locus-tag class description JM952_RS00005 PF00308 Bacterial dnaA protein JM952_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JM952_RS00005 PF11638 DnaA N-terminal domain JM952_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JM952_RS00010 PF02767 DNA polymerase III beta subunit, central domain JM952_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JM952_RS00015 PF02463 RecF/RecN/SMC N terminal domain JM952_RS00020 PF00204 DNA gyrase B JM952_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus JM952_RS00020 PF18053 DNA gyrase B subunit insert domain JM952_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS00020 PF01751 Toprim domain JM952_RS00030 PF01435 Peptidase family M48 JM952_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal JM952_RS00045 PF01618 MotA/TolQ/ExbB proton channel family JM952_RS00050 PF02472 Biopolymer transport protein ExbD/TolR JM952_RS00055 PF02472 Biopolymer transport protein ExbD/TolR JM952_RS00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JM952_RS00070 PF13091 PLD-like domain JM952_RS00070 PF13396 Phospholipase_D-nuclease N-terminal JM952_RS00075 PF04055 Radical SAM superfamily JM952_RS00085 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JM952_RS00100 PF01842 ACT domain JM952_RS00100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JM952_RS00100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JM952_RS00105 PF03572 Peptidase family S41 JM952_RS00105 PF13180 PDZ domain JM952_RS00110 PF01551 Peptidase family M23 JM952_RS00120 PF04389 Peptidase family M28 JM952_RS00135 PF00150 Cellulase (glycosyl hydrolase family 5) JM952_RS00140 PF00150 Cellulase (glycosyl hydrolase family 5) JM952_RS00145 PF00150 Cellulase (glycosyl hydrolase family 5) JM952_RS00150 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS00150 PF00107 Zinc-binding dehydrogenase JM952_RS00165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JM952_RS00165 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS00170 PF01645 Conserved region in glutamate synthase JM952_RS00170 PF00310 Glutamine amidotransferases class-II JM952_RS00170 PF04898 Glutamate synthase central domain JM952_RS00170 PF01493 GXGXG motif JM952_RS00185 PF00398 Ribosomal RNA adenine dimethylase JM952_RS00195 PF05726 Pirin C-terminal cupin domain JM952_RS00195 PF02678 Pirin JM952_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS00205 PF03466 LysR substrate binding domain JM952_RS00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS00220 PF03466 LysR substrate binding domain JM952_RS00280 PF00270 DEAD/DEAH box helicase JM952_RS00280 PF09369 Domain of unknown function (DUF1998) JM952_RS00280 PF00271 Helicase conserved C-terminal domain JM952_RS00285 PF02661 Fic/DOC family JM952_RS00285 PF13784 Fic/DOC family N-terminal JM952_RS00290 PF03006 Haemolysin-III related JM952_RS00360 PF01872 RibD C-terminal domain JM952_RS00365 PF05532 CsbD-like JM952_RS00370 PF00072 Response regulator receiver domain JM952_RS00370 PF00196 Bacterial regulatory proteins, luxR family JM952_RS00395 PF01447 Thermolysin metallopeptidase, catalytic domain JM952_RS00395 PF16485 Protealysin propeptide JM952_RS00395 PF02868 Thermolysin metallopeptidase, alpha-helical domain JM952_RS00405 PF00293 NUDIX domain JM952_RS00405 PF13344 Haloacid dehalogenase-like hydrolase JM952_RS00410 PF01594 AI-2E family transporter JM952_RS00415 PF07859 alpha/beta hydrolase fold JM952_RS00425 PF00085 Thioredoxin JM952_RS00430 PF08946 Osmosensory transporter coiled coil JM952_RS00430 PF00083 Sugar (and other) transporter JM952_RS00470 PF07726 ATPase family associated with various cellular activities (AAA) JM952_RS00470 PF17863 AAA lid domain JM952_RS00500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JM952_RS00505 PF00155 Aminotransferase class I and II JM952_RS00510 PF07715 TonB-dependent Receptor Plug Domain JM952_RS00510 PF00593 TonB dependent receptor JM952_RS00525 PF00171 Aldehyde dehydrogenase family JM952_RS00545 PF02735 Ku70/Ku80 beta-barrel domain JM952_RS00550 PF13298 DNA polymerase Ligase (LigD) JM952_RS00550 PF04679 ATP dependent DNA ligase C terminal region JM952_RS00550 PF01068 ATP dependent DNA ligase domain JM952_RS00555 PF01070 FMN-dependent dehydrogenase JM952_RS00580 PF00486 Transcriptional regulatory protein, C terminal JM952_RS00580 PF18500 CadC C-terminal domain 1 JM952_RS00585 PF07055 Enoyl reductase FAD binding domain JM952_RS00585 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JM952_RS00585 PF12241 Trans-2-enoyl-CoA reductase catalytic region JM952_RS00600 PF00294 pfkB family carbohydrate kinase JM952_RS00615 PF01095 Pectinesterase JM952_RS00685 PF00128 Alpha amylase, catalytic domain JM952_RS00685 PF11896 Domain of unknown function (DUF3416) JM952_RS00690 PF00128 Alpha amylase, catalytic domain JM952_RS00690 PF16657 Maltogenic Amylase, C-terminal domain JM952_RS00695 PF02806 Alpha amylase, C-terminal all-beta domain JM952_RS00695 PF00128 Alpha amylase, catalytic domain JM952_RS00695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM952_RS00725 PF00248 Aldo/keto reductase family JM952_RS00730 PF13472 GDSL-like Lipase/Acylhydrolase family JM952_RS00735 PF00135 Carboxylesterase family JM952_RS00740 PF13472 GDSL-like Lipase/Acylhydrolase family JM952_RS00740 PF07859 alpha/beta hydrolase fold JM952_RS00750 PF03480 Bacterial extracellular solute-binding protein, family 7 JM952_RS00760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JM952_RS00765 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JM952_RS00765 PF04616 Glycosyl hydrolases family 43 JM952_RS00770 PF00356 Bacterial regulatory proteins, lacI family JM952_RS00775 PF04962 KduI/IolB family JM952_RS00790 PF00657 GDSL-like Lipase/Acylhydrolase JM952_RS00800 