XB05_RS00175	PWY-5386	methylglyoxal degradation I
XB05_RS00215	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
XB05_RS00215	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
XB05_RS00225	PWY-6823	molybdenum cofactor biosynthesis
XB05_RS00240	PWY-6823	molybdenum cofactor biosynthesis
XB05_RS00320	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS00330	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS00330	PWY-6799	fatty acid biosynthesis (plant mitochondria)
XB05_RS00330	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS00335	PWY-5367	petroselinate biosynthesis
XB05_RS00335	PWY-5515	L-arabinose degradation II
XB05_RS00335	PWY-5525	D-glucuronate degradation I
XB05_RS00335	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XB05_RS00335	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XB05_RS00335	PWY-5989	stearate biosynthesis II (bacteria and plants)
XB05_RS00335	PWY-5994	palmitate biosynthesis I (animals and fungi)
XB05_RS00335	PWY-6113	superpathway of mycolate biosynthesis
XB05_RS00335	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XB05_RS00335	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS00335	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS00335	PWY-7663	gondoate biosynthesis (anaerobic)
XB05_RS00335	PWY-7664	oleate biosynthesis IV (anaerobic)
XB05_RS00335	PWYG-321	mycolate biosynthesis
XB05_RS00350	PWY-5958	acridone alkaloid biosynthesis
XB05_RS00350	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XB05_RS00350	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XB05_RS00385	PWY-5747	2-methylcitrate cycle II
XB05_RS00495	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS00680	PWY-6986	alginate degradation
XB05_RS00680	PWY-7651	heparan sulfate degradation
XB05_RS01035	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
XB05_RS01035	PWY-6167	flavin biosynthesis II (archaea)
XB05_RS01035	PWY-6168	flavin biosynthesis III (fungi)
XB05_RS01065	PWY-3781	aerobic respiration I (cytochrome c)
XB05_RS01065	PWY-4521	arsenite oxidation I (respiratory)
XB05_RS01065	PWY-6692	Fe(II) oxidation
XB05_RS01065	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XB05_RS01065	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
XB05_RS01230	PWY-6317	galactose degradation I (Leloir pathway)
XB05_RS01245	PWY-723	alkylnitronates degradation
XB05_RS01265	PWY-6829	tRNA methylation (yeast)
XB05_RS01265	PWY-7285	methylwyosine biosynthesis
XB05_RS01265	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
XB05_RS01285	PWY-5506	methanol oxidation to formaldehyde IV
XB05_RS01475	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS01495	PWY-5642	2,4-dinitrotoluene degradation
XB05_RS01495	PWY-6373	acrylate degradation
XB05_RS01550	PWY-1361	benzoyl-CoA degradation I (aerobic)
XB05_RS01550	PWY-5109	2-methylbutanoate biosynthesis
XB05_RS01550	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XB05_RS01550	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XB05_RS01550	PWY-5177	glutaryl-CoA degradation
XB05_RS01550	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XB05_RS01550	PWY-6435	4-hydroxybenzoate biosynthesis V
XB05_RS01550	PWY-6583	pyruvate fermentation to butanol I
XB05_RS01550	PWY-6863	pyruvate fermentation to hexanol
XB05_RS01550	PWY-6883	pyruvate fermentation to butanol II
XB05_RS01550	PWY-6944	androstenedione degradation
XB05_RS01550	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XB05_RS01550	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XB05_RS01550	PWY-7007	methyl ketone biosynthesis
XB05_RS01550	PWY-7046	4-coumarate degradation (anaerobic)
XB05_RS01550	PWY-7094	fatty acid salvage
XB05_RS01550	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XB05_RS01550	PWY-735	jasmonic acid biosynthesis
XB05_RS01550	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XB05_RS01550	PWY-7606	docosahexaenoate biosynthesis III (mammals)
XB05_RS01550	PWY-7726	XB05_RS01550
XB05_RS01630	PWY-6902	chitin degradation II
XB05_RS02015	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS02015	PWY-5743	3-hydroxypropanoate cycle
XB05_RS02015	PWY-5744	glyoxylate assimilation
XB05_RS02015	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XB05_RS02015	PWY-6679	jadomycin biosynthesis
XB05_RS02015	PWY-6722	candicidin biosynthesis
XB05_RS02015	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS02030	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XB05_RS02030	PWY-622	starch biosynthesis
XB05_RS02040	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XB05_RS02040	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XB05_RS02040	PWY-5989	stearate biosynthesis II (bacteria and plants)
XB05_RS02040	PWY-5994	palmitate biosynthesis I (animals and fungi)
XB05_RS02040	PWY-6113	superpathway of mycolate biosynthesis
XB05_RS02040	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XB05_RS02040	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS02040	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS02040	PWY-7663	gondoate biosynthesis (anaerobic)
XB05_RS02040	PWY-7664	oleate biosynthesis IV (anaerobic)
XB05_RS02040	PWYG-321	mycolate biosynthesis
XB05_RS02065	PWY-7294	xylose degradation IV
XB05_RS02065	PWY-7295	L-arabinose degradation IV
XB05_RS02065	PWY-7560	methylerythritol phosphate pathway II
XB05_RS02070	PWY-5667	CDP-diacylglycerol biosynthesis I
XB05_RS02070	PWY-5981	CDP-diacylglycerol biosynthesis III
XB05_RS02300	PWY-5392	reductive TCA cycle II
XB05_RS02300	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XB05_RS02300	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS02300	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS02300	PWY-6728	methylaspartate cycle
XB05_RS02300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS02300	PWY-7254	TCA cycle VII (acetate-producers)
XB05_RS02300	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XB05_RS02315	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XB05_RS02315	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS02315	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XB05_RS02315	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XB05_RS02320	PWY-6803	phosphatidylcholine acyl editing
XB05_RS02320	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
XB05_RS02320	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
XB05_RS02320	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
XB05_RS02720	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XB05_RS02720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XB05_RS02725	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
XB05_RS02770	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XB05_RS02770	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XB05_RS02775	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XB05_RS02780	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XB05_RS02800	PWY-6123	inosine-5'-phosphate biosynthesis I
XB05_RS02800	PWY-6124	inosine-5'-phosphate biosynthesis II
XB05_RS02800	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS02800	PWY-7234	inosine-5'-phosphate biosynthesis III
XB05_RS02810	PWY-5392	reductive TCA cycle II
XB05_RS02810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XB05_RS02810	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS02810	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS02810	PWY-6728	methylaspartate cycle
XB05_RS02810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS02810	PWY-7254	TCA cycle VII (acetate-producers)
XB05_RS02810	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XB05_RS02860	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
XB05_RS02905	PWY-2201	folate transformations I
XB05_RS02905	PWY-3841	folate transformations II
XB05_RS02940	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XB05_RS03010	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XB05_RS03010	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS03010	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XB05_RS03010	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XB05_RS03080	PWY-6825	phosphatidylcholine biosynthesis V
XB05_RS03085	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
XB05_RS03085	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XB05_RS03085	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
XB05_RS03090	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS03090	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XB05_RS03090	PWY-6596	adenosine nucleotides degradation I
XB05_RS03090	PWY-6606	guanosine nucleotides degradation II
XB05_RS03090	PWY-6607	guanosine nucleotides degradation I
XB05_RS03090	PWY-6608	guanosine nucleotides degradation III
XB05_RS03090	PWY-7185	UTP and CTP dephosphorylation I
XB05_RS03115	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XB05_RS03115	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XB05_RS03115	PWY-7717	XB05_RS03115
XB05_RS03120	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XB05_RS03120	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XB05_RS03130	PWY-5647	2-nitrobenzoate degradation I
XB05_RS03130	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
XB05_RS03130	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
XB05_RS03130	PWY-6505	L-tryptophan degradation XII (Geobacillus)
XB05_RS03135	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XB05_RS03135	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS03135	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XB05_RS03135	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XB05_RS03220	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XB05_RS03220	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
XB05_RS03245	PWY-5028	L-histidine degradation II
XB05_RS03245	PWY-5030	L-histidine degradation III
XB05_RS03255	PWY-5028	L-histidine degradation II
XB05_RS03255	PWY-5030	L-histidine degradation III
XB05_RS03260	PWY-5028	L-histidine degradation II
XB05_RS03260	PWY-5030	L-histidine degradation III
XB05_RS03310	PWY-3461	L-tyrosine biosynthesis II
