aca542285cfaa2c467d8c7d470 267 SMART SM00271 201 264 6.0E-5 T 11-11-2016 IPR001623 DnaJ domain WS_RS07655 2ff0a0aca542285cfaa2c467d8c7d470 267 Pfam PF00226 DnaJ domain 205 260 1.0E-7 T 11-11-2016 IPR001623 DnaJ domain WS_RS07655 2ff0a0aca542285cfaa2c467d8c7d470 267 SUPERFAMILY SSF46565 205 260 1.24E-11 T 11-11-2016 IPR001623 DnaJ domain WS_RS07655 2ff0a0aca542285cfaa2c467d8c7d470 267 Gene3D G3DSA:1.10.287.110 206 262 1.7E-9 T 11-11-2016 IPR001623 DnaJ domain WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 5.8E-23 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 5.8E-23 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 5.8E-23 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 5.8E-23 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.1E-7 T 11-11-2016 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 2.1E-7 T 11-11-2016 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.1E-7 T 11-11-2016 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.1E-7 T 11-11-2016 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 441 1.0E-168 T 11-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 SMART SM00998 349 441 1.6E-34 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 SUPERFAMILY SSF48557 3 441 1.12E-128 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 Gene3D G3DSA:1.10.275.10 3 90 9.1E-34 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 Pfam PF00206 Lyase 7 284 1.4E-52 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 440 3.3E-24 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 Gene3D G3DSA:1.20.200.10 91 355 1.7E-86 T 11-11-2016 WS_RS02050 7a0b38f9e9d4b08f4c43903626d7b524 442 Gene3D G3DSA:1.10.40.30 356 441 2.6E-32 T 11-11-2016 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 SUPERFAMILY SSF53850 87 270 7.06E-55 T 11-11-2016 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 Gene3D G3DSA:3.40.190.10 84 171 8.5E-29 T 11-11-2016 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 PIRSF PIRSF001500 1 354 2.1E-123 T 11-11-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 Gene3D G3DSA:1.20.59.10 1 83 1.3E-20 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 SUPERFAMILY SSF55021 258 352 4.93E-18 T 11-11-2016 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 Gene3D G3DSA:3.30.70.260 269 352 1.2E-20 T 11-11-2016 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 SMART SM00830 7 86 7.1E-26 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 Pfam PF00800 Prephenate dehydratase 88 263 7.6E-59 T 11-11-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 SUPERFAMILY SSF48600 1 84 1.01E-19 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 Pfam PF01817 Chorismate mutase type II 7 83 5.7E-22 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 Gene3D G3DSA:3.40.190.10 172 251 3.4E-25 T 11-11-2016 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 303 310 - T 11-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 239 261 - T 11-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 WS_RS01655 71ac39840b3e745c4b2cad2c38582fb4 355 TIGRFAM TIGR01807 CM_P2: chorismate mutase 3 76 2.2E-25 T 11-11-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 WS_RS00235 8061b8ef72d347ee171b84efecd59028 244 Gene3D G3DSA:3.40.630.30 57 212 1.4E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00235 8061b8ef72d347ee171b84efecd59028 244 SUPERFAMILY SSF55729 58 216 4.93E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 Gene3D G3DSA:3.30.70.260 341 410 4.0E-8 T 11-11-2016 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 Gene3D G3DSA:3.30.360.10 143 292 5.3E-56 T 11-11-2016 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 Pfam PF01842 ACT domain 342 406 1.3E-9 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 177 199 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 PIRSF PIRSF000098 1 419 4.3E-155 T 11-11-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 Pfam PF00742 Homoserine dehydrogenase 131 309 2.1E-61 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 108 2.0E-13 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 Gene3D G3DSA:3.40.50.720 1 142 2.0E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 SUPERFAMILY SSF55347 131 296 2.42E-51 T 11-11-2016 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 SUPERFAMILY SSF55021 340 411 1.75E-12 T 11-11-2016 WS_RS02205 78fdf4fd332488458aa3261af7ffcad9 419 SUPERFAMILY SSF51735 1 152 2.18E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS07260 859116e59d93abf4aaaa4e6f1f644a93 277 PIRSF PIRSF012524 1 276 1.5E-55 T 11-11-2016 IPR014464 Conserved virulence factor B WS_RS07260 859116e59d93abf4aaaa4e6f1f644a93 277 Pfam PF13509 S1 domain 3 63 2.4E-22 T 11-11-2016 WS_RS07290 201512121337119b021b4ee1fb76aef5 168 Gene3D G3DSA:3.10.129.10 20 166 4.4E-58 T 11-11-2016 IPR029069 HotDog domain WS_RS07290 201512121337119b021b4ee1fb76aef5 168 Pfam PF03061 Thioesterase superfamily 37 110 9.1E-15 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 WS_RS07290 201512121337119b021b4ee1fb76aef5 168 SUPERFAMILY SSF54637 17 164 2.01E-44 T 11-11-2016 IPR029069 HotDog domain WS_RS09705 303848006d5ba25c3c36ca4833ec274c 215 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 214 33.606 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 WS_RS09705 303848006d5ba25c3c36ca4833ec274c 215 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 213 6.4E-72 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 WS_RS09705 303848006d5ba25c3c36ca4833ec274c 215 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 213 1.1E-75 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 WS_RS09705 303848006d5ba25c3c36ca4833ec274c 215 Gene3D G3DSA:3.40.1180.10 1 214 8.4E-75 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 WS_RS09705 303848006d5ba25c3c36ca4833ec274c 215 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 159 176 - T 11-11-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 WS_RS09705 303848006d5ba25c3c36ca4833ec274c 215 SUPERFAMILY SSF64005 1 209 4.45E-70 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 ProSitePatterns PS00450 Aconitase family signature 1. 295 311 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 Pfam PF00330 Aconitase family (aconitate hydratase) 7 414 2.5E-97 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 422 48.092 T 11-11-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 Gene3D G3DSA:3.40.1060.10 149 273 2.1E-31 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 Gene3D G3DSA:3.30.499.10 1 148 5.4E-37 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 SUPERFAMILY SSF53732 1 421 9.81E-141 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 420 1.9E-162 T 11-11-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 4 422 2.7E-189 T 11-11-2016 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 420 1.0E-175 T 11-11-2016 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 Gene3D G3DSA:3.30.499.10 275 421 7.0E-54 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 PRINTS PR00415 Aconitase family signature 113 126 1.0E-23 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 PRINTS PR00415 Aconitase family signature 127 142 1.0E-23 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 PRINTS PR00415 Aconitase family signature 299 310 1.0E-23 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 PRINTS PR00415 Aconitase family signature 189 202 1.0E-23 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 PRINTS PR00415 Aconitase family signature 355 368 1.0E-23 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 PRINTS PR00415 Aconitase family signature 203 216 1.0E-23 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS02740 7f4f19aed08ddd4bc1e4f22744a5f15b 422 ProSitePatterns PS01244 Aconitase family signature 2. 355 368 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 WS_RS03705 7ccd9345e4965be42d88929e6c6a0279 468 SUPERFAMILY SSF56954 3 460 1.57E-111 T 11-11-2016 WS_RS03705 7ccd9345e4965be42d88929e6c6a0279 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 459 1.5E-104 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 WS_RS03705 7ccd9345e4965be42d88929e6c6a0279 468 Pfam PF02321 Outer membrane efflux protein 58 247 4.7E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS03705 7ccd9345e4965be42d88929e6c6a0279 468 Pfam PF02321 Outer membrane efflux protein 275 457 9.1E-30 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS03705 7ccd9345e4965be42d88929e6c6a0279 468 Gene3D G3DSA:1.20.1600.10 49 461 5.0E-111 T 11-11-2016 WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 Gene3D G3DSA:3.30.1390.10 52 124 6.6E-32 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.612 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 3.0E-49 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 SUPERFAMILY SSF48300 3 60 3.4E-16 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 Gene3D G3DSA:1.20.5.710 2 51 4.3E-21 T 11-11-2016 WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 SUPERFAMILY SSF54736 53 124 2.62E-24 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 4.2E-29 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.5E-18 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02310 fab77d4291e2886a17d8298ba9dde7cb 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 100 6.0E-16 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02605 5a45ac99107f2da1ca5c545f307b1661 387 Gene3D G3DSA:3.40.50.300 120 357 4.2E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02605 5a45ac99107f2da1ca5c545f307b1661 387 SMART SM00382 140 265 0.0049 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02605 5a45ac99107f2da1ca5c545f307b1661 387 Pfam PF00437 Type II/IV secretion system protein 95 288 3.7E-43 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 WS_RS02605 5a45ac99107f2da1ca5c545f307b1661 387 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 26 361 5.9E-125 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 WS_RS02605 5a45ac99107f2da1ca5c545f307b1661 387 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 211 225 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 WS_RS02605 5a45ac99107f2da1ca5c545f307b1661 387 SUPERFAMILY SSF52540 23 354 4.28E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08515 cfecda75f5c9d56407c8053193b239b2 167 Gene3D G3DSA:3.20.19.10 3 160 7.6E-35 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel WS_RS08515 cfecda75f5c9d56407c8053193b239b2 167 Pfam PF00694 Aconitase C-terminal domain 52 107 4.2E-21 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 WS_RS08515 cfecda75f5c9d56407c8053193b239b2 167 SUPERFAMILY SSF52016 2 162 9.03E-52 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel WS_RS08515 cfecda75f5c9d56407c8053193b239b2 167 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 6 159 5.4E-63 T 11-11-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 WS_RS08515 cfecda75f5c9d56407c8053193b239b2 167 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 4 163 38.544 T 11-11-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 SUPERFAMILY SSF90123 31 333 2.49E-37 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 Gene3D G3DSA:3.40.50.300 343 583 3.3E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 SMART SM00382 369 555 2.4E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 SUPERFAMILY SSF52540 336 579 2.61E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 Gene3D G3DSA:1.20.1560.10 41 327 3.7E-32 T 11-11-2016 WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 Pfam PF00005 ABC transporter 360 509 3.8E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS06055 c1d6841ba4d99650b0483e699b1b33eb 594 Pfam PF00664 ABC transporter transmembrane region 67 299 8.9E-16 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS07155 eb65c35b7ec8bf4df27114d27392a88d 217 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 138 1.1E-11 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 WS_RS07155 eb65c35b7ec8bf4df27114d27392a88d 217 SUPERFAMILY SSF48150 19 204 4.4E-39 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS07155 eb65c35b7ec8bf4df27114d27392a88d 217 SMART SM00478 40 187 1.6E-16 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 WS_RS07155 eb65c35b7ec8bf4df27114d27392a88d 217 Gene3D G3DSA:1.10.1670.10 126 211 2.3E-32 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 WS_RS07155 eb65c35b7ec8bf4df27114d27392a88d 217 Gene3D G3DSA:1.10.340.30 24 125 9.8E-28 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS10095 254d36c8f887b71da86a529c2e27ab43 323 Pfam PF04055 Radical SAM superfamily 32 166 6.9E-12 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS10095 254d36c8f887b71da86a529c2e27ab43 323 Gene3D G3DSA:3.20.20.70 24 316 4.0E-28 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS10095 254d36c8f887b71da86a529c2e27ab43 323 Pfam PF13353 4Fe-4S single cluster domain 35 141 7.1E-6 T 11-11-2016 WS_RS10095 254d36c8f887b71da86a529c2e27ab43 323 Pfam PF12345 Protein of unknown function (DUF3641) 185 316 2.5E-46 T 11-11-2016 IPR024521 Domain of unknown function DUF3641 WS_RS10095 254d36c8f887b71da86a529c2e27ab43 323 SUPERFAMILY SSF102114 25 314 8.63E-42 T 11-11-2016 WS_RS10095 254d36c8f887b71da86a529c2e27ab43 323 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 22 317 1.4E-125 T 11-11-2016 IPR026351 Radical SAM/Cys-rich domain protein WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 SUPERFAMILY SSF160996 186 325 1.44E-25 T 11-11-2016 WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 Gene3D G3DSA:2.40.30.10 185 253 4.0E-20 T 11-11-2016 WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 SUPERFAMILY SSF51905 1 185 1.67E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 SUPERFAMILY SSF51905 322 381 1.67E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 377 5.9E-111 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 Pfam PF03486 HI0933-like protein 5 377 7.2E-101 T 11-11-2016 WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 Gene3D G3DSA:3.50.50.60 324 381 5.3E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS05095 c578ced9e81fbb6002de636d6ba04497 394 Gene3D G3DSA:3.50.50.60 3 183 5.3E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS02880 88268bb5b3d6ee04168b60dacbe82ccc 158 Gene3D G3DSA:1.10.10.10 90 153 3.9E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS02880 88268bb5b3d6ee04168b60dacbe82ccc 158 Pfam PF08281 Sigma-70, region 4 97 146 3.1E-14 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS02880 88268bb5b3d6ee04168b60dacbe82ccc 158 SUPERFAMILY SSF88946 3 84 9.02E-10 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS02880 88268bb5b3d6ee04168b60dacbe82ccc 158 Pfam PF04542 Sigma-70 region 2 4 65 2.0E-6 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS02880 88268bb5b3d6ee04168b60dacbe82ccc 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 151 1.7E-21 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS02880 88268bb5b3d6ee04168b60dacbe82ccc 158 SUPERFAMILY SSF88659 69 153 4.49E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS02880 88268bb5b3d6ee04168b60dacbe82ccc 158 Gene3D G3DSA:1.10.1740.10 2 65 6.6E-11 T 11-11-2016 WS_RS04985 3d3f3d9c15b7f7ee747f3bbb56f22dbf 528 SUPERFAMILY SSF51735 388 517 6.43E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS04985 3d3f3d9c15b7f7ee747f3bbb56f22dbf 528 Pfam PF00999 Sodium/hydrogen exchanger family 6 359 1.3E-57 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 WS_RS04985 3d3f3d9c15b7f7ee747f3bbb56f22dbf 528 Pfam PF02254 TrkA-N domain 390 504 2.6E-19 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 WS_RS04985 3d3f3d9c15b7f7ee747f3bbb56f22dbf 528 Gene3D G3DSA:3.40.50.720 386 517 8.3E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 Gene3D G3DSA:3.30.565.10 443 586 1.7E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 Pfam PF14827 Double sensory domain of two-component sensor kinase 43 277 5.8E-39 T 11-11-2016 IPR029150 Double Cache domain 3 WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 SUPERFAMILY SSF47384 363 432 6.67E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 584 4.0E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 SMART SM00387 478 586 2.7E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 547 6.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 568 6.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 533 6.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 586 6.9E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS10600 4e51aa7796f1a6cd87b811df00e954f0 586 SUPERFAMILY SSF55874 439 586 6.68E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS00050 9d1cba56857a55d427a29f408b1c4e37 371 Gene3D G3DSA:1.10.760.10 211 307 5.6E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00050 9d1cba56857a55d427a29f408b1c4e37 371 SUPERFAMILY SSF46626 84 196 1.16E-22 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00050 9d1cba56857a55d427a29f408b1c4e37 371 SUPERFAMILY SSF46626 212 309 7.48E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00050 9d1cba56857a55d427a29f408b1c4e37 371 Gene3D G3DSA:1.10.760.10 77 197 7.9E-30 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00050 9d1cba56857a55d427a29f408b1c4e37 371 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 217 304 2.1E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS00910 c2ee7af49cd10afdf527863e2daf3574 488 Gene3D G3DSA:1.20.210.10 10 484 2.7E-67 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS00910 c2ee7af49cd10afdf527863e2daf3574 488 SUPERFAMILY SSF81442 9 485 9.16E-109 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS00910 c2ee7af49cd10afdf527863e2daf3574 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 9.8E-106 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS00910 c2ee7af49cd10afdf527863e2daf3574 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 WS_RS00910 c2ee7af49cd10afdf527863e2daf3574 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 486 9.5E-226 T 11-11-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 WS_RS07605 082b2f5af7d5f4bd7e32923d7b56ba52 1409 TIGRFAM TIGR03031 cas_csx12: CRISPR system subtype II-B RNA-guided endonuclease Cas9/Csx12 5 778 0.0 T 11-11-2016 IPR013492 CRISPR system subtype II-B RNA-guided endonuclease Cas9/Csx12 WS_RS07605 082b2f5af7d5f4bd7e32923d7b56ba52 1409 Pfam PF01844 HNH endonuclease 739 788 2.8E-5 T 11-11-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 WS_RS02060 5de0b13350d0333d77c0a5c3ad484c5c 209 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 206 2.7E-60 T 11-11-2016 WS_RS02060 5de0b13350d0333d77c0a5c3ad484c5c 209 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 WS_RS02060 5de0b13350d0333d77c0a5c3ad484c5c 209 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 2.9E-71 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 WS_RS02060 5de0b13350d0333d77c0a5c3ad484c5c 209 SUPERFAMILY SSF53335 18 205 1.22E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02060 5de0b13350d0333d77c0a5c3ad484c5c 209 Gene3D G3DSA:3.40.50.150 15 207 4.9E-53 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 Pfam PF01022 Bacterial regulatory protein, arsR family 20 67 4.2E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 46 3.3E-14 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 3.3E-14 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.3E-14 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 3.3E-14 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 SMART SM00418 13 89 2.1E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 SUPERFAMILY SSF46785 9 83 9.73E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03685 320b5e20cf16ed420dadcfde0e4a3207 108 Gene3D G3DSA:1.10.10.10 8 82 1.6E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Pfam PF13361 UvrD-like helicase C-terminal domain 267 652 1.0E-48 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 99 2.0E-25 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Pfam PF00580 UvrD/REP helicase N-terminal domain 160 260 7.5E-23 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Gene3D G3DSA:3.40.50.300 269 375 4.4E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Gene3D G3DSA:3.40.50.300 587 668 4.4E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 SUPERFAMILY SSF52540 475 666 3.72E-114 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 SUPERFAMILY SSF52540 4 413 3.72E-114 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Gene3D G3DSA:3.40.50.300 4 138 4.1E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Gene3D G3DSA:3.40.50.300 171 264 4.1E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07775 cb28348ad576de6ecc55c8e3fe10c0c4 675 Gene3D G3DSA:1.10.486.10 376 574 2.4E-4 T 11-11-2016 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 Pfam PF00551 Formyl transferase 7 169 1.2E-30 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 291 2.2E-61 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 SUPERFAMILY SSF50486 198 298 1.18E-18 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 Pfam PF02911 Formyl transferase, C-terminal domain 197 290 1.7E-16 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 SUPERFAMILY SSF53328 1 197 3.01E-46 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 Gene3D G3DSA:3.10.25.10 209 298 1.8E-17 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 293 27.236 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 WS_RS02495 aafb73d10ceebc975d2b07cf633de2c5 299 Gene3D G3DSA:3.40.50.170 1 198 1.7E-48 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS10450 28fff8177693517a4648750ede3795ba 353 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 351 2.8E-125 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 WS_RS10450 28fff8177693517a4648750ede3795ba 353 Gene3D G3DSA:3.20.20.70 3 351 7.8E-113 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS10450 28fff8177693517a4648750ede3795ba 353 SUPERFAMILY SSF51395 4 351 7.33E-93 T 11-11-2016 WS_RS10450 28fff8177693517a4648750ede3795ba 353 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 287 307 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 WS_RS10450 28fff8177693517a4648750ede3795ba 353 Pfam PF01180 Dihydroorotate dehydrogenase 51 335 5.2E-78 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 WS_RS10450 28fff8177693517a4648750ede3795ba 353 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 86 105 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 WS_RS10450 28fff8177693517a4648750ede3795ba 353 PIRSF PIRSF000164 14 352 1.3E-98 T 11-11-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 WS_RS04425 1d80cc969cecabc73536464e2875c356 298 Pfam PF12801 4Fe-4S binding domain 185 221 9.0E-5 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS04425 1d80cc969cecabc73536464e2875c356 298 Pfam PF12801 4Fe-4S binding domain 89 136 4.1E-13 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS04425 1d80cc969cecabc73536464e2875c356 298 Pfam PF12801 4Fe-4S binding domain 146 163 240.0 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS04425 1d80cc969cecabc73536464e2875c356 298 Gene3D G3DSA:3.30.70.20 201 294 1.2E-14 T 11-11-2016 WS_RS04425 1d80cc969cecabc73536464e2875c356 298 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 33 291 9.5E-108 T 11-11-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 WS_RS04425 1d80cc969cecabc73536464e2875c356 298 SUPERFAMILY SSF54862 102 150 4.54E-22 T 11-11-2016 WS_RS04425 1d80cc969cecabc73536464e2875c356 298 SUPERFAMILY SSF54862 201 293 4.54E-22 T 11-11-2016 WS_RS04480 05ce0726faf8a77fc2c63beac466ffe3 230 SUPERFAMILY SSF52172 9 184 4.98E-33 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04480 05ce0726faf8a77fc2c63beac466ffe3 230 Gene3D G3DSA:1.10.10.10 157 224 3.3E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04480 05ce0726faf8a77fc2c63beac466ffe3 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 225 8.1E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04480 05ce0726faf8a77fc2c63beac466ffe3 230 Pfam PF00072 Response regulator receiver domain 11 120 2.8E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04480 05ce0726faf8a77fc2c63beac466ffe3 230 Gene3D G3DSA:3.40.50.2300 8 156 8.0E-32 T 11-11-2016 WS_RS04480 05ce0726faf8a77fc2c63beac466ffe3 230 SMART SM00862 156 226 1.0E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04480 05ce0726faf8a77fc2c63beac466ffe3 230 SMART SM00448 9 120 3.4E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS07960 bfdd20336838cb1d4f4c98a9bd131db9 116 Gene3D G3DSA:3.90.1030.10 1 116 7.7E-45 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS07960 bfdd20336838cb1d4f4c98a9bd131db9 116 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 1.6E-45 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS07960 bfdd20336838cb1d4f4c98a9bd131db9 116 SUPERFAMILY SSF64263 1 116 6.8E-44 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS07960 bfdd20336838cb1d4f4c98a9bd131db9 116 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.588 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS07960 bfdd20336838cb1d4f4c98a9bd131db9 116 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-31 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS05315 a233ffa30c0492843dba653fe4b7879b 224 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 160 4.5E-23 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain WS_RS05315 a233ffa30c0492843dba653fe4b7879b 224 SUPERFAMILY SSF52540 1 212 8.44E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05315 a233ffa30c0492843dba653fe4b7879b 224 Gene3D G3DSA:3.40.50.300 1 215 3.7E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05315 a233ffa30c0492843dba653fe4b7879b 224 PIRSF PIRSF009320 1 220 3.1E-40 T 11-11-2016 WS_RS07335 06c75371031e12f69725f319595dd6c6 275 SMART SM00382 27 231 2.1E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS07335 06c75371031e12f69725f319595dd6c6 275 Gene3D G3DSA:3.40.50.300 1 237 7.4E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07335 06c75371031e12f69725f319595dd6c6 275 Pfam PF00005 ABC transporter 18 174 1.2E-36 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS07335 06c75371031e12f69725f319595dd6c6 275 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 2.6E-102 T 11-11-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 WS_RS07335 06c75371031e12f69725f319595dd6c6 275 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS07335 06c75371031e12f69725f319595dd6c6 275 SUPERFAMILY SSF52540 2 235 9.08E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02150 1c545f38578ccc2f2c9692b39dfd89db 544 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 14 395 1.2E-53 T 11-11-2016 IPR003776 YcaO-like domain WS_RS02150 1c545f38578ccc2f2c9692b39dfd89db 544 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 382 3.3E-61 T 11-11-2016 IPR003776 YcaO-like domain WS_RS05695 ff08a88512c305200f6211cc6cc9679a 144 Pfam PF01814 Hemerythrin HHE cation binding domain 6 126 7.2E-21 T 11-11-2016 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 WS_RS05695 ff08a88512c305200f6211cc6cc9679a 144 Gene3D G3DSA:1.20.120.520 6 140 6.5E-20 T 11-11-2016 WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 Pfam PF13519 von Willebrand factor type A domain 88 196 3.7E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 SMART SM00327 84 255 0.0012 T 11-11-2016 IPR002035 von Willebrand factor, type A WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 SUPERFAMILY SSF53300 88 228 8.7E-13 T 11-11-2016 IPR002035 von Willebrand factor, type A WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 Pfam PF13432 Tetratricopeptide repeat 399 428 0.019 T 11-11-2016 WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 SUPERFAMILY SSF48452 332 441 5.55E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 SMART SM00028 359 392 6.0E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 SMART SM00028 394 427 0.0063 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 Pfam PF14559 Tetratricopeptide repeat 338 394 4.2E-8 T 11-11-2016 WS_RS02095 48d7dd7506182590ab51227786fbfb87 494 Gene3D G3DSA:1.25.40.10 332 436 5.1E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS04835 bfe2848902c8d79296ba65954645c925 130 SUPERFAMILY SSF102712 1 125 2.75E-30 T 11-11-2016 WS_RS04835 bfe2848902c8d79296ba65954645c925 130 Pfam PF14464 Prokaryotic homologs of the JAB domain 6 109 1.2E-25 T 11-11-2016 IPR028090 JAB domain, prokaryotic WS_RS04835 bfe2848902c8d79296ba65954645c925 130 Gene3D G3DSA:3.40.140.10 1 129 1.2E-36 T 11-11-2016 WS_RS04835 bfe2848902c8d79296ba65954645c925 130 SMART SM00232 1 127 9.0E-14 T 11-11-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 WS_RS02510 41b45b115d64b1924bf9cb736de19c59 296 SMART SM00470 36 126 2.3E-32 T 11-11-2016 IPR003115 ParB/Sulfiredoxin WS_RS02510 41b45b115d64b1924bf9cb736de19c59 296 SUPERFAMILY SSF110849 36 128 3.4E-27 T 11-11-2016 IPR003115 ParB/Sulfiredoxin WS_RS02510 41b45b115d64b1924bf9cb736de19c59 296 Gene3D G3DSA:3.90.1530.10 33 132 5.6E-37 T 11-11-2016 WS_RS02510 41b45b115d64b1924bf9cb736de19c59 296 SUPERFAMILY SSF109709 119 228 1.78E-32 T 11-11-2016 WS_RS02510 41b45b115d64b1924bf9cb736de19c59 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 36 210 9.0E-58 T 11-11-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 WS_RS02510 41b45b115d64b1924bf9cb736de19c59 296 Pfam PF02195 ParB-like nuclease domain 37 126 9.0E-24 T 11-11-2016 IPR003115 ParB/Sulfiredoxin WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 SUPERFAMILY SSF56425 215 329 3.89E-32 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 SUPERFAMILY SSF51905 333 388 1.41E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 SUPERFAMILY SSF51905 3 242 1.41E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 Pfam PF00890 FAD binding domain 4 370 4.3E-78 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 SUPERFAMILY SSF46977 411 476 3.27E-11 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 477 3.3E-140 T 11-11-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 Gene3D G3DSA:3.90.700.10 221 325 5.0E-29 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 Gene3D G3DSA:3.50.50.60 3 220 5.2E-82 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 Gene3D G3DSA:3.50.50.60 326 386 5.2E-82 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07570 485c6bbd843b665619f89aecd62a139f 479 Gene3D G3DSA:1.20.58.100 409 476 1.1E-8 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 Gene3D G3DSA:3.30.420.40 266 320 5.4E-30 T 11-11-2016 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 Gene3D G3DSA:3.30.420.40 163 189 5.4E-30 T 11-11-2016 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 Pfam PF06723 MreB/Mbl protein 12 339 2.6E-144 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 4.1E-156 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 SUPERFAMILY SSF53067 10 151 2.09E-38 T 11-11-2016 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 Gene3D G3DSA:3.90.640.10 190 262 7.2E-30 T 11-11-2016 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 SUPERFAMILY SSF53067 152 336 2.55E-46 T 11-11-2016 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 Gene3D G3DSA:3.30.420.40 11 162 2.8E-46 T 11-11-2016 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 4.4E-63 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 4.4E-63 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 4.4E-63 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 4.4E-63 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS00270 60ac09aafa8a400d00f157b952ada065 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 4.4E-63 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 WS_RS06350 e3184a084c2b395fde665400cf902608 145 SUPERFAMILY SSF52821 11 135 4.18E-15 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS06350 e3184a084c2b395fde665400cf902608 145 SMART SM00450 32 139 1.1E-4 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS06350 e3184a084c2b395fde665400cf902608 145 Gene3D G3DSA:3.40.250.10 27 135 4.8E-14 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS06350 e3184a084c2b395fde665400cf902608 145 Pfam PF00581 Rhodanese-like domain 33 133 3.5E-9 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 160 3.1E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 Pfam PF02421 Ferrous iron transport protein B 6 158 2.5E-62 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 SUPERFAMILY SSF52540 4 164 1.8E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 Pfam PF07670 Nucleoside recognition 520 675 1.2E-38 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 Pfam PF07670 Nucleoside recognition 360 452 8.5E-14 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 Pfam PF07664 Ferrous iron transport protein B C terminus 463 515 8.4E-18 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 672 5.4E-195 T 11-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 WS_RS04585 2211cae4a9913d351fbae84f2f50a1d8 704 Gene3D G3DSA:3.40.50.300 2 181 3.6E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 SUPERFAMILY SSF51735 4 254 4.37E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 PIRSF PIRSF000094 1 258 1.8E-115 T 11-11-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 Gene3D G3DSA:3.40.50.720 5 199 2.6E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS02085 fc596f5873691e14f5ffc5e636b01f62 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.1E-83 T 11-11-2016 WS_RS09620 927181c306c1f0981798e747a4d1e8b9 281 SUPERFAMILY SSF103481 191 277 4.32E-7 T 11-11-2016 WS_RS09620 927181c306c1f0981798e747a4d1e8b9 281 Pfam PF00892 EamA-like transporter family 1 125 2.4E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS09620 927181c306c1f0981798e747a4d1e8b9 281 SUPERFAMILY SSF103481 30 126 4.32E-12 T 11-11-2016 WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 Gene3D G3DSA:3.40.190.10 220 258 7.1E-44 T 11-11-2016 WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 Gene3D G3DSA:3.40.190.10 33 113 7.1E-44 T 11-11-2016 WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 SUPERFAMILY SSF53850 1 258 2.81E-69 T 11-11-2016 WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 SMART SM00079 36 259 3.7E-5 T 11-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 11-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 Gene3D G3DSA:3.40.190.10 114 219 5.8E-14 T 11-11-2016 WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 SMART SM00062 36 259 1.0E-62 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS01370 879b145740c0ae75267bdf0726dcaa12 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 258 9.9E-62 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF WS_RS07620 546c173095caa37d3cd6844ab53ddea5 193 Pfam PF01930 Domain of unknown function DUF83 10 189 3.3E-16 T 11-11-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 WS_RS07620 546c173095caa37d3cd6844ab53ddea5 193 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 10 190 3.1E-27 T 11-11-2016 IPR013343 CRISPR-associated protein Cas4 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 680 1.3E-198 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 8.2E-32 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 8.2E-32 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 399 418 8.2E-32 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 8.2E-32 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 8.2E-32 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 546 4.3E-175 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS01045 9fb0157b49c8cd404e219473c16549ce 682 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 680 22.112 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09180 833c9ec5aa2e8353891745aa682d5ac8 686 Gene3D G3DSA:2.170.130.10 54 151 4.3E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS09180 833c9ec5aa2e8353891745aa682d5ac8 686 Pfam PF00593 TonB dependent receptor 435 684 5.2E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS09180 833c9ec5aa2e8353891745aa682d5ac8 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 139 1.5E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS09180 833c9ec5aa2e8353891745aa682d5ac8 686 SUPERFAMILY SSF56935 48 686 3.83E-87 T 11-11-2016 WS_RS09180 833c9ec5aa2e8353891745aa682d5ac8 686 Gene3D G3DSA:2.40.170.20 152 686 1.4E-72 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS09180 833c9ec5aa2e8353891745aa682d5ac8 686 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 669 686 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 SMART SM00028 71 104 7.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 SMART SM00028 142 175 28.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 SMART SM00028 108 141 46.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 Pfam PF13432 Tetratricopeptide repeat 114 166 9.6E-8 T 11-11-2016 WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 Gene3D G3DSA:1.25.40.10 67 183 1.4E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 Gene3D G3DSA:1.25.40.10 258 283 1.4E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 Pfam PF13176 Tetratricopeptide repeat 73 104 1.5E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 WS_RS08930 b634554074d78bd750a9066c9ec4afc8 351 SUPERFAMILY SSF48452 69 185 1.41E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 Pfam PF01568 Molydopterin dinucleotide binding domain 605 731 2.1E-22 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 Gene3D G3DSA:3.40.50.740 232 362 3.8E-40 T 11-11-2016 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 SUPERFAMILY SSF50692 575 739 2.69E-38 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 Gene3D G3DSA:2.40.40.20 427 457 3.5E-51 T 11-11-2016 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 Gene3D G3DSA:2.40.40.20 555 566 3.5E-51 T 11-11-2016 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 Gene3D G3DSA:2.40.40.20 600 739 3.5E-51 T 11-11-2016 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 Gene3D G3DSA:3.40.228.10 1 201 1.3E-72 T 11-11-2016 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 SUPERFAMILY SSF53706 1 389 1.83E-130 T 11-11-2016 WS_RS03535 4094d5f3483f40d7b1c343961f0a806a 739 Pfam PF00384 Molybdopterin oxidoreductase 2 355 1.2E-47 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 SMART SM00862 143 213 7.7E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 SMART SM00448 1 113 2.1E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 213 7.6E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 Gene3D G3DSA:1.10.10.10 146 214 2.0E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 SUPERFAMILY SSF52172 1 159 6.97E-31 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 Gene3D G3DSA:3.40.50.2300 1 145 1.7E-30 T 11-11-2016 WS_RS05775 82496d29f33ddae9554b052f1a16432b 216 SUPERFAMILY SSF46894 138 213 1.87E-15 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS03230 e9647945dcd3e6d788a8cb53e3ecb997 433 PIRSF PIRSF004539 1 433 9.2E-186 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 WS_RS03230 e9647945dcd3e6d788a8cb53e3ecb997 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 4.6E-213 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 WS_RS03230 e9647945dcd3e6d788a8cb53e3ecb997 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 4.8E-149 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 WS_RS01925 41ab9af4ab6d2f361838a138538eda92 369 Pfam PF02687 FtsX-like permease family 236 359 1.8E-10 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 Pfam PF00072 Response regulator receiver domain 4 114 3.7E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 Gene3D G3DSA:1.10.3210.10 152 340 3.6E-19 T 11-11-2016 IPR006674 HD domain WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 SMART SM00471 156 306 1.4E-9 T 11-11-2016 IPR003607 HD/PDEase domain WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 SUPERFAMILY SSF52172 2 141 2.28E-39 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 SUPERFAMILY SSF109604 133 335 5.14E-33 T 11-11-2016 WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 Pfam PF13487 HD domain 220 288 1.1E-17 T 11-11-2016 WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 SMART SM00448 1 114 4.3E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08135 15f08e20bdd70e996d748932b4fdb855 349 Gene3D G3DSA:3.40.50.2300 2 127 6.2E-39 T 11-11-2016 WS_RS03840 3953a6fed4225a4255d34c4c8a6052e5 143 SUPERFAMILY SSF51283 2 142 4.32E-51 T 11-11-2016 IPR029054 dUTPase-like WS_RS03840 3953a6fed4225a4255d34c4c8a6052e5 143 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 142 31.853 T 11-11-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 WS_RS03840 3953a6fed4225a4255d34c4c8a6052e5 143 Pfam PF00692 dUTPase 12 141 2.5E-33 T 11-11-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 WS_RS03840 3953a6fed4225a4255d34c4c8a6052e5 143 TIGRFAM TIGR00576 dut: dUTP diphosphatase 3 142 6.2E-56 T 11-11-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 WS_RS03840 3953a6fed4225a4255d34c4c8a6052e5 143 Gene3D G3DSA:2.70.40.10 2 142 3.0E-57 T 11-11-2016 IPR029054 dUTPase-like WS_RS02620 2260d7bab2c00349ac01ef76bc19984f 353 Gene3D G3DSA:3.40.50.300 103 346 1.2E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02620 2260d7bab2c00349ac01ef76bc19984f 353 Pfam PF00437 Type II/IV secretion system protein 10 264 5.3E-44 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 WS_RS02620 2260d7bab2c00349ac01ef76bc19984f 353 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 8 346 1.0E-134 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 WS_RS02620 2260d7bab2c00349ac01ef76bc19984f 353 SUPERFAMILY SSF52540 13 341 2.49E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10005 f645e43561f2caed77be031f3e592160 162 Pfam PF13118 Protein of unknown function (DUF3972) 9 130 2.9E-49 T 11-11-2016 IPR025002 Domain of unknown function DUF3972 WS_RS05185 40d64c988ea0a8c1b910ce5fb94fedd3 124 Gene3D G3DSA:1.20.120.160 4 101 2.5E-32 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS05185 40d64c988ea0a8c1b910ce5fb94fedd3 124 Pfam PF01627 Hpt domain 6 96 1.1E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS05185 40d64c988ea0a8c1b910ce5fb94fedd3 124 SUPERFAMILY SSF47226 4 102 3.01E-28 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS05185 40d64c988ea0a8c1b910ce5fb94fedd3 124 SMART SM00073 2 100 5.4E-19 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS05590 4864242dc72b1c6bb694f057a926ae84 112 Gene3D G3DSA:1.10.10.10 3 104 5.5E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05590 4864242dc72b1c6bb694f057a926ae84 112 SUPERFAMILY SSF46785 2 102 1.2E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05590 4864242dc72b1c6bb694f057a926ae84 112 SMART SM00418 15 95 0.0027 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS05590 4864242dc72b1c6bb694f057a926ae84 112 Pfam PF01638 HxlR-like helix-turn-helix 19 106 3.4E-31 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Pfam PF13426 PAS domain 156 257 2.4E-10 T 11-11-2016 IPR000014 PAS domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 441 1.6E-15 T 11-11-2016 IPR000160 GGDEF domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SMART SM00448 14 125 1.3E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Pfam PF00072 Response regulator receiver domain 16 125 2.0E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Gene3D G3DSA:3.20.20.450 462 693 1.1E-63 T 11-11-2016 IPR001633 EAL domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Gene3D G3DSA:3.30.450.20 151 257 2.9E-15 T 11-11-2016 WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SUPERFAMILY SSF55785 134 256 1.29E-13 T 11-11-2016 IPR000014 PAS domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Gene3D G3DSA:3.40.50.2300 13 143 2.2E-33 T 11-11-2016 WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 265 1.4E-15 T 11-11-2016 IPR000014 PAS domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SMART SM00267 286 447 8.7E-17 T 11-11-2016 IPR000160 GGDEF domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SUPERFAMILY SSF55073 302 444 2.2E-23 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Pfam PF00990 Diguanylate cyclase, GGDEF domain 298 440 1.6E-20 T 11-11-2016 IPR000160 GGDEF domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SMART SM00052 458 697 1.9E-51 T 11-11-2016 IPR001633 EAL domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SMART SM00091 146 210 1.8E-6 T 11-11-2016 IPR000014 PAS domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Gene3D G3DSA:3.30.70.270 298 450 9.9E-25 T 11-11-2016 WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SUPERFAMILY SSF141868 464 692 1.05E-65 T 11-11-2016 IPR001633 EAL domain WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 SUPERFAMILY SSF52172 12 137 2.7E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10520 acd7e904a58f78887e221f8920d8b1b6 698 Pfam PF00563 EAL domain 464 692 2.2E-61 T 11-11-2016 IPR001633 EAL domain WS_RS07705 f57dac9681126675e8d12e4ae4c72f49 345 Gene3D G3DSA:3.40.50.620 2 198 1.0E-61 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS07705 f57dac9681126675e8d12e4ae4c72f49 345 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 339 34.639 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 WS_RS07705 f57dac9681126675e8d12e4ae4c72f49 345 SUPERFAMILY SSF52402 1 232 5.51E-43 T 11-11-2016 WS_RS07705 f57dac9681126675e8d12e4ae4c72f49 345 Pfam PF03054 tRNA methyl transferase 1 338 3.6E-101 T 11-11-2016 WS_RS07705 f57dac9681126675e8d12e4ae4c72f49 345 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 338 1.7E-103 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 WS_RS07705 f57dac9681126675e8d12e4ae4c72f49 345 Gene3D G3DSA:2.30.30.280 204 261 2.6E-16 T 11-11-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 WS_RS07705 f57dac9681126675e8d12e4ae4c72f49 345 Gene3D G3DSA:2.40.30.10 274 340 1.8E-16 T 11-11-2016 WS_RS08435 1f40fea0c8dddfad310b8d1e26bb36d5 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 194 1.6E-43 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 WS_RS08435 1f40fea0c8dddfad310b8d1e26bb36d5 203 Gene3D G3DSA:3.90.950.10 2 198 2.5E-59 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like WS_RS08435 1f40fea0c8dddfad310b8d1e26bb36d5 203 Pfam PF01725 Ham1 family 3 190 3.1E-46 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 WS_RS08435 1f40fea0c8dddfad310b8d1e26bb36d5 203 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 197 45.417 T 11-11-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 WS_RS08435 1f40fea0c8dddfad310b8d1e26bb36d5 203 SUPERFAMILY SSF52972 2 196 4.45E-54 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like WS_RS07055 e801558fea4edec40447a6ecd80cce6f 505 Gene3D G3DSA:3.40.50.300 6 218 1.9E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07055 e801558fea4edec40447a6ecd80cce6f 505 SMART SM00487 33 229 2.4E-63 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain WS_RS07055 e801558fea4edec40447a6ecd80cce6f 505 SMART SM00490 265 346 4.1E-36 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS07055 e801558fea4edec40447a6ecd80cce6f 505 SUPERFAMILY SSF52540 84 366 4.14E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07055 e801558fea4edec40447a6ecd80cce6f 505 Pfam PF00271 Helicase conserved C-terminal domain 240 346 4.2E-31 T 11-11-2016 IPR001650 Helicase, C-terminal WS_RS07055 e801558fea4edec40447a6ecd80cce6f 505 Pfam PF00270 DEAD/DEAH box helicase 39 202 2.7E-46 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 WS_RS07055 e801558fea4edec40447a6ecd80cce6f 505 Gene3D G3DSA:3.40.50.300 219 379 2.4E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04845 50b859ed07c507a14a747f28e093b171 69 SUPERFAMILY SSF54285 3 67 1.23E-11 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp WS_RS04845 50b859ed07c507a14a747f28e093b171 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 68 1.3E-13 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis WS_RS04845 50b859ed07c507a14a747f28e093b171 69 Pfam PF02597 ThiS family 7 68 6.6E-10 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 WS_RS04845 50b859ed07c507a14a747f28e093b171 69 Gene3D G3DSA:3.10.20.30 1 68 1.5E-18 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS04465 a1f5a45d99160ded25fe74bd3e791503 212 Pfam PF01914 MarC family integral membrane protein 18 209 4.0E-35 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 WS_RS04325 581b15fb3724705e195be2f62e0c3748 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 286 2.2E-12 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain WS_RS04325 581b15fb3724705e195be2f62e0c3748 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 368 2.9E-76 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 WS_RS04325 581b15fb3724705e195be2f62e0c3748 378 SUPERFAMILY SSF111369 52 291 1.31E-68 T 11-11-2016 WS_RS04325 581b15fb3724705e195be2f62e0c3748 378 Gene3D G3DSA:2.40.50.100 64 97 1.3E-20 T 11-11-2016 WS_RS04325 581b15fb3724705e195be2f62e0c3748 378 Gene3D G3DSA:2.40.50.100 172 205 1.3E-20 T 11-11-2016 WS_RS05945 4639c82d051261debdd55eead206510c 400 TIGRFAM TIGR01499 folC: bifunctional protein FolC 37 385 1.1E-67 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 WS_RS05945 4639c82d051261debdd55eead206510c 400 SUPERFAMILY SSF53623 40 264 1.28E-48 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS05945 4639c82d051261debdd55eead206510c 400 Gene3D G3DSA:3.40.1190.10 7 261 2.3E-55 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS05945 4639c82d051261debdd55eead206510c 400 SUPERFAMILY SSF53244 272 386 1.78E-15 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS05945 4639c82d051261debdd55eead206510c 400 Gene3D G3DSA:3.90.190.20 272 388 2.2E-14 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 WS_RS05945 4639c82d051261debdd55eead206510c 400 Pfam PF08245 Mur ligase middle domain 47 181 7.1E-5 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 WS_RS03970 61739670878f1668dc3e0eda05df1555 734 Pfam PF02769 AIR synthase related protein, C-terminal domain 204 356 1.3E-31 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS03970 61739670878f1668dc3e0eda05df1555 734 SUPERFAMILY SSF55326 398 565 7.59E-52 T 11-11-2016 WS_RS03970 61739670878f1668dc3e0eda05df1555 734 SUPERFAMILY SSF56042 570 726 2.69E-28 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS03970 61739670878f1668dc3e0eda05df1555 734 Gene3D G3DSA:3.30.1330.10 416 560 2.9E-52 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS03970 61739670878f1668dc3e0eda05df1555 734 Gene3D G3DSA:3.30.1330.10 46 195 1.8E-47 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS03970 61739670878f1668dc3e0eda05df1555 734 PIRSF PIRSF001587 1 733 3.0E-298 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS03970 61739670878f1668dc3e0eda05df1555 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 453 558 2.1E-22 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS03970 61739670878f1668dc3e0eda05df1555 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 83 189 3.7E-22 T 11-11-2016 IPR016188 PurM-like, N-terminal domain WS_RS03970 61739670878f1668dc3e0eda05df1555 734 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 734 304.376 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS03970 61739670878f1668dc3e0eda05df1555 734 SUPERFAMILY SSF56042 202 426 2.09E-51 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS03970 61739670878f1668dc3e0eda05df1555 734 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 14 723 5.5E-281 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS03970 61739670878f1668dc3e0eda05df1555 734 SUPERFAMILY SSF55326 11 197 1.24E-48 T 11-11-2016 WS_RS03970 61739670878f1668dc3e0eda05df1555 734 Gene3D G3DSA:3.90.650.10 249 355 2.0E-4 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 SMART SM00387 410 536 1.9E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 533 1.5E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 SUPERFAMILY SSF47384 294 368 1.96E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 Gene3D G3DSA:3.30.565.10 375 538 2.1E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 2.5E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 2.5E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 2.5E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 WS_RS04970 742db80be4fba14a6cf10d6216d8a9ed 545 SUPERFAMILY SSF55874 368 536 1.57E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 Gene3D G3DSA:1.10.287.890 197 276 1.6E-22 T 11-11-2016 WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 285 5.4E-72 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 SUPERFAMILY SSF52540 3 140 2.1E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 Pfam PF01715 IPP transferase 37 277 9.1E-52 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 3 295 21.977 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 Gene3D G3DSA:3.40.50.300 2 168 2.3E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 SUPERFAMILY SSF52540 174 234 7.06E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09290 39a76e9286475b82018768b0ffe26e39 300 SUPERFAMILY SSF52540 3 49 7.06E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 SMART SM00388 175 237 1.7E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 373 6.8E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 SMART SM00387 279 386 3.2E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 Gene3D G3DSA:1.10.287.130 169 224 3.0E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 228 4.9E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 SUPERFAMILY SSF47384 166 226 7.85E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 SUPERFAMILY SSF55874 242 375 2.75E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06985 a6cf667838bc272ee557bf25b9f8e8ef 387 Gene3D G3DSA:3.30.565.10 240 376 7.