locus-tag	class	description
VB87_RS00025	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
VB87_RS00450	COG1304	FMN binding
VB87_RS00485	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
VB87_RS00490	COG0187	DNA topoisomerase II activity
VB87_RS00495	COG1266	CAAX protease self-immunity
VB87_RS00500	COG0501	Belongs to the peptidase M48B family
VB87_RS00545	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VB87_RS00565	COG1304	FMN binding
VB87_RS00590	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VB87_RS00595	COG1074	ATP-dependent DNA helicase activity
VB87_RS00600	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
VB87_RS00605	COG1127	ABC transporter
VB87_RS00610	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VB87_RS00615	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VB87_RS00630	COG2853	Lipoprotein
VB87_RS00635	COG0386	Belongs to the glutathione peroxidase family
VB87_RS00640	COG1322	Protein conserved in bacteria
VB87_RS00650	COG3693	PFAM glycoside hydrolase, family 10
VB87_RS00665	COG2211	Major facilitator Superfamily
VB87_RS00680	COG2937	Belongs to the GPAT DAPAT family
VB87_RS00705	COG0284	orotidine-5'-phosphate decarboxylase activity
VB87_RS00710	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
VB87_RS00740	COG3186	Phenylalanine-4-hydroxylase
VB87_RS00745	COG1522	sequence-specific DNA binding
VB87_RS00755	COG0246	Mannitol dehydrogenase
VB87_RS00760	COG1472	Belongs to the glycosyl hydrolase 3 family
VB87_RS00770	COG4948	Mandelate Racemase Muconate Lactonizing
VB87_RS00780	COG3661	Belongs to the glycosyl hydrolase 67 family
VB87_RS00795	COG0037	tRNA processing
VB87_RS00815	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
VB87_RS00835	COG0805	protein transport
VB87_RS00845	COG0518	GMP synthase (glutamine-hydrolyzing) activity
VB87_RS00845	COG0519	Catalyzes the synthesis of GMP from XMP
VB87_RS00855	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VB87_RS00870	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
VB87_RS00875	COG3265	gluconokinase activity
VB87_RS00880	COG2211	Major facilitator Superfamily
VB87_RS00885	COG3459	Glycosyltransferase 36 associated
VB87_RS00890	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VB87_RS00895	COG2205	protein histidine kinase activity
VB87_RS00900	COG0457	Tetratricopeptide repeat
VB87_RS00915	COG1971	Probably functions as a manganese efflux pump
VB87_RS00960	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VB87_RS00980	COG2091	lysine biosynthetic process via aminoadipic acid
VB87_RS00985	COG3540	Alkaline phosphatase
VB87_RS00990	COG0357	Ribosomal RNA small subunit methyltransferase G
VB87_RS00995	COG1192	Involved in chromosome partitioning
VB87_RS01010	COG0463	Glycosyl transferase, family 2
VB87_RS01020	COG0227	Belongs to the bacterial ribosomal protein bL28 family
VB87_RS01025	COG0267	Belongs to the bacterial ribosomal protein bL33 family
VB87_RS01040	COG0210	DNA helicase
VB87_RS01050	COG0589	response to stress
VB87_RS01075	COG0408	coproporphyrinogen oxidase activity
VB87_RS01090	COG1271	oxidase subunit
VB87_RS01095	COG1294	oxidase, subunit
VB87_RS01100	COG0318	PFAM AMP-dependent synthetase and ligase
VB87_RS01115	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
VB87_RS01130	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VB87_RS01155	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS01170	COG0463	Glycosyl transferase, family 2
VB87_RS01180	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VB87_RS01185	COG3100	YcgL domain-containing protein
VB87_RS01195	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
VB87_RS01205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VB87_RS01205	COG1042	CoA-binding domain protein
VB87_RS01205	COG0045	succinate-CoA ligase (ADP-forming) activity
VB87_RS01225	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
VB87_RS01230	COG1960	acyl-CoA dehydrogenase activity
VB87_RS01235	COG3245	cytochrome
VB87_RS01250	COG0523	cobalamin synthesis protein
VB87_RS01260	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
VB87_RS01265	COG1846	Transcriptional regulator
VB87_RS01270	COG1764	response to oxidative stress
VB87_RS01275	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VB87_RS01280	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VB87_RS01300	COG1902	pentaerythritol trinitrate reductase activity
VB87_RS01305	COG2084	Dehydrogenase
VB87_RS01315	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
VB87_RS01650	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VB87_RS01690	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
VB87_RS01690	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
VB87_RS01725	COG0180	Tryptophanyl-tRNA synthetase
VB87_RS01755	COG3279	Response regulator of the LytR AlgR family
VB87_RS01770	COG0753	catalase activity
VB87_RS01775	COG1320	monovalent cation:proton antiporter activity
VB87_RS01780	COG2212	antiporter activity
VB87_RS01790	COG0651	ATP synthesis coupled electron transport
VB87_RS01795	COG1006	Multisubunit Na H antiporter MnhC subunit
VB87_RS01800	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
VB87_RS01800	COG2111	Na H antiporter
VB87_RS01855	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
VB87_RS01860	COG0134	indole-3-glycerol-phosphate synthase activity
VB87_RS01875	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VB87_RS01880	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
VB87_RS01890	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
VB87_RS01915	COG1051	belongs to the nudix hydrolase family
VB87_RS01955	COG2816	NAD+ diphosphatase activity
VB87_RS01970	COG1289	transmembrane transporter activity
VB87_RS01975	COG0151	Belongs to the GarS family
VB87_RS01980	COG0138	bifunctional purine biosynthesis protein purh
VB87_RS01990	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
VB87_RS02000	COG2264	protein methyltransferase activity
VB87_RS02005	COG0439	Biotin carboxylase
VB87_RS02010	COG0511	ligase activity, forming carbon-carbon bonds
VB87_RS02015	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VB87_RS02020	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VB87_RS02035	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
VB87_RS02040	COG0459	protein refolding
VB87_RS02050	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VB87_RS02060	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
VB87_RS02065	COG0584	glycerophosphoryl diester phosphodiesterase
VB87_RS02090	COG2353	YceI-like domain
VB87_RS02130	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
VB87_RS02140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VB87_RS02145	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VB87_RS02160	COG0657	acetylesterase activity
VB87_RS02200	COG0156	8-amino-7-oxononanoate synthase activity
VB87_RS02205	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VB87_RS02210	COG1040	competence protein
VB87_RS02225	COG2267	carboxylic ester hydrolase activity
VB87_RS02230	COG0606	chelatase, subunit chli
VB87_RS02235	COG2960	long-chain fatty acid transporting porin activity
VB87_RS02250	COG1166	arginine decarboxylase activity
VB87_RS02255	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VB87_RS02260	COG1819	glycosyl
VB87_RS02265	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
VB87_RS02265	COG2755	lipolytic protein G-D-S-L family
VB87_RS02280	COG4221	oxidoreductase activity
VB87_RS02300	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
VB87_RS02320	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
VB87_RS02345	COG0739	heme binding
VB87_RS02350	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VB87_RS02380	COG1064	alcohol dehydrogenase
VB87_RS02395	COG4942	peptidase
VB87_RS02400	COG0793	Belongs to the peptidase S41A family
VB87_RS02435	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
VB87_RS02445	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
VB87_RS02470	COG1612	heme a metabolic process
VB87_RS02475	COG0109	protoheme IX farnesyltransferase activity
VB87_RS02495	COG0358	DNA primase activity
VB87_RS02500	COG1295	ribonuclease BN
VB87_RS02525	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
VB87_RS02535	COG0531	amino acid
VB87_RS02540	COG4948	Mandelate Racemase Muconate Lactonizing
VB87_RS02550	COG3023	N-Acetylmuramoyl-L-alanine amidase
VB87_RS02570	COG5383	Protein conserved in bacteria
VB87_RS02575	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VB87_RS02605	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VB87_RS02630	COG4807	Protein conserved in bacteria