XB05_RS03310	PWY-3462	L-phenylalanine biosynthesis II
XB05_RS03310	PWY-6120	L-tyrosine biosynthesis III
XB05_RS03310	PWY-6627	salinosporamide A biosynthesis
XB05_RS03310	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
XB05_RS03310	PWY-7626	bacilysin biosynthesis
XB05_RS03315	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XB05_RS03330	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
XB05_RS03490	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
XB05_RS03490	PWY-7688	XB05_RS03490
XB05_RS03635	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XB05_RS03635	PWY-7177	UTP and CTP dephosphorylation II
XB05_RS03635	PWY-7185	UTP and CTP dephosphorylation I
XB05_RS03640	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XB05_RS03640	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XB05_RS03650	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS03650	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS03650	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS03650	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS03650	PWY-5723	Rubisco shunt
XB05_RS03650	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS03650	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS03650	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS03650	PWY-7003	glycerol degradation to butanol
XB05_RS03650	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS03650	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS03660	PWY-7560	methylerythritol phosphate pathway II
XB05_RS03665	PWY-7560	methylerythritol phosphate pathway II
XB05_RS03680	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS03680	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XB05_RS03680	PWY-6596	adenosine nucleotides degradation I
XB05_RS03680	PWY-6606	guanosine nucleotides degradation II
XB05_RS03680	PWY-6607	guanosine nucleotides degradation I
XB05_RS03680	PWY-6608	guanosine nucleotides degradation III
XB05_RS03680	PWY-7185	UTP and CTP dephosphorylation I
XB05_RS03720	PWY-6614	tetrahydrofolate biosynthesis
XB05_RS03725	PWY-2781	<i>cis</i>-zeatin biosynthesis
XB05_RS03820	PWY-6910	hydroxymethylpyrimidine salvage
XB05_RS03820	PWY-7356	thiamin salvage IV (yeast)
XB05_RS03820	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XB05_RS03855	PWY-2941	L-lysine biosynthesis II
XB05_RS03855	PWY-2942	L-lysine biosynthesis III
XB05_RS03855	PWY-5097	L-lysine biosynthesis VI
XB05_RS03870	PWY-7130	L-glucose degradation
XB05_RS03880	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS03880	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS03880	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS03880	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS03880	PWY-5723	Rubisco shunt
XB05_RS03880	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS03880	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS03880	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS03880	PWY-7003	glycerol degradation to butanol
XB05_RS03880	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS03880	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS03885	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS03885	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XB05_RS03885	PWY-7242	D-fructuronate degradation
XB05_RS03885	PWY-7310	D-glucosaminate degradation
XB05_RS03885	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
XB05_RS03910	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS03915	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS03930	PWY-4261	glycerol degradation I
XB05_RS03965	PWY-5663	tetrahydrobiopterin biosynthesis I
XB05_RS03965	PWY-5664	tetrahydrobiopterin biosynthesis II
XB05_RS03965	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XB05_RS03965	PWY-6703	preQ<sub>0</sub> biosynthesis
XB05_RS03965	PWY-6983	tetrahydrobiopterin biosynthesis III
XB05_RS03965	PWY-7442	drosopterin and aurodrosopterin biosynthesis
XB05_RS03980	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XB05_RS03980	PWY-6148	tetrahydromethanopterin biosynthesis
XB05_RS03980	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XB05_RS03980	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XB05_RS03985	PWY-6654	phosphopantothenate biosynthesis III
XB05_RS03995	PWY-5155	&beta;-alanine biosynthesis III
XB05_RS04000	PWY-3801	sucrose degradation II (sucrose synthase)
XB05_RS04000	PWY-5054	sorbitol biosynthesis I
XB05_RS04000	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
XB05_RS04000	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XB05_RS04000	PWY-5659	GDP-mannose biosynthesis
XB05_RS04000	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS04000	PWY-621	sucrose degradation III (sucrose invertase)
XB05_RS04000	PWY-622	starch biosynthesis
XB05_RS04000	PWY-6981	chitin biosynthesis
XB05_RS04000	PWY-6992	1,5-anhydrofructose degradation
XB05_RS04000	PWY-7238	sucrose biosynthesis II
XB05_RS04000	PWY-7347	sucrose biosynthesis III
XB05_RS04000	PWY-7385	1,3-propanediol biosynthesis (engineered)
XB05_RS04075	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XB05_RS04075	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XB05_RS04080	PWY-5686	UMP biosynthesis
XB05_RS04220	PWY-2941	L-lysine biosynthesis II
XB05_RS04220	PWY-2942	L-lysine biosynthesis III
XB05_RS04220	PWY-5097	L-lysine biosynthesis VI
XB05_RS04220	PWY-6559	spermidine biosynthesis II
XB05_RS04220	PWY-6562	norspermidine biosynthesis
XB05_RS04220	PWY-7153	grixazone biosynthesis
XB05_RS04225	PWY-702	L-methionine biosynthesis II
XB05_RS04320	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XB05_RS04320	PWY-5389	3-methylthiopropanoate biosynthesis
XB05_RS04325	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
XB05_RS04325	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XB05_RS04325	PWY-6416	quinate degradation II
XB05_RS04325	PWY-6707	gallate biosynthesis
XB05_RS04430	PWY-2941	L-lysine biosynthesis II
XB05_RS04430	PWY-2942	L-lysine biosynthesis III
XB05_RS04430	PWY-5097	L-lysine biosynthesis VI
XB05_RS04435	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XB05_RS04435	PWY-5686	UMP biosynthesis
XB05_RS04435	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XB05_RS04445	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XB05_RS04445	PWY-5686	UMP biosynthesis
XB05_RS04445	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XB05_RS04530	PWY-5747	2-methylcitrate cycle II
XB05_RS04815	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS04850	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XB05_RS04895	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS05110	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS05110	PWY-181	photorespiration
XB05_RS05110	PWY-2161	folate polyglutamylation
XB05_RS05110	PWY-2201	folate transformations I
XB05_RS05110	PWY-3661	glycine betaine degradation I
XB05_RS05110	PWY-3661-1	glycine betaine degradation II (mammalian)
XB05_RS05110	PWY-3841	folate transformations II
XB05_RS05110	PWY-5497	purine nucleobases degradation II (anaerobic)
XB05_RS05135	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XB05_RS05475	PWY-1361	benzoyl-CoA degradation I (aerobic)
XB05_RS05475	PWY-5109	2-methylbutanoate biosynthesis
XB05_RS05475	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
XB05_RS05475	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
XB05_RS05475	PWY-5177	glutaryl-CoA degradation
XB05_RS05475	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XB05_RS05475	PWY-6435	4-hydroxybenzoate biosynthesis V
XB05_RS05475	PWY-6583	pyruvate fermentation to butanol I
XB05_RS05475	PWY-6863	pyruvate fermentation to hexanol
XB05_RS05475	PWY-6883	pyruvate fermentation to butanol II
XB05_RS05475	PWY-6944	androstenedione degradation
XB05_RS05475	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XB05_RS05475	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XB05_RS05475	PWY-7007	methyl ketone biosynthesis
XB05_RS05475	PWY-7046	4-coumarate degradation (anaerobic)
XB05_RS05475	PWY-7094	fatty acid salvage
XB05_RS05475	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XB05_RS05475	PWY-735	jasmonic acid biosynthesis
XB05_RS05475	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
XB05_RS05475	PWY-7606	docosahexaenoate biosynthesis III (mammals)
XB05_RS05475	PWY-7726	XB05_RS05475
XB05_RS05485	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XB05_RS05485	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
XB05_RS05485	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS05485	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS05485	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
XB05_RS05485	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XB05_RS05485	PWY-7205	CMP phosphorylation
XB05_RS05485	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XB05_RS05485	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS05485	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS05485	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS05485	PWY-7224	purine deoxyribonucleosides salvage
XB05_RS05485	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS05485	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XB05_RS05490	PWY-2201	folate transformations I
XB05_RS05520	PWY-6823	molybdenum cofactor biosynthesis
XB05_RS05560	PWY-6823	molybdenum cofactor biosynthesis
XB05_RS05565	PWY-5964	guanylyl molybdenum cofactor biosynthesis
XB05_RS05565	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
XB05_RS05575	PWY-5194	siroheme biosynthesis
XB05_RS05575	PWY-5441	S-methyl-L-methionine cycle
XB05_RS05575	PWY-702	L-methionine biosynthesis II
XB05_RS05575	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
XB05_RS05595	PWY-6683	sulfate reduction III (assimilatory)
XB05_RS05610	PWY-5194	siroheme biosynthesis
XB05_RS05610	PWY-5441	S-methyl-L-methionine cycle
XB05_RS05610	PWY-702	L-methionine biosynthesis II
XB05_RS05610	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
XB05_RS05815	PWY-7158	L-phenylalanine degradation V