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS06890 fe11506e705f2846e121b14fd96cc2ee 314 Pfam PF01867 CRISPR associated protein Cas1 8 240 2.6E-29 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 WS_RS06890 fe11506e705f2846e121b14fd96cc2ee 314 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 283 17.931 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 WS_RS06890 fe11506e705f2846e121b14fd96cc2ee 314 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 4 281 8.8E-93 T 11-11-2016 IPR019855 CRISPR-associated protein Cas1, NMENI subtype GO:0004520|GO:0043571|GO:0046872 WS_RS06890 fe11506e705f2846e121b14fd96cc2ee 314 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 288 3.9E-27 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 Pfam PF00072 Response regulator receiver domain 3 112 6.7E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 SUPERFAMILY SSF46894 129 211 3.4E-15 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 SUPERFAMILY SSF52172 1 115 6.83E-29 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 209 1.3E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 SMART SM00862 141 211 5.7E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 SMART SM00448 1 111 6.4E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 Gene3D G3DSA:1.10.10.10 134 211 7.0E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03210 6712df2dfae37b9c3520c877ea79a468 218 Gene3D G3DSA:3.40.50.2300 1 115 3.3E-31 T 11-11-2016 WS_RS05510 e70d17acef141546e33bb7fa4654ea4c 169 SUPERFAMILY SSF109854 8 157 1.52E-30 T 11-11-2016 WS_RS05510 e70d17acef141546e33bb7fa4654ea4c 169 Gene3D G3DSA:1.20.120.450 2 165 2.8E-32 T 11-11-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase WS_RS05510 e70d17acef141546e33bb7fa4654ea4c 169 Pfam PF05163 DinB family 1 165 2.6E-30 T 11-11-2016 IPR007837 DNA damage-inducible protein DinB WS_RS04755 24bc37c657fd51c00600d0192c4b8077 255 Gene3D G3DSA:3.40.50.300 2 243 8.7E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04755 24bc37c657fd51c00600d0192c4b8077 255 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS04755 24bc37c657fd51c00600d0192c4b8077 255 SMART SM00382 36 219 5.6E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS04755 24bc37c657fd51c00600d0192c4b8077 255 Pfam PF00005 ABC transporter 27 170 2.3E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS04755 24bc37c657fd51c00600d0192c4b8077 255 SUPERFAMILY SSF52540 2 238 2.78E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07835 c2d8556b80a3070255df2299f99ce9bc 586 Pfam PF03717 Penicillin-binding Protein dimerisation domain 47 205 7.2E-15 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 WS_RS07835 c2d8556b80a3070255df2299f99ce9bc 586 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 571 8.9E-60 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 WS_RS07835 c2d8556b80a3070255df2299f99ce9bc 586 SUPERFAMILY SSF56601 244 576 1.65E-69 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS07835 c2d8556b80a3070255df2299f99ce9bc 586 Gene3D G3DSA:3.90.1310.10 156 247 1.4E-12 T 11-11-2016 WS_RS07835 c2d8556b80a3070255df2299f99ce9bc 586 Gene3D G3DSA:3.40.710.10 248 576 6.4E-69 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS07835 c2d8556b80a3070255df2299f99ce9bc 586 SUPERFAMILY SSF56519 48 239 9.29E-25 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 WS_RS05355 16f4dda6a625af862517ffebf91d7e49 241 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 10 241 2.6E-95 T 11-11-2016 IPR017792 Urea carboxylase-associated protein 2 WS_RS05355 16f4dda6a625af862517ffebf91d7e49 241 Pfam PF09347 Domain of unknown function (DUF1989) 14 186 1.6E-46 T 11-11-2016 IPR018959 Domain of unknown function DUF1989 WS_RS09980 b9fe45ac49f22ae723b98a371a27d752 244 Pfam PF00849 RNA pseudouridylate synthase 77 199 2.9E-23 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS09980 b9fe45ac49f22ae723b98a371a27d752 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 91 105 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS09980 b9fe45ac49f22ae723b98a371a27d752 244 SUPERFAMILY SSF55120 54 237 4.16E-44 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS06045 ac27d93d23b571b3cece3209c589b88d 119 Pfam PF00593 TonB dependent receptor 10 117 3.9E-9 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06045 ac27d93d23b571b3cece3209c589b88d 119 Gene3D G3DSA:2.40.170.20 10 119 4.6E-21 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06045 ac27d93d23b571b3cece3209c589b88d 119 SUPERFAMILY SSF56935 10 119 6.23E-19 T 11-11-2016 WS_RS05480 edacf858bf7f548b88bb6185806a8f09 197 Pfam PF02613 Nitrate reductase delta subunit 45 157 1.3E-9 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS05480 edacf858bf7f548b88bb6185806a8f09 197 SUPERFAMILY SSF89155 7 196 5.89E-34 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS05480 edacf858bf7f548b88bb6185806a8f09 197 Gene3D G3DSA:1.10.3480.10 10 196 6.8E-17 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 SUPERFAMILY SSF51569 2 298 1.83E-81 T 11-11-2016 WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 Gene3D G3DSA:2.40.50.100 530 600 7.6E-25 T 11-11-2016 WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 Pfam PF00682 HMGL-like 2 266 3.0E-40 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 4 593 1.9E-231 T 11-11-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 557 574 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 Pfam PF00364 Biotin-requiring enzyme 535 600 2.1E-18 T 11-11-2016 IPR000089 Biotin/lipoyl attachment WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 SUPERFAMILY SSF89000 294 451 7.45E-47 T 11-11-2016 WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 Pfam PF02436 Conserved carboxylase domain 289 476 1.0E-53 T 11-11-2016 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 SUPERFAMILY SSF51230 528 600 7.2E-22 T 11-11-2016 IPR011053 Single hybrid motif WS_RS02770 dff651c3f0fc23675b3cdfd2d4208ef8 601 Gene3D G3DSA:3.20.20.70 2 280 3.6E-102 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01710 fdda9fe3399a62f2dd80b34cb5b8d5b6 220 SUPERFAMILY SSF69572 4 198 4.84E-46 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS01710 fdda9fe3399a62f2dd80b34cb5b8d5b6 220 Pfam PF00899 ThiF family 6 192 1.5E-37 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS01710 fdda9fe3399a62f2dd80b34cb5b8d5b6 220 Gene3D G3DSA:3.40.50.720 6 205 7.5E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10740 11e50eafbc81991cfb50bc7ea2ed5f87 228 Gene3D G3DSA:3.60.21.10 134 223 5.7E-28 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS10740 11e50eafbc81991cfb50bc7ea2ed5f87 228 Gene3D G3DSA:3.60.21.10 10 101 5.7E-28 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS10740 11e50eafbc81991cfb50bc7ea2ed5f87 228 SUPERFAMILY SSF56300 135 196 4.95E-16 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS10740 11e50eafbc81991cfb50bc7ea2ed5f87 228 SUPERFAMILY SSF56300 12 100 4.95E-16 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 780 31.353 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Gene3D G3DSA:3.30.70.380 695 786 2.7E-18 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Gene3D G3DSA:3.30.56.10 1 39 1.0E-16 T 11-11-2016 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 SMART SM00874 399 469 1.7E-16 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Pfam PF03484 tRNA synthetase B5 domain 401 468 3.8E-12 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 SUPERFAMILY SSF50249 44 190 7.83E-45 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 SUPERFAMILY SSF54991 688 786 1.2E-23 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Gene3D G3DSA:2.40.50.140 44 192 7.0E-48 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Gene3D G3DSA:3.30.56.20 398 472 6.1E-16 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Pfam PF03147 Ferredoxin-fold anticodon binding domain 693 786 1.2E-20 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Pfam PF01588 Putative tRNA binding domain 45 137 3.9E-26 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 786 8.7E-189 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 SUPERFAMILY SSF46955 399 472 1.01E-12 T 11-11-2016 IPR009061 Putative DNA-binding domain WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 Gene3D G3DSA:3.30.930.10 493 682 9.3E-39 T 11-11-2016 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 SMART SM00896 693 786 4.6E-27 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 WS_RS06260 990aa8763c5cf7016f719fe2da020ac3 786 SUPERFAMILY SSF55681 465 682 7.95E-30 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Gene3D G3DSA:3.40.228.10 184 362 1.2E-64 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 SUPERFAMILY SSF50692 740 769 4.02E-36 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 SUPERFAMILY SSF50692 801 939 4.02E-36 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Gene3D G3DSA:3.40.50.740 431 639 8.7E-36 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Gene3D G3DSA:3.40.50.740 363 390 8.7E-36 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Gene3D G3DSA:2.40.40.20 640 660 1.2E-51 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Gene3D G3DSA:2.40.40.20 755 766 1.2E-51 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Gene3D G3DSA:2.40.40.20 800 939 1.2E-51 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Pfam PF00384 Molybdopterin oxidoreductase 111 557 1.5E-63 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 SUPERFAMILY SSF53706 54 626 3.27E-192 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Gene3D G3DSA:2.20.25.90 55 113 5.4E-17 T 11-11-2016 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 SMART SM00926 54 108 4.1E-16 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 28 8.8E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 55 105 8.4E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 Pfam PF01568 Molydopterin dinucleotide binding domain 806 930 8.9E-20 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS00150 00e386fec1681f1bff4ead5a0e2906bc 939 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 76 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 WS_RS05725 858339e93dffeb6bfb36d0ff77109644 73 SUPERFAMILY SSF54285 1 73 4.51E-11 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp WS_RS05725 858339e93dffeb6bfb36d0ff77109644 73 Pfam PF02597 ThiS family 8 73 8.0E-13 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 WS_RS05725 858339e93dffeb6bfb36d0ff77109644 73 Gene3D G3DSA:3.10.20.30 2 73 1.8E-11 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS09320 aaf56454a66c626298e3960ec2c2fd61 119 Pfam PF01253 Translation initiation factor SUI1 46 115 3.5E-10 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 WS_RS09320 aaf56454a66c626298e3960ec2c2fd61 119 Gene3D G3DSA:3.30.780.10 46 118 9.4E-21 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 WS_RS09320 aaf56454a66c626298e3960ec2c2fd61 119 PIRSF PIRSF037511 2 119 2.1E-35 T 11-11-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 WS_RS09320 aaf56454a66c626298e3960ec2c2fd61 119 SUPERFAMILY SSF55159 19 118 8.89E-20 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 Pfam PF00549 CoA-ligase 262 366 3.1E-23 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 1.8E-155 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-11-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 PIRSF PIRSF001554 1 389 7.8E-151 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 41.753 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 Gene3D G3DSA:3.30.470.20 95 238 2.7E-55 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 SUPERFAMILY SSF52210 241 385 6.67E-51 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 Pfam PF08442 ATP-grasp domain 2 202 1.1E-78 T 11-11-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 Gene3D G3DSA:3.30.1490.20 22 94 2.9E-32 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 Gene3D G3DSA:3.40.50.261 242 386 1.7E-63 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 WS_RS05115 e7063d9c52cfd74918ccb2f0ef7d82db 392 SUPERFAMILY SSF56059 1 238 2.5E-79 T 11-11-2016 WS_RS10075 5b9042774000a0fbe4cec6a656539a86 129 Gene3D G3DSA:3.30.230.10 3 129 5.2E-45 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup WS_RS10075 5b9042774000a0fbe4cec6a656539a86 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 29.028 T 11-11-2016 IPR023035 Ribosomal protein S9, bacterial/plastid WS_RS10075 5b9042774000a0fbe4cec6a656539a86 129 SUPERFAMILY SSF54211 4 129 9.1E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold WS_RS10075 5b9042774000a0fbe4cec6a656539a86 129 Pfam PF00380 Ribosomal protein S9/S16 8 129 2.2E-41 T 11-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 WS_RS10075 5b9042774000a0fbe4cec6a656539a86 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 11-11-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 WS_RS04750 ad20b13c57a6fe3754a57a9c5b995da9 273 Gene3D G3DSA:3.40.50.300 2 253 1.9E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04750 ad20b13c57a6fe3754a57a9c5b995da9 273 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 22 256 7.0E-100 T 11-11-2016 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 WS_RS04750 ad20b13c57a6fe3754a57a9c5b995da9 273 SMART SM00382 32 230 3.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS04750 ad20b13c57a6fe3754a57a9c5b995da9 273 Pfam PF00005 ABC transporter 24 180 4.1E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS04750 ad20b13c57a6fe3754a57a9c5b995da9 273 SUPERFAMILY SSF52540 11 252 6.85E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04750 ad20b13c57a6fe3754a57a9c5b995da9 273 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 179 37.973 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 58 74 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 SUPERFAMILY SSF55620 1 179 8.89E-78 T 11-11-2016 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 106 116 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 Gene3D G3DSA:3.30.1130.10 52 179 6.8E-61 T 11-11-2016 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 1 180 3.6E-77 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 Pfam PF01227 GTP cyclohydrolase I 1 178 1.3E-77 T 11-11-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 WS_RS05865 b40749c8dd34834dc51b5e0fc12c9a79 180 Gene3D G3DSA:1.10.286.10 1 47 7.0E-18 T 11-11-2016 WS_RS01420 3b8e823345e8b0e7cc01569e462d68f5 266 Gene3D G3DSA:3.40.190.10 209 262 3.2E-6 T 11-11-2016 WS_RS01420 3b8e823345e8b0e7cc01569e462d68f5 266 SUPERFAMILY SSF53850 26 257 6.79E-33 T 11-11-2016 WS_RS01420 3b8e823345e8b0e7cc01569e462d68f5 266 Gene3D G3DSA:3.40.190.10 27 132 2.5E-12 T 11-11-2016 WS_RS01420 3b8e823345e8b0e7cc01569e462d68f5 266 Pfam PF13531 Bacterial extracellular solute-binding protein 27 254 9.5E-28 T 11-11-2016 WS_RS07345 6730f12eeb6b7f977a20dd00c5d18f6d 270 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 20 269 1.1E-83 T 11-11-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 WS_RS07345 6730f12eeb6b7f977a20dd00c5d18f6d 270 Gene3D G3DSA:1.10.3720.10 73 268 1.7E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS07345 6730f12eeb6b7f977a20dd00c5d18f6d 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 255 1.7E-11 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS07345 6730f12eeb6b7f977a20dd00c5d18f6d 270 SUPERFAMILY SSF161098 74 259 2.49E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04990 84c647b3d0af3c3a54bca40c1f75d5e3 573 Pfam PF01432 Peptidase family M3 182 554 3.3E-44 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 WS_RS04990 84c647b3d0af3c3a54bca40c1f75d5e3 573 Pfam PF08439 Oligopeptidase F 111 167 1.8E-11 T 11-11-2016 IPR013647 Oligopeptidase F, N-terminal domain WS_RS04990 84c647b3d0af3c3a54bca40c1f75d5e3 573 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 3 569 7.5E-175 T 11-11-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 WS_RS04990 84c647b3d0af3c3a54bca40c1f75d5e3 573 SUPERFAMILY SSF55486 4 554 1.38E-101 T 11-11-2016 WS_RS06385 e6d79930b22e0f6b3a22b28deedd4fb9 246 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 6 244 6.7E-48 T 11-11-2016 IPR023875 DNA metabolism protein, putative WS_RS06385 e6d79930b22e0f6b3a22b28deedd4fb9 246 Pfam PF13566 Domain of unknown function (DUF4130 91 243 2.6E-36 T 11-11-2016 IPR025404 Domain of unknown function DUF4130 WS_RS01540 6d40180d942497b4839df7fe2191aa2c 101 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 71 9.6E-19 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 WS_RS01540 6d40180d942497b4839df7fe2191aa2c 101 PRINTS PR01651 Protein-export SecG membrane protein signature 36 52 1.5E-8 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 WS_RS01540 6d40180d942497b4839df7fe2191aa2c 101 PRINTS PR01651 Protein-export SecG membrane protein signature 2 22 1.5E-8 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 WS_RS01540 6d40180d942497b4839df7fe2191aa2c 101 PRINTS PR01651 Protein-export SecG membrane protein signature 52 74 1.5E-8 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 WS_RS01540 6d40180d942497b4839df7fe2191aa2c 101 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.2E-16 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 ProSitePatterns PS00756 Protein secY signature 2. 159 176 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PIRSF PIRSF004557 1 418 8.7E-123 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 Pfam PF00344 SecY translocase 62 399 5.6E-99 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 Gene3D G3DSA:1.10.3370.10 3 414 3.2E-133 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 415 26.932 T 11-11-2016 IPR026593 Protein translocase subunit SecY WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 SUPERFAMILY SSF103491 3 406 4.97E-109 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 140 165 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 352 370 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 297 319 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 166 189 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 258 277 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 PRINTS PR00303 Preprotein translocase SecY subunit signature 384 402 5.1E-86 T 11-11-2016 WS_RS07995 796fc8a333a136bd6169e0da3ef1804f 419 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 410 4.3E-104 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 Gene3D G3DSA:3.40.50.1100 101 184 8.3E-18 T 11-11-2016 WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 394 3.6E-187 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 Gene3D G3DSA:3.40.50.1100 185 397 1.8E-89 T 11-11-2016 WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 SUPERFAMILY SSF53686 11 392 8.12E-145 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 384 1.3E-47 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 PIRSF PIRSF001413 5 400 7.5E-161 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS06450 f0ccc5948dc4fde3b1bb4f2db1db77de 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 397 52.338 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Gene3D G3DSA:2.20.25.90 67 155 4.4E-8 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 SUPERFAMILY SSF53706 67 106 5.76E-103 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 SUPERFAMILY SSF53706 135 837 5.76E-103 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Gene3D G3DSA:2.40.40.20 880 1009 1.4E-15 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 SUPERFAMILY SSF50692 883 1009 4.07E-15 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 SMART SM00926 67 151 1.3E-10 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Gene3D G3DSA:3.40.50.740 700 720 1.6E-28 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Gene3D G3DSA:3.40.50.740 613 668 1.6E-28 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Gene3D G3DSA:3.40.50.740 156 262 1.6E-28 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Pfam PF00384 Molybdopterin oxidoreductase 154 674 6.4E-11 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Pfam PF01568 Molydopterin dinucleotide binding domain 886 976 3.3E-9 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Gene3D G3DSA:3.40.228.10 449 612 2.3E-38 T 11-11-2016 WS_RS04500 4582602d76a8c70d9885ec2bbcc44d2e 1010 Gene3D G3DSA:3.40.228.10 274 374 2.3E-38 T 11-11-2016 WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 SUPERFAMILY SSF52540 3 251 1.93E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 Pfam PF00005 ABC transporter 297 448 6.0E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 Pfam PF00005 ABC transporter 20 179 1.0E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 Gene3D G3DSA:3.40.50.300 270 521 3.5E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 Gene3D G3DSA:3.40.50.300 2 253 3.1E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 523 0.0017 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 255 2.5E-5 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 SUPERFAMILY SSF52540 288 519 1.17E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 SMART SM00382 29 229 4.3E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 SMART SM00382 306 497 2.9E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS02795 b2434df5cf42b12969f1e23c50075160 525 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 178 21.759 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 Pfam PF01386 Ribosomal L25p family 2 87 2.3E-19 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 176 1.1E-53 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 Gene3D G3DSA:2.40.240.10 2 89 1.9E-22 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 177 2.5E-17 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 SUPERFAMILY SSF50715 6 176 2.79E-45 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 90 4.0E-46 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 WS_RS09805 7701e5e8b6bbb86cd1fdae5de2bbbaa7 178 Gene3D G3DSA:2.170.120.20 95 177 1.5E-19 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain WS_RS00465 8664bad43fea2df99cc3e18adb7d5ac3 235 Gene3D G3DSA:1.20.58.220 166 234 3.8E-5 T 11-11-2016 WS_RS00465 8664bad43fea2df99cc3e18adb7d5ac3 235 SUPERFAMILY SSF109755 19 233 1.99E-22 T 11-11-2016 WS_RS00465 8664bad43fea2df99cc3e18adb7d5ac3 235 Gene3D G3DSA:1.20.58.220 19 121 5.1E-6 T 11-11-2016 WS_RS05810 50f6e794ed51687990bcda474efe9da1 144 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 144 1.9E-52 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 WS_RS05810 50f6e794ed51687990bcda474efe9da1 144 PIRSF PIRSF004638 1 144 1.1E-51 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 WS_RS05810 50f6e794ed51687990bcda474efe9da1 144 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 144 3.1E-51 T 11-11-2016 IPR014351 Conserved hypothetical protein CHP00701 WS_RS01670 eec4e79cfb602acd4a39d415464ca75b 216 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 197 22.438 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 WS_RS01670 eec4e79cfb602acd4a39d415464ca75b 216 Pfam PF13500 AAA domain 4 179 5.9E-27 T 11-11-2016 WS_RS01670 eec4e79cfb602acd4a39d415464ca75b 216 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 168 9.5E-37 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 WS_RS01670 eec4e79cfb602acd4a39d415464ca75b 216 PIRSF PIRSF006755 1 192 2.5E-38 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 WS_RS01670 eec4e79cfb602acd4a39d415464ca75b 216 Gene3D G3DSA:3.40.50.300 1 185 9.3E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01670 eec4e79cfb602acd4a39d415464ca75b 216 SUPERFAMILY SSF52540 1 186 3.55E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02560 e6bfc1ebe00dc345bfe106d2c21d593b 247 Pfam PF13103 TonB C terminal 159 241 1.9E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 WS_RS02560 e6bfc1ebe00dc345bfe106d2c21d593b 247 SUPERFAMILY SSF74653 153 244 3.33E-5 T 11-11-2016 WS_RS02560 e6bfc1ebe00dc345bfe106d2c21d593b 247 Gene3D G3DSA:3.30.1150.10 156 244 1.3E-4 T 11-11-2016 WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 Pfam PF00733 Asparagine synthase 234 615 1.5E-105 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 SUPERFAMILY SSF52402 470 610 7.28E-85 T 11-11-2016 WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 SUPERFAMILY SSF52402 222 375 7.28E-85 T 11-11-2016 WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 Gene3D G3DSA:3.40.50.620 215 371 2.2E-89 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 Gene3D G3DSA:3.40.50.620 466 614 2.2E-89 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 Pfam PF13537 Glutamine amidotransferase domain 42 159 1.8E-42 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 PIRSF PIRSF001589 1 617 6.0E-157 T 11-11-2016 WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 550 1.4E-148 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 Gene3D G3DSA:3.60.20.10 1 214 1.2E-67 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS00220 f90592c6d81bcbebdb95fbbbb7adec83 618 SUPERFAMILY SSF56235 1 215 3.52E-63 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal WS_RS03000 139a396e6495cca6373195ce0bc08959 194 Gene3D G3DSA:3.40.50.2020 79 181 6.3E-9 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS03000 139a396e6495cca6373195ce0bc08959 194 SUPERFAMILY SSF53271 88 188 1.29E-11 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS07740 85ae43d44563e2bc55d3c085d847af3a 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 32 158 3.7E-21 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS07740 85ae43d44563e2bc55d3c085d847af3a 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 117 128 - T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS07740 85ae43d44563e2bc55d3c085d847af3a 161 SUPERFAMILY SSF55083 30 158 3.27E-34 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS07740 85ae43d44563e2bc55d3c085d847af3a 161 Gene3D G3DSA:3.30.70.560 30 158 1.7E-33 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS07740 85ae43d44563e2bc55d3c085d847af3a 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 31 158 1.9E-31 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 WS_RS04530 b918769c77f5542d729d593495b45701 308 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 228 3.1E-70 T 11-11-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 WS_RS04530 b918769c77f5542d729d593495b45701 308 SUPERFAMILY SSF53850 23 306 1.38E-71 T 11-11-2016 WS_RS04530 b918769c77f5542d729d593495b45701 308 Pfam PF12849 PBP superfamily domain 22 274 2.2E-45 T 11-11-2016 IPR024370 PBP domain WS_RS04530 b918769c77f5542d729d593495b45701 308 Gene3D G3DSA:3.40.190.10 98 257 4.6E-45 T 11-11-2016 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 SUPERFAMILY SSF58104 376 570 1.31E-53 T 11-11-2016 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 SUPERFAMILY SSF58104 257 287 1.31E-53 T 11-11-2016 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 Gene3D G3DSA:3.30.450.20 26 185 5.5E-32 T 11-11-2016 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 Pfam PF17200 Single Cache domain 2 74 187 1.7E-20 T 11-11-2016 IPR033480 Single Cache domain 2 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 417 565 2.1E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 SMART SM00283 384 577 1.1E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 SMART SM01049 45 135 7.5E-6 T 11-11-2016 IPR033480 Single Cache domain 2 WS_RS09005 dea30dbc23d92f72ce9cd2cd4cabb9cb 582 Gene3D G3DSA:1.10.287.950 376 565 1.2E-47 T 11-11-2016 WS_RS01255 6cab72c5d9df5bcadf26f2174ce357bf 363 SUPERFAMILY SSF53756 26 329 1.98E-27 T 11-11-2016 WS_RS01255 6cab72c5d9df5bcadf26f2174ce357bf 363 Gene3D G3DSA:3.40.50.2000 183 319 1.1E-14 T 11-11-2016 WS_RS01255 6cab72c5d9df5bcadf26f2174ce357bf 363 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 132 310 1.6E-8 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 WS_RS08320 cf0a1bd48b24852d2a437a532fca9a73 437 PIRSF PIRSF004539 2 435 3.3E-182 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 WS_RS08320 cf0a1bd48b24852d2a437a532fca9a73 437 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 4 367 7.5E-140 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 WS_RS08320 cf0a1bd48b24852d2a437a532fca9a73 437 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 4 434 3.2E-168 T 11-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 WS_RS08160 7bf6ca57aee8fe3067b0122142af59bd 210 Pfam PF13177 DNA polymerase III, delta subunit 45 109 2.7E-15 T 11-11-2016 WS_RS08160 7bf6ca57aee8fe3067b0122142af59bd 210 Gene3D G3DSA:3.40.50.300 42 109 2.1E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08160 7bf6ca57aee8fe3067b0122142af59bd 210 SUPERFAMILY SSF52540 39 114 1.27E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02570 38c6cd375bd9dd094cee9ac04f3b5848 170 SUPERFAMILY SSF103088 62 170 1.57E-31 T 11-11-2016 IPR006665 OmpA-like domain WS_RS02570 38c6cd375bd9dd094cee9ac04f3b5848 170 Pfam PF00691 OmpA family 65 162 7.5E-17 T 11-11-2016 IPR006665 OmpA-like domain WS_RS02570 38c6cd375bd9dd094cee9ac04f3b5848 170 Gene3D G3DSA:3.30.1330.60 60 169 9.3E-32 T 11-11-2016 IPR006665 OmpA-like domain WS_RS02570 38c6cd375bd9dd094cee9ac04f3b5848 170 PRINTS PR01021 OMPA domain signature 66 88 2.1E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 WS_RS02570 38c6cd375bd9dd094cee9ac04f3b5848 170 PRINTS PR01021 OMPA domain signature 113 129 2.1E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 WS_RS02570 38c6cd375bd9dd094cee9ac04f3b5848 170 PRINTS PR01021 OMPA domain signature 98 113 2.1E-15 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 WS_RS08830 2f473ad6817865c31483379408408c8a 80 SUPERFAMILY SSF55229 32 76 2.09E-9 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 WS_RS08830 2f473ad6817865c31483379408408c8a 80 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 79 15.315 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 WS_RS08830 2f473ad6817865c31483379408408c8a 80 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 76 1.5E-24 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 WS_RS08830 2f473ad6817865c31483379408408c8a 80 Pfam PF03776 Septum formation topological specificity factor MinE 14 76 9.2E-17 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 WS_RS08830 2f473ad6817865c31483379408408c8a 80 Gene3D G3DSA:3.30.1070.10 36 78 7.2E-11 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 WS_RS00165 a4eb2f1dbb527a3dc2e08a950fd46772 126 Pfam PF13187 4Fe-4S dicluster domain 9 65 8.7E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS00165 a4eb2f1dbb527a3dc2e08a950fd46772 126 Gene3D G3DSA:3.30.70.20 3 69 1.9E-13 T 11-11-2016 WS_RS00165 a4eb2f1dbb527a3dc2e08a950fd46772 126 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS00165 a4eb2f1dbb527a3dc2e08a950fd46772 126 SUPERFAMILY SSF54862 1 71 1.85E-13 T 11-11-2016 WS_RS04550 12c0c7992897cb968da6a949e88ee4f0 345 Gene3D G3DSA:3.40.190.10 26 181 2.0E-29 T 11-11-2016 WS_RS04550 12c0c7992897cb968da6a949e88ee4f0 345 SUPERFAMILY SSF53850 25 332 6.11E-68 T 11-11-2016 WS_RS04550 12c0c7992897cb968da6a949e88ee4f0 345 Pfam PF12849 PBP superfamily domain 20 298 1.5E-41 T 11-11-2016 IPR024370 PBP domain WS_RS08395 4423f7acaec40a8585161afbf326a0ea 243 Gene3D G3DSA:3.40.980.10 8 164 5.4E-16 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS08395 4423f7acaec40a8585161afbf326a0ea 243 SMART SM00852 7 170 2.3E-13 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS08395 4423f7acaec40a8585161afbf326a0ea 243 SUPERFAMILY SSF53218 5 168 2.22E-21 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS08395 4423f7acaec40a8585161afbf326a0ea 243 Pfam PF00994 Probable molybdopterin binding domain 9 163 1.4E-19 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS02350 edba03832971a024f75baaf6c9b44daf 267 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 109 163 2.0E-25 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02350 edba03832971a024f75baaf6c9b44daf 267 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 141 162 - T 11-11-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02350 edba03832971a024f75baaf6c9b44daf 267 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 64 181 4.1E-35 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02350 edba03832971a024f75baaf6c9b44daf 267 SUPERFAMILY SSF143243 51 208 2.22E-44 T 11-11-2016 WS_RS02350 edba03832971a024f75baaf6c9b44daf 267 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 65 179 1.6E-38 T 11-11-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08125 01480462325175be6eddb8132657790f 246 Gene3D G3DSA:3.60.21.10 4 139 1.3E-30 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS08125 01480462325175be6eddb8132657790f 246 Gene3D G3DSA:3.60.21.10 189 242 1.3E-30 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS08125 01480462325175be6eddb8132657790f 246 Pfam PF00149 Calcineurin-like phosphoesterase 3 205 4.4E-10 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 WS_RS08125 01480462325175be6eddb8132657790f 246 SUPERFAMILY SSF56300 182 242 1.19E-29 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS08125 01480462325175be6eddb8132657790f 246 SUPERFAMILY SSF56300 2 122 1.19E-29 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS04965 f3e35df316600b82092bd241a69d042a 231 Gene3D G3DSA:3.40.50.2300 8 132 5.7E-34 T 11-11-2016 WS_RS04965 f3e35df316600b82092bd241a69d042a 231 SMART SM00448 10 122 1.7E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04965 f3e35df316600b82092bd241a69d042a 231 Gene3D G3DSA:1.10.10.10 173 214 8.4E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04965 f3e35df316600b82092bd241a69d042a 231 Pfam PF00072 Response regulator receiver domain 12 120 3.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04965 f3e35df316600b82092bd241a69d042a 231 Pfam PF05732 Firmicute plasmid replication protein (RepL) 142 215 2.1E-10 T 11-11-2016 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 WS_RS04965 f3e35df316600b82092bd241a69d042a 231 SUPERFAMILY SSF52172 8 133 1.21E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04965 f3e35df316600b82092bd241a69d042a 231 SUPERFAMILY SSF46785 153 211 1.39E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS06965 6580975ef414984f176f8056b76b77eb 261 Gene3D G3DSA:3.40.1090.10 9 177 8.8E-13 T 11-11-2016 WS_RS06965 6580975ef414984f176f8056b76b77eb 261 Pfam PF01734 Patatin-like phospholipase 9 167 6.4E-24 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 WS_RS06965 6580975ef414984f176f8056b76b77eb 261 SUPERFAMILY SSF52151 5 251 2.88E-46 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 SUPERFAMILY SSF54782 220 304 1.57E-23 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 294 1.4E-15 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 PIRSF PIRSF001438 1 310 3.7E-111 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.1E-45 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.1E-45 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 2.1E-45 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.1E-45 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.1E-45 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 296 2.9E-103 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 Gene3D G3DSA:3.30.160.40 220 304 2.1E-24 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 296 36.901 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 Gene3D G3DSA:3.40.190.10 109 198 1.9E-33 T 11-11-2016 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 11-11-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 Gene3D G3DSA:3.40.190.10 2 108 2.2E-46 T 11-11-2016 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 6.7E-74 T 11-11-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07455 4cb1708f929aac81e59aa03229f2d0fc 311 SUPERFAMILY SSF53850 3 211 8.25E-75 T 11-11-2016 WS_RS07035 3386825a06db5fc91c8d871b8f940a5b 413 Pfam PF01979 Amidohydrolase family 57 410 3.3E-41 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 WS_RS07035 3386825a06db5fc91c8d871b8f940a5b 413 SUPERFAMILY SSF51338 3 73 4.16E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 WS_RS07035 3386825a06db5fc91c8d871b8f940a5b 413 SUPERFAMILY SSF51556 60 363 1.26E-59 T 11-11-2016 IPR032466 Metal-dependent hydrolase WS_RS07035 3386825a06db5fc91c8d871b8f940a5b 413 Gene3D G3DSA:3.20.20.140 62 381 7.9E-50 T 11-11-2016 WS_RS09160 726050200d4f8270e2f2fffd09dfac5d 178 SUPERFAMILY SSF51161 5 173 1.39E-46 T 11-11-2016 IPR011004 Trimeric LpxA-like WS_RS09160 726050200d4f8270e2f2fffd09dfac5d 178 Gene3D G3DSA:2.160.10.10 9 175 1.7E-45 T 11-11-2016 WS_RS09160 726050200d4f8270e2f2fffd09dfac5d 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 130 1.7E-9 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS09160 726050200d4f8270e2f2fffd09dfac5d 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 2.0E-4 T 11-11-2016 IPR001451 Hexapeptide repeat WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 SMART SM00418 34 112 6.3E-31 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.5E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.5E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 66 1.5E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 83 98 1.5E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 57 75 - T 11-11-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 Gene3D G3DSA:1.10.10.10 3 116 3.4E-39 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 Pfam PF01022 Bacterial regulatory protein, arsR family 41 86 3.7E-20 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 WS_RS05380 905fd055d55dd89bf30ac15f8ccf7558 125 SUPERFAMILY SSF46785 22 113 1.78E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03330 e868a806ff55c57587105af61348d7a8 223 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 6 193 6.4E-75 T 11-11-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein WS_RS03330 e868a806ff55c57587105af61348d7a8 223 SUPERFAMILY SSF102114 24 217 2.49E-29 T 11-11-2016 WS_RS03330 e868a806ff55c57587105af61348d7a8 223 Pfam PF04055 Radical SAM superfamily 27 164 5.9E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 WS_RS03330 e868a806ff55c57587105af61348d7a8 223 Pfam PF13353 4Fe-4S single cluster domain 22 107 9.8E-8 T 11-11-2016 WS_RS03330 e868a806ff55c57587105af61348d7a8 223 Gene3D G3DSA:3.20.20.70 28 199 2.3E-27 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS07385 479d8d453599f9bacc92c56285c0e93c 423 Pfam PF12704 MacB-like periplasmic core domain 19 210 1.1E-7 T 11-11-2016 IPR025857 MacB-like periplasmic core domain WS_RS07385 479d8d453599f9bacc92c56285c0e93c 423 Pfam PF02687 FtsX-like permease family 302 409 3.0E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 WS_RS01065 4cf16f1091cf39f6c4894cf882b3e470 187 Pfam PF00072 Response regulator receiver domain 6 114 1.8E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01065 4cf16f1091cf39f6c4894cf882b3e470 187 SMART SM00448 3 117 2.5E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01065 4cf16f1091cf39f6c4894cf882b3e470 187 SUPERFAMILY SSF52172 4 129 7.68E-25 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS01065 4cf16f1091cf39f6c4894cf882b3e470 187 Gene3D G3DSA:3.40.50.2300 4 131 7.1E-25 T 11-11-2016 WS_RS07190 0365f3441424db98dd7d8c98c56648b8 530 SUPERFAMILY SSF50182 314 394 1.08E-5 T 11-11-2016 IPR010920 LSM domain WS_RS07190 0365f3441424db98dd7d8c98c56648b8 530 Gene3D G3DSA:2.30.30.60 331 393 7.6E-5 T 11-11-2016 WS_RS07190 0365f3441424db98dd7d8c98c56648b8 530 Pfam PF00924 Mechanosensitive ion channel 270 483 1.4E-37 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 WS_RS01305 03a86d3510969dda35d2cc9d13ec7636 400 SUPERFAMILY SSF51261 95 342 2.2E-61 T 11-11-2016 IPR011055 Duplicated hybrid motif WS_RS01305 03a86d3510969dda35d2cc9d13ec7636 400 Gene3D G3DSA:2.70.70.10 200 343 2.1E-43 T 11-11-2016 WS_RS01305 03a86d3510969dda35d2cc9d13ec7636 400 Pfam PF01551 Peptidase family M23 242 338 8.6E-31 T 11-11-2016 IPR016047 Peptidase M23 WS_RS06615 3b96bbd8067d4d097568c56a6a547a9b 140 Pfam PF03270 Protein of unknown function, DUF269 22 138 2.0E-35 T 11-11-2016 IPR004952 Uncharacterised protein family UPF0460 WS_RS06615 3b96bbd8067d4d097568c56a6a547a9b 140 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 3 139 3.1E-53 T 11-11-2016 IPR004952 Uncharacterised protein family UPF0460 WS_RS06615 3b96bbd8067d4d097568c56a6a547a9b 140 PIRSF PIRSF005788 2 140 2.1E-39 T 11-11-2016 IPR004952 Uncharacterised protein family UPF0460 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 SUPERFAMILY SSF56024 497 672 6.06E-63 T 11-11-2016 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 Pfam PF13090 Polyphosphate kinase C-terminal domain 326 666 1.9E-146 T 11-11-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 666 5.4E-249 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 Gene3D G3DSA:3.30.870.10 312 495 2.5E-70 T 11-11-2016 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 SUPERFAMILY SSF56024 312 494 1.1E-52 T 11-11-2016 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 SUPERFAMILY SSF140356 5 109 7.98E-36 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 673 34.145 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 Pfam PF02503 Polyphosphate kinase middle domain 122 316 5.9E-61 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 PIRSF PIRSF015589 1 685 1.1E-264 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 SUPERFAMILY SSF143724 113 301 4.32E-56 T 11-11-2016 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 Gene3D G3DSA:3.30.870.10 496 671 6.4E-66 T 11-11-2016 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 Gene3D G3DSA:3.30.1840.10 111 296 1.5E-60 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 WS_RS09165 25cd3e0b8bd359465fc772fa561aad0b 697 Pfam PF13089 Polyphosphate kinase N-terminal domain 9 113 1.2E-34 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 WS_RS05875 98adbf414322d59fec92991e72873661 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 4 179 1.2E-45 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS05875 98adbf414322d59fec92991e72873661 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 352 3.2E-10 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS05875 98adbf414322d59fec92991e72873661 361 SUPERFAMILY SSF55120 239 355 7.34E-86 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS05875 98adbf414322d59fec92991e72873661 361 SUPERFAMILY SSF55120 3 208 7.34E-86 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS05875 98adbf414322d59fec92991e72873661 361 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 8 357 3.0E-68 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS05875 98adbf414322d59fec92991e72873661 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 358 29.265 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS05875 98adbf414322d59fec92991e72873661 361 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 73 86 - T 11-11-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 WS_RS06930 2e44523d83e9f30d12ff9c2102f82273 447 Pfam PF01474 Class-II DAHP synthetase family 5 441 1.8E-205 T 11-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 WS_RS06930 2e44523d83e9f30d12ff9c2102f82273 447 SUPERFAMILY SSF51569 3 445 2.86E-199 T 11-11-2016 WS_RS06930 2e44523d83e9f30d12ff9c2102f82273 447 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 446 8.1E-211 T 11-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 WS_RS09525 332666058c5e8c04b298431e336889d7 174 SUPERFAMILY SSF55785 19 114 2.44E-24 T 11-11-2016 IPR000014 PAS domain WS_RS09525 332666058c5e8c04b298431e336889d7 174 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 112 1.3E-12 T 11-11-2016 IPR000014 PAS domain WS_RS09525 332666058c5e8c04b298431e336889d7 174 Pfam PF08447 PAS fold 30 112 3.2E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS09525 332666058c5e8c04b298431e336889d7 174 Gene3D G3DSA:3.30.450.20 18 112 1.2E-18 T 11-11-2016 WS_RS04790 2dabe5974f797f6823a54bad0631ff53 329 Gene3D G3DSA:3.10.490.10 163 295 6.8E-13 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like WS_RS04790 2dabe5974f797f6823a54bad0631ff53 329 SUPERFAMILY SSF110857 167 266 3.66E-5 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like WS_RS04790 2dabe5974f797f6823a54bad0631ff53 329 Pfam PF15956 Domain of unknown function (DUF4760) 34 153 2.6E-11 T 11-11-2016 IPR031876 Protein of unknown function DUF4760 WS_RS04790 2dabe5974f797f6823a54bad0631ff53 329 Pfam PF04752 ChaC-like protein 166 288 3.9E-7 T 11-11-2016 IPR006840 ChaC-like protein Reactome: R-HSA-174403 WS_RS06625 7473f5f3b0cd0f405d5c580c29ce411c 419 Gene3D G3DSA:3.40.50.1980 14 142 3.6E-27 T 11-11-2016 WS_RS06625 7473f5f3b0cd0f405d5c580c29ce411c 419 SUPERFAMILY SSF53807 2 417 5.56E-87 T 11-11-2016 WS_RS06625 7473f5f3b0cd0f405d5c580c29ce411c 419 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 14 411 1.6E-66 T 11-11-2016 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 WS_RS06625 7473f5f3b0cd0f405d5c580c29ce411c 419 Gene3D G3DSA:3.40.50.1980 156 240 1.1E-19 T 11-11-2016 WS_RS06625 7473f5f3b0cd0f405d5c580c29ce411c 419 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 31 38 - T 11-11-2016 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 WS_RS06625 7473f5f3b0cd0f405d5c580c29ce411c 419 Gene3D G3DSA:1.20.89.10 253 335 2.5E-19 T 11-11-2016 WS_RS00555 658d7e81d000ca71d425fd8205136f5c 317 Pfam PF03916 Polysulphide reductase, NrfD 7 316 1.4E-107 T 11-11-2016 IPR005614 NrfD family WS_RS00555 658d7e81d000ca71d425fd8205136f5c 317 Gene3D G3DSA:1.20.1630.10 15 304 2.7E-5 T 11-11-2016 WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 Gene3D G3DSA:1.10.3810.10 56 226 2.8E-66 T 11-11-2016 WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 62 592 2.1E-175 T 11-11-2016 WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 SUPERFAMILY SSF53955 37 242 3.09E-71 T 11-11-2016 IPR023346 Lysozyme-like domain WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 Gene3D G3DSA:3.40.710.10 227 626 3.9E-113 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 Pfam PF00912 Transglycosylase 52 226 8.2E-60 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 SUPERFAMILY SSF56601 257 616 6.0E-109 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 SUPERFAMILY SSF56601 207 229 6.0E-109 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS09655 d09e99e41028ae88eda6d7887239739b 640 Pfam PF00905 Penicillin binding protein transpeptidase domain 317 585 1.2E-32 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 WS_RS00730 603a0b1f0ab47762abf2d4cfbff2efac 223 Gene3D G3DSA:3.40.50.300 4 221 2.1E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00730 603a0b1f0ab47762abf2d4cfbff2efac 223 SMART SM00382 30 218 7.5E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00730 603a0b1f0ab47762abf2d4cfbff2efac 223 Pfam PF00005 ABC transporter 22 168 7.2E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS00730 603a0b1f0ab47762abf2d4cfbff2efac 223 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS00730 603a0b1f0ab47762abf2d4cfbff2efac 223 SUPERFAMILY SSF52540 7 222 6.84E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04445 347d51139cabb25e460ba96e35761c5e 165 Pfam PF05573 NosL 40 159 6.9E-21 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL WS_RS04445 347d51139cabb25e460ba96e35761c5e 165 SUPERFAMILY SSF160387 57 162 9.94E-28 T 11-11-2016 WS_RS05045 ca563227a5414743585724a55a6e7aa6 196 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 194 2.0E-57 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 WS_RS05045 ca563227a5414743585724a55a6e7aa6 196 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 192 27.155 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 WS_RS05045 ca563227a5414743585724a55a6e7aa6 196 Pfam PF00551 Formyl transferase 6 186 3.0E-49 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS05045 ca563227a5414743585724a55a6e7aa6 196 Gene3D G3DSA:3.40.50.170 5 195 3.5E-63 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS05045 ca563227a5414743585724a55a6e7aa6 196 SUPERFAMILY SSF53328 6 195 3.79E-51 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 WS_RS05985 63f06aadfd88eb08c6d6730b2289b885 452 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 21 433 5.0E-147 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 WS_RS05985 63f06aadfd88eb08c6d6730b2289b885 452 Pfam PF06965 Na+/H+ antiporter 1 20 433 2.1E-147 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 WS_RS05985 63f06aadfd88eb08c6d6730b2289b885 452 Gene3D G3DSA:1.20.1530.10 303 438 3.1E-148 T 11-11-2016 IPR023171 Na/H antiporter domain WS_RS05985 63f06aadfd88eb08c6d6730b2289b885 452 Gene3D G3DSA:1.20.1530.10 19 257 3.1E-148 T 11-11-2016 IPR023171 Na/H antiporter domain WS_RS05985 63f06aadfd88eb08c6d6730b2289b885 452 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 18 442 22.592 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 WS_RS00550 a7dff123bf76b34a8b4ddb93203d4b32 191 Gene3D G3DSA:3.30.70.20 66 96 7.4E-12 T 11-11-2016 WS_RS00550 a7dff123bf76b34a8b4ddb93203d4b32 191 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 93 104 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS00550 a7dff123bf76b34a8b4ddb93203d4b32 191 SUPERFAMILY SSF54862 3 185 5.23E-61 T 11-11-2016 WS_RS00550 a7dff123bf76b34a8b4ddb93203d4b32 191 Pfam PF13247 4Fe-4S dicluster domain 54 149 3.2E-19 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS00550 a7dff123bf76b34a8b4ddb93203d4b32 191 Gene3D G3DSA:3.30.70.20 97 133 5.8E-13 T 11-11-2016 WS_RS00550 a7dff123bf76b34a8b4ddb93203d4b32 191 Gene3D G3DSA:3.30.70.20 134 188 4.0E-33 T 11-11-2016 WS_RS00550 a7dff123bf76b34a8b4ddb93203d4b32 191 Gene3D G3DSA:3.30.70.20 4 65 4.0E-33 T 11-11-2016 WS_RS05425 c8c28524706c3d3df9dcc916b435a8d4 388 Pfam PF02661 Fic/DOC family 110 214 1.5E-18 T 11-11-2016 IPR003812 Fido domain WS_RS05425 c8c28524706c3d3df9dcc916b435a8d4 388 SUPERFAMILY SSF140931 89 278 3.79E-36 T 11-11-2016 IPR003812 Fido domain WS_RS05425 c8c28524706c3d3df9dcc916b435a8d4 388 Gene3D G3DSA:1.10.3290.10 39 279 2.5E-52 T 11-11-2016 IPR003812 Fido domain WS_RS08100 c9d406206f896b214e3539acab5bd14d 183 Pfam PF01351 Ribonuclease HII 4 174 6.9E-30 T 11-11-2016 IPR024567 Ribonuclease HII/HIII domain WS_RS08100 c9d406206f896b214e3539acab5bd14d 183 Gene3D G3DSA:3.30.420.10 2 136 1.2E-26 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS08100 c9d406206f896b214e3539acab5bd14d 183 SUPERFAMILY SSF53098 2 176 5.01E-51 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 8.3E-61 T 11-11-2016 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 8.3E-61 T 11-11-2016 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 8.3E-61 T 11-11-2016 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 8.3E-61 T 11-11-2016 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 8.3E-61 T 11-11-2016 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 8.3E-61 T 11-11-2016 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 Pfam PF00206 Lyase 7 301 2.3E-77 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 455 1.9E-174 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 Gene3D G3DSA:1.10.40.30 376 434 3.7E-24 T 11-11-2016 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 9.0E-26 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 9.0E-26 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 9.0E-26 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 9.0E-26 T 11-11-2016 IPR000362 Fumarate lyase family WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 455 40.282 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 5.4E-19 T 11-11-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 SUPERFAMILY SSF48557 7 459 9.42E-139 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 Gene3D G3DSA:1.10.275.10 2 107 3.3E-40 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal WS_RS05820 8c1010c902ca2cd58ab9b076ae806826 462 Gene3D G3DSA:1.20.200.10 108 375 4.4E-95 T 11-11-2016 WS_RS08000 a1c95cdd055c70e9812d80541f4963e7 133 Gene3D G3DSA:3.100.10.10 32 123 4.4E-14 T 11-11-2016 WS_RS08000 a1c95cdd055c70e9812d80541f4963e7 133 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 132 1.3E-42 T 11-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS08000 a1c95cdd055c70e9812d80541f4963e7 133 SUPERFAMILY SSF52080 5 132 3.01E-32 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P WS_RS08000 a1c95cdd055c70e9812d80541f4963e7 133 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 130 3.3E-20 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P WS_RS08000 a1c95cdd055c70e9812d80541f4963e7 133 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 133 14.337 T 11-11-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 WS_RS06060 463d10931d4a4a301df545f223ae65ab 405 Pfam PF07690 Major Facilitator Superfamily 19 345 8.7E-23 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 WS_RS06060 463d10931d4a4a301df545f223ae65ab 405 Gene3D G3DSA:1.20.1250.20 223 398 1.1E-9 T 11-11-2016 WS_RS06060 463d10931d4a4a301df545f223ae65ab 405 Gene3D G3DSA:1.20.1250.20 12 198 8.1E-16 T 11-11-2016 WS_RS06060 463d10931d4a4a301df545f223ae65ab 405 SUPERFAMILY SSF103473 12 399 2.22E-34 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS09240 1c123a34bef33c9cfc3f7f17030e9226 201 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 8 196 1.4E-44 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 WS_RS09240 1c123a34bef33c9cfc3f7f17030e9226 201 Gene3D G3DSA:3.40.50.150 3 197 4.7E-54 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS09240 1c123a34bef33c9cfc3f7f17030e9226 201 SUPERFAMILY SSF53335 10 195 1.4E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS09240 1c123a34bef33c9cfc3f7f17030e9226 201 Pfam PF03602 Conserved hypothetical protein 95 10 195 1.7E-42 T 11-11-2016 WS_RS09240 1c123a34bef33c9cfc3f7f17030e9226 201 PIRSF PIRSF004553 9 199 9.4E-41 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 WS_RS06670 f5ae86626dc066806fd450eef9bf01e1 378 SUPERFAMILY SSF51430 144 367 2.62E-35 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain WS_RS06670 f5ae86626dc066806fd450eef9bf01e1 378 SUPERFAMILY SSF51430 30 116 2.62E-35 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain WS_RS06670 f5ae86626dc066806fd450eef9bf01e1 378 Pfam PF00248 Aldo/keto reductase family 46 364 8.9E-26 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain WS_RS06670 f5ae86626dc066806fd450eef9bf01e1 378 Gene3D G3DSA:3.20.20.100 28 366 5.0E-35 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain WS_RS10750 b1db7c0139e8ca8848c09de8766d4b68 445 SUPERFAMILY SSF69318 207 270 4.97E-6 T 11-11-2016 WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 Gene3D G3DSA:3.40.50.300 354 566 1.1E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 Pfam PF00664 ABC transporter transmembrane region 27 307 6.0E-18 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 SUPERFAMILY SSF90123 8 337 2.35E-50 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 Gene3D G3DSA:1.20.1560.10 9 336 1.8E-48 T 11-11-2016 WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 SMART SM00382 379 563 4.8E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 SUPERFAMILY SSF52540 349 566 1.84E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09310 bb4912d2802fd424bdccf8c47a7c6182 567 Pfam PF00005 ABC transporter 371 518 1.3E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS08600 215f65c9f6f2c0fac715ae9b80f0e648 271 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 249 1.7E-27 T 11-11-2016 WS_RS08600 215f65c9f6f2c0fac715ae9b80f0e648 271 Gene3D G3DSA:3.40.190.10 6 139 1.9E-17 T 11-11-2016 WS_RS08600 215f65c9f6f2c0fac715ae9b80f0e648 271 SUPERFAMILY SSF53850 6 228 9.85E-25 T 11-11-2016 WS_RS06990 20d2193ca53c6cab747524d41b79bfcc 428 Pfam PF02646 RmuC family 126 417 4.4E-102 T 11-11-2016 IPR003798 DNA recombination RmuC WS_RS04070 91abca4adcf831656f9bfdc35ec95f0c 704 Pfam PF00563 EAL domain 454 688 3.4E-63 T 11-11-2016 IPR001633 EAL domain WS_RS04070 91abca4adcf831656f9bfdc35ec95f0c 704 SUPERFAMILY SSF141868 461 701 5.1E-67 T 11-11-2016 IPR001633 EAL domain WS_RS04070 91abca4adcf831656f9bfdc35ec95f0c 704 SMART SM00052 446 693 1.8E-66 T 11-11-2016 IPR001633 EAL domain WS_RS04070 91abca4adcf831656f9bfdc35ec95f0c 704 Gene3D G3DSA:3.20.20.450 452 700 3.0E-72 T 11-11-2016 IPR001633 EAL domain WS_RS04070 91abca4adcf831656f9bfdc35ec95f0c 704 Pfam PF02378 Phosphotransferase system, EIIC 25 342 2.0E-24 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 23 652 1.7E-296 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 5 654 50.8 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 SUPERFAMILY SSF56801 15 646 1.7E-172 T 11-11-2016 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 11-11-2016 IPR020845 AMP-binding, conserved site WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Gene3D G3DSA:3.40.50.980 269 429 5.7E-29 T 11-11-2016 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Pfam PF00501 AMP-binding enzyme 85 528 1.1E-87 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Gene3D G3DSA:3.30.300.30 523 633 3.5E-24 T 11-11-2016 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Gene3D G3DSA:2.30.38.10 442 522 2.4E-9 T 11-11-2016 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Pfam PF13193 AMP-binding enzyme C-terminal domain 537 619 4.5E-21 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 28 83 4.2E-19 T 11-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 WS_RS02910 38dced88f7b201ae3810c38c7f966b9a 654 Gene3D G3DSA:3.40.50.980 80 268 1.0E-37 T 11-11-2016 WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 PIRSF PIRSF001259 2 292 1.6E-79 T 11-11-2016 WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 SUPERFAMILY SSF142695 205 339 6.93E-18 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 39.626 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 Gene3D G3DSA:3.90.870.10 1 205 2.0E-94 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 198 5.2E-79 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 197 2.0E-84 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 Pfam PF00925 GTP cyclohydrolase II 292 338 6.4E-8 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 WS_RS05840 5df4ead4ed78686e97d439507c673c56 347 SUPERFAMILY SSF55821 2 202 2.06E-83 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain WS_RS02960 3acea2949b684f4fe532ddeb70ad8aa7 80 Gene3D G3DSA:3.30.1280.10 1 78 1.2E-30 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS02960 3acea2949b684f4fe532ddeb70ad8aa7 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 8 77 1.0E-33 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS02960 3acea2949b684f4fe532ddeb70ad8aa7 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 19.962 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS02960 3acea2949b684f4fe532ddeb70ad8aa7 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 78 1.0E-27 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS02960 3acea2949b684f4fe532ddeb70ad8aa7 80 SUPERFAMILY SSF82697 2 78 4.36E-25 T 11-11-2016 WS_RS02960 3acea2949b684f4fe532ddeb70ad8aa7 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 5.7E-29 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 SUPERFAMILY SSF55021 4 78 4.28E-20 T 11-11-2016 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 SUPERFAMILY SSF55021 77 155 2.75E-17 T 11-11-2016 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 Gene3D G3DSA:3.30.70.1150 83 155 1.3E-15 T 11-11-2016 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 Pfam PF01842 ACT domain 6 70 2.0E-11 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 155 1.6E-42 T 11-11-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 Gene3D G3DSA:3.30.70.260 4 79 1.0E-29 T 11-11-2016 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 Pfam PF10369 Small subunit of acetolactate synthase 84 155 1.4E-15 T 11-11-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 WS_RS00485 cbd699c3287782b3b84d08026a48aeeb 156 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 7 77 6.0E-34 T 11-11-2016 WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 238 18.878 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 217 4.6E-68 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 ProSitePatterns PS01218 TatC family signature. 