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JM952_RS00805 PF01037 Lrp/AsnC ligand binding domain JM952_RS00815 PF07715 TonB-dependent Receptor Plug Domain JM952_RS00815 PF00593 TonB dependent receptor JM952_RS00815 PF07660 Secretin and TonB N terminus short domain JM952_RS00820 PF01734 Patatin-like phospholipase JM952_RS00830 PF00005 ABC transporter JM952_RS00845 PF00005 ABC transporter JM952_RS00845 PF00571 CBS domain JM952_RS00850 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS00860 PF12867 DinB superfamily JM952_RS00860 PF03781 Sulfatase-modifying factor enzyme 1 JM952_RS00865 PF10017 Histidine-specific methyltransferase, SAM-dependent JM952_RS00895 PF10609 NUBPL iron-transfer P-loop NTPase JM952_RS00895 PF01883 Iron-sulfur cluster assembly protein JM952_RS00900 PF00300 Histidine phosphatase superfamily (branch 1) JM952_RS00905 PF04264 YceI-like domain JM952_RS00910 PF13091 PLD-like domain JM952_RS00915 PF03061 Thioesterase superfamily JM952_RS00935 PF01161 Phosphatidylethanolamine-binding protein JM952_RS00945 PF02673 Bacitracin resistance protein BacA JM952_RS00950 PF03951 Glutamine synthetase, beta-Grasp domain JM952_RS00950 PF00120 Glutamine synthetase, catalytic domain JM952_RS00955 PF00543 Nitrogen regulatory protein P-II JM952_RS00960 PF00909 Ammonium Transporter Family JM952_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS00965 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS00965 PF00989 PAS fold JM952_RS00970 PF00158 Sigma-54 interaction domain JM952_RS00970 PF00072 Response regulator receiver domain JM952_RS00970 PF02954 Bacterial regulatory protein, Fis family JM952_RS00980 PF00080 Copper/zinc superoxide dismutase (SODC) JM952_RS00985 PF00080 Copper/zinc superoxide dismutase (SODC) JM952_RS01000 PF00108 Thiolase, N-terminal domain JM952_RS01000 PF02803 Thiolase, C-terminal domain JM952_RS01040 PF00581 Rhodanese-like domain JM952_RS01045 PF02556 Preprotein translocase subunit SecB JM952_RS01050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JM952_RS01050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JM952_RS01060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM952_RS01060 PF00205 Thiamine pyrophosphate enzyme, central domain JM952_RS01060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM952_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS01065 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS01070 PF02954 Bacterial regulatory protein, Fis family JM952_RS01070 PF00072 Response regulator receiver domain JM952_RS01070 PF00158 Sigma-54 interaction domain JM952_RS01085 PF07690 Major Facilitator Superfamily JM952_RS01090 PF00588 SpoU rRNA Methylase family JM952_RS01105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JM952_RS01105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JM952_RS01110 PF13784 Fic/DOC family N-terminal JM952_RS01110 PF02661 Fic/DOC family JM952_RS01115 PF00561 alpha/beta hydrolase fold JM952_RS01120 PF03692 Putative zinc- or iron-chelating domain JM952_RS01125 PF00501 AMP-binding enzyme JM952_RS01130 PF00486 Transcriptional regulatory protein, C terminal JM952_RS01130 PF00072 Response regulator receiver domain JM952_RS01145 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JM952_RS01160 PF07478 D-ala D-ala ligase C-terminus JM952_RS01160 PF01820 D-ala D-ala ligase N-terminus JM952_RS01170 PF03109 ABC1 family JM952_RS01175 PF00849 RNA pseudouridylate synthase JM952_RS01185 PF00472 RF-1 domain JM952_RS01200 PF01432 Peptidase family M3 JM952_RS01210 PF12706 Beta-lactamase superfamily domain JM952_RS01225 PF12833 Helix-turn-helix domain JM952_RS01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS01230 PF03466 LysR substrate binding domain JM952_RS01235 PF01274 Malate synthase JM952_RS01240 PF00463 Isocitrate lyase family JM952_RS01245 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS01265 PF00326 Prolyl oligopeptidase family JM952_RS01270 PF00289 Biotin carboxylase, N-terminal domain JM952_RS01270 PF00364 Biotin-requiring enzyme JM952_RS01270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JM952_RS01270 PF18140 Propionyl-coenzyme A carboxylase BT domain JM952_RS01270 PF02785 Biotin carboxylase C-terminal domain JM952_RS01275 PF01039 Carboxyl transferase domain JM952_RS01280 PF02770 Acyl-CoA dehydrogenase, middle domain JM952_RS01280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM952_RS01280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM952_RS01320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JM952_RS01335 PF07683 Cobalamin synthesis protein cobW C-terminal domain JM952_RS01335 PF02492 CobW/HypB/UreG, nucleotide-binding domain JM952_RS01355 PF03969 AFG1-like ATPase JM952_RS01365 PF01047 MarR family JM952_RS01370 PF02566 OsmC-like protein JM952_RS01380 PF07859 alpha/beta hydrolase fold JM952_RS01400 PF00248 Aldo/keto reductase family JM952_RS01405 PF00107 Zinc-binding dehydrogenase JM952_RS01405 PF16884 N-terminal domain of oxidoreductase JM952_RS01410 PF00248 Aldo/keto reductase family JM952_RS01420 PF00849 RNA pseudouridylate synthase JM952_RS01430 PF00270 DEAD/DEAH box helicase JM952_RS01430 PF04408 Helicase associated domain (HA2) JM952_RS01430 PF08482 ATP-dependent helicase C-terminal JM952_RS01430 PF00271 Helicase conserved C-terminal domain JM952_RS01435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS01435 PF00672 HAMP domain JM952_RS01435 PF02203 Tar ligand binding domain homologue JM952_RS01440 PF07308 Protein of unknown function (DUF1456) JM952_RS01445 PF00576 HIUase/Transthyretin family JM952_RS01450 PF13454 FAD-NAD(P)-binding JM952_RS01470 PF00266 Aminotransferase class-V JM952_RS01475 PF01546 Peptidase family M20/M25/M40 JM952_RS01475 PF07687 Peptidase dimerisation domain JM952_RS01480 