XB05_RS05890	PWY-5269	cardiolipin biosynthesis II
XB05_RS05890	PWY-5668	cardiolipin biosynthesis I
XB05_RS05910	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XB05_RS05965	PWY-3781	aerobic respiration I (cytochrome c)
XB05_RS05965	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XB05_RS05965	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XB05_RS05965	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS05965	PWY-6728	methylaspartate cycle
XB05_RS05965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS05965	PWY-7254	TCA cycle VII (acetate-producers)
XB05_RS05965	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XB05_RS05975	PWY-3781	aerobic respiration I (cytochrome c)
XB05_RS05975	PWY-4302	aerobic respiration III (alternative oxidase pathway)
XB05_RS05975	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XB05_RS05975	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS05975	PWY-6728	methylaspartate cycle
XB05_RS05975	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS05975	PWY-7254	TCA cycle VII (acetate-producers)
XB05_RS05975	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XB05_RS06000	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XB05_RS06005	PWY-2722	trehalose degradation IV
XB05_RS06005	PWY-2723	trehalose degradation V
XB05_RS06005	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XB05_RS06005	PWY-5661	GDP-glucose biosynthesis
XB05_RS06005	PWY-621	sucrose degradation III (sucrose invertase)
XB05_RS06005	PWY-7238	sucrose biosynthesis II
XB05_RS06005	PWY-7385	1,3-propanediol biosynthesis (engineered)
XB05_RS06010	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XB05_RS06010	PWY-6855	chitin degradation I (archaea)
XB05_RS06010	PWY-6906	chitin derivatives degradation
XB05_RS06015	PWY-5101	L-isoleucine biosynthesis II
XB05_RS06015	PWY-5103	L-isoleucine biosynthesis III
XB05_RS06015	PWY-5104	L-isoleucine biosynthesis IV
XB05_RS06015	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XB05_RS06020	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS06020	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XB05_RS06020	PWY-7242	D-fructuronate degradation
XB05_RS06020	PWY-7310	D-glucosaminate degradation
XB05_RS06020	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
XB05_RS06135	PWY-6502	oxidized GTP and dGTP detoxification
XB05_RS06150	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS06505	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS06510	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
XB05_RS06510	PWY-6596	adenosine nucleotides degradation I
XB05_RS06510	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS06515	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
XB05_RS06515	PWY-2201	folate transformations I
XB05_RS06515	PWY-3841	folate transformations II
XB05_RS06515	PWY-5030	L-histidine degradation III
XB05_RS06515	PWY-5497	purine nucleobases degradation II (anaerobic)
XB05_RS06515	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XB05_RS06530	PWY-3801	sucrose degradation II (sucrose synthase)
XB05_RS06530	PWY-6527	stachyose degradation
XB05_RS06530	PWY-7238	sucrose biosynthesis II
XB05_RS06530	PWY-7343	UDP-glucose biosynthesis
XB05_RS06540	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XB05_RS06540	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XB05_RS06540	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XB05_RS06565	PWY-7205	CMP phosphorylation
XB05_RS06580	PWY-43	putrescine biosynthesis II
XB05_RS06605	PWY-5941	glycogen degradation II (eukaryotic)
XB05_RS06605	PWY-6724	starch degradation II
XB05_RS06605	PWY-6737	starch degradation V
XB05_RS06605	PWY-7238	sucrose biosynthesis II
XB05_RS06735	PWY-5344	L-homocysteine biosynthesis
XB05_RS06765	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
XB05_RS06785	PWY-3341	L-proline biosynthesis III
XB05_RS06785	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XB05_RS06790	PWY-3341	L-proline biosynthesis III
XB05_RS06790	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XB05_RS06805	PWY-4983	L-citrulline-nitric oxide cycle
XB05_RS06805	PWY-4984	urea cycle
XB05_RS06805	PWY-5	canavanine biosynthesis
XB05_RS06805	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XB05_RS06805	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XB05_RS06810	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XB05_RS06810	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XB05_RS06820	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XB05_RS06820	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XB05_RS06830	PWY-4983	L-citrulline-nitric oxide cycle
XB05_RS06830	PWY-4984	urea cycle
XB05_RS06830	PWY-5	canavanine biosynthesis
XB05_RS06830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XB05_RS06830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XB05_RS06835	PWY-5686	UMP biosynthesis
XB05_RS06875	PWY-5686	UMP biosynthesis
XB05_RS06910	PWY-1081	homogalacturonan degradation
XB05_RS06910	PWY-7246	pectin degradation II
XB05_RS06910	PWY-7248	pectin degradation III
XB05_RS06920	PWY-181	photorespiration
XB05_RS06925	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
XB05_RS06925	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
XB05_RS06925	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
XB05_RS06925	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
XB05_RS06925	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
XB05_RS06925	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
XB05_RS06925	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
XB05_RS06925	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
XB05_RS06925	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
XB05_RS06925	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
XB05_RS06960	PWY-6004	glycine betaine biosynthesis V (from glycine)
XB05_RS06965	PWY-2301	<i>myo</i>-inositol biosynthesis
XB05_RS06965	PWY-4702	phytate degradation I
XB05_RS06965	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
XB05_RS06970	PWY-6854	ethylene biosynthesis III (microbes)
XB05_RS06995	PWY-6605	adenine and adenosine salvage II
XB05_RS06995	PWY-6610	adenine and adenosine salvage IV
XB05_RS07050	PWY-5676	acetyl-CoA fermentation to butanoate II
XB05_RS07050	PWY-5741	ethylmalonyl-CoA pathway
XB05_RS07050	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XB05_RS07085	PWY-6938	NADH repair
XB05_RS07090	PWY-6700	queuosine biosynthesis
XB05_RS07175	PWY-3781	aerobic respiration I (cytochrome c)
XB05_RS07175	PWY-6692	Fe(II) oxidation
XB05_RS07175	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
XB05_RS07175	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XB05_RS07280	PWY-381	nitrate reduction II (assimilatory)
XB05_RS07280	PWY-5675	nitrate reduction V (assimilatory)
XB05_RS07280	PWY-6549	L-glutamine biosynthesis III
XB05_RS07280	PWY-6963	ammonia assimilation cycle I
XB05_RS07280	PWY-6964	ammonia assimilation cycle II
XB05_RS07290	PWY-381	nitrate reduction II (assimilatory)
XB05_RS07290	PWY-5675	nitrate reduction V (assimilatory)
XB05_RS07290	PWY-6549	L-glutamine biosynthesis III
XB05_RS07290	PWY-6963	ammonia assimilation cycle I
XB05_RS07290	PWY-6964	ammonia assimilation cycle II
XB05_RS07410	PWY-5022	4-aminobutanoate degradation V
XB05_RS07410	PWY-6728	methylaspartate cycle
XB05_RS07410	PWY-7126	ethylene biosynthesis IV
XB05_RS07470	PWY-6700	queuosine biosynthesis
XB05_RS07475	PWY-6700	queuosine biosynthesis
XB05_RS07500	PWY-4702	phytate degradation I
XB05_RS07510	PWY-7183	pyrimidine nucleobases salvage I
XB05_RS07515	PWY-6788	cellulose degradation II (fungi)
XB05_RS07520	PWY-4041	&gamma;-glutamyl cycle
XB05_RS07520	PWY-5826	hypoglycin biosynthesis
XB05_RS07545	PWY-6825	phosphatidylcholine biosynthesis V
XB05_RS07585	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS07715	PWY-6891	thiazole biosynthesis II (Bacillus)
XB05_RS07715	PWY-6892	thiazole biosynthesis I (E. coli)
XB05_RS07715	PWY-7560	methylerythritol phosphate pathway II
XB05_RS07720	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XB05_RS07720	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XB05_RS07720	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XB05_RS07720	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XB05_RS07730	PWY-5129	sphingolipid biosynthesis (plants)
XB05_RS07745	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS07760	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XB05_RS07760	PWY-622	starch biosynthesis
XB05_RS07805	PWY-6655	xanthan biosynthesis
XB05_RS07805	PWY-6658	acetan biosynthesis
XB05_RS08070	PWY-6854	ethylene biosynthesis III (microbes)
XB05_RS08080	PWY-6123	inosine-5'-phosphate biosynthesis I
XB05_RS08080	PWY-7234	inosine-5'-phosphate biosynthesis III
XB05_RS08090	PWY-5316	nicotine biosynthesis
XB05_RS08090	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS08090	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XB05_RS08090	PWY-7342	superpathway of nicotine biosynthesis
XB05_RS08220	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS08220	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS08220	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS08220	PWY-7003	glycerol degradation to butanol
XB05_RS08255	PWY-6749	CMP-legionaminate biosynthesis I
XB05_RS08260	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS08260	PWY-5743	3-hydroxypropanoate cycle
XB05_RS08260	PWY-5744	glyoxylate assimilation
XB05_RS08260	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XB05_RS08260	PWY-6679	jadomycin biosynthesis
XB05_RS08260	PWY-6722	candicidin biosynthesis
XB05_RS08260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS08305	PWY-2941	L-lysine biosynthesis II
XB05_RS08305	PWY-2942	L-lysine biosynthesis III
XB05_RS08305	PWY-5097	L-lysine biosynthesis VI
XB05_RS08305	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
XB05_RS08305	PWY-6559	spermidine biosynthesis II
XB05_RS08305	PWY-6562	norspermidine biosynthesis
XB05_RS08305	PWY-7153	grixazone biosynthesis