150 169 - T 11-11-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 2.4E-42 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 150 178 2.4E-42 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 2.4E-42 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 2.4E-42 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 WS_RS04170 497c1ccbf178ce9afff05f361bede439 241 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 5 222 3.3E-67 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 WS_RS04620 b6ffdcdedb231280b3b94285790eec59 437 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 158 375 1.1E-8 T 11-11-2016 IPR005565 Haemolysin activator HlyB WS_RS04620 b6ffdcdedb231280b3b94285790eec59 437 Gene3D G3DSA:2.40.160.50 160 419 4.9E-47 T 11-11-2016 WS_RS04620 b6ffdcdedb231280b3b94285790eec59 437 Gene3D G3DSA:3.10.20.310 54 134 8.8E-20 T 11-11-2016 WS_RS04620 b6ffdcdedb231280b3b94285790eec59 437 Pfam PF08479 POTRA domain, ShlB-type 60 134 1.5E-23 T 11-11-2016 IPR013686 Polypeptide-transport-associated, ShlB-type WS_RS00765 5b6e3783d34a03f3a2fbad3db79df76d 299 SUPERFAMILY SSF55729 135 296 2.33E-60 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00765 5b6e3783d34a03f3a2fbad3db79df76d 299 Gene3D G3DSA:3.40.630.30 1 129 2.2E-44 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00765 5b6e3783d34a03f3a2fbad3db79df76d 299 SUPERFAMILY SSF55729 1 134 4.34E-37 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00765 5b6e3783d34a03f3a2fbad3db79df76d 299 PIRSF PIRSF018688 1 298 2.7E-123 T 11-11-2016 IPR016732 Uncharacterised conserved protein UCP018688 WS_RS00765 5b6e3783d34a03f3a2fbad3db79df76d 299 Gene3D G3DSA:3.40.630.30 130 288 1.3E-66 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS00765 5b6e3783d34a03f3a2fbad3db79df76d 299 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 24 292 7.9E-54 T 11-11-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal WS_RS06745 bdec1fbaaa65449aa7d6e5c6378c4849 655 Pfam PF00593 TonB dependent receptor 400 654 3.1E-25 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06745 bdec1fbaaa65449aa7d6e5c6378c4849 655 Gene3D G3DSA:2.40.170.20 148 655 2.7E-59 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06745 bdec1fbaaa65449aa7d6e5c6378c4849 655 SUPERFAMILY SSF56935 39 655 5.86E-81 T 11-11-2016 WS_RS06745 bdec1fbaaa65449aa7d6e5c6378c4849 655 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 638 655 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site WS_RS06745 bdec1fbaaa65449aa7d6e5c6378c4849 655 Gene3D G3DSA:2.170.130.10 41 147 2.3E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS06745 bdec1fbaaa65449aa7d6e5c6378c4849 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 142 1.3E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 SMART SM00739 121 148 5.0E-5 T 11-11-2016 IPR005824 KOW WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 158 167 - T 11-11-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 PRINTS PR00338 Transcription termination factor NUSG signature 133 148 6.0E-19 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 PRINTS PR00338 Transcription termination factor NUSG signature 151 167 6.0E-19 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 6.0E-19 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 Gene3D G3DSA:3.30.70.940 4 112 5.6E-38 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 Gene3D G3DSA:2.30.30.30 115 175 2.6E-28 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 Pfam PF00467 KOW motif 125 148 1.8E-5 T 11-11-2016 IPR005824 KOW WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 175 6.1E-66 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 SMART SM00738 2 110 3.7E-39 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 175 22.786 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 SUPERFAMILY SSF50104 119 175 3.16E-17 T 11-11-2016 IPR008991 Translation protein SH3-like domain WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 SUPERFAMILY SSF82679 3 112 7.46E-33 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 WS_RS02290 124ebf0b343323b5770a1a5ea28601d5 176 Pfam PF02357 Transcription termination factor nusG 4 107 2.5E-23 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 WS_RS01820 902d400f6990976b63218c6d359140c6 437 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 WS_RS01820 902d400f6990976b63218c6d359140c6 437 Pfam PF00072 Response regulator receiver domain 3 110 2.2E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01820 902d400f6990976b63218c6d359140c6 437 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 WS_RS01820 902d400f6990976b63218c6d359140c6 437 Pfam PF00158 Sigma-54 interaction domain 137 302 1.1E-66 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 WS_RS01820 902d400f6990976b63218c6d359140c6 437 SUPERFAMILY SSF46689 386 430 7.17E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01820 902d400f6990976b63218c6d359140c6 437 SMART SM00382 156 299 1.9E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS01820 902d400f6990976b63218c6d359140c6 437 Gene3D G3DSA:1.10.10.60 388 430 2.9E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS01820 902d400f6990976b63218c6d359140c6 437 Gene3D G3DSA:3.40.50.300 135 307 3.4E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01820 902d400f6990976b63218c6d359140c6 437 Gene3D G3DSA:1.10.8.60 308 383 2.6E-21 T 11-11-2016 WS_RS01820 902d400f6990976b63218c6d359140c6 437 SMART SM00448 1 109 1.9E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01820 902d400f6990976b63218c6d359140c6 437 SUPERFAMILY SSF52172 1 180 5.41E-31 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS01820 902d400f6990976b63218c6d359140c6 437 SUPERFAMILY SSF52540 137 377 1.08E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01820 902d400f6990976b63218c6d359140c6 437 Gene3D G3DSA:3.40.50.2300 1 128 2.7E-28 T 11-11-2016 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.8E-84 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 Pfam PF01479 S4 domain 98 145 2.2E-21 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 7.8E-26 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.426 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 SUPERFAMILY SSF55174 2 208 4.45E-70 T 11-11-2016 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 SMART SM00363 98 162 1.1E-20 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 11-11-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 Gene3D G3DSA:1.10.1050.10 1 101 2.8E-42 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 Gene3D G3DSA:3.10.290.10 102 199 1.4E-32 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS07970 b3ee3cbbf3392d696596743aaf15ccf1 208 SMART SM01390 3 97 1.5E-44 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 WS_RS00090 1aceeecc4dc5d51254dbb7d812cb87ab 391 Gene3D G3DSA:3.30.750.80 77 176 3.0E-31 T 11-11-2016 WS_RS00090 1aceeecc4dc5d51254dbb7d812cb87ab 391 SUPERFAMILY SSF53335 78 386 2.95E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00090 1aceeecc4dc5d51254dbb7d812cb87ab 391 SUPERFAMILY SSF88697 1 69 1.49E-11 T 11-11-2016 IPR015947 PUA-like domain WS_RS00090 1aceeecc4dc5d51254dbb7d812cb87ab 391 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 165 301 2.6E-18 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 WS_RS00090 1aceeecc4dc5d51254dbb7d812cb87ab 391 Gene3D G3DSA:3.40.50.150 180 389 2.8E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00090 1aceeecc4dc5d51254dbb7d812cb87ab 391 Gene3D G3DSA:2.30.130.10 1 69 3.8E-14 T 11-11-2016 IPR015947 PUA-like domain WS_RS06030 66a46a1fe48b6a3a8cdf04adcd1d8d97 125 PIRSF PIRSF003230 1 125 2.6E-34 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 WS_RS06030 66a46a1fe48b6a3a8cdf04adcd1d8d97 125 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 108 3.8E-23 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 WS_RS06030 66a46a1fe48b6a3a8cdf04adcd1d8d97 125 Gene3D G3DSA:3.10.129.10 2 123 8.0E-37 T 11-11-2016 IPR029069 HotDog domain WS_RS06030 66a46a1fe48b6a3a8cdf04adcd1d8d97 125 Pfam PF03061 Thioesterase superfamily 13 92 1.7E-14 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 WS_RS06030 66a46a1fe48b6a3a8cdf04adcd1d8d97 125 SUPERFAMILY SSF54637 2 123 7.47E-31 T 11-11-2016 IPR029069 HotDog domain WS_RS06030 66a46a1fe48b6a3a8cdf04adcd1d8d97 125 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 11-11-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 WS_RS03380 057458cf50bbe430c8f7a912d33d8de8 471 SUPERFAMILY SSF58104 171 374 6.28E-46 T 11-11-2016 WS_RS03380 057458cf50bbe430c8f7a912d33d8de8 471 SUPERFAMILY SSF58104 83 110 6.28E-46 T 11-11-2016 WS_RS03380 057458cf50bbe430c8f7a912d33d8de8 471 Gene3D G3DSA:1.10.287.950 172 367 1.8E-42 T 11-11-2016 WS_RS03380 057458cf50bbe430c8f7a912d33d8de8 471 SMART SM00283 141 375 7.1E-16 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS03380 057458cf50bbe430c8f7a912d33d8de8 471 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 222 356 1.1E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 SUPERFAMILY SSF47384 366 443 4.9E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 595 4.9E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 SMART SM00388 385 447 4.7E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 Gene3D G3DSA:1.10.287.130 382 438 6.2E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 385 440 1.4E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 Gene3D G3DSA:3.30.565.10 453 595 8.6E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 SMART SM00387 492 596 9.1E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS10640 d514459f9d18f7bd30a1f8c941fbef8b 597 SUPERFAMILY SSF55874 453 594 3.01E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS08300 66a711032699bdfe86875a0b794cd337 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 574 597 5.9E-45 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 649 676 5.9E-45 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 546 568 5.9E-45 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 289 308 5.9E-45 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 531 5.9E-45 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 431 5.9E-45 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 638 660 - T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 SUPERFAMILY SSF51998 492 776 4.12E-177 T 11-11-2016 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 SUPERFAMILY SSF51998 213 443 4.12E-177 T 11-11-2016 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 139 769 2.3E-188 T 11-11-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 Pfam PF02867 Ribonucleotide reductase, barrel domain 214 765 4.9E-169 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 Gene3D G3DSA:3.20.70.20 494 594 1.7E-74 T 11-11-2016 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 Gene3D G3DSA:3.20.70.20 131 335 1.7E-74 T 11-11-2016 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 Gene3D G3DSA:3.20.70.20 386 432 1.7E-74 T 11-11-2016 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 Gene3D G3DSA:3.20.70.20 649 770 1.7E-74 T 11-11-2016 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 Pfam PF03477 ATP cone domain 3 88 1.5E-15 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 136 210 9.7E-25 T 11-11-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS08300 66a711032699bdfe86875a0b794cd337 788 SUPERFAMILY SSF48168 7 212 1.83E-66 T 11-11-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 SMART SM00959 10 52 1.6E-14 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 Gene3D G3DSA:2.40.50.140 54 122 2.0E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 SMART SM00357 57 123 2.5E-13 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 422 215.197 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 Pfam PF07498 Rho termination factor, N-terminal domain 10 52 2.0E-13 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 SUPERFAMILY SSF50249 54 129 4.91E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 Pfam PF07497 Rho termination factor, RNA-binding domain 57 129 2.4E-28 T 11-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 7 421 4.9E-204 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 Gene3D G3DSA:1.10.720.10 6 52 3.6E-16 T 11-11-2016 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 SMART SM00382 172 366 2.9E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 SUPERFAMILY SSF52540 96 373 2.38E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 Gene3D G3DSA:3.40.50.300 137 419 5.2E-97 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 365 9.9E-20 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS03890 309739b7b6b30ddfdcebd81a53ebfc90 422 SUPERFAMILY SSF68912 6 52 9.02E-10 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 WS_RS08570 78460650795a42efc633a95608cae526 208 Pfam PF01810 LysE type translocator 16 206 4.8E-35 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 WS_RS08570 78460650795a42efc633a95608cae526 208 PIRSF PIRSF006324 1 208 3.5E-51 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 SUPERFAMILY SSF55174 1 55 4.32E-11 T 11-11-2016 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 SMART SM00363 1 59 1.6E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 Pfam PF00849 RNA pseudouridylate synthase 64 208 4.3E-14 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 Gene3D G3DSA:3.10.290.10 1 62 2.7E-16 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 SUPERFAMILY SSF55120 60 256 2.88E-31 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 238 3.8E-45 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 WS_RS09305 781b1dc43b813e47a3c3c099fddfe223 283 Pfam PF01479 S4 domain 1 47 6.6E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 WS_RS02065 aa9e88fc06f6f2eabba99bde5b6652c2 240 SUPERFAMILY SSF56317 9 238 1.28E-38 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS02065 aa9e88fc06f6f2eabba99bde5b6652c2 240 Gene3D G3DSA:3.60.110.10 8 238 6.3E-42 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS02065 aa9e88fc06f6f2eabba99bde5b6652c2 240 Pfam PF00795 Carbon-nitrogen hydrolase 10 233 3.5E-20 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS07485 96176d3f5f4c048553043014ee54c8b0 86 Gene3D G3DSA:1.10.3350.10 5 86 1.4E-24 T 11-11-2016 IPR023126 HP0242-like domain WS_RS07485 96176d3f5f4c048553043014ee54c8b0 86 SUPERFAMILY SSF158752 2 85 1.11E-22 T 11-11-2016 WS_RS07485 96176d3f5f4c048553043014ee54c8b0 86 Pfam PF09442 Domain of unknown function (DUF2018) 8 86 3.9E-23 T 11-11-2016 IPR018563 Protein of unknown function DUF2018 WS_RS02890 34bc4024103e90fe8737803ded15779d 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 715 1.3E-94 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 WS_RS02890 34bc4024103e90fe8737803ded15779d 715 Pfam PF00593 TonB dependent receptor 485 714 1.0E-28 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS02890 34bc4024103e90fe8737803ded15779d 715 Gene3D G3DSA:2.170.130.10 55 181 1.5E-29 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS02890 34bc4024103e90fe8737803ded15779d 715 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 698 715 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site WS_RS02890 34bc4024103e90fe8737803ded15779d 715 Gene3D G3DSA:2.40.170.20 190 715 2.2E-122 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS02890 34bc4024103e90fe8737803ded15779d 715 SUPERFAMILY SSF56935 68 715 1.43E-115 T 11-11-2016 WS_RS02890 34bc4024103e90fe8737803ded15779d 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 173 3.9E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 15.45 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 SUPERFAMILY SSF143034 2 62 1.16E-17 T 11-11-2016 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-11-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.5E-11 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 3.5E-11 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 3.5E-11 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 Pfam PF01632 Ribosomal protein L35 2 61 8.4E-21 T 11-11-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS03955 108c1030c3642a0564a0b4f817c1ba23 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 2.3E-21 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 Gene3D G3DSA:3.40.50.790 70 160 7.9E-42 T 11-11-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 PIRSF PIRSF002155 1 228 1.6E-77 T 11-11-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 11-11-2016 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 SUPERFAMILY SSF56808 7 226 8.5E-82 T 11-11-2016 IPR023674 Ribosomal protein L1-like WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 Pfam PF00687 Ribosomal protein L1p/L10e family 32 221 5.5E-56 T 11-11-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 230 42.634 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 Gene3D G3DSA:3.30.190.20 18 69 2.4E-43 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 Gene3D G3DSA:3.30.190.20 162 227 2.4E-43 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 WS_RS02300 cde2175ff624a075ff6fb7b4dc54b034 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 229 1.1E-103 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 7 133 3.5E-13 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 SUPERFAMILY SSF47323 350 507 1.16E-30 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 349 360 5.3E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 5.3E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 5.3E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 257 272 5.3E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 5.3E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 5.3E-36 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Gene3D G3DSA:1.10.730.10 339 507 2.5E-36 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Gene3D G3DSA:3.40.50.620 228 337 3.1E-75 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Gene3D G3DSA:3.40.50.620 3 113 3.1E-75 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Gene3D G3DSA:2.40.50.140 542 648 8.3E-38 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Pfam PF01588 Putative tRNA binding domain 554 646 1.6E-26 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 506 46.881 T 11-11-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 524 648 4.0E-40 T 11-11-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 507 1.8E-159 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 SUPERFAMILY SSF50249 548 648 2.15E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 SUPERFAMILY SSF52374 2 348 3.49E-110 T 11-11-2016 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Pfam PF09334 tRNA synthetases class I (M) 144 361 9.8E-65 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS01080 31eaa4f06c02eba91fa20de07d1675f1 649 Gene3D G3DSA:2.170.220.10 116 227 7.0E-44 T 11-11-2016 WS_RS03730 3d09db8d80561155c63c93a627f54c2b 482 SUPERFAMILY SSF51905 146 305 8.65E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03730 3d09db8d80561155c63c93a627f54c2b 482 SUPERFAMILY SSF51905 16 114 8.65E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03730 3d09db8d80561155c63c93a627f54c2b 482 Gene3D G3DSA:3.50.50.60 131 313 3.4E-14 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03730 3d09db8d80561155c63c93a627f54c2b 482 Gene3D G3DSA:3.50.50.60 7 57 3.4E-14 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS03730 3d09db8d80561155c63c93a627f54c2b 482 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 1 471 4.6E-204 T 11-11-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 WS_RS03730 3d09db8d80561155c63c93a627f54c2b 482 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 1 476 46.453 T 11-11-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 WS_RS03730 3d09db8d80561155c63c93a627f54c2b 482 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 1 476 3.2E-221 T 11-11-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 Pfam PF02253 Phospholipase A1 128 369 6.5E-89 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 PRINTS PR01486 Bacterial phospholipase A1 protein signature 175 191 1.1E-34 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 PRINTS PR01486 Bacterial phospholipase A1 protein signature 285 303 1.1E-34 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 PRINTS PR01486 Bacterial phospholipase A1 protein signature 321 338 1.1E-34 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 PRINTS PR01486 Bacterial phospholipase A1 protein signature 343 363 1.1E-34 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 PRINTS PR01486 Bacterial phospholipase A1 protein signature 153 170 1.1E-34 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 PRINTS PR01486 Bacterial phospholipase A1 protein signature 198 217 1.1E-34 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 Gene3D G3DSA:2.40.230.10 120 372 1.6E-88 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS10510 bea52040db2835a1a2d44595e48a4bb3 372 SUPERFAMILY SSF56931 121 371 5.75E-84 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 WS_RS05275 8b0b1632aa6b91c9ad61da35f73b68a7 331 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 48 268 2.4E-30 T 11-11-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 WS_RS02035 aa6d3b81ba24336284c59ad34967dcbb 417 Pfam PF02321 Outer membrane efflux protein 235 412 3.1E-27 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS02035 aa6d3b81ba24336284c59ad34967dcbb 417 Pfam PF02321 Outer membrane efflux protein 23 206 2.3E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS02035 aa6d3b81ba24336284c59ad34967dcbb 417 Gene3D G3DSA:1.20.1600.10 11 413 5.7E-55 T 11-11-2016 WS_RS02035 aa6d3b81ba24336284c59ad34967dcbb 417 SUPERFAMILY SSF56954 1 413 4.97E-64 T 11-11-2016 WS_RS04535 93aa0bdffb472972fed90190082b66d8 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS04535 93aa0bdffb472972fed90190082b66d8 262 SUPERFAMILY SSF52540 17 248 3.7E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04535 93aa0bdffb472972fed90190082b66d8 262 Pfam PF00005 ABC transporter 30 187 7.4E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS04535 93aa0bdffb472972fed90190082b66d8 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 16 262 2.6E-119 T 11-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 WS_RS04535 93aa0bdffb472972fed90190082b66d8 262 SMART SM00382 39 237 1.7E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS04535 93aa0bdffb472972fed90190082b66d8 262 Gene3D G3DSA:3.40.50.300 16 254 1.8E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 Pfam PF00209 Sodium:neurotransmitter symporter family 5 118 1.1E-23 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 Pfam PF00209 Sodium:neurotransmitter symporter family 147 440 1.2E-21 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 24 38 - T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 SUPERFAMILY SSF161070 5 441 1.83E-116 T 11-11-2016 WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 8 29 2.9E-13 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 37 56 2.9E-13 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 422 442 2.9E-13 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 WS_RS03585 62e680377b039f4a62f0b5965df06a00 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 294 313 2.9E-13 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 WS_RS04560 299f708797328908113ea18db0866a0a 224 SMART SM00862 148 223 6.5E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04560 299f708797328908113ea18db0866a0a 224 SUPERFAMILY SSF52172 5 180 3.08E-36 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS04560 299f708797328908113ea18db0866a0a 224 Gene3D G3DSA:3.40.50.2300 6 125 2.7E-36 T 11-11-2016 WS_RS04560 299f708797328908113ea18db0866a0a 224 Pfam PF00072 Response regulator receiver domain 6 116 1.4E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04560 299f708797328908113ea18db0866a0a 224 SMART SM00448 4 115 8.5E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04560 299f708797328908113ea18db0866a0a 224 Gene3D G3DSA:1.10.10.10 126 223 1.2E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04560 299f708797328908113ea18db0866a0a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 2.6E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS03750 891b4450acda7841c673b96e51ae32a3 184 SUPERFAMILY SSF48150 2 183 3.06E-69 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS03750 891b4450acda7841c673b96e51ae32a3 184 Gene3D G3DSA:1.10.340.30 2 182 2.3E-71 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS03750 891b4450acda7841c673b96e51ae32a3 184 Pfam PF03352 Methyladenine glycosylase 6 182 4.2E-68 T 11-11-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 WS_RS04885 9bb77c046daf2780c90202739fc41dd4 432 Gene3D G3DSA:3.40.640.10 5 294 8.4E-111 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS04885 9bb77c046daf2780c90202739fc41dd4 432 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 6 430 2.0E-193 T 11-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 WS_RS04885 9bb77c046daf2780c90202739fc41dd4 432 SUPERFAMILY SSF53383 6 430 1.17E-119 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS04885 9bb77c046daf2780c90202739fc41dd4 432 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 WS_RS04885 9bb77c046daf2780c90202739fc41dd4 432 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 429 1.9E-138 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 WS_RS04885 9bb77c046daf2780c90202739fc41dd4 432 PIRSF PIRSF001434 1 432 4.3E-126 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 WS_RS04885 9bb77c046daf2780c90202739fc41dd4 432 Gene3D G3DSA:3.90.1150.10 296 432 4.1E-48 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS04840 6b47f539a1d3d3e32439b57296347f17 272 Pfam PF00899 ThiF family 12 246 2.4E-63 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS04840 6b47f539a1d3d3e32439b57296347f17 272 SUPERFAMILY SSF69572 3 251 4.71E-96 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS04840 6b47f539a1d3d3e32439b57296347f17 272 Gene3D G3DSA:3.40.50.720 4 249 5.6E-78 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 Pfam PF12833 Helix-turn-helix domain 174 250 1.4E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 SUPERFAMILY SSF51215 9 125 7.45E-15 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 Pfam PF02311 AraC-like ligand binding domain 14 124 7.6E-13 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 SUPERFAMILY SSF46689 205 252 1.12E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 Gene3D G3DSA:1.10.10.60 151 206 1.3E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 Gene3D G3DSA:1.10.10.60 207 250 3.6E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 SMART SM00342 168 250 1.7E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS05535 ec588a4be739dfe5eb1bc97d8fa669aa 255 Gene3D G3DSA:2.60.120.280 12 127 1.7E-12 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 WS_RS00225 e8e30a592ca29d4eec17d64564c65d53 374 Pfam PF13692 Glycosyl transferases group 1 203 336 9.0E-19 T 11-11-2016 WS_RS00225 e8e30a592ca29d4eec17d64564c65d53 374 Pfam PF13439 Glycosyltransferase Family 4 18 180 1.0E-16 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS00225 e8e30a592ca29d4eec17d64564c65d53 374 Gene3D G3DSA:3.40.50.2000 168 337 1.3E-17 T 11-11-2016 WS_RS00225 e8e30a592ca29d4eec17d64564c65d53 374 SUPERFAMILY SSF53756 14 363 4.4E-59 T 11-11-2016 WS_RS05830 b5637e082f46552c4e9ea0b0e1ffd9d5 226 SUPERFAMILY SSF53335 1 212 2.89E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05830 b5637e082f46552c4e9ea0b0e1ffd9d5 226 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 1 225 5.9E-76 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 WS_RS05830 b5637e082f46552c4e9ea0b0e1ffd9d5 226 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 223 2.3E-51 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 WS_RS05830 b5637e082f46552c4e9ea0b0e1ffd9d5 226 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 225 30.789 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 WS_RS05830 b5637e082f46552c4e9ea0b0e1ffd9d5 226 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 132 146 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 WS_RS05830 b5637e082f46552c4e9ea0b0e1ffd9d5 226 Gene3D G3DSA:3.40.50.150 1 218 1.2E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05830 b5637e082f46552c4e9ea0b0e1ffd9d5 226 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 9 24 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 WS_RS08265 efc33d7f4c618a9d43ee6835069ac0fb 183 Pfam PF02169 LPP20 lipoprotein 83 158 1.1E-7 T 11-11-2016 IPR024952 Lipoprotein LPP20-like WS_RS02930 326fc940961061328a0a3cafdbff1c58 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.6E-34 T 11-11-2016 IPR007436 Protein of unknown function DUF485 WS_RS03240 6afbc1c673a6f72ec9ba16bc1e85c6f0 121 Gene3D G3DSA:3.90.1520.10 1 117 2.3E-4 T 11-11-2016 WS_RS04245 e2269808655cb95b2bff781158ff8f22 236 Pfam PF00691 OmpA family 100 192 8.0E-9 T 11-11-2016 IPR006665 OmpA-like domain WS_RS04245 e2269808655cb95b2bff781158ff8f22 236 Gene3D G3DSA:3.30.1330.60 88 218 2.0E-15 T 11-11-2016 IPR006665 OmpA-like domain WS_RS04245 e2269808655cb95b2bff781158ff8f22 236 SUPERFAMILY SSF103088 88 217 1.14E-11 T 11-11-2016 IPR006665 OmpA-like domain WS_RS02555 f4cbceadd9eee54a6b26dd2f9fe62eba 111 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 110 1.6E-20 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 WS_RS08825 64ce5079fe411d7e70aa67a3c8f88232 268 PIRSF PIRSF003092 1 268 3.1E-86 T 11-11-2016 IPR025501 ATP binding protein MinD WS_RS08825 64ce5079fe411d7e70aa67a3c8f88232 268 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 1.3E-29 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain WS_RS08825 64ce5079fe411d7e70aa67a3c8f88232 268 Gene3D G3DSA:3.40.50.300 2 245 6.9E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08825 64ce5079fe411d7e70aa67a3c8f88232 268 SUPERFAMILY SSF52540 1 248 2.05E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08825 64ce5079fe411d7e70aa67a3c8f88232 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 267 1.6E-115 T 11-11-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 WS_RS01560 17cc35348957c48601e39f0f3287b041 368 Gene3D G3DSA:1.20.1250.20 6 171 7.8E-9 T 11-11-2016 WS_RS01560 17cc35348957c48601e39f0f3287b041 368 PIRSF PIRSF004925 1 367 2.6E-63 T 11-11-2016 IPR026032 Probable 3-phenylpropionic acid transporter WS_RS01560 17cc35348957c48601e39f0f3287b041 368 SUPERFAMILY SSF103473 7 364 3.01E-23 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS01560 17cc35348957c48601e39f0f3287b041 368 Gene3D G3DSA:1.20.1250.20 197 360 4.3E-13 T 11-11-2016 WS_RS01560 17cc35348957c48601e39f0f3287b041 368 Pfam PF12832 MFS_1 like family 7 342 1.9E-32 T 11-11-2016 IPR024989 Major facilitator superfamily associated domain WS_RS01295 b02d601f6ede474b87cacc1628345492 66 Pfam PF04316 Anti-sigma-28 factor, FlgM 14 58 8.4E-7 T 11-11-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal WS_RS01295 b02d601f6ede474b87cacc1628345492 66 SUPERFAMILY SSF101498 17 59 5.23E-7 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 206 217 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 Gene3D G3DSA:1.10.1060.10 32 60 1.4E-8 T 11-11-2016 WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 Gene3D G3DSA:1.10.1060.10 102 179 5.7E-4 T 11-11-2016 WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 Pfam PF12838 4Fe-4S dicluster domain 52 107 2.0E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 Gene3D G3DSA:3.30.70.20 61 101 1.7E-10 T 11-11-2016 WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 SUPERFAMILY SSF54862 45 225 3.19E-20 T 11-11-2016 WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 Gene3D G3DSA:3.30.70.20 180 227 3.7E-8 T 11-11-2016 WS_RS04410 d453a24ce6004236889d150df34e7ae6 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS04975 88e1f929b07f842e79cf7d6371a9fd68 393 Gene3D G3DSA:3.40.50.2300 40 238 4.4E-50 T 11-11-2016 WS_RS04975 88e1f929b07f842e79cf7d6371a9fd68 393 SUPERFAMILY SSF53822 40 389 5.59E-76 T 11-11-2016 IPR028082 Periplasmic binding protein-like I WS_RS04975 88e1f929b07f842e79cf7d6371a9fd68 393 Pfam PF13458 Periplasmic binding protein 40 384 9.6E-66 T 11-11-2016 IPR028081 Leucine-binding protein domain WS_RS00985 892b8f36338a3618c799360116ebc421 271 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 156 180 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 Pfam PF00318 Ribosomal protein S2 7 222 3.1E-96 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 Gene3D G3DSA:3.40.50.10490 156 243 3.2E-66 T 11-11-2016 WS_RS00985 892b8f36338a3618c799360116ebc421 271 Gene3D G3DSA:3.40.50.10490 21 97 3.2E-66 T 11-11-2016 WS_RS00985 892b8f36338a3618c799360116ebc421 271 PRINTS PR00395 Ribosomal protein S2 signature 35 44 2.3E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 PRINTS PR00395 Ribosomal protein S2 signature 156 173 2.3E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 PRINTS PR00395 Ribosomal protein S2 signature 173 184 2.3E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 PRINTS PR00395 Ribosomal protein S2 signature 194 208 2.3E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 PRINTS PR00395 Ribosomal protein S2 signature 85 102 2.3E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 PRINTS PR00395 Ribosomal protein S2 signature 4 22 2.3E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 WS_RS00985 892b8f36338a3618c799360116ebc421 271 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 223 5.9E-111 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 WS_RS00985 892b8f36338a3618c799360116ebc421 271 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 40.232 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 WS_RS00985 892b8f36338a3618c799360116ebc421 271 SUPERFAMILY SSF52313 4 226 7.46E-94 T 11-11-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain WS_RS00985 892b8f36338a3618c799360116ebc421 271 Gene3D G3DSA:1.10.287.610 98 150 7.8E-24 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.8E-14 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.8E-14 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 7.8E-14 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.0E-35 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.0E-35 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.0E-35 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.0E-35 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00097 Anthranilate synthase component II signature 120 132 2.0E-35 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.0E-35 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 Pfam PF00117 Glutamine amidotransferase class-I 4 187 3.2E-50 T 11-11-2016 IPR017926 Glutamine amidotransferase WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 189 8.9E-73 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 SUPERFAMILY SSF52317 1 188 2.39E-55 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.8E-6 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.8E-6 T 11-11-2016 WS_RS10230 9761ff17c67b1aabed770dc2091e0bc4 190 Gene3D G3DSA:3.40.50.880 1 188 1.9E-65 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS07730 54c3b25274eabfaf4d8d8b1e841e519e 289 Gene3D G3DSA:3.40.50.300 22 263 3.0E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07730 54c3b25274eabfaf4d8d8b1e841e519e 289 PIRSF PIRSF003092 1 289 1.5E-70 T 11-11-2016 IPR025501 ATP binding protein MinD WS_RS07730 54c3b25274eabfaf4d8d8b1e841e519e 289 SUPERFAMILY SSF52540 24 270 4.98E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07730 54c3b25274eabfaf4d8d8b1e841e519e 289 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 24 262 1.2E-26 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 3.0E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 309 5.3E-140 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 Gene3D G3DSA:3.90.226.10 51 262 4.8E-44 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 307 43.83 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 1.1E-43 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 1.1E-43 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 1.1E-43 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 1.1E-43 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 1.1E-43 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 1.1E-43 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS03065 d30e4f21f9c2bda53c8ab7910f23b763 311 SUPERFAMILY SSF52096 28 307 8.81E-82 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS00720 cbc5317485d28298ff35af999604d841 408 SUPERFAMILY SSF49265 138 300 3.78E-14 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 WS_RS00720 cbc5317485d28298ff35af999604d841 408 Gene3D G3DSA:2.60.40.10 132 222 1.1E-10 T 11-11-2016 IPR013783 Immunoglobulin-like fold WS_RS00720 cbc5317485d28298ff35af999604d841 408 SUPERFAMILY SSF49265 43 162 1.6E-8 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 WS_RS00720 cbc5317485d28298ff35af999604d841 408 SUPERFAMILY SSF49265 305 405 7.94E-8 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 WS_RS00720 cbc5317485d28298ff35af999604d841 408 SMART SM00060 30 113 8.7 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 WS_RS00720 cbc5317485d28298ff35af999604d841 408 SMART SM00060 314 392 3.1 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 WS_RS00720 cbc5317485d28298ff35af999604d841 408 SMART SM00060 220 299 3.9 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 WS_RS00720 cbc5317485d28298ff35af999604d841 408 SMART SM00060 126 205 2.9 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 WS_RS00720 cbc5317485d28298ff35af999604d841 408 Gene3D G3DSA:2.60.40.10 40 122 4.2E-10 T 11-11-2016 IPR013783 Immunoglobulin-like fold WS_RS00720 cbc5317485d28298ff35af999604d841 408 Gene3D G3DSA:2.60.40.10 324 400 3.4E-11 T 11-11-2016 IPR013783 Immunoglobulin-like fold WS_RS00720 cbc5317485d28298ff35af999604d841 408 Gene3D G3DSA:2.60.40.10 234 300 1.1E-11 T 11-11-2016 IPR013783 Immunoglobulin-like fold WS_RS05400 ba394906d32b29d05060fec15e6dfd46 339 SUPERFAMILY SSF53807 23 337 3.89E-50 T 11-11-2016 WS_RS05400 ba394906d32b29d05060fec15e6dfd46 339 Gene3D G3DSA:3.40.50.1980 41 159 1.7E-17 T 11-11-2016 WS_RS05400 ba394906d32b29d05060fec15e6dfd46 339 Gene3D G3DSA:3.40.50.1980 160 308 3.0E-22 T 11-11-2016 WS_RS05400 ba394906d32b29d05060fec15e6dfd46 339 Pfam PF01497 Periplasmic binding protein 87 275 1.0E-23 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 WS_RS04720 f2b043210f8f5b20f95aac23b61c7796 309 SUPERFAMILY SSF161098 93 292 7.85E-16 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04720 f2b043210f8f5b20f95aac23b61c7796 309 Gene3D G3DSA:1.10.3720.10 92 303 6.4E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04720 f2b043210f8f5b20f95aac23b61c7796 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 305 7.0E-39 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS01950 28f687d86a6585bfb70a0048f660a40a 236 Pfam PF03473 MOSC domain 57 170 6.4E-15 T 11-11-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 WS_RS01950 28f687d86a6585bfb70a0048f660a40a 236 SUPERFAMILY SSF50800 2 228 2.25E-60 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain WS_RS01950 28f687d86a6585bfb70a0048f660a40a 236 Gene3D G3DSA:2.40.33.20 8 223 9.3E-61 T 11-11-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 Pfam PF00664 ABC transporter transmembrane region 25 285 1.0E-20 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 SMART SM00382 362 548 8.4E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 Gene3D G3DSA:1.20.1560.10 12 326 3.3E-39 T 11-11-2016 WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 SUPERFAMILY SSF52540 330 571 1.04E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 SUPERFAMILY SSF90123 12 326 7.72E-46 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 Gene3D G3DSA:3.40.50.300 335 567 1.4E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06050 e41eb994f47e8e7f802c7a88dda7d122 587 Pfam PF00005 ABC transporter 353 502 1.7E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS09340 64328582511907a5687387019fa55d74 315 SUPERFAMILY SSF52540 5 287 2.04E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09340 64328582511907a5687387019fa55d74 315 Gene3D G3DSA:3.40.50.300 17 178 6.9E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09340 64328582511907a5687387019fa55d74 315 Gene3D G3DSA:1.10.8.300 198 311 1.2E-36 T 11-11-2016 WS_RS09340 64328582511907a5687387019fa55d74 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 1.1E-63 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 WS_RS09340 64328582511907a5687387019fa55d74 315 PIRSF PIRSF002849 1 315 8.6E-123 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 SUPERFAMILY SSF90123 5 322 2.75E-78 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 SUPERFAMILY SSF52540 332 565 4.75E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 Pfam PF00664 ABC transporter transmembrane region 20 288 4.0E-49 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 Gene3D G3DSA:3.40.50.300 334 555 1.0E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 SMART SM00382 358 551 6.7E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 Gene3D G3DSA:1.20.1560.10 5 318 2.6E-80 T 11-11-2016 WS_RS01270 ee9b27b1785fbf6dabfc787a6696587f 569 Pfam PF00005 ABC transporter 349 497 1.3E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 Gene3D G3DSA:3.10.580.10 191 316 9.5E-28 T 11-11-2016 WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 PIRSF PIRSF004692 2 320 4.2E-124 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 Pfam PF00571 CBS domain 197 253 1.7E-8 T 11-11-2016 IPR000644 CBS domain WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 Pfam PF00571 CBS domain 265 317 8.4E-4 T 11-11-2016 IPR000644 CBS domain WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 Pfam PF01380 SIS domain 39 167 1.0E-25 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 Gene3D G3DSA:3.40.50.10490 6 190 5.3E-46 T 11-11-2016 WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 310 6.6E-107 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 SUPERFAMILY SSF53697 6 274 1.47E-55 T 11-11-2016 WS_RS00320 61ca03d9cfbeb95913284c96ff649ec3 320 SMART SM00116 205 253 2.0E-5 T 11-11-2016 IPR000644 CBS domain WS_RS00600 9f0bbcbad2fb8df24509d668ca6f2b2a 359 SUPERFAMILY SSF58104 65 279 9.29E-50 T 11-11-2016 WS_RS00600 9f0bbcbad2fb8df24509d668ca6f2b2a 359 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 100 256 1.6E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS00600 9f0bbcbad2fb8df24509d668ca6f2b2a 359 Gene3D G3DSA:1.10.287.950 65 259 1.4E-47 T 11-11-2016 WS_RS00600 9f0bbcbad2fb8df24509d668ca6f2b2a 359 SMART SM00283 38 296 5.1E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS00600 9f0bbcbad2fb8df24509d668ca6f2b2a 359 Pfam PF13682 Chemoreceptor zinc-binding domain 258 318 3.6E-6 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain WS_RS07745 78ccf3f67089d8414658016b151bede3 340 Pfam PF00557 Metallopeptidase family M24 119 334 3.2E-60 T 11-11-2016 IPR000994 Peptidase M24, structural domain WS_RS07745 78ccf3f67089d8414658016b151bede3 340 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 280 292 - T 11-11-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site WS_RS07745 78ccf3f67089d8414658016b151bede3 340 Gene3D G3DSA:3.90.230.10 111 340 2.5E-80 T 11-11-2016 IPR000994 Peptidase M24, structural domain WS_RS07745 78ccf3f67089d8414658016b151bede3 340 SUPERFAMILY SSF55920 68 340 2.22E-63 T 11-11-2016 IPR000994 Peptidase M24, structural domain WS_RS07745 78ccf3f67089d8414658016b151bede3 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 210 3.5E-5 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase WS_RS07745 78ccf3f67089d8414658016b151bede3 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 172 185 3.5E-5 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase WS_RS07745 78ccf3f67089d8414658016b151bede3 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 302 314 3.5E-5 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase WS_RS07745 78ccf3f67089d8414658016b151bede3 340 Gene3D G3DSA:3.40.350.10 5 101 4.3E-4 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal WS_RS07060 7c0138f630ac03fc805033c0750e5d00 374 Gene3D G3DSA:3.40.640.10 39 251 3.1E-44 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS07060 7c0138f630ac03fc805033c0750e5d00 374 SUPERFAMILY SSF53383 27 367 1.45E-64 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS07060 7c0138f630ac03fc805033c0750e5d00 374 Gene3D G3DSA:3.90.1150.10 252 369 2.5E-16 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS07060 7c0138f630ac03fc805033c0750e5d00 374 Pfam PF00155 Aminotransferase class I and II 26 365 3.2E-31 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 WS_RS07870 16c6a7d3163019e0a9eacbbf41c6a092 479 SMART SM00283 151 408 8.8E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS07870 16c6a7d3163019e0a9eacbbf41c6a092 479 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 250 277 2.8E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS07870 16c6a7d3163019e0a9eacbbf41c6a092 479 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 2.8E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS07870 16c6a7d3163019e0a9eacbbf41c6a092 479 Gene3D G3DSA:1.10.287.950 171 370 2.0E-48 T 11-11-2016 WS_RS07870 16c6a7d3163019e0a9eacbbf41c6a092 479 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 219 378 1.3E-35 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS07870 16c6a7d3163019e0a9eacbbf41c6a092 479 SUPERFAMILY SSF58104 172 377 1.44E-52 T 11-11-2016 WS_RS07870 16c6a7d3163019e0a9eacbbf41c6a092 479 SUPERFAMILY SSF58104 84 111 1.44E-52 T 11-11-2016 WS_RS07095 c57e1d762e533c16fdb64b03ce9b35e4 287 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 3 267 35.595 T 11-11-2016 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 WS_RS07095 c57e1d762e533c16fdb64b03ce9b35e4 287 Pfam PF02621 Menaquinone biosynthesis 4 262 2.6E-77 T 11-11-2016 IPR003773 Menaquinone biosynthesis enzyme WS_RS07095 c57e1d762e533c16fdb64b03ce9b35e4 287 SUPERFAMILY SSF53850 4 263 2.39E-73 T 11-11-2016 WS_RS07095 c57e1d762e533c16fdb64b03ce9b35e4 287 Gene3D G3DSA:3.40.190.10 79 157 4.3E-4 T 11-11-2016 WS_RS08315 413e6a9d89c0768d38abd4ef8c02c8cf 185 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 16 176 1.3E-54 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS08315 413e6a9d89c0768d38abd4ef8c02c8cf 185 SUPERFAMILY SSF117457 7 176 1.96E-62 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS08315 413e6a9d89c0768d38abd4ef8c02c8cf 185 Gene3D G3DSA:3.20.130.10 4 176 8.1E-72 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS08315 413e6a9d89c0768d38abd4ef8c02c8cf 185 Pfam PF05683 Fumarase C-terminus 8 176 1.0E-60 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS06775 80c17a41a9cc18b30f41b615b29295d8 157 Gene3D G3DSA:1.10.1740.10 1 88 3.2E-12 T 11-11-2016 WS_RS06775 80c17a41a9cc18b30f41b615b29295d8 157 Gene3D G3DSA:1.10.10.10 91 152 1.2E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS06775 80c17a41a9cc18b30f41b615b29295d8 157 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 149 4.3E-24 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS06775 80c17a41a9cc18b30f41b615b29295d8 157 Pfam PF08281 Sigma-70, region 4 95 146 8.1E-16 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS06775 80c17a41a9cc18b30f41b615b29295d8 157 Pfam PF04542 Sigma-70 region 2 1 68 1.7E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS06775 80c17a41a9cc18b30f41b615b29295d8 157 SUPERFAMILY SSF88946 1 77 3.65E-13 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS06775 80c17a41a9cc18b30f41b615b29295d8 157 SUPERFAMILY SSF88659 89 151 4.36E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Pfam PF00384 Molybdopterin oxidoreductase 111 557 6.7E-64 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Gene3D G3DSA:3.40.228.10 184 362 1.2E-64 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 SUPERFAMILY SSF53706 54 626 7.59E-193 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 SUPERFAMILY SSF50692 740 769 4.02E-36 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 SUPERFAMILY SSF50692 801 939 4.02E-36 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Gene3D G3DSA:3.40.50.740 431 639 8.7E-36 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Gene3D G3DSA:3.40.50.740 363 390 8.7E-36 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 28 8.8E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 SMART SM00926 54 108 4.1E-16 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Gene3D G3DSA:2.20.25.90 55 113 5.4E-17 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 55 105 8.4E-14 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Gene3D G3DSA:2.40.40.20 640 660 1.2E-51 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Gene3D G3DSA:2.40.40.20 755 766 1.2E-51 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Gene3D G3DSA:2.40.40.20 800 939 1.2E-51 T 11-11-2016 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 Pfam PF01568 Molydopterin dinucleotide binding domain 806 930 8.9E-20 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 WS_RS05490 be8f12c4fc44c48afd8b1ceb6af2a6f3 939 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 76 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 WS_RS01170 de8b6927d1fff0b29e01b9b299aefa9b 394 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 12 365 1.5E-50 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) WS_RS01170 de8b6927d1fff0b29e01b9b299aefa9b 394 SUPERFAMILY SSF56935 19 394 1.65E-71 T 11-11-2016 WS_RS01170 de8b6927d1fff0b29e01b9b299aefa9b 394 Gene3D G3DSA:2.40.160.60 19 394 4.2E-100 T 11-11-2016 WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 SMART SM00091 291 359 0.0025 T 11-11-2016 IPR000014 PAS domain WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 Gene3D G3DSA:3.30.450.20 304 406 2.7E-29 T 11-11-2016 WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 Gene3D G3DSA:3.30.450.20 42 191 8.7E-24 T 11-11-2016 WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 Gene3D G3DSA:3.30.70.270 416 576 4.2E-47 T 11-11-2016 WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 SUPERFAMILY SSF55785 308 404 5.96E-30 T 11-11-2016 IPR000014 PAS domain WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 Pfam PF08269 Cache domain 46 207 8.3E-19 T 11-11-2016 IPR004010 Double Cache domain 2 WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 575 3.9E-45 T 11-11-2016 IPR000160 GGDEF domain WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 411 576 2.8E-44 T 11-11-2016 IPR000160 GGDEF domain WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 SUPERFAMILY SSF55073 419 576 1.33E-43 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 Pfam PF08447 PAS fold 316 399 1.3E-16 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 SMART SM00267 403 579 6.4E-53 T 11-11-2016 IPR000160 GGDEF domain WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 294 412 5.4E-24 T 11-11-2016 IPR000014 PAS domain WS_RS10635 6ce834a8a54030b8d484cbbb0abd3d2d 583 SMART SM00086 365 407 2.4E-8 T 11-11-2016 IPR001610 PAC motif WS_RS04770 cfd74da40fe1c605c42bc7f96a5109bf 118 SUPERFAMILY SSF51182 69 118 5.67E-5 T 11-11-2016 IPR011051 RmlC-like cupin domain WS_RS04770 cfd74da40fe1c605c42bc7f96a5109bf 118 Gene3D G3DSA:2.60.120.10 59 117 7.4E-5 T 11-11-2016 IPR014710 RmlC-like jelly roll fold WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 PIRSF PIRSF000498 1 197 2.0E-60 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 187 1.5E-55 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 Pfam PF00677 Lumazine binding domain 90 174 3.4E-21 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 Pfam PF00677 Lumazine binding domain 3 68 5.2E-12 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 Gene3D G3DSA:2.40.30.20 4 94 1.2E-18 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 Gene3D G3DSA:2.40.30.20 95 186 6.1E-30 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 SUPERFAMILY SSF63380 83 185 6.72E-30 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 WS_RS09785 68d783f0f8e432a3f3cea247be4b4da0 202 SUPERFAMILY SSF63380 1 83 9.35E-14 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 Gene3D G3DSA:2.40.50.140 5 147 1.4E-41 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 492 4.6E-82 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 10 496 42.471 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 Gene3D G3DSA:3.30.930.10 149 491 7.4E-115 T 11-11-2016 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 Pfam PF01336 OB-fold nucleic acid binding domain 62 138 1.2E-14 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 4 495 9.7E-203 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 2.0E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 2.0E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 2.0E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 2.0E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 2.0E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 SUPERFAMILY SSF50249 5 147 9.55E-35 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS00400 ff63fae6c58db4cef684cfe6f7c266aa 507 SUPERFAMILY SSF55681 154 492 1.1E-116 T 11-11-2016 WS_RS04365 9aaafdc7a650196754a8de03702211a2 325 Gene3D G3DSA:3.40.190.10 106 201 2.1E-13 T 11-11-2016 WS_RS04365 9aaafdc7a650196754a8de03702211a2 325 SUPERFAMILY SSF53850 36 318 4.51E-31 T 11-11-2016 WS_RS04365 9aaafdc7a650196754a8de03702211a2 325 PIRSF PIRSF027386 2 323 3.0E-92 T 11-11-2016 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type WS_RS04365 9aaafdc7a650196754a8de03702211a2 325 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 36 240 4.1E-9 T 11-11-2016 WS_RS09790 65f9f7f99f8bc95c8385129b7cfff548 89 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 78 1.1E-17 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 WS_RS09790 65f9f7f99f8bc95c8385129b7cfff548 89 SUPERFAMILY SSF160544 3 83 4.19E-22 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal WS_RS09790 65f9f7f99f8bc95c8385129b7cfff548 89 Gene3D G3DSA:3.40.1690.10 6 83 1.9E-22 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal WS_RS06515 564813fd2c5862b32d56e9ecf8870122 379 SUPERFAMILY SSF103473 5 376 2.49E-53 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS06515 564813fd2c5862b32d56e9ecf8870122 379 Gene3D G3DSA:1.20.1250.20 6 182 1.7E-22 T 11-11-2016 WS_RS06515 564813fd2c5862b32d56e9ecf8870122 379 Gene3D G3DSA:1.20.1250.20 199 376 1.4E-18 T 11-11-2016 WS_RS06515 564813fd2c5862b32d56e9ecf8870122 379 Pfam PF07690 Major Facilitator Superfamily 12 225 7.8E-25 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 SUPERFAMILY SSF51905 1 185 8.47E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 7.9E-10 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 7.9E-10 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 7.9E-10 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.1E-9 T 11-11-2016 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.1E-9 T 11-11-2016 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 195 1.2E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS09635 e8642e70a0ada4e23fc690bcf5ad972e 199 Gene3D G3DSA:3.50.50.60 1 182 3.6E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS04175 eecb3ae9de483c241c50a92c21db5ecf 146 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 4.8E-21 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 WS_RS04175 eecb3ae9de483c241c50a92c21db5ecf 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.4E-14 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 WS_RS04175 eecb3ae9de483c241c50a92c21db5ecf 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.4E-14 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 WS_RS04175 eecb3ae9de483c241c50a92c21db5ecf 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.4E-14 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 WS_RS04175 eecb3ae9de483c241c50a92c21db5ecf 146 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 133 14.926 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 WS_RS04175 eecb3ae9de483c241c50a92c21db5ecf 146 Pfam PF02416 mttA/Hcf106 family 4 53 1.2E-5 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 34 104 1.1E-21 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 Gene3D G3DSA:2.30.330.10 26 111 1.9E-26 T 11-11-2016 WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 50 66 3.9E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 79 94 3.9E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 33 49 3.9E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 66 79 3.9E-21 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 SUPERFAMILY SSF101801 31 106 1.44E-19 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) WS_RS05080 4c61eed0431940c0eb9f36ed624e764c 117 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 30 105 3.1E-26 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 WS_RS05540 f3150a0e4407248ad811d7cb682aa94c 252 Pfam PF04016 Putative heavy-metal chelation 117 224 1.6E-27 T 11-11-2016 IPR007161 Putative heavy-metal chelation domain WS_RS05540 f3150a0e4407248ad811d7cb682aa94c 252 SUPERFAMILY SSF159713 6 224 4.05E-25 T 11-11-2016 WS_RS04030 78850f7365dc686fa6935c2503b06348 444 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 442 2.4E-171 T 11-11-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 WS_RS04030 78850f7365dc686fa6935c2503b06348 444 Gene3D G3DSA:3.40.640.10 123 307 1.4E-22 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS04030 78850f7365dc686fa6935c2503b06348 444 SUPERFAMILY SSF53383 72 443 1.17E-42 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS04030 78850f7365dc686fa6935c2503b06348 444 Pfam PF03841 L-seryl-tRNA selenium transferase 76 428 7.2E-136 T 11-11-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 WS_RS04030 78850f7365dc686fa6935c2503b06348 444 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 444 188.925 T 11-11-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 SUPERFAMILY SSF53686 10 481 3.5E-126 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 Gene3D G3DSA:3.90.1380.10 3 86 3.2E-13 T 11-11-2016 IPR029144 Threonine synthase, N-terminal WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 TIGRFAM TIGR00260 thrC: threonine synthase 70 429 4.6E-78 T 11-11-2016 IPR004450 Threonine synthase-like WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 Pfam PF14821 Threonine synthase N terminus 4 74 3.7E-8 T 11-11-2016 IPR029144 Threonine synthase, N-terminal WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 Gene3D G3DSA:3.40.50.1100 205 430 1.5E-72 T 11-11-2016 WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 Gene3D G3DSA:3.40.50.1100 129 204 1.4E-5 T 11-11-2016 WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 90 410 1.0E-17 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS09955 8abdf9403680043f6dbf3178afe9d6f0 482 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 104 118 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 WS_RS04555 a453c6391cf22c8880c70fa074b20bc7 585 SMART SM00283 321 584 1.3E-23 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04555 a453c6391cf22c8880c70fa074b20bc7 585 Gene3D G3DSA:1.10.287.950 344 540 4.5E-39 T 11-11-2016 WS_RS04555 a453c6391cf22c8880c70fa074b20bc7 585 SUPERFAMILY SSF58104 279 584 2.79E-46 T 11-11-2016 WS_RS04555 a453c6391cf22c8880c70fa074b20bc7 585 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 396 570 6.6E-32 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS02100 4eb1806926766ca7b018326543bffe18 302 Gene3D G3DSA:3.40.50.410 81 244 6.7E-13 T 11-11-2016 IPR002035 von Willebrand factor, type A WS_RS02100 4eb1806926766ca7b018326543bffe18 302 Pfam PF13519 von Willebrand factor type A domain 82 187 2.0E-16 T 11-11-2016 IPR002035 von Willebrand factor, type A WS_RS02100 4eb1806926766ca7b018326543bffe18 302 SMART SM00327 77 246 3.3E-8 T 11-11-2016 IPR002035 von Willebrand factor, type A WS_RS02100 4eb1806926766ca7b018326543bffe18 302 SUPERFAMILY SSF53300 81 242 7.86E-22 T 11-11-2016 IPR002035 von Willebrand factor, type A WS_RS01645 e5f2e42dee894c445ab06212be5f0b72 396 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 396 123.312 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 WS_RS01645 e5f2e42dee894c445ab06212be5f0b72 396 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 7 396 3.7E-120 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 WS_RS01645 e5f2e42dee894c445ab06212be5f0b72 396 Gene3D G3DSA:3.60.70.12 8 267 2.4E-84 T 11-11-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 WS_RS01645 e5f2e42dee894c445ab06212be5f0b72 396 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 396 0.0 T 11-11-2016 WS_RS01645 e5f2e42dee894c445ab06212be5f0b72 396 SUPERFAMILY SSF56266 14 393 1.7E-122 T 11-11-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 WS_RS01645 e5f2e42dee894c445ab06212be5f0b72 396 Pfam PF01960 ArgJ family 19 396 4.8E-130 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 WS_RS10265 cb5ade080d89eeaab2acd4e0ce481784 205 SUPERFAMILY SSF52317 46 183 4.58E-23 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS10265 cb5ade080d89eeaab2acd4e0ce481784 205 Pfam PF07722 Peptidase C26 137 181 1.8E-6 T 11-11-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 WS_RS10265 cb5ade080d89eeaab2acd4e0ce481784 205 Pfam PF07722 Peptidase C26 55 116 1.2E-8 T 11-11-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 WS_RS10265 cb5ade080d89eeaab2acd4e0ce481784 205 Gene3D G3DSA:3.40.50.880 51 194 4.0E-20 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS02450 1ed788456fb85207b6bc320e5533ee4e 204 SUPERFAMILY SSF53639 4 192 3.34E-28 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal WS_RS02450 1ed788456fb85207b6bc320e5533ee4e 204 SMART SM01007 7 184 1.6E-20 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal WS_RS02450 1ed788456fb85207b6bc320e5533ee4e 204 Gene3D G3DSA:3.40.225.10 3 193 2.0E-18 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal WS_RS02450 1ed788456fb85207b6bc320e5533ee4e 204 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 183 3.1E-22 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal WS_RS10560 b80ce1d7bbe42dc65f784d5c2693e7db 306 Gene3D G3DSA:3.60.21.10 10 216 4.2E-39 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS10560 b80ce1d7bbe42dc65f784d5c2693e7db 306 SUPERFAMILY SSF56300 12 246 1.97E-34 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like WS_RS10560 b80ce1d7bbe42dc65f784d5c2693e7db 306 Pfam PF00149 Calcineurin-like phosphoesterase 11 140 1.5E-12 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 WS_RS07660 c11d898a4e77b0f131aad2f2e899fe7c 234 Pfam PF01925 Sulfite exporter TauE/SafE 1 227 4.3E-43 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 Gene3D G3DSA:1.10.580.10 53 284 3.4E-81 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 PIRSF PIRSF001369 37 422 5.2E-134 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 8.4E-148 T 11-11-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 11-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 PRINTS PR00143 Citrate synthase signature 300 320 9.1E-47 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 PRINTS PR00143 Citrate synthase signature 167 180 9.1E-47 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 PRINTS PR00143 Citrate synthase signature 245 273 9.1E-47 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 PRINTS PR00143 Citrate synthase signature 364 380 9.1E-47 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 PRINTS PR00143 Citrate synthase signature 223 238 9.1E-47 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 PRINTS PR00143 Citrate synthase signature 384 398 9.1E-47 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 Pfam PF00285 Citrate synthase, C-terminal domain 47 416 4.9E-119 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 SUPERFAMILY SSF48256 7 421 4.58E-134 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 WS_RS06935 eb1a88528c4d5181d1a5d256acb26818 422 Gene3D G3DSA:1.10.230.10 285 378 1.3E-35 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 SMART SM00382 26 235 6.3E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 SMART SM00382 346 513 3.1E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 SUPERFAMILY SSF52540 304 528 1.47E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 Pfam PF00005 ABC transporter 339 468 6.8E-20 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 Pfam PF00005 ABC transporter 18 186 9.5E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 SUPERFAMILY SSF52540 7 239 1.45E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 Gene3D G3DSA:3.40.50.300 319 531 8.8E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 Pfam PF12848 ABC transporter 226 309 1.7E-19 T 11-11-2016 IPR032781 ABC-transporter extension domain WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 Gene3D G3DSA:3.40.50.300 6 101 3.5E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10430 699e3832868016d47f70c2fdcfd03ac4 533 Gene3D G3DSA:3.40.50.300 134 283 3.5E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS04875 12db27da6d3a0151db972da43386530c 267 SUPERFAMILY SSF53335 28 222 4.0E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS04875 12db27da6d3a0151db972da43386530c 267 Pfam PF13649 Methyltransferase domain 65 150 2.5E-13 T 11-11-2016 WS_RS04875 12db27da6d3a0151db972da43386530c 267 Gene3D G3DSA:3.40.50.150 35 161 2.6E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10620 2edc2522b15ea2badf350d5762fdb191 129 Gene3D G3DSA:3.10.490.10 8 72 9.9E-6 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 43.25 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 5.1E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.1E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 5.1E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 5.1E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 SUPERFAMILY SSF52540 3 304 4.76E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 9.2E-148 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 PIRSF PIRSF006641 1 366 5.8E-156 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 SUPERFAMILY SSF81271 282 366 2.4E-36 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 8.9E-41 T 11-11-2016 IPR013029 Domain of unknown function DUF933 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 Pfam PF01926 50S ribosome-binding GTPase 5 120 3.9E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 Gene3D G3DSA:3.10.20.30 270 366 1.7E-49 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 Gene3D G3DSA:3.40.50.300 203 269 1.