PF03466 LysR substrate binding domain JM952_RS01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS01490 PF07690 Major Facilitator Superfamily JM952_RS01500 PF13091 PLD-like domain JM952_RS01510 PF01425 Amidase JM952_RS01515 PF01156 Inosine-uridine preferring nucleoside hydrolase JM952_RS01525 PF00860 Permease family JM952_RS01530 PF00111 2Fe-2S iron-sulfur cluster binding domain JM952_RS01535 PF00355 Rieske [2Fe-2S] domain JM952_RS01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS01540 PF03466 LysR substrate binding domain JM952_RS01545 PF01026 TatD related DNase JM952_RS01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS01555 PF03466 LysR substrate binding domain JM952_RS01560 PF07690 Major Facilitator Superfamily JM952_RS01580 PF02146 Sir2 family JM952_RS01585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JM952_RS01590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JM952_RS01590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JM952_RS01600 PF00551 Formyl transferase JM952_RS01610 PF00106 short chain dehydrogenase JM952_RS01620 PF02219 Methylenetetrahydrofolate reductase JM952_RS01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS01625 PF03466 LysR substrate binding domain JM952_RS01630 PF03358 NADPH-dependent FMN reductase JM952_RS01640 PF08267 Cobalamin-independent synthase, N-terminal domain JM952_RS01640 PF01717 Cobalamin-independent synthase, Catalytic domain JM952_RS01655 PF05368 NmrA-like family JM952_RS01660 PF01638 HxlR-like helix-turn-helix JM952_RS01670 PF00672 HAMP domain JM952_RS01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS01755 PF00589 Phage integrase family JM952_RS01755 PF13495 Phage integrase, N-terminal SAM-like domain JM952_RS01765 PF00920 Dehydratase family JM952_RS01775 PF03692 Putative zinc- or iron-chelating domain JM952_RS01785 PF00132 Bacterial transferase hexapeptide (six repeats) JM952_RS01795 PF07690 Major Facilitator Superfamily JM952_RS01800 PF11871 Domain of unknown function (DUF3391) JM952_RS01800 PF01966 HD domain JM952_RS01820 PF00171 Aldehyde dehydrogenase family JM952_RS01830 PF01494 FAD binding domain JM952_RS01840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JM952_RS01840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JM952_RS01845 PF00230 Major intrinsic protein JM952_RS01850 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JM952_RS01850 PF01266 FAD dependent oxidoreductase JM952_RS01855 PF00455 DeoR C terminal sensor domain JM952_RS01855 PF08220 DeoR-like helix-turn-helix domain JM952_RS01860 PF00970 Oxidoreductase FAD-binding domain JM952_RS01860 PF00111 2Fe-2S iron-sulfur cluster binding domain JM952_RS01865 PF00355 Rieske [2Fe-2S] domain JM952_RS01870 PF01144 Coenzyme A transferase JM952_RS01875 PF01144 Coenzyme A transferase JM952_RS01880 PF02803 Thiolase, C-terminal domain JM952_RS01880 PF00108 Thiolase, N-terminal domain JM952_RS01885 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JM952_RS01885 PF00775 Dioxygenase JM952_RS01890 PF00775 Dioxygenase JM952_RS01890 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JM952_RS01895 PF10397 Adenylosuccinate lyase C-terminus JM952_RS01895 PF00206 Lyase JM952_RS01900 PF12146 Serine aminopeptidase, S33 JM952_RS01905 PF02627 Carboxymuconolactone decarboxylase family JM952_RS01915 PF01614 Bacterial transcriptional regulator JM952_RS01915 PF09339 IclR helix-turn-helix domain JM952_RS01925 PF07859 alpha/beta hydrolase fold JM952_RS01930 PF10677 Protein of unknown function (DUF2490) JM952_RS01935 PF01134 Glucose inhibited division protein A JM952_RS01935 PF13932 GidA associated domain JM952_RS01945 PF00291 Pyridoxal-phosphate dependent enzyme JM952_RS01965 PF13649 Methyltransferase domain JM952_RS01975 PF12697 Alpha/beta hydrolase family JM952_RS01985 PF00155 Aminotransferase class I and II JM952_RS01990 PF06968 Biotin and Thiamin Synthesis associated domain JM952_RS01990 PF04055 Radical SAM superfamily JM952_RS02000 PF01040 UbiA prenyltransferase family JM952_RS02010 PF00589 Phage integrase family JM952_RS02010 PF13356 Arm DNA-binding domain JM952_RS02020 PF00593 TonB dependent receptor JM952_RS02020 PF07715 TonB-dependent Receptor Plug Domain JM952_RS02025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JM952_RS02025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JM952_RS02040 PF00593 TonB dependent receptor JM952_RS02040 PF07715 TonB-dependent Receptor Plug Domain JM952_RS02060 PF00924 Mechanosensitive ion channel JM952_RS02060 PF12795 Mechanosensitive ion channel porin domain JM952_RS02060 PF12794 Mechanosensitive ion channel inner membrane domain 1 JM952_RS02065 PF00884 Sulfatase JM952_RS02075 PF03109 ABC1 family JM952_RS02080 PF05661 Protein of unknown function (DUF808) JM952_RS02085 PF02638 Glycosyl hydrolase-like 10 JM952_RS02090 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS02095 PF08323 Starch synthase catalytic domain JM952_RS02095 PF00534 Glycosyl transferases group 1 JM952_RS02100 PF00128 Alpha amylase, catalytic domain JM952_RS02100 PF02806 Alpha amylase, C-terminal all-beta domain JM952_RS02100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM952_RS02105 PF00128 Alpha amylase, catalytic domain JM952_RS02105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM952_RS02105 PF11941 Domain of unknown function (DUF3459) JM952_RS02110 PF02446 4-alpha-glucanotransferase JM952_RS02115 PF00128 Alpha amylase, catalytic domain JM952_RS02125 PF00128 Alpha amylase, catalytic domain JM952_RS02125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM952_RS02130 PF13460 NAD(P)H-binding JM952_RS02145 PF06903 VirK protein JM952_RS02150 PF02321 Outer membrane efflux protein JM952_RS02155 PF00440 Bacterial regulatory proteins, tetR family JM952_RS02165 