XB05_RS08305	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
XB05_RS08315	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XB05_RS08335	PWY-5669	phosphatidylethanolamine biosynthesis I
XB05_RS08510	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS08600	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
XB05_RS08600	PWY-5491	diethylphosphate degradation
XB05_RS08700	PWY-6825	phosphatidylcholine biosynthesis V
XB05_RS08720	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS08720	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XB05_RS09055	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XB05_RS09170	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS09170	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS09285	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XB05_RS09285	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XB05_RS09300	PWY-2941	L-lysine biosynthesis II
XB05_RS09300	PWY-2942	L-lysine biosynthesis III
XB05_RS09300	PWY-5097	L-lysine biosynthesis VI
XB05_RS09300	PWY-6559	spermidine biosynthesis II
XB05_RS09300	PWY-6562	norspermidine biosynthesis
XB05_RS09300	PWY-7153	grixazone biosynthesis
XB05_RS09325	PWY-5686	UMP biosynthesis
XB05_RS09365	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XB05_RS09370	PWY-3341	L-proline biosynthesis III
XB05_RS09370	PWY-4981	L-proline biosynthesis II (from arginine)
XB05_RS09370	PWY-6344	L-ornithine degradation II (Stickland reaction)
XB05_RS09430	PWY-6823	molybdenum cofactor biosynthesis
XB05_RS09430	PWY-6891	thiazole biosynthesis II (Bacillus)
XB05_RS09430	PWY-6892	thiazole biosynthesis I (E. coli)
XB05_RS09430	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
XB05_RS09535	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XB05_RS09535	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XB05_RS09535	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XB05_RS09545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XB05_RS09545	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
XB05_RS09565	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XB05_RS09565	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XB05_RS09580	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XB05_RS09580	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XB05_RS09665	PWY-7533	gliotoxin biosynthesis
XB05_RS09785	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
XB05_RS09785	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XB05_RS09790	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XB05_RS09795	PWY-6164	3-dehydroquinate biosynthesis I
XB05_RS09805	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
XB05_RS09805	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XB05_RS09875	PWY-5344	L-homocysteine biosynthesis
XB05_RS10015	PWY-2201	folate transformations I
XB05_RS10020	PWY-2722	trehalose degradation IV
XB05_RS10020	PWY-2723	trehalose degradation V
XB05_RS10020	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XB05_RS10020	PWY-5661	GDP-glucose biosynthesis
XB05_RS10020	PWY-621	sucrose degradation III (sucrose invertase)
XB05_RS10020	PWY-7238	sucrose biosynthesis II
XB05_RS10020	PWY-7385	1,3-propanediol biosynthesis (engineered)
XB05_RS10040	PWY-6902	chitin degradation II
XB05_RS10045	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS10065	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS10235	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
XB05_RS10235	PWY-5368	dimorphecolate biosynthesis
XB05_RS10235	PWY-5995	linoleate biosynthesis I (plants)
XB05_RS10235	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
XB05_RS10235	PWY-6803	phosphatidylcholine acyl editing
XB05_RS10235	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
XB05_RS10235	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
XB05_RS10235	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
XB05_RS10235	PWY-7470	phosphatidylcholine biosynthesis VII
XB05_RS10235	PWY-7618	ricinoleate biosynthesis
XB05_RS10250	PWY-1001	cellulose biosynthesis
XB05_RS10250	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XB05_RS10250	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XB05_RS10250	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XB05_RS10250	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XB05_RS10275	PWY-6420	pyrroloquinoline quinone biosynthesis
XB05_RS10300	PWY-2722	trehalose degradation IV
XB05_RS10300	PWY-2723	trehalose degradation V
XB05_RS10300	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XB05_RS10300	PWY-5661	GDP-glucose biosynthesis
XB05_RS10300	PWY-621	sucrose degradation III (sucrose invertase)
XB05_RS10300	PWY-7238	sucrose biosynthesis II
XB05_RS10300	PWY-7385	1,3-propanediol biosynthesis (engineered)
XB05_RS10380	PWY-6703	preQ<sub>0</sub> biosynthesis
XB05_RS10400	PWY-6703	preQ<sub>0</sub> biosynthesis
XB05_RS10610	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XB05_RS10610	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XB05_RS10610	PWY-6269	adenosylcobalamin salvage from cobinamide II
XB05_RS10620	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XB05_RS10620	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XB05_RS10620	PWY-6269	adenosylcobalamin salvage from cobinamide II
XB05_RS10775	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS10775	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
XB05_RS10780	PWY-5392	reductive TCA cycle II
XB05_RS10780	PWY-5537	pyruvate fermentation to acetate V
XB05_RS10780	PWY-5538	pyruvate fermentation to acetate VI
XB05_RS10780	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS10780	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS10780	PWY-6728	methylaspartate cycle
XB05_RS10780	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS10780	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XB05_RS10785	PWY-5392	reductive TCA cycle II
XB05_RS10785	PWY-5537	pyruvate fermentation to acetate V
XB05_RS10785	PWY-5538	pyruvate fermentation to acetate VI
XB05_RS10785	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS10785	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS10785	PWY-6728	methylaspartate cycle
XB05_RS10785	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS10785	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XB05_RS11115	PWY-6891	thiazole biosynthesis II (Bacillus)
XB05_RS11115	PWY-6892	thiazole biosynthesis I (E. coli)
XB05_RS11165	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS11210	PWY-5278	sulfite oxidation III
XB05_RS11210	PWY-5340	sulfate activation for sulfonation
XB05_RS11210	PWY-6683	sulfate reduction III (assimilatory)
XB05_RS11210	PWY-6932	selenate reduction
XB05_RS11215	PWY-5278	sulfite oxidation III
XB05_RS11215	PWY-5340	sulfate activation for sulfonation
XB05_RS11215	PWY-6683	sulfate reduction III (assimilatory)
XB05_RS11215	PWY-6932	selenate reduction
XB05_RS11220	PWY-6683	sulfate reduction III (assimilatory)
XB05_RS11225	PWY-6683	sulfate reduction III (assimilatory)
XB05_RS11265	PWY-5194	siroheme biosynthesis
XB05_RS11265	PWY-5441	S-methyl-L-methionine cycle
XB05_RS11265	PWY-702	L-methionine biosynthesis II
XB05_RS11265	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
XB05_RS11270	PWY-6936	seleno-amino acid biosynthesis
XB05_RS11275	PWY-6825	phosphatidylcholine biosynthesis V
XB05_RS11285	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS11285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XB05_RS11285	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS11285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS11285	PWY-7385	1,3-propanediol biosynthesis (engineered)
XB05_RS11290	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS11290	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS11290	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS11290	PWY-5723	Rubisco shunt
XB05_RS11290	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS11290	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS11290	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS11290	PWY-7003	glycerol degradation to butanol
XB05_RS11290	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS11290	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XB05_RS11300	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS11300	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS11300	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS11300	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS11300	PWY-7003	glycerol degradation to butanol
XB05_RS11330	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS11330	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS11330	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS11330	PWY-7003	glycerol degradation to butanol
XB05_RS11335	PWY-2582	brassinosteroid biosynthesis II
XB05_RS11335	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XB05_RS11335	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XB05_RS11335	PWY-6948	sitosterol degradation to androstenedione
XB05_RS11335	PWY-699	brassinosteroid biosynthesis I
XB05_RS11335	PWY-7299	progesterone biosynthesis
XB05_RS11470	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XB05_RS11470	PWY-5723	Rubisco shunt
XB05_RS11470	PWY-6891	thiazole biosynthesis II (Bacillus)
XB05_RS11470	PWY-6892	thiazole biosynthesis I (E. coli)
XB05_RS11470	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS11470	PWY-7560	methylerythritol phosphate pathway II
XB05_RS11570	PWY-6497	D-galactarate degradation II
XB05_RS11580	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS11580	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS11580	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS11580	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS11580	PWY-5723	Rubisco shunt
XB05_RS11580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS11580	PWY-6499	D-glucarate degradation II
XB05_RS11580	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS11580	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS11580	PWY-7003	glycerol degradation to butanol