VB87_RS02660	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS02665	COG0179	Fumarylacetoacetate (FAA) hydrolase
VB87_RS02670	COG4948	Mandelate Racemase Muconate Lactonizing
VB87_RS02675	COG3254	rhamnose metabolic process
VB87_RS02680	COG0738	Major facilitator superfamily
VB87_RS02685	COG1414	Transcriptional regulator
VB87_RS02695	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VB87_RS02710	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VB87_RS02725	COG0583	DNA-binding transcription factor activity
VB87_RS02730	COG3634	alkyl hydroperoxide reductase activity
VB87_RS02740	COG2890	protein-(glutamine-N5) methyltransferase activity
VB87_RS02760	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VB87_RS02760	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VB87_RS02815	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VB87_RS02835	COG1295	ribonuclease BN
VB87_RS02840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VB87_RS02850	COG0521	Mo-molybdopterin cofactor biosynthetic process
VB87_RS02855	COG5297	Belongs to the glycosyl hydrolase family 6
VB87_RS02865	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
VB87_RS02870	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
VB87_RS02895	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
VB87_RS02905	COG0193	aminoacyl-tRNA hydrolase activity
VB87_RS02910	COG0012	GTP binding
VB87_RS02945	COG0250	Participates in transcription elongation, termination and antitermination
VB87_RS02950	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
VB87_RS02960	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
VB87_RS02965	COG0222	ribosome binding
VB87_RS02970	COG0085	RNA polymerase activity
VB87_RS02975	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
VB87_RS02985	COG0049	tRNA binding
VB87_RS02990	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VB87_RS03000	COG0051	transcription antitermination factor activity, RNA binding
VB87_RS03010	COG0088	Forms part of the polypeptide exit tunnel
VB87_RS03015	COG0089	rRNA binding
VB87_RS03020	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
VB87_RS03045	COG0255	Belongs to the universal ribosomal protein uL29 family
VB87_RS03050	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
VB87_RS03060	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
VB87_RS03065	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
VB87_RS03070	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
VB87_RS03085	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
VB87_RS03095	COG1841	ribosomal large subunit assembly
VB87_RS03105	COG0201	protein transport
VB87_RS03110	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
VB87_RS03120	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
VB87_RS03130	COG0203	ribosomal protein L17
VB87_RS03135	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
VB87_RS03145	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
VB87_RS03155	COG1217	gtp-binding protein TYPA
VB87_RS03160	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VB87_RS03170	COG0039	L-malate dehydrogenase activity
VB87_RS03180	COG0625	glutathione transferase activity
VB87_RS03200	COG0584	glycerophosphoryl diester phosphodiesterase
VB87_RS03215	COG0446	pyridine nucleotide-disulphide oxidoreductase
VB87_RS03215	COG1902	pentaerythritol trinitrate reductase activity
VB87_RS03225	COG2885	chlorophyll binding
VB87_RS03235	COG1187	pseudouridine synthase activity
VB87_RS03240	COG0156	8-amino-7-oxononanoate synthase activity
VB87_RS03255	COG0588	phosphoglycerate mutase activity
VB87_RS03260	COG0285	dihydrofolate synthase activity
VB87_RS03280	COG2833	Protein of unknown function (DUF455)
VB87_RS03290	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VB87_RS03300	COG0438	transferase activity, transferring glycosyl groups
VB87_RS03305	COG0248	Ppx GppA phosphatase
VB87_RS03310	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
VB87_RS03325	COG4783	chaperone-mediated protein folding
VB87_RS03340	COG0473	3-isopropylmalate dehydrogenase activity
VB87_RS03375	COG0544	peptidyl-prolyl cis-trans isomerase activity
VB87_RS03415	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VB87_RS03425	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VB87_RS03435	COG0328	RNA-DNA hybrid ribonuclease activity
VB87_RS03440	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VB87_RS03445	COG0631	protein serine/threonine phosphatase activity
VB87_RS03460	COG0859	PFAM glycosyl transferase family 9
VB87_RS03465	COG3642	lipopolysaccharide core region biosynthetic process
VB87_RS03470	COG1234	tRNA 3'-trailer cleavage
VB87_RS03475	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
VB87_RS03485	COG0315	cyclic pyranopterin monophosphate synthase activity
VB87_RS03490	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
VB87_RS03495	COG0314	molybdopterin synthase activity
VB87_RS03505	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
VB87_RS03525	COG0537	adenosine 5'-monophosphoramidase activity
VB87_RS03545	COG0714	Associated with various cellular activities
VB87_RS03565	COG1399	metal-binding, possibly nucleic acid-binding protein
VB87_RS03570	COG0333	Belongs to the bacterial ribosomal protein bL32 family
VB87_RS03575	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VB87_RS03580	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
VB87_RS03585	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS03600	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VB87_RS03605	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
VB87_RS03610	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
VB87_RS03650	COG0372	Belongs to the citrate synthase family
VB87_RS03665	COG4771	TonB-dependent receptor
VB87_RS03680	COG4771	TonB-dependent receptor
VB87_RS03695	COG0840	transmembrane signaling receptor activity
VB87_RS03700	COG0678	peroxiredoxin activity
VB87_RS03720	COG0604	alcohol dehydrogenase
VB87_RS03725	COG0330	HflC and HflK could
VB87_RS03730	COG0330	HflC and HflK could
VB87_RS03735	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VB87_RS03740	COG3511	phospholipase C
VB87_RS03750	COG0189	ligase activity
VB87_RS03755	COG0745	RESPONSE REGULATOR receiver
VB87_RS03760	COG0642	Histidine kinase
VB87_RS03770	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
VB87_RS03875	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
VB87_RS03875	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VB87_RS03885	COG1262	PFAM Formylglycine-generating sulfatase enzyme
VB87_RS03895	COG1174	glycine betaine transport
VB87_RS03900	COG1125	glycine betaine transport
VB87_RS03905	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VB87_RS03910	COG0564	pseudouridine synthase activity
VB87_RS03920	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
VB87_RS03925	COG3387	PFAM Glycoside hydrolase 15-related
VB87_RS03930	COG1877	trehalose-phosphatase activity
VB87_RS03965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VB87_RS03970	COG1136	(ABC) transporter
VB87_RS03975	COG0577	efflux transmembrane transporter activity
VB87_RS04000	COG0542	response to heat
VB87_RS04015	COG0019	diaminopimelate decarboxylase activity
VB87_RS04020	COG4264	IucA IucC family
VB87_RS04025	COG2814	Major facilitator Superfamily
VB87_RS04030	COG4264	IucA IucC family
VB87_RS04040	COG4772	TonB-dependent receptor
VB87_RS04050	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VB87_RS04050	COG4651	solute:proton antiporter activity
VB87_RS04065	COG2963	transposase activity
VB87_RS04080	COG4206	TonB-dependent receptor
VB87_RS04085	COG2211	Major facilitator Superfamily
VB87_RS04115	COG1301	dicarboxylic acid transport
VB87_RS04150	COG1560	Kdo2-lipid A biosynthetic process
VB87_RS04155	COG1519	Transferase
VB87_RS04160	COG1538	Outer membrane efflux protein
VB87_RS04165	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
VB87_RS04175	COG3300	MHYT domain
VB87_RS04175	COG5001	Diguanylate cyclase
VB87_RS04180	COG0473	3-isopropylmalate dehydrogenase activity
VB87_RS04195	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
VB87_RS04205	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
VB87_RS04225	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
VB87_RS04230	COG0840	transmembrane signaling receptor activity
VB87_RS04245	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
VB87_RS04255	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