PF00873 AcrB/AcrD/AcrF family JM952_RS02180 PF00270 DEAD/DEAH box helicase JM952_RS02180 PF00271 Helicase conserved C-terminal domain JM952_RS02190 PF02817 e3 binding domain JM952_RS02190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JM952_RS02190 PF00364 Biotin-requiring enzyme JM952_RS02200 PF02780 Transketolase, C-terminal domain JM952_RS02200 PF02779 Transketolase, pyrimidine binding domain JM952_RS02205 PF00676 Dehydrogenase E1 component JM952_RS02215 PF03301 Tryptophan 2,3-dioxygenase JM952_RS02220 PF00854 POT family JM952_RS02230 PF01047 MarR family JM952_RS02235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM952_RS02240 PF04480 Protein of unknown function (DUF559) JM952_RS02245 PF04209 homogentisate 1,2-dioxygenase JM952_RS02265 PF03334 Na+/H+ antiporter subunit JM952_RS02270 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JM952_RS02280 PF00361 Proton-conducting membrane transporter JM952_RS02285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JM952_RS02290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JM952_RS02290 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JM952_RS02290 PF00361 Proton-conducting membrane transporter JM952_RS02290 PF13244 Domain of unknown function (DUF4040) JM952_RS02330 PF01259 SAICAR synthetase JM952_RS02335 PF00226 DnaJ domain JM952_RS02335 PF01556 DnaJ C terminal domain JM952_RS02335 PF00684 DnaJ central domain JM952_RS02345 PF00834 Ribulose-phosphate 3 epimerase family JM952_RS02355 PF00781 Diacylglycerol kinase catalytic domain JM952_RS02360 PF04715 Anthranilate synthase component I, N terminal region JM952_RS02360 PF00425 chorismate binding enzyme JM952_RS02365 PF00155 Aminotransferase class I and II JM952_RS02375 PF00117 Glutamine amidotransferase class-I JM952_RS02380 PF01613 Flavin reductase like domain JM952_RS02385 PF02885 Glycosyl transferase family, helical bundle domain JM952_RS02385 PF00591 Glycosyl transferase family, a/b domain JM952_RS02390 PF00218 Indole-3-glycerol phosphate synthase JM952_RS02400 PF00027 Cyclic nucleotide-binding domain JM952_RS02400 PF00325 Bacterial regulatory proteins, crp family JM952_RS02405 PF02675 S-adenosylmethionine decarboxylase JM952_RS02410 PF00893 Small Multidrug Resistance protein JM952_RS02415 PF03232 Ubiquinone biosynthesis protein COQ7 JM952_RS02420 PF00572 Ribosomal protein L13 JM952_RS02425 PF00380 Ribosomal protein S9/S16 JM952_RS02440 PF00293 NUDIX domain JM952_RS02450 PF00210 Ferritin-like domain JM952_RS02455 PF00672 HAMP domain JM952_RS02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS02455 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS02455 PF01627 Hpt domain JM952_RS02455 PF00072 Response regulator receiver domain JM952_RS02455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JM952_RS02460 PF00072 Response regulator receiver domain JM952_RS02460 PF00486 Transcriptional regulatory protein, C terminal JM952_RS02480 PF01521 Iron-sulphur cluster biosynthesis JM952_RS02485 PF00293 NUDIX domain JM952_RS02485 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JM952_RS02485 PF09297 NADH pyrophosphatase zinc ribbon domain JM952_RS02490 PF17113 Regulatory signalling modulator protein AmpE JM952_RS02490 PF03186 CobD/Cbib protein JM952_RS02525 PF07690 Major Facilitator Superfamily JM952_RS02535 PF12805 FUSC-like inner membrane protein yccS JM952_RS02540 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JM952_RS02540 PF02843 Phosphoribosylglycinamide synthetase, C domain JM952_RS02540 PF02844 Phosphoribosylglycinamide synthetase, N domain JM952_RS02550 PF01808 AICARFT/IMPCHase bienzyme JM952_RS02550 PF02142 MGS-like domain JM952_RS02555 PF01066 CDP-alcohol phosphatidyltransferase JM952_RS02560 PF12147 Putative methyltransferase JM952_RS02560 PF12146 Serine aminopeptidase, S33 JM952_RS02565 PF00782 Dual specificity phosphatase, catalytic domain JM952_RS02600 PF00818 Ice nucleation protein repeat JM952_RS02600 PF00818 Ice nucleation protein repeat JM952_RS02605 PF02954 Bacterial regulatory protein, Fis family JM952_RS02615 PF01381 Helix-turn-helix JM952_RS02640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JM952_RS02640 PF02785 Biotin carboxylase C-terminal domain JM952_RS02640 PF00289 Biotin carboxylase, N-terminal domain JM952_RS02650 PF00364 Biotin-requiring enzyme JM952_RS02655 PF01220 Dehydroquinase class II JM952_RS02660 PF11412 Disulphide bond corrector protein DsbC JM952_RS02660 PF02683 Cytochrome C biogenesis protein transmembrane region JM952_RS02665 PF03091 CutA1 divalent ion tolerance protein JM952_RS02670 PF04231 Endonuclease I JM952_RS02675 PF00166 Chaperonin 10 Kd subunit JM952_RS02680 PF00118 TCP-1/cpn60 chaperonin family JM952_RS02685 PF00271 Helicase conserved C-terminal domain JM952_RS02685 PF00176 SNF2 family N-terminal domain JM952_RS02690 PF00270 DEAD/DEAH box helicase JM952_RS02690 PF13749 Putative ATP-dependent DNA helicase recG C-terminal JM952_RS02690 PF17191 RecG wedge domain JM952_RS02700 PF01609 Transposase DDE domain JM952_RS02700 PF05598 Transposase domain (DUF772) JM952_RS02750 PF05598 Transposase domain (DUF772) JM952_RS02750 PF01609 Transposase DDE domain JM952_RS02755 PF00793 DAHP synthetase I family JM952_RS02765 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JM952_RS02765 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JM952_RS02780 PF08450 SMP-30/Gluconolactonase/LRE-like region JM952_RS02795 PF16220 Domain of unknown function (DUF4880) JM952_RS02795 PF04773 FecR protein JM952_RS02805 PF07715 TonB-dependent Receptor Plug Domain JM952_RS02805 PF00593 TonB dependent receptor JM952_RS02805 PF07660 Secretin and TonB N terminus short domain JM952_RS02825 PF03710 Glutamate-ammonia ligase adenylyltransferase JM952_RS02825 PF08335 GlnD