XB05_RS11580	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS11580	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS11595	PWY-6486	D-galacturonate degradation II
XB05_RS11595	PWY-6497	D-galactarate degradation II
XB05_RS11595	PWY-6499	D-glucarate degradation II
XB05_RS11595	PWY-6501	D-glucuronate degradation II
XB05_RS11615	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS11635	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
XB05_RS11695	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XB05_RS11695	PWY-5723	Rubisco shunt
XB05_RS11715	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XB05_RS11715	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XB05_RS11715	PWY-6897	thiamin salvage II
XB05_RS11715	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XB05_RS11715	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XB05_RS11715	PWY-7356	thiamin salvage IV (yeast)
XB05_RS11715	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XB05_RS11725	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XB05_RS11825	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS11830	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS11830	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XB05_RS11830	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS11830	PWY-7385	1,3-propanediol biosynthesis (engineered)
XB05_RS11875	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
XB05_RS11895	PWY-4041	&gamma;-glutamyl cycle
XB05_RS11895	PWY-5826	hypoglycin biosynthesis
XB05_RS11900	PWY-5103	L-isoleucine biosynthesis III
XB05_RS11900	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XB05_RS11905	PWY-5101	L-isoleucine biosynthesis II
XB05_RS11905	PWY-5103	L-isoleucine biosynthesis III
XB05_RS11905	PWY-5104	L-isoleucine biosynthesis IV
XB05_RS11905	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
XB05_RS11905	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
XB05_RS11905	PWY-6389	(<i>S</i>)-acetoin biosynthesis
XB05_RS11905	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XB05_RS11920	PWY-6871	3-methylbutanol biosynthesis
XB05_RS11925	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XB05_RS11970	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
XB05_RS12000	PWY-1281	sulfoacetaldehyde degradation I
XB05_RS12000	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XB05_RS12000	PWY-5482	pyruvate fermentation to acetate II
XB05_RS12000	PWY-5485	pyruvate fermentation to acetate IV
XB05_RS12000	PWY-5497	purine nucleobases degradation II (anaerobic)
XB05_RS12000	PWY-6637	sulfolactate degradation II
XB05_RS12000	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XB05_RS12080	PWY-5676	acetyl-CoA fermentation to butanoate II
XB05_RS12080	PWY-5741	ethylmalonyl-CoA pathway
XB05_RS12080	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
XB05_RS12160	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XB05_RS12165	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XB05_RS12170	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XB05_RS12170	PWY-3162	L-tryptophan degradation V (side chain pathway)
XB05_RS12170	PWY-5057	L-valine degradation II
XB05_RS12170	PWY-5076	L-leucine degradation III
XB05_RS12170	PWY-5078	L-isoleucine degradation II
XB05_RS12170	PWY-5079	L-phenylalanine degradation III
XB05_RS12170	PWY-5082	L-methionine degradation III
XB05_RS12170	PWY-5480	pyruvate fermentation to ethanol I
XB05_RS12170	PWY-5486	pyruvate fermentation to ethanol II
XB05_RS12170	PWY-5751	phenylethanol biosynthesis
XB05_RS12170	PWY-6313	serotonin degradation
XB05_RS12170	PWY-6333	acetaldehyde biosynthesis I
XB05_RS12170	PWY-6342	noradrenaline and adrenaline degradation
XB05_RS12170	PWY-6454	vancomycin resistance I
XB05_RS12170	PWY-6587	pyruvate fermentation to ethanol III
XB05_RS12170	PWY-6802	salidroside biosynthesis
XB05_RS12170	PWY-6871	3-methylbutanol biosynthesis
XB05_RS12170	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS12170	PWY-7013	L-1,2-propanediol degradation
XB05_RS12170	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XB05_RS12170	PWY-7118	chitin degradation to ethanol
XB05_RS12170	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XB05_RS12205	PWY-6840	homoglutathione biosynthesis
XB05_RS12205	PWY-7255	ergothioneine biosynthesis I (bacteria)
XB05_RS12250	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
XB05_RS12250	PWY-7494	choline degradation IV
XB05_RS12255	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
XB05_RS12255	PWY-7494	choline degradation IV
XB05_RS12320	PWY-6769	rhamnogalacturonan type I degradation I (fungi)
XB05_RS12320	PWY-6771	rhamnogalacturonan type I degradation II (bacteria)
XB05_RS12325	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XB05_RS12340	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XB05_RS12340	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XB05_RS12340	PWY-6896	thiamin salvage I
XB05_RS12340	PWY-6897	thiamin salvage II
XB05_RS12350	PWY-6167	flavin biosynthesis II (archaea)
XB05_RS12350	PWY-6168	flavin biosynthesis III (fungi)
XB05_RS12355	PWY-6167	flavin biosynthesis II (archaea)
XB05_RS12355	PWY-6168	flavin biosynthesis III (fungi)
XB05_RS12355	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XB05_RS12360	PWY-6167	flavin biosynthesis II (archaea)
XB05_RS12360	PWY-6168	flavin biosynthesis III (fungi)
XB05_RS12360	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS12370	PWY-5525	D-glucuronate degradation I
XB05_RS12385	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS12385	PWY-181	photorespiration
XB05_RS12385	PWY-2161	folate polyglutamylation
XB05_RS12385	PWY-2201	folate transformations I
XB05_RS12385	PWY-3661	glycine betaine degradation I
XB05_RS12385	PWY-3661-1	glycine betaine degradation II (mammalian)
XB05_RS12385	PWY-3841	folate transformations II
XB05_RS12385	PWY-5497	purine nucleobases degradation II (anaerobic)
XB05_RS12425	PWY-6788	cellulose degradation II (fungi)
XB05_RS12435	PWY-1001	cellulose biosynthesis
XB05_RS12450	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS12580	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XB05_RS12580	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XB05_RS12580	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XB05_RS12645	PWY-5669	phosphatidylethanolamine biosynthesis I
XB05_RS12715	PWY-6749	CMP-legionaminate biosynthesis I
XB05_RS12720	PWY-5659	GDP-mannose biosynthesis
XB05_RS12720	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
XB05_RS12735	PWY-3221	dTDP-L-rhamnose biosynthesis II
XB05_RS12735	PWY-6808	dTDP-D-forosamine biosynthesis
XB05_RS12735	PWY-6942	dTDP-D-desosamine biosynthesis
XB05_RS12735	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
XB05_RS12735	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
XB05_RS12735	PWY-6974	dTDP-L-olivose biosynthesis
XB05_RS12735	PWY-6976	dTDP-L-mycarose biosynthesis
XB05_RS12735	PWY-7104	dTDP-L-megosamine biosynthesis
XB05_RS12735	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
XB05_RS12735	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
XB05_RS12735	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
XB05_RS12735	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
XB05_RS12735	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
XB05_RS12735	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
XB05_RS12735	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
XB05_RS12735	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
XB05_RS12735	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
XB05_RS12735	PWY-7688	XB05_RS12735
XB05_RS12740	PWY-3221	dTDP-L-rhamnose biosynthesis II
XB05_RS12740	PWY-6808	dTDP-D-forosamine biosynthesis
XB05_RS12740	PWY-6942	dTDP-D-desosamine biosynthesis
XB05_RS12740	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
XB05_RS12740	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
XB05_RS12740	PWY-6974	dTDP-L-olivose biosynthesis
XB05_RS12740	PWY-6976	dTDP-L-mycarose biosynthesis
XB05_RS12740	PWY-7104	dTDP-L-megosamine biosynthesis
XB05_RS12740	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
XB05_RS12740	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
XB05_RS12740	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
XB05_RS12740	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
XB05_RS12740	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
XB05_RS12740	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
XB05_RS12740	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
XB05_RS12740	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
XB05_RS12740	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
XB05_RS12740	PWY-7688	XB05_RS12740
XB05_RS12905	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XB05_RS12930	PWY-181	photorespiration
XB05_RS12940	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XB05_RS12940	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XB05_RS12940	PWY-5989	stearate biosynthesis II (bacteria and plants)
XB05_RS12940	PWY-5994	palmitate biosynthesis I (animals and fungi)
XB05_RS12940	PWY-6113	superpathway of mycolate biosynthesis
XB05_RS12940	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XB05_RS12940	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS12940	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS12940	PWY-7663	gondoate biosynthesis (anaerobic)
XB05_RS12940	PWY-7664	oleate biosynthesis IV (anaerobic)
XB05_RS12940	PWYG-321	mycolate biosynthesis
XB05_RS12980	PWY-5386	methylglyoxal degradation I
XB05_RS12995	PWY-6749	CMP-legionaminate biosynthesis I
XB05_RS13035	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
XB05_RS13035	PWY-5667	CDP-diacylglycerol biosynthesis I
XB05_RS13035	PWY-6453	stigma estolide biosynthesis
XB05_RS13035	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
XB05_RS13035	PWY-7587	oleate biosynthesis III (cyanobacteria)
XB05_RS13045	PWY-3461	L-tyrosine biosynthesis II