VB87_RS04275	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VB87_RS04300	COG0586	Pfam SNARE associated Golgi protein
VB87_RS04315	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VB87_RS04320	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
VB87_RS04330	COG1773	rubredoxin
VB87_RS04335	COG2912	Transglutaminase-like superfamily
VB87_RS04345	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
VB87_RS04355	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
VB87_RS04380	COG0006	proline dipeptidase activity
VB87_RS04385	COG0006	proline dipeptidase activity
VB87_RS04400	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VB87_RS04410	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
VB87_RS04415	COG1561	YicC-like family, N-terminal region
VB87_RS04420	COG0194	GDP metabolic process
VB87_RS04425	COG1758	RNA polymerase activity
VB87_RS04430	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VB87_RS04440	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
VB87_RS04455	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VB87_RS04460	COG1077	Cell shape determining protein MreB Mrl
VB87_RS04465	COG1792	Involved in formation and maintenance of cell shape
VB87_RS04470	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
VB87_RS04475	COG0768	penicillin binding
VB87_RS04480	COG0772	Belongs to the SEDS family
VB87_RS04490	COG5434	Belongs to the glycosyl hydrolase 28 family
VB87_RS04495	COG2951	lytic endotransglycosylase activity
VB87_RS04505	COG1686	Belongs to the peptidase S11 family
VB87_RS04510	COG2921	Belongs to the UPF0250 family
VB87_RS04520	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
VB87_RS04535	COG1056	cytidyltransferase-related domain
VB87_RS04535	COG1051	belongs to the nudix hydrolase family
VB87_RS04555	COG1090	epimerase
VB87_RS04565	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
VB87_RS04580	COG2202	Pas domain
VB87_RS04580	COG2205	protein histidine kinase activity
VB87_RS04585	COG0784	Response regulator, receiver
VB87_RS04590	COG4191	Histidine kinase
VB87_RS04595	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VB87_RS04620	COG4305	rare lipoprotein A
VB87_RS04625	COG2188	Transcriptional regulator
VB87_RS04635	COG1609	Transcriptional regulator
VB87_RS04640	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VB87_RS04645	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VB87_RS04655	COG0741	lytic transglycosylase activity
VB87_RS04665	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VB87_RS04690	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VB87_RS04705	COG0218	Necessary for normal cell division and for the maintenance of normal septation
VB87_RS04730	COG2205	protein histidine kinase activity
VB87_RS04740	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
VB87_RS04770	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
VB87_RS04785	COG0436	Aminotransferase
VB87_RS04790	COG1162	GTPase activity
VB87_RS04815	COG2814	Major facilitator Superfamily
VB87_RS04835	COG2963	transposase activity
VB87_RS04855	COG2194	sulfuric ester hydrolase activity
VB87_RS04865	COG0745	RESPONSE REGULATOR receiver
VB87_RS04870	COG2205	protein histidine kinase activity
VB87_RS04880	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
VB87_RS04885	COG2894	cell division
VB87_RS04900	COG4585	Histidine kinase
VB87_RS04945	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
VB87_RS04955	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
VB87_RS04970	COG1946	Acyl-CoA thioesterase
VB87_RS04975	COG1250	3-hydroxyacyl-CoA dehydrogenase
VB87_RS04975	COG1024	Enoyl-CoA hydratase
VB87_RS04985	COG0824	Thioesterase
VB87_RS04990	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
VB87_RS04995	COG0261	This protein binds to 23S rRNA in the presence of protein L20
VB87_RS05000	COG0211	Belongs to the bacterial ribosomal protein bL27 family
VB87_RS05005	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VB87_RS05020	COG0196	riboflavin kinase activity
VB87_RS05055	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
VB87_RS05060	COG1845	cytochrome c oxidase, subunit III
VB87_RS05065	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
VB87_RS05075	COG0156	8-amino-7-oxononanoate synthase activity
VB87_RS05090	COG0129	dihydroxy-acid dehydratase activity
VB87_RS05110	COG1879	ABC-type sugar transport system periplasmic component
VB87_RS05115	COG1129	ABC transporter
VB87_RS05120	COG1172	Belongs to the binding-protein-dependent transport system permease family
VB87_RS05125	COG1172	Belongs to the binding-protein-dependent transport system permease family
VB87_RS05130	COG0475	glutathione-regulated potassium exporter activity
VB87_RS05145	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VB87_RS05150	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
VB87_RS05155	COG2070	2-Nitropropane dioxygenase
VB87_RS05170	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
VB87_RS05180	COG0335	large ribosomal subunit rRNA binding
VB87_RS05185	COG0534	Mate efflux family protein
VB87_RS05195	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
VB87_RS05220	COG3590	peptidase
VB87_RS05230	COG4206	TonB-dependent receptor
VB87_RS05235	COG0489	protein tyrosine kinase activity
VB87_RS05240	COG0717	Belongs to the dCTP deaminase family
VB87_RS05260	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VB87_RS05280	COG2890	protein-(glutamine-N5) methyltransferase activity
VB87_RS05285	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
VB87_RS05295	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VB87_RS05365	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS05370	COG0149	triose-phosphate isomerase activity
VB87_RS05375	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VB87_RS05385	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
VB87_RS05395	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
VB87_RS05400	COG0649	NAD binding
VB87_RS05405	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
VB87_RS05410	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
VB87_RS05415	COG1034	ATP synthesis coupled electron transport
VB87_RS05420	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
VB87_RS05450	COG1007	ATP synthesis coupled electron transport
VB87_RS05465	COG0195	Participates in both transcription termination and antitermination
VB87_RS05475	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
VB87_RS05490	COG1185	polyribonucleotide nucleotidyltransferase activity
VB87_RS05495	COG5001	Diguanylate cyclase
VB87_RS05495	COG3300	MHYT domain
VB87_RS05520	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VB87_RS05525	COG0719	Fe-S assembly protein
VB87_RS05530	COG0396	ATPase activity
VB87_RS05535	COG3755	Protein conserved in bacteria
VB87_RS05540	COG0719	Fe-S assembly protein
VB87_RS05570	COG0384	phenazine biosynthesis protein PhzF
VB87_RS05575	COG0527	aspartate kinase activity
VB87_RS05590	COG0142	geranyltranstransferase activity
VB87_RS05595	COG0629	single-stranded DNA binding
VB87_RS05610	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
VB87_RS05625	COG1012	belongs to the aldehyde dehydrogenase family
VB87_RS05640	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VB87_RS05655	COG3321	synthase
VB87_RS05655	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
VB87_RS05655	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
VB87_RS05665	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VB87_RS05685	COG1024	Enoyl-CoA hydratase
VB87_RS05690	COG1024	Enoyl-CoA hydratase
VB87_RS05700	COG1024	Enoyl-CoA hydratase
VB87_RS05715	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
VB87_RS05720	COG3104	oligopeptide transport
VB87_RS05725	COG1297	OPT oligopeptide transporter protein
VB87_RS05730	COG0823	Involved in the tonB-independent uptake of proteins
VB87_RS05730	COG1506	peptidase
VB87_RS05750	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
VB87_RS05760	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
VB87_RS05765	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
VB87_RS05800	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
VB87_RS05810	COG1960	acyl-CoA dehydrogenase activity
VB87_RS05840	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
VB87_RS05840	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
VB87_RS05850	COG0860	N-Acetylmuramoyl-L-alanine amidase
VB87_RS05855	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
VB87_RS05875	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS05895	COG2081	HI0933 family
VB87_RS05900	COG4681	YaeQ
VB87_RS05910	COG0625	glutathione transferase activity