PII-uridylyltransferase JM952_RS02835 PF02592 Putative vitamin uptake transporter JM952_RS02855 PF00881 Nitroreductase family JM952_RS02860 PF04264 YceI-like domain JM952_RS02870 PF13847 Methyltransferase domain JM952_RS02870 PF03551 Transcriptional regulator PadR-like family JM952_RS02875 PF16957 Malonate decarboxylase, alpha subunit, transporter JM952_RS02880 PF06857 Malonate decarboxylase delta subunit (MdcD) JM952_RS02885 PF01039 Carboxyl transferase domain JM952_RS02895 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JM952_RS02900 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JM952_RS02905 PF16197 Ketoacyl-synthetase C-terminal extension JM952_RS02905 PF00698 Acyl transferase domain JM952_RS02905 PF00550 Phosphopantetheine attachment site JM952_RS02905 PF08659 KR domain JM952_RS02905 PF02801 Beta-ketoacyl synthase, C-terminal domain JM952_RS02905 PF00109 Beta-ketoacyl synthase, N-terminal domain JM952_RS02915 PF07729 FCD domain JM952_RS02915 PF00392 Bacterial regulatory proteins, gntR family JM952_RS02950 PF07745 Glycosyl hydrolase family 53 JM952_RS02955 PF17831 Pyruvate dehydrogenase E1 component middle domain JM952_RS02955 PF00456 Transketolase, thiamine diphosphate binding domain JM952_RS02960 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JM952_RS03030 PF13409 Glutathione S-transferase, N-terminal domain JM952_RS03055 PF11838 ERAP1-like C-terminal domain JM952_RS03055 PF01433 Peptidase family M1 domain JM952_RS03090 PF12823 Domain of unknown function (DUF3817) JM952_RS03090 PF03176 MMPL family JM952_RS03100 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JM952_RS03100 PF00326 Prolyl oligopeptidase family JM952_RS03105 PF07759 Protein of unknown function (DUF1615) JM952_RS03110 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS03115 PF02082 Transcriptional regulator JM952_RS03120 PF13192 Thioredoxin domain JM952_RS03120 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS03150 PF00892 EamA-like transporter family JM952_RS03155 PF00497 Bacterial extracellular solute-binding proteins, family 3 JM952_RS03165 PF03330 Lytic transglycolase JM952_RS03170 PF00553 Cellulose binding domain JM952_RS03170 PF00041 Fibronectin type III domain JM952_RS03170 PF01341 Glycosyl hydrolases family 6 JM952_RS03180 PF00324 Amino acid permease JM952_RS03185 PF01544 CorA-like Mg2+ transporter protein JM952_RS03200 PF01204 Trehalase JM952_RS03210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JM952_RS03210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JM952_RS03210 PF06827 Zinc finger found in FPG and IleRS JM952_RS03245 PF00553 Cellulose binding domain JM952_RS03245 PF00150 Cellulase (glycosyl hydrolase family 5) JM952_RS03250 PF01740 STAS domain JM952_RS03250 PF00916 Sulfate permease family JM952_RS03255 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS03260 PF07715 TonB-dependent Receptor Plug Domain JM952_RS03260 PF00593 TonB dependent receptor JM952_RS03260 PF07660 Secretin and TonB N terminus short domain JM952_RS03270 PF02080 TrkA-C domain JM952_RS03270 PF03600 Citrate transporter JM952_RS03275 PF13632 Glycosyl transferase family group 2 JM952_RS03285 PF07694 5TMR of 5TMR-LYT JM952_RS03285 PF06580 Histidine kinase JM952_RS03290 PF04397 LytTr DNA-binding domain JM952_RS03290 PF00072 Response regulator receiver domain JM952_RS03295 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JM952_RS03295 PF03900 Porphobilinogen deaminase, C-terminal domain JM952_RS03325 PF00326 Prolyl oligopeptidase family JM952_RS03325 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JM952_RS03340 PF00155 Aminotransferase class I and II JM952_RS03345 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JM952_RS03345 PF00326 Prolyl oligopeptidase family JM952_RS03350 PF04304 Protein of unknown function (DUF454) JM952_RS03360 PF01678 Diaminopimelate epimerase JM952_RS03370 PF02899 Phage integrase, N-terminal SAM-like domain JM952_RS03370 PF00589 Phage integrase family JM952_RS03375 PF00227 Proteasome subunit JM952_RS03380 PF00004 ATPase family associated with various cellular activities (AAA) JM952_RS03380 PF07724 AAA domain (Cdc48 subfamily) JM952_RS03380 PF10431 C-terminal, D2-small domain, of ClpB protein JM952_RS03395 PF13673 Acetyltransferase (GNAT) domain JM952_RS03400 PF13533 Biotin-lipoyl like JM952_RS03410 PF01209 ubiE/COQ5 methyltransferase family JM952_RS03415 PF00563 EAL domain JM952_RS03415 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS03415 PF03707 Bacterial signalling protein N terminal repeat JM952_RS03420 PF11838 ERAP1-like C-terminal domain JM952_RS03420 PF01433 Peptidase family M1 domain JM952_RS03435 PF13360 PQQ-like domain JM952_RS03440 PF00497 Bacterial extracellular solute-binding proteins, family 3 JM952_RS03455 PF00107 Zinc-binding dehydrogenase JM952_RS03455 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS03460 PF07660 Secretin and TonB N terminus short domain JM952_RS03460 PF07715 TonB-dependent Receptor Plug Domain JM952_RS03460 PF00593 TonB dependent receptor JM952_RS03470 PF01590 GAF domain JM952_RS03470 PF02954 Bacterial regulatory protein, Fis family JM952_RS03470 PF00158 Sigma-54 interaction domain JM952_RS03475 PF00294 pfkB family carbohydrate kinase JM952_RS03490 PF04085 rod shape-determining protein MreC JM952_RS03500 PF03717 Penicillin-binding Protein dimerisation domain JM952_RS03500 PF00905 Penicillin binding protein transpeptidase domain JM952_RS03505 PF01098 Cell cycle protein JM952_RS03555 PF00295 Glycosyl hydrolases family 28 JM952_RS03560 PF13406 Transglycosylase SLT domain JM952_RS03565 PF05036 Sporulation related domain JM952_RS03565 PF03330 Lytic transglycolase JM952_RS03570 PF00768 D-alanyl-D-alanine carboxypeptidase JM952_RS03570 PF07943 