XB05_RS13045	PWY-3462	L-phenylalanine biosynthesis II
XB05_RS13045	PWY-6120	L-tyrosine biosynthesis III
XB05_RS13045	PWY-6627	salinosporamide A biosynthesis
XB05_RS13045	PWY-7626	bacilysin biosynthesis
XB05_RS13055	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS13065	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS13100	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
XB05_RS13100	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
XB05_RS13230	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XB05_RS13395	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
XB05_RS13960	PWY-6168	flavin biosynthesis III (fungi)
XB05_RS13960	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XB05_RS13995	PWY-6825	phosphatidylcholine biosynthesis V
XB05_RS14150	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS14165	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS14165	PWY-6549	L-glutamine biosynthesis III
XB05_RS14165	PWY-6728	methylaspartate cycle
XB05_RS14165	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS14165	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS14165	PWY-7254	TCA cycle VII (acetate-producers)
XB05_RS14165	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XB05_RS14180	PWY-6700	queuosine biosynthesis
XB05_RS14240	PWY-6454	vancomycin resistance I
XB05_RS14240	PWY-6455	vancomycin resistance II
XB05_RS14270	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS14270	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS14270	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS14270	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS14270	PWY-5723	Rubisco shunt
XB05_RS14270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS14270	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS14270	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS14270	PWY-7003	glycerol degradation to butanol
XB05_RS14270	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS14270	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS14310	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XB05_RS14310	PWY-6148	tetrahydromethanopterin biosynthesis
XB05_RS14310	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XB05_RS14310	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XB05_RS14315	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
XB05_RS14315	PWY-5368	dimorphecolate biosynthesis
XB05_RS14315	PWY-5995	linoleate biosynthesis I (plants)
XB05_RS14315	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
XB05_RS14315	PWY-6803	phosphatidylcholine acyl editing
XB05_RS14315	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
XB05_RS14315	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
XB05_RS14315	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
XB05_RS14315	PWY-7470	phosphatidylcholine biosynthesis VII
XB05_RS14315	PWY-7618	ricinoleate biosynthesis
XB05_RS14395	PWY-3781	aerobic respiration I (cytochrome c)
XB05_RS14395	PWY-4521	arsenite oxidation I (respiratory)
XB05_RS14395	PWY-6692	Fe(II) oxidation
XB05_RS14395	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
XB05_RS14410	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
XB05_RS14410	PWY-6853	ethylene biosynthesis II (microbes)
XB05_RS14410	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XB05_RS14470	PWY-5686	UMP biosynthesis
XB05_RS14510	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XB05_RS14510	PWY-622	starch biosynthesis
XB05_RS14520	PWY-6749	CMP-legionaminate biosynthesis I
XB05_RS14525	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XB05_RS14525	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS14525	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS14525	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
XB05_RS14565	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XB05_RS14565	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XB05_RS14565	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XB05_RS14565	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XB05_RS14575	PWY-40	putrescine biosynthesis I
XB05_RS14575	PWY-43	putrescine biosynthesis II
XB05_RS14575	PWY-6305	putrescine biosynthesis IV
XB05_RS14575	PWY-6834	spermidine biosynthesis III
XB05_RS14600	PWY-6902	chitin degradation II
XB05_RS14600	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
XB05_RS14640	PWY-6823	molybdenum cofactor biosynthesis
XB05_RS14640	PWY-6891	thiazole biosynthesis II (Bacillus)
XB05_RS14640	PWY-6892	thiazole biosynthesis I (E. coli)
XB05_RS14640	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
XB05_RS14945	PWY-31	canavanine degradation
XB05_RS14945	PWY-4984	urea cycle
XB05_RS14945	PWY-6305	putrescine biosynthesis IV
XB05_RS14945	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
XB05_RS14970	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XB05_RS14970	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS14970	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS14970	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
XB05_RS14970	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XB05_RS14970	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XB05_RS14985	PWY-3961	phosphopantothenate biosynthesis II
XB05_RS15080	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XB05_RS15135	PWY-2201	folate transformations I
XB05_RS15135	PWY-5497	purine nucleobases degradation II (anaerobic)
XB05_RS15230	PWY-5169	cyanurate degradation
XB05_RS15230	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XB05_RS15235	PWY-4041	&gamma;-glutamyl cycle
XB05_RS15235	PWY-5826	hypoglycin biosynthesis
XB05_RS15260	PWY-6832	2-aminoethylphosphonate degradation II
XB05_RS15275	PWY-5691	urate degradation to allantoin I
XB05_RS15275	PWY-7394	urate degradation to allantoin II
XB05_RS15285	PWY-5691	urate degradation to allantoin I
XB05_RS15285	PWY-7394	urate degradation to allantoin II
XB05_RS15305	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XB05_RS15305	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XB05_RS15415	PWY-6654	phosphopantothenate biosynthesis III
XB05_RS15445	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XB05_RS15445	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS15445	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XB05_RS15445	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XB05_RS15445	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS15445	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS15445	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS15445	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XB05_RS15450	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
XB05_RS15450	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS15450	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XB05_RS15450	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XB05_RS15450	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS15450	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS15450	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS15450	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
XB05_RS15460	PWY-5392	reductive TCA cycle II
XB05_RS15460	PWY-5537	pyruvate fermentation to acetate V
XB05_RS15460	PWY-5538	pyruvate fermentation to acetate VI
XB05_RS15460	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS15460	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS15460	PWY-6728	methylaspartate cycle
XB05_RS15460	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS15460	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
XB05_RS15475	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
XB05_RS15555	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XB05_RS15555	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XB05_RS15555	PWY-5989	stearate biosynthesis II (bacteria and plants)
XB05_RS15555	PWY-5994	palmitate biosynthesis I (animals and fungi)
XB05_RS15555	PWY-6113	superpathway of mycolate biosynthesis
XB05_RS15555	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XB05_RS15555	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS15555	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS15555	PWY-7663	gondoate biosynthesis (anaerobic)
XB05_RS15555	PWY-7664	oleate biosynthesis IV (anaerobic)
XB05_RS15555	PWYG-321	mycolate biosynthesis
XB05_RS15560	PWY-5667	CDP-diacylglycerol biosynthesis I
XB05_RS15560	PWY-5981	CDP-diacylglycerol biosynthesis III
XB05_RS15560	PWY-6453	stigma estolide biosynthesis
XB05_RS15560	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
XB05_RS15560	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
XB05_RS15560	PWY-7587	oleate biosynthesis III (cyanobacteria)
XB05_RS15560	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
XB05_RS15605	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
XB05_RS15605	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
XB05_RS15690	PWY-7701	XB05_RS15690
XB05_RS15755	PWY-6012	acyl carrier protein metabolism I
XB05_RS15755	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
XB05_RS15765	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XB05_RS15810	PWY-6672	<i>cis</i>-genanyl-CoA degradation
XB05_RS15810	PWY-7118	chitin degradation to ethanol
XB05_RS15865	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS15865	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS15865	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS15865	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS15865	PWY-5723	Rubisco shunt
XB05_RS15865	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS15865	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS15865	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS15865	PWY-7003	glycerol degradation to butanol
XB05_RS15865	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS15865	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS15905	PWY-5530	sorbitol biosynthesis II
XB05_RS15920	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XB05_RS15920	PWY-6416	quinate degradation II