VB87_RS05930	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VB87_RS05940	COG0513	Belongs to the DEAD box helicase family
VB87_RS05945	COG0488	(ABC) transporter
VB87_RS05960	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
VB87_RS05970	COG1472	Belongs to the glycosyl hydrolase 3 family
VB87_RS06010	COG0386	Belongs to the glutathione peroxidase family
VB87_RS06060	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
VB87_RS06065	COG0084	hydrolase, TatD family'
VB87_RS06080	COG0305	Participates in initiation and elongation during chromosome replication
VB87_RS06085	COG0415	Belongs to the DNA photolyase family
VB87_RS06095	COG2885	chlorophyll binding
VB87_RS06095	COG3047	cAMP biosynthetic process
VB87_RS06110	COG1819	glycosyl
VB87_RS06115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VB87_RS06135	COG2877	3-deoxy-8-phosphooctulonate synthase activity
VB87_RS06145	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
VB87_RS06150	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
VB87_RS06155	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
VB87_RS06165	COG2840	Smr protein MutS2
VB87_RS06170	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
VB87_RS06195	COG1534	Rna-binding protein
VB87_RS06200	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
VB87_RS06205	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VB87_RS06210	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
VB87_RS06215	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
VB87_RS06225	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
VB87_RS06230	COG1546	Belongs to the CinA family
VB87_RS06235	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
VB87_RS06240	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
VB87_RS06245	COG2137	regulation of response to DNA damage stimulus
VB87_RS06250	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VB87_RS06255	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
VB87_RS06275	COG0352	thiamine-phosphate diphosphorylase activity
VB87_RS06275	COG0351	phosphomethylpyrimidine kinase
VB87_RS06290	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
VB87_RS06295	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VB87_RS06305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VB87_RS06315	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
VB87_RS06320	COG3734	2-keto-3-deoxy-galactonokinase
VB87_RS06330	COG4948	Mandelate Racemase Muconate Lactonizing
VB87_RS06335	COG0800	Aldolase
VB87_RS06355	COG1501	Belongs to the glycosyl hydrolase 31 family
VB87_RS06360	COG1070	Carbohydrate kinase
VB87_RS06370	COG0477	Major facilitator Superfamily
VB87_RS06380	COG0860	N-Acetylmuramoyl-L-alanine amidase
VB87_RS06395	COG0617	tRNA 3'-terminal CCA addition
VB87_RS06405	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
VB87_RS06420	COG0166	Belongs to the GPI family
VB87_RS06425	COG1472	Belongs to the glycosyl hydrolase 3 family
VB87_RS06440	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
VB87_RS06455	COG0210	DNA helicase
VB87_RS06465	COG0812	UDP-N-acetylmuramate dehydrogenase activity
VB87_RS06470	COG0167	dihydroorotate dehydrogenase activity
VB87_RS06485	COG1012	belongs to the aldehyde dehydrogenase family
VB87_RS06535	COG1136	(ABC) transporter
VB87_RS06535	COG0577	efflux transmembrane transporter activity
VB87_RS06590	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
VB87_RS06600	COG0124	histidyl-tRNA synthetase
VB87_RS06615	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
VB87_RS06620	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
VB87_RS06625	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VB87_RS06650	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
VB87_RS06650	COG0140	phosphoribosyl-ATP diphosphatase activity
VB87_RS06655	COG1702	phosphate starvation-inducible protein PhoH
VB87_RS06665	COG0741	lytic transglycosylase activity
VB87_RS06670	COG0723	plastoquinol--plastocyanin reductase activity
VB87_RS06675	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
VB87_RS06680	COG2857	Cytochrome c1
VB87_RS06685	COG0625	glutathione transferase activity
VB87_RS06690	COG2969	positive regulation of protein catabolic process
VB87_RS06725	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
VB87_RS06730	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS06735	COG2095	MarC family integral membrane protein
VB87_RS06745	COG1611	Belongs to the LOG family
VB87_RS06750	COG3275	phosphorelay sensor kinase activity
VB87_RS06800	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
VB87_RS06840	COG4133	protoheme IX ABC transporter activity
VB87_RS06845	COG0436	Aminotransferase
VB87_RS06860	COG2199	diguanylate cyclase activity
VB87_RS06860	COG2200	EAL domain
VB87_RS06860	COG2203	Gaf domain
VB87_RS06865	COG0784	Response regulator, receiver
VB87_RS06865	COG2205	protein histidine kinase activity
VB87_RS06890	COG1187	pseudouridine synthase activity
VB87_RS06895	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
VB87_RS06900	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
VB87_RS06905	COG2350	Protein conserved in bacteria
VB87_RS06930	COG0395	ABC-type sugar transport system, permease component
VB87_RS06945	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
VB87_RS06950	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
VB87_RS06955	COG0235	Class ii aldolase
VB87_RS06960	COG0531	amino acid
VB87_RS06965	COG0531	amino acid
VB87_RS06975	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VB87_RS06980	COG0277	FAD linked oxidase domain protein
VB87_RS06995	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VB87_RS07010	COG1024	Enoyl-CoA hydratase
VB87_RS07035	COG0505	Belongs to the CarA family
VB87_RS07040	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VB87_RS07045	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VB87_RS07055	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
VB87_RS07060	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
VB87_RS07075	COG2198	Histidine kinase
VB87_RS07075	COG0784	Response regulator, receiver
VB87_RS07075	COG2205	protein histidine kinase activity
VB87_RS07085	COG0318	PFAM AMP-dependent synthetase and ligase
VB87_RS07130	COG0840	transmembrane signaling receptor activity
VB87_RS07140	COG0835	chemotaxis
VB87_RS07150	COG0840	transmembrane signaling receptor activity
VB87_RS07155	COG0840	transmembrane signaling receptor activity
VB87_RS07165	COG0840	transmembrane signaling receptor activity
VB87_RS07170	COG0840	transmembrane signaling receptor activity
VB87_RS07180	COG0745	RESPONSE REGULATOR receiver
VB87_RS07190	COG0835	chemotaxis
VB87_RS07195	COG1192	Involved in chromosome partitioning
VB87_RS07200	COG1360	Flagellar Motor Protein
VB87_RS07205	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VB87_RS07210	COG0784	Response regulator, receiver
VB87_RS07210	COG0643	Histidine kinase
VB87_RS07210	COG2198	Histidine kinase
VB87_RS07215	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
VB87_RS07250	COG1684	flagellar biosynthetic protein fliR
VB87_RS07265	COG3190	flagellar
VB87_RS07305	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VB87_RS07315	COG1677	Flagellar hook-basal body complex protein FliE
VB87_RS07340	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS07345	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS07350	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VB87_RS07370	COG2201	protein-glutamate methylesterase activity
VB87_RS07380	COG2197	response regulator
VB87_RS07405	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VB87_RS07415	COG1256	bacterial-type flagellum assembly
VB87_RS07430	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
VB87_RS07440	COG4787	bacterial-type flagellum-dependent cell motility
VB87_RS07445	COG1749	Flagellar hook protein flgE
VB87_RS07450	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
VB87_RS07455	COG1558	bacterial-type flagellum-dependent cell motility
VB87_RS07465	COG0835	chemotaxis
VB87_RS07465	COG0784	Response regulator, receiver
VB87_RS07510	COG1116	anion transmembrane transporter activity
VB87_RS07520	COG0840	transmembrane signaling receptor activity
VB87_RS07525	COG2915	High frequency lysogenization protein hflD homolog
VB87_RS07530	COG0482	sulfurtransferase activity
VB87_RS07545	COG0542	response to heat
VB87_RS07565	COG0492	ferredoxin-NADP+ reductase activity
VB87_RS07570	COG1674	ftsk spoiiie
VB87_RS07585	COG1230	cation diffusion facilitator family transporter