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 Gene3D G3DSA:3.40.50.300 4 131 1.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06465 51cc5f8d33af3235af7c59174262dfe2 366 Gene3D G3DSA:1.10.150.300 132 202 8.1E-22 T 11-11-2016 IPR023192 TGS-like domain WS_RS01465 043a73d3afcfc6586007448194c0da91 199 Pfam PF00753 Metallo-beta-lactamase superfamily 11 179 7.0E-20 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS01465 043a73d3afcfc6586007448194c0da91 199 SUPERFAMILY SSF56281 6 198 4.59E-39 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS01465 043a73d3afcfc6586007448194c0da91 199 Gene3D G3DSA:3.60.15.10 6 191 1.7E-35 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS01465 043a73d3afcfc6586007448194c0da91 199 SMART SM00849 12 179 2.7E-28 T 11-11-2016 IPR001279 Metallo-beta-lactamase WS_RS01930 af825bfa12ab0b02ea4653eb46ca9460 225 SUPERFAMILY SSF52540 4 223 8.96E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01930 af825bfa12ab0b02ea4653eb46ca9460 225 Gene3D G3DSA:3.40.50.300 4 223 1.2E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01930 af825bfa12ab0b02ea4653eb46ca9460 225 Pfam PF00005 ABC transporter 24 173 1.4E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS01930 af825bfa12ab0b02ea4653eb46ca9460 225 SMART SM00382 33 222 8.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 1.8E-32 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 1.8E-32 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 139 1.8E-32 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 127 1.8E-32 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 1.8E-32 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 178 1.7E-52 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 PIRSF PIRSF001467 17 180 2.0E-61 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 Gene3D G3DSA:2.40.100.10 24 178 4.4E-70 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS07695 1bfcb2d8b44700298ef60c3c5d1f5d27 181 SUPERFAMILY SSF50891 15 178 1.61E-63 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS08500 1bfc9c88894822c1d2c5ba0b0045535d 240 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 239 4.0E-31 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 WS_RS08500 1bfc9c88894822c1d2c5ba0b0045535d 240 Gene3D G3DSA:3.40.190.10 27 83 6.7E-4 T 11-11-2016 WS_RS08500 1bfc9c88894822c1d2c5ba0b0045535d 240 SUPERFAMILY SSF53850 22 239 5.18E-39 T 11-11-2016 WS_RS08500 1bfc9c88894822c1d2c5ba0b0045535d 240 Pfam PF13531 Bacterial extracellular solute-binding protein 26 239 4.8E-22 T 11-11-2016 WS_RS08500 1bfc9c88894822c1d2c5ba0b0045535d 240 Gene3D G3DSA:3.40.190.10 97 202 8.4E-19 T 11-11-2016 WS_RS07400 cc2cfc2aacfa4fdadb2aafb1977ae00d 641 Pfam PF03239 Iron permease FTR1 family 307 509 8.4E-29 T 11-11-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 SMART SM00304 199 253 6.1E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 Pfam PF00672 HAMP domain 180 249 1.2E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 Gene3D G3DSA:1.10.287.950 283 489 5.9E-45 T 11-11-2016 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 4.3E-18 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 4.3E-18 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 512 1.6E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 SUPERFAMILY SSF58104 221 530 6.15E-57 T 11-11-2016 WS_RS09975 08d96a35c68651623821c8d803d705b5 530 SMART SM00283 268 529 1.4E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 Gene3D G3DSA:3.40.50.1980 207 304 1.3E-30 T 11-11-2016 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 Gene3D G3DSA:3.40.50.1980 40 204 3.2E-50 T 11-11-2016 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 Pfam PF01297 Zinc-uptake complex component A periplasmic 43 289 5.2E-58 T 11-11-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 PRINTS PR00691 Adhesin B signature 65 83 4.3E-8 T 11-11-2016 IPR006129 Adhesin B GO:0007155 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 PRINTS PR00691 Adhesin B signature 148 167 4.3E-8 T 11-11-2016 IPR006129 Adhesin B GO:0007155 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 PRINTS PR00691 Adhesin B signature 84 103 4.3E-8 T 11-11-2016 IPR006129 Adhesin B GO:0007155 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 PRINTS PR00691 Adhesin B signature 251 268 4.3E-8 T 11-11-2016 IPR006129 Adhesin B GO:0007155 WS_RS05030 153350b8d7dca7cb430cc099818ab364 311 SUPERFAMILY SSF53807 40 304 6.87E-78 T 11-11-2016 WS_RS02275 4a318e4dc6517a59a7fdd8b02cb38ef0 52 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 3.4E-24 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02275 4a318e4dc6517a59a7fdd8b02cb38ef0 52 Pfam PF00471 Ribosomal protein L33 3 49 1.9E-22 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02275 4a318e4dc6517a59a7fdd8b02cb38ef0 52 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.714 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02275 4a318e4dc6517a59a7fdd8b02cb38ef0 52 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-11-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS02275 4a318e4dc6517a59a7fdd8b02cb38ef0 52 SUPERFAMILY SSF57829 1 49 1.46E-18 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 Gene3D G3DSA:1.10.10.60 210 260 2.2E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 SUPERFAMILY SSF46689 201 260 1.61E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 43 56 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 Pfam PF00158 Sigma-54 interaction domain 21 62 1.5E-4 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 SUPERFAMILY SSF52540 22 165 8.36E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 Gene3D G3DSA:3.40.50.300 54 70 4.0E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 Gene3D G3DSA:3.40.50.300 177 197 4.0E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 Gene3D G3DSA:3.40.50.300 18 53 2.2E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02585 f2e80d2f643dddde405c53d9527e3e27 265 Pfam PF02954 Bacterial regulatory protein, Fis family 225 258 4.1E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PIRSF PIRSF002869 1 467 2.3E-148 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 Pfam PF03023 MviN-like protein 28 465 1.6E-111 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 432 3.7E-112 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PRINTS PR01806 Virulence factor MviN signature 260 286 3.8E-55 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PRINTS PR01806 Virulence factor MviN signature 32 51 3.8E-55 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PRINTS PR01806 Virulence factor MviN signature 358 377 3.8E-55 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PRINTS PR01806 Virulence factor MviN signature 410 427 3.8E-55 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PRINTS PR01806 Virulence factor MviN signature 124 148 3.8E-55 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PRINTS PR01806 Virulence factor MviN signature 51 67 3.8E-55 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS02165 892a09cccdbe75f1dabaf0e171749e1a 471 PRINTS PR01806 Virulence factor MviN signature 148 169 3.8E-55 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ WS_RS06785 dc60099349dd7e4908c0cbf38df69768 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 153 7.3E-24 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS06785 dc60099349dd7e4908c0cbf38df69768 704 Pfam PF00593 TonB dependent receptor 459 703 3.0E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06785 dc60099349dd7e4908c0cbf38df69768 704 Gene3D G3DSA:2.40.170.20 157 704 2.5E-85 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS06785 dc60099349dd7e4908c0cbf38df69768 704 SUPERFAMILY SSF56935 258 704 6.51E-118 T 11-11-2016 WS_RS06785 dc60099349dd7e4908c0cbf38df69768 704 SUPERFAMILY SSF56935 38 220 6.51E-118 T 11-11-2016 WS_RS06785 dc60099349dd7e4908c0cbf38df69768 704 Gene3D G3DSA:2.170.130.10 35 156 5.7E-36 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS04910 78d27778ba505471e1b42289096c49ea 95 SMART SM00411 1 91 7.3E-25 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS04910 78d27778ba505471e1b42289096c49ea 95 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.3E-21 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS04910 78d27778ba505471e1b42289096c49ea 95 Gene3D G3DSA:4.10.520.10 1 92 5.1E-23 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 WS_RS04910 78d27778ba505471e1b42289096c49ea 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.1E-8 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS04910 78d27778ba505471e1b42289096c49ea 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.1E-8 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS04910 78d27778ba505471e1b42289096c49ea 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.1E-8 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS04910 78d27778ba505471e1b42289096c49ea 95 SUPERFAMILY SSF47729 1 92 4.27E-21 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 WS_RS10690 9a1adc1fd81e73f20d796abbafc46c35 156 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 146 2.6E-18 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 WS_RS10690 9a1adc1fd81e73f20d796abbafc46c35 156 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 69 145 3.6E-19 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 WS_RS10690 9a1adc1fd81e73f20d796abbafc46c35 156 SUPERFAMILY SSF46767 67 146 2.22E-18 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 WS_RS10690 9a1adc1fd81e73f20d796abbafc46c35 156 Gene3D G3DSA:1.10.10.10 68 149 1.7E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SUPERFAMILY SSF81901 176 268 1.67E-22 T 11-11-2016 WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Pfam PF08238 Sel1 repeat 199 229 9.7E-4 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Pfam PF08238 Sel1 repeat 159 192 1.8E-6 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Pfam PF08238 Sel1 repeat 86 121 3.3E-8 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Pfam PF08238 Sel1 repeat 124 157 7.7E-5 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Pfam PF08238 Sel1 repeat 233 264 2.2E-4 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Pfam PF08238 Sel1 repeat 49 84 1.4E-7 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SMART SM00671 158 193 1.3E-9 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SMART SM00671 122 157 2.0E-8 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SMART SM00671 194 229 2.2E-6 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SMART SM00671 86 121 6.2E-9 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SMART SM00671 230 265 4.5E-7 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SMART SM00671 49 85 9.7E-8 T 11-11-2016 IPR006597 Sel1-like repeat WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 SUPERFAMILY SSF81901 22 189 8.5E-43 T 11-11-2016 WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Gene3D G3DSA:1.25.40.10 22 121 3.0E-27 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Gene3D G3DSA:1.25.40.10 122 190 6.2E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS01910 8dee1073a2f3acaf290256c334d998b3 282 Gene3D G3DSA:1.25.40.10 191 271 1.1E-21 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS01770 185eaae4b14527da3bcf118d681a85cf 180 Pfam PF04367 Protein of unknown function (DUF502) 57 149 3.5E-19 T 11-11-2016 IPR007462 Protein of unknown function DUF502 WS_RS08485 27ac8402b97c750cc1a3a5a7e9dafe29 123 SUPERFAMILY SSF53146 1 106 3.4E-6 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS08485 27ac8402b97c750cc1a3a5a7e9dafe29 123 Gene3D G3DSA:3.30.420.130 1 106 4.6E-8 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS04260 ca6e950c33ca462e92dc9fc7f29e2d52 168 Pfam PF00034 Cytochrome c 85 163 5.3E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04260 ca6e950c33ca462e92dc9fc7f29e2d52 168 Gene3D G3DSA:1.10.760.10 82 163 2.3E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04260 ca6e950c33ca462e92dc9fc7f29e2d52 168 SUPERFAMILY SSF46626 75 163 3.39E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 57 81 1.1E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 83 103 1.1E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 261 283 1.1E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 35 54 1.1E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 412 434 1.1E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 Pfam PF00361 Proton-conducting membrane transporter 132 420 4.6E-82 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 120 1.6E-25 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 608 1.3E-223 T 11-11-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 413 432 5.0E-65 T 11-11-2016 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 156 177 5.0E-65 T 11-11-2016 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 5.0E-65 T 11-11-2016 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 5.0E-65 T 11-11-2016 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 5.0E-65 T 11-11-2016 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 5.0E-65 T 11-11-2016 WS_RS02400 00e94c126cf8fe77979130938f63255f 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 5.0E-65 T 11-11-2016 WS_RS10605 a4e171e841f898f8b0657d83c26680d7 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 416 500 6.4E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10605 a4e171e841f898f8b0657d83c26680d7 562 SMART SM00283 352 558 2.8E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10605 a4e171e841f898f8b0657d83c26680d7 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 182 1.3E-23 T 11-11-2016 IPR024478 4HB MCP domain WS_RS10605 a4e171e841f898f8b0657d83c26680d7 562 SUPERFAMILY SSF58104 240 270 2.88E-50 T 11-11-2016 WS_RS10605 a4e171e841f898f8b0657d83c26680d7 562 SUPERFAMILY SSF58104 355 558 2.88E-50 T 11-11-2016 WS_RS10605 a4e171e841f898f8b0657d83c26680d7 562 Gene3D G3DSA:1.10.287.950 363 553 3.3E-45 T 11-11-2016 WS_RS06120 dfbcb6ba48df03017d4c3160e507d1fd 185 SUPERFAMILY SSF52317 6 182 5.4E-45 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS06120 dfbcb6ba48df03017d4c3160e507d1fd 185 Gene3D G3DSA:3.40.50.880 2 182 5.9E-53 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like WS_RS06120 dfbcb6ba48df03017d4c3160e507d1fd 185 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 6 178 2.8E-54 T 11-11-2016 IPR006287 Protein deglycase DJ-1 GO:0006517|GO:0030091 WS_RS06120 dfbcb6ba48df03017d4c3160e507d1fd 185 Pfam PF01965 DJ-1/PfpI family 6 165 3.8E-36 T 11-11-2016 IPR002818 DJ-1/PfpI WS_RS08865 1b37a8e87b7aea538dc7129acd7c2394 82 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 7 53 8.2E-9 T 11-11-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter WS_RS02245 fcd926cdc3e49eeb1e365a52e0cdaca9 252 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 206 1.1E-19 T 11-11-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 WS_RS02245 fcd926cdc3e49eeb1e365a52e0cdaca9 252 Gene3D G3DSA:3.40.50.150 6 209 8.8E-45 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS02245 fcd926cdc3e49eeb1e365a52e0cdaca9 252 SUPERFAMILY SSF53335 34 222 1.19E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06565 d0d6ba845851cceae7ff9c923e69c4dd 434 SMART SM00448 3 115 1.5E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06565 d0d6ba845851cceae7ff9c923e69c4dd 434 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS06565 d0d6ba845851cceae7ff9c923e69c4dd 434 Gene3D G3DSA:3.40.50.2300 2 128 5.2E-37 T 11-11-2016 WS_RS06565 d0d6ba845851cceae7ff9c923e69c4dd 434 SUPERFAMILY SSF52172 3 130 1.85E-37 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS01215 93f8e12fe487ac65d29c9ee6c8d9a7f5 224 Gene3D G3DSA:3.40.190.10 105 139 1.3E-4 T 11-11-2016 WS_RS01215 93f8e12fe487ac65d29c9ee6c8d9a7f5 224 Gene3D G3DSA:3.40.190.10 1 73 4.1E-24 T 11-11-2016 WS_RS01215 93f8e12fe487ac65d29c9ee6c8d9a7f5 224 Gene3D G3DSA:3.40.190.10 140 216 4.1E-24 T 11-11-2016 WS_RS01215 93f8e12fe487ac65d29c9ee6c8d9a7f5 224 SUPERFAMILY SSF53850 1 218 5.16E-48 T 11-11-2016 WS_RS01215 93f8e12fe487ac65d29c9ee6c8d9a7f5 224 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 219 21.89 T 11-11-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 WS_RS01215 93f8e12fe487ac65d29c9ee6c8d9a7f5 224 Pfam PF02621 Menaquinone biosynthesis 105 213 4.3E-13 T 11-11-2016 IPR003773 Menaquinone biosynthesis enzyme WS_RS03855 c5aa5e2970f6c4d91bb7022dabe8127d 210 Gene3D G3DSA:3.30.420.40 66 207 4.8E-37 T 11-11-2016 WS_RS03855 c5aa5e2970f6c4d91bb7022dabe8127d 210 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 206 15.38 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 WS_RS03855 c5aa5e2970f6c4d91bb7022dabe8127d 210 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 200 3.5E-27 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 WS_RS03855 c5aa5e2970f6c4d91bb7022dabe8127d 210 Gene3D G3DSA:3.30.420.40 1 59 3.2E-21 T 11-11-2016 WS_RS03855 c5aa5e2970f6c4d91bb7022dabe8127d 210 SUPERFAMILY SSF53067 1 82 6.04E-27 T 11-11-2016 WS_RS03855 c5aa5e2970f6c4d91bb7022dabe8127d 210 SUPERFAMILY SSF53067 85 206 5.18E-27 T 11-11-2016 WS_RS03855 c5aa5e2970f6c4d91bb7022dabe8127d 210 Pfam PF03309 Type III pantothenate kinase 31 165 1.5E-16 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 WS_RS06065 51d04e9ff3834f9b87d6c8292e761f07 400 SUPERFAMILY SSF103473 6 392 4.97E-46 T 11-11-2016 IPR020846 Major facilitator superfamily domain WS_RS06065 51d04e9ff3834f9b87d6c8292e761f07 400 Gene3D G3DSA:1.20.1250.20 211 393 1.3E-12 T 11-11-2016 WS_RS06065 51d04e9ff3834f9b87d6c8292e761f07 400 Pfam PF07690 Major Facilitator Superfamily 11 294 1.1E-20 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 WS_RS06065 51d04e9ff3834f9b87d6c8292e761f07 400 Gene3D G3DSA:1.20.1250.20 6 197 6.5E-27 T 11-11-2016 WS_RS01145 b01bfdf9af387451f9be6aac66d3d883 432 Gene3D G3DSA:3.40.630.10 29 245 4.7E-11 T 11-11-2016 WS_RS01145 b01bfdf9af387451f9be6aac66d3d883 432 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 335 430 1.2E-24 T 11-11-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain WS_RS01145 b01bfdf9af387451f9be6aac66d3d883 432 SUPERFAMILY SSF53187 196 267 9.26E-22 T 11-11-2016 WS_RS01145 b01bfdf9af387451f9be6aac66d3d883 432 SUPERFAMILY SSF53187 26 163 9.26E-22 T 11-11-2016 WS_RS01145 b01bfdf9af387451f9be6aac66d3d883 432 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 7 262 3.1E-98 T 11-11-2016 IPR031489 D,L-carboxypeptidase, peptidase domain WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 2.2E-36 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 2.2E-36 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 2.2E-36 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 2.2E-36 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 2.2E-36 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 2.2E-36 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 2.2E-36 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 SUPERFAMILY SSF118215 11 402 3.92E-106 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 Pfam PF00375 Sodium:dicarboxylate symporter family 13 401 5.5E-115 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS03495 b147ca91a09af6baa7bf58134da57fc1 410 Gene3D G3DSA:1.10.3860.10 8 406 3.8E-111 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS08625 65a412ab71edbb563e3b969853f40c73 117 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 2 93 4.0E-4 T 11-11-2016 IPR010005 Formate hydrogenlyase maturation HycH WS_RS08625 65a412ab71edbb563e3b969853f40c73 117 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 2 93 3.5E-10 T 11-11-2016 IPR010005 Formate hydrogenlyase maturation HycH WS_RS09500 a5a1dc7e56cb2c6fc2bcd059505eb9c4 344 SUPERFAMILY SSF53597 184 339 8.18E-24 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 WS_RS09500 a5a1dc7e56cb2c6fc2bcd059505eb9c4 344 Gene3D G3DSA:3.40.140.10 10 176 2.2E-26 T 11-11-2016 WS_RS09500 a5a1dc7e56cb2c6fc2bcd059505eb9c4 344 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 14 250 3.8E-64 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 WS_RS09500 a5a1dc7e56cb2c6fc2bcd059505eb9c4 344 Gene3D G3DSA:3.40.430.10 184 339 3.2E-18 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 WS_RS09500 a5a1dc7e56cb2c6fc2bcd059505eb9c4 344 Pfam PF01872 RibD C-terminal domain 199 308 1.7E-4 T 11-11-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 WS_RS09500 a5a1dc7e56cb2c6fc2bcd059505eb9c4 344 SUPERFAMILY SSF53927 10 178 3.41E-36 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 WS_RS09500 a5a1dc7e56cb2c6fc2bcd059505eb9c4 344 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 134 1.3E-16 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 WS_RS05505 110cfd1604f8351ebd1edcfbb196fb9b 286 Gene3D G3DSA:3.10.20.10 32 114 1.2E-18 T 11-11-2016 WS_RS05505 110cfd1604f8351ebd1edcfbb196fb9b 286 Pfam PF02634 FdhD/NarQ family 30 262 4.0E-73 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS05505 110cfd1604f8351ebd1edcfbb196fb9b 286 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 5 263 30.763 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS05505 110cfd1604f8351ebd1edcfbb196fb9b 286 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 26 262 1.0E-56 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS05505 110cfd1604f8351ebd1edcfbb196fb9b 286 PIRSF PIRSF015626 1 267 1.5E-90 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS05505 110cfd1604f8351ebd1edcfbb196fb9b 286 Gene3D G3DSA:3.40.140.10 128 264 4.2E-47 T 11-11-2016 WS_RS05505 110cfd1604f8351ebd1edcfbb196fb9b 286 SUPERFAMILY SSF53927 19 262 1.29E-69 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 WS_RS03340 e3dae6ccd9c49f6c263c899e7de99f1e 318 Gene3D G3DSA:3.60.120.10 63 313 9.2E-64 T 11-11-2016 IPR005801 ADC synthase GO:0009058 WS_RS03340 e3dae6ccd9c49f6c263c899e7de99f1e 318 PRINTS PR00095 Anthranilate synthase component I signature 171 184 8.3E-7 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS03340 e3dae6ccd9c49f6c263c899e7de99f1e 318 PRINTS PR00095 Anthranilate synthase component I signature 157 170 8.3E-7 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS03340 e3dae6ccd9c49f6c263c899e7de99f1e 318 PRINTS PR00095 Anthranilate synthase component I signature 254 268 8.3E-7 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS03340 e3dae6ccd9c49f6c263c899e7de99f1e 318 Pfam PF00425 chorismate binding enzyme 70 312 1.6E-57 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal WS_RS03340 e3dae6ccd9c49f6c263c899e7de99f1e 318 SUPERFAMILY SSF56322 49 314 6.54E-61 T 11-11-2016 IPR005801 ADC synthase GO:0009058 WS_RS09080 b6dd4ef0089d6c5239c428711afb2f11 253 SUPERFAMILY SSF53098 85 244 6.96E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS09080 b6dd4ef0089d6c5239c428711afb2f11 253 Pfam PF00665 Integrase core domain 90 200 6.4E-24 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 WS_RS09080 b6dd4ef0089d6c5239c428711afb2f11 253 Gene3D G3DSA:3.30.420.10 84 238 9.1E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS08985 af91392ec46caf2a3adcc46fd27644ed 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 260 34.501 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 WS_RS08985 af91392ec46caf2a3adcc46fd27644ed 264 SUPERFAMILY SSF51366 10 258 5.77E-85 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 WS_RS08985 af91392ec46caf2a3adcc46fd27644ed 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 11-11-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 WS_RS08985 af91392ec46caf2a3adcc46fd27644ed 264 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 37 256 30.242 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 WS_RS08985 af91392ec46caf2a3adcc46fd27644ed 264 Gene3D G3DSA:3.20.20.70 1 257 6.4E-99 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS08985 af91392ec46caf2a3adcc46fd27644ed 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 255 1.5E-88 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 WS_RS09985 0ed878b0b32c51a73f81f56dc70c0a9f 374 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 39 202 3.1E-42 T 11-11-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 WS_RS01245 c01a3126ba9430f4541c942a1b1ba9c1 246 Gene3D G3DSA:3.40.50.1110 77 222 5.7E-6 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 Pfam PF00691 OmpA family 236 330 3.6E-24 T 11-11-2016 IPR006665 OmpA-like domain WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 SUPERFAMILY SSF56925 28 155 1.02E-12 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 SUPERFAMILY SSF103088 224 338 1.03E-35 T 11-11-2016 IPR006665 OmpA-like domain WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 Gene3D G3DSA:2.40.160.20 37 166 7.8E-13 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 Pfam PF05736 OprF membrane domain 5 170 3.1E-7 T 11-11-2016 IPR008722 Outer membrane porin F, N-terminal WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 Gene3D G3DSA:4.10.1080.10 198 224 5.8E-5 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 SUPERFAMILY SSF103647 197 227 1.15E-6 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 PRINTS PR01021 OMPA domain signature 266 281 1.3E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 PRINTS PR01021 OMPA domain signature 236 258 1.3E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 PRINTS PR01021 OMPA domain signature 281 297 1.3E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 299 318 7.4E-6 T 11-11-2016 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 319 339 7.4E-6 T 11-11-2016 WS_RS01035 e66470e87613dbfe610f46e21f1d1307 341 Gene3D G3DSA:3.30.1330.60 225 336 6.1E-38 T 11-11-2016 IPR006665 OmpA-like domain WS_RS09195 4962791d3f902655b9f7ac23c9bea93f 118 SUPERFAMILY SSF58104 1 112 1.05E-19 T 11-11-2016 WS_RS09195 4962791d3f902655b9f7ac23c9bea93f 118 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 1 110 1.6E-20 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09195 4962791d3f902655b9f7ac23c9bea93f 118 Gene3D G3DSA:1.10.287.950 1 82 1.4E-14 T 11-11-2016 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 SUPERFAMILY SSF52418 58 318 3.4E-85 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 Gene3D G3DSA:1.20.970.10 136 169 7.4E-25 T 11-11-2016 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 Gene3D G3DSA:1.20.970.10 4 46 7.4E-25 T 11-11-2016 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 Pfam PF00591 Glycosyl transferase family, a/b domain 58 309 4.0E-82 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 4 319 29.993 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 318 4.6E-100 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 Gene3D G3DSA:3.40.1030.10 59 135 1.8E-78 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 WS_RS09890 24853fbc77f49cf106653c89e863e550 323 Gene3D G3DSA:3.40.1030.10 170 322 1.8E-78 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 WS_RS00540 8df39c44695642b5dd6bc7ac45bd60af 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 203 2.5E-31 T 11-11-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal WS_RS00540 8df39c44695642b5dd6bc7ac45bd60af 333 SUPERFAMILY SSF46689 283 330 7.62E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS00540 8df39c44695642b5dd6bc7ac45bd60af 333 SMART SM00342 246 328 5.4E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS00540 8df39c44695642b5dd6bc7ac45bd60af 333 Gene3D G3DSA:1.10.10.60 285 331 1.3E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS00540 8df39c44695642b5dd6bc7ac45bd60af 333 Pfam PF12833 Helix-turn-helix domain 252 329 1.4E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 WS_RS00540 8df39c44695642b5dd6bc7ac45bd60af 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 5.8E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS00540 8df39c44695642b5dd6bc7ac45bd60af 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 5.8E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 WS_RS02360 bbbab99c6f5b55213055bcbb00e6794d 77 Pfam PF16514 putative NADH-ubiquinone oxidoreductase chain E 1 74 2.7E-40 T 11-11-2016 IPR032424 Putative NADH-ubiquinone oxidoreductase chain E WS_RS00640 f4c67da02644de17987b2d6d8159bee2 403 Gene3D G3DSA:3.30.70.260 324 387 2.1E-5 T 11-11-2016 WS_RS00640 f4c67da02644de17987b2d6d8159bee2 403 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 400 2.9E-161 T 11-11-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 WS_RS00640 f4c67da02644de17987b2d6d8159bee2 403 Gene3D G3DSA:3.40.50.1100 69 323 2.1E-76 T 11-11-2016 WS_RS00640 f4c67da02644de17987b2d6d8159bee2 403 SUPERFAMILY SSF53686 4 353 8.38E-100 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS00640 f4c67da02644de17987b2d6d8159bee2 403 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 WS_RS00640 f4c67da02644de17987b2d6d8159bee2 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 304 2.0E-82 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme WS_RS06445 3af53872b17c1f3dba24aa41cdda41ba 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 12 182 35.659 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 WS_RS06445 3af53872b17c1f3dba24aa41cdda41ba 182 Pfam PF00156 Phosphoribosyl transferase domain 36 162 3.1E-18 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 WS_RS06445 3af53872b17c1f3dba24aa41cdda41ba 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 13 181 4.0E-67 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 WS_RS06445 3af53872b17c1f3dba24aa41cdda41ba 182 SUPERFAMILY SSF53271 15 174 5.51E-46 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS06445 3af53872b17c1f3dba24aa41cdda41ba 182 Gene3D G3DSA:3.40.50.2020 7 181 5.9E-63 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS03810 5cbaf8477c66da24c255bc3f300a5814 558 Pfam PF13604 AAA domain 139 325 8.7E-9 T 11-11-2016 WS_RS03810 5cbaf8477c66da24c255bc3f300a5814 558 Pfam PF13087 AAA domain 404 528 5.2E-11 T 11-11-2016 WS_RS03810 5cbaf8477c66da24c255bc3f300a5814 558 Gene3D G3DSA:3.40.50.300 475 532 3.4E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03810 5cbaf8477c66da24c255bc3f300a5814 558 Gene3D G3DSA:3.40.50.300 265 326 1.2E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03810 5cbaf8477c66da24c255bc3f300a5814 558 Gene3D G3DSA:3.40.50.300 360 398 1.2E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03810 5cbaf8477c66da24c255bc3f300a5814 558 Gene3D G3DSA:3.40.50.300 118 227 1.2E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03810 5cbaf8477c66da24c255bc3f300a5814 558 SUPERFAMILY SSF52540 131 536 7.23E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09755 e022be76187909cc50be0a42d0e078aa 164 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 153 2.6E-50 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 WS_RS09755 e022be76187909cc50be0a42d0e078aa 164 PIRSF PIRSF006118 1 164 2.1E-59 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 WS_RS09755 e022be76187909cc50be0a42d0e078aa 164 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 116 1.6E-12 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 WS_RS09755 e022be76187909cc50be0a42d0e078aa 164 Pfam PF08282 haloacid dehalogenase-like hydrolase 77 141 2.7E-9 T 11-11-2016 IPR023214 HAD-like domain WS_RS09755 e022be76187909cc50be0a42d0e078aa 164 SUPERFAMILY SSF56784 2 156 1.38E-37 T 11-11-2016 IPR023214 HAD-like domain WS_RS09755 e022be76187909cc50be0a42d0e078aa 164 Gene3D G3DSA:3.40.50.1000 2 159 2.2E-40 T 11-11-2016 IPR023214 HAD-like domain WS_RS08075 7da9e55caa0c5f25daf1794ea7b4dac2 93 SUPERFAMILY SSF54189 7 89 1.58E-20 T 11-11-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08075 7da9e55caa0c5f25daf1794ea7b4dac2 93 Gene3D G3DSA:3.30.70.330 7 90 7.2E-20 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 WS_RS08075 7da9e55caa0c5f25daf1794ea7b4dac2 93 Pfam PF00276 Ribosomal protein L23 7 89 1.5E-16 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 WS_RS08075 7da9e55caa0c5f25daf1794ea7b4dac2 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 13.47 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 Gene3D G3DSA:3.40.50.2300 1 120 2.5E-33 T 11-11-2016 WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 Gene3D G3DSA:1.20.120.160 140 238 9.1E-10 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 SMART SM00448 1 112 7.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 SUPERFAMILY SSF47226 136 217 1.96E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 SUPERFAMILY SSF47226 95 108 1.96E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 Pfam PF01627 Hpt domain 180 217 1.1E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 SUPERFAMILY SSF52172 1 120 6.83E-32 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS01060 9bd4a8dd5b70f62e2a40f6b841e159fd 242 Pfam PF00072 Response regulator receiver domain 1 111 4.6E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS02915 6e5f71b6f4934f8176f2ed3f514e4dfe 203 SMART SM00479 30 203 7.3E-33 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III WS_RS02915 6e5f71b6f4934f8176f2ed3f514e4dfe 203 SUPERFAMILY SSF53098 25 200 6.28E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS02915 6e5f71b6f4934f8176f2ed3f514e4dfe 203 Gene3D G3DSA:3.30.420.10 28 201 2.1E-35 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS02915 6e5f71b6f4934f8176f2ed3f514e4dfe 203 Pfam PF00929 Exonuclease 32 194 1.3E-22 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III WS_RS03440 d65327a8baf066b5026c35a3ba29b343 117 Gene3D G3DSA:3.90.10.10 21 93 5.6E-7 T 11-11-2016 WS_RS03440 d65327a8baf066b5026c35a3ba29b343 117 SUPERFAMILY SSF48695 19 100 4.94E-10 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS05620 b8d59245fcc6ef32316a7bfde3fd284c 186 Gene3D G3DSA:4.10.1020.10 80 150 6.4E-24 T 11-11-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain WS_RS05620 b8d59245fcc6ef32316a7bfde3fd284c 186 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 34 163 6.2E-36 T 11-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB WS_RS05620 b8d59245fcc6ef32316a7bfde3fd284c 186 SUPERFAMILY SSF48695 47 173 5.24E-33 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS01945 282de907ca7341959fb5ede2b6deb29b 130 Pfam PF13899 Thioredoxin-like 24 100 5.1E-8 T 11-11-2016 WS_RS01945 282de907ca7341959fb5ede2b6deb29b 130 SUPERFAMILY SSF52833 4 127 2.88E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS01945 282de907ca7341959fb5ede2b6deb29b 130 Gene3D G3DSA:3.40.30.10 23 126 7.2E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS04110 602a74da014eab5de0e998384bb9b45a 112 Pfam PF13411 MerR HTH family regulatory protein 12 76 6.9E-9 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 WS_RS04110 602a74da014eab5de0e998384bb9b45a 112 Gene3D G3DSA:1.10.1660.10 14 101 3.9E-10 T 11-11-2016 WS_RS04110 602a74da014eab5de0e998384bb9b45a 112 SUPERFAMILY SSF46955 13 100 3.66E-10 T 11-11-2016 IPR009061 Putative DNA-binding domain WS_RS00835 15f1b09d088a4fc21eee30d903b3aef5 397 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 388 4.9E-39 T 11-11-2016 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 WS_RS00835 15f1b09d088a4fc21eee30d903b3aef5 397 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 137 1.8E-33 T 11-11-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 WS_RS00835 15f1b09d088a4fc21eee30d903b3aef5 397 Gene3D G3DSA:3.40.50.720 2 192 3.1E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00835 15f1b09d088a4fc21eee30d903b3aef5 397 SUPERFAMILY SSF51735 2 191 3.73E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS02005 219311416f5193a79da95bb33e8795ca 514 SUPERFAMILY SSF56112 81 141 4.68E-22 T 11-11-2016 IPR011009 Protein kinase-like domain WS_RS02005 219311416f5193a79da95bb33e8795ca 514 SUPERFAMILY SSF56112 176 293 4.68E-22 T 11-11-2016 IPR011009 Protein kinase-like domain WS_RS02005 219311416f5193a79da95bb33e8795ca 514 Gene3D G3DSA:3.90.1200.10 242 291 1.7E-6 T 11-11-2016 WS_RS02005 219311416f5193a79da95bb33e8795ca 514 Gene3D G3DSA:3.30.200.20 111 144 8.8E-4 T 11-11-2016 WS_RS02005 219311416f5193a79da95bb33e8795ca 514 Pfam PF03109 ABC1 family 103 202 6.7E-22 T 11-11-2016 IPR004147 UbiB domain WS_RS07020 a19ace5bae0f79316e53a7a2741d04be 153 Pfam PF00588 SpoU rRNA Methylase family 3 143 6.6E-35 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 WS_RS07020 a19ace5bae0f79316e53a7a2741d04be 153 SUPERFAMILY SSF75217 3 150 9.81E-39 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases WS_RS07020 a19ace5bae0f79316e53a7a2741d04be 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 152 31.317 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 WS_RS07020 a19ace5bae0f79316e53a7a2741d04be 153 Gene3D G3DSA:3.40.1280.10 2 149 1.3E-55 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal WS_RS07020 a19ace5bae0f79316e53a7a2741d04be 153 PIRSF PIRSF029256 2 152 5.0E-55 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 SUPERFAMILY SSF51658 4 281 2.23E-95 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 70 78 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 Gene3D G3DSA:3.20.20.150 3 281 3.1E-117 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 Hamap MF_00152 Probable endonuclease 4 [nfo]. 3 280 40.865 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 SMART SM00518 4 280 9.6E-114 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 216 232 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 277 9.9E-100 T 11-11-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 Pfam PF01261 Xylose isomerase-like TIM barrel 22 240 8.0E-43 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain WS_RS08255 6fa898416fc72f80b972992d668b86d2 282 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 176 183 - T 11-11-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 WS_RS01965 a9f249f23b362f799f71cc7cbd56640b 223 Pfam PF00899 ThiF family 10 159 2.4E-36 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS01965 a9f249f23b362f799f71cc7cbd56640b 223 SUPERFAMILY SSF69572 5 219 1.57E-47 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 WS_RS01965 a9f249f23b362f799f71cc7cbd56640b 223 Gene3D G3DSA:3.40.50.720 5 217 9.2E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS08900 beb8129e35bfd0c0edb3660a022c412c 422 Gene3D G3DSA:3.90.1150.10 287 421 3.2E-47 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS08900 beb8129e35bfd0c0edb3660a022c412c 422 SUPERFAMILY SSF53383 1 421 1.33E-108 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS08900 beb8129e35bfd0c0edb3660a022c412c 422 PIRSF PIRSF001434 1 422 4.0E-124 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 WS_RS08900 beb8129e35bfd0c0edb3660a022c412c 422 Gene3D G3DSA:3.40.640.10 1 285 6.8E-104 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS08900 beb8129e35bfd0c0edb3660a022c412c 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 2.4E-131 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 WS_RS08900 beb8129e35bfd0c0edb3660a022c412c 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.1E-169 T 11-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 WS_RS05940 aeb84a235f8a05392d39a9621495df44 308 SUPERFAMILY SSF51261 26 265 1.36E-60 T 11-11-2016 IPR011055 Duplicated hybrid motif WS_RS05940 aeb84a235f8a05392d39a9621495df44 308 Gene3D G3DSA:2.70.70.10 132 266 6.7E-49 T 11-11-2016 WS_RS05940 aeb84a235f8a05392d39a9621495df44 308 Pfam PF01551 Peptidase family M23 165 261 1.3E-34 T 11-11-2016 IPR016047 Peptidase M23 WS_RS07240 5de762d256867766a242dce33315db70 97 Gene3D G3DSA:1.20.120.50 10 82 9.9E-5 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 WS_RS07240 5de762d256867766a242dce33315db70 97 SUPERFAMILY SSF47188 11 83 2.09E-5 T 11-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 WS_RS10205 cea0f926f8bf76eb0a50b1f5548bb848 269 Gene3D G3DSA:3.40.50.300 14 143 6.9E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10205 cea0f926f8bf76eb0a50b1f5548bb848 269 Pfam PF13401 AAA domain 43 162 3.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS10205 cea0f926f8bf76eb0a50b1f5548bb848 269 SUPERFAMILY SSF52540 29 242 4.99E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05130 663c68d9cd3708fcd6502cc810b2fea9 374 SUPERFAMILY SSF52922 266 374 9.68E-25 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS05130 663c68d9cd3708fcd6502cc810b2fea9 374 Gene3D G3DSA:3.40.50.970 3 189 1.0E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS05130 663c68d9cd3708fcd6502cc810b2fea9 374 SUPERFAMILY SSF52518 4 258 5.4E-68 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS05130 663c68d9cd3708fcd6502cc810b2fea9 374 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 275 367 1.7E-25 T 11-11-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II WS_RS05130 663c68d9cd3708fcd6502cc810b2fea9 374 Gene3D G3DSA:3.40.50.920 267 374 1.6E-24 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 WS_RS05130 663c68d9cd3708fcd6502cc810b2fea9 374 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 243 4.5E-68 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 WS_RS04385 395edb8e168c2d20f741f20bc99cb905 392 Gene3D G3DSA:2.130.10.10 94 392 2.3E-55 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS04385 395edb8e168c2d20f741f20bc99cb905 392 SUPERFAMILY SSF50974 49 367 2.49E-53 T 11-11-2016 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 WS_RS08575 f09f502390b56e35b44ce58b8f558ed6 345 Pfam PF01594 Domain of unknown function DUF20 6 336 2.4E-51 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like WS_RS09520 3ead73dbf96c123022e51de33019b4b8 366 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 108 362 4.3E-83 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria WS_RS09520 3ead73dbf96c123022e51de33019b4b8 366 SUPERFAMILY SSF56266 171 272 7.85E-9 T 11-11-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 WS_RS09520 3ead73dbf96c123022e51de33019b4b8 366 Pfam PF02405 Permease MlaE 150 359 2.5E-70 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 WS_RS09520 3ead73dbf96c123022e51de33019b4b8 366 SUPERFAMILY SSF52091 9 88 3.34E-6 T 11-11-2016 IPR002645 STAS domain WS_RS09520 3ead73dbf96c123022e51de33019b4b8 366 Gene3D G3DSA:3.30.750.24 6 88 3.3E-4 T 11-11-2016 IPR002645 STAS domain WS_RS03205 1ea1eea657854f8134b90af637c3711b 226 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 33 204 4.3E-49 T 11-11-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG WS_RS03205 1ea1eea657854f8134b90af637c3711b 226 Pfam PF03641 Possible lysine decarboxylase 75 203 8.0E-35 T 11-11-2016 IPR031100 LOG family WS_RS03205 1ea1eea657854f8134b90af637c3711b 226 Gene3D G3DSA:3.40.50.450 13 208 3.4E-66 T 11-11-2016 WS_RS03205 1ea1eea657854f8134b90af637c3711b 226 SUPERFAMILY SSF102405 12 206 2.44E-64 T 11-11-2016 WS_RS08455 ce7da93ede6ebca7ad3da98fc0b46409 189 Pfam PF09335 SNARE associated Golgi protein 30 144 6.7E-11 T 11-11-2016 IPR032816 SNARE associated Golgi protein WS_RS06480 ec9bb4fc8b69fbc62d96ca4e9b029c3a 145 SUPERFAMILY SSF53927 2 142 9.72E-39 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 WS_RS06480 ec9bb4fc8b69fbc62d96ca4e9b029c3a 145 Gene3D G3DSA:3.40.140.10 2 138 3.5E-37 T 11-11-2016 WS_RS06480 ec9bb4fc8b69fbc62d96ca4e9b029c3a 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 2.1E-21 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 WS_RS02785 9cad57a0d43781344e6ad2084642a84f 358 Gene3D G3DSA:1.10.3720.10 122 348 2.7E-13 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS02785 9cad57a0d43781344e6ad2084642a84f 358 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 145 352 2.6E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS02785 9cad57a0d43781344e6ad2084642a84f 358 SUPERFAMILY SSF161098 123 336 3.27E-13 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS07270 39b35a9af1aaae9d7468dfdedeba1f4a 334 Gene3D G3DSA:3.30.2010.10 160 238 5.4E-12 T 11-11-2016 WS_RS07270 39b35a9af1aaae9d7468dfdedeba1f4a 334 Pfam PF01435 Peptidase family M48 160 327 3.2E-25 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 WS_RS10260 a248c4760576c6e06895a5e771372389 253 Pfam PF12804 MobA-like NTP transferase domain 3 122 3.7E-11 T 11-11-2016 IPR025877 MobA-like NTP transferase WS_RS10260 a248c4760576c6e06895a5e771372389 253 SUPERFAMILY SSF53448 1 246 8.34E-39 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS10260 a248c4760576c6e06895a5e771372389 253 Gene3D G3DSA:3.90.550.10 1 246 2.0E-34 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS08955 43c98be31b207f0666cbca84d6770e92 369 Gene3D G3DSA:3.40.50.2000 167 351 1.8E-38 T 11-11-2016 WS_RS08955 43c98be31b207f0666cbca84d6770e92 369 SUPERFAMILY SSF53756 1 352 1.11E-65 T 11-11-2016 WS_RS08955 43c98be31b207f0666cbca84d6770e92 369 Gene3D G3DSA:3.40.50.2000 1 154 3.5E-32 T 11-11-2016 WS_RS08955 43c98be31b207f0666cbca84d6770e92 369 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 292 9.9E-28 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 WS_RS08955 43c98be31b207f0666cbca84d6770e92 369 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 2 291 2.2E-54 T 11-11-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative WS_RS06360 44fa1e0aecb7f63bbaccea0ba7401575 246 Pfam PF04402 Protein of unknown function (DUF541) 66 242 1.8E-7 T 11-11-2016 IPR007497 Protein of unknown function DUF541 WS_RS10245 708aaed19d55ff88288ddbc5189f99f6 151 Pfam PF00156 Phosphoribosyl transferase domain 15 145 2.4E-19 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 WS_RS10245 708aaed19d55ff88288ddbc5189f99f6 151 Gene3D G3DSA:3.40.50.2020 2 143 2.8E-27 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS10245 708aaed19d55ff88288ddbc5189f99f6 151 SUPERFAMILY SSF53271 2 136 2.13E-25 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like WS_RS04090 b7c7736b65ab6ee15bc94a72e7ad5efe 224 Gene3D G3DSA:3.40.50.2300 6 155 4.1E-25 T 11-11-2016 WS_RS04090 b7c7736b65ab6ee15bc94a72e7ad5efe 224 SMART SM00448 7 118 4.1E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04090 b7c7736b65ab6ee15bc94a72e7ad5efe 224 Pfam PF00072 Response regulator receiver domain 10 117 6.4E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS04090 b7c7736b65ab6ee15bc94a72e7ad5efe 224 SMART SM00862 152 222 3.2E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04090 b7c7736b65ab6ee15bc94a72e7ad5efe 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 222 8.2E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 WS_RS04090 b7c7736b65ab6ee15bc94a72e7ad5efe 224 Gene3D G3DSA:1.10.10.10 156 223 5.6E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04090 b7c7736b65ab6ee15bc94a72e7ad5efe 224 SUPERFAMILY SSF52172 6 185 2.85E-27 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 Gene3D G3DSA:1.20.58.180 206 283 1.9E-29 T 11-11-2016 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 4.3E-68 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 4.3E-68 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 4.3E-68 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 4.3E-68 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 4.3E-68 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 4.3E-68 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 SUPERFAMILY SSF55681 3 280 4.72E-125 T 11-11-2016 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 Gene3D G3DSA:3.30.930.10 1 204 2.1E-99 T 11-11-2016 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 288 5.7E-157 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 280 4.4E-143 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS09995 0c034f99332b4beb19c78790c236b1d7 293 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 282 58.001 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 WS_RS10735 061a15595cbd0efc73dc78a593cbb4c4 200 Gene3D G3DSA:3.30.420.130 92 199 8.7E-9 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS10735 061a15595cbd0efc73dc78a593cbb4c4 200 SUPERFAMILY SSF53146 95 199 6.54E-9 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS10735 061a15595cbd0efc73dc78a593cbb4c4 200 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 108 199 8.0E-6 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS10735 061a15595cbd0efc73dc78a593cbb4c4 200 Pfam PF02001 Protein of unknown function DUF134 16 86 2.3E-10 T 11-11-2016 IPR002852 Uncharacterised protein family UPF0251 WS_RS10735 061a15595cbd0efc73dc78a593cbb4c4 200 Gene3D G3DSA:1.10.10.10 31 73 4.0E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS10735 061a15595cbd0efc73dc78a593cbb4c4 200 SUPERFAMILY SSF88659 31 73 8.5E-5 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.1E-22 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 2.1E-22 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.1E-22 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 2.1E-22 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 117 2.1E-22 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 157 4.5E-40 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 Gene3D G3DSA:2.40.100.10 11 156 5.8E-48 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS01800 b4d10ac11f868095f8474821165f1c77 167 SUPERFAMILY SSF50891 22 157 1.02E-46 T 11-11-2016 IPR029000 Cyclophilin-like domain WS_RS00445 2249ee11d4699dee5514f3e3507b0447 283 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 278 4.1E-86 T 11-11-2016 IPR010099 Epimerase family protein SDR39U1 WS_RS00445 2249ee11d4699dee5514f3e3507b0447 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 201 1.1E-14 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 WS_RS00445 2249ee11d4699dee5514f3e3507b0447 283 SUPERFAMILY SSF51735 1 282 1.16E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00445 2249ee11d4699dee5514f3e3507b0447 283 Pfam PF08338 Domain of unknown function (DUF1731) 235 281 1.5E-18 T 11-11-2016 IPR013549 Domain of unknown function DUF1731 WS_RS00445 2249ee11d4699dee5514f3e3507b0447 283 Gene3D G3DSA:3.40.50.720 1 226 1.6E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 Gene3D G3DSA:1.20.120.220 70 219 2.6E-40 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 222 14.653 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 ProSitePatterns PS00449 ATP synthase a subunit signature. 