Penicillin-binding protein 5, C-terminal domain JM952_RS03580 PF04359 Protein of unknown function (DUF493) JM952_RS03585 PF03099 Biotin/lipoate A/B protein ligase family JM952_RS03590 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JM952_RS03590 PF04055 Radical SAM superfamily JM952_RS03595 PF11818 C-terminal domain of tail specific protease (DUF3340) JM952_RS03595 PF00595 PDZ domain JM952_RS03595 PF03572 Peptidase family S41 JM952_RS03595 PF17804 Tail specific protease N-terminal domain JM952_RS03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS03605 PF03466 LysR substrate binding domain JM952_RS03615 PF00293 NUDIX domain JM952_RS03615 PF01467 Cytidylyltransferase-like JM952_RS03650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JM952_RS03650 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JM952_RS03655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM952_RS03655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JM952_RS03660 PF04972 BON domain JM952_RS03665 PF01590 GAF domain JM952_RS03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS03665 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS03665 PF08446 PAS fold JM952_RS03665 PF00360 Phytochrome region JM952_RS03670 PF00072 Response regulator receiver domain JM952_RS03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS03675 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS03680 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JM952_RS03720 PF03958 Bacterial type II/III secretion system short domain JM952_RS03720 PF00263 Bacterial type II and III secretion system protein JM952_RS03725 PF00437 Type II/IV secretion system protein JM952_RS03730 PF00482 Type II secretion system (T2SS), protein F JM952_RS03735 PF07963 Prokaryotic N-terminal methylation motif JM952_RS03735 PF08334 Type II secretion system (T2SS), protein G JM952_RS03745 PF02501 Type II secretion system (T2SS), protein I JM952_RS03745 PF07963 Prokaryotic N-terminal methylation motif JM952_RS03750 PF11612 Type II secretion system (T2SS), protein J JM952_RS03750 PF07963 Prokaryotic N-terminal methylation motif JM952_RS03755 PF03934 Type II secretion system (T2SS), protein K JM952_RS03775 PF07702 UTRA domain JM952_RS03775 PF00392 Bacterial regulatory proteins, gntR family JM952_RS03780 PF07690 Major Facilitator Superfamily JM952_RS03785 PF00356 Bacterial regulatory proteins, lacI family JM952_RS03790 PF01380 SIS domain JM952_RS03795 PF01979 Amidohydrolase family JM952_RS03810 PF12627 Probable RNA and SrmB- binding site of polymerase A JM952_RS03810 PF01743 Poly A polymerase head domain JM952_RS03810 PF01966 HD domain JM952_RS03815 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JM952_RS03815 PF01464 Transglycosylase SLT domain JM952_RS03820 PF07715 TonB-dependent Receptor Plug Domain JM952_RS03820 PF00593 TonB dependent receptor JM952_RS03825 PF05199 GMC oxidoreductase JM952_RS03825 PF00732 GMC oxidoreductase JM952_RS03830 PF00171 Aldehyde dehydrogenase family JM952_RS03835 PF02028 BCCT, betaine/carnitine/choline family transporter JM952_RS03845 PF01323 DSBA-like thioredoxin domain JM952_RS03855 PF00034 Cytochrome c JM952_RS03860 PF01926 50S ribosome-binding GTPase JM952_RS03865 PF04107 Glutamate-cysteine ligase family 2(GCS2) JM952_RS03870 PF00672 HAMP domain JM952_RS03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS03870 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS03875 PF00072 Response regulator receiver domain JM952_RS03875 PF00486 Transcriptional regulatory protein, C terminal JM952_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS03890 PF03466 LysR substrate binding domain JM952_RS03895 PF02583 Metal-sensitive transcriptional repressor JM952_RS03900 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS03900 PF00107 Zinc-binding dehydrogenase JM952_RS03905 PF04828 Glutathione-dependent formaldehyde-activating enzyme JM952_RS03910 PF00756 Putative esterase JM952_RS03925 PF00155 Aminotransferase class I and II JM952_RS03925 PF00392 Bacterial regulatory proteins, gntR family JM952_RS03930 PF02567 Phenazine biosynthesis-like protein JM952_RS03935 PF00892 EamA-like transporter family JM952_RS03945 PF02645 Uncharacterised protein, DegV family COG1307 JM952_RS03985 PF01979 Amidohydrolase family JM952_RS03990 PF01979 Amidohydrolase family JM952_RS04005 PF00462 Glutaredoxin JM952_RS04010 PF01522 Polysaccharide deacetylase JM952_RS04025 PF00155 Aminotransferase class I and II JM952_RS04035 PF03193 RsgA GTPase JM952_RS04050 PF00128 Alpha amylase, catalytic domain JM952_RS04065 PF00356 Bacterial regulatory proteins, lacI family JM952_RS04070 PF00106 short chain dehydrogenase JM952_RS04075 PF03600 Citrate transporter JM952_RS04085 PF00072 Response regulator receiver domain JM952_RS04085 PF00486 Transcriptional regulatory protein, C terminal JM952_RS04090 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS04090 PF08521 Two-component sensor kinase N-terminal JM952_RS04100 PF00196 Bacterial regulatory proteins, luxR family JM952_RS04100 PF00072 Response regulator receiver domain JM952_RS04110 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS04120 PF00375 Sodium:dicarboxylate symporter family JM952_RS04125 PF00390 Malic enzyme, N-terminal domain JM952_RS04125 PF03949 Malic enzyme, NAD binding domain JM952_RS04125 PF01515 Phosphate acetyl/butaryl transferase JM952_RS04150 PF03279 Bacterial lipid A biosynthesis acyltransferase JM952_RS04155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JM952_RS04160 PF02321 Outer membrane efflux protein JM952_RS04175 PF03707 Bacterial signalling protein N terminal repeat JM952_RS04175 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS04175 PF13188 PAS domain JM952_RS04175 PF00563 EAL domain