XB05_RS15920	PWY-6707	gallate biosynthesis
XB05_RS16030	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS16035	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS16035	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS16035	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS16035	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS16035	PWY-5723	Rubisco shunt
XB05_RS16035	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS16035	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS16035	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS16035	PWY-7003	glycerol degradation to butanol
XB05_RS16035	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS16035	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS16050	PWY-6531	mannitol cycle
XB05_RS16100	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XB05_RS16105	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS16110	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
XB05_RS16110	PWY-7248	pectin degradation III
XB05_RS16115	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
XB05_RS16165	PWY-5667	CDP-diacylglycerol biosynthesis I
XB05_RS16165	PWY-6453	stigma estolide biosynthesis
XB05_RS16165	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
XB05_RS16165	PWY-7587	oleate biosynthesis III (cyanobacteria)
XB05_RS16200	PWY-5686	UMP biosynthesis
XB05_RS16275	PWY-7199	pyrimidine deoxyribonucleosides salvage
XB05_RS16380	PWY-5663	tetrahydrobiopterin biosynthesis I
XB05_RS16380	PWY-5664	tetrahydrobiopterin biosynthesis II
XB05_RS16380	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XB05_RS16380	PWY-6703	preQ<sub>0</sub> biosynthesis
XB05_RS16380	PWY-6983	tetrahydrobiopterin biosynthesis III
XB05_RS16380	PWY-7442	drosopterin and aurodrosopterin biosynthesis
XB05_RS16660	PWY-7533	gliotoxin biosynthesis
XB05_RS16695	PWY-6348	phosphate acquisition
XB05_RS17195	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS17200	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS17200	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
XB05_RS17200	PWY-6638	sulfolactate degradation III
XB05_RS17200	PWY-6642	(<i>R</i>)-cysteate degradation
XB05_RS17200	PWY-6643	coenzyme M biosynthesis II
XB05_RS17200	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XB05_RS17200	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XB05_RS17200	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XB05_RS17255	PWY-6825	phosphatidylcholine biosynthesis V
XB05_RS17285	PWY-5971	palmitate biosynthesis II (bacteria and plants)
XB05_RS17285	PWY-5973	<i>cis</i>-vaccenate biosynthesis
XB05_RS17285	PWY-5989	stearate biosynthesis II (bacteria and plants)
XB05_RS17285	PWY-6113	superpathway of mycolate biosynthesis
XB05_RS17285	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
XB05_RS17285	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS17285	PWY-7663	gondoate biosynthesis (anaerobic)
XB05_RS17285	PWY-7664	oleate biosynthesis IV (anaerobic)
XB05_RS17285	PWYG-321	mycolate biosynthesis
XB05_RS17310	PWY-1081	homogalacturonan degradation
XB05_RS17310	PWY-7246	pectin degradation II
XB05_RS17310	PWY-7248	pectin degradation III
XB05_RS17435	PWY-2622	trehalose biosynthesis IV
XB05_RS17440	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XB05_RS17440	PWY-622	starch biosynthesis
XB05_RS17515	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XB05_RS17520	PWY-5515	L-arabinose degradation II
XB05_RS17520	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
XB05_RS17520	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
XB05_RS17555	PWY-6134	L-tyrosine biosynthesis IV
XB05_RS17555	PWY-7158	L-phenylalanine degradation V
XB05_RS17610	PWY-7255	ergothioneine biosynthesis I (bacteria)
XB05_RS17695	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
XB05_RS17700	PWY-381	nitrate reduction II (assimilatory)
XB05_RS17700	PWY-5675	nitrate reduction V (assimilatory)
XB05_RS17700	PWY-6549	L-glutamine biosynthesis III
XB05_RS17700	PWY-6963	ammonia assimilation cycle I
XB05_RS17700	PWY-6964	ammonia assimilation cycle II
XB05_RS17725	PWY-6854	ethylene biosynthesis III (microbes)
XB05_RS17730	PWY-6854	ethylene biosynthesis III (microbes)
XB05_RS17765	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XB05_RS17765	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XB05_RS17795	PWY-5667	CDP-diacylglycerol biosynthesis I
XB05_RS17795	PWY-5981	CDP-diacylglycerol biosynthesis III
XB05_RS17835	PWY-6004	glycine betaine biosynthesis V (from glycine)
XB05_RS17850	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS17985	PWY-6728	methylaspartate cycle
XB05_RS17985	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS17985	PWY-7118	chitin degradation to ethanol
XB05_RS17985	PWY-7294	xylose degradation IV
XB05_RS17985	PWY-7295	L-arabinose degradation IV
XB05_RS17990	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS18025	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS18025	PWY-5743	3-hydroxypropanoate cycle
XB05_RS18025	PWY-5744	glyoxylate assimilation
XB05_RS18025	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XB05_RS18025	PWY-6679	jadomycin biosynthesis
XB05_RS18025	PWY-6722	candicidin biosynthesis
XB05_RS18025	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS18190	PWY-2201	folate transformations I
XB05_RS18190	PWY-3841	folate transformations II
XB05_RS18205	PWY-7723	XB05_RS18205
XB05_RS18215	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XB05_RS18215	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
XB05_RS18215	PWY-6936	seleno-amino acid biosynthesis
XB05_RS18215	PWY-702	L-methionine biosynthesis II
XB05_RS18245	PWY-6825	phosphatidylcholine biosynthesis V
XB05_RS18345	PWY-5101	L-isoleucine biosynthesis II
XB05_RS18345	PWY-5103	L-isoleucine biosynthesis III
XB05_RS18345	PWY-5104	L-isoleucine biosynthesis IV
XB05_RS18345	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XB05_RS18415	PWY-4261	glycerol degradation I
XB05_RS18425	PWY-4261	glycerol degradation I
XB05_RS18425	PWY-6118	glycerol-3-phosphate shuttle
XB05_RS18425	PWY-6952	glycerophosphodiester degradation
XB05_RS18460	PWY-1361	benzoyl-CoA degradation I (aerobic)
XB05_RS18460	PWY-2361	3-oxoadipate degradation
XB05_RS18460	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XB05_RS18475	PWY-6123	inosine-5'-phosphate biosynthesis I
XB05_RS18475	PWY-6124	inosine-5'-phosphate biosynthesis II
XB05_RS18475	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
XB05_RS18475	PWY-7234	inosine-5'-phosphate biosynthesis III
XB05_RS18480	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XB05_RS18545	PWY-2201	folate transformations I
XB05_RS18545	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS18555	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS18560	PWY-6519	8-amino-7-oxononanoate biosynthesis I
XB05_RS18560	PWY-6578	8-amino-7-oxononanoate biosynthesis III
XB05_RS18560	PWY-7147	8-amino-7-oxononanoate biosynthesis II
XB05_RS18565	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
XB05_RS18615	PWY-622	starch biosynthesis
XB05_RS18620	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
XB05_RS18620	PWY-622	starch biosynthesis
XB05_RS18625	PWY-2661	trehalose biosynthesis V
XB05_RS18625	PWY-6902	chitin degradation II
XB05_RS18630	PWY-5941	glycogen degradation II (eukaryotic)
XB05_RS18630	PWY-6724	starch degradation II
XB05_RS18630	PWY-6737	starch degradation V
XB05_RS18630	PWY-7238	sucrose biosynthesis II
XB05_RS18635	PWY-2661	trehalose biosynthesis V
XB05_RS18845	PWY-6123	inosine-5'-phosphate biosynthesis I
XB05_RS18845	PWY-6124	inosine-5'-phosphate biosynthesis II
XB05_RS18845	PWY-7234	inosine-5'-phosphate biosynthesis III
XB05_RS18860	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XB05_RS18860	PWY-5723	Rubisco shunt
XB05_RS18875	PWY-5958	acridone alkaloid biosynthesis
XB05_RS18875	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XB05_RS18875	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XB05_RS19215	PWY-1042	glycolysis IV (plant cytosol)
XB05_RS19215	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS19215	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
XB05_RS19215	PWY-5484	glycolysis II (from fructose 6-phosphate)
XB05_RS19215	PWY-5723	Rubisco shunt
XB05_RS19215	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS19215	PWY-6886	1-butanol autotrophic biosynthesis
XB05_RS19215	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS19215	PWY-7003	glycerol degradation to butanol
XB05_RS19215	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS19215	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
XB05_RS19220	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
XB05_RS19230	PWY-6107	chlorosalicylate degradation
XB05_RS19230	PWY-6183	salicylate degradation I
XB05_RS19230	PWY-6184	methylsalicylate degradation
XB05_RS19445	PWY-5958	acridone alkaloid biosynthesis
XB05_RS19445	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
XB05_RS19445	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
XB05_RS19475	PWY-6834	spermidine biosynthesis III
XB05_RS19555	PWY-6857	retinol biosynthesis
XB05_RS19560	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS19600	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XB05_RS19600	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XB05_RS19600	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XB05_RS19605	PWY-6123	inosine-5'-phosphate biosynthesis I
XB05_RS19605	PWY-6124	inosine-5'-phosphate biosynthesis II
XB05_RS19605	PWY-7234	inosine-5'-phosphate biosynthesis III
XB05_RS19665	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
XB05_RS19665	PWY-6416	quinate degradation II
XB05_RS19665	PWY-6707	gallate biosynthesis
XB05_RS19700	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
XB05_RS19700	PWY-6164	3-dehydroquinate biosynthesis I
XB05_RS19700	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
XB05_RS19795	PWY-5794	malonate degradation I (biotin-independent)
XB05_RS19795	PWY-6060	malonate degradation II (biotin-dependent)