161 170 - T 11-11-2016 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 SUPERFAMILY SSF81336 70 215 9.02E-36 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 Pfam PF00119 ATP synthase A chain 23 215 1.1E-49 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 20 217 4.7E-41 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 PRINTS PR00123 ATP synthase A subunit signature 138 153 1.9E-12 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 PRINTS PR00123 ATP synthase A subunit signature 202 217 1.9E-12 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 PRINTS PR00123 ATP synthase A subunit signature 158 180 1.9E-12 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01565 72bdb092c61c85fd1c473124aec3a2ad 227 PRINTS PR00123 ATP synthase A subunit signature 78 94 1.9E-12 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 WS_RS01635 cb3f21e2586b0af24b4fd7818cd7b0bd 62 Pfam PF00830 Ribosomal L28 family 3 60 7.3E-22 T 11-11-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS01635 cb3f21e2586b0af24b4fd7818cd7b0bd 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 19.299 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS01635 cb3f21e2586b0af24b4fd7818cd7b0bd 62 Gene3D G3DSA:2.30.170.40 2 60 2.0E-23 T 11-11-2016 WS_RS01635 cb3f21e2586b0af24b4fd7818cd7b0bd 62 SUPERFAMILY SSF143800 1 61 8.44E-25 T 11-11-2016 WS_RS01635 cb3f21e2586b0af24b4fd7818cd7b0bd 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.9E-23 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS04440 605f8b4856329401b15c316fafb5b69d 275 Pfam PF12679 ABC-2 family transporter protein 7 274 7.1E-23 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 WS_RS08120 b5584a7646f457a8e916856dce0f5a30 379 Pfam PF00534 Glycosyl transferases group 1 204 353 1.3E-29 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 WS_RS08120 b5584a7646f457a8e916856dce0f5a30 379 Pfam PF13439 Glycosyltransferase Family 4 14 185 1.1E-21 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS08120 b5584a7646f457a8e916856dce0f5a30 379 Gene3D G3DSA:3.40.50.2000 166 353 8.6E-26 T 11-11-2016 WS_RS08120 b5584a7646f457a8e916856dce0f5a30 379 SUPERFAMILY SSF53756 2 374 2.15E-67 T 11-11-2016 WS_RS00495 78c7a768459f2d2e7455b602bc5a48bf 301 Pfam PF02541 Ppx/GppA phosphatase family 28 296 7.5E-32 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 WS_RS00495 78c7a768459f2d2e7455b602bc5a48bf 301 Gene3D G3DSA:3.30.420.150 122 296 4.3E-26 T 11-11-2016 WS_RS00495 78c7a768459f2d2e7455b602bc5a48bf 301 SUPERFAMILY SSF53067 4 113 1.13E-19 T 11-11-2016 WS_RS00495 78c7a768459f2d2e7455b602bc5a48bf 301 SUPERFAMILY SSF53067 123 296 9.07E-22 T 11-11-2016 WS_RS00495 78c7a768459f2d2e7455b602bc5a48bf 301 Gene3D G3DSA:3.30.420.40 4 113 7.8E-23 T 11-11-2016 WS_RS03775 eba764f5b9cbc816cce3ad8e8b3e331b 261 Gene3D G3DSA:3.40.1190.20 2 256 6.7E-76 T 11-11-2016 IPR029056 Ribokinase-like WS_RS03775 eba764f5b9cbc816cce3ad8e8b3e331b 261 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 1.0E-74 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 WS_RS03775 eba764f5b9cbc816cce3ad8e8b3e331b 261 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 256 4.2E-68 T 11-11-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 WS_RS03775 eba764f5b9cbc816cce3ad8e8b3e331b 261 SUPERFAMILY SSF53613 2 257 2.62E-58 T 11-11-2016 IPR029056 Ribokinase-like WS_RS02525 42dc96102f23c344a80040785977dd28 176 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 157 1.2E-24 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 WS_RS02525 42dc96102f23c344a80040785977dd28 176 PRINTS PR00125 ATP synthase delta subunit signature 71 82 1.9E-7 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 WS_RS02525 42dc96102f23c344a80040785977dd28 176 PRINTS PR00125 ATP synthase delta subunit signature 82 96 1.9E-7 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 WS_RS02525 42dc96102f23c344a80040785977dd28 176 PRINTS PR00125 ATP synthase delta subunit signature 5 24 1.9E-7 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 WS_RS02525 42dc96102f23c344a80040785977dd28 176 Gene3D G3DSA:1.10.520.20 5 102 3.3E-17 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 WS_RS02525 42dc96102f23c344a80040785977dd28 176 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 138 4.8E-17 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 WS_RS02525 42dc96102f23c344a80040785977dd28 176 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 174 12.693 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 WS_RS02525 42dc96102f23c344a80040785977dd28 176 SUPERFAMILY SSF47928 4 102 9.29E-19 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 WS_RS02980 4e0d6acdd37e8905f7b8b952944369fd 319 Pfam PF13144 Chaperone for flagella basal body P-ring formation 128 315 1.2E-24 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal WS_RS02980 4e0d6acdd37e8905f7b8b952944369fd 319 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 185 318 5.6E-29 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal WS_RS04740 4cc368aefd4a6a00b155f594fb4ff1d5 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 308 9.4E-42 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04740 4cc368aefd4a6a00b155f594fb4ff1d5 312 Gene3D G3DSA:1.10.3720.10 92 305 1.8E-22 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04740 4cc368aefd4a6a00b155f594fb4ff1d5 312 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 311 9.2E-162 T 11-11-2016 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 WS_RS04740 4cc368aefd4a6a00b155f594fb4ff1d5 312 SUPERFAMILY SSF161098 94 291 3.66E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS00020 e6d2ff231e9382f3fb6f02efa05c38d3 124 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 124 43.62 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 WS_RS00020 e6d2ff231e9382f3fb6f02efa05c38d3 124 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 14 123 2.2E-37 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 WS_RS00020 e6d2ff231e9382f3fb6f02efa05c38d3 124 Pfam PF14489 QueF-like protein 46 123 6.1E-27 T 11-11-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 WS_RS00020 e6d2ff231e9382f3fb6f02efa05c38d3 124 SUPERFAMILY SSF55620 12 115 1.93E-28 T 11-11-2016 WS_RS00020 e6d2ff231e9382f3fb6f02efa05c38d3 124 PIRSF PIRSF027377 1 124 4.3E-48 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 WS_RS00020 e6d2ff231e9382f3fb6f02efa05c38d3 124 Gene3D G3DSA:3.30.1130.10 12 123 4.3E-34 T 11-11-2016 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 151 174 - T 11-11-2016 IPR025505 FHIPEP conserved site WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 745 5.0E-280 T 11-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 165 183 1.2E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 42 55 1.2E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 246 260 1.2E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 146 162 1.2E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 195 212 1.2E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 79 98 1.2E-54 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 Pfam PF00771 FHIPEP family 35 736 3.7E-256 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS05060 9ce7e99a2d37830f31fb0b05b1aef9af 749 PIRSF PIRSF005419 8 749 6.6E-233 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 WS_RS04060 ca8bc109d0a572574a91655080e48f38 131 Pfam PF01957 NfeD-like C-terminal, partner-binding 4 130 3.2E-9 T 11-11-2016 IPR002810 NfeD-like, C-terminal domain WS_RS04060 ca8bc109d0a572574a91655080e48f38 131 Gene3D G3DSA:2.40.50.140 84 129 3.2E-5 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS03360 ab4f509e50177e22bc897132e4a4e837 330 Pfam PF00072 Response regulator receiver domain 12 120 4.6E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03360 ab4f509e50177e22bc897132e4a4e837 330 SUPERFAMILY SSF52172 9 144 6.4E-36 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS03360 ab4f509e50177e22bc897132e4a4e837 330 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 219 328 1.0E-7 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 WS_RS03360 ab4f509e50177e22bc897132e4a4e837 330 SMART SM00448 9 120 2.5E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03360 ab4f509e50177e22bc897132e4a4e837 330 Gene3D G3DSA:3.40.50.2300 9 145 1.6E-33 T 11-11-2016 WS_RS08440 bccf072f1345bc3c4b1eb9bdb0b88274 263 SMART SM00388 158 220 1.8E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08440 bccf072f1345bc3c4b1eb9bdb0b88274 263 SUPERFAMILY SSF47384 144 219 8.44E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS08440 bccf072f1345bc3c4b1eb9bdb0b88274 263 Gene3D G3DSA:1.10.287.130 150 212 1.4E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01850 28759c100b051747e1cfaf101f31bd9c 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 315 1.1E-63 T 11-11-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 WS_RS01850 28759c100b051747e1cfaf101f31bd9c 352 PIRSF PIRSF039026 1 352 2.8E-135 T 11-11-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 SUPERFAMILY SSF101801 206 287 2.09E-20 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 Gene3D G3DSA:2.30.330.10 199 288 5.7E-29 T 11-11-2016 WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 205 280 2.0E-27 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 SUPERFAMILY SSF103039 2 165 1.57E-15 T 11-11-2016 IPR028976 CheC-like domain WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 209 277 2.5E-19 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 Gene3D G3DSA:3.40.1550.10 23 171 1.9E-12 T 11-11-2016 IPR028976 CheC-like domain WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 PRINTS PR00956 Flagellar motor switch protein FliN signature 254 269 1.7E-19 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 PRINTS PR00956 Flagellar motor switch protein FliN signature 225 241 1.7E-19 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 PRINTS PR00956 Flagellar motor switch protein FliN signature 208 224 1.7E-19 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS07710 f5b7209c507824835ef4cef7384c3bf2 289 PRINTS PR00956 Flagellar motor switch protein FliN signature 241 254 1.7E-19 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 WS_RS01980 e64443b82156ef1d938566057e93f846 443 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 1.6E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS01980 e64443b82156ef1d938566057e93f846 443 PRINTS PR00173 Glutamate-aspartate symporter signature 60 80 1.6E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS01980 e64443b82156ef1d938566057e93f846 443 PRINTS PR00173 Glutamate-aspartate symporter signature 90 115 1.6E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS01980 e64443b82156ef1d938566057e93f846 443 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 1.6E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS01980 e64443b82156ef1d938566057e93f846 443 PRINTS PR00173 Glutamate-aspartate symporter signature 19 39 1.6E-23 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS01980 e64443b82156ef1d938566057e93f846 443 Pfam PF00375 Sodium:dicarboxylate symporter family 25 420 1.2E-95 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS01980 e64443b82156ef1d938566057e93f846 443 Gene3D G3DSA:1.10.3860.10 21 426 9.5E-92 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS01980 e64443b82156ef1d938566057e93f846 443 SUPERFAMILY SSF118215 25 421 4.05E-93 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 437 1.1E-163 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 PRINTS PR00175 Sodium/alanine symporter signature 406 426 1.9E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 PRINTS PR00175 Sodium/alanine symporter signature 180 198 1.9E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.9E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 PRINTS PR00175 Sodium/alanine symporter signature 208 227 1.9E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.9E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 PRINTS PR00175 Sodium/alanine symporter signature 347 369 1.9E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS06230 1521f924151b7d15cab684561eac0e22 442 Pfam PF01235 Sodium:alanine symporter family 51 440 1.2E-142 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 WS_RS08705 7f40fa5bca6cc7ae80b33767b94276fe 375 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 358 2.2E-73 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 WS_RS08705 7f40fa5bca6cc7ae80b33767b94276fe 375 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 367 1.9E-37 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 WS_RS03690 df713a6c3191e7cb7bacc1f47ddbe0d5 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.4E-15 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS03690 df713a6c3191e7cb7bacc1f47ddbe0d5 212 SUPERFAMILY SSF46689 8 79 1.18E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03690 df713a6c3191e7cb7bacc1f47ddbe0d5 212 Gene3D G3DSA:1.10.10.60 9 59 2.7E-20 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS03690 df713a6c3191e7cb7bacc1f47ddbe0d5 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.4E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS03690 df713a6c3191e7cb7bacc1f47ddbe0d5 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.4E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS03690 df713a6c3191e7cb7bacc1f47ddbe0d5 212 Gene3D G3DSA:1.10.357.10 60 210 6.1E-34 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 WS_RS03690 df713a6c3191e7cb7bacc1f47ddbe0d5 212 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 152 204 3.7E-7 T 11-11-2016 WS_RS08465 1afd5e7547944c3fb98258cd40dda775 263 SUPERFAMILY SSF117143 92 222 9.81E-38 T 11-11-2016 WS_RS08465 1afd5e7547944c3fb98258cd40dda775 263 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 3.2E-120 T 11-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 WS_RS08465 1afd5e7547944c3fb98258cd40dda775 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.8E-49 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G WS_RS08465 1afd5e7547944c3fb98258cd40dda775 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 6.0E-31 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G WS_RS08465 1afd5e7547944c3fb98258cd40dda775 263 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site WS_RS08465 1afd5e7547944c3fb98258cd40dda775 263 Pfam PF00460 Flagella basal body rod protein 5 35 3.0E-11 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 WS_RS08465 1afd5e7547944c3fb98258cd40dda775 263 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.0E-25 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain WS_RS04155 da5a118f9836487c8ed345d6a41e4038 74 SUPERFAMILY SSF57868 44 71 7.77E-6 T 11-11-2016 IPR017854 Metallothionein domain GO:0046872 WS_RS04155 da5a118f9836487c8ed345d6a41e4038 74 Gene3D G3DSA:2.30.170.10 44 71 3.0E-6 T 11-11-2016 WS_RS04155 da5a118f9836487c8ed345d6a41e4038 74 Pfam PF02069 Prokaryotic metallothionein 44 71 2.3E-6 T 11-11-2016 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 WS_RS03910 3c2fba553923f2f7ec608dfa7cb54a3b 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 142 3.5E-31 T 11-11-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 8.0E-88 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 8.0E-88 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 PRINTS PR00758 Arsenical pump membrane protein signature 392 416 8.0E-88 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 PRINTS PR00758 Arsenical pump membrane protein signature 359 384 8.0E-88 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 8.0E-88 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 8.0E-88 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 8.0E-88 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 416 9.8E-170 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS03615 8467a5c05eed1e33288b693f18d7f7b9 417 Pfam PF02040 Arsenical pump membrane protein 3 416 2.1E-138 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 PIRSF PIRSF000904 1 280 9.6E-91 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 Gene3D G3DSA:3.30.540.10 2 141 1.3E-31 T 11-11-2016 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 Gene3D G3DSA:3.40.190.80 153 278 1.7E-41 T 11-11-2016 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 38 53 3.1E-14 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 250 274 3.1E-14 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 187 207 3.1E-14 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 108 126 3.1E-14 T 11-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 279 30.201 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 30 146 8.6E-28 T 11-11-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 PIRSF PIRSF500210 1 280 1.9E-89 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 WS_RS01090 513b4a5f661907c5a9e63a7fcddb2e15 280 SUPERFAMILY SSF56655 1 277 7.18E-68 T 11-11-2016 WS_RS02410 f23361b05729c8b5cb16e75d22508139 496 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 484 15.89 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 WS_RS02410 f23361b05729c8b5cb16e75d22508139 496 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 16 478 3.4E-123 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 WS_RS02410 f23361b05729c8b5cb16e75d22508139 496 Pfam PF00361 Proton-conducting membrane transporter 129 428 3.0E-60 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS10130 c9478fc02b75f355306c62d963c9d3b9 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 5 198 26.778 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 WS_RS10130 c9478fc02b75f355306c62d963c9d3b9 201 Gene3D G3DSA:3.40.50.300 3 197 5.5E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10130 c9478fc02b75f355306c62d963c9d3b9 201 SUPERFAMILY SSF52540 7 194 1.03E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10130 c9478fc02b75f355306c62d963c9d3b9 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 8 189 8.4E-52 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 WS_RS10130 c9478fc02b75f355306c62d963c9d3b9 201 Pfam PF01121 Dephospho-CoA kinase 7 182 1.0E-45 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 WS_RS04820 32b2fc80deb2be67b5c664e9fb2a4d9e 667 Pfam PF08376 Nitrate and nitrite sensing 60 297 2.3E-51 T 11-11-2016 IPR013587 Nitrate/nitrite sensing protein WS_RS04820 32b2fc80deb2be67b5c664e9fb2a4d9e 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 665 4.1E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04820 32b2fc80deb2be67b5c664e9fb2a4d9e 667 SUPERFAMILY SSF58104 358 667 1.57E-61 T 11-11-2016 WS_RS04820 32b2fc80deb2be67b5c664e9fb2a4d9e 667 Gene3D G3DSA:1.10.287.950 432 622 3.9E-43 T 11-11-2016 WS_RS04820 32b2fc80deb2be67b5c664e9fb2a4d9e 667 SMART SM00283 408 666 9.0E-44 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04820 32b2fc80deb2be67b5c664e9fb2a4d9e 667 Pfam PF00672 HAMP domain 318 387 4.0E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS00365 b085b116c61d1b372d732e209289d925 158 Pfam PF06518 Protein of unknown function (DUF1104) 22 113 3.0E-31 T 11-11-2016 IPR009488 Protein of unknown function DUF1104 WS_RS05015 65866222ab9d45440bd6674be45a7cb9 106 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 1.6E-30 T 11-11-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 WS_RS05015 65866222ab9d45440bd6674be45a7cb9 106 SUPERFAMILY SSF54913 3 104 5.19E-33 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta WS_RS05015 65866222ab9d45440bd6674be45a7cb9 106 Gene3D G3DSA:3.30.70.830 2 104 3.8E-34 T 11-11-2016 WS_RS00950 d31d6cef918c37b9a9df44ef821b9569 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 2.9E-22 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 WS_RS00950 d31d6cef918c37b9a9df44ef821b9569 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 21.958 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 WS_RS00950 d31d6cef918c37b9a9df44ef821b9569 80 Pfam PF02416 mttA/Hcf106 family 5 58 1.9E-21 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 WS_RS07000 ff361cce800568a9d1cd55dc3851929d 258 Gene3D G3DSA:3.40.50.300 3 249 7.0E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07000 ff361cce800568a9d1cd55dc3851929d 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 251 5.6E-6 T 11-11-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal WS_RS07000 ff361cce800568a9d1cd55dc3851929d 258 SUPERFAMILY SSF52540 3 251 5.33E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07000 ff361cce800568a9d1cd55dc3851929d 258 Pfam PF00005 ABC transporter 20 179 1.8E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS07000 ff361cce800568a9d1cd55dc3851929d 258 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS07000 ff361cce800568a9d1cd55dc3851929d 258 SMART SM00382 28 228 6.5E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS09405 3a11fbd6b923221daabae065adadad90 367 Gene3D G3DSA:3.40.640.10 46 265 1.8E-55 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS09405 3a11fbd6b923221daabae065adadad90 367 Gene3D G3DSA:3.90.1150.10 266 365 4.0E-14 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS09405 3a11fbd6b923221daabae065adadad90 367 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 WS_RS09405 3a11fbd6b923221daabae065adadad90 367 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 362 6.3E-101 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 WS_RS09405 3a11fbd6b923221daabae065adadad90 367 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 364 52.611 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 WS_RS09405 3a11fbd6b923221daabae065adadad90 367 SUPERFAMILY SSF53383 1 365 3.42E-67 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS09405 3a11fbd6b923221daabae065adadad90 367 Pfam PF00155 Aminotransferase class I and II 32 352 5.0E-45 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 WS_RS01205 4a3a9db25467806e6591fb2a20eb4255 397 SMART SM00646 235 390 1.0E-42 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 WS_RS01205 4a3a9db25467806e6591fb2a20eb4255 397 SUPERFAMILY SSF53187 312 393 4.08E-50 T 11-11-2016 WS_RS01205 4a3a9db25467806e6591fb2a20eb4255 397 SUPERFAMILY SSF53187 173 272 4.08E-50 T 11-11-2016 WS_RS01205 4a3a9db25467806e6591fb2a20eb4255 397 Gene3D G3DSA:3.40.630.40 173 273 5.9E-56 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 WS_RS01205 4a3a9db25467806e6591fb2a20eb4255 397 Gene3D G3DSA:3.40.630.40 313 394 5.9E-56 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 WS_RS01205 4a3a9db25467806e6591fb2a20eb4255 397 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 176 390 1.0E-46 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 WS_RS10250 4815a73a9834e69a9fa65c9f213e3934 430 Pfam PF00860 Permease family 18 389 1.6E-35 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS10250 4815a73a9834e69a9fa65c9f213e3934 430 PIRSF PIRSF005353 1 430 1.6E-146 T 11-11-2016 IPR026033 Purine permease PbuG-like WS_RS00700 2f8466186587240b1464533847ed5ae8 418 Pfam PF09861 Domain of unknown function (DUF2088) 7 206 4.4E-68 T 11-11-2016 IPR018657 Domain of unknown function DUF2088 WS_RS00700 2f8466186587240b1464533847ed5ae8 418 Gene3D G3DSA:3.40.50.150 265 318 4.3E-4 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06270 89297a4f478316465ad3da9be72a95af 276 Pfam PF02401 LytB protein 3 271 2.5E-86 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 WS_RS06270 89297a4f478316465ad3da9be72a95af 276 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 275 31.351 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 WS_RS06270 89297a4f478316465ad3da9be72a95af 276 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 272 4.1E-88 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 WS_RS06245 d38d2776e454395e78fa0593e719278a 713 Pfam PF00400 WD domain, G-beta repeat 93 126 0.037 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS06245 d38d2776e454395e78fa0593e719278a 713 SMART SM00320 131 170 0.21 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS06245 d38d2776e454395e78fa0593e719278a 713 SMART SM00320 89 128 0.015 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS06245 d38d2776e454395e78fa0593e719278a 713 SMART SM00320 173 211 110.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS06245 d38d2776e454395e78fa0593e719278a 713 Gene3D G3DSA:2.130.10.10 42 295 1.3E-30 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS06245 d38d2776e454395e78fa0593e719278a 713 SUPERFAMILY SSF50978 80 297 4.88E-31 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 WS_RS08045 8ed7bdbbd97604bed938b70a665f519d 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.086 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08045 8ed7bdbbd97604bed938b70a665f519d 62 Gene3D G3DSA:1.10.287.310 1 61 5.4E-20 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08045 8ed7bdbbd97604bed938b70a665f519d 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 8.7E-17 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08045 8ed7bdbbd97604bed938b70a665f519d 62 SUPERFAMILY SSF46561 1 61 5.89E-16 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08045 8ed7bdbbd97604bed938b70a665f519d 62 Pfam PF00831 Ribosomal L29 protein 5 59 1.3E-16 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08045 8ed7bdbbd97604bed938b70a665f519d 62 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-11-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS01735 94dfed561a20586bc8d2695e0dd84aef 275 Gene3D G3DSA:3.40.50.720 1 173 6.8E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01735 94dfed561a20586bc8d2695e0dd84aef 275 Pfam PF02153 Prephenate dehydrogenase 16 266 2.0E-75 T 11-11-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 WS_RS01735 94dfed561a20586bc8d2695e0dd84aef 275 SUPERFAMILY SSF51735 3 163 5.34E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01735 94dfed561a20586bc8d2695e0dd84aef 275 SUPERFAMILY SSF48179 168 274 4.53E-32 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 WS_RS07200 c8fd85a27f63c170912a24eeaf319fe5 470 Pfam PF02080 TrkA-C domain 146 212 1.2E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS07200 c8fd85a27f63c170912a24eeaf319fe5 470 SUPERFAMILY SSF116726 144 212 3.79E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS07200 c8fd85a27f63c170912a24eeaf319fe5 470 Gene3D G3DSA:3.30.70.1450 149 213 1.5E-6 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS00075 0db87207dff54529d3f0fc89cd735e08 128 Gene3D G3DSA:3.10.580.10 1 124 3.5E-28 T 11-11-2016 WS_RS00075 0db87207dff54529d3f0fc89cd735e08 128 SMART SM00116 10 59 5.2E-5 T 11-11-2016 IPR000644 CBS domain WS_RS00075 0db87207dff54529d3f0fc89cd735e08 128 SMART SM00116 77 124 2.0E-8 T 11-11-2016 IPR000644 CBS domain WS_RS00075 0db87207dff54529d3f0fc89cd735e08 128 Pfam PF00571 CBS domain 3 59 1.2E-9 T 11-11-2016 IPR000644 CBS domain WS_RS00075 0db87207dff54529d3f0fc89cd735e08 128 Pfam PF00571 CBS domain 72 124 4.9E-9 T 11-11-2016 IPR000644 CBS domain WS_RS00075 0db87207dff54529d3f0fc89cd735e08 128 SUPERFAMILY SSF54631 1 125 8.72E-27 T 11-11-2016 WS_RS00345 1118fc190e006ec907c79f5124b71383 220 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 180 3.8E-30 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase WS_RS00345 1118fc190e006ec907c79f5124b71383 220 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 22 180 8.9E-16 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase WS_RS00345 1118fc190e006ec907c79f5124b71383 220 Gene3D G3DSA:3.40.50.10420 7 192 8.6E-33 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain WS_RS00345 1118fc190e006ec907c79f5124b71383 220 SUPERFAMILY SSF100950 7 195 4.33E-35 T 11-11-2016 WS_RS00345 1118fc190e006ec907c79f5124b71383 220 PIRSF PIRSF006806 3 184 9.0E-22 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase WS_RS06620 9a4896af2669fd835f303d5db9788538 140 SUPERFAMILY SSF53146 17 133 1.26E-32 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS06620 9a4896af2669fd835f303d5db9788538 140 Gene3D G3DSA:3.30.420.130 17 133 3.8E-39 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS06620 9a4896af2669fd835f303d5db9788538 140 TIGRFAM TIGR02663 nifX: nitrogen fixation protein NifX 18 134 4.9E-51 T 11-11-2016 IPR013480 Nitrogen fixation protein NifX GO:0009399|GO:0051188|GO:0051540 WS_RS06620 9a4896af2669fd835f303d5db9788538 140 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 27 119 3.0E-21 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 Gene3D G3DSA:1.10.710.10 290 334 8.5E-14 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 Gene3D G3DSA:1.10.710.10 135 179 8.5E-14 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 Gene3D G3DSA:3.90.10.10 335 427 3.5E-9 T 11-11-2016 WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 Gene3D G3DSA:3.90.10.10 476 489 3.5E-9 T 11-11-2016 WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 Gene3D G3DSA:3.90.10.10 457 475 2.0E-6 T 11-11-2016 WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 Gene3D G3DSA:3.90.10.10 528 588 2.0E-6 T 11-11-2016 WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 Hamap MF_02023 Dissimilatory sulfite reductase. 2 690 52.097 T 11-11-2016 IPR032897 Dissimilatory sulfite reductase GO:0016002|GO:0020037|GO:0070814 WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 SUPERFAMILY SSF48695 555 687 1.56E-48 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 SUPERFAMILY SSF48695 299 521 1.56E-48 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS01880 c6ec72a8d7f35d05ff75564cecbe5ad2 690 SUPERFAMILY SSF48695 136 243 1.56E-48 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS09370 d4b46decb9d9b5dfff361e10e907a269 94 Pfam PF12838 4Fe-4S dicluster domain 9 62 4.7E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS09370 d4b46decb9d9b5dfff361e10e907a269 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS09370 d4b46decb9d9b5dfff361e10e907a269 94 SUPERFAMILY SSF54862 5 68 7.45E-15 T 11-11-2016 WS_RS09370 d4b46decb9d9b5dfff361e10e907a269 94 Gene3D G3DSA:3.30.70.20 5 69 6.3E-13 T 11-11-2016 WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 109 179 7.0E-6 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 Gene3D G3DSA:3.40.50.720 104 254 4.6E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 263 28.233 T 11-11-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 253 7.6E-69 T 11-11-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 SUPERFAMILY SSF51735 99 256 2.12E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 SUPERFAMILY SSF53223 2 98 7.48E-28 T 11-11-2016 WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 Gene3D G3DSA:3.40.192.10 1 103 5.6E-34 T 11-11-2016 WS_RS10215 339ba650c55e98276770b947fc9e3f1a 263 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 85 3.2E-22 T 11-11-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 WS_RS05550 5c2acd2096004905b65d1e9d5a66a24c 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 262 1.9E-11 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS05550 5c2acd2096004905b65d1e9d5a66a24c 267 Gene3D G3DSA:1.10.3720.10 54 260 2.0E-8 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS05550 5c2acd2096004905b65d1e9d5a66a24c 267 SUPERFAMILY SSF161098 60 241 5.07E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS02460 6df4d942c75f817e6138d96c6390087d 91 Gene3D G3DSA:4.10.520.10 1 91 4.9E-28 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 WS_RS02460 6df4d942c75f817e6138d96c6390087d 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 4.9E-25 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS02460 6df4d942c75f817e6138d96c6390087d 91 SUPERFAMILY SSF47729 1 90 5.0E-25 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 WS_RS02460 6df4d942c75f817e6138d96c6390087d 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.7E-7 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS02460 6df4d942c75f817e6138d96c6390087d 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-7 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS02460 6df4d942c75f817e6138d96c6390087d 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-7 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS02460 6df4d942c75f817e6138d96c6390087d 91 SMART SM00411 1 90 2.0E-33 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 WS_RS03595 991f93f1e9bcf31fce8500a0ceb98258 317 SUPERFAMILY SSF53850 23 316 4.71E-77 T 11-11-2016 WS_RS03595 991f93f1e9bcf31fce8500a0ceb98258 317 Pfam PF16868 NMT1-like family 27 314 5.9E-96 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family WS_RS03595 991f93f1e9bcf31fce8500a0ceb98258 317 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 314 2.9E-117 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family WS_RS03595 991f93f1e9bcf31fce8500a0ceb98258 317 Gene3D G3DSA:3.40.190.10 247 315 3.2E-57 T 11-11-2016 WS_RS03595 991f93f1e9bcf31fce8500a0ceb98258 317 Gene3D G3DSA:3.40.190.10 23 105 3.2E-57 T 11-11-2016 WS_RS03595 991f93f1e9bcf31fce8500a0ceb98258 317 Gene3D G3DSA:3.40.190.10 113 246 8.5E-33 T 11-11-2016 WS_RS02090 536a1ddfcd1b768ad18d49288b6c0a4f 232 SUPERFAMILY SSF51351 2 231 2.88E-64 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS02090 536a1ddfcd1b768ad18d49288b6c0a4f 232 Pfam PF00121 Triosephosphate isomerase 2 229 3.2E-60 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS02090 536a1ddfcd1b768ad18d49288b6c0a4f 232 ProSitePatterns PS00171 Triosephosphate isomerase active site. 157 167 - T 11-11-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS02090 536a1ddfcd1b768ad18d49288b6c0a4f 232 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 232 31.072 T 11-11-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 WS_RS02090 536a1ddfcd1b768ad18d49288b6c0a4f 232 Gene3D G3DSA:3.20.20.70 2 231 1.7E-64 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 ProSitePatterns PS00018 EF-hand calcium-binding domain. 142 154 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 Gene3D G3DSA:1.10.238.10 98 156 3.4E-11 T 11-11-2016 IPR011992 EF-hand domain pair WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 SUPERFAMILY SSF47473 29 157 1.93E-21 T 11-11-2016 IPR011992 EF-hand domain pair WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 ProSitePatterns PS00018 EF-hand calcium-binding domain. 89 101 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 SMART SM00054 133 161 2.6 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 SMART SM00054 35 63 0.01 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 SMART SM00054 80 108 3.5 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 ProSitePatterns PS00018 EF-hand calcium-binding domain. 44 56 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 Pfam PF13499 EF-hand domain pair 83 155 2.4E-10 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 Pfam PF13202 EF hand 38 59 1.3E-5 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 WS_RS07230 356cc62b9ecaec355d12755f2e956534 219 Gene3D G3DSA:1.10.238.10 30 97 2.6E-12 T 11-11-2016 IPR011992 EF-hand domain pair WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 ProSitePatterns PS00380 Rhodanese signature 1. 29 40 - T 11-11-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 310 3.3E-96 T 11-11-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 SUPERFAMILY SSF52540 142 278 7.62E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 Gene3D G3DSA:3.40.50.300 128 178 9.4E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 SUPERFAMILY SSF52821 18 131 3.8E-23 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 Gene3D G3DSA:3.40.250.10 19 127 5.8E-28 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 Pfam PF00581 Rhodanese-like domain 18 128 9.8E-11 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS09420 40416b7d32dd02a567ca1d42c8c5798b 338 SMART SM00450 1 132 7.1E-16 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03140 44e2f700abed9ef045f624fdd596c2cc 522 SUPERFAMILY SSF53649 226 507 3.74E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 WS_RS03140 44e2f700abed9ef045f624fdd596c2cc 522 Pfam PF08019 Domain of unknown function (DUF1705) 54 200 1.6E-42 T 11-11-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 WS_RS03140 44e2f700abed9ef045f624fdd596c2cc 522 Pfam PF00884 Sulfatase 229 506 2.5E-43 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 WS_RS03140 44e2f700abed9ef045f624fdd596c2cc 522 Gene3D G3DSA:3.40.720.10 231 508 9.5E-11 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 WS_RS04545 3542347f3275f19a6410a63cc2cc16ca 401 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 96 392 1.2E-87 T 11-11-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 WS_RS04545 3542347f3275f19a6410a63cc2cc16ca 401 Pfam PF12501 Phosphate ATP-binding cassette transporter 2 46 1.0E-9 T 11-11-2016 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 WS_RS04545 3542347f3275f19a6410a63cc2cc16ca 401 SUPERFAMILY SSF161098 154 384 1.57E-31 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04545 3542347f3275f19a6410a63cc2cc16ca 401 Gene3D G3DSA:1.10.3720.10 75 85 5.5E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04545 3542347f3275f19a6410a63cc2cc16ca 401 Gene3D G3DSA:1.10.3720.10 148 397 5.5E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04545 3542347f3275f19a6410a63cc2cc16ca 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 187 396 2.3E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS09155 28aad58cfc7bf7e45def5637881aa924 203 Pfam PF03458 UPF0126 domain 6 77 1.2E-18 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 WS_RS09155 28aad58cfc7bf7e45def5637881aa924 203 Pfam PF03458 UPF0126 domain 94 165 4.0E-21 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 37 52 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 120 138 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 81 100 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 22 37 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 182 200 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 56 71 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 103 120 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 244 256 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 PRINTS PR01010 Flagellar P-ring protein signature 156 174 9.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 Pfam PF02119 Flagellar P-ring protein 22 348 3.7E-118 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS07520 da8e55bf317b7c1a2f8c41f0defcd864 349 Hamap MF_00416 Flagellar P-ring protein [flgI]. 7 349 35.537 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 WS_RS06010 99e5cfc1b2a8267b13d6eb98be88193d 172 SUPERFAMILY SSF89392 16 172 9.81E-30 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX WS_RS06010 99e5cfc1b2a8267b13d6eb98be88193d 172 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 21 93 4.6E-10 T 11-11-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like WS_RS06010 99e5cfc1b2a8267b13d6eb98be88193d 172 Gene3D G3DSA:2.50.20.10 17 172 4.5E-21 T 11-11-2016 WS_RS06010 99e5cfc1b2a8267b13d6eb98be88193d 172 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 1 172 21.602 T 11-11-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 WS_RS04665 04909123e204da3cfe14bb84ac4b9f3d 507 Gene3D G3DSA:1.20.140.10 329 454 2.6E-44 T 11-11-2016 WS_RS04665 04909123e204da3cfe14bb84ac4b9f3d 507 Pfam PF02335 Cytochrome c552 51 483 2.6E-179 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 WS_RS04665 04909123e204da3cfe14bb84ac4b9f3d 507 PIRSF PIRSF000243 1 491 1.6E-182 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 WS_RS04665 04909123e204da3cfe14bb84ac4b9f3d 507 SUPERFAMILY SSF48695 50 504 1.14E-159 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS04665 04909123e204da3cfe14bb84ac4b9f3d 507 Hamap MF_01182 Cytochrome c-552 [nrfA]. 2 488 53.351 T 11-11-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 WS_RS04665 04909123e204da3cfe14bb84ac4b9f3d 507 Gene3D G3DSA:1.10.780.10 127 218 4.4E-16 T 11-11-2016 WS_RS04665 04909123e204da3cfe14bb84ac4b9f3d 507 Gene3D G3DSA:1.10.780.10 256 328 4.4E-16 T 11-11-2016 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 SUPERFAMILY SSF53187 3 168 3.02E-39 T 11-11-2016 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 SUPERFAMILY SSF53187 342 425 3.02E-39 T 11-11-2016 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 Pfam PF01546 Peptidase family M20/M25/M40 59 422 1.3E-8 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 PRINTS PR00934 X-His dipeptidase (M25) signature 80 98 2.9E-17 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 PRINTS PR00934 X-His dipeptidase (M25) signature 375 391 2.9E-17 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 PRINTS PR00934 X-His dipeptidase (M25) signature 397 419 2.9E-17 T 11-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 Gene3D G3DSA:3.40.630.10 345 424 2.4E-59 T 11-11-2016 WS_RS07165 050fda6ce20371e5fb611cabdbfdaa4e 429 Gene3D G3DSA:3.40.630.10 6 155 2.4E-59 T 11-11-2016 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 SMART SM00283 314 523 3.4E-34 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 Gene3D G3DSA:1.10.287.950 331 519 3.4E-46 T 11-11-2016 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 457 3.1E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 432 3.3E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 3.3E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 193 3.3E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 SUPERFAMILY SSF58104 208 237 2.49E-54 T 11-11-2016 WS_RS09205 c899704145f9d45747d3cb235cb25bd9 527 SUPERFAMILY SSF58104 313 525 2.49E-54 T 11-11-2016 WS_RS09930 b007b52598f2985aae66cce6dcc27f53 238 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 236 25.737 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 WS_RS09930 b007b52598f2985aae66cce6dcc27f53 238 Pfam PF02107 Flagellar L-ring protein 49 237 2.3E-53 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 WS_RS09930 b007b52598f2985aae66cce6dcc27f53 238 PRINTS PR01008 Flagellar L-ring protein signature 152 167 7.1E-15 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 WS_RS09930 b007b52598f2985aae66cce6dcc27f53 238 PRINTS PR01008 Flagellar L-ring protein signature 69 81 7.1E-15 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 WS_RS09930 b007b52598f2985aae66cce6dcc27f53 238 PRINTS PR01008 Flagellar L-ring protein signature 215 229 7.1E-15 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 WS_RS09930 b007b52598f2985aae66cce6dcc27f53 238 PRINTS PR01008 Flagellar L-ring protein signature 178 194 7.1E-15 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 WS_RS09930 b007b52598f2985aae66cce6dcc27f53 238 PRINTS PR01008 Flagellar L-ring protein signature 199 213 7.1E-15 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 WS_RS02720 abb7b88d5a1217d8b2a3cce0b65b097b 140 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 28 121 1.4E-27 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 WS_RS02720 abb7b88d5a1217d8b2a3cce0b65b097b 140 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 99 109 - T 11-11-2016 IPR020549 Endoribonuclease YbeY, conserved site WS_RS02720 abb7b88d5a1217d8b2a3cce0b65b097b 140 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 11 131 21.097 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 WS_RS02720 abb7b88d5a1217d8b2a3cce0b65b097b 140 Gene3D G3DSA:3.40.390.30 26 138 5.8E-38 T 11-11-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 WS_RS02720 abb7b88d5a1217d8b2a3cce0b65b097b 140 SUPERFAMILY SSF55486 3 135 4.94E-33 T 11-11-2016 WS_RS02720 abb7b88d5a1217d8b2a3cce0b65b097b 140 Pfam PF02130 Uncharacterized protein family UPF0054 18 122 4.5E-33 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 WS_RS04340 b6b698af6414abdec214f87c30f035ac 208 SUPERFAMILY SSF46689 4 85 1.03E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS04340 b6b698af6414abdec214f87c30f035ac 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.3E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS04340 b6b698af6414abdec214f87c30f035ac 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.3E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS04340 b6b698af6414abdec214f87c30f035ac 208 Gene3D G3DSA:1.10.357.10 6 193 4.3E-27 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 WS_RS04340 b6b698af6414abdec214f87c30f035ac 208 SUPERFAMILY SSF48498 81 188 7.41E-6 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal WS_RS04340 b6b698af6414abdec214f87c30f035ac 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 2.0E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 WS_RS06940 952b53b696c7665a02617ccdb6e88f8d 430 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 37 424 2.7E-107 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS06940 952b53b696c7665a02617ccdb6e88f8d 430 Gene3D G3DSA:3.40.718.10 23 430 1.6E-154 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS06940 952b53b696c7665a02617ccdb6e88f8d 430 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 14 430 1.2E-219 T 11-11-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 WS_RS06940 952b53b696c7665a02617ccdb6e88f8d 430 SUPERFAMILY SSF53659 22 430 1.92E-135 T 11-11-2016 WS_RS06940 952b53b696c7665a02617ccdb6e88f8d 430 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 317 336 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 WS_RS06940 952b53b696c7665a02617ccdb6e88f8d 430 SMART SM01329 36 426 3.9E-159 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS00520 e216053f1c81fa3a13c2fefd617e8ce6 250 Gene3D G3DSA:3.40.50.300 1 238 2.6E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00520 e216053f1c81fa3a13c2fefd617e8ce6 250 SMART SM00382 26 224 3.9E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS00520 e216053f1c81fa3a13c2fefd617e8ce6 250 SUPERFAMILY SSF52540 1 234 4.88E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS00520 e216053f1c81fa3a13c2fefd617e8ce6 250 Pfam PF00005 ABC transporter 17 168 4.5E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS00520 e216053f1c81fa3a13c2fefd617e8ce6 250 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS06105 54e36306f9c5ab560bf1a2d2c67f135f 263 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 41 258 2.3E-59 T 11-11-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 WS_RS06105 54e36306f9c5ab560bf1a2d2c67f135f 263 Pfam PF02666 Phosphatidylserine decarboxylase 52 258 1.8E-52 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 Pfam PF00072 Response regulator receiver domain 181 286 3.1E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 PIRSF PIRSF002867 1 303 1.1E-82 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 SUPERFAMILY SSF50341 18 159 4.84E-17 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 Gene3D G3DSA:3.40.50.2300 179 300 1.1E-21 T 11-11-2016 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 Gene3D G3DSA:2.40.50.180 66 104 5.3E-4 T 11-11-2016 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 SMART SM00448 179 295 8.5E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 SMART SM00260 17 159 4.5E-5 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 Pfam PF01584 CheW-like domain 22 159 1.9E-21 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS08775 0da00a671927e7ba738ffa977c8bb10b 314 SUPERFAMILY SSF52172 179 301 2.56E-20 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS03795 e08fa544a8e876a6a3e73653f486e2ef 235 Gene3D G3DSA:3.40.50.300 49 226 7.0E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03795 e08fa544a8e876a6a3e73653f486e2ef 235 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 46 203 8.9E-25 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain WS_RS03795 e08fa544a8e876a6a3e73653f486e2ef 235 PIRSF PIRSF005624 10 234 3.8E-80 T 11-11-2016 WS_RS03795 e08fa544a8e876a6a3e73653f486e2ef 235 SUPERFAMILY SSF52540 10 229 4.59E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS03795 e08fa544a8e876a6a3e73653f486e2ef 235 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 18 226 1.4E-81 T 11-11-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 WS_RS00505 d7cef3675e3600423a50925f030d2f9b 307 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 299 2.9E-86 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 WS_RS00505 d7cef3675e3600423a50925f030d2f9b 307 SUPERFAMILY SSF53659 2 304 1.22E-78 T 11-11-2016 WS_RS00505 d7cef3675e3600423a50925f030d2f9b 307 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 2 302 1.1E-91 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 WS_RS00505 d7cef3675e3600423a50925f030d2f9b 307 Gene3D G3DSA:3.40.718.10 2 304 1.1E-97 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 SUPERFAMILY SSF51306 27 258 1.41E-55 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 Gene3D G3DSA:2.10.109.10 204 251 1.5E-45 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 Gene3D G3DSA:2.10.109.10 26 115 1.5E-45 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 244 3.0E-35 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 11-11-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 2.0E-16 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 105 117 2.0E-16 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 2.0E-16 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 WS_RS06425 01708e36ca8c42cb52180eab38dec133 275 Pfam PF00717 Peptidase S24-like 35 122 9.2E-13 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B WS_RS08970 28c623a939fca3d5740e3dfe8932b68b 327 Gene3D G3DSA:3.40.50.2000 178 327 2.1E-24 T 11-11-2016 WS_RS08970 28c623a939fca3d5740e3dfe8932b68b 327 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 327 4.5E-106 T 11-11-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 WS_RS08970 28c623a939fca3d5740e3dfe8932b68b 327 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 298 1.5E-44 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 WS_RS08970 28c623a939fca3d5740e3dfe8932b68b 327 SUPERFAMILY SSF53756 2 327 6.59E-62 T 11-11-2016 WS_RS08970 28c623a939fca3d5740e3dfe8932b68b 327 Gene3D G3DSA:3.40.50.2000 2 154 3.7E-29 T 11-11-2016 WS_RS07985 5e7fc186400acd543ccefe1662797dc3 72 SUPERFAMILY SSF50249 1 71 4.71E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS07985 5e7fc186400acd543ccefe1662797dc3 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.1E-27 T 11-11-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 WS_RS07985 5e7fc186400acd543ccefe1662797dc3 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.08 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 WS_RS07985 5e7fc186400acd543ccefe1662797dc3 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 8.5E-35 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 WS_RS07985 5e7fc186400acd543ccefe1662797dc3 72 Gene3D G3DSA:2.40.50.140 1 72 3.4E-37 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS07985 5e7fc186400acd543ccefe1662797dc3 72 SMART SM00316 4 72 1.6E-4 T 11-11-2016 IPR022967 RNA-binding domain, S1 WS_RS00970 4f1beeed96340c2aebfa0896b57496b9 255 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 251 3.9E-62 T 11-11-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 WS_RS00970 4f1beeed96340c2aebfa0896b57496b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.3E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 WS_RS00970 4f1beeed96340c2aebfa0896b57496b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.3E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 WS_RS00970 4f1beeed96340c2aebfa0896b57496b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 2.3E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 WS_RS00970 4f1beeed96340c2aebfa0896b57496b9 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.3E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 WS_RS00970 4f1beeed96340c2aebfa0896b57496b9 255 Pfam PF01311 Bacterial export proteins, family 1 13 243 2.7E-56 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 WS_RS00595 015a2917ae193328670de9d04c786f41 296 Pfam PF00892 EamA-like transporter family 8 138 9.2E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS00595 015a2917ae193328670de9d04c786f41 296 Pfam PF00892 EamA-like transporter family 155 283 1.4E-15 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 WS_RS00595 015a2917ae193328670de9d04c786f41 296 SUPERFAMILY SSF103481 201 286 5.62E-11 T 11-11-2016 WS_RS00595 015a2917ae193328670de9d04c786f41 296 SUPERFAMILY SSF103481 40 140 6.15E-6 T 11-11-2016 WS_RS01885 1d1cab9d2bb8a9afd8b9274c400144fc 263 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 143 230 5.3E-23 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 WS_RS01885 1d1cab9d2bb8a9afd8b9274c400144fc 263 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 22 135 7.7E-27 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 WS_RS01885 1d1cab9d2bb8a9afd8b9274c400144fc 263 Gene3D G3DSA:3.10.50.40 120 232 1.0E-38 T 11-11-2016 WS_RS01885 1d1cab9d2bb8a9afd8b9274c400144fc 263 SUPERFAMILY SSF54534 26 232 2.55E-55 T 11-11-2016 WS_RS01885 1d1cab9d2bb8a9afd8b9274c400144fc 263 Gene3D G3DSA:1.10.287.460 13 119 7.0E-31 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 WS_RS01140 6c9b6aca4d6dc539505d2ee0a28ad47b 207 Gene3D G3DSA:1.20.1330.10 51 135 6.8E-6 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 WS_RS01140 6c9b6aca4d6dc539505d2ee0a28ad47b 207 SUPERFAMILY SSF64518 50 143 2.22E-8 T 11-11-2016 WS_RS01140 6c9b6aca4d6dc539505d2ee0a28ad47b 207 Pfam PF16522 Flagellar FLiS export co-chaperone, HP1076 14 183 2.4E-25 T 11-11-2016 IPR032411 Flagellar FLiS export co-chaperone, HP1076 WS_RS05855 34e6be1d10a5ffe363935c00f0c8deea 240 Gene3D G3DSA:2.40.128.130 131 213 3.6E-5 T 11-11-2016 IPR005546 Autotransporter beta-domain WS_RS05855 34e6be1d10a5ffe363935c00f0c8deea 240 Pfam PF06629 MltA-interacting protein MipA 23 240 1.2E-49 T 11-11-2016 IPR010583 MltA-interacting MipA WS_RS03390 02f0b1219dabc35a96ed2b111926ac82 190 Pfam PF02132 RecR protein 41 78 1.8E-13 T 11-11-2016 IPR023628 Recombination protein RecR, C4-type zinc finger WS_RS03390 02f0b1219dabc35a96ed2b111926ac82 190 TIGRFAM TIGR00615 recR: recombination protein RecR 6 187 2.1E-55 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 WS_RS03390 02f0b1219dabc35a96ed2b111926ac82 190 Hamap MF_00017 Recombination protein RecR [recR]. 1 190 57.592 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 WS_RS03390 02f0b1219dabc35a96ed2b111926ac82 190 SUPERFAMILY SSF111304 5 190 1.57E-54 T 11-11-2016 IPR023627 Recombination protein RecR WS_RS10765 9a52b4410fecdbd105e2fe0d7f56c8a3 298 Pfam PF02470 MlaD protein 40 117 9.1E-12 T 11-11-2016 IPR003399 Mce/MlaD WS_RS06535 1db4aa5935e26aa307965f59c82ee15f 277 Gene3D G3DSA:3.40.190.10 20 153 3.0E-33 T 11-11-2016 WS_RS06535 1db4aa5935e26aa307965f59c82ee15f 277 Gene3D G3DSA:3.40.190.10 190 275 1.0E-15 T 11-11-2016 WS_RS06535 1db4aa5935e26aa307965f59c82ee15f 277 SUPERFAMILY SSF53850 27 262 5.04E-27 T 11-11-2016 WS_RS06535 1db4aa5935e26aa307965f59c82ee15f 277 Pfam PF12849 PBP superfamily domain 29 252 4.6E-29 T 11-11-2016 IPR024370 PBP domain WS_RS01495 6e4e40c078b3e83877741c7c3fddf1c2 337 SUPERFAMILY SSF53335 3 325 1.99E-54 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS01495 6e4e40c078b3e83877741c7c3fddf1c2 337 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 57 265 2.6E-11 T 11-11-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA Reactome: R-HSA-6799198 WS_RS05555 5bad144d973257791476eb94aa6b31c3 322 SUPERFAMILY SSF161098 87 298 2.35E-14 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS05555 5bad144d973257791476eb94aa6b31c3 322 Gene3D G3DSA:1.10.3720.10 63 299 2.5E-4 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS05555 5bad144d973257791476eb94aa6b31c3 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 313 5.6E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 Pfam PF01546 Peptidase family M20/M25/M40 62 363 1.1E-37 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 SUPERFAMILY SSF55031 173 278 3.29E-21 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 SUPERFAMILY SSF53187 3 172 2.51E-54 T 11-11-2016 WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 SUPERFAMILY SSF53187 285 361 2.51E-54 T 11-11-2016 WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 Gene3D G3DSA:3.30.70.360 182 274 1.1E-22 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 364 42.324 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 Pfam PF07687 Peptidase dimerisation domain 169 270 4.5E-14 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 359 1.0E-123 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 Gene3D G3DSA:3.40.630.10 2 181 5.0E-62 T 11-11-2016 WS_RS02875 16eff78ecd7c53ce07fcdf43dca765df 364 Gene3D G3DSA:3.40.630.10 309 362 5.0E-62 T 11-11-2016 WS_RS05980 d85b1fb0957467f27b695972de1b73d6 93 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 7 86 4.1E-30 T 11-11-2016 IPR003849 Preprotein translocase YajC WS_RS05980 d85b1fb0957467f27b695972de1b73d6 93 Pfam PF02699 Preprotein translocase subunit 10 85 7.5E-27 T 11-11-2016 IPR003849 Preprotein translocase YajC WS_RS05980 d85b1fb0957467f27b695972de1b73d6 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 46 3.4E-15 T 11-11-2016 IPR003849 Preprotein translocase YajC WS_RS05980 d85b1fb0957467f27b695972de1b73d6 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 8 28 3.4E-15 T 11-11-2016 IPR003849 Preprotein translocase YajC WS_RS05980 d85b1fb0957467f27b695972de1b73d6 93 SMART SM01323 6 88 3.2E-34 T 11-11-2016 IPR003849 Preprotein translocase YajC WS_RS00195 f04ea1391393052e47a315125acb306a 201 Pfam PF02397 Bacterial sugar transferase 7 181 1.3E-55 T 11-11-2016 IPR003362 Bacterial sugar transferase WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Pfam PF10396 GTP-binding protein TrmE N-terminus 12 126 4.6E-36 T 11-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 SUPERFAMILY SSF52540 78 158 5.31E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 SUPERFAMILY SSF52540 194 373 5.31E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 223 349 1.5E-23 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Pfam PF01926 50S ribosome-binding GTPase 225 341 1.3E-26 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 18 456 2.1E-123 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 11 456 30.764 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Gene3D G3DSA:1.20.120.430 387 456 1.6E-44 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Gene3D G3DSA:1.20.120.430 128 188 1.6E-44 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Gene3D G3DSA:1.20.120.430 254 277 1.6E-44 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Pfam PF12631 MnmE helical domain 129 453 2.5E-43 T 11-11-2016 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Gene3D G3DSA:3.40.50.300 292 382 2.9E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Gene3D G3DSA:3.40.50.300 217 253 4.2E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06150 2261ae00a1ab81999bddf9cbfdde7062 456 Gene3D G3DSA:3.30.1360.120 6 127 4.7E-41 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 WS_RS04610 bd84086d154bd7275cc9c9d03c3721fa 284 Pfam PF07805 HipA-like N-terminal domain 215 281 1.4E-4 T 11-11-2016 IPR012894 HipA, N-terminal subdomain 2 WS_RS04610 bd84086d154bd7275cc9c9d03c3721fa 284 Gene3D G3DSA:1.10.10.10 10 58 3.3E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 Pfam PF01264 Chorismate synthase 10 342 7.3E-131 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 PIRSF PIRSF001456 1 357 3.7E-134 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 Hamap MF_00300 Chorismate synthase [aroC]. 8 349 37.154 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 ProSitePatterns PS00789 Chorismate synthase signature 3. 316 332 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 TIGRFAM TIGR00033 aroC: chorismate synthase 10 344 1.3E-125 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 SUPERFAMILY SSF103263 1 348 1.31E-135 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 ProSitePatterns PS00788 Chorismate synthase signature 2. 