JM952_RS04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS04185 PF00330 Aconitase family (aconitate hydratase) JM952_RS04190 PF00694 Aconitase C-terminal domain JM952_RS04195 PF08241 Methyltransferase domain JM952_RS04200 PF00180 Isocitrate/isopropylmalate dehydrogenase JM952_RS04205 PF00682 HMGL-like JM952_RS04205 PF08502 LeuA allosteric (dimerisation) domain JM952_RS04210 PF00291 Pyridoxal-phosphate dependent enzyme JM952_RS04220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JM952_RS04220 PF00205 Thiamine pyrophosphate enzyme, central domain JM952_RS04220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JM952_RS04225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JM952_RS04225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JM952_RS04235 PF00672 HAMP domain JM952_RS04235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS04235 PF02203 Tar ligand binding domain homologue JM952_RS04240 PF00326 Prolyl oligopeptidase family JM952_RS04240 PF07676 WD40-like Beta Propeller Repeat JM952_RS04245 PF01964 Radical SAM ThiC family JM952_RS04245 PF13667 ThiC-associated domain JM952_RS04250 PF18500 CadC C-terminal domain 1 JM952_RS04250 PF00486 Transcriptional regulatory protein, C terminal JM952_RS04255 PF12833 Helix-turn-helix domain JM952_RS04260 PF00593 TonB dependent receptor JM952_RS04260 PF07715 TonB-dependent Receptor Plug Domain JM952_RS04275 PF00719 Inorganic pyrophosphatase JM952_RS04285 PF03030 Inorganic H+ pyrophosphatase JM952_RS04305 PF00365 Phosphofructokinase JM952_RS04315 PF08245 Mur ligase middle domain JM952_RS04315 PF02875 Mur ligase family, glutamate ligase domain JM952_RS04315 PF01225 Mur ligase family, catalytic domain JM952_RS04325 PF01062 Bestrophin, RFP-TM, chloride channel JM952_RS04330 PF01569 PAP2 superfamily JM952_RS04350 PF00520 Ion transport protein JM952_RS04350 PF00027 Cyclic nucleotide-binding domain JM952_RS04355 PF00202 Aminotransferase class-III JM952_RS04370 PF01593 Flavin containing amine oxidoreductase JM952_RS04375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JM952_RS04375 PF00034 Cytochrome c JM952_RS04385 PF00155 Aminotransferase class I and II JM952_RS04390 PF00127 Copper binding proteins, plastocyanin/azurin family JM952_RS04395 PF00196 Bacterial regulatory proteins, luxR family JM952_RS04395 PF17874 MalT-like TPR region JM952_RS04400 PF00202 Aminotransferase class-III JM952_RS04410 PF02581 Thiamine monophosphate synthase JM952_RS04415 PF00301 Rubredoxin JM952_RS04420 PF13369 Transglutaminase-like superfamily JM952_RS04430 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JM952_RS04440 PF01812 5-formyltetrahydrofolate cyclo-ligase family JM952_RS04450 PF05164 Cell division protein ZapA JM952_RS04460 PF03695 Uncharacterised protein family (UPF0149) JM952_RS04465 PF05195 Aminopeptidase P, N-terminal domain JM952_RS04465 PF00557 Metallopeptidase family M24 JM952_RS04475 PF00557 Metallopeptidase family M24 JM952_RS04490 PF06969 HemN C-terminal domain JM952_RS04490 PF04055 Radical SAM superfamily JM952_RS04495 PF01725 Ham1 family JM952_RS04500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM952_RS04505 PF01138 3' exoribonuclease family, domain 1 JM952_RS04505 PF03725 3' exoribonuclease family, domain 2 JM952_RS04510 PF08340 Domain of unknown function (DUF1732) JM952_RS04510 PF03755 YicC-like family, N-terminal region JM952_RS04515 PF00625 Guanylate kinase JM952_RS04520 PF01192 RNA polymerase Rpb6 JM952_RS04525 PF13291 ACT domain JM952_RS04525 PF04607 Region found in RelA / SpoT proteins JM952_RS04525 PF02824 TGS domain JM952_RS04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS04535 PF03466 LysR substrate binding domain JM952_RS04540 PF00701 Dihydrodipicolinate synthetase family JM952_RS04545 PF00171 Aldehyde dehydrogenase family JM952_RS04550 PF07690 Major Facilitator Superfamily JM952_RS04555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM952_RS04555 PF13378 Enolase C-terminal domain-like JM952_RS04560 PF03573 outer membrane porin, OprD family JM952_RS04565 PF08666 SAF domain JM952_RS04565 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JM952_RS04570 PF01042 Endoribonuclease L-PSP JM952_RS04575 PF00270 DEAD/DEAH box helicase JM952_RS04575 PF00271 Helicase conserved C-terminal domain JM952_RS04575 PF17191 RecG wedge domain JM952_RS04580 PF01156 Inosine-uridine preferring nucleoside hydrolase JM952_RS04585 PF01197 Ribosomal protein L31 JM952_RS04590 PF00285 Citrate synthase, C-terminal domain JM952_RS04600 PF00905 Penicillin binding protein transpeptidase domain JM952_RS04600 PF00912 Transglycosylase JM952_RS04600 PF17092 Penicillin-binding protein OB-like domain JM952_RS04605 PF11104 Type IV pilus assembly protein PilM; JM952_RS04610 PF05137 Fimbrial assembly protein (PilN) JM952_RS04615 PF04350 Pilus assembly protein, PilO JM952_RS04620 PF04351 Pilus assembly protein, PilP JM952_RS04625 PF07660 Secretin and TonB N terminus short domain JM952_RS04625 PF03958 Bacterial type II/III secretion system short domain JM952_RS04625 PF00263 Bacterial type II and III secretion system protein JM952_RS04625 PF11741 AMIN domain JM952_RS04630 PF07726 ATPase family associated with various cellular activities (AAA) JM952_RS04630 PF17863 AAA lid domain JM952_RS04650 PF07584 Aerotolerance regulator N-terminal JM952_RS04650 PF00092 von Willebrand factor type A domain JM952_RS04660 PF00375 Sodium:dicarboxylate symporter family JM952_RS04665 PF00456 Transketolase, thiamine diphosphate binding domain JM952_RS04665 PF02780 Transketolase, C-terminal domain JM952_RS04665 PF02779 Transketolase, pyrimidine binding domain JM952_RS04670 PF12146 Serine aminopeptidase, S33 JM952_RS04680 PF04225 Opacity-associated protein A LysM-like domain JM952_RS04680 PF01551 Peptidase family