XB05_RS19805	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS19805	PWY-5743	3-hydroxypropanoate cycle
XB05_RS19805	PWY-5744	glyoxylate assimilation
XB05_RS19805	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XB05_RS19805	PWY-6060	malonate degradation II (biotin-dependent)
XB05_RS19805	PWY-6679	jadomycin biosynthesis
XB05_RS19805	PWY-6722	candicidin biosynthesis
XB05_RS19805	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS19810	PWY-4381	fatty acid biosynthesis initiation I
XB05_RS19810	PWY-5743	3-hydroxypropanoate cycle
XB05_RS19810	PWY-5744	glyoxylate assimilation
XB05_RS19810	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
XB05_RS19810	PWY-6060	malonate degradation II (biotin-dependent)
XB05_RS19810	PWY-6679	jadomycin biosynthesis
XB05_RS19810	PWY-6722	candicidin biosynthesis
XB05_RS19810	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
XB05_RS19815	PWY-5796	malonate decarboxylase activation
XB05_RS19820	PWY-5796	malonate decarboxylase activation
XB05_RS19875	PWY-6891	thiazole biosynthesis II (Bacillus)
XB05_RS19875	PWY-6892	thiazole biosynthesis I (E. coli)
XB05_RS19875	PWY-7560	methylerythritol phosphate pathway II
XB05_RS20040	PWY-4061	glutathione-mediated detoxification I
XB05_RS20040	PWY-6842	glutathione-mediated detoxification II
XB05_RS20040	PWY-7112	4-hydroxy-2-nonenal detoxification
XB05_RS20040	PWY-7533	gliotoxin biosynthesis
XB05_RS20200	PWY-6906	chitin derivatives degradation
XB05_RS20200	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
XB05_RS20200	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
XB05_RS20235	PWY-6807	xyloglucan degradation II (exoglucanase)
XB05_RS20350	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
XB05_RS20350	PWY-6148	tetrahydromethanopterin biosynthesis
XB05_RS20350	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
XB05_RS20350	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
XB05_RS20410	PWY-5381	pyridine nucleotide cycling (plants)
XB05_RS20440	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XB05_RS20440	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XB05_RS20445	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
XB05_RS20445	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
XB05_RS20460	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XB05_RS20460	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XB05_RS20520	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
XB05_RS20520	PWY-3162	L-tryptophan degradation V (side chain pathway)
XB05_RS20520	PWY-5057	L-valine degradation II
XB05_RS20520	PWY-5076	L-leucine degradation III
XB05_RS20520	PWY-5078	L-isoleucine degradation II
XB05_RS20520	PWY-5079	L-phenylalanine degradation III
XB05_RS20520	PWY-5082	L-methionine degradation III
XB05_RS20520	PWY-5480	pyruvate fermentation to ethanol I
XB05_RS20520	PWY-5486	pyruvate fermentation to ethanol II
XB05_RS20520	PWY-5751	phenylethanol biosynthesis
XB05_RS20520	PWY-6313	serotonin degradation
XB05_RS20520	PWY-6333	acetaldehyde biosynthesis I
XB05_RS20520	PWY-6342	noradrenaline and adrenaline degradation
XB05_RS20520	PWY-6454	vancomycin resistance I
XB05_RS20520	PWY-6587	pyruvate fermentation to ethanol III
XB05_RS20520	PWY-6802	salidroside biosynthesis
XB05_RS20520	PWY-6871	3-methylbutanol biosynthesis
XB05_RS20520	PWY-6901	superpathway of glucose and xylose degradation
XB05_RS20520	PWY-7013	L-1,2-propanediol degradation
XB05_RS20520	PWY-7111	pyruvate fermentation to isobutanol (engineered)
XB05_RS20520	PWY-7118	chitin degradation to ethanol
XB05_RS20520	PWY-7396	butanol and isobutanol biosynthesis (engineered)
XB05_RS20565	PWY-5839	menaquinol-7 biosynthesis
XB05_RS20565	PWY-5844	menaquinol-9 biosynthesis
XB05_RS20565	PWY-5849	menaquinol-6 biosynthesis
XB05_RS20565	PWY-5890	menaquinol-10 biosynthesis
XB05_RS20565	PWY-5891	menaquinol-11 biosynthesis
XB05_RS20565	PWY-5892	menaquinol-12 biosynthesis
XB05_RS20565	PWY-5895	menaquinol-13 biosynthesis
XB05_RS20610	PWY-2941	L-lysine biosynthesis II
XB05_RS20610	PWY-5097	L-lysine biosynthesis VI
XB05_RS20670	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XB05_RS20670	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
XB05_RS20790	PWY-2201	folate transformations I
XB05_RS20805	PWY-2201	folate transformations I
XB05_RS20825	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XB05_RS20825	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XB05_RS20830	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XB05_RS20830	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XB05_RS20830	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XB05_RS20840	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
XB05_RS20840	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
XB05_RS20840	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
XB05_RS20840	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
XB05_RS20845	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XB05_RS20845	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XB05_RS20850	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XB05_RS20850	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
XB05_RS20870	PWY-2201	folate transformations I
XB05_RS20870	PWY-5497	purine nucleobases degradation II (anaerobic)
XB05_RS20895	PWY-6502	oxidized GTP and dGTP detoxification
XB05_RS20895	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
XB05_RS20895	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
XB05_RS20895	PWY-6897	thiamin salvage II
XB05_RS20895	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
XB05_RS20895	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
XB05_RS20895	PWY-7356	thiamin salvage IV (yeast)
XB05_RS20895	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
XB05_RS20910	PWY-2201	folate transformations I
XB05_RS20910	PWY-3841	folate transformations II
XB05_RS20950	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XB05_RS20960	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS20960	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
XB05_RS20960	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS20960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
XB05_RS20960	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
XB05_RS20960	PWY-6549	L-glutamine biosynthesis III
XB05_RS20960	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XB05_RS20960	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
XB05_RS20960	PWY-7124	ethylene biosynthesis V (engineered)
XB05_RS20990	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
XB05_RS20990	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
XB05_RS21120	PWY-7039	phosphatidate metabolism, as a signaling molecule
XB05_RS21145	PWY-3841	folate transformations II
XB05_RS21145	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
XB05_RS21145	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
XB05_RS21145	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
XB05_RS21145	PWY-7199	pyrimidine deoxyribonucleosides salvage
XB05_RS21145	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
XB05_RS21155	PWY-3841	folate transformations II
XB05_RS21155	PWY-6614	tetrahydrofolate biosynthesis
XB05_RS21180	PWY-7294	xylose degradation IV
XB05_RS21180	PWY-7295	L-arabinose degradation IV
XB05_RS21200	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
XB05_RS21200	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
XB05_RS21200	PWY-6268	adenosylcobalamin salvage from cobalamin
XB05_RS21200	PWY-6269	adenosylcobalamin salvage from cobinamide II
XB05_RS21290	PWY-5530	sorbitol biosynthesis II
XB05_RS21320	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XB05_RS21350	PWY-2582	brassinosteroid biosynthesis II
XB05_RS21350	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
XB05_RS21350	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
XB05_RS21350	PWY-6948	sitosterol degradation to androstenedione
XB05_RS21350	PWY-699	brassinosteroid biosynthesis I
XB05_RS21350	PWY-7299	progesterone biosynthesis
XB05_RS21365	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
XB05_RS21365	PWY-5723	Rubisco shunt
XB05_RS21485	PWY-5057	L-valine degradation II
XB05_RS21485	PWY-5076	L-leucine degradation III
XB05_RS21485	PWY-5078	L-isoleucine degradation II
XB05_RS21485	PWY-5101	L-isoleucine biosynthesis II
XB05_RS21485	PWY-5103	L-isoleucine biosynthesis III
XB05_RS21485	PWY-5104	L-isoleucine biosynthesis IV
XB05_RS21485	PWY-5108	L-isoleucine biosynthesis V
XB05_RS21520	PWY-7731	XB05_RS21520
XB05_RS21565	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
XB05_RS21580	PWY-7560	methylerythritol phosphate pathway II
XB05_RS21600	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
XB05_RS21835	PWY-6164	3-dehydroquinate biosynthesis I
XB05_RS21845	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
XB05_RS21865	PWY-1622	formaldehyde assimilation I (serine pathway)
XB05_RS21865	PWY-5392	reductive TCA cycle II
XB05_RS21865	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
XB05_RS21865	PWY-5690	TCA cycle II (plants and fungi)
XB05_RS21865	PWY-5913	TCA cycle VI (obligate autotrophs)
XB05_RS21865	PWY-6728	methylaspartate cycle
XB05_RS21865	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
XB05_RS21865	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
XB05_RS21865	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
XB05_RS21945	PWY-5515	L-arabinose degradation II
XB05_RS21945	PWY-5525	D-glucuronate degradation I
XB05_RS21945	PWY-7378	aminopropanol phosphate biosynthesis II
XB05_RS21970	PWY-2161	folate polyglutamylation
XB05_RS21985	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
XB05_RS21985	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
XB05_RS21985	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
XB05_RS21985	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
XB05_RS22290	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
XB05_RS22290	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)