122 138 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS08915 6f2e3fceaedb5d78c6e5dfe9b908b5ee 360 Gene3D G3DSA:3.60.150.10 10 352 2.2E-142 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 WS_RS01900 76d8f0396d717fb5a374994503ddf329 893 Pfam PF01578 Cytochrome C assembly protein 651 855 4.4E-39 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 WS_RS01900 76d8f0396d717fb5a374994503ddf329 893 Pfam PF05140 ResB-like family 209 282 1.6E-14 T 11-11-2016 IPR007816 ResB-like domain WS_RS01900 76d8f0396d717fb5a374994503ddf329 893 Pfam PF05140 ResB-like family 70 114 3.7E-8 T 11-11-2016 IPR007816 ResB-like domain WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-11-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 236 31.849 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 174 182 - T 11-11-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 234 1.7E-75 T 11-11-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 Gene3D G3DSA:3.30.470.20 94 222 3.4E-52 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 Gene3D G3DSA:3.30.200.20 6 93 1.0E-36 T 11-11-2016 WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 SUPERFAMILY SSF56104 3 235 1.8E-80 T 11-11-2016 WS_RS02965 2421b132ec7e24e1f304a51c31f3b45e 236 Pfam PF01259 SAICAR synthetase 6 233 1.2E-65 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 WS_RS10695 18349cf3b2341aa3d7cbfa4752e89d9f 562 Pfam PF00672 HAMP domain 216 284 7.7E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS10695 18349cf3b2341aa3d7cbfa4752e89d9f 562 SMART SM00267 395 562 1.2E-51 T 11-11-2016 IPR000160 GGDEF domain WS_RS10695 18349cf3b2341aa3d7cbfa4752e89d9f 562 SUPERFAMILY SSF55073 411 560 5.96E-37 T 11-11-2016 IPR029787 Nucleotide cyclase WS_RS10695 18349cf3b2341aa3d7cbfa4752e89d9f 562 SMART SM00304 235 288 2.9E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 WS_RS10695 18349cf3b2341aa3d7cbfa4752e89d9f 562 Gene3D G3DSA:3.30.70.270 408 560 4.3E-43 T 11-11-2016 WS_RS10695 18349cf3b2341aa3d7cbfa4752e89d9f 562 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 402 560 2.3E-41 T 11-11-2016 IPR000160 GGDEF domain WS_RS10695 18349cf3b2341aa3d7cbfa4752e89d9f 562 Pfam PF00990 Diguanylate cyclase, GGDEF domain 406 558 2.7E-37 T 11-11-2016 IPR000160 GGDEF domain WS_RS08650 d6aa37a21e5d34d7854fba1418d77318 215 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 10 191 5.0E-100 T 11-11-2016 WS_RS08650 d6aa37a21e5d34d7854fba1418d77318 215 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 128 209 9.1E-7 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 WS_RS03880 37565f5b319558dcf1f29ff4a48a94f9 135 Pfam PF00581 Rhodanese-like domain 24 124 8.9E-14 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03880 37565f5b319558dcf1f29ff4a48a94f9 135 Gene3D G3DSA:3.40.250.10 22 132 2.3E-24 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03880 37565f5b319558dcf1f29ff4a48a94f9 135 SMART SM00450 23 129 2.2E-12 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS03880 37565f5b319558dcf1f29ff4a48a94f9 135 SUPERFAMILY SSF52821 10 132 7.33E-24 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS05395 ba14e5c904d072317b7b9399c41e34b9 262 Pfam PF00005 ABC transporter 17 164 6.1E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS05395 ba14e5c904d072317b7b9399c41e34b9 262 SMART SM00382 26 213 2.2E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS05395 ba14e5c904d072317b7b9399c41e34b9 262 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS05395 ba14e5c904d072317b7b9399c41e34b9 262 SUPERFAMILY SSF52540 5 232 1.74E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05395 ba14e5c904d072317b7b9399c41e34b9 262 Gene3D G3DSA:3.40.50.300 4 238 9.6E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS02685 cb164ab870cc8ba5c0488ef116f04b2f 77 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.37 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02685 cb164ab870cc8ba5c0488ef116f04b2f 77 SUPERFAMILY SSF54565 3 73 3.92E-27 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02685 cb164ab870cc8ba5c0488ef116f04b2f 77 Gene3D G3DSA:3.30.1320.10 4 74 6.1E-28 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02685 cb164ab870cc8ba5c0488ef116f04b2f 77 TIGRFAM TIGR00002 S16: ribosomal protein bS16 5 73 1.7E-27 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02685 cb164ab870cc8ba5c0488ef116f04b2f 77 Pfam PF00886 Ribosomal protein S16 9 67 3.0E-23 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS02685 cb164ab870cc8ba5c0488ef116f04b2f 77 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-11-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08835 bdb2d7c148f3e8198c75915f4c087023 380 SUPERFAMILY SSF88713 166 378 2.15E-57 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 WS_RS08835 bdb2d7c148f3e8198c75915f4c087023 380 Gene3D G3DSA:3.20.20.370 165 378 2.9E-68 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 WS_RS08835 bdb2d7c148f3e8198c75915f4c087023 380 Pfam PF04748 Divergent polysaccharide deacetylase 171 377 5.6E-62 T 11-11-2016 IPR006837 Divergent polysaccharide deacetylase WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 219 225 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 93 109 1.4E-13 T 11-11-2016 WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 251 275 1.4E-13 T 11-11-2016 WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 124 138 1.4E-13 T 11-11-2016 WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 228 1.4E-13 T 11-11-2016 WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 Pfam PF02384 N-6 DNA Methylase 87 327 1.1E-16 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 Gene3D G3DSA:3.40.50.150 96 349 7.3E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS09075 c797b7dc5967c77361fd633d1251d0b9 615 SUPERFAMILY SSF53335 4 335 1.78E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS06470 e9282a4e66a506b524d4b6b55c5f0e9c 285 Pfam PF13186 Iron-sulfur cluster-binding domain 208 273 9.3E-10 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain WS_RS06470 e9282a4e66a506b524d4b6b55c5f0e9c 285 Gene3D G3DSA:3.20.20.70 4 276 2.0E-22 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS06470 e9282a4e66a506b524d4b6b55c5f0e9c 285 SUPERFAMILY SSF102114 4 275 6.93E-21 T 11-11-2016 WS_RS01185 b64f5e0da83063b250d1a3dec74c5551 71 Pfam PF01192 RNA polymerase Rpb6 18 63 1.9E-5 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 WS_RS01185 b64f5e0da83063b250d1a3dec74c5551 71 SMART SM01409 10 65 2.1E-4 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 WS_RS01185 b64f5e0da83063b250d1a3dec74c5551 71 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 4 66 10.878 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 WS_RS01185 b64f5e0da83063b250d1a3dec74c5551 71 SUPERFAMILY SSF63562 5 65 2.49E-12 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 WS_RS01185 b64f5e0da83063b250d1a3dec74c5551 71 Gene3D G3DSA:3.90.940.10 19 65 1.7E-4 T 11-11-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 Gene3D G3DSA:2.40.340.10 337 396 1.0E-5 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 SUPERFAMILY SSF63882 3 171 3.66E-45 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 Gene3D G3DSA:2.170.190.11 48 127 3.3E-23 T 11-11-2016 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 249 283 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 Gene3D G3DSA:3.90.105.10 128 157 1.4E-11 T 11-11-2016 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 SUPERFAMILY SSF63867 323 396 1.96E-11 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 SMART SM00852 177 314 1.9E-27 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 164 1.3E-29 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 174 307 2.8E-31 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 Pfam PF03454 MoeA C-terminal region (domain IV) 328 395 6.9E-14 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 Gene3D G3DSA:3.40.980.10 158 323 1.0E-47 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 Pfam PF00994 Probable molybdopterin binding domain 178 313 1.0E-23 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS04005 45ae03eab76480b0e0b26a85d58d713b 410 SUPERFAMILY SSF53218 174 320 5.5E-34 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS03520 29a8b00cf05f8b41cea18877c5f16971 240 SUPERFAMILY SSF89155 5 203 4.71E-33 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS03520 29a8b00cf05f8b41cea18877c5f16971 240 Pfam PF02613 Nitrate reductase delta subunit 48 161 4.8E-9 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS03520 29a8b00cf05f8b41cea18877c5f16971 240 Gene3D G3DSA:1.10.3480.10 3 206 2.1E-17 T 11-11-2016 IPR020945 DMSO/Nitrate reductase chaperone WS_RS09460 93267e75058441282df8bc5aa88d01dd 459 Pfam PF01551 Peptidase family M23 336 428 3.5E-25 T 11-11-2016 IPR016047 Peptidase M23 WS_RS09460 93267e75058441282df8bc5aa88d01dd 459 SUPERFAMILY SSF51261 179 426 3.24E-46 T 11-11-2016 IPR011055 Duplicated hybrid motif WS_RS09460 93267e75058441282df8bc5aa88d01dd 459 Gene3D G3DSA:2.70.70.10 308 436 4.7E-34 T 11-11-2016 WS_RS05170 a9a583e4c240b47b4a3d26f4586635a4 128 Gene3D G3DSA:3.40.50.2300 3 126 7.0E-23 T 11-11-2016 WS_RS05170 a9a583e4c240b47b4a3d26f4586635a4 128 SMART SM00448 3 122 1.0E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS05170 a9a583e4c240b47b4a3d26f4586635a4 128 Pfam PF00072 Response regulator receiver domain 5 122 1.8E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS05170 a9a583e4c240b47b4a3d26f4586635a4 128 SUPERFAMILY SSF52172 3 127 1.2E-22 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS00630 16a1ee8cc1e1c4dbe3a50f274e40c34f 559 SUPERFAMILY SSF143975 1 375 1.15E-130 T 11-11-2016 WS_RS00630 16a1ee8cc1e1c4dbe3a50f274e40c34f 559 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 44.856 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 WS_RS00630 16a1ee8cc1e1c4dbe3a50f274e40c34f 559 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 WS_RS00630 16a1ee8cc1e1c4dbe3a50f274e40c34f 559 SUPERFAMILY SSF52016 376 556 5.81E-61 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel WS_RS00630 16a1ee8cc1e1c4dbe3a50f274e40c34f 559 Pfam PF00920 Dehydratase family 31 553 3.8E-215 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 WS_RS00630 16a1ee8cc1e1c4dbe3a50f274e40c34f 559 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 WS_RS00630 16a1ee8cc1e1c4dbe3a50f274e40c34f 559 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 1.9E-232 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 WS_RS08235 b750fd7f5bd9b6f6ffe9d4c1ab3bc92a 425 PIRSF PIRSF000139 1 425 7.1E-113 T 11-11-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit WS_RS08235 b750fd7f5bd9b6f6ffe9d4c1ab3bc92a 425 Gene3D G3DSA:1.10.1060.10 8 97 4.9E-16 T 11-11-2016 WS_RS08235 b750fd7f5bd9b6f6ffe9d4c1ab3bc92a 425 SUPERFAMILY SSF46548 9 91 2.96E-16 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 WS_RS08235 b750fd7f5bd9b6f6ffe9d4c1ab3bc92a 425 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS08235 b750fd7f5bd9b6f6ffe9d4c1ab3bc92a 425 Pfam PF02754 Cysteine-rich domain 314 397 2.9E-11 T 11-11-2016 IPR004017 Cysteine-rich domain WS_RS08235 b750fd7f5bd9b6f6ffe9d4c1ab3bc92a 425 Pfam PF02754 Cysteine-rich domain 177 261 1.5E-15 T 11-11-2016 IPR004017 Cysteine-rich domain WS_RS08235 b750fd7f5bd9b6f6ffe9d4c1ab3bc92a 425 Pfam PF13534 4Fe-4S dicluster domain 11 76 3.0E-8 T 11-11-2016 WS_RS03590 279fb3823e83b2f4a284b5f2b1fd791a 693 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 587 3.2E-83 T 11-11-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit WS_RS03590 279fb3823e83b2f4a284b5f2b1fd791a 693 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 35 655 3.6E-194 T 11-11-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein WS_RS06000 28f8f761d5c4a53cd95ac0b536ed85f4 125 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 WS_RS06000 28f8f761d5c4a53cd95ac0b536ed85f4 125 SMART SM00422 9 78 1.0E-25 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 WS_RS06000 28f8f761d5c4a53cd95ac0b536ed85f4 125 SUPERFAMILY SSF46955 9 103 1.05E-20 T 11-11-2016 IPR009061 Putative DNA-binding domain WS_RS06000 28f8f761d5c4a53cd95ac0b536ed85f4 125 Gene3D G3DSA:1.10.1660.10 9 99 3.0E-23 T 11-11-2016 WS_RS06000 28f8f761d5c4a53cd95ac0b536ed85f4 125 Pfam PF13411 MerR HTH family regulatory protein 9 76 3.2E-17 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 WS_RS07840 06e0dc58cb9c835156342ca277fde5b2 100 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 5 100 2.3E-27 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 WS_RS07840 06e0dc58cb9c835156342ca277fde5b2 100 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 100 16.964 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 WS_RS07840 06e0dc58cb9c835156342ca277fde5b2 100 Pfam PF02049 Flagellar hook-basal body complex protein FliE 15 100 4.0E-25 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 WS_RS07840 06e0dc58cb9c835156342ca277fde5b2 100 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 64 80 4.2E-10 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 WS_RS07840 06e0dc58cb9c835156342ca277fde5b2 100 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 30 46 4.2E-10 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 WS_RS07840 06e0dc58cb9c835156342ca277fde5b2 100 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 85 98 4.2E-10 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 WS_RS01480 f4a1d8ce79826bc53cde92a25b4ce620 255 Pfam PF13437 HlyD family secretion protein 161 240 3.0E-5 T 11-11-2016 WS_RS01480 f4a1d8ce79826bc53cde92a25b4ce620 255 SUPERFAMILY SSF111369 21 204 5.75E-5 T 11-11-2016 WS_RS02285 8dfb8109f253c25563b3eb69da9fd002 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.087 T 11-11-2016 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS02285 8dfb8109f253c25563b3eb69da9fd002 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 56 6.2E-12 T 11-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 WS_RS02285 8dfb8109f253c25563b3eb69da9fd002 59 Gene3D G3DSA:1.20.5.1030 1 59 1.9E-15 T 11-11-2016 WS_RS02285 8dfb8109f253c25563b3eb69da9fd002 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 58 2.8E-11 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 WS_RS08850 529eeb8d55b5c888789d4b08f755461f 127 SUPERFAMILY SSF53098 1 126 1.42E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS08850 529eeb8d55b5c888789d4b08f755461f 127 SMART SM00732 1 95 1.1E-10 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 WS_RS08850 529eeb8d55b5c888789d4b08f755461f 127 Gene3D G3DSA:3.30.420.140 1 125 2.2E-28 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 WS_RS08850 529eeb8d55b5c888789d4b08f755461f 127 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 124 5.4E-14 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 WS_RS08850 529eeb8d55b5c888789d4b08f755461f 127 Pfam PF03652 Holliday junction resolvase 2 124 6.9E-26 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 WS_RS00775 d69dd744d18546e80b695fbcd642ca48 116 SUPERFAMILY SSF57716 81 114 8.15E-9 T 11-11-2016 WS_RS00775 d69dd744d18546e80b695fbcd642ca48 116 SUPERFAMILY SSF109635 1 80 1.44E-13 T 11-11-2016 WS_RS00775 d69dd744d18546e80b695fbcd642ca48 116 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 11-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site WS_RS00775 d69dd744d18546e80b695fbcd642ca48 116 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 114 1.7E-11 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 WS_RS01875 0de26fe652aa459beb037d989299fa5e 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 470 5.9E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01875 0de26fe652aa459beb037d989299fa5e 475 SUPERFAMILY SSF47384 247 325 4.12E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 WS_RS01875 0de26fe652aa459beb037d989299fa5e 475 Gene3D G3DSA:3.30.565.10 326 471 4.2E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01875 0de26fe652aa459beb037d989299fa5e 475 SMART SM00387 366 475 6.4E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS01875 0de26fe652aa459beb037d989299fa5e 475 Pfam PF11845 Protein of unknown function (DUF3365) 12 200 2.6E-28 T 11-11-2016 IPR021796 Protein of unknown function DUF3365 WS_RS01875 0de26fe652aa459beb037d989299fa5e 475 SUPERFAMILY SSF55874 316 471 4.32E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain WS_RS04685 d035780c7902bf266c5a05dd207690a6 182 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 179 24.609 T 11-11-2016 IPR022929 Putative manganese efflux pump MntP WS_RS04685 d035780c7902bf266c5a05dd207690a6 182 Pfam PF02659 Putative manganese efflux pump 29 176 7.1E-50 T 11-11-2016 IPR003810 Putative manganese efflux pump WS_RS01010 51003464e01701c3df34526371f83b87 156 Pfam PF00581 Rhodanese-like domain 44 144 1.9E-7 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS01010 51003464e01701c3df34526371f83b87 156 SUPERFAMILY SSF52821 21 146 1.09E-12 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS01010 51003464e01701c3df34526371f83b87 156 SMART SM00450 42 150 0.0075 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS01010 51003464e01701c3df34526371f83b87 156 Gene3D G3DSA:3.40.250.10 38 146 2.4E-13 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 Pfam PF03459 TOBE domain 124 186 3.9E-17 T 11-11-2016 IPR005116 Transport-associated OB, type 1 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 Pfam PF03459 TOBE domain 195 255 9.1E-12 T 11-11-2016 IPR005116 Transport-associated OB, type 1 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 188 8.3E-25 T 11-11-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 194 257 2.7E-18 T 11-11-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 83 1.2E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 SUPERFAMILY SSF50331 122 189 2.11E-21 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 SUPERFAMILY SSF46785 1 104 1.54E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 Gene3D G3DSA:2.40.50.100 125 189 3.9E-29 T 11-11-2016 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 PIRSF PIRSF005763 1 258 3.3E-99 T 11-11-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 Gene3D G3DSA:2.40.50.100 194 257 1.4E-22 T 11-11-2016 WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 17 107 1.7E-32 T 11-11-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 Gene3D G3DSA:1.10.10.10 1 124 1.3E-48 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS08510 b18bd8f6ca4be80a9ccf52f1091cb9fe 258 SUPERFAMILY SSF50331 172 255 1.3E-16 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal WS_RS06115 48501cc02a3e33cc4155adcc70648f60 392 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 242 270 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 WS_RS06115 48501cc02a3e33cc4155adcc70648f60 392 SUPERFAMILY SSF53955 199 383 6.76E-37 T 11-11-2016 IPR023346 Lysozyme-like domain WS_RS06115 48501cc02a3e33cc4155adcc70648f60 392 Gene3D G3DSA:1.10.530.10 217 386 1.8E-39 T 11-11-2016 WS_RS06115 48501cc02a3e33cc4155adcc70648f60 392 Pfam PF01464 Transglycosylase SLT domain 225 347 2.2E-27 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 WS_RS06115 48501cc02a3e33cc4155adcc70648f60 392 Pfam PF11873 Domain of unknown function (DUF3393) 3 220 9.0E-77 T 11-11-2016 IPR024570 Murein transglycosylase-C, N-terminal WS_RS10055 515ced9dd0927bd4c0a3f4ce1487728b 130 Pfam PF14697 4Fe-4S dicluster domain 56 102 3.6E-9 T 11-11-2016 WS_RS10055 515ced9dd0927bd4c0a3f4ce1487728b 130 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS10055 515ced9dd0927bd4c0a3f4ce1487728b 130 SUPERFAMILY SSF54862 23 104 5.76E-19 T 11-11-2016 WS_RS10055 515ced9dd0927bd4c0a3f4ce1487728b 130 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 37 110 1.3E-27 T 11-11-2016 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 WS_RS10055 515ced9dd0927bd4c0a3f4ce1487728b 130 Gene3D G3DSA:3.30.70.20 47 116 2.2E-14 T 11-11-2016 WS_RS10055 515ced9dd0927bd4c0a3f4ce1487728b 130 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05440 aec3fb77a9c701b58f77a50e039c68c7 188 SUPERFAMILY SSF116734 9 188 2.62E-35 T 11-11-2016 WS_RS05440 aec3fb77a9c701b58f77a50e039c68c7 188 Pfam PF01420 Type I restriction modification DNA specificity domain 15 171 3.6E-23 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 WS_RS02550 508413ab6bd46cc638ce6b240a72b888 194 Pfam PF01618 MotA/TolQ/ExbB proton channel family 76 181 3.3E-28 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 WS_RS02550 508413ab6bd46cc638ce6b240a72b888 194 PIRSF PIRSF037713 3 191 3.0E-93 T 11-11-2016 IPR017269 Biopolymer transport ExbB-like protein 1 WS_RS01640 62836415e7a8137811599397fe2e02af 377 Pfam PF02080 TrkA-C domain 295 365 1.7E-12 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS01640 62836415e7a8137811599397fe2e02af 377 Pfam PF02254 TrkA-N domain 139 259 1.8E-16 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 WS_RS01640 62836415e7a8137811599397fe2e02af 377 SUPERFAMILY SSF51735 135 282 1.18E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01640 62836415e7a8137811599397fe2e02af 377 Gene3D G3DSA:3.30.70.1450 292 366 8.2E-12 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS01640 62836415e7a8137811599397fe2e02af 377 SUPERFAMILY SSF116726 285 363 1.27E-12 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 WS_RS01640 62836415e7a8137811599397fe2e02af 377 Gene3D G3DSA:3.40.50.720 135 282 2.0E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS01640 62836415e7a8137811599397fe2e02af 377 SUPERFAMILY SSF81324 27 159 2.88E-12 T 11-11-2016 WS_RS01640 62836415e7a8137811599397fe2e02af 377 Gene3D G3DSA:1.10.287.70 34 116 1.6E-7 T 11-11-2016 WS_RS07005 b56bfe2cd3d99784c5a4e117c1f3001b 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 325 7.1E-35 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 WS_RS07005 b56bfe2cd3d99784c5a4e117c1f3001b 347 Gene3D G3DSA:1.10.3470.10 110 237 2.6E-4 T 11-11-2016 IPR029022 ABC transporter, BtuC-like WS_RS02805 af02c0bab07bef2983c91c662bb83ea2 188 SUPERFAMILY SSF53474 3 163 4.78E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS02805 af02c0bab07bef2983c91c662bb83ea2 188 Gene3D G3DSA:3.40.50.1820 3 113 3.2E-13 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS02805 af02c0bab07bef2983c91c662bb83ea2 188 Pfam PF01738 Dienelactone hydrolase family 3 119 1.6E-13 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 WS_RS09935 6b5ff1396d1a5f10deb2f460e205c0a9 226 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 221 7.0E-101 T 11-11-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 WS_RS09935 6b5ff1396d1a5f10deb2f460e205c0a9 226 Pfam PF02348 Cytidylyltransferase 3 127 1.6E-29 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 WS_RS09935 6b5ff1396d1a5f10deb2f460e205c0a9 226 SUPERFAMILY SSF53448 3 220 2.14E-52 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09935 6b5ff1396d1a5f10deb2f460e205c0a9 226 Gene3D G3DSA:3.90.550.10 3 220 1.5E-67 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 Gene3D G3DSA:1.10.150.170 109 209 3.3E-28 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 SUPERFAMILY SSF81799 110 207 3.92E-26 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 PIRSF PIRSF004486 1 303 3.2E-100 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 301 3.1E-99 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 302 33.734 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 Gene3D G3DSA:3.40.50.150 5 106 1.4E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 Gene3D G3DSA:3.40.50.150 210 300 1.4E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 Pfam PF01795 MraW methylase family 3 301 3.6E-103 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 SUPERFAMILY SSF53335 207 300 1.15E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00850 f2756eb5f5a3b6d3a850f835480350c9 303 SUPERFAMILY SSF53335 4 109 1.15E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS08845 f9ce09d11b7a2ea3b47d7dc97df1ae4e 259 SUPERFAMILY SSF102405 7 174 4.06E-25 T 11-11-2016 WS_RS08845 f9ce09d11b7a2ea3b47d7dc97df1ae4e 259 Pfam PF02481 DNA recombination-mediator protein A 8 187 7.3E-51 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 WS_RS08845 f9ce09d11b7a2ea3b47d7dc97df1ae4e 259 Gene3D G3DSA:3.40.50.450 32 175 1.3E-9 T 11-11-2016 WS_RS02025 0de5d27370c0f6b74f5049791810e1a4 325 SUPERFAMILY SSF111369 20 245 5.23E-22 T 11-11-2016 WS_RS02025 0de5d27370c0f6b74f5049791810e1a4 325 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 11 319 5.8E-68 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 WS_RS02025 0de5d27370c0f6b74f5049791810e1a4 325 Gene3D G3DSA:2.40.50.100 137 168 4.8E-13 T 11-11-2016 WS_RS02025 0de5d27370c0f6b74f5049791810e1a4 325 Gene3D G3DSA:2.40.50.100 31 62 4.8E-13 T 11-11-2016 WS_RS02025 0de5d27370c0f6b74f5049791810e1a4 325 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 29 237 3.6E-21 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain WS_RS09690 d6082910b4ca9ab6eb009b44f45fc37b 147 Pfam PF02050 Flagellar FliJ protein 18 134 3.8E-13 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 WS_RS05560 cd7f9131450d8386acc8e76f49e89c07 525 PIRSF PIRSF002741 41 510 2.9E-72 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 WS_RS05560 cd7f9131450d8386acc8e76f49e89c07 525 SUPERFAMILY SSF53850 31 499 5.79E-96 T 11-11-2016 WS_RS05560 cd7f9131450d8386acc8e76f49e89c07 525 Gene3D G3DSA:3.10.105.10 281 489 1.6E-40 T 11-11-2016 WS_RS05560 cd7f9131450d8386acc8e76f49e89c07 525 Gene3D G3DSA:3.90.76.10 41 183 7.1E-28 T 11-11-2016 WS_RS05560 cd7f9131450d8386acc8e76f49e89c07 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 436 7.5E-73 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain WS_RS05560 cd7f9131450d8386acc8e76f49e89c07 525 Gene3D G3DSA:3.40.190.10 184 280 2.1E-21 T 11-11-2016 WS_RS04575 f6c5f5f6db3de92d5f492df141b81055 260 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 253 1.6E-104 T 11-11-2016 WS_RS04575 f6c5f5f6db3de92d5f492df141b81055 260 Gene3D G3DSA:3.20.20.70 5 255 1.1E-50 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS04575 f6c5f5f6db3de92d5f492df141b81055 260 Hamap MF_00443 Thiazole synthase [thiG]. 5 259 41.918 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 WS_RS04575 f6c5f5f6db3de92d5f492df141b81055 260 SUPERFAMILY SSF110399 4 245 2.88E-83 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 WS_RS02675 2cff14d848908f2677bf4e966e4514bf 134 Pfam PF01475 Ferric uptake regulator family 9 124 2.9E-29 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 WS_RS02675 2cff14d848908f2677bf4e966e4514bf 134 SUPERFAMILY SSF46785 2 130 1.54E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS02675 2cff14d848908f2677bf4e966e4514bf 134 Gene3D G3DSA:1.10.10.10 2 80 9.9E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS10590 4b6ce05930760f41cad94c8b5d726de1 558 Pfam PF02690 Na+/Pi-cotransporter 181 262 2.2E-11 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 WS_RS10590 4b6ce05930760f41cad94c8b5d726de1 558 Pfam PF02690 Na+/Pi-cotransporter 16 157 4.0E-37 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 WS_RS07045 042e325cde36443ccc6386a43f0cadff 396 Pfam PF01979 Amidohydrolase family 241 389 2.2E-8 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 WS_RS07045 042e325cde36443ccc6386a43f0cadff 396 Gene3D G3DSA:3.20.20.140 35 352 6.8E-61 T 11-11-2016 WS_RS07045 042e325cde36443ccc6386a43f0cadff 396 Gene3D G3DSA:2.30.40.10 2 34 7.5E-8 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 WS_RS07045 042e325cde36443ccc6386a43f0cadff 396 Gene3D G3DSA:2.30.40.10 353 393 7.5E-8 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 WS_RS07045 042e325cde36443ccc6386a43f0cadff 396 SUPERFAMILY SSF51338 342 393 3.24E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 WS_RS07045 042e325cde36443ccc6386a43f0cadff 396 SUPERFAMILY SSF51338 1 33 3.24E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 WS_RS07045 042e325cde36443ccc6386a43f0cadff 396 SUPERFAMILY SSF51556 35 343 1.3E-59 T 11-11-2016 IPR032466 Metal-dependent hydrolase WS_RS04715 1d3f5699743b3f2912df43a84c2035a0 280 SUPERFAMILY SSF161098 69 255 1.09E-12 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04715 1d3f5699743b3f2912df43a84c2035a0 280 Gene3D G3DSA:1.10.3720.10 68 270 1.8E-10 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04715 1d3f5699743b3f2912df43a84c2035a0 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 272 5.6E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS08375 64230a9c10e7046aa30c05461a56451b 435 SUPERFAMILY SSF56935 260 435 1.37E-8 T 11-11-2016 WS_RS08375 64230a9c10e7046aa30c05461a56451b 435 Pfam PF05538 Campylobacter major outer membrane protein 1 435 4.2E-81 T 11-11-2016 IPR008439 Campylobacter major outer membrane WS_RS01725 fcb55ad091b9aecf1edcc7d1201e9649 238 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 34 230 1.5E-46 T 11-11-2016 WS_RS07640 38893db3c4fc6fa9e661fd370ee56133 514 Gene3D G3DSA:3.40.50.300 380 483 3.7E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07640 38893db3c4fc6fa9e661fd370ee56133 514 Gene3D G3DSA:3.40.50.300 316 317 3.7E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07640 38893db3c4fc6fa9e661fd370ee56133 514 Gene3D G3DSA:3.40.50.300 6 189 3.7E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07640 38893db3c4fc6fa9e661fd370ee56133 514 Pfam PF02463 RecF/RecN/SMC N terminal domain 6 474 2.5E-14 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal WS_RS07640 38893db3c4fc6fa9e661fd370ee56133 514 PIRSF PIRSF003128 5 514 4.2E-103 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 WS_RS07640 38893db3c4fc6fa9e661fd370ee56133 514 SUPERFAMILY SSF52540 275 477 1.4E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07640 38893db3c4fc6fa9e661fd370ee56133 514 SUPERFAMILY SSF52540 6 191 1.4E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09115 d531bdb628c8ed05702d6e01089920a1 297 PIRSF PIRSF016788 1 297 7.7E-113 T 11-11-2016 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted WS_RS09115 d531bdb628c8ed05702d6e01089920a1 297 Pfam PF00072 Response regulator receiver domain 3 105 2.6E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09115 d531bdb628c8ed05702d6e01089920a1 297 Gene3D G3DSA:3.40.50.2300 1 116 1.0E-15 T 11-11-2016 WS_RS09115 d531bdb628c8ed05702d6e01089920a1 297 SMART SM00448 1 105 1.3E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS09115 d531bdb628c8ed05702d6e01089920a1 297 Gene3D G3DSA:1.10.10.60 258 295 1.2E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 WS_RS09115 d531bdb628c8ed05702d6e01089920a1 297 SUPERFAMILY SSF52172 1 140 5.41E-20 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10060 282824fbbc63898f02c1ad957737a7c0 186 SUPERFAMILY SSF53323 1 186 1.7E-42 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 WS_RS10060 282824fbbc63898f02c1ad957737a7c0 186 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 183 3.4E-29 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 WS_RS10060 282824fbbc63898f02c1ad957737a7c0 186 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 186 2.6E-47 T 11-11-2016 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 WS_RS10060 282824fbbc63898f02c1ad957737a7c0 186 Gene3D G3DSA:3.40.920.10 1 186 7.8E-47 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 WS_RS08715 455940079c5ae22cf5b0a13428752e91 68 Pfam PF14899 Domain of unknown function (DUF4492) 4 65 1.6E-26 T 11-11-2016 IPR027853 Protein of unknown function DUF4492 WS_RS08965 889a2d298c42d65a712375628038ddc2 300 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 290 1.6E-60 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 WS_RS08965 889a2d298c42d65a712375628038ddc2 300 PIRSF PIRSF026649 1 298 5.2E-63 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 WS_RS08790 1ca44790cf995278394bc9a6762d81b5 162 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 162 1.7E-52 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 WS_RS08790 1ca44790cf995278394bc9a6762d81b5 162 Pfam PF00436 Single-strand binding protein family 3 105 6.6E-35 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 WS_RS08790 1ca44790cf995278394bc9a6762d81b5 162 PIRSF PIRSF002070 1 153 1.3E-32 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 WS_RS08790 1ca44790cf995278394bc9a6762d81b5 162 Gene3D G3DSA:2.40.50.140 1 162 2.2E-45 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08790 1ca44790cf995278394bc9a6762d81b5 162 SUPERFAMILY SSF50249 1 162 1.13E-49 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08790 1ca44790cf995278394bc9a6762d81b5 162 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 34.431 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 WS_RS01200 59ff828ccb6c8e04d9a0e9222322841e 366 Gene3D G3DSA:3.20.20.70 12 360 1.7E-46 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01200 59ff828ccb6c8e04d9a0e9222322841e 366 SUPERFAMILY SSF51412 11 297 3.51E-46 T 11-11-2016 WS_RS01200 59ff828ccb6c8e04d9a0e9222322841e 366 SUPERFAMILY SSF51412 333 366 3.51E-46 T 11-11-2016 WS_RS01200 59ff828ccb6c8e04d9a0e9222322841e 366 Pfam PF03060 Nitronate monooxygenase 11 365 1.2E-92 T 11-11-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 WS_RS09530 be4a7e5bf415ceff14a82ebbe559fd7a 194 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 3 189 2.2E-55 T 11-11-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated WS_RS09530 be4a7e5bf415ceff14a82ebbe559fd7a 194 SUPERFAMILY SSF53448 4 192 2.93E-33 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09530 be4a7e5bf415ceff14a82ebbe559fd7a 194 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 42 158 3.0E-30 T 11-11-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated WS_RS09530 be4a7e5bf415ceff14a82ebbe559fd7a 194 Gene3D G3DSA:3.90.550.10 3 178 3.0E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS01345 3a988d6bfcdaac878d9abe445ad923c6 97 Pfam PF02325 YGGT family 16 85 3.7E-20 T 11-11-2016 IPR003425 CCB3/YggT GO:0016020 WS_RS09140 9db043d394382fb5474333e365787d5c 216 SUPERFAMILY SSF161098 8 203 2.09E-46 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS09140 9db043d394382fb5474333e365787d5c 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 215 2.2E-24 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS09140 9db043d394382fb5474333e365787d5c 216 Gene3D G3DSA:1.10.3720.10 9 215 7.3E-43 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS06875 92254c15f3832682027cec229f419191 304 SUPERFAMILY SSF51730 7 299 1.61E-46 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like WS_RS06875 92254c15f3832682027cec229f419191 304 Pfam PF02219 Methylenetetrahydrofolate reductase 10 299 6.1E-25 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 WS_RS06875 92254c15f3832682027cec229f419191 304 Gene3D G3DSA:3.20.20.220 3 299 4.3E-39 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like WS_RS05665 a38c249805c07273e896eabe40550c74 177 SUPERFAMILY SSF69118 8 176 5.28E-35 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 WS_RS05665 a38c249805c07273e896eabe40550c74 177 Gene3D G3DSA:1.20.1290.10 60 173 1.4E-20 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 WS_RS05220 55537e2cddbee4d110fc75022aac1042 351 Pfam PF13154 Protein of unknown function (DUF3991) 93 176 3.8E-17 T 11-11-2016 IPR025054 Domain of unknown function DUF3991 WS_RS05220 55537e2cddbee4d110fc75022aac1042 351 Gene3D G3DSA:3.40.1360.10 182 280 5.4E-7 T 11-11-2016 WS_RS05220 55537e2cddbee4d110fc75022aac1042 351 Pfam PF13155 Toprim-like 187 277 1.3E-12 T 11-11-2016 WS_RS03280 6af04954629d961739fab0bda58817c7 345 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 323 6.9E-34 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 WS_RS06830 62ce242efde9a2f28cb764388d398eb4 529 Gene3D G3DSA:3.40.190.10 189 311 8.0E-14 T 11-11-2016 WS_RS06830 62ce242efde9a2f28cb764388d398eb4 529 Gene3D G3DSA:3.90.76.10 52 188 1.7E-16 T 11-11-2016 WS_RS06830 62ce242efde9a2f28cb764388d398eb4 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 324 2.1E-33 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain WS_RS06830 62ce242efde9a2f28cb764388d398eb4 529 SUPERFAMILY SSF53850 50 499 1.27E-50 T 11-11-2016 WS_RS09015 701694cd6d7ffdd1a611e2a437c279f6 480 Gene3D G3DSA:3.40.50.2300 374 477 1.1E-6 T 11-11-2016 WS_RS09015 701694cd6d7ffdd1a611e2a437c279f6 480 SUPERFAMILY SSF52172 357 480 9.81E-9 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS07250 4e4b0e64b9990f82d04f1ea92882d285 299 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 281 2.8E-90 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 WS_RS07250 4e4b0e64b9990f82d04f1ea92882d285 299 Pfam PF05681 Fumarate hydratase (Fumerase) 16 279 1.7E-72 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 WS_RS03300 09d9a6dbcee887f85ca43a24fa9d2393 333 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 13 326 4.5E-107 T 11-11-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 WS_RS03300 09d9a6dbcee887f85ca43a24fa9d2393 333 SUPERFAMILY SSF51735 6 327 2.52E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS03300 09d9a6dbcee887f85ca43a24fa9d2393 333 Gene3D G3DSA:3.40.50.720 7 194 5.1E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS03300 09d9a6dbcee887f85ca43a24fa9d2393 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 257 4.9E-44 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 WS_RS03300 09d9a6dbcee887f85ca43a24fa9d2393 333 Gene3D G3DSA:3.90.25.10 195 309 3.2E-33 T 11-11-2016 WS_RS01775 dbbb933e500b0063dc723dea16e1636f 287 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 10 284 2.7E-89 T 11-11-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related WS_RS01775 dbbb933e500b0063dc723dea16e1636f 287 Pfam PF01040 UbiA prenyltransferase family 26 267 3.7E-47 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 WS_RS06080 3731b1353a5cc9935aa7bf8b90f13bb1 248 SUPERFAMILY SSF111369 29 242 2.22E-14 T 11-11-2016 WS_RS06080 3731b1353a5cc9935aa7bf8b90f13bb1 248 Pfam PF13533 Biotin-lipoyl like 36 81 8.2E-6 T 11-11-2016 WS_RS06080 3731b1353a5cc9935aa7bf8b90f13bb1 248 Pfam PF13437 HlyD family secretion protein 143 233 1.6E-6 T 11-11-2016 WS_RS06080 3731b1353a5cc9935aa7bf8b90f13bb1 248 Gene3D G3DSA:2.40.50.100 140 168 4.9E-10 T 11-11-2016 WS_RS06080 3731b1353a5cc9935aa7bf8b90f13bb1 248 Gene3D G3DSA:2.40.50.100 35 67 4.9E-10 T 11-11-2016 WS_RS09600 d26e39ca798e81f22db788b7e74b8b2d 352 ProSitePatterns PS01348 MraY family signature 2. 181 192 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 WS_RS09600 d26e39ca798e81f22db788b7e74b8b2d 352 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 20 350 22.788 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 WS_RS09600 d26e39ca798e81f22db788b7e74b8b2d 352 ProSitePatterns PS01347 MraY family signature 1. 63 75 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 WS_RS09600 d26e39ca798e81f22db788b7e74b8b2d 352 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 63 75 2.1E-5 T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 WS_RS09600 d26e39ca798e81f22db788b7e74b8b2d 352 Pfam PF00953 Glycosyl transferase family 4 95 276 4.6E-33 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 WS_RS09600 d26e39ca798e81f22db788b7e74b8b2d 352 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 33 352 4.6E-123 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 WS_RS07245 373b85bf465be884bbfb551fdba210f4 204 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 177 1.1E-61 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS07245 373b85bf465be884bbfb551fdba210f4 204 Gene3D G3DSA:3.20.130.10 1 175 6.3E-63 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS07245 373b85bf465be884bbfb551fdba210f4 204 Pfam PF05683 Fumarase C-terminus 9 176 1.2E-38 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS07245 373b85bf465be884bbfb551fdba210f4 204 SUPERFAMILY SSF117457 3 175 5.75E-53 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 WS_RS07975 59753e7933af66b1a2d2040f081a2968 131 Pfam PF00411 Ribosomal protein S11 20 130 4.5E-42 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 WS_RS07975 59753e7933af66b1a2d2040f081a2968 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 128 4.2E-52 T 11-11-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS07975 59753e7933af66b1a2d2040f081a2968 131 Gene3D G3DSA:3.30.420.80 7 131 1.1E-49 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 WS_RS07975 59753e7933af66b1a2d2040f081a2968 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 131 32.014 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 WS_RS07975 59753e7933af66b1a2d2040f081a2968 131 SUPERFAMILY SSF53137 14 131 2.22E-43 T 11-11-2016 WS_RS07975 59753e7933af66b1a2d2040f081a2968 131 PIRSF PIRSF002131 1 131 2.7E-47 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 WS_RS06685 51e9dabbf33e689cab470f80fe388b22 99 Pfam PF04891 NifQ 2 93 6.4E-19 T 11-11-2016 IPR006975 NifQ GO:0009399|GO:0030151 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 279 37.55 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 Gene3D G3DSA:3.90.226.10 21 278 2.5E-68 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 7.8E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 7.8E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 7.8E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 7.8E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 7.8E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 SUPERFAMILY SSF52096 24 279 8.19E-79 T 11-11-2016 IPR029045 ClpP/crotonase-like domain WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 277 7.4E-125 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 WS_RS00785 2696291838975ba58d3d6fb0f6475768 289 Pfam PF01039 Carboxyl transferase domain 90 238 1.3E-19 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 WS_RS05025 f3df03e0ef83054aea41bae1467d1526 148 Pfam PF01475 Ferric uptake regulator family 13 127 6.3E-14 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 WS_RS05025 f3df03e0ef83054aea41bae1467d1526 148 Gene3D G3DSA:1.10.10.10 4 82 2.2E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS05025 f3df03e0ef83054aea41bae1467d1526 148 SUPERFAMILY SSF46785 5 136 2.42E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS01100 8bf2fb0f04c98678c854f8183a05d2d5 195 Gene3D G3DSA:3.20.20.70 1 193 1.6E-53 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01100 8bf2fb0f04c98678c854f8183a05d2d5 195 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 195 31.485 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 WS_RS01100 8bf2fb0f04c98678c854f8183a05d2d5 195 SUPERFAMILY SSF51366 1 192 1.73E-46 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 WS_RS01100 8bf2fb0f04c98678c854f8183a05d2d5 195 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 190 1.3E-33 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 WS_RS06235 4fb8cb06f8838b76e58b618dd97a1e2d 366 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 350 8.4E-115 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 WS_RS06235 4fb8cb06f8838b76e58b618dd97a1e2d 366 PIRSF PIRSF004640 4 363 9.5E-140 T 11-11-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 WS_RS06235 4fb8cb06f8838b76e58b618dd97a1e2d 366 Gene3D G3DSA:3.20.20.120 70 137 1.0E-6 T 11-11-2016 IPR029065 Enolase C-terminal domain-like WS_RS06235 4fb8cb06f8838b76e58b618dd97a1e2d 366 SUPERFAMILY SSF56014 267 350 2.22E-8 T 11-11-2016 WS_RS06235 4fb8cb06f8838b76e58b618dd97a1e2d 366 SUPERFAMILY SSF51717 36 214 1.65E-8 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 WS_RS06235 4fb8cb06f8838b76e58b618dd97a1e2d 366 Pfam PF04551 GcpE protein 14 353 8.2E-126 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 WS_RS06235 4fb8cb06f8838b76e58b618dd97a1e2d 366 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 357 34.084 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 WS_RS08425 b5f9351f5422548d6051e615e4c5893c 248 PIRSF PIRSF004976 2 246 1.9E-67 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 WS_RS08425 b5f9351f5422548d6051e615e4c5893c 248 Pfam PF01171 PP-loop family 28 189 1.0E-19 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 WS_RS08425 b5f9351f5422548d6051e615e4c5893c 248 Gene3D G3DSA:3.40.50.620 21 194 3.3E-22 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS08425 b5f9351f5422548d6051e615e4c5893c 248 SUPERFAMILY SSF52402 14 239 2.21E-51 T 11-11-2016 WS_RS08960 f8f6b61793c2c81b9eb93950e777a13f 250 Pfam PF00535 Glycosyl transferase family 2 15 112 5.5E-12 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 WS_RS08960 f8f6b61793c2c81b9eb93950e777a13f 250 SUPERFAMILY SSF53448 1 138 2.33E-18 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS08960 f8f6b61793c2c81b9eb93950e777a13f 250 Gene3D G3DSA:3.90.550.10 10 183 1.4E-11 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS04355 87cb4e728f667a235d6d2a4b40ed6e2b 260 Gene3D G3DSA:1.10.3720.10 60 242 2.5E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04355 87cb4e728f667a235d6d2a4b40ed6e2b 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 241 5.5E-10 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04355 87cb4e728f667a235d6d2a4b40ed6e2b 260 SUPERFAMILY SSF161098 60 245 1.44E-22 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS03025 96b6c5d4d48a1584c8d4f63e3ef10540 125 SMART SM00448 1 116 3.8E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03025 96b6c5d4d48a1584c8d4f63e3ef10540 125 Gene3D G3DSA:3.40.50.2300 2 121 3.8E-35 T 11-11-2016 WS_RS03025 96b6c5d4d48a1584c8d4f63e3ef10540 125 Pfam PF00072 Response regulator receiver domain 4 116 2.8E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03025 96b6c5d4d48a1584c8d4f63e3ef10540 125 SUPERFAMILY SSF52172 2 121 1.99E-34 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS08195 2ce5226e7df68844a9da68a01ff921ff 227 Pfam PF02535 ZIP Zinc transporter 67 218 1.7E-27 T 11-11-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 WS_RS08760 98982c5395c9b82378051b02a6680a39 211 Pfam PF09335 SNARE associated Golgi protein 49 169 7.5E-14 T 11-11-2016 IPR032816 SNARE associated Golgi protein WS_RS06210 bcd9052f504e5bed639587ad14e04b03 103 SUPERFAMILY SSF57662 8 101 8.63E-29 T 11-11-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 WS_RS06210 bcd9052f504e5bed639587ad14e04b03 103 Gene3D G3DSA:3.90.460.10 2 98 4.8E-26 T 11-11-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 WS_RS06210 bcd9052f504e5bed639587ad14e04b03 103 Pfam PF02943 Ferredoxin thioredoxin reductase catalytic beta chain 9 97 6.6E-29 T 11-11-2016 IPR004209 Ferredoxin thioredoxin reductase catalytic beta subunit GO:0016730|GO:0055114 WS_RS08175 3732ae42c31a287fc59773aa6e71fa8e 79 Gene3D G3DSA:1.10.260.40 5 42 3.0E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 WS_RS08175 3732ae42c31a287fc59773aa6e71fa8e 79 Pfam PF01381 Helix-turn-helix 7 34 3.3E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 WS_RS08175 3732ae42c31a287fc59773aa6e71fa8e 79 SUPERFAMILY SSF47413 6 41 1.45E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 WS_RS02470 d6abb2c4b8551d743ff28cada4e6382e 123 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 6.1E-51 T 11-11-2016 IPR006056 RidA family WS_RS02470 d6abb2c4b8551d743ff28cada4e6382e 123 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 11-11-2016 IPR019897 RidA, conserved site WS_RS02470 d6abb2c4b8551d743ff28cada4e6382e 123 SUPERFAMILY SSF55298 2 123 2.83E-47 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like WS_RS02470 d6abb2c4b8551d743ff28cada4e6382e 123 Gene3D G3DSA:3.30.1330.40 3 122 1.0E-49 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like WS_RS02470 d6abb2c4b8551d743ff28cada4e6382e 123 Pfam PF01042 Endoribonuclease L-PSP 7 122 5.9E-43 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family WS_RS02405 57dbe2d96c3151e02bd7fdd309486859 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 2.1E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02405 57dbe2d96c3151e02bd7fdd309486859 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.1E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02405 57dbe2d96c3151e02bd7fdd309486859 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 159 183 2.1E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02405 57dbe2d96c3151e02bd7fdd309486859 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.1E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02405 57dbe2d96c3151e02bd7fdd309486859 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 129 148 2.1E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02405 57dbe2d96c3151e02bd7fdd309486859 506 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 482 4.5E-177 T 11-11-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02405 57dbe2d96c3151e02bd7fdd309486859 506 Pfam PF00361 Proton-conducting membrane transporter 123 415 2.5E-69 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08635 3b23f311e2027ad779447ab8971436c7 179 Pfam PF12838 4Fe-4S dicluster domain 40 89 9.8E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS08635 3b23f311e2027ad779447ab8971436c7 179 SUPERFAMILY SSF54862 18 101 1.36E-19 T 11-11-2016 WS_RS08635 3b23f311e2027ad779447ab8971436c7 179 Gene3D G3DSA:3.30.70.20 9 80 4.5E-18 T 11-11-2016 WS_RS08635 3b23f311e2027ad779447ab8971436c7 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS08635 3b23f311e2027ad779447ab8971436c7 179 Gene3D G3DSA:3.30.70.20 81 123 8.1E-6 T 11-11-2016 WS_RS08635 3b23f311e2027ad779447ab8971436c7 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS05690 d08ce3c7319b8be35305653967a00950 437 Gene3D G3DSA:3.90.1150.10 300 436 6.5E-27 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS05690 d08ce3c7319b8be35305653967a00950 437 SUPERFAMILY SSF53383 25 436 1.57E-69 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS05690 d08ce3c7319b8be35305653967a00950 437 Pfam PF00266 Aminotransferase class-V 137 427 1.5E-36 T 11-11-2016 IPR000192 Aminotransferase class V domain WS_RS05690 d08ce3c7319b8be35305653967a00950 437 Gene3D G3DSA:3.40.640.10 46 299 2.7E-38 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS01005 ed602a60495e8205d4e476d1ccabd7ae 226 Pfam PF09335 SNARE associated Golgi protein 71 188 6.8E-27 T 11-11-2016 IPR032816 SNARE associated Golgi protein WS_RS01115 9c291b5626278404c4162694628ae3de 401 Pfam PF01435 Peptidase family M48 196 395 1.5E-43 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 WS_RS01115 9c291b5626278404c4162694628ae3de 401 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 36 193 1.5E-34 T 11-11-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 WS_RS01115 9c291b5626278404c4162694628ae3de 401 Gene3D G3DSA:3.30.2010.10 190 281 7.4E-18 T 11-11-2016 WS_RS01890 4ce2809ddf9177cb29829ee9842043a2 225 SUPERFAMILY SSF54862 40 219 6.07E-54 T 11-11-2016 WS_RS01890 4ce2809ddf9177cb29829ee9842043a2 225 Gene3D G3DSA:3.30.70.20 112 147 1.9E-20 T 11-11-2016 WS_RS01890 4ce2809ddf9177cb29829ee9842043a2 225 Pfam PF13247 4Fe-4S dicluster domain 91 185 4.5E-20 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain WS_RS01890 4ce2809ddf9177cb29829ee9842043a2 225 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 129 140 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site WS_RS01890 4ce2809ddf9177cb29829ee9842043a2 225 Gene3D G3DSA:3.30.70.20 42 111 2.0E-16 T 11-11-2016 WS_RS01890 4ce2809ddf9177cb29829ee9842043a2 225 Gene3D G3DSA:3.30.70.20 148 202 4.5E-14 T 11-11-2016 WS_RS00040 99dcd91cff0bfb006741e1f1c0985f4d 285 Pfam PF00582 Universal stress protein family 8 137 3.5E-23 T 11-11-2016 IPR006016 UspA GO:0006950 WS_RS00040 99dcd91cff0bfb006741e1f1c0985f4d 285 SUPERFAMILY SSF52402 8 139 6.58E-25 T 11-11-2016 WS_RS00040 99dcd91cff0bfb006741e1f1c0985f4d 285 PRINTS PR01438 Universal stress protein signature 115 137 6.3E-6 T 11-11-2016 IPR006015 Universal stress protein A WS_RS00040 99dcd91cff0bfb006741e1f1c0985f4d 285 PRINTS PR01438 Universal stress protein signature 5 23 6.3E-6 T 11-11-2016 IPR006015 Universal stress protein A WS_RS00040 99dcd91cff0bfb006741e1f1c0985f4d 285 Gene3D G3DSA:3.40.50.620 8 135 1.6E-23 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00040 99dcd91cff0bfb006741e1f1c0985f4d 285 SUPERFAMILY SSF52402 144 281 1.84E-8 T 11-11-2016 WS_RS00040 99dcd91cff0bfb006741e1f1c0985f4d 285 Gene3D G3DSA:3.40.50.620 136 280 5.1E-9 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS01995 8c4202aef2b0cb7b7a8bb731dd621c5f 198 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 15 160 5.9E-15 T 11-11-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related WS_RS01995 8c4202aef2b0cb7b7a8bb731dd621c5f 198 Gene3D G3DSA:2.30.110.10 1 162 1.0E-33 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 WS_RS01995 8c4202aef2b0cb7b7a8bb731dd621c5f 198 SUPERFAMILY SSF50475 1 171 4.75E-29 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 WS_RS08470 d57effcfcf4fb996641bc3e61dcf7c2c 291 Gene3D G3DSA:3.40.50.300 23 226 9.3E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08470 d57effcfcf4fb996641bc3e61dcf7c2c 291 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 WS_RS08470 d57effcfcf4fb996641bc3e61dcf7c2c 291 SUPERFAMILY SSF52540 15 226 8.42E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08470 d57effcfcf4fb996641bc3e61dcf7c2c 291 Pfam PF00005 ABC transporter 21 161 1.0E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 WS_RS08470 d57effcfcf4fb996641bc3e61dcf7c2c 291 SMART SM00382 27 211 5.9E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS08770 82ede127965b09a2485187e7969d1b06 531 Pfam PF01384 Phosphate transporter family 65 517 4.2E-116 T 11-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 WS_RS01475 75ebbb1b8af689beef2d6f013ebe9d4a 381 Pfam PF13584 Oxygen tolerance 17 348 5.8E-26 T 11-11-2016 IPR025738 Aerotolerance-related protein BatD WS_RS02800 069a8c81c965eda9a0752032e60cfca5 173 SUPERFAMILY SSF50199 24 158 1.57E-12 T 11-11-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold WS_RS02800 069a8c81c965eda9a0752032e60cfca5 173 Gene3D G3DSA:2.40.50.90 94 159 3.5E-5 T 11-11-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold WS_RS02800 069a8c81c965eda9a0752032e60cfca5 173 Pfam PF00565 Staphylococcal nuclease homologue 106 157 4.8E-6 T 11-11-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold WS_RS03320 88f9e64cf34716ad7872b0c5903fbaa1 702 Gene3D G3DSA:3.20.70.20 127 275 2.6E-185 T 11-11-2016 WS_RS03320 88f9e64cf34716ad7872b0c5903fbaa1 702 Gene3D G3DSA:3.20.70.20 322 692 2.6E-185 T 11-11-2016 WS_RS03320 88f9e64cf34716ad7872b0c5903fbaa1 702 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 691 2.1E-165 T 11-11-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 WS_RS03320 88f9e64cf34716ad7872b0c5903fbaa1 702 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 691 1.5E-125 T 11-11-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 WS_RS03320 88f9e64cf34716ad7872b0c5903fbaa1 702 SUPERFAMILY SSF51998 122 697 1.01E-142 T 11-11-2016 WS_RS03320 88f9e64cf34716ad7872b0c5903fbaa1 702 Pfam PF03477 ATP cone domain 4 86 3.3E-12 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 WS_RS06220 1d4880fea1a588709a14a2e35f7b467f 143 Gene3D G3DSA:2.60.40.790 5 142 5.9E-41 T 11-11-2016 IPR008978 HSP20-like chaperone WS_RS06220 1d4880fea1a588709a14a2e35f7b467f 143 Pfam PF00011 Hsp20/alpha crystallin family 45 142 3.5E-26 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain WS_RS06220 1d4880fea1a588709a14a2e35f7b467f 143 SUPERFAMILY SSF49764 27 142 1.92E-38 T 11-11-2016 IPR008978 HSP20-like chaperone WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 Gene3D G3DSA:3.40.190.10 181 257 5.7E-8 T 11-11-2016 WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 55 6.9E-13 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 Gene3D G3DSA:1.10.10.10 1 84 5.1E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 Gene3D G3DSA:3.40.190.10 89 180 7.3E-20 T 11-11-2016 WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.2E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.2E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.2E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 Pfam PF03466 LysR substrate binding domain 87 286 3.0E-33 T 11-11-2016 IPR005119 LysR, substrate-binding WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 SUPERFAMILY SSF46785 1 109 3.56E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS10380 c5c51317070ee6316b3b4af9ee005139 294 SUPERFAMILY SSF53850 88 287 4.59E-31 T 11-11-2016 WS_RS01340 fc1bde8ac74fd2b23ab9978375b4796e 538 Pfam PF01464 Transglycosylase SLT domain 384 477 5.1E-20 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 WS_RS01340 fc1bde8ac74fd2b23ab9978375b4796e 538 SUPERFAMILY SSF53955 377 530 4.82E-34 T 11-11-2016 IPR023346 Lysozyme-like domain WS_RS01340 fc1bde8ac74fd2b23ab9978375b4796e 538 Gene3D G3DSA:1.10.530.10 373 531 1.8E-31 T 11-11-2016 WS_RS10730 fecf2074e335a9b061dd0a63f7c5b6c5 171 Gene3D G3DSA:3.30.420.130 2 107 5.7E-21 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS10730 fecf2074e335a9b061dd0a63f7c5b6c5 171 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 96 2.6E-15 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS10730 fecf2074e335a9b061dd0a63f7c5b6c5 171 SUPERFAMILY SSF53146 2 111 3.53E-19 T 11-11-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis WS_RS08735 1387df86e3fe778abcb9919fb7561eff 543 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 471 3.4E-55 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS08735 1387df86e3fe778abcb9919fb7561eff 543 Pfam PF00474 Sodium:solute symporter family 33 471 1.3E-55 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 WS_RS01250 a56228b7e96f45e77c25e4d0a09b54ad 356 Pfam PF00534 Glycosyl transferases group 1 173 326 1.4E-36 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 WS_RS01250 a56228b7e96f45e77c25e4d0a09b54ad 356 Gene3D G3DSA:3.40.50.2000 145 320 3.0E-35 T 11-11-2016 WS_RS01250 a56228b7e96f45e77c25e4d0a09b54ad 356 SUPERFAMILY SSF53756 4 355 5.93E-71 T 11-11-2016 WS_RS01250 a56228b7e96f45e77c25e4d0a09b54ad 356 Pfam PF13439 Glycosyltransferase Family 4 45 160 8.4E-10 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 162 3.7E-15 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 Gene3D G3DSA:1.10.1670.10 119 204 6.3E-30 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 Pfam PF00633 Helix-hairpin-helix motif 99 124 3.1E-7 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 SMART SM00478 38 181 4.1E-36 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 SUPERFAMILY SSF55811 216 314 4.19E-6 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 Gene3D G3DSA:1.10.340.30 21 118 2.6E-33 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 183 199 - T 11-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 WS_RS03580 99afd06af78821b5cd10c39184a8b246 320 SUPERFAMILY SSF48150 3 201 1.51E-58 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 WS_RS04670 f570e89a65dc71e39a1ae4451846fb60 177 Gene3D G3DSA:1.10.3820.10 6 161 3.6E-24 T 11-11-2016 WS_RS04670 f570e89a65dc71e39a1ae4451846fb60 177 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 13 158 2.0E-53 T 11-11-2016 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 WS_RS04670 f570e89a65dc71e39a1ae4451846fb60 177 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 10 160 4.7E-18 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal WS_RS04670 f570e89a65dc71e39a1ae4451846fb60 177 SUPERFAMILY SSF48695 10 158 5.87E-26 T 11-11-2016 IPR011031 Multihaem cytochrome WS_RS04455 715eef92152bb61bd54b50e63caa7e65 383 SMART SM00283 100 379 5.2E-23 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04455 715eef92152bb61bd54b50e63caa7e65 383 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 179 373 6.1E-35 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04455 715eef92152bb61bd54b50e63caa7e65 383 SUPERFAMILY SSF58104 75 376 2.62E-48 T 11-11-2016 WS_RS04455 715eef92152bb61bd54b50e63caa7e65 383 Gene3D G3DSA:1.10.287.950 143 345 4.1E-43 T 11-11-2016 WS_RS08840 2a13d13dd76dcc17c493f3065a8496e4 709 SUPERFAMILY SSF50978 80 304 2.34E-34 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 WS_RS08840 2a13d13dd76dcc17c493f3065a8496e4 709 Gene3D G3DSA:2.130.10.10 87 296 1.2E-29 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS08840 2a13d13dd76dcc17c493f3065a8496e4 709 Gene3D G3DSA:2.130.10.10 14 55 1.2E-29 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 WS_RS08840 2a13d13dd76dcc17c493f3065a8496e4 709 SMART SM00320 131 170 0.47 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS08840 2a13d13dd76dcc17c493f3065a8496e4 709 SMART SM00320 256 293 13.