VB87_RS07590	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
VB87_RS07595	COG0038	chloride channel
VB87_RS07645	COG1595	DNA-templated transcription, initiation
VB87_RS07665	COG3038	cytochrome b561
VB87_RS07765	COG2207	Transcriptional regulator
VB87_RS07805	COG4790	Type iii secretion
VB87_RS07860	COG2963	transposase activity
VB87_RS07865	COG2192	nodulation
VB87_RS07905	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VB87_RS07920	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VB87_RS07945	COG3321	synthase
VB87_RS07945	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS07945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VB87_RS07945	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VB87_RS07945	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
VB87_RS07955	COG2050	protein possibly involved in aromatic compounds catabolism
VB87_RS08035	COG2963	transposase activity
VB87_RS08060	COG5002	protein histidine kinase activity
VB87_RS08060	COG5000	phosphorelay sensor kinase activity
VB87_RS08075	COG3713	MltA-interacting MipA family protein
VB87_RS08080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VB87_RS08120	COG1196	nuclear chromosome segregation
VB87_RS08200	COG0582	viral genome integration into host DNA
VB87_RS08225	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VB87_RS08230	COG0303	'Molybdopterin
VB87_RS08235	COG0746	molybdenum cofactor guanylyltransferase activity
VB87_RS08240	COG1160	GTP binding
VB87_RS08245	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VB87_RS08255	COG1426	Protein conserved in bacteria
VB87_RS08265	COG0820	rRNA (adenine-C2-)-methyltransferase activity
VB87_RS08280	COG1250	3-hydroxyacyl-CoA dehydrogenase
VB87_RS08280	COG1024	Enoyl-CoA hydratase
VB87_RS08285	COG0183	Belongs to the thiolase family
VB87_RS08290	COG1210	Utp--glucose-1-phosphate uridylyltransferase
VB87_RS08300	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VB87_RS08305	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
VB87_RS08315	COG0776	regulation of translation
VB87_RS08330	COG0257	Belongs to the bacterial ribosomal protein bL36 family
VB87_RS08340	COG2957	Belongs to the agmatine deiminase family
VB87_RS08345	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VB87_RS08370	COG0316	Belongs to the HesB IscA family
VB87_RS08370	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
VB87_RS08385	COG3064	Membrane
VB87_RS08395	COG1530	ribonuclease E activity
VB87_RS08490	COG2205	protein histidine kinase activity
VB87_RS08490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VB87_RS08495	COG2183	response to ionizing radiation
VB87_RS08500	COG0784	Response regulator, receiver
VB87_RS08500	COG4191	Histidine kinase
VB87_RS08510	COG3243	poly(R)-hydroxyalkanoic acid synthase
VB87_RS08520	COG1183	phosphatidylcholine synthase activity
VB87_RS08525	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS08550	COG0668	transmembrane transport
VB87_RS08555	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
VB87_RS08565	COG1321	iron dependent repressor
VB87_RS08570	COG1914	H( )-stimulated, divalent metal cation uptake system
VB87_RS08575	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
VB87_RS08585	COG2900	Belongs to the SlyX family
VB87_RS08600	COG0386	Belongs to the glutathione peroxidase family
VB87_RS08605	COG1725	Transcriptional regulator
VB87_RS08610	COG1131	(ABC) transporter
VB87_RS08645	COG2850	peptidyl-arginine hydroxylation
VB87_RS08655	COG0567	Dehydrogenase, E1 component
VB87_RS08680	COG1739	Uncharacterized protein family UPF0029
VB87_RS08685	COG1132	(ABC) transporter
VB87_RS08690	COG1605	Chorismate mutase
VB87_RS08690	COG0287	Prephenate dehydrogenase
VB87_RS08695	COG0484	heat shock protein binding
VB87_RS08700	COG0443	Heat shock 70 kDa protein
VB87_RS08705	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
VB87_RS08710	COG1420	regulation of RNA biosynthetic process
VB87_RS08715	COG0497	DNA recombination
VB87_RS08720	COG0735	belongs to the Fur family
VB87_RS08725	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VB87_RS08740	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
VB87_RS08745	COG1253	flavin adenine dinucleotide binding
VB87_RS08760	COG1054	Belongs to the UPF0176 family
VB87_RS08775	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
VB87_RS08780	COG5001	Diguanylate cyclase
VB87_RS08785	COG0069	glutamate synthase activity
VB87_RS08790	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
VB87_RS08810	COG0583	DNA-binding transcription factor activity
VB87_RS08830	COG0077	Prephenate dehydratase
VB87_RS08830	COG1605	Chorismate mutase
VB87_RS08835	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VB87_RS08840	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
VB87_RS08880	COG4221	oxidoreductase activity
VB87_RS08895	COG1228	amidohydrolase
VB87_RS08910	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
VB87_RS08955	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
VB87_RS08960	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VB87_RS08965	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VB87_RS08985	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
VB87_RS09000	COG0316	Belongs to the HesB IscA family
VB87_RS09070	COG0288	reversible hydration of carbon dioxide
VB87_RS09075	COG0662	Cupin 2, conserved barrel domain protein
VB87_RS09095	COG2925	Exonuclease
VB87_RS09120	COG2902	Dehydrogenase
VB87_RS09125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VB87_RS09130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VB87_RS09135	COG1960	acyl-CoA dehydrogenase activity
VB87_RS09140	COG2226	methyltransferase
VB87_RS09145	COG1410	methionine synthase
VB87_RS09145	COG0646	methionine synthase
VB87_RS09150	COG1410	methionine synthase
VB87_RS09150	COG0646	methionine synthase
VB87_RS09175	COG1136	(ABC) transporter
VB87_RS09225	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VB87_RS09230	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
VB87_RS09280	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
VB87_RS09325	COG0582	viral genome integration into host DNA
VB87_RS09345	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
VB87_RS09360	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VB87_RS09370	COG1663	tetraacyldisaccharide 4'-kinase activity
VB87_RS09385	COG0811	peptide transport
VB87_RS09400	COG4591	ABC-type transport system involved in lipoprotein release permease component
VB87_RS09410	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
VB87_RS09415	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
VB87_RS09430	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
VB87_RS09435	COG2009	succinate dehydrogenase
VB87_RS09440	COG0354	folic acid binding
VB87_RS09450	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
VB87_RS09470	COG0800	Aldolase
VB87_RS09495	COG2948	multi-organism process
VB87_RS09525	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VB87_RS09545	COG2963	transposase activity
VB87_RS09610	COG0556	nucleotide-excision repair
VB87_RS09620	COG2963	transposase activity
VB87_RS09645	COG2963	transposase activity
VB87_RS09650	COG1017	nitric oxide dioxygenase activity
VB87_RS09650	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VB87_RS09665	COG3604	Transcriptional regulator
VB87_RS09675	COG2963	transposase activity
VB87_RS09690	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VB87_RS09705	COG0165	Argininosuccinate lyase
VB87_RS09720	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VB87_RS09725	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
VB87_RS09735	COG0137	argininosuccinate synthase activity
VB87_RS09740	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
VB87_RS09755	COG2166	iron-sulfur cluster assembly
VB87_RS09790	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VB87_RS09820	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
VB87_RS09830	COG4677	pectinesterase activity
VB87_RS09835	COG5434	Belongs to the glycosyl hydrolase 28 family
VB87_RS09855	COG0402	S-adenosylhomocysteine deaminase activity
VB87_RS09865	COG1509	lysine 2,3-aminomutase activity
VB87_RS09870	COG2951	lytic endotransglycosylase activity
VB87_RS09885	COG0840	transmembrane signaling receptor activity
VB87_RS09890	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VB87_RS09895	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VB87_RS09900	COG1862	Preprotein translocase
VB87_RS09910	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