M23 JM952_RS04685 PF01476 LysM domain JM952_RS04685 PF03734 L,D-transpeptidase catalytic domain JM952_RS04710 PF00005 ABC transporter JM952_RS04710 PF03459 TOBE domain JM952_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS04725 PF04273 Putative phosphatase (DUF442) JM952_RS04725 PF00753 Metallo-beta-lactamase superfamily JM952_RS04740 PF03922 OmpW family JM952_RS04755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JM952_RS04755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JM952_RS04775 PF00162 Phosphoglycerate kinase JM952_RS04780 PF13419 Haloacid dehalogenase-like hydrolase JM952_RS04785 PF00224 Pyruvate kinase, barrel domain JM952_RS04785 PF02887 Pyruvate kinase, alpha/beta domain JM952_RS04790 PF00274 Fructose-bisphosphate aldolase class-I JM952_RS04795 PF01661 Macro domain JM952_RS04805 PF00291 Pyridoxal-phosphate dependent enzyme JM952_RS04810 PF10414 Sirohaem synthase dimerisation region JM952_RS04810 PF14824 Sirohaem biosynthesis protein central JM952_RS04810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM952_RS04815 PF03466 LysR substrate binding domain JM952_RS04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS04825 PF01627 Hpt domain JM952_RS04825 PF00672 HAMP domain JM952_RS04825 PF00072 Response regulator receiver domain JM952_RS04825 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS04845 PF01507 Phosphoadenosine phosphosulfate reductase family JM952_RS04850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JM952_RS04850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JM952_RS04855 PF00258 Flavodoxin JM952_RS04855 PF00175 Oxidoreductase NAD-binding domain JM952_RS04855 PF00667 FAD binding domain JM952_RS04860 PF01507 Phosphoadenosine phosphosulfate reductase family JM952_RS04865 PF00009 Elongation factor Tu GTP binding domain JM952_RS04870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS04870 PF00529 HlyD membrane-fusion protein of T1SS JM952_RS04875 PF00873 AcrB/AcrD/AcrF family JM952_RS04880 PF01433 Peptidase family M1 domain JM952_RS04880 PF11838 ERAP1-like C-terminal domain JM952_RS04890 PF01235 Sodium:alanine symporter family JM952_RS04895 PF00588 SpoU rRNA Methylase family JM952_RS04895 PF08032 RNA 2'-O ribose methyltransferase substrate binding JM952_RS04900 PF00135 Carboxylesterase family JM952_RS04905 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation JM952_RS04905 PF14508 Glycosyl-hydrolase 97 N-terminal JM952_RS04905 PF10566 Glycoside hydrolase 97 JM952_RS04910 PF02837 Glycosyl hydrolases family 2, sugar binding domain JM952_RS04910 PF02929 Beta galactosidase small chain JM952_RS04910 PF16353 Domain of unknown function(DUF4981) JM952_RS04910 PF00703 Glycosyl hydrolases family 2 JM952_RS04910 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JM952_RS04925 PF00356 Bacterial regulatory proteins, lacI family JM952_RS04935 PF01741 Large-conductance mechanosensitive channel, MscL JM952_RS04940 PF01557 Fumarylacetoacetate (FAA) hydrolase family JM952_RS04955 PF02080 TrkA-C domain JM952_RS04955 PF03600 Citrate transporter JM952_RS04960 PF02390 Putative methyltransferase JM952_RS04965 PF05690 Thiazole biosynthesis protein ThiG JM952_RS04975 PF03797 Autotransporter beta-domain JM952_RS04975 PF00657 GDSL-like Lipase/Acylhydrolase JM952_RS05085 PF04002 RadC-like JAB domain JM952_RS05190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JM952_RS05190 PF00128 Alpha amylase, catalytic domain JM952_RS05195 PF08443 RimK-like ATP-grasp domain JM952_RS05195 PF18030 RimK PreATP-grasp domain JM952_RS05205 PF00072 Response regulator receiver domain JM952_RS05205 PF00486 Transcriptional regulatory protein, C terminal JM952_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS05210 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS05210 PF00989 PAS fold JM952_RS05210 PF11808 Phosphate regulon sensor protein PhoR JM952_RS05230 PF01121 Dephospho-CoA kinase JM952_RS05235 PF06750 Bacterial Peptidase A24 N-terminal domain JM952_RS05235 PF01478 Type IV leader peptidase family JM952_RS05240 PF00482 Type II secretion system (T2SS), protein F JM952_RS05245 PF00114 Pilin (bacterial filament) JM952_RS05245 PF07963 Prokaryotic N-terminal methylation motif JM952_RS05250 PF07963 Prokaryotic N-terminal methylation motif JM952_RS05250 PF00114 Pilin (bacterial filament) JM952_RS05255 PF00437 Type II/IV secretion system protein JM952_RS05255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JM952_RS05265 PF02954 Bacterial regulatory protein, Fis family JM952_RS05265 PF00072 Response regulator receiver domain JM952_RS05265 PF00158 Sigma-54 interaction domain JM952_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS05270 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS05275 PF00549 CoA-ligase JM952_RS05275 PF08442 ATP-grasp domain JM952_RS05280 PF00549 CoA-ligase JM952_RS05280 PF02629 CoA binding domain JM952_RS05295 PF00795 Carbon-nitrogen hydrolase JM952_RS05295 PF02540 NAD synthase JM952_RS05305 PF13525 Outer membrane lipoprotein JM952_RS05310 PF00849 RNA pseudouridylate synthase JM952_RS05315 PF02578 Multi-copper polyphenol oxidoreductase laccase JM952_RS05330 PF00672 HAMP domain JM952_RS05330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS05330 PF02203 Tar ligand binding domain homologue JM952_RS05335 PF01011 PQQ enzyme repeat JM952_RS05345 PF00982 Glycosyltransferase family 20 JM952_RS05350 PF00723 Glycosyl hydrolases family 15 JM952_RS05355 PF02358 Trehalose-phosphatase JM952_RS05360 PF07715 TonB-dependent Receptor Plug Domain JM952_RS05360 PF00593 TonB dependent receptor JM952_RS05395 PF01541 GIY-YIG catalytic domain JM952_RS05400 PF00005 ABC transporter JM952_RS05405 PF02861 Clp amino terminal domain, pathogenicity island component JM952_RS05405 PF