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS08840 2a13d13dd76dcc17c493f3065a8496e4 709 SMART SM00320 89 128 4.7E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS08840 2a13d13dd76dcc17c493f3065a8496e4 709 Pfam PF00400 WD domain, G-beta repeat 98 127 9.8E-5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 WS_RS01160 cf2065160468dd048a500e9187830cbc 485 Pfam PF13145 PPIC-type PPIASE domain 240 359 5.2E-20 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 WS_RS01160 cf2065160468dd048a500e9187830cbc 485 Gene3D G3DSA:3.10.50.40 319 369 1.5E-5 T 11-11-2016 WS_RS01160 cf2065160468dd048a500e9187830cbc 485 Pfam PF13624 SurA N-terminal domain 1 163 2.4E-49 T 11-11-2016 WS_RS01160 cf2065160468dd048a500e9187830cbc 485 SUPERFAMILY SSF109998 40 167 6.28E-25 T 11-11-2016 IPR027304 Trigger factor/SurA domain WS_RS01160 cf2065160468dd048a500e9187830cbc 485 SUPERFAMILY SSF109998 197 232 6.28E-25 T 11-11-2016 IPR027304 Trigger factor/SurA domain WS_RS08645 a5dca0f2d1fe861097d1001f66214f5d 489 Pfam PF00361 Proton-conducting membrane transporter 126 418 2.3E-55 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08645 a5dca0f2d1fe861097d1001f66214f5d 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 9.2E-7 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08645 a5dca0f2d1fe861097d1001f66214f5d 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 9.2E-7 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08645 a5dca0f2d1fe861097d1001f66214f5d 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 9.2E-7 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS01535 10a058f14b0b39c53e6bcc9dfc254e1a 234 SUPERFAMILY SSF53335 6 164 3.03E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS01535 10a058f14b0b39c53e6bcc9dfc254e1a 234 Pfam PF13649 Methyltransferase domain 43 120 1.3E-9 T 11-11-2016 WS_RS01535 10a058f14b0b39c53e6bcc9dfc254e1a 234 Gene3D G3DSA:3.40.50.150 4 151 1.8E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS00895 964fa60347293dabe896200ad5dad034 363 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 213 358 1.3E-49 T 11-11-2016 IPR008136 CinA, C-terminal WS_RS00895 964fa60347293dabe896200ad5dad034 363 Gene3D G3DSA:3.90.950.20 205 360 1.5E-54 T 11-11-2016 IPR008136 CinA, C-terminal WS_RS00895 964fa60347293dabe896200ad5dad034 363 SUPERFAMILY SSF142433 205 360 5.75E-51 T 11-11-2016 IPR008136 CinA, C-terminal WS_RS00895 964fa60347293dabe896200ad5dad034 363 Pfam PF02464 Competence-damaged protein 206 359 2.3E-55 T 11-11-2016 IPR008136 CinA, C-terminal WS_RS09740 c3b6661bd87664a90ded4f982a07d2e6 200 Gene3D G3DSA:3.40.50.300 6 191 5.3E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09740 c3b6661bd87664a90ded4f982a07d2e6 200 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 170 3.1E-50 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 WS_RS09740 c3b6661bd87664a90ded4f982a07d2e6 200 SUPERFAMILY SSF52540 5 188 8.67E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09740 c3b6661bd87664a90ded4f982a07d2e6 200 Pfam PF01926 50S ribosome-binding GTPase 26 154 3.9E-18 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS09740 c3b6661bd87664a90ded4f982a07d2e6 200 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 25.566 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 WS_RS03485 f27a7e2bcf0626327c61e4e195813dfd 212 Pfam PF00881 Nitroreductase family 9 192 3.2E-25 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 WS_RS03485 f27a7e2bcf0626327c61e4e195813dfd 212 Gene3D G3DSA:3.40.109.10 1 211 1.4E-62 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 WS_RS03485 f27a7e2bcf0626327c61e4e195813dfd 212 SUPERFAMILY SSF55469 3 211 6.54E-50 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 WS_RS10325 d5c5a2d66f7a932962cd152e44bd82a3 385 SUPERFAMILY SSF53756 49 359 1.0E-15 T 11-11-2016 WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 Pfam PF04715 Anthranilate synthase component I, N terminal region 11 161 5.3E-25 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 Pfam PF00425 chorismate binding enzyme 205 458 5.4E-88 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 Gene3D G3DSA:3.60.120.10 5 467 3.9E-140 T 11-11-2016 IPR005801 ADC synthase GO:0009058 WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 PRINTS PR00095 Anthranilate synthase component I signature 306 319 4.1E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 PRINTS PR00095 Anthranilate synthase component I signature 415 429 4.1E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 PRINTS PR00095 Anthranilate synthase component I signature 320 333 4.1E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 PRINTS PR00095 Anthranilate synthase component I signature 400 414 4.1E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 WS_RS00420 83403dcc0f875ff1d6c7148ee96f9248 472 SUPERFAMILY SSF56322 5 467 2.88E-130 T 11-11-2016 IPR005801 ADC synthase GO:0009058 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 SUPERFAMILY SSF51905 3 309 3.05E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 58 68 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 1.1E-57 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 298 1.3E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 309 9.0E-109 T 11-11-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.7E-31 T 11-11-2016 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.7E-31 T 11-11-2016 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 1.7E-31 T 11-11-2016 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.7E-31 T 11-11-2016 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.7E-31 T 11-11-2016 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 Gene3D G3DSA:3.50.50.60 113 306 6.2E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 11-11-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 WS_RS02225 2aec193d2eeb7ec69ba0a765344c397b 315 Gene3D G3DSA:3.50.50.60 3 112 1.0E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 WS_RS07935 9433a6e2fd0f5db9ffd741ff82e76d33 576 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 11-11-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 WS_RS07935 9433a6e2fd0f5db9ffd741ff82e76d33 576 SUPERFAMILY SSF56762 1 553 3.66E-167 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS07935 9433a6e2fd0f5db9ffd741ff82e76d33 576 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 544 553 - T 11-11-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 WS_RS07935 9433a6e2fd0f5db9ffd741ff82e76d33 576 Pfam PF00374 Nickel-dependent hydrogenase 40 553 6.3E-207 T 11-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 WS_RS07935 9433a6e2fd0f5db9ffd741ff82e76d33 576 Gene3D G3DSA:1.10.645.10 1 553 5.4E-195 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS05585 cbfebeb257ff047e7dec1eb0ae6e7989 187 Gene3D G3DSA:3.40.50.360 1 174 2.2E-42 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS05585 cbfebeb257ff047e7dec1eb0ae6e7989 187 Pfam PF02525 Flavodoxin-like fold 2 171 3.1E-42 T 11-11-2016 IPR003680 Flavodoxin-like fold WS_RS05585 cbfebeb257ff047e7dec1eb0ae6e7989 187 SUPERFAMILY SSF52218 1 174 3.26E-44 T 11-11-2016 IPR029039 Flavoprotein-like domain WS_RS01510 d64f679c4cf174fcd8bfa7f66dfecea7 218 SUPERFAMILY SSF51306 85 215 6.8E-22 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C WS_RS01510 d64f679c4cf174fcd8bfa7f66dfecea7 218 Gene3D G3DSA:2.10.109.10 93 217 8.9E-21 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain WS_RS01510 d64f679c4cf174fcd8bfa7f66dfecea7 218 Pfam PF00717 Peptidase S24-like 134 199 5.8E-14 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B WS_RS01510 d64f679c4cf174fcd8bfa7f66dfecea7 218 ProSitePatterns PS00501 Signal peptidases I serine active site. 136 143 - T 11-11-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 WS_RS05800 43a755bbaa6bd255db2fa4f2c16261aa 230 Gene3D G3DSA:3.40.50.180 28 220 2.2E-74 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 WS_RS05800 43a755bbaa6bd255db2fa4f2c16261aa 230 SUPERFAMILY SSF52738 33 220 5.36E-66 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 WS_RS05800 43a755bbaa6bd255db2fa4f2c16261aa 230 Pfam PF01339 CheB methylesterase 36 214 7.9E-58 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 WS_RS05310 97ccefe80dba75015a97451166201487 546 Pfam PF03432 Relaxase/Mobilisation nuclease domain 53 300 1.3E-7 T 11-11-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 WS_RS07265 52c1725fe3df3a1c84f491be207f636f 70 SUPERFAMILY SSF82057 2 70 1.24E-24 T 11-11-2016 WS_RS07265 52c1725fe3df3a1c84f491be207f636f 70 Pfam PF03831 PhnA domain 3 70 1.9E-29 T 11-11-2016 IPR013988 PhnA protein, C-terminal WS_RS07265 52c1725fe3df3a1c84f491be207f636f 70 Gene3D G3DSA:2.30.30.40 2 70 3.9E-30 T 11-11-2016 WS_RS04210 68fa5b559ebd9ebc3576df4d5943339e 263 SUPERFAMILY SSF55120 3 218 2.88E-58 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 WS_RS04210 68fa5b559ebd9ebc3576df4d5943339e 263 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 13 160 7.5E-43 T 11-11-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 WS_RS00025 d20a19cd3a679108ae68124f75ca4777 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 208 18.003 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 WS_RS00025 d20a19cd3a679108ae68124f75ca4777 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 8 207 8.3E-48 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 WS_RS00025 d20a19cd3a679108ae68124f75ca4777 208 SMART SM01207 13 200 1.3E-70 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 WS_RS00025 d20a19cd3a679108ae68124f75ca4777 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 199 7.9E-41 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 WS_RS07500 0298bae4a4e03e24cb1ee8cfeb41fce2 366 Gene3D G3DSA:3.10.580.10 180 313 6.7E-12 T 11-11-2016 WS_RS07500 0298bae4a4e03e24cb1ee8cfeb41fce2 366 Pfam PF01595 Domain of unknown function DUF21 10 178 1.7E-24 T 11-11-2016 IPR002550 Domain of unknown function DUF21 WS_RS07500 0298bae4a4e03e24cb1ee8cfeb41fce2 366 Pfam PF00571 CBS domain 259 313 0.0016 T 11-11-2016 IPR000644 CBS domain WS_RS07500 0298bae4a4e03e24cb1ee8cfeb41fce2 366 SUPERFAMILY SSF54631 181 314 4.72E-22 T 11-11-2016 WS_RS05730 d7a796bbf3dfe60810a0fc936280e628 145 Pfam PF02391 MoaE protein 22 114 3.0E-13 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS05730 d7a796bbf3dfe60810a0fc936280e628 145 SUPERFAMILY SSF54690 6 139 8.63E-32 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS05730 d7a796bbf3dfe60810a0fc936280e628 145 Gene3D G3DSA:3.90.1170.40 1 141 2.6E-32 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 WS_RS10400 9d7106f61ee5e45710c62bac36a128da 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 353 7.6E-69 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS10400 9d7106f61ee5e45710c62bac36a128da 434 SUPERFAMILY SSF52540 91 358 9.43E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10400 9d7106f61ee5e45710c62bac36a128da 434 SMART SM00382 156 337 6.1E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS10400 9d7106f61ee5e45710c62bac36a128da 434 Gene3D G3DSA:3.40.50.300 91 355 3.0E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS10400 9d7106f61ee5e45710c62bac36a128da 434 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 10 433 2.1E-179 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS10400 9d7106f61ee5e45710c62bac36a128da 434 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 344 353 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 WS_RS03820 712773f7ddd4d38fb9fc5020019ad0f4 119 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 23.33 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 WS_RS03820 712773f7ddd4d38fb9fc5020019ad0f4 119 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 115 1.8E-31 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 WS_RS03820 712773f7ddd4d38fb9fc5020019ad0f4 119 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 6.5E-31 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 WS_RS03820 712773f7ddd4d38fb9fc5020019ad0f4 119 PIRSF PIRSF004761 1 117 4.3E-33 T 11-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 WS_RS02725 876e7e4e500e5f2cfe893c7880dfe30a 148 Pfam PF04214 Protein of unknown function, DUF 51 118 1.8E-30 T 11-11-2016 IPR007332 Protein of unknown function DUF411 WS_RS03895 0190a9f543cb06b76ea215c96140f86d 176 Pfam PF12118 SprA-related family 37 155 3.8E-29 T 11-11-2016 IPR021973 SprA-related family WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 Pfam PF11812 Domain of unknown function (DUF3333) 78 128 3.5E-8 T 11-11-2016 IPR024573 Domain of unknown function DUF3333 WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 Pfam PF11812 Domain of unknown function (DUF3333) 14 70 3.4E-12 T 11-11-2016 IPR024573 Domain of unknown function DUF3333 WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 187 389 5.2E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 SUPERFAMILY SSF161098 23 47 4.19E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 SUPERFAMILY SSF161098 150 383 4.19E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 141 387 1.7E-66 T 11-11-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 Gene3D G3DSA:1.10.3720.10 147 389 2.5E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS04540 b365bec33f97651c4c99ddc8fd19871e 390 Gene3D G3DSA:1.10.3720.10 33 56 2.5E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 WS_RS07160 f37e61a64662d2948316cbfeb18e04fa 207 Gene3D G3DSA:3.40.109.10 5 206 1.4E-64 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 WS_RS07160 f37e61a64662d2948316cbfeb18e04fa 207 SUPERFAMILY SSF55469 5 205 1.7E-54 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 WS_RS07160 f37e61a64662d2948316cbfeb18e04fa 207 Pfam PF00881 Nitroreductase family 12 186 3.1E-26 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 WS_RS05375 e1a3c16e9d821f26f61bf8b046214c7b 441 Pfam PF01425 Amidase 19 429 3.0E-80 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS05375 e1a3c16e9d821f26f61bf8b046214c7b 441 SUPERFAMILY SSF75304 3 436 1.22E-109 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS05375 e1a3c16e9d821f26f61bf8b046214c7b 441 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 35 437 1.4E-175 T 11-11-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 WS_RS05375 e1a3c16e9d821f26f61bf8b046214c7b 441 Gene3D G3DSA:3.90.1300.10 3 436 1.7E-105 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 WS_RS09145 671e4d92948fbefab61ad37f84691ddd 276 Gene3D G3DSA:3.40.190.10 42 168 1.6E-54 T 11-11-2016 WS_RS09145 671e4d92948fbefab61ad37f84691ddd 276 PIRSF PIRSF002854 1 276 2.3E-102 T 11-11-2016 IPR004872 Lipoprotein NlpA family WS_RS09145 671e4d92948fbefab61ad37f84691ddd 276 Pfam PF03180 NLPA lipoprotein 43 276 3.2E-93 T 11-11-2016 IPR004872 Lipoprotein NlpA family WS_RS09145 671e4d92948fbefab61ad37f84691ddd 276 SUPERFAMILY SSF53850 42 276 2.06E-81 T 11-11-2016 WS_RS01610 21a370153cfd4629d1c5a9a7c8ffd89d 316 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 153 296 1.8E-37 T 11-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 WS_RS01610 21a370153cfd4629d1c5a9a7c8ffd89d 316 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 10 118 9.4E-18 T 11-11-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 WS_RS01610 21a370153cfd4629d1c5a9a7c8ffd89d 316 Gene3D G3DSA:3.40.50.2000 2 153 3.9E-32 T 11-11-2016 WS_RS01610 21a370153cfd4629d1c5a9a7c8ffd89d 316 SUPERFAMILY SSF53756 2 315 1.88E-75 T 11-11-2016 WS_RS01610 21a370153cfd4629d1c5a9a7c8ffd89d 316 Gene3D G3DSA:3.40.50.2000 154 314 1.3E-27 T 11-11-2016 WS_RS04580 320f0c33824cfa18378cc8f1b9ac5c23 76 Pfam PF04023 FeoA domain 1 72 1.7E-13 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 WS_RS04580 320f0c33824cfa18378cc8f1b9ac5c23 76 SMART SM00899 1 73 1.3E-12 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 WS_RS04580 320f0c33824cfa18378cc8f1b9ac5c23 76 SUPERFAMILY SSF50037 3 73 5.8E-12 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal WS_RS02900 786dfc54e2524f0205f45e71ad49cfd8 522 Pfam PF03929 PepSY-associated TM region 16 373 1.9E-25 T 11-11-2016 IPR005625 PepSY-associated TM protein WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 Gene3D G3DSA:3.30.300.30 407 507 6.9E-26 T 11-11-2016 WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 498 5.0E-13 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 Gene3D G3DSA:3.40.50.980 5 171 2.1E-43 T 11-11-2016 WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 SUPERFAMILY SSF56801 4 510 8.9E-145 T 11-11-2016 WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 Gene3D G3DSA:2.30.38.10 333 402 1.9E-26 T 11-11-2016 WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 Pfam PF00501 AMP-binding enzyme 10 412 5.2E-109 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 Gene3D G3DSA:3.40.50.980 172 332 3.6E-39 T 11-11-2016 WS_RS01175 6d00de6e84f1e13cfe18370b26c5c44f 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 11-11-2016 IPR020845 AMP-binding, conserved site WS_RS00200 56b59efe16cdc234c2d641218757bc11 388 Gene3D G3DSA:3.40.50.2000 195 358 1.3E-19 T 11-11-2016 WS_RS00200 56b59efe16cdc234c2d641218757bc11 388 SUPERFAMILY SSF53756 13 380 9.74E-67 T 11-11-2016 WS_RS00200 56b59efe16cdc234c2d641218757bc11 388 Pfam PF13477 Glycosyl transferase 4-like 2 151 1.2E-20 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 WS_RS00200 56b59efe16cdc234c2d641218757bc11 388 Pfam PF00534 Glycosyl transferases group 1 196 358 5.1E-30 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 WS_RS05460 79fd97edf694fdf7bf39a3eb8ff757f9 101 Gene3D G3DSA:3.30.70.120 1 99 5.3E-16 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal WS_RS05460 79fd97edf694fdf7bf39a3eb8ff757f9 101 Pfam PF02641 Uncharacterized ACR, COG1993 10 86 1.5E-6 T 11-11-2016 IPR003793 Domain of unknown function DUF190 WS_RS05460 79fd97edf694fdf7bf39a3eb8ff757f9 101 SUPERFAMILY SSF54913 1 99 4.0E-19 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta WS_RS08885 e0a2e5c740d627b2184c1b2e60abb812 257 Pfam PF00795 Carbon-nitrogen hydrolase 25 252 1.0E-20 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS08885 e0a2e5c740d627b2184c1b2e60abb812 257 Gene3D G3DSA:3.60.110.10 1 256 1.1E-45 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS08885 e0a2e5c740d627b2184c1b2e60abb812 257 SUPERFAMILY SSF56317 1 256 1.02E-42 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 Gene3D G3DSA:3.30.160.20 207 282 1.4E-33 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 SUPERFAMILY SSF75620 10 350 1.24E-128 T 11-11-2016 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 39.203 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 SMART SM00937 61 175 3.5E-54 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 352 1.7E-161 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 Gene3D G3DSA:1.20.58.410 5 90 4.1E-11 T 11-11-2016 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 Pfam PF00472 RF-1 domain 208 317 1.4E-41 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 WS_RS03920 0a049acb387d6d1babd7de2f0688b1e1 355 Pfam PF03462 PCRF domain 11 200 4.4E-67 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 WS_RS10785 43b300999d0e9a5cacca8c09ebfb14ef 144 PIRSF PIRSF015875 1 144 3.8E-20 T 11-11-2016 IPR007418 Protein of unknown function DUF474 WS_RS02200 0182ca2797410f3e1da29bf9c51e10f3 407 Pfam PF00155 Aminotransferase class I and II 34 393 5.3E-56 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 WS_RS02200 0182ca2797410f3e1da29bf9c51e10f3 407 Gene3D G3DSA:3.40.640.10 47 267 6.0E-57 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 WS_RS02200 0182ca2797410f3e1da29bf9c51e10f3 407 Gene3D G3DSA:3.90.1150.10 268 399 1.6E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 WS_RS02200 0182ca2797410f3e1da29bf9c51e10f3 407 SUPERFAMILY SSF53383 6 400 3.99E-102 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase WS_RS08310 16e85a45648b5e6426a9a8a33c2b47e8 281 Pfam PF05681 Fumarate hydratase (Fumerase) 10 279 8.7E-110 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 WS_RS08310 16e85a45648b5e6426a9a8a33c2b47e8 281 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 280 5.8E-91 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 59 71 - T 11-11-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 21.82 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 SUPERFAMILY SSF50249 7 83 3.3E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 3.7E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 3.7E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 3.7E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 Pfam PF00366 Ribosomal protein S17 13 79 7.2E-26 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 Gene3D G3DSA:2.40.50.140 8 83 3.2E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 74 6.0E-32 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08040 cd602b1fb2d78b4d1cc90457eec1d3c6 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 78 1.0E-30 T 11-11-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 WS_RS08590 f92b1ed96c46c35726003e009eaaebad 247 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 3 238 1.1E-55 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS08590 f92b1ed96c46c35726003e009eaaebad 247 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 2 244 26.885 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS08590 f92b1ed96c46c35726003e009eaaebad 247 SUPERFAMILY SSF51366 3 238 1.22E-61 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 WS_RS08590 f92b1ed96c46c35726003e009eaaebad 247 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 33 46 - T 11-11-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS08590 f92b1ed96c46c35726003e009eaaebad 247 Gene3D G3DSA:3.20.20.70 2 246 2.2E-73 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS08590 f92b1ed96c46c35726003e009eaaebad 247 Pfam PF00290 Tryptophan synthase alpha chain 2 244 3.9E-63 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 WS_RS09895 82ed740dd71f035eceda234fd57a87b0 139 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 28 115 2.2E-24 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 WS_RS09895 82ed740dd71f035eceda234fd57a87b0 139 SUPERFAMILY SSF52540 29 106 3.84E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS09895 82ed740dd71f035eceda234fd57a87b0 139 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 112 3.6E-23 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 WS_RS09895 82ed740dd71f035eceda234fd57a87b0 139 Gene3D G3DSA:3.40.50.300 13 137 3.0E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 Gene3D G3DSA:3.40.50.1450 2 163 1.6E-51 T 11-11-2016 IPR023430 Peptidase HybD-like domain WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 Pfam PF01750 Hydrogenase maturation protease 20 150 3.8E-36 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 SUPERFAMILY SSF53163 2 163 7.59E-41 T 11-11-2016 IPR023430 Peptidase HybD-like domain WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 PRINTS PR00446 Hydrogen uptake protein signature 58 68 2.8E-17 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.8E-17 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 PRINTS PR00446 Hydrogen uptake protein signature 70 86 2.8E-17 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.8E-17 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 PRINTS PR00446 Hydrogen uptake protein signature 37 54 2.8E-17 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 156 1.2E-53 T 11-11-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 WS_RS07925 3bbac4d8e9bf2a2c32ede4a832d09bf2 178 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 151 8.3E-39 T 11-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 WS_RS03075 b763f8dd331b162c8c93826c81cd8fdb 76 Pfam PF00550 Phosphopantetheine attachment site 6 72 4.8E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain WS_RS03075 b763f8dd331b162c8c93826c81cd8fdb 76 Gene3D G3DSA:1.10.1200.10 3 74 7.8E-33 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain WS_RS03075 b763f8dd331b162c8c93826c81cd8fdb 76 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 23.13 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03075 b763f8dd331b162c8c93826c81cd8fdb 76 SUPERFAMILY SSF47336 3 75 3.27E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain WS_RS03075 b763f8dd331b162c8c93826c81cd8fdb 76 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site WS_RS03075 b763f8dd331b162c8c93826c81cd8fdb 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 40 72 5.0E-11 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS03075 b763f8dd331b162c8c93826c81cd8fdb 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 9.1E-36 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS07880 dcf48fd9af2d222971163a582aa6fdfe 452 Pfam PF01554 MatE 29 189 1.6E-24 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS07880 dcf48fd9af2d222971163a582aa6fdfe 452 Pfam PF01554 MatE 251 410 7.0E-32 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS07880 dcf48fd9af2d222971163a582aa6fdfe 452 PIRSF PIRSF006603 7 452 5.3E-89 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS07880 dcf48fd9af2d222971163a582aa6fdfe 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 29 414 1.6E-85 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS03290 4c008238564fd642741baab3b29fd363 241 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 215 3.7E-48 T 11-11-2016 WS_RS04235 0c46cd7f74b43f5165fbf8021072b416 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 124 6.2E-21 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 WS_RS08675 45220a82c784e0a30f5e3df4b9d3cb72 552 SMART SM00283 326 551 1.2E-32 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS08675 45220a82c784e0a30f5e3df4b9d3cb72 552 Gene3D G3DSA:1.10.287.950 353 543 1.0E-44 T 11-11-2016 WS_RS08675 45220a82c784e0a30f5e3df4b9d3cb72 552 SUPERFAMILY SSF58104 233 262 3.27E-54 T 11-11-2016 WS_RS08675 45220a82c784e0a30f5e3df4b9d3cb72 552 SUPERFAMILY SSF58104 352 550 3.27E-54 T 11-11-2016 WS_RS08675 45220a82c784e0a30f5e3df4b9d3cb72 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 482 7.6E-30 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS02520 fc1787319dd5ec5ce8ca853e7aca6930 170 Pfam PF00430 ATP synthase B/B' CF(0) 30 140 2.0E-15 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 WS_RS02520 fc1787319dd5ec5ce8ca853e7aca6930 170 Hamap MF_01398 ATP synthase subunit b [atpF]. 15 169 9.458 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 WS_RS08355 d5c0543831dca77f68d6a707910225f3 200 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 5 122 4.0E-63 T 11-11-2016 IPR007172 Domain of unknown function DUF374 WS_RS08355 d5c0543831dca77f68d6a707910225f3 200 Pfam PF04028 Domain of unknown function (DUF374) 57 122 5.8E-27 T 11-11-2016 IPR007172 Domain of unknown function DUF374 WS_RS05445 e51d3eeb05635aee570a2f855df292aa 294 Pfam PF10543 ORF6N domain 14 99 2.3E-31 T 11-11-2016 IPR018873 KilA-N, DNA-binding domain WS_RS05455 c10a76362039bf75957f3c900790e79d 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 17.576 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 WS_RS05455 c10a76362039bf75957f3c900790e79d 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 5.2E-20 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 WS_RS05455 c10a76362039bf75957f3c900790e79d 128 TIGRFAM TIGR00494 crcB: protein CrcB 5 118 5.6E-28 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 WS_RS09865 9850e8cdd02f505975a27e8339492811 261 SUPERFAMILY SSF103088 121 241 1.31E-21 T 11-11-2016 IPR006665 OmpA-like domain WS_RS09865 9850e8cdd02f505975a27e8339492811 261 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 6 60 1.6E-14 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain WS_RS09865 9850e8cdd02f505975a27e8339492811 261 Gene3D G3DSA:3.30.1330.60 120 239 2.5E-22 T 11-11-2016 IPR006665 OmpA-like domain WS_RS09865 9850e8cdd02f505975a27e8339492811 261 Pfam PF00691 OmpA family 148 233 2.6E-15 T 11-11-2016 IPR006665 OmpA-like domain WS_RS06255 db2066dc2ab706d242c14f6f9473df03 330 Gene3D G3DSA:3.30.930.10 4 330 2.6E-115 T 11-11-2016 WS_RS06255 db2066dc2ab706d242c14f6f9473df03 330 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 12 80 1.2E-14 T 11-11-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 WS_RS06255 db2066dc2ab706d242c14f6f9473df03 330 Pfam PF01409 tRNA synthetases class II core domain (F) 84 329 6.8E-95 T 11-11-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 WS_RS06255 db2066dc2ab706d242c14f6f9473df03 330 SUPERFAMILY SSF46589 6 90 6.28E-16 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 WS_RS06255 db2066dc2ab706d242c14f6f9473df03 330 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 35 329 1.3E-99 T 11-11-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 WS_RS06255 db2066dc2ab706d242c14f6f9473df03 330 SUPERFAMILY SSF55681 85 330 3.09E-70 T 11-11-2016 WS_RS06255 db2066dc2ab706d242c14f6f9473df03 330 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 329 45.471 T 11-11-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 SUPERFAMILY SSF52540 7 176 2.73E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 272 5.9E-68 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 5.8E-21 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 Hamap MF_00367 GTPase Era [era]. 2 289 31.451 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 Gene3D G3DSA:3.40.50.300 4 167 8.9E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 Pfam PF07650 KH domain 202 277 9.5E-19 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 Gene3D G3DSA:3.30.300.20 184 284 3.0E-35 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 Pfam PF01926 50S ribosome-binding GTPase 7 112 4.4E-21 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 WS_RS06190 b8b4fe6e5906491e799eb76a1d5a192d 293 SUPERFAMILY SSF54814 175 291 4.97E-37 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 WS_RS05870 8501eecdc66f55d647529bc86e914540 308 Gene3D G3DSA:3.30.2010.10 98 180 1.7E-25 T 11-11-2016 WS_RS05870 8501eecdc66f55d647529bc86e914540 308 Pfam PF01435 Peptidase family M48 98 306 4.8E-45 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 WS_RS00080 2c5a907b46859abdef80942fdff6f575 116 SUPERFAMILY SSF54913 2 98 3.34E-15 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta WS_RS07865 31d3271ccef49437923a80c47391350e 219 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 143 210 1.2E-19 T 11-11-2016 WS_RS07865 31d3271ccef49437923a80c47391350e 219 SUPERFAMILY SSF55166 132 214 1.88E-17 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 WS_RS03325 9d0ea688dd63989b3ef7c437905f75d3 61 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 20 51 4.3E-8 T 11-11-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 WS_RS01445 8870e5c97fe96f9dcbcf08840141b378 263 Pfam PF00793 DAHP synthetase I family 1 252 2.6E-58 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 WS_RS01445 8870e5c97fe96f9dcbcf08840141b378 263 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 263 46.721 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 WS_RS01445 8870e5c97fe96f9dcbcf08840141b378 263 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 1 262 2.9E-114 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 WS_RS01445 8870e5c97fe96f9dcbcf08840141b378 263 SUPERFAMILY SSF51569 2 262 1.47E-85 T 11-11-2016 WS_RS01445 8870e5c97fe96f9dcbcf08840141b378 263 Gene3D G3DSA:3.20.20.70 1 262 2.5E-112 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS09125 6b2375a5e20de6714486b6fb881d4512 449 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 15 442 57.012 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 WS_RS09125 6b2375a5e20de6714486b6fb881d4512 449 Pfam PF01964 Radical SAM ThiC family 16 437 3.7E-197 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 WS_RS09125 6b2375a5e20de6714486b6fb881d4512 449 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 16 438 6.6E-204 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 WS_RS10175 e6d908e6b8621fef485b11c2d8fd2413 203 Pfam PF13098 Thioredoxin-like domain 68 173 2.8E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS10175 e6d908e6b8621fef485b11c2d8fd2413 203 SUPERFAMILY SSF52833 69 177 5.68E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS10175 e6d908e6b8621fef485b11c2d8fd2413 203 Gene3D G3DSA:3.40.30.10 69 177 9.3E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS09280 77bb03f776b00c9b960511a0b485a79e 136 Gene3D G3DSA:2.30.290.10 3 116 2.8E-32 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain WS_RS09280 77bb03f776b00c9b960511a0b485a79e 136 Pfam PF02623 FliW protein 4 114 1.3E-27 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 WS_RS09280 77bb03f776b00c9b960511a0b485a79e 136 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 121 17.852 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 WS_RS09280 77bb03f776b00c9b960511a0b485a79e 136 SUPERFAMILY SSF141457 3 118 1.44E-30 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain WS_RS04855 17cd924625e5a71abf68f9eece4c934c 292 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 244 6.4E-40 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 WS_RS04855 17cd924625e5a71abf68f9eece4c934c 292 Gene3D G3DSA:3.40.50.620 3 240 8.6E-51 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS04855 17cd924625e5a71abf68f9eece4c934c 292 SUPERFAMILY SSF52402 3 225 1.43E-51 T 11-11-2016 WS_RS04230 4b4b5c8b67805cdeaa0353f94927f2fd 142 Pfam PF01618 MotA/TolQ/ExbB proton channel family 44 137 7.5E-30 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 WS_RS04230 4b4b5c8b67805cdeaa0353f94927f2fd 142 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 4 138 7.8E-53 T 11-11-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 WS_RS02735 961d660a09486c698e0bdbae18657bf8 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 1.1E-14 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 WS_RS02735 961d660a09486c698e0bdbae18657bf8 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 96 1.4E-22 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 WS_RS02735 961d660a09486c698e0bdbae18657bf8 96 SUPERFAMILY SSF141000 2 94 1.11E-20 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 WS_RS02735 961d660a09486c698e0bdbae18657bf8 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 96 18.755 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 WS_RS08695 1fe81b4bdc51b8c9edbc66bdc09e4a07 188 SUPERFAMILY SSF46626 133 186 3.01E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS08695 1fe81b4bdc51b8c9edbc66bdc09e4a07 188 Gene3D G3DSA:1.10.760.10 121 186 7.5E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS05295 91abea0c6e473bf7ec06fd5aebceeb9e 116 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 8 63 1.0E-10 T 11-11-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 WS_RS10235 0383d98e1f380921e9f64c47bec0a6bb 360 Pfam PF01699 Sodium/calcium exchanger protein 176 318 5.3E-28 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 WS_RS10235 0383d98e1f380921e9f64c47bec0a6bb 360 Pfam PF01699 Sodium/calcium exchanger protein 6 144 2.9E-33 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 WS_RS10235 0383d98e1f380921e9f64c47bec0a6bb 360 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 5 313 1.5E-87 T 11-11-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 WS_RS05105 f8e5fbaaa30cae7a5ae1f3394d0f0f85 310 Gene3D G3DSA:3.30.160.60 284 309 1.0E-7 T 11-11-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 WS_RS05105 f8e5fbaaa30cae7a5ae1f3394d0f0f85 310 Pfam PF02618 YceG-like family 44 310 3.5E-53 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like WS_RS05105 f8e5fbaaa30cae7a5ae1f3394d0f0f85 310 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 93 309 5.4E-36 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like WS_RS00825 4e6d9d755d9d7c5b1671566af2f533d7 93 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 1 88 4.0E-44 T 11-11-2016 IPR009707 Membrane protein GlpM/YdgC WS_RS00825 4e6d9d755d9d7c5b1671566af2f533d7 93 Pfam PF06942 GlpM protein 1 91 1.7E-36 T 11-11-2016 IPR009707 Membrane protein GlpM/YdgC WS_RS08660 5a19de5ebf91f5a9e11571df0beb63df 646 Pfam PF00361 Proton-conducting membrane transporter 124 406 2.1E-48 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08660 5a19de5ebf91f5a9e11571df0beb63df 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 209 230 1.9E-9 T 11-11-2016 WS_RS08660 5a19de5ebf91f5a9e11571df0beb63df 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 299 311 1.9E-9 T 11-11-2016 WS_RS08660 5a19de5ebf91f5a9e11571df0beb63df 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 231 257 1.9E-9 T 11-11-2016 WS_RS08660 5a19de5ebf91f5a9e11571df0beb63df 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 100 120 1.9E-9 T 11-11-2016 WS_RS08660 5a19de5ebf91f5a9e11571df0beb63df 646 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 69 94 1.9E-9 T 11-11-2016 WS_RS02335 88cf37058f6168494741d5278417234f 260 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 229 5.9E-50 T 11-11-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 WS_RS02335 88cf37058f6168494741d5278417234f 260 Gene3D G3DSA:3.20.20.140 1 257 7.8E-43 T 11-11-2016 WS_RS02335 88cf37058f6168494741d5278417234f 260 SUPERFAMILY SSF89550 1 259 5.1E-49 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 WS_RS02335 88cf37058f6168494741d5278417234f 260 Pfam PF02811 PHP domain 4 188 2.4E-9 T 11-11-2016 IPR004013 PHP domain GO:0003824 WS_RS06325 95e77655aec6f2532163165dfd594687 451 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 32 447 1.8E-66 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 WS_RS06325 95e77655aec6f2532163165dfd594687 451 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 449 2.1E-48 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 WS_RS01765 dcf9a0c967f2f168cad15d886b03430d 405 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 153 330 1.5E-11 T 11-11-2016 IPR004477 ComEC/Rec2-related protein WS_RS01765 dcf9a0c967f2f168cad15d886b03430d 405 Pfam PF03772 Competence protein 140 370 1.9E-20 T 11-11-2016 IPR004477 ComEC/Rec2-related protein WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 270 297 3.5E-18 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 3.5E-18 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 Gene3D G3DSA:1.10.287.950 203 391 5.6E-46 T 11-11-2016 WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 SUPERFAMILY SSF58104 195 382 7.19E-48 T 11-11-2016 WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 SMART SM00283 180 398 8.8E-24 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 Pfam PF10442 FIST C domain 14 135 5.5E-14 T 11-11-2016 IPR019494 FIST, C-domain WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 240 376 2.4E-38 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS10535 011a7eeef2735e05cf31bcf1344e9f89 404 SMART SM01204 11 138 2.9E-24 T 11-11-2016 IPR019494 FIST, C-domain WS_RS02380 c44888f261d9d409286993027d591ed1 329 Pfam PF00146 NADH dehydrogenase 11 323 6.2E-110 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02380 c44888f261d9d409286993027d591ed1 329 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 50 65 - T 11-11-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS02380 c44888f261d9d409286993027d591ed1 329 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 4 329 23.214 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08605 5839955e2d52b8f08731aa631c5a3b85 389 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 8 361 7.3E-29 T 11-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS08605 5839955e2d52b8f08731aa631c5a3b85 389 Gene3D G3DSA:3.20.20.210 5 386 3.2E-76 T 11-11-2016 WS_RS08605 5839955e2d52b8f08731aa631c5a3b85 389 SUPERFAMILY SSF51726 4 386 2.75E-60 T 11-11-2016 WS_RS02445 1a38020c154bb6a0a21ea33f3a999878 264 Gene3D G3DSA:1.10.10.10 1 78 1.2E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS02445 1a38020c154bb6a0a21ea33f3a999878 264 SUPERFAMILY SSF46785 2 82 6.43E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 SUPERFAMILY SSF82114 146 280 1.87E-27 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 Gene3D G3DSA:3.40.50.620 13 35 3.6E-5 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 Gene3D G3DSA:3.40.50.620 72 158 3.1E-17 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 SUPERFAMILY SSF52374 16 158 3.97E-14 T 11-11-2016 WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 Pfam PF06574 FAD synthetase 73 137 4.5E-5 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 Pfam PF06574 FAD synthetase 12 36 1.4E-4 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 Pfam PF01687 Riboflavin kinase 156 277 1.0E-21 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 Gene3D G3DSA:2.40.30.30 160 282 2.7E-22 T 11-11-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 WS_RS02865 1301d97ae750b06a874100527f76bcf2 295 SMART SM00904 155 279 1.8E-32 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 WS_RS01570 4a906f782d2bdfb4b4d7864550538bb2 99 Gene3D G3DSA:1.20.1250.20 8 64 2.2E-4 T 11-11-2016 WS_RS00795 dc72e91108f1915d8a1891ac03fa7ef7 203 Pfam PF13114 RecO N terminal 2 70 7.1E-31 T 11-11-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal WS_RS05675 c4f13286fdddc3173cc016ce7965b428 327 Pfam PF04332 Protein of unknown function (DUF475) 43 323 4.3E-82 T 11-11-2016 IPR007427 Protein of unknown function DUF475 WS_RS04335 b9a481b22309534e621353d4f8499ca0 482 SUPERFAMILY SSF56954 3 465 2.09E-91 T 11-11-2016 WS_RS04335 b9a481b22309534e621353d4f8499ca0 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 463 1.3E-92 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 WS_RS04335 b9a481b22309534e621353d4f8499ca0 482 Pfam PF02321 Outer membrane efflux protein 64 253 1.1E-16 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS04335 b9a481b22309534e621353d4f8499ca0 482 Pfam PF02321 Outer membrane efflux protein 280 461 1.1E-21 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS04335 b9a481b22309534e621353d4f8499ca0 482 Gene3D G3DSA:1.20.1600.10 54 466 1.6E-91 T 11-11-2016 WS_RS00695 6c5d2b9c92b59c6862050a2fd15939cd 396 Gene3D G3DSA:3.30.70.1380 250 330 6.0E-27 T 11-11-2016 WS_RS00695 6c5d2b9c92b59c6862050a2fd15939cd 396 Gene3D G3DSA:3.10.20.300 331 390 2.5E-16 T 11-11-2016 WS_RS00695 6c5d2b9c92b59c6862050a2fd15939cd 396 Pfam PF01969 Protein of unknown function DUF111 4 379 8.7E-143 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 WS_RS00695 6c5d2b9c92b59c6862050a2fd15939cd 396 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 3 380 4.3E-110 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 WS_RS00695 6c5d2b9c92b59c6862050a2fd15939cd 396 Hamap MF_01074 UPF0272 protein . 1 389 40.688 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 WS_RS07895 8d6c4ef3f2972bb5d37f523f0f120ab3 259 SUPERFAMILY SSF64167 4 258 5.36E-77 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 WS_RS07895 8d6c4ef3f2972bb5d37f523f0f120ab3 259 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 3 258 35.755 T 11-11-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 WS_RS07895 8d6c4ef3f2972bb5d37f523f0f120ab3 259 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 4 247 8.5E-69 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 WS_RS07895 8d6c4ef3f2972bb5d37f523f0f120ab3 259 Pfam PF01975 Survival protein SurE 5 194 5.5E-53 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 WS_RS07895 8d6c4ef3f2972bb5d37f523f0f120ab3 259 Gene3D G3DSA:3.40.1210.10 4 258 3.4E-77 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 WS_RS10180 73637e8359216db13ede722311afac93 910 Pfam PF01578 Cytochrome C assembly protein 667 870 3.0E-43 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 WS_RS10180 73637e8359216db13ede722311afac93 910 Pfam PF05140 ResB-like family 221 289 1.3E-13 T 11-11-2016 IPR007816 ResB-like domain WS_RS10180 73637e8359216db13ede722311afac93 910 Pfam PF05140 ResB-like family 74 116 1.3E-7 T 11-11-2016 IPR007816 ResB-like domain WS_RS01390 5ec621ba60176bb18c96bc5fe4660593 176 SUPERFAMILY SSF58104 2 173 1.7E-51 T 11-11-2016 WS_RS01390 5ec621ba60176bb18c96bc5fe4660593 176 SMART SM00283 1 173 4.6E-26 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS01390 5ec621ba60176bb18c96bc5fe4660593 176 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 9 105 6.8E-33 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS01390 5ec621ba60176bb18c96bc5fe4660593 176 Gene3D G3DSA:1.10.287.950 2 164 2.6E-46 T 11-11-2016 WS_RS04960 6e61f0e9b0a7d53dd9eb6234d16c7999 321 Gene3D G3DSA:1.20.58.340 244 321 1.2E-28 T 11-11-2016 WS_RS04960 6e61f0e9b0a7d53dd9eb6234d16c7999 321 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 321 5.1E-80 T 11-11-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 WS_RS04960 6e61f0e9b0a7d53dd9eb6234d16c7999 321 Pfam PF01544 CorA-like Mg2+ transporter protein 28 317 3.9E-56 T 11-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 WS_RS04960 6e61f0e9b0a7d53dd9eb6234d16c7999 321 Gene3D G3DSA:3.30.460.20 18 130 1.5E-4 T 11-11-2016 WS_RS04960 6e61f0e9b0a7d53dd9eb6234d16c7999 321 SUPERFAMILY SSF144083 256 319 4.84E-21 T 11-11-2016 WS_RS04960 6e61f0e9b0a7d53dd9eb6234d16c7999 321 SUPERFAMILY SSF143865 12 254 1.96E-33 T 11-11-2016 WS_RS06815 e61ca02a66befb4997d8bba90a7026e9 285 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 7 277 8.4E-16 T 11-11-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 WS_RS02635 9c34a270909716db84db3c38ddccc7a1 207 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 25 1.2E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS02635 9c34a270909716db84db3c38ddccc7a1 207 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 5.5E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS03805 25bcb70f9432e14deab40e629f3721cd 373 Pfam PF01924 Hydrogenase formation hypA family 15 368 6.6E-150 T 11-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 WS_RS03805 25bcb70f9432e14deab40e629f3721cd 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 1 370 3.2E-154 T 11-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 WS_RS03805 25bcb70f9432e14deab40e629f3721cd 373 PIRSF PIRSF005622 4 373 3.0E-160 T 11-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 WS_RS10290 a0374c7868c5d8e7bd3510b71d77ef82 358 Pfam PF04007 Protein of unknown function (DUF354) 3 338 1.6E-40 T 11-11-2016 IPR007152 Protein of unknown function DUF354 WS_RS10290 a0374c7868c5d8e7bd3510b71d77ef82 358 SUPERFAMILY SSF53756 13 330 4.71E-13 T 11-11-2016 WS_RS10290 a0374c7868c5d8e7bd3510b71d77ef82 358 PIRSF PIRSF005357 1 355 1.3E-70 T 11-11-2016 IPR007152 Protein of unknown function DUF354 WS_RS08950 0d1a6148b1985643ac940965c7bf29ce 259 SUPERFAMILY SSF88713 24 103 5.19E-39 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 WS_RS08950 0d1a6148b1985643ac940965c7bf29ce 259 SUPERFAMILY SSF88713 133 227 5.19E-39 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 WS_RS08950 0d1a6148b1985643ac940965c7bf29ce 259 Gene3D G3DSA:3.20.20.370 34 211 4.4E-30 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 WS_RS08950 0d1a6148b1985643ac940965c7bf29ce 259 Pfam PF01522 Polysaccharide deacetylase 60 206 2.7E-27 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 WS_RS00995 f123dfd488e540cd9f96c70fbfa3e700 214 Pfam PF09335 SNARE associated Golgi protein 58 173 2.0E-26 T 11-11-2016 IPR032816 SNARE associated Golgi protein WS_RS09990 4000340369c4c83db38637790ae51627 236 Pfam PF02591 C4-type zinc ribbon domain 198 230 5.5E-13 T 11-11-2016 IPR003743 C4-type zinc ribbon domain WS_RS03415 e3949162d359fd3eca95a4f8065ab3ab 374 Pfam PF09626 Dihaem cytochrome c 234 351 3.3E-29 T 11-11-2016 IPR018588 Dihaem cytochrome c WS_RS03415 e3949162d359fd3eca95a4f8065ab3ab 374 SUPERFAMILY SSF81342 3 191 1.41E-28 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 WS_RS03415 e3949162d359fd3eca95a4f8065ab3ab 374 Pfam PF01292 Prokaryotic cytochrome b561 6 181 5.0E-18 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 WS_RS03415 e3949162d359fd3eca95a4f8065ab3ab 374 Gene3D G3DSA:1.20.950.20 3 186 1.8E-8 T 11-11-2016 WS_RS05735 cb288fac842d18e05960e891b6b19834 166 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 118 1.7E-27 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 WS_RS05735 cb288fac842d18e05960e891b6b19834 166 SUPERFAMILY SSF52540 7 121 2.85E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05735 cb288fac842d18e05960e891b6b19834 166 Gene3D G3DSA:3.40.50.300 5 159 6.7E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05735 cb288fac842d18e05960e891b6b19834 166 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 157 1.1E-34 T 11-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 WS_RS09440 4e7fab2bdd55be9d7ab9a00d7d1375f8 198 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 7 189 20.469 T 11-11-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 WS_RS09440 4e7fab2bdd55be9d7ab9a00d7d1375f8 198 Pfam PF12804 MobA-like NTP transferase domain 11 153 2.6E-24 T 11-11-2016 IPR025877 MobA-like NTP transferase WS_RS09440 4e7fab2bdd55be9d7ab9a00d7d1375f8 198 SUPERFAMILY SSF53448 9 188 1.56E-21 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09440 4e7fab2bdd55be9d7ab9a00d7d1375f8 198 Gene3D G3DSA:3.90.550.10 9 193 1.1E-40 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases WS_RS09055 ae00d181b8ee95ef213084257926bf64 207 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-11-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 WS_RS09055 ae00d181b8ee95ef213084257926bf64 207 Pfam PF00239 Resolvase, N terminal domain 4 147 3.5E-34 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 WS_RS09055 ae00d181b8ee95ef213084257926bf64 207 SUPERFAMILY SSF53041 3 148 8.37E-30 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 WS_RS09055 ae00d181b8ee95ef213084257926bf64 207 Gene3D G3DSA:3.40.50.1390 4 133 2.6E-24 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 WS_RS09055 ae00d181b8ee95ef213084257926bf64 207 SMART SM00857 4 149 3.2E-37 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 WS_RS07845 bcce96100bcbb293787da9f0e44b7916 164 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site WS_RS07845 bcce96100bcbb293787da9f0e44b7916 164 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 113 161 3.3E-12 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain WS_RS07845 bcce96100bcbb293787da9f0e44b7916 164 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 163 1.2E-53 T 11-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 WS_RS07845 bcce96100bcbb293787da9f0e44b7916 164 Pfam PF00460 Flagella basal body rod protein 10 34 1.4E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 WS_RS04900 122faf78821ba58167aa3047455c79ed 633 Gene3D G3DSA:2.40.10.220 504 588 2.0E-4 T 11-11-2016 WS_RS04900 122faf78821ba58167aa3047455c79ed 633 Pfam PF07238 PilZ domain 506 606 1.5E-8 T 11-11-2016 IPR009875 PilZ domain GO:0035438 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 Gene3D G3DSA:3.40.50.620 1 158 1.3E-53 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 6.7E-56 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 SUPERFAMILY SSF52374 1 157 9.38E-46 T 11-11-2016 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 33.358 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 59 2.4E-16 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 Pfam PF01467 Cytidylyltransferase-like 6 134 7.0E-22 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 8.4E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 8.4E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 8.4E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 8.4E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 WS_RS02990 e68e163c2c2c61fe96d1c6a5ec4c4019 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 8.4E-46 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 WS_RS03090 6a389fb34f4f0f452a1a093cd10a1e1a 206 Gene3D G3DSA:1.10.10.10 154 184 2.9E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS03090 6a389fb34f4f0f452a1a093cd10a1e1a 206 Pfam PF13384 Homeodomain-like domain 156 189 6.5E-6 T 11-11-2016 WS_RS07515 f07dbcdbdb28187d88660ae2f1bcb440 100 PIRSF PIRSF007248 1 96 3.4E-42 T 11-11-2016 IPR016511 Uncharacterised conserved protein UCP007248 WS_RS07515 f07dbcdbdb28187d88660ae2f1bcb440 100 ProDom PD351196 CJ1463 JHP0230 HP0245 9 96 1.0E-45 T 11-11-2016 WS_RS07515 f07dbcdbdb28187d88660ae2f1bcb440 100 Pfam PF10135 Rod binding protein 55 89 4.1E-5 T 11-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal WS_RS04780 1f91a77eb4fc1670a72ffc4924c9132d 737 SUPERFAMILY SSF56935 18 737 2.24E-81 T 11-11-2016 WS_RS04780 1f91a77eb4fc1670a72ffc4924c9132d 737 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 142 8.1E-7 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS04780 1f91a77eb4fc1670a72ffc4924c9132d 737 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 720 737 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site WS_RS04780 1f91a77eb4fc1670a72ffc4924c9132d 737 Gene3D G3DSA:2.40.170.20 161 735 5.9E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS04780 1f91a77eb4fc1670a72ffc4924c9132d 737 Gene3D G3DSA:2.170.130.10 23 160 7.2E-7 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 WS_RS04780 1f91a77eb4fc1670a72ffc4924c9132d 737 Pfam PF00593 TonB dependent receptor 464 733 3.8E-34 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 WS_RS08630 22ec7d8ede3625f0f91d46a61ffcaab3 276 SUPERFAMILY SSF56770 28 159 8.9E-53 T 11-11-2016 WS_RS08630 22ec7d8ede3625f0f91d46a61ffcaab3 276 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 149 2.5E-26 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08630 22ec7d8ede3625f0f91d46a61ffcaab3 276 Gene3D G3DSA:3.40.50.700 29 153 2.3E-33 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS08630 22ec7d8ede3625f0f91d46a61ffcaab3 276 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 123 139 - T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS01020 a04ba1ccee263328cabc48db8d195749 305 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 210 295 4.4E-8 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 WS_RS01020 a04ba1ccee263328cabc48db8d195749 305 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 200 2.5E-36 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 WS_RS01020 a04ba1ccee263328cabc48db8d195749 305 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 294 21.703 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 WS_RS01020 a04ba1ccee263328cabc48db8d195749 305 SUPERFAMILY SSF52540 51 161 1.12E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01020 a04ba1ccee263328cabc48db8d195749 305 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 206 3.8E-33 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 WS_RS07275 22ea84b78972f53afb5d28ccf76b97d9 339 Pfam PF05987 Bacterial protein of unknown function (DUF898) 5 330 2.0E-107 T 11-11-2016 IPR010295 Protein of unknown function DUF898 WS_RS08765 f81f68af8652c92202cba8aa1e9d7344 214 Pfam PF02698 DUF218 domain 41 169 3.5E-12 T 11-11-2016 IPR003848 Domain of unknown function DUF218 WS_RS08765 f81f68af8652c92202cba8aa1e9d7344 214 Gene3D G3DSA:3.40.50.620 37 156 1.2E-11 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS00650 f7f661a85f0418cfffad677507d9af32 230 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.3E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS00650 f7f661a85f0418cfffad677507d9af32 230 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 26 4.4E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS00650 f7f661a85f0418cfffad677507d9af32 230 SUPERFAMILY SSF54523 9 149 1.1E-10 T 11-11-2016 WS_RS00650 f7f661a85f0418cfffad677507d9af32 230 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site WS_RS03715 b7dd276cf0ef8e7568cb8edc2d4ff4ab 256 Pfam PF05818 Enterobacterial TraT complement resistance protein 21 256 3.5E-73 T 11-11-2016 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 WS_RS00395 6f7201edc3dcdf1a829db8e4ab01aea1 185 Pfam PF02674 Colicin V production protein 7 153 1.3E-25 T 11-11-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 WS_RS01830 558e75ed0e9db2c38381347307473b32 171 Pfam PF03350 Uncharacterized protein family, UPF0114 9 134 1.5E-32 T 11-11-2016 IPR005134 Uncharacterised protein family UPF0114 WS_RS01830 558e75ed0e9db2c38381347307473b32 171 PIRSF PIRSF026509 1 171 1.5E-42 T 11-11-2016 IPR005134 Uncharacterised protein family UPF0114 WS_RS09105 87ec98355f3799402a990d22c878e9c8 155 Pfam PF04608 Phosphatidylglycerophosphatase A 5 145 3.1E-38 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 WS_RS09105 87ec98355f3799402a990d22c878e9c8 155 PIRSF PIRSF006162 1 152 4.5E-36 T 11-11-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 WS_RS09105 87ec98355f3799402a990d22c878e9c8 155 SUPERFAMILY SSF101307 4 145 4.58E-32 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 WS_RS09105 87ec98355f3799402a990d22c878e9c8 155 Gene3D G3DSA:1.10.3760.10 58 144 1.3E-6 T 11-11-2016 IPR027416 YutG-like domain WS_RS01575 42bcb8c4d7dc0af543e2a82543fe57ce 142 SUPERFAMILY SSF51391 2 134 2.09E-21 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 WS_RS01575 42bcb8c4d7dc0af543e2a82543fe57ce 142 Gene3D G3DSA:3.20.20.70 6 117 3.8E-18 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 WS_RS01575 42bcb8c4d7dc0af543e2a82543fe57ce 142 Pfam PF02581 Thiamine monophosphate synthase/TENI 6 115 1.4E-12 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 WS_RS05280 75447dcf513ef81006e27802a1ccf0bc 762 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 170 362 2.5E-32 T 11-11-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 WS_RS05280 75447dcf513ef81006e27802a1ccf0bc 762 Gene3D G3DSA:3.40.50.300 421 495 1.5E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05280 75447dcf513ef81006e27802a1ccf0bc 762 Gene3D G3DSA:3.40.50.300 563 689 1.5E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS05280 75447dcf513ef81006e27802a1ccf0bc 762 SUPERFAMILY SSF52540 389 689 1.33E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS08130 c88f122a031886994a7cadac06f46891 257 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 46 214 5.8E-49 T 11-11-2016 IPR003734 Domain of unknown function DUF155 WS_RS03995 6f8ea6d5f87dfdad10f8b4212573302b 256 Gene3D G3DSA:1.20.950.10 3 252 8.2E-95 T 11-11-2016 WS_RS03995 6f8ea6d5f87dfdad10f8b4212573302b 256 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 112 221 4.5E-14 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 WS_RS03995 6f8ea6d5f87dfdad10f8b4212573302b 256 PIRSF PIRSF000177 1 256 8.4E-140 T 11-11-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 WS_RS03995 6f8ea6d5f87dfdad10f8b4212573302b 256 SUPERFAMILY SSF81343 2 252 8.34E-77 T 11-11-2016 WS_RS02140 0c053ea807c20de1443a7a67fb49ff5f 239 Gene3D G3DSA:3.40.50.1820 15 229 1.0E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS02140 0c053ea807c20de1443a7a67fb49ff5f 239 SUPERFAMILY SSF53474 15 232 2.48E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS02140 0c053ea807c20de1443a7a67fb49ff5f 239 Pfam PF12697 Alpha/beta hydrolase family 28 151 1.2E-9 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 WS_RS08185 13aa0e5e374440c846d68112adca2b3d 337 Pfam PF00953 Glycosyl transferase family 4 65 218 8.8E-29 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 WS_RS10495 7f0e13a60eca019884fb5540fe12db77 204 SUPERFAMILY SSF69796 1 198 6.8E-51 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS10495 7f0e13a60eca019884fb5540fe12db77 204 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 1 203 23.446 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS10495 7f0e13a60eca019884fb5540fe12db77 204 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 12 198 8.4E-53 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS10495 7f0e13a60eca019884fb5540fe12db77 204 Pfam PF02511 Thymidylate synthase complementing protein 5 191 1.5E-47 T 11-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 WS_RS08095 71e236903f2c9ea80d75ebc1d8771e9e 356 Gene3D G3DSA:3.40.50.300 27 90 4.4E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS06605 9ad2bc455b63bdc062af41c1357d789d 100 Pfam PF03206 Nitrogen fixation protein NifW 3 82 4.3E-19 T 11-11-2016 IPR004893 Nitrogen fixation protein NifW GO:0009399 WS_RS01840 31fcea18e641eafe989991cc494753ec 167 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 156 1.4E-25 T 11-11-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component WS_RS02395 e855f044bd4a886d01da41bdf60c43c1 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.545 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 WS_RS02395 e855f044bd4a886d01da41bdf60c43c1 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 95 5.4E-24 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 WS_RS05270 911c96569c20ea6e70af0f78361e85cb 197 Pfam PF04335 VirB8 protein 7 190 1.1E-26 T 11-11-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 WS_RS05270 911c96569c20ea6e70af0f78361e85cb 197 SUPERFAMILY SSF54427 59 190 1.88E-26 T 11-11-2016 IPR032710 NTF2-like domain WS_RS03185 7d2b3814e15ad9b98d61b6f5e6c16c73 569 SUPERFAMILY SSF52091 453 555 9.61E-16 T 11-11-2016 IPR002645 STAS domain WS_RS03185 7d2b3814e15ad9b98d61b6f5e6c16c73 569 TIGRFAM TIGR00815 sulP: sulfate permease 14 551 7.0E-125 T 11-11-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 WS_RS03185 7d2b3814e15ad9b98d61b6f5e6c16c73 569 Pfam PF01740 STAS domain 451 551 2.8E-14 T 11-11-2016 IPR002645 STAS domain WS_RS03185 7d2b3814e15ad9b98d61b6f5e6c16c73 569 Gene3D G3DSA:3.30.750.24 453 555 2.4E-14 T 11-11-2016 IPR002645 STAS domain WS_RS03185 7d2b3814e15ad9b98d61b6f5e6c16c73 569 Pfam PF00916 Sulfate permease family 25 387 1.1E-87 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 WS_RS07365 5a0e1735013bf932ebcf744f72917bdb 165 SUPERFAMILY SSF52833 2 165 3.1E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS07365 5a0e1735013bf932ebcf744f72917bdb 165 Pfam PF08534 Redoxin 49 149 3.3E-7 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 WS_RS07365 5a0e1735013bf932ebcf744f72917bdb 165 Gene3D G3DSA:3.40.30.10 3 165 1.3E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03645 5dc15d275b703ea01390c42137347aa5 131 Gene3D G3DSA:3.40.30.10 18 128 3.4E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03645 5dc15d275b703ea01390c42137347aa5 131 SUPERFAMILY SSF52833 41 129 8.8E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 Pfam PF05239 PRC-barrel domain 91 149 1.6E-4 T 11-11-2016 IPR027275 PRC-barrel domain WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 SUPERFAMILY SSF50447 3 79 2.37E-10 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 SUPERFAMILY SSF50346 93 164 4.32E-11 T 11-11-2016 IPR011033 PRC-barrel-like WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 Gene3D G3DSA:2.40.30.60 2 78 1.8E-10 T 11-11-2016 IPR002676 RimM protein GO:0006364 WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 Pfam PF01782 RimM N-terminal domain 5 78 5.3E-13 T 11-11-2016 IPR002676 RimM protein GO:0006364 WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 169 18.538 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 166 2.5E-32 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 WS_RS02695 55eb09f55c0b64452dd4aaa0b05d7eb3 173 Gene3D G3DSA:2.30.30.240 94 163 7.0E-11 T 11-11-2016 WS_RS10445 9696cdcbb10ed562b9a1524b4a3165b8 221 Gene3D G3DSA:3.90.1720.10 58 160 5.9E-7 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain WS_RS00790 a0d2a4dff69f6261c1e0e486a72474b2 244 Pfam PF00459 Inositol monophosphatase family 41 212 7.9E-7 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 WS_RS00790 a0d2a4dff69f6261c1e0e486a72474b2 244 Gene3D G3DSA:3.30.540.10 7 123 1.2E-15 T 11-11-2016 WS_RS00790 a0d2a4dff69f6261c1e0e486a72474b2 244 SUPERFAMILY SSF56655 2 240 9.69E-29 T 11-11-2016 WS_RS04730 277ff8cfc95caaee496ffa09fb22efab 394 Pfam PF03573 outer membrane porin, OprD family 114 181 9.5E-7 T 11-11-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 WS_RS04730 277ff8cfc95caaee496ffa09fb22efab 394 SUPERFAMILY SSF56935 314 394 1.28E-5 T 11-11-2016 WS_RS04730 277ff8cfc95caaee496ffa09fb22efab 394 SUPERFAMILY SSF56935 209 287 1.28E-5 T 11-11-2016 WS_RS04730 277ff8cfc95caaee496ffa09fb22efab 394 SUPERFAMILY SSF56935 37 167 1.28E-5 T 11-11-2016 WS_RS04730 277ff8cfc95caaee496ffa09fb22efab 394 Gene3D G3DSA:2.40.160.10 33 394 1.1E-41 T 11-11-2016 IPR023614 Porin domain WS_RS09355 a74a4aea347a479cdc533a797377ee2a 51 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 51 14.504 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS09355 a74a4aea347a479cdc533a797377ee2a 51 Pfam PF01783 Ribosomal L32p protein family 2 50 1.2E-10 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS09355 a74a4aea347a479cdc533a797377ee2a 51 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 50 4.1E-14 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 WS_RS09355 a74a4aea347a479cdc533a797377ee2a 51 SUPERFAMILY SSF57829 1 49 4.58E-11 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 WS_RS00135 11463ef0c12892610bc58d64d86d0d84 262 Gene3D G3DSA:3.40.140.10 128 262 2.4E-44 T 11-11-2016 WS_RS00135 11463ef0c12892610bc58d64d86d0d84 262 SUPERFAMILY SSF53927 19 262 1.83E-67 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 WS_RS00135 11463ef0c12892610bc58d64d86d0d84 262 Gene3D G3DSA:3.10.20.10 32 114 1.0E-18 T 11-11-2016 WS_RS00135 11463ef0c12892610bc58d64d86d0d84 262 PIRSF PIRSF015626 1 262 4.2E-88 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS00135 11463ef0c12892610bc58d64d86d0d84 262 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 26 262 4.3E-55 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS00135 11463ef0c12892610bc58d64d86d0d84 262 Pfam PF02634 FdhD/NarQ family 30 262 9.7E-71 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS00135 11463ef0c12892610bc58d64d86d0d84 262 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 5 262 28.563 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 WS_RS00035 f52096a4f727c1c3b6091e87c057fc01 651 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 49 492 4.2E-166 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 WS_RS00035 f52096a4f727c1c3b6091e87c057fc01 651 ProSitePatterns PS01303 BCCT family of transporters signature. 