VB87_RS09920	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VB87_RS09925	COG3291	Pkd domain containing protein
VB87_RS09930	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VB87_RS09945	COG0644	oxidoreductase
VB87_RS09950	COG0405	Gamma-glutamyltransferase
VB87_RS09955	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VB87_RS09965	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
VB87_RS09970	COG0742	ribosomal rna small subunit methyltransferase
VB87_RS09985	COG3345	alpha-galactosidase
VB87_RS10040	COG0531	amino acid
VB87_RS10050	COG0006	proline dipeptidase activity
VB87_RS10060	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VB87_RS10075	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VB87_RS10080	COG3938	Belongs to the proline racemase family
VB87_RS10090	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VB87_RS10105	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VB87_RS10110	COG0686	Belongs to the AlaDH PNT family
VB87_RS10115	COG2733	membrane
VB87_RS10120	COG3850	Histidine kinase
VB87_RS10120	COG4999	Histidine kinase
VB87_RS10120	COG3437	response regulator, receiver
VB87_RS10120	COG2205	protein histidine kinase activity
VB87_RS10125	COG3437	response regulator, receiver
VB87_RS10165	COG0494	nUDIX hydrolase
VB87_RS10175	COG1024	Enoyl-CoA hydratase
VB87_RS10185	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
VB87_RS10195	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
VB87_RS10205	COG0573	inorganic phosphate transmembrane transporter activity
VB87_RS10210	COG0581	inorganic phosphate transmembrane transporter activity
VB87_RS10220	COG0704	Plays a role in the regulation of phosphate uptake
VB87_RS10240	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VB87_RS10250	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VB87_RS10255	COG0557	exoribonuclease II activity
VB87_RS10290	COG2814	Major facilitator Superfamily
VB87_RS10295	COG1566	PFAM secretion protein HlyD family protein
VB87_RS10330	COG0367	asparagine synthase
VB87_RS10340	COG1393	Belongs to the ArsC family
VB87_RS10350	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
VB87_RS10355	COG0024	Methionine aminopeptidase
VB87_RS10395	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
VB87_RS10400	COG0528	UMP kinase activity
VB87_RS10410	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
VB87_RS10415	COG0575	Belongs to the CDS family
VB87_RS10420	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
VB87_RS10425	COG0750	zinc metalloprotease
VB87_RS10435	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VB87_RS10445	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VB87_RS10470	COG1981	membrane
VB87_RS10515	COG1187	pseudouridine synthase activity
VB87_RS10565	COG0735	belongs to the Fur family
VB87_RS10580	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
VB87_RS10590	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
VB87_RS10595	COG0588	phosphoglycerate mutase activity
VB87_RS10600	COG1515	deoxyribonuclease V activity
VB87_RS10610	COG1741	Belongs to the pirin family
VB87_RS10620	COG1966	Carbon starvation protein
VB87_RS10625	COG2879	small protein
VB87_RS10640	COG0552	protein localization to endoplasmic reticulum
VB87_RS10645	COG1194	a g-specific adenine glycosylase
VB87_RS10680	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
VB87_RS10690	COG4535	Mg2 and Co2 transporter CorC
VB87_RS10700	COG0598	Magnesium transport protein CorA
VB87_RS10705	COG1012	belongs to the aldehyde dehydrogenase family
VB87_RS10710	COG1177	transmembrane transport
VB87_RS10715	COG1176	ABC-type spermidine putrescine transport system, permease component I
VB87_RS10720	COG3842	ATPase activity
VB87_RS10735	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
VB87_RS10740	COG0174	glutamine synthetase
VB87_RS10745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VB87_RS10755	COG0477	Major facilitator Superfamily
VB87_RS10765	COG0784	Response regulator, receiver
VB87_RS10765	COG2205	protein histidine kinase activity
VB87_RS10765	COG5002	protein histidine kinase activity
VB87_RS10775	COG0243	molybdopterin cofactor binding
VB87_RS10785	COG1012	belongs to the aldehyde dehydrogenase family
VB87_RS10800	COG3209	COG3209 Rhs family protein
VB87_RS10855	COG3178	'Phosphotransferase
VB87_RS10860	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
VB87_RS10885	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
VB87_RS10925	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
VB87_RS10940	COG1137	ATPase activity
VB87_RS10965	COG1660	Displays ATPase and GTPase activities
VB87_RS10975	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VB87_RS10980	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VB87_RS10985	COG2239	Acts as a magnesium transporter
VB87_RS11000	COG1113	amino acid transport
VB87_RS11005	COG0840	transmembrane signaling receptor activity
VB87_RS11010	COG0840	transmembrane signaling receptor activity
VB87_RS11015	COG0840	transmembrane signaling receptor activity
VB87_RS11030	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
VB87_RS11035	COG1678	Uncharacterized ACR, COG1678
VB87_RS11040	COG0519	Catalyzes the synthesis of GMP from XMP
VB87_RS11055	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
VB87_RS11095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VB87_RS11105	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
VB87_RS11125	COG2353	YceI-like domain
VB87_RS11130	COG3038	cytochrome b561
VB87_RS11145	COG1760	l-serine dehydratase
VB87_RS11165	COG0527	aspartate kinase activity
VB87_RS11165	COG0460	homoserine dehydrogenase
VB87_RS11170	COG0626	cystathionine gamma-synthase activity
VB87_RS11175	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
VB87_RS11180	COG0739	heme binding
VB87_RS11185	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
VB87_RS11190	COG1272	protein, Hemolysin III
VB87_RS11195	COG0517	IMP dehydrogenase activity
VB87_RS11200	COG0463	Glycosyl transferase, family 2
VB87_RS11210	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
VB87_RS11220	COG4206	TonB-dependent receptor
VB87_RS11260	COG0509	glycine decarboxylation via glycine cleavage system
VB87_RS11265	COG0404	The glycine cleavage system catalyzes the degradation of glycine
VB87_RS11275	COG0330	HflC and HflK could
VB87_RS11285	COG3956	TIGRFAM MazG family protein
VB87_RS11290	COG1218	3'(2'),5'-bisphosphate nucleotidase
VB87_RS11295	COG0494	nUDIX hydrolase
VB87_RS11305	COG1385	rRNA (uridine-N3-)-methyltransferase activity
VB87_RS11320	COG0837	glucose binding
VB87_RS11335	COG1388	LysM domain
VB87_RS11335	COG3858	chitin binding
VB87_RS11340	COG3525	Glycosyl hydrolase, family 20, catalytic domain
VB87_RS11350	COG1472	Belongs to the glycosyl hydrolase 3 family
VB87_RS11360	COG3537	Alpha-1,2-mannosidase
VB87_RS11370	COG5001	Diguanylate cyclase
VB87_RS11390	COG1446	asparaginase
VB87_RS11395	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
VB87_RS11400	COG0523	cobalamin synthesis protein
VB87_RS11410	COG4774	siderophore transport
VB87_RS11435	COG0784	Response regulator, receiver
VB87_RS11435	COG2198	Histidine kinase
VB87_RS11435	COG0643	Histidine kinase
VB87_RS11440	COG0840	transmembrane signaling receptor activity
VB87_RS11445	COG0835	chemotaxis
VB87_RS11460	COG0189	ligase activity
VB87_RS11480	COG1199	ATP-dependent helicase activity
VB87_RS11490	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VB87_RS11495	COG1216	Glycosyl transferase, family 2
VB87_RS11505	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VB87_RS11525	COG1643	Atp-dependent helicase
VB87_RS11530	COG0783	Belongs to the Dps family
VB87_RS11535	COG0514	ATP-dependent DNA helicase (RecQ)
VB87_RS11565	COG0220	tRNA (guanine-N7-)-methyltransferase activity
VB87_RS11570	COG3273	potassium ion transport
VB87_RS11570	COG0471	metal ion transport
VB87_RS11585	COG0179	Fumarylacetoacetate (FAA) hydrolase
VB87_RS11595	COG1609	Transcriptional regulator
VB87_RS11600	COG2963	transposase activity
VB87_RS11670	COG3210	domain, Protein
VB87_RS11675	COG2831	hemolysin activation secretion protein
VB87_RS11680	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VB87_RS11690	COG0438	transferase activity, transferring glycosyl groups
VB87_RS11700	COG2895	sulfate adenylyltransferase (ATP) activity
VB87_RS11700	COG0529	Catalyzes the synthesis of activated sulfate
VB87_RS11705	COG0175	sulfate reduction
VB87_RS11715	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
VB87_RS11720	COG3588	fructose-bisphosphate aldolase
VB87_RS11735	COG0469	pyruvate kinase activity