311 320 - T 11-11-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 WS_RS00035 f52096a4f727c1c3b6091e87c057fc01 651 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 11 492 3.0E-198 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 WS_RS02515 5c875e30af9213ddb687b0706440762a 141 Pfam PF00430 ATP synthase B/B' CF(0) 11 106 1.7E-13 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 WS_RS04115 8dbe4548930379675031269feed635f3 545 SMART SM00283 283 544 7.0E-59 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04115 8dbe4548930379675031269feed635f3 545 SUPERFAMILY SSF58104 259 545 1.48E-59 T 11-11-2016 WS_RS04115 8dbe4548930379675031269feed635f3 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 542 3.2E-41 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS04115 8dbe4548930379675031269feed635f3 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 175 1.9E-14 T 11-11-2016 IPR024478 4HB MCP domain WS_RS04115 8dbe4548930379675031269feed635f3 545 Gene3D G3DSA:1.10.287.950 298 514 9.2E-47 T 11-11-2016 WS_RS03420 290af54e41fca0b4395e7f35bc699ea6 120 Gene3D G3DSA:1.10.760.10 15 100 1.3E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03420 290af54e41fca0b4395e7f35bc699ea6 120 SUPERFAMILY SSF46626 1 66 7.5E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03420 290af54e41fca0b4395e7f35bc699ea6 120 Pfam PF00034 Cytochrome c 31 90 5.3E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS06455 53e13b1a1c51207516d908e9956820c3 186 Pfam PF09335 SNARE associated Golgi protein 27 145 1.0E-15 T 11-11-2016 IPR032816 SNARE associated Golgi protein WS_RS09940 f33bfa840a58a63801ab73e139e646ca 281 Gene3D G3DSA:3.40.50.2000 178 264 1.5E-6 T 11-11-2016 WS_RS09940 f33bfa840a58a63801ab73e139e646ca 281 SUPERFAMILY SSF53756 169 280 8.85E-10 T 11-11-2016 WS_RS04015 5d3c0bd539fa3ea283746357de0b30e5 124 Gene3D G3DSA:1.10.10.10 2 109 5.8E-37 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS04015 5d3c0bd539fa3ea283746357de0b30e5 124 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 83 5.6E-12 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 WS_RS04015 5d3c0bd539fa3ea283746357de0b30e5 124 SUPERFAMILY SSF46785 3 105 2.0E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS02670 ad9dced0a61503e72815594e3824573f 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 173 201 6.6E-7 T 11-11-2016 IPR003004 GspF/PilC family WS_RS02670 ad9dced0a61503e72815594e3824573f 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 391 6.6E-7 T 11-11-2016 IPR003004 GspF/PilC family WS_RS02670 ad9dced0a61503e72815594e3824573f 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 393 412 6.6E-7 T 11-11-2016 IPR003004 GspF/PilC family WS_RS02670 ad9dced0a61503e72815594e3824573f 415 PRINTS PR00812 Bacterial general secretion pathway protein F signature 74 86 6.6E-7 T 11-11-2016 IPR003004 GspF/PilC family WS_RS02670 ad9dced0a61503e72815594e3824573f 415 Pfam PF00482 Type II secretion system (T2SS), protein F 79 201 1.2E-21 T 11-11-2016 IPR018076 Type II secretion system F domain WS_RS02670 ad9dced0a61503e72815594e3824573f 415 Pfam PF00482 Type II secretion system (T2SS), protein F 283 404 4.2E-26 T 11-11-2016 IPR018076 Type II secretion system F domain WS_RS03490 31854f6e002e5c12c8743de330eb08cd 283 Gene3D G3DSA:3.40.710.10 12 267 6.8E-73 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS03490 31854f6e002e5c12c8743de330eb08cd 283 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 253 3.1E-51 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 WS_RS03490 31854f6e002e5c12c8743de330eb08cd 283 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 9.5E-14 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 WS_RS03490 31854f6e002e5c12c8743de330eb08cd 283 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 9.5E-14 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 WS_RS03490 31854f6e002e5c12c8743de330eb08cd 283 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 9.5E-14 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 WS_RS03490 31854f6e002e5c12c8743de330eb08cd 283 SUPERFAMILY SSF56601 2 267 4.91E-61 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like WS_RS05670 fcccdf43d7c5a62c8d947efea8992374 93 Pfam PF00872 Transposase, Mutator family 22 91 4.1E-12 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 WS_RS08200 ec877a6dcc472e112a2192b247a99937 251 Pfam PF03649 Uncharacterised protein family (UPF0014) 14 244 1.2E-50 T 11-11-2016 IPR005226 UPF0014 family WS_RS07905 6daed2fce32ebc52625b25f7aac6f92b 341 Pfam PF13180 PDZ domain 168 242 1.8E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS07905 6daed2fce32ebc52625b25f7aac6f92b 341 Gene3D G3DSA:2.30.42.10 195 243 5.5E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS07905 6daed2fce32ebc52625b25f7aac6f92b 341 SUPERFAMILY SSF50156 194 246 7.99E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 WS_RS07820 553c9e7fcc3747dd009c3f0c546401a4 579 SUPERFAMILY SSF52540 332 538 2.45E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07820 553c9e7fcc3747dd009c3f0c546401a4 579 SMART SM00382 357 496 3.9E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain WS_RS07820 553c9e7fcc3747dd009c3f0c546401a4 579 Gene3D G3DSA:3.40.50.300 303 527 1.4E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS07820 553c9e7fcc3747dd009c3f0c546401a4 579 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 361 493 3.2E-29 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 WS_RS09685 1b17e80837713f42790c951b9c4bc9dc 199 Gene3D G3DSA:1.25.60.10 71 168 4.9E-5 T 11-11-2016 WS_RS09685 1b17e80837713f42790c951b9c4bc9dc 199 SUPERFAMILY SSF158791 73 168 7.32E-8 T 11-11-2016 WS_RS09685 1b17e80837713f42790c951b9c4bc9dc 199 Pfam PF03448 MgtE intracellular N domain 85 169 2.7E-6 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain WS_RS01650 fe1dfe7300cd933832e4ccc5b4c1eed7 74 Pfam PF04325 Protein of unknown function (DUF465) 19 64 2.1E-15 T 11-11-2016 IPR007420 Protein of unknown function DUF465 WS_RS04660 8c982b5b3cb70672d99c610c7847bdd8 902 Pfam PF01578 Cytochrome C assembly protein 658 860 4.3E-37 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 WS_RS04660 8c982b5b3cb70672d99c610c7847bdd8 902 Pfam PF05140 ResB-like family 214 285 7.5E-12 T 11-11-2016 IPR007816 ResB-like domain WS_RS04435 15163bb7ab1f386ef53aa690182eb416 151 Pfam PF05573 NosL 16 141 8.0E-7 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL WS_RS04435 15163bb7ab1f386ef53aa690182eb416 151 SUPERFAMILY SSF160387 53 145 9.68E-12 T 11-11-2016 WS_RS06960 d6f68ba10ba367910a42fd9ac2c6afef 248 Gene3D G3DSA:3.40.50.1010 5 146 2.6E-31 T 11-11-2016 IPR029060 PIN domain-like WS_RS06960 d6f68ba10ba367910a42fd9ac2c6afef 248 Pfam PF01936 NYN domain 11 144 3.2E-33 T 11-11-2016 IPR021139 NYN domain, limkain-b1-type WS_RS06960 d6f68ba10ba367910a42fd9ac2c6afef 248 Pfam PF12872 OST-HTH/LOTUS domain 171 232 2.1E-13 T 11-11-2016 IPR025605 OST-HTH/LOTUS domain WS_RS06135 fb18cf2a5dc0003435988c0f89e3932b 271 SUPERFAMILY SSF109998 23 160 1.88E-20 T 11-11-2016 IPR027304 Trigger factor/SurA domain WS_RS06135 fb18cf2a5dc0003435988c0f89e3932b 271 SUPERFAMILY SSF54534 124 225 1.11E-27 T 11-11-2016 WS_RS06135 fb18cf2a5dc0003435988c0f89e3932b 271 Pfam PF13616 PPIC-type PPIASE domain 118 228 1.2E-23 T 11-11-2016 WS_RS06135 fb18cf2a5dc0003435988c0f89e3932b 271 Gene3D G3DSA:3.10.50.40 124 251 5.5E-42 T 11-11-2016 WS_RS10140 92c0da83a6512950361f44014edfddc6 262 SMART SM00047 72 221 1.8E-4 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 WS_RS10140 92c0da83a6512950361f44014edfddc6 262 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 105 232 8.9E-17 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 WS_RS02845 889731cf36614ce2509a679e8bcad75a 162 Gene3D G3DSA:3.40.30.10 2 158 1.1E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS02845 889731cf36614ce2509a679e8bcad75a 162 Pfam PF00578 AhpC/TSA family 30 142 2.2E-20 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 WS_RS02845 889731cf36614ce2509a679e8bcad75a 162 ProSitePatterns PS00194 Thioredoxin family active site. 55 73 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 WS_RS02845 889731cf36614ce2509a679e8bcad75a 162 SUPERFAMILY SSF52833 25 149 2.03E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS03150 1e836ce9814750457d5c5fc4818aef69 541 Gene3D G3DSA:1.10.287.950 302 516 1.0E-39 T 11-11-2016 WS_RS03150 1e836ce9814750457d5c5fc4818aef69 541 SMART SM00283 279 540 8.7E-29 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS03150 1e836ce9814750457d5c5fc4818aef69 541 SUPERFAMILY SSF58104 232 541 1.44E-49 T 11-11-2016 WS_RS03150 1e836ce9814750457d5c5fc4818aef69 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 536 2.6E-32 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 WS_RS09150 46b5769d3156d6405387ff261c5b3059 666 SUPERFAMILY SSF103190 84 225 6.83E-5 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS09150 46b5769d3156d6405387ff261c5b3059 666 Gene3D G3DSA:3.30.450.20 460 546 1.8E-4 T 11-11-2016 WS_RS03170 82c37faecfa4db39540f213d2d744bda 220 Pfam PF02361 Cobalt transport protein 65 184 6.5E-8 T 11-11-2016 IPR003339 ABC/ECF transporter, transmembrane component WS_RS02440 08ec985d1a23acbd303dae053690daec 184 Hamap MF_01151 Protein GrpE [grpE]. 2 182 20.717 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 Gene3D G3DSA:3.90.20.20 32 126 3.3E-27 T 11-11-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 SUPERFAMILY SSF51064 134 183 2.09E-17 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 SUPERFAMILY SSF58014 32 127 9.15E-25 T 11-11-2016 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 PRINTS PR00773 GrpE protein signature 161 180 3.8E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 PRINTS PR00773 GrpE protein signature 134 149 3.8E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 PRINTS PR00773 GrpE protein signature 48 64 3.8E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 PRINTS PR00773 GrpE protein signature 76 91 3.8E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 Gene3D G3DSA:2.30.22.10 127 183 7.7E-25 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 WS_RS02440 08ec985d1a23acbd303dae053690daec 184 Pfam PF01025 GrpE 17 182 2.1E-51 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 WS_RS00820 6e2f625626ecb0e690bb1116d3789f7a 104 Gene3D G3DSA:2.60.120.10 10 102 3.8E-38 T 11-11-2016 IPR014710 RmlC-like jelly roll fold WS_RS00820 6e2f625626ecb0e690bb1116d3789f7a 104 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 103 29.177 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 WS_RS00820 6e2f625626ecb0e690bb1116d3789f7a 104 SUPERFAMILY SSF51182 10 102 6.85E-36 T 11-11-2016 IPR011051 RmlC-like cupin domain WS_RS00820 6e2f625626ecb0e690bb1116d3789f7a 104 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 1.6E-38 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 WS_RS10125 147e5e66008ae0f66836fac2012eadb6 262 SUPERFAMILY SSF53335 2 257 2.23E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10125 147e5e66008ae0f66836fac2012eadb6 262 Pfam PF01564 Spermine/spermidine synthase 11 197 2.3E-18 T 11-11-2016 WS_RS10125 147e5e66008ae0f66836fac2012eadb6 262 Gene3D G3DSA:3.40.50.150 61 257 1.4E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10125 147e5e66008ae0f66836fac2012eadb6 262 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 1 257 20.642 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 WS_RS05700 f168a6e686098f8b6ca7cce00da1ec5b 83 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 6 70 1.9E-11 T 11-11-2016 IPR018720 Domain of unknown function DUF2249 WS_RS05515 933572396a2a7bebb2c9cd605b81e7f4 195 Pfam PF02169 LPP20 lipoprotein 43 146 1.2E-6 T 11-11-2016 IPR024952 Lipoprotein LPP20-like WS_RS06720 f9ba179be966f59688d278e6803cc42e 398 Pfam PF03929 PepSY-associated TM region 6 380 2.5E-55 T 11-11-2016 IPR005625 PepSY-associated TM protein WS_RS09035 76707a6179d191a464701fc44388534f 284 Pfam PF02754 Cysteine-rich domain 6 86 6.8E-13 T 11-11-2016 IPR004017 Cysteine-rich domain WS_RS09035 76707a6179d191a464701fc44388534f 284 Pfam PF02754 Cysteine-rich domain 145 235 3.1E-15 T 11-11-2016 IPR004017 Cysteine-rich domain WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 6 743 20.228 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 Pfam PF07244 Surface antigen variable number repeat 263 341 1.7E-9 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 Pfam PF07244 Surface antigen variable number repeat 89 166 1.2E-10 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 Pfam PF07244 Surface antigen variable number repeat 344 416 1.1E-11 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 Pfam PF07244 Surface antigen variable number repeat 170 259 8.8E-6 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 Pfam PF01103 Surface antigen 443 743 7.4E-66 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 PIRSF PIRSF006076 2 743 4.6E-208 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 Gene3D G3DSA:2.40.160.50 408 743 2.8E-16 T 11-11-2016 WS_RS01740 58ce23dbf6689ede7676d33367fe0171 743 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 21 743 3.3E-192 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 WS_RS00930 250b0c4cc42acdd490af0341f7dd959f 66 Pfam PF13179 Family of unknown function (DUF4006) 1 61 9.2E-26 T 11-11-2016 IPR025065 Protein of unknown function DUF4006 WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 253 1.1E-55 T 11-11-2016 WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 SUPERFAMILY SSF51735 2 254 8.12E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.1E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.1E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.1E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.1E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.1E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.1E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR WS_RS10465 6ffa5222113aa2a081868c342971d93f 256 Gene3D G3DSA:3.40.50.720 2 254 1.2E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10470 2d5df109fa760d7718788c2220cab2f0 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 WS_RS10470 2d5df109fa760d7718788c2220cab2f0 180 PIRSF PIRSF000847 1 180 1.0E-44 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 WS_RS10470 2d5df109fa760d7718788c2220cab2f0 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 79 1.9E-18 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 WS_RS10470 2d5df109fa760d7718788c2220cab2f0 180 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 179 1.5E-46 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 WS_RS02580 2e294f24c4d4bac291e2a46d2dae7b45 185 SUPERFAMILY SSF54534 14 151 1.08E-36 T 11-11-2016 WS_RS02580 2e294f24c4d4bac291e2a46d2dae7b45 185 Gene3D G3DSA:3.10.50.40 15 80 1.6E-20 T 11-11-2016 WS_RS02580 2e294f24c4d4bac291e2a46d2dae7b45 185 Gene3D G3DSA:3.10.50.40 133 149 1.6E-20 T 11-11-2016 WS_RS02580 2e294f24c4d4bac291e2a46d2dae7b45 185 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 14 147 9.2E-15 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 WS_RS08270 53eef03bf6de74d14cf8323494fc6eda 666 Pfam PF01973 Protein of unknown function DUF115 270 435 7.2E-34 T 11-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like WS_RS04280 2f46254193b4d3814a92c0df8c3a5257 700 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 2 693 14.607 T 11-11-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 WS_RS04280 2f46254193b4d3814a92c0df8c3a5257 700 Pfam PF04453 Organic solvent tolerance protein 280 487 2.4E-9 T 11-11-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 WS_RS04280 2f46254193b4d3814a92c0df8c3a5257 700 Gene3D G3DSA:2.60.450.10 23 167 6.7E-7 T 11-11-2016 WS_RS01555 4adcf846137d136c9a1fc55bdcd04f01 163 Pfam PF06271 RDD family 28 149 5.3E-17 T 11-11-2016 IPR010432 RDD WS_RS05740 e87a9eda03c09328ae5cdeb2ca74527a 174 SMART SM00852 5 151 2.2E-27 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05740 e87a9eda03c09328ae5cdeb2ca74527a 174 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 145 2.2E-40 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05740 e87a9eda03c09328ae5cdeb2ca74527a 174 Gene3D G3DSA:3.40.980.10 2 162 1.6E-55 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05740 e87a9eda03c09328ae5cdeb2ca74527a 174 Pfam PF00994 Probable molybdopterin binding domain 5 149 4.3E-30 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS05740 e87a9eda03c09328ae5cdeb2ca74527a 174 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 67 80 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 WS_RS05740 e87a9eda03c09328ae5cdeb2ca74527a 174 SUPERFAMILY SSF53218 1 172 8.77E-47 T 11-11-2016 IPR001453 MoaB/Mog domain WS_RS07885 2e11db702b19e69d80201de3072f9fe6 290 Gene3D G3DSA:3.60.110.10 1 286 1.6E-96 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS07885 2e11db702b19e69d80201de3072f9fe6 290 Pfam PF00795 Carbon-nitrogen hydrolase 2 268 8.0E-52 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS07885 2e11db702b19e69d80201de3072f9fe6 290 SUPERFAMILY SSF56317 1 286 8.76E-81 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 WS_RS10770 bf9846bd941a2e68f39d2c1d69ff5fac 220 Gene3D G3DSA:3.40.50.2300 10 133 2.0E-32 T 11-11-2016 WS_RS10770 bf9846bd941a2e68f39d2c1d69ff5fac 220 SUPERFAMILY SSF52172 10 141 9.25E-32 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS10770 bf9846bd941a2e68f39d2c1d69ff5fac 220 Pfam PF00072 Response regulator receiver domain 12 120 7.9E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS10770 bf9846bd941a2e68f39d2c1d69ff5fac 220 SMART SM00448 10 121 1.5E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 WS_RS03830 67acffb64babd53cb6d79e0c43a6b1f7 356 SUPERFAMILY SSF53756 77 347 2.83E-7 T 11-11-2016 WS_RS03830 67acffb64babd53cb6d79e0c43a6b1f7 356 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 314 7.3E-80 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 WS_RS03830 67acffb64babd53cb6d79e0c43a6b1f7 356 Pfam PF02684 Lipid-A-disaccharide synthetase 4 307 2.7E-79 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 WS_RS09100 8ebd1ffa385598dfada3e143d0300586 246 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 45 114 1.9E-9 T 11-11-2016 IPR029095 NarX-like, N-terminal WS_RS10645 e3726e0c588dafceeef2c79a68513898 208 Pfam PF01863 Protein of unknown function DUF45 97 197 3.2E-34 T 11-11-2016 IPR002725 Protein of unknown function DUF45 WS_RS10645 e3726e0c588dafceeef2c79a68513898 208 Pfam PF01863 Protein of unknown function DUF45 17 88 4.5E-5 T 11-11-2016 IPR002725 Protein of unknown function DUF45 WS_RS00750 5f180eff39b20fff61d88e183265567d 682 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 108 3.3E-12 T 11-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 WS_RS00750 5f180eff39b20fff61d88e183265567d 682 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 435 667 1.2E-48 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 WS_RS09960 fcd3b76952294b8c3b31b0c23fec4f4e 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 267 19.091 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 WS_RS09960 fcd3b76952294b8c3b31b0c23fec4f4e 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 150 162 - T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 WS_RS09960 fcd3b76952294b8c3b31b0c23fec4f4e 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 12 260 2.5E-69 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 WS_RS09960 fcd3b76952294b8c3b31b0c23fec4f4e 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 267 3.8E-73 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 WS_RS08615 ca688d757e13f0cac39af40837d30ec0 205 Gene3D G3DSA:3.40.50.10420 2 146 6.6E-6 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain WS_RS08615 ca688d757e13f0cac39af40837d30ec0 205 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 6 199 2.9E-51 T 11-11-2016 IPR003741 LUD domain WS_RS08615 ca688d757e13f0cac39af40837d30ec0 205 PIRSF PIRSF020269 1 205 2.8E-85 T 11-11-2016 IPR009501 Uncharacterised conserved protein UCP020269 WS_RS09245 407419cb2cafb4d835d5c007616273ae 440 Pfam PF13432 Tetratricopeptide repeat 30 86 1.4E-9 T 11-11-2016 WS_RS09245 407419cb2cafb4d835d5c007616273ae 440 SUPERFAMILY SSF48452 29 120 7.82E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS09245 407419cb2cafb4d835d5c007616273ae 440 Gene3D G3DSA:1.25.40.10 29 120 6.1E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08380 82ab32c687e297501f8e8ddd5ca71603 441 Pfam PF05538 Campylobacter major outer membrane protein 1 441 3.7E-86 T 11-11-2016 IPR008439 Campylobacter major outer membrane WS_RS08380 82ab32c687e297501f8e8ddd5ca71603 441 SUPERFAMILY SSF56935 83 185 2.13E-15 T 11-11-2016 WS_RS08380 82ab32c687e297501f8e8ddd5ca71603 441 SUPERFAMILY SSF56935 27 53 2.13E-15 T 11-11-2016 WS_RS08380 82ab32c687e297501f8e8ddd5ca71603 441 SUPERFAMILY SSF56935 222 309 2.13E-15 T 11-11-2016 WS_RS08380 82ab32c687e297501f8e8ddd5ca71603 441 SUPERFAMILY SSF56935 347 441 2.13E-15 T 11-11-2016 WS_RS03635 3dbe090125f32fb69ad8eb50a41caa41 234 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 20 201 7.9E-14 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 WS_RS03500 edfc242a489fbbe7693c90f29b946cb4 169 PIRSF PIRSF500176 1 169 1.5E-18 T 11-11-2016 WS_RS03500 edfc242a489fbbe7693c90f29b946cb4 169 SUPERFAMILY SSF53774 2 164 3.66E-27 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03500 edfc242a489fbbe7693c90f29b946cb4 169 Pfam PF00710 Asparaginase, N-terminal 2 163 4.3E-20 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 WS_RS03500 edfc242a489fbbe7693c90f29b946cb4 169 Gene3D G3DSA:3.40.50.1170 2 164 1.2E-23 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 WS_RS03500 edfc242a489fbbe7693c90f29b946cb4 169 PRINTS PR00139 Asparaginase/glutaminase family signature 76 94 7.1E-6 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03500 edfc242a489fbbe7693c90f29b946cb4 169 PRINTS PR00139 Asparaginase/glutaminase family signature 2 13 7.1E-6 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS03500 edfc242a489fbbe7693c90f29b946cb4 169 PIRSF PIRSF001220 1 169 3.7E-17 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 WS_RS04760 9332cd9751fd44a9df9e54ea1c057545 433 TIGRFAM TIGR00797 matE: MATE efflux family protein 12 406 4.0E-71 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS04760 9332cd9751fd44a9df9e54ea1c057545 433 Pfam PF01554 MatE 238 388 5.3E-13 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS04760 9332cd9751fd44a9df9e54ea1c057545 433 Pfam PF01554 MatE 12 173 1.4E-17 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS03425 68c49c99cf88fdcdcb3a4dbe7367c2e5 395 Pfam PF03916 Polysulphide reductase, NrfD 61 344 3.5E-26 T 11-11-2016 IPR005614 NrfD family WS_RS03260 201b17c75b65218d1595256d154963d2 155 SUPERFAMILY SSF54637 33 135 9.61E-16 T 11-11-2016 IPR029069 HotDog domain WS_RS03260 201b17c75b65218d1595256d154963d2 155 Gene3D G3DSA:3.10.129.10 33 144 1.8E-20 T 11-11-2016 IPR029069 HotDog domain WS_RS07085 59ec85b12f9692b0cae5be5f6a3642d0 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 85 1.4E-30 T 11-11-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 WS_RS07085 59ec85b12f9692b0cae5be5f6a3642d0 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 38 53 4.2E-24 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 WS_RS07085 59ec85b12f9692b0cae5be5f6a3642d0 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 53 75 4.2E-24 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 WS_RS07085 59ec85b12f9692b0cae5be5f6a3642d0 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 17 38 4.2E-24 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 WS_RS07085 59ec85b12f9692b0cae5be5f6a3642d0 88 PIRSF PIRSF004669 1 87 1.2E-30 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 WS_RS07085 59ec85b12f9692b0cae5be5f6a3642d0 88 Pfam PF01313 Bacterial export proteins, family 3 6 76 1.2E-28 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 WS_RS07635 e6907f1ed89476a022a1698c71403d7d 443 Pfam PF05670 Domain of unknown function (DUF814) 343 423 2.3E-12 T 11-11-2016 IPR008532 Domain of unknown function DUF814 WS_RS07635 e6907f1ed89476a022a1698c71403d7d 443 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 171 320 1.0E-7 T 11-11-2016 WS_RS07635 e6907f1ed89476a022a1698c71403d7d 443 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 65 157 2.8E-9 T 11-11-2016 WS_RS07635 e6907f1ed89476a022a1698c71403d7d 443 Gene3D G3DSA:2.30.310.10 60 154 1.1E-14 T 11-11-2016 WS_RS09560 34ad1310dce906c1719917658176ca6e 64 Gene3D G3DSA:1.10.10.10 19 59 4.7E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain WS_RS07330 29689e016ecb07ba35c1789b3ffed7bf 314 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 53 292 4.1E-58 T 11-11-2016 WS_RS07330 29689e016ecb07ba35c1789b3ffed7bf 314 Gene3D G3DSA:3.40.190.10 138 238 4.2E-13 T 11-11-2016 WS_RS07330 29689e016ecb07ba35c1789b3ffed7bf 314 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 269 1.3E-81 T 11-11-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 WS_RS07330 29689e016ecb07ba35c1789b3ffed7bf 314 SUPERFAMILY SSF53850 49 310 9.37E-47 T 11-11-2016 WS_RS09255 ca5ded6be24e33d12eaac53bbd7d61f8 264 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 18 260 1.8E-66 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria WS_RS09255 ca5ded6be24e33d12eaac53bbd7d61f8 264 Pfam PF02405 Permease MlaE 49 257 4.2E-72 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 WS_RS03010 f81bb8cfed40261f74cc0ff0bec4733d 301 Gene3D G3DSA:3.30.450.20 38 137 6.7E-22 T 11-11-2016 WS_RS03010 f81bb8cfed40261f74cc0ff0bec4733d 301 SUPERFAMILY SSF103190 47 140 9.81E-18 T 11-11-2016 IPR029151 Periplasmic sensor domain-like WS_RS03745 b14fe21d6ae4078e80bbad914c24d6ef 65 Pfam PF11127 Protein of unknown function (DUF2892) 1 59 2.6E-20 T 11-11-2016 IPR021309 Protein of unknown function DUF2892 WS_RS08685 fc25e12290caa8ed051d2a51a4bba160 248 Gene3D G3DSA:3.40.30.10 134 245 4.7E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS08685 fc25e12290caa8ed051d2a51a4bba160 248 SUPERFAMILY SSF52833 113 245 4.47E-9 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS10680 19b00c6965b9bd6e0f95eb8df4e8ae39 96 Pfam PF13682 Chemoreceptor zinc-binding domain 6 48 4.7E-13 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain WS_RS04415 b64265d9883363edc58cc5ba0afb2c37 184 SUPERFAMILY SSF46626 107 176 1.04E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04415 b64265d9883363edc58cc5ba0afb2c37 184 Gene3D G3DSA:1.10.760.10 108 173 1.7E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03135 390955ddfecb5285669a7ebcfde18f22 118 Gene3D G3DSA:1.10.3830.10 5 117 1.3E-33 T 11-11-2016 WS_RS03135 390955ddfecb5285669a7ebcfde18f22 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 12 113 3.2E-29 T 11-11-2016 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 WS_RS03135 390955ddfecb5285669a7ebcfde18f22 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 66 77 - T 11-11-2016 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 WS_RS07440 7cca37b43ed49d3373c306a39a79e3d5 225 Pfam PF02915 Rubrerythrin 19 128 9.3E-5 T 11-11-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 WS_RS07440 7cca37b43ed49d3373c306a39a79e3d5 225 SUPERFAMILY SSF47240 10 129 9.02E-17 T 11-11-2016 IPR009078 Ferritin-like superfamily WS_RS07440 7cca37b43ed49d3373c306a39a79e3d5 225 Gene3D G3DSA:1.20.1260.10 7 128 2.0E-11 T 11-11-2016 IPR012347 Ferritin-related WS_RS01915 335a4cca82ad52869a3f5a91af1b351e 349 SUPERFAMILY SSF160387 61 159 3.14E-25 T 11-11-2016 WS_RS01915 335a4cca82ad52869a3f5a91af1b351e 349 SUPERFAMILY SSF160387 252 348 2.62E-27 T 11-11-2016 WS_RS01915 335a4cca82ad52869a3f5a91af1b351e 349 Pfam PF05573 NosL 35 140 7.9E-12 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL WS_RS01915 335a4cca82ad52869a3f5a91af1b351e 349 Pfam PF05573 NosL 220 346 1.6E-32 T 11-11-2016 IPR008719 Nitrous oxide reductase accessory protein NosL WS_RS10310 31b2959d5d5d7fe4ba9eb628ed8d1ab5 318 SUPERFAMILY SSF51735 2 179 3.05E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10310 31b2959d5d5d7fe4ba9eb628ed8d1ab5 318 Gene3D G3DSA:3.40.50.720 2 208 1.9E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS10310 31b2959d5d5d7fe4ba9eb628ed8d1ab5 318 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 152 202 3.6E-10 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 WS_RS10310 31b2959d5d5d7fe4ba9eb628ed8d1ab5 318 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 125 1.3E-15 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 WS_RS03100 80da0ad29f678b85a623130f1b4c09a3 322 Pfam PF03595 Voltage-dependent anion channel 14 309 1.8E-54 T 11-11-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 WS_RS08925 712e32c660ddb9b564e37be923907289 139 SUPERFAMILY SSF53098 1 137 1.9E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS08925 712e32c660ddb9b564e37be923907289 139 Pfam PF00075 RNase H 2 135 1.8E-38 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 WS_RS08925 712e32c660ddb9b564e37be923907289 139 Gene3D G3DSA:3.30.420.10 2 138 4.8E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS07175 8c7c0feabf99d50106b90634ef6e10ea 177 SUPERFAMILY SSF53474 101 172 4.8E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS07175 8c7c0feabf99d50106b90634ef6e10ea 177 SUPERFAMILY SSF53474 20 67 4.8E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS07175 8c7c0feabf99d50106b90634ef6e10ea 177 Gene3D G3DSA:3.40.50.1820 17 170 6.5E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold WS_RS01690 4e34da1b5938ba2fe6d30bf2a5b9d8ef 253 SUPERFAMILY SSF52540 12 159 1.46E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01690 4e34da1b5938ba2fe6d30bf2a5b9d8ef 253 Gene3D G3DSA:3.40.50.300 23 155 1.6E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase WS_RS01690 4e34da1b5938ba2fe6d30bf2a5b9d8ef 253 Pfam PF05673 Protein of unknown function (DUF815) 7 248 1.8E-94 T 11-11-2016 IPR008533 Domain of unknown function DUF815 WS_RS07295 69ff888e536bc4d99d294eb5853fea71 137 Pfam PF07681 DoxX 18 97 1.3E-20 T 11-11-2016 IPR032808 DoxX family WS_RS10565 c901b241117a56a9bf7e602fb37ee9ee 293 Pfam PF03916 Polysulphide reductase, NrfD 3 287 2.1E-23 T 11-11-2016 IPR005614 NrfD family WS_RS04700 0ad479757809755a96ce54d3ad4cbbe2 169 Pfam PF00583 Acetyltransferase (GNAT) family 62 149 5.5E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 WS_RS04700 0ad479757809755a96ce54d3ad4cbbe2 169 Gene3D G3DSA:3.40.630.30 5 155 3.4E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS04700 0ad479757809755a96ce54d3ad4cbbe2 169 SUPERFAMILY SSF55729 15 153 2.36E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS06600 8927969c0c78d670e127b67791b56963 85 Pfam PF04319 NifZ domain 10 79 1.0E-27 T 11-11-2016 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 WS_RS00800 aa4e614c2e2acc529879ffd023d18704 279 Pfam PF09312 SurA N-terminal domain 49 122 1.1E-10 T 11-11-2016 IPR015391 SurA N-terminal WS_RS00800 aa4e614c2e2acc529879ffd023d18704 279 SUPERFAMILY SSF109998 23 177 1.39E-24 T 11-11-2016 IPR027304 Trigger factor/SurA domain WS_RS01230 34db2a95d012b946c7861ce8285c0f8a 427 Pfam PF04932 O-Antigen ligase 190 356 2.6E-14 T 11-11-2016 IPR007016 O-antigen ligase-related WS_RS09550 9373b84b420f494eb435c17eaf3bcc38 367 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 110 163 9.4E-5 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 WS_RS09550 9373b84b420f494eb435c17eaf3bcc38 367 Gene3D G3DSA:1.10.443.10 190 347 4.7E-22 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 WS_RS09550 9373b84b420f494eb435c17eaf3bcc38 367 Gene3D G3DSA:1.10.150.130 90 178 7.1E-11 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal WS_RS09550 9373b84b420f494eb435c17eaf3bcc38 367 SUPERFAMILY SSF56349 83 347 1.0E-44 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 WS_RS09550 9373b84b420f494eb435c17eaf3bcc38 367 Pfam PF00589 Phage integrase family 217 344 3.6E-14 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 WS_RS03005 37bee453faf9dfb969a1a2331f0f6d09 263 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 43 252 6.6E-73 T 11-11-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like WS_RS03005 37bee453faf9dfb969a1a2331f0f6d09 263 SUPERFAMILY SSF53098 41 220 9.87E-37 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS03005 37bee453faf9dfb969a1a2331f0f6d09 263 Gene3D G3DSA:3.30.420.10 2 214 4.7E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 WS_RS07815 25890e70cb07f57a7c43bc1bc4cec27d 180 SUPERFAMILY SSF55620 1 177 5.17E-26 T 11-11-2016 WS_RS07815 25890e70cb07f57a7c43bc1bc4cec27d 180 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 178 3.3E-36 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 WS_RS07815 25890e70cb07f57a7c43bc1bc4cec27d 180 Gene3D G3DSA:3.30.479.10 1 179 8.1E-33 T 11-11-2016 WS_RS03190 8a9e0972fae9668e45fdbfec4195a41a 182 Pfam PF08378 Nuclease-related domain 13 89 5.1E-5 T 11-11-2016 IPR011528 Nuclease-related domain, NERD WS_RS07670 717e6f0db8d84bd1aca9f816e154c2a0 149 SMART SM00450 46 146 1.8E-19 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS07670 717e6f0db8d84bd1aca9f816e154c2a0 149 Gene3D G3DSA:3.40.250.10 31 146 2.0E-29 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS07670 717e6f0db8d84bd1aca9f816e154c2a0 149 Pfam PF00581 Rhodanese-like domain 46 142 7.0E-13 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS07670 717e6f0db8d84bd1aca9f816e154c2a0 149 SUPERFAMILY SSF52821 27 147 1.09E-27 T 11-11-2016 IPR001763 Rhodanese-like domain WS_RS05175 cdab57410f0d304dfe42faf1af6a3cf5 158 Pfam PF01584 CheW-like domain 13 148 6.0E-33 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS05175 cdab57410f0d304dfe42faf1af6a3cf5 158 SUPERFAMILY SSF50341 6 149 6.15E-37 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS05175 cdab57410f0d304dfe42faf1af6a3cf5 158 SMART SM00260 8 145 3.2E-27 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 WS_RS05175 cdab57410f0d304dfe42faf1af6a3cf5 158 Gene3D G3DSA:2.40.50.180 50 96 3.1E-13 T 11-11-2016 WS_RS06145 c2ca63cad4efbbdff7e437f320b595a2 231 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 6 211 6.7E-18 T 11-11-2016 WS_RS07780 f32f63047a1496666a7192193050e97f 128 Gene3D G3DSA:2.30.290.10 2 124 3.8E-33 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain WS_RS07780 f32f63047a1496666a7192193050e97f 128 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 121 19.365 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 WS_RS07780 f32f63047a1496666a7192193050e97f 128 Pfam PF02623 FliW protein 4 114 2.1E-27 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 WS_RS07780 f32f63047a1496666a7192193050e97f 128 SUPERFAMILY SSF141457 2 115 6.28E-30 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain WS_RS01905 b6b49e2c84b83eafb6e6e8fce386e5a8 176 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 1.7E-43 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 WS_RS01905 b6b49e2c84b83eafb6e6e8fce386e5a8 176 PIRSF PIRSF004638 1 146 6.9E-38 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 WS_RS01490 97917d36c6782a89e287977e0a7055e9 403 Gene3D G3DSA:1.20.1600.10 59 196 7.2E-13 T 11-11-2016 WS_RS01490 97917d36c6782a89e287977e0a7055e9 403 Gene3D G3DSA:1.20.1600.10 221 374 1.1E-13 T 11-11-2016 WS_RS01490 97917d36c6782a89e287977e0a7055e9 403 Pfam PF02321 Outer membrane efflux protein 222 389 3.1E-12 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS01490 97917d36c6782a89e287977e0a7055e9 403 Pfam PF02321 Outer membrane efflux protein 34 197 3.4E-17 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 WS_RS01490 97917d36c6782a89e287977e0a7055e9 403 SUPERFAMILY SSF56954 59 397 1.44E-35 T 11-11-2016 WS_RS07115 6bffadbb4d689335c637a64ffe7ab79e 208 Pfam PF11741 AMIN domain 126 207 1.1E-9 T 11-11-2016 IPR021731 AMIN domain WS_RS04275 ba964794846e35538087c950c7bb40af 151 Pfam PF06271 RDD family 17 144 9.2E-21 T 11-11-2016 IPR010432 RDD WS_RS09210 e3192cc163bc15e5c9adcad3bca49411 248 SUPERFAMILY SSF52172 129 245 6.69E-10 T 11-11-2016 IPR011006 CheY-like superfamily WS_RS09210 e3192cc163bc15e5c9adcad3bca49411 248 Gene3D G3DSA:3.40.50.2300 131 245 3.5E-7 T 11-11-2016 WS_RS09925 55b799be23435471c5bd86acfd7dbbf4 150 Gene3D G3DSA:1.10.10.410 92 148 4.0E-19 T 11-11-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal WS_RS09925 55b799be23435471c5bd86acfd7dbbf4 150 Gene3D G3DSA:1.10.1510.10 3 91 1.9E-29 T 11-11-2016 WS_RS09925 55b799be23435471c5bd86acfd7dbbf4 150 SUPERFAMILY SSF89095 4 148 3.98E-37 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 WS_RS09925 55b799be23435471c5bd86acfd7dbbf4 150 Pfam PF09424 Yqey-like protein 5 147 5.7E-52 T 11-11-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial WS_RS05955 251ed8f55cda64cb5c6d2c0c6f3274f9 167 Pfam PF04390 Lipopolysaccharide-assembly 6 155 3.5E-11 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 WS_RS00635 1fcc9189122af62829b4c5a009d79862 145 Gene3D G3DSA:3.40.50.720 23 143 4.3E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00635 1fcc9189122af62829b4c5a009d79862 145 SMART SM00881 20 113 9.6E-11 T 11-11-2016 IPR003781 CoA-binding GO:0048037 WS_RS00635 1fcc9189122af62829b4c5a009d79862 145 SUPERFAMILY SSF51735 11 142 4.66E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain WS_RS00635 1fcc9189122af62829b4c5a009d79862 145 Pfam PF13380 CoA binding domain 24 140 8.4E-36 T 11-11-2016 IPR003781 CoA-binding GO:0048037 WS_RS02760 bed762a310ed4896c63fe08e27c19337 164 Pfam PF13664 Domain of unknown function (DUF4149) 18 123 9.3E-14 T 11-11-2016 IPR025423 Domain of unknown function DUF4149 WS_RS03245 34de476a4400ecd2470866985b1e5fe7 187 Gene3D G3DSA:3.40.630.30 1 186 3.1E-34 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS03245 34de476a4400ecd2470866985b1e5fe7 187 Pfam PF00583 Acetyltransferase (GNAT) family 63 166 1.9E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 WS_RS03245 34de476a4400ecd2470866985b1e5fe7 187 SUPERFAMILY SSF55729 6 184 1.38E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase WS_RS09445 9cb5b61930e48bf87850c2292628e2ee 123 Gene3D G3DSA:3.40.30.10 22 120 2.5E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS09445 9cb5b61930e48bf87850c2292628e2ee 123 SUPERFAMILY SSF52833 19 120 3.5E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold WS_RS09445 9cb5b61930e48bf87850c2292628e2ee 123 Pfam PF13899 Thioredoxin-like 22 99 2.5E-10 T 11-11-2016 WS_RS09260 21b2a956307bf31dfaa1d013234425c5 178 Pfam PF03748 Flagellar basal body-associated protein FliL 83 178 8.2E-25 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 WS_RS10285 540a0d0d5e750a64b51051b764dab524 222 Pfam PF13578 Methyltransferase domain 85 189 7.4E-16 T 11-11-2016 WS_RS10285 540a0d0d5e750a64b51051b764dab524 222 Gene3D G3DSA:3.40.50.150 61 202 1.5E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS10285 540a0d0d5e750a64b51051b764dab524 222 SUPERFAMILY SSF53335 73 202 1.07E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase WS_RS05565 c1ffd2988303282f4a2f9ad6a113c86c 432 Pfam PF09925 Predicted membrane protein (DUF2157) 15 154 1.8E-31 T 11-11-2016 IPR018677 Domain of unknown function DUF2157 WS_RS05135 bc75da41e98c8c896cd76ba881642f79 275 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 2.6E-35 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 WS_RS05135 bc75da41e98c8c896cd76ba881642f79 275 Gene3D G3DSA:3.40.50.970 16 225 1.3E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS05135 bc75da41e98c8c896cd76ba881642f79 275 SUPERFAMILY SSF52518 14 237 1.41E-67 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold WS_RS09915 586171075e9258a3db085dfda2887e13 113 SUPERFAMILY SSF57716 81 111 1.26E-8 T 11-11-2016 WS_RS09915 586171075e9258a3db085dfda2887e13 113 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 112 1.3E-11 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 WS_RS02940 05c70fec96190e577e0e952e5c3b8eb9 88 Pfam PF13937 Domain of unknown function (DUF4212) 10 86 1.2E-32 T 11-11-2016 IPR019886 Sodium symporter small subunit, predicted WS_RS02940 05c70fec96190e577e0e952e5c3b8eb9 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 6.8E-35 T 11-11-2016 IPR019886 Sodium symporter small subunit, predicted WS_RS03655 4ab78fb0f68fbaa3a8735e32cab17e05 148 SUPERFAMILY SSF52788 7 142 6.93E-37 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS03655 4ab78fb0f68fbaa3a8735e32cab17e05 148 Gene3D G3DSA:3.40.50.270 6 138 4.9E-39 T 11-11-2016 WS_RS03655 4ab78fb0f68fbaa3a8735e32cab17e05 148 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 134 1.3E-17 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS03655 4ab78fb0f68fbaa3a8735e32cab17e05 148 SMART SM00226 7 143 9.4E-42 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily WS_RS10610 bd6684183da11f1ab0f79ee0977c9303 295 SUPERFAMILY SSF88713 107 283 9.45E-10 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 WS_RS10610 bd6684183da11f1ab0f79ee0977c9303 295 Gene3D G3DSA:3.20.20.370 108 287 1.7E-8 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 WS_RS05265 52d4edab7ce45bfcf2f7ac0ade39454c 309 Pfam PF03524 Conjugal transfer protein 63 306 2.6E-38 T 11-11-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX WS_RS10540 e7d9b9e582e8f16153b8294ecb3a594f 208 Pfam PF08495 FIST N domain 45 206 2.4E-11 T 11-11-2016 IPR013702 FIST domain, N-terminal WS_RS10015 c940733cdce9208a39bfa2102ad0df93 423 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 WS_RS10015 c940733cdce9208a39bfa2102ad0df93 423 Pfam PF01136 Peptidase family U32 77 308 1.2E-79 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 WS_RS01430 6c2c1b3c7243ec7e9209e3c0d5e7b39c 197 Pfam PF09335 SNARE associated Golgi protein 33 159 1.3E-22 T 11-11-2016 IPR032816 SNARE associated Golgi protein WS_RS03470 83cc5ee50b91e5827ee36621a51be50c 135 Gene3D G3DSA:3.10.129.10 5 122 2.5E-34 T 11-11-2016 IPR029069 HotDog domain WS_RS03470 83cc5ee50b91e5827ee36621a51be50c 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 8 117 7.3E-21 T 11-11-2016 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 WS_RS03470 83cc5ee50b91e5827ee36621a51be50c 135 SUPERFAMILY SSF54637 5 122 2.96E-32 T 11-11-2016 IPR029069 HotDog domain WS_RS03470 83cc5ee50b91e5827ee36621a51be50c 135 Pfam PF03061 Thioesterase superfamily 39 111 6.1E-18 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 WS_RS09795 edf86d408758b05730e11d4f39e60221 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 351 9.0E-38 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 WS_RS04000 c5627eb20ad69cec7dd827a5061fa34f 138 Pfam PF00582 Universal stress protein family 1 138 1.4E-21 T 11-11-2016 IPR006016 UspA GO:0006950 WS_RS04000 c5627eb20ad69cec7dd827a5061fa34f 138 SUPERFAMILY SSF52402 1 138 4.44E-21 T 11-11-2016 WS_RS04000 c5627eb20ad69cec7dd827a5061fa34f 138 Gene3D G3DSA:3.40.50.620 1 138 2.1E-22 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold WS_RS04000 c5627eb20ad69cec7dd827a5061fa34f 138 PRINTS PR01438 Universal stress protein signature 116 138 1.4E-7 T 11-11-2016 IPR006015 Universal stress protein A WS_RS04000 c5627eb20ad69cec7dd827a5061fa34f 138 PRINTS PR01438 Universal stress protein signature 99 111 1.4E-7 T 11-11-2016 IPR006015 Universal stress protein A WS_RS04000 c5627eb20ad69cec7dd827a5061fa34f 138 PRINTS PR01438 Universal stress protein signature 1 19 1.4E-7 T 11-11-2016 IPR006015 Universal stress protein A WS_RS06415 a711fbcbb8a593c79569bf6dc5ee63ff 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 104 1.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS06415 a711fbcbb8a593c79569bf6dc5ee63ff 121 SUPERFAMILY SSF46626 19 115 2.36E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS06415 a711fbcbb8a593c79569bf6dc5ee63ff 121 Gene3D G3DSA:1.10.760.10 26 107 1.0E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS03060 abcf08afe53acb6dd7e635ce941c325d 505 Pfam PF11853 Protein of unknown function (DUF3373) 2 505 2.6E-167 T 11-11-2016 IPR021803 Protein of unknown function DUF3373 WS_RS02885 24bc2460f153c73957c764ce68a36333 320 Pfam PF16344 Domain of unknown function (DUF4974) 219 306 3.5E-10 T 11-11-2016 IPR032508 Protein FecR, C-terminal WS_RS02885 24bc2460f153c73957c764ce68a36333 320 PIRSF PIRSF018266 2 319 1.2E-61 T 11-11-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component WS_RS02885 24bc2460f153c73957c764ce68a36333 320 Pfam PF04773 FecR protein 118 203 5.0E-19 T 11-11-2016 IPR006860 FecR protein WS_RS04420 e6334e2c9dd2121eee05bdff5d407460 154 SUPERFAMILY SSF46626 88 152 3.84E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04420 e6334e2c9dd2121eee05bdff5d407460 154 SUPERFAMILY SSF46626 10 58 3.84E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS04420 e6334e2c9dd2121eee05bdff5d407460 154 Gene3D G3DSA:1.10.760.10 84 150 3.4E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 WS_RS01315 d7c8eb730b76f32daf88dfd7a4ad9ed0 271 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 26 244 5.9E-83 T 11-11-2016 IPR029276 Plasminogen-binding protein PgbA, N-terminal WS_RS00210 f9d5aee1436d860c25fd4322228e691a 707 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 53 475 9.7E-36 T 11-11-2016 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 WS_RS07390 99b1171f1544e849f84ad114867caf68 469 Pfam PF10080 Predicted membrane protein (DUF2318) 296 397 5.7E-29 T 11-11-2016 IPR018758 Domain of unknown function DUF2318, membrane WS_RS07390 99b1171f1544e849f84ad114867caf68 469 Pfam PF04945 YHS domain 405 451 4.5E-8 T 11-11-2016 IPR007029 YHS domain WS_RS07380 6ea7053e950166b1bad6eea09b68c982 381 Pfam PF02687 FtsX-like permease family 260 371 1.2E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 WS_RS06100 011dc3a05fc5d20da710edeb495cd6b5 328 Pfam PF02445 Quinolinate synthetase A protein 3 326 1.1E-95 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 WS_RS06100 011dc3a05fc5d20da710edeb495cd6b5 328 SUPERFAMILY SSF142754 2 327 1.31E-91 T 11-11-2016 WS_RS06100 011dc3a05fc5d20da710edeb495cd6b5 328 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 2 328 1.6E-104 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 WS_RS02125 1caad94ff10be75f9891d17764b76cac 507 SUPERFAMILY SSF50182 313 393 2.62E-6 T 11-11-2016 IPR010920 LSM domain WS_RS02125 1caad94ff10be75f9891d17764b76cac 507 Pfam PF00924 Mechanosensitive ion channel 270 462 2.6E-19 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 WS_RS10350 276d51363748e275a3f09349278ee7b5 679 SUPERFAMILY SSF53756 323 545 5.23E-11 T 11-11-2016 WS_RS02160 25f05b79ee49c12e1c44a974e1392e79 607 Pfam PF03961 Protein of unknown function (DUF342) 100 596 2.9E-66 T 11-11-2016 IPR005646 Protein of unknown function DUF342 WS_RS01960 7bca00619995cd06a9e6046c54f88d26 76 SUPERFAMILY SSF54285 2 76 1.87E-13 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp WS_RS01960 7bca00619995cd06a9e6046c54f88d26 76 Gene3D G3DSA:3.10.20.30 1 76 3.7E-16 T 11-11-2016 IPR012675 Beta-grasp domain WS_RS01960 7bca00619995cd06a9e6046c54f88d26 76 Pfam PF02597 ThiS family 5 76 1.2E-12 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 WS_RS05910 30f9a91e39e147d0f641484d5efb2aaf 412 SUPERFAMILY SSF53822 136 327 1.35E-6 T 11-11-2016 IPR028082 Periplasmic binding protein-like I WS_RS07325 78064b4f3e93ef794706b624be54fd42 567 Pfam PF02554 Carbon starvation protein CstA 1 349 9.9E-114 T 11-11-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 WS_RS07325 78064b4f3e93ef794706b624be54fd42 567 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 395 516 8.1E-32 T 11-11-2016 IPR025299 CstA, C-terminal domain WS_RS02820 59dfaa72c7747607eff508edb05a8ddf 217 Hamap MF_01421 UPF0323 lipoprotein . 1 217 36.867 T 11-11-2016 IPR020913 Uncharacterised protein family UPF0323 WS_RS07460 8c91eeb0e8bc6c943a9949d8585b8fb1 141 Pfam PF04186 FxsA cytoplasmic membrane protein 5 102 1.1E-11 T 11-11-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 WS_RS02810 2c7cfd00e9a6f4900f00af2bb4d8be09 520 Pfam PF01435 Peptidase family M48 98 291 7.1E-11 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 WS_RS02810 2c7cfd00e9a6f4900f00af2bb4d8be09 520 Gene3D G3DSA:3.30.2010.10 89 173 9.5E-11 T 11-11-2016 WS_RS09475 960ca95a7974a2d89d287e8618639504 150 Gene3D G3DSA:3.30.420.40 14 90 1.6E-7 T 11-11-2016 WS_RS09475 960ca95a7974a2d89d287e8618639504 150 SUPERFAMILY SSF53067 4 91 1.42E-11 T 11-11-2016 WS_RS06410 2148666539080876250f86ced20d6fa4 388 Pfam PF00999 Sodium/hydrogen exchanger family 6 379 5.4E-38 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 WS_RS05640 78fe9bd3f12a1e4003fb73d27fc4007d 252 Pfam PF01925 Sulfite exporter TauE/SafE 13 245 1.2E-42 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 WS_RS08155 c13efdfb5abbec4a634c4dfcbbdbb2aa 182 Pfam PF12163 DNA replication regulator 1 180 6.1E-80 T 11-11-2016 IPR021011 DNA replication regulator, HobA WS_RS04895 d67aaf8c08b9fc741044cfabe83dadc4 113 Hamap MF_02117 N(2)-fixation sustaining protein CowN [cowN]. 18 113 22.242 T 11-11-2016 IPR024899 Nitrogen fixation-sustaining protein CowN GO:0009399 WS_RS02630 d2510ec20aae10c0da41d1dca79161e1 256 SUPERFAMILY SSF54523 6 99 1.73E-8 T 11-11-2016 WS_RS08525 3459d4b7c37bbe9171a33a8fb302d968 82 SUPERFAMILY SSF48452 5 59 7.59E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS08525 3459d4b7c37bbe9171a33a8fb302d968 82 Gene3D G3DSA:1.25.40.10 5 55 2.2E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 WS_RS07560 aeec4a299efef57a02255f5cce13fc5a 214 SUPERFAMILY SSF69618 21 209 6.67E-26 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS07560 aeec4a299efef57a02255f5cce13fc5a 214 Gene3D G3DSA:3.40.50.10090 32 127 5.4E-11 T 11-11-2016 WS_RS07560 aeec4a299efef57a02255f5cce13fc5a 214 Gene3D G3DSA:3.40.50.10090 128 188 4.2E-6 T 11-11-2016 WS_RS07560 aeec4a299efef57a02255f5cce13fc5a 214 Pfam PF02602 Uroporphyrinogen-III synthase HemD 29 205 3.9E-24 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 WS_RS06800 9203180297b71ccb1684da2601e34c09 142 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 2 139 5.9E-75 T 11-11-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 WS_RS06800 9203180297b71ccb1684da2601e34c09 142 Pfam PF01618 MotA/TolQ/ExbB proton channel family 43 135 2.5E-27 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 WS_RS03110 9b3d5e6917e4b6c41a36a34a22a538e7 393 Pfam PF02687 FtsX-like permease family 261 383 9.6E-11 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 WS_RS05570 ed793e1333cb71114cb8c751a6cc40e4 182 Pfam PF14345 GDYXXLXY protein 20 170 2.5E-26 T 11-11-2016 IPR025833 GDYXXLXY protein WS_RS08995 3e5ada8ce607a16b05b9cd7d99b88ac9 129 Pfam PF03692 Putative zinc- or iron-chelating domain 18 116 8.1E-14 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein WS_RS02765 81c1d20c4c0bf304d63879ac0e8eab79 244 Pfam PF03883 Protein of unknown function (DUF328) 1 208 2.3E-29 T 11-11-2016 IPR005583 Peroxide stress protein YaaA WS_RS03465 8fcea5121c5b64dba440d62ead3323e7 302 Pfam PF03547 Membrane transport protein 154 296 2.5E-12 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 WS_RS03465 8fcea5121c5b64dba440d62ead3323e7 302 Pfam PF03547 Membrane transport protein 3 132 6.6E-16 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 WS_RS06365 9ffccc171fbe45c91245983717e642e5 201 Pfam PF01810 LysE type translocator 16 193 9.8E-26 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 WS_RS04240 2bb9c8ae3022ad6c4639d34b6ffc3186 693 SUPERFAMILY SSF58113 309 492 5.49E-7 T 11-11-2016 WS_RS05260 5a11a890fcd8d996932584ca9eaf68db 367 Pfam PF03743 Bacterial conjugation TrbI-like protein 164 345 7.6E-43 T 11-11-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI WS_RS04865 5dfa2c93ec66176ad79a9e79cf906bbb 75 Pfam PF09834 Predicted membrane protein (DUF2061) 10 61 3.6E-23 T 11-11-2016 IPR018638 Domain of unknown function DUF2061, membrane WS_RS10070 b6c290e06642bec9502238e090beb12b 450 PIRSF PIRSF006603 1 445 7.2E-59 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS10070 b6c290e06642bec9502238e090beb12b 450 Pfam PF01554 MatE 21 182 3.4E-22 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS10070 b6c290e06642bec9502238e090beb12b 450 Pfam PF01554 MatE 260 393 2.4E-12 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 WS_RS00070 a63acecd321d56f48dec4b1ba5621417 499 Pfam PF07556 Protein of unknown function (DUF1538) 279 488 5.8E-64 T 11-11-2016 IPR011435 Protein of unknown function DUF1538 WS_RS00070 a63acecd321d56f48dec4b1ba5621417 499 Pfam PF07556 Protein of unknown function (DUF1538) 22 232 4.8E-62 T 11-11-2016 IPR011435 Protein of unknown function DUF1538 WS_RS05935 a528fd1eaec344898de805335b9f1d1c 141 Pfam PF04519 Polymer-forming cytoskeletal 18 113 1.0E-21 T 11-11-2016 IPR007607 Protein of unknown function DUF583 WS_RS05320 80d57d1462971e6265c0b6169f0c6da0 86 Gene3D G3DSA:1.20.1480.20 6 70 8.6E-4 T 11-11-2016 IPR023142 Microtubule-associated serine/threonine-protein kinase, pre-PK domain GO:0004674 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 WS_RS01895 a4aee725eea041e723387ceb4433ab16 318 Pfam PF03916 Polysulphide reductase, NrfD 13 316 6.1E-59 T 11-11-2016 IPR005614 NrfD family WS_RS00265 292a31030e25b618585cf881907b428f 258 Pfam PF04085 rod shape-determining protein MreC 150 248 1.5E-12 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 WS_RS10210 f748e03fd8c5b67de2e2b5f4590ac160 233 Pfam PF06347 Bacterial SH3 domain 111 156 3.1E-8 T 11-11-2016 IPR010466 Protein of unknown function DUF1058 WS_RS10210 f748e03fd8c5b67de2e2b5f4590ac160 233 Pfam PF06347 Bacterial SH3 domain 185 230 3.1E-8 T 11-11-2016 IPR010466 Protein of unknown function DUF1058 WS_RS08710 49c31e1cb837d21f2b682deabd1b3f89 511 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 504 3.2E-170 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 WS_RS01940 378930e93539864ffb98afeeb6902aea 169 SUPERFAMILY SSF160387 64 115 3.92E-5 T 11-11-2016 WS_RS03160 dca722d702019492823d8a2772dca403 199 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 193 6.5E-45 T 11-11-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 WS_RS00940 b5e276acf86a1fd6b964b9694024b070 162 Pfam PF05751 FixH 4 150 3.5E-13 T 11-11-2016 IPR008620 Nitrogen fixation protein FixH WS_RS03905 44ea2057db873a2b999b9bd27b4619cf 254 Pfam PF01148 Cytidylyltransferase family 11 249 9.9E-44 T 11-11-2016 WS_RS04285 d2fab45ba5cfcd6fab2da4e4823401ea 462 Pfam PF02470 MlaD protein 35 110 7.6E-13 T 11-11-2016 IPR003399 Mce/MlaD WS_RS10710 74f90afb5a8da4a1f4987e31607345d0 396 Pfam PF04773 FecR protein 53 154 2.8E-15 T 11-11-2016 IPR006860 FecR protein WS_RS08405 2e12e18a88a4503e5cc19429d57f20b7 512 Pfam PF00361 Proton-conducting membrane transporter 153 433 1.6E-44 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS01865 5441ceb297e738ff547f12c0a8df6c44 236 Pfam PF04402 Protein of unknown function (DUF541) 38 211 3.1E-14 T 11-11-2016 IPR007497 Protein of unknown function DUF541 WS_RS01865 5441ceb297e738ff547f12c0a8df6c44 236 PIRSF PIRSF029033 1 236 4.1E-94 T 11-11-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein WS_RS10360 7275aaceee6ca7ea0e27b049a86f187b 643 Pfam PF01973 Protein of unknown function DUF115 206 377 1.8E-37 T 11-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like WS_RS07855 5bf715aa68752ff609ddf50108128ead 386 Pfam PF01098 Cell cycle protein 7 385 1.4E-88 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 WS_RS03845 8bb7df91fe7bf21b3493ab3cc6272f33 202 Pfam PF09976 Tetratricopeptide repeat-like domain 30 175 1.7E-8 T 11-11-2016 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 WS_RS08290 3805fb22bfb83357cc083a420b50ca6f 628 Pfam PF02120 Flagellar hook-length control protein FliK 499 576 1.1E-14 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal WS_RS00290 7ea9c0e3ee6a1bbf26cb051549798c47 370 Pfam PF02677 Uncharacterized BCR, COG1636 9 184 5.9E-54 T 11-11-2016 IPR003828 Protein of unknown function DUF208 WS_RS10595 0c286cbb3ede6b7c1283ca91f2bc5e10 147 SUPERFAMILY SSF160387 45 127 2.62E-5 T 11-11-2016 WS_RS03560 c91ea1d75edb2917075a2373f6869c48 434 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 79 427 4.3E-83 T 11-11-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit WS_RS08750 1b4f6e97b92b0b9011b1653d0dee2e93 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 156 1.7E-28 T 11-11-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component WS_RS07010 09f50c5b7da9c07549162cfff30bf798 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 1.0E-45 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 WS_RS09335 23888e5e73239bfd853fbc973357425a 274 Pfam PF01882 Protein of unknown function DUF58 35 118 3.9E-10 T 11-11-2016 IPR002881 Domain of unknown function DUF58 WS_RS02340 63779a4a0a7d9e7959592eef9f8ed8fb 129 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 6 126 16.758 T 11-11-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 WS_RS02340 63779a4a0a7d9e7959592eef9f8ed8fb 129 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 33 125 7.7E-33 T 11-11-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS09360 b1c74928adf85d673ce2f884e4469050 118 Pfam PF02620 Uncharacterized ACR, COG1399 38 103 9.7E-7 T 11-11-2016 IPR003772 Protein of unknown function DUF177 WS_RS08410 91a115c25f42819fae5eae52302dae6e 518 Pfam PF00361 Proton-conducting membrane transporter 121 406 8.5E-18 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 WS_RS00705 7ce5ba064b362b174be5f9abaf973de0 307 Pfam PF01758 Sodium Bile acid symporter family 35 212 7.5E-38 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 WS_RS05645 26893f406d564515ca61335dd09dd20d 460 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 124 7.6E-16 T 11-11-2016 IPR029095 NarX-like, N-terminal WS_RS05645 26893f406d564515ca61335dd09dd20d 460 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 162 252 1.9E-5 T 11-11-2016 IPR029095 NarX-like, N-terminal