VB87_RS11750	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VB87_RS11760	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VB87_RS11765	COG0640	Transcriptional regulator
VB87_RS11770	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VB87_RS11770	COG3453	Protein conserved in bacteria
VB87_RS11775	COG0725	ABC transporter, periplasmic molybdate-binding protein
VB87_RS11780	COG4149	molybdate abc transporter
VB87_RS11785	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
VB87_RS11895	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VB87_RS11935	COG0714	Associated with various cellular activities
VB87_RS11965	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
VB87_RS11980	COG0254	rRNA binding
VB87_RS12000	COG2963	transposase activity
VB87_RS12025	COG1280	lysine exporter protein (LysE YggA)
VB87_RS12035	COG0174	glutamine synthetase
VB87_RS12130	COG1475	DNA binding
VB87_RS12165	COG3210	domain, Protein
VB87_RS12180	COG2801	Transposase and inactivated derivatives
VB87_RS12230	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
VB87_RS12235	COG0602	queuosine metabolic process
VB87_RS12245	COG2885	chlorophyll binding
VB87_RS12260	COG0848	biopolymer transport protein
VB87_RS12270	COG0824	Thioesterase
VB87_RS12280	COG3158	transport of potassium into the cell
VB87_RS12285	COG0632	four-way junction helicase activity
VB87_RS12315	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
VB87_RS12345	COG0488	(ABC) transporter
VB87_RS12365	COG2311	Membrane
VB87_RS12375	COG0791	NLP P60 protein
VB87_RS12380	COG0791	NLP P60 protein
VB87_RS12395	COG1301	dicarboxylic acid transport
VB87_RS12400	COG0037	tRNA processing
VB87_RS12405	COG1722	exodeoxyribonuclease VII activity
VB87_RS12410	COG0142	geranyltranstransferase activity
VB87_RS12420	COG0312	modulator of DNA gyrase
VB87_RS12430	COG0312	modulator of DNA gyrase
VB87_RS12460	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VB87_RS12500	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
VB87_RS12515	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
VB87_RS12530	COG0495	leucyl-tRNA aminoacylation
VB87_RS12540	COG3118	belongs to the thioredoxin family
VB87_RS12550	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
VB87_RS12560	COG2040	homocysteine
VB87_RS12570	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VB87_RS12570	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VB87_RS12580	COG2878	Part of a membrane complex involved in electron transport
VB87_RS12595	COG1595	DNA-templated transcription, initiation
VB87_RS12620	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VB87_RS12635	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VB87_RS12640	COG0251	oxidation-reduction process
VB87_RS12645	COG0392	lysyltransferase activity
VB87_RS12665	COG1902	pentaerythritol trinitrate reductase activity
VB87_RS12685	COG2200	EAL domain
VB87_RS12725	COG2198	Histidine kinase
VB87_RS12725	COG0784	Response regulator, receiver
VB87_RS12725	COG2205	protein histidine kinase activity
VB87_RS12790	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
VB87_RS12795	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
VB87_RS12800	COG1472	Belongs to the glycosyl hydrolase 3 family
VB87_RS12810	COG2954	triphosphatase activity
VB87_RS12825	COG1381	Involved in DNA repair and RecF pathway recombination
VB87_RS12830	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
VB87_RS12845	COG0681	Belongs to the peptidase S26 family
VB87_RS12850	COG0481	GTPase activity
VB87_RS12855	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VB87_RS12870	COG1024	Enoyl-CoA hydratase
VB87_RS12870	COG1250	3-hydroxyacyl-CoA dehydrogenase
VB87_RS12880	COG2855	membrane
VB87_RS12945	COG0596	Alpha beta hydrolase
VB87_RS12945	COG0508	dehydrogenase complex catalyzes the overall conversion of
VB87_RS12955	COG0308	aminopeptidase N
VB87_RS12960	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
VB87_RS12970	COG2226	methyltransferase
VB87_RS13000	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
VB87_RS13015	COG0436	Aminotransferase
VB87_RS13020	COG1505	serine-type exopeptidase activity
VB87_RS13035	COG1733	regulation of RNA biosynthetic process
VB87_RS13050	COG0181	hydroxymethylbilane synthase activity
VB87_RS13060	COG0400	carboxylic ester hydrolase activity
VB87_RS13075	COG0784	Response regulator, receiver
VB87_RS13075	COG0835	chemotaxis
VB87_RS13080	COG0297	glycogen (starch) synthase activity
VB87_RS13085	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
VB87_RS13120	COG4191	Histidine kinase
VB87_RS13130	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VB87_RS13185	COG1714	RDD family
VB87_RS13270	COG1475	DNA binding
VB87_RS13385	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
VB87_RS13415	COG1450	Type ii and iii secretion system protein
VB87_RS13430	COG3166	PFAM Fimbrial assembly family protein
VB87_RS13435	COG3156	type II secretion system protein K
VB87_RS13440	COG4795	General secretion pathway protein
VB87_RS13445	COG2165	general secretion pathway protein
VB87_RS13450	COG4970	Tfp pilus assembly protein FimT
VB87_RS13455	COG2165	general secretion pathway protein
VB87_RS13460	COG1459	type II secretion system
VB87_RS13465	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VB87_RS13470	COG1404	Belongs to the peptidase S8 family
VB87_RS13475	COG5295	Hep Hag repeat protein
VB87_RS13480	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VB87_RS13480	COG0047	phosphoribosylformylglycinamidine synthase activity
VB87_RS13485	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VB87_RS13490	COG4974	Belongs to the 'phage' integrase family
VB87_RS13510	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VB87_RS13520	COG0525	valine-tRNA ligase activity
VB87_RS13535	COG1183	phosphatidylcholine synthase activity
VB87_RS13545	COG0442	prolyl-tRNA aminoacylation
VB87_RS13560	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VB87_RS13565	COG1127	ABC transporter
VB87_RS13570	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VB87_RS13570	COG3218	ABC-type transport auxiliary lipoprotein component
VB87_RS13585	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
VB87_RS13585	COG0644	oxidoreductase
VB87_RS13635	COG2086	electron transfer activity
VB87_RS13670	COG0438	transferase activity, transferring glycosyl groups
VB87_RS13705	COG0626	cystathionine gamma-synthase activity
VB87_RS13735	COG0625	glutathione transferase activity
VB87_RS13745	COG0513	Belongs to the DEAD box helicase family
VB87_RS13750	COG0720	synthase
VB87_RS13760	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
VB87_RS13765	COG1956	GAF domain-containing protein
VB87_RS13775	COG4206	TonB-dependent receptor
VB87_RS13780	COG0546	phosphoglycolate phosphatase activity
VB87_RS13785	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
VB87_RS13790	COG0339	signal peptide processing
VB87_RS13795	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
VB87_RS13815	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VB87_RS13830	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
VB87_RS13850	COG3104	oligopeptide transport
VB87_RS13855	COG3483	tryptophan 2,3-dioxygenase activity
VB87_RS13865	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VB87_RS13875	COG3264	Mechanosensitive ion channel
VB87_RS13875	COG1196	nuclear chromosome segregation
VB87_RS13910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VB87_RS13915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VB87_RS13925	COG2096	Adenosyltransferase
VB87_RS13940	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VB87_RS13945	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VB87_RS13955	COG2967	ApaG domain
VB87_RS13960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
VB87_RS13985	COG0861	Integral membrane protein TerC family
VB87_RS13990	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VB87_RS13995	COG0642	Histidine kinase
VB87_RS14010	COG4181	ATPase activity
VB87_RS14015	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
VB87_RS14025	COG4771	TonB-dependent receptor
VB87_RS14035	COG0667	Aldo Keto reductase
VB87_RS14040	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VB87_RS14060	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VB87_RS14070	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VB87_RS14090	COG2226	methyltransferase
VB87_RS14130	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VB87_RS14135	COG0494	nUDIX hydrolase
VB87_RS14145	COG0653	protein targeting
VB87_RS14150	COG0739	heme binding
VB87_RS14160	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
VB87_RS14175	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
VB87_RS14180	COG1181	Belongs to the D-alanine--D-alanine ligase family
VB87_RS14190	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
VB87_RS14205	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
VB87_RS14220	COG3116	cell division
VB87_RS14225	COG0275	rRNA processing
VB87_RS14230	COG2001	Belongs to the MraZ family
VB87_RS14250	COG0277	FAD linked oxidase domain protein
VB87_RS14255	COG0745	RESPONSE REGULATOR receiver
VB87_RS14260	COG2205	protein histidine kinase activity
VB87_RS14270	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
VB87_RS14275	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
VB87_RS14290	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
VB87_RS14295	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VB87_RS14300	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
VB87_RS14315	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VB87_RS14315	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VB87_RS14330	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VB87_RS14340	COG0488	(ABC) transporter
VB87_RS14345	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VB87_RS14350	COG1490	D-aminoacyl-tRNA deacylase activity
VB87_RS14390	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
VB87_RS14395	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VB87_RS14395	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VB87_RS14405	COG0242	peptide deformylase activity
VB87_RS14410	COG1652	LysM domain
VB87_RS14415	COG0758	DNA mediated transformation
VB87_RS14420	COG2922	Belongs to the Smg family
VB87_RS14430	COG1714	RDD family
VB87_RS14435	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VB87_RS14435	COG1754	DNA topoisomerase type I activity
VB87_RS14440	COG0009	L-threonylcarbamoyladenylate synthase
VB87_RS14455	COG1028	Short-chain dehydrogenase reductase Sdr
VB87_RS14465	COG0616	signal peptide processing
VB87_RS14470	COG0534	Mate efflux family protein
VB87_RS14480	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
VB87_RS14490	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VB87_RS14495	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
VB87_RS14500	COG2201	protein-glutamate methylesterase activity
VB87_RS14505	COG2177	Part of the ABC transporter FtsEX involved in
VB87_RS14510	COG2884	Cell division ATP-binding protein ftsE
VB87_RS14520	COG3118	belongs to the thioredoxin family
VB87_RS14525	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
VB87_RS14570	COG1518	maintenance of DNA repeat elements
VB87_RS14575	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
VB87_RS14580	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VB87_RS14590	COG0577	efflux transmembrane transporter activity
VB87_RS14590	COG1136	(ABC) transporter
VB87_RS14600	COG1136	(ABC) transporter
VB87_RS14600	COG0577	efflux transmembrane transporter activity
VB87_RS14605	COG0577	efflux transmembrane transporter activity
VB87_RS14610	COG0577	efflux transmembrane transporter activity
VB87_RS14620	COG4191	Histidine kinase
VB87_RS14625	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
VB87_RS14640	COG0355	proton-transporting ATP synthase activity, rotational mechanism
VB87_RS14645	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
VB87_RS14655	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VB87_RS14660	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VB87_RS14665	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
VB87_RS14675	COG0356	it plays a direct role in the translocation of protons across the membrane
VB87_RS14685	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VB87_RS14690	COG0508	dehydrogenase complex catalyzes the overall conversion of
VB87_RS14725	COG0697	spore germination
VB87_RS14730	COG1666	GTP binding
VB87_RS14740	COG1187	pseudouridine synthase activity
VB87_RS14770	COG2801	Transposase and inactivated derivatives
VB87_RS14785	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VB87_RS14795	COG0793	Belongs to the peptidase S41A family
VB87_RS14800	COG2963	transposase activity
VB87_RS14865	COG0025	NhaP-type Na H and K H
VB87_RS14875	COG3384	dioxygenase
VB87_RS14880	COG0583	DNA-binding transcription factor activity
VB87_RS14890	COG0667	Aldo Keto reductase
VB87_RS14900	COG3706	GGDEF domain
VB87_RS14915	COG4774	siderophore transport
VB87_RS14935	COG0531	amino acid
VB87_RS14940	COG5297	Belongs to the glycosyl hydrolase family 6
VB87_RS14940	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
VB87_RS14950	COG5297	Belongs to the glycosyl hydrolase family 6
VB87_RS14950	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
VB87_RS14955	COG0612	Peptidase, M16
VB87_RS14980	COG1113	amino acid transport
VB87_RS14985	COG0697	spore germination
VB87_RS15010	COG3511	phospholipase C
VB87_RS15015	COG0628	permease
VB87_RS15045	COG1199	ATP-dependent helicase activity
VB87_RS15050	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
VB87_RS15090	COG0625	glutathione transferase activity
VB87_RS15110	COG4555	ABC transporter
VB87_RS15120	COG0543	2 iron, 2 sulfur cluster binding
VB87_RS15120	COG0633	Ferredoxin
VB87_RS15125	COG1131	(ABC) transporter
VB87_RS15130	COG0842	Transport permease protein
VB87_RS15145	COG1643	Atp-dependent helicase
VB87_RS15175	COG1187	pseudouridine synthase activity
VB87_RS15190	COG2130	NADP-dependent
VB87_RS15195	COG1414	Transcriptional regulator
VB87_RS15210	COG1131	(ABC) transporter
VB87_RS15215	COG4771	TonB-dependent receptor
VB87_RS15220	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
VB87_RS15225	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
VB87_RS15235	COG3485	protocatechuate 3,4-dioxygenase
VB87_RS15240	COG3485	protocatechuate 3,4-dioxygenase
VB87_RS15250	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
VB87_RS15310	COG1022	Amp-dependent synthetase and ligase
VB87_RS15315	COG1024	Enoyl-CoA hydratase
VB87_RS15320	COG0659	secondary active sulfate transmembrane transporter activity
VB87_RS15325	COG2199	diguanylate cyclase activity
VB87_RS15390	COG0339	signal peptide processing
VB87_RS15425	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VB87_RS15430	COG0318	PFAM AMP-dependent synthetase and ligase
VB87_RS15435	COG0727	PFAM Uncharacterised protein family (UPF0153)
VB87_RS15445	COG0596	Alpha beta hydrolase
VB87_RS15450	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VB87_RS15480	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
VB87_RS15530	COG2204	response regulator
VB87_RS15535	COG3852	Histidine kinase
VB87_RS15540	COG0004	ammonium transporteR
VB87_RS15545	COG0347	Belongs to the P(II) protein family
VB87_RS15555	COG0174	glutamine synthetase
VB87_RS15585	COG2050	protein possibly involved in aromatic compounds catabolism
VB87_RS15590	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VB87_RS15600	COG2062	phosphohistidine phosphatase, SixA
VB87_RS15640	COG2271	Major facilitator Superfamily
VB87_RS15660	COG1205	dead DEAH box helicase
VB87_RS15660	COG1111	helicase
VB87_RS15675	COG0069	glutamate synthase activity
VB87_RS15675	COG0070	glutamate synthase
VB87_RS15675	COG0067	glutamate synthase
VB87_RS15680	COG0493	'glutamate synthase
VB87_RS15685	COG1803	Methylglyoxal synthase
VB87_RS15715	COG3135	benzoate transporter
VB87_RS15735	COG2951	lytic endotransglycosylase activity
VB87_RS15745	COG0730	response to heat
VB87_RS15770	COG0302	gtp cyclohydrolase
VB87_RS15775	COG0477	Major facilitator Superfamily
VB87_RS15780	COG0840	transmembrane signaling receptor activity
VB87_RS15795	COG3132	Protein of unknown function, DUF480
VB87_RS15800	COG0729	surface antigen
VB87_RS15805	COG2911	Protein conserved in bacteria
VB87_RS15810	COG0473	3-isopropylmalate dehydrogenase activity
VB87_RS15830	COG1752	Esterase of the alpha-beta hydrolase superfamily
VB87_RS15835	COG1473	amidohydrolase
VB87_RS15845	COG0861	Integral membrane protein TerC family
VB87_RS15850	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VB87_RS15880	COG0531	amino acid
VB87_RS15885	COG4566	intracellular signal transduction
VB87_RS15890	COG4191	Histidine kinase
VB87_RS15895	COG1285	pathogenesis
VB87_RS15920	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
VB87_RS15925	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
VB87_RS15940	COG0210	DNA helicase
VB87_RS15950	COG1122	ATPase activity
VB87_RS15955	COG1733	regulation of RNA biosynthetic process
VB87_RS15980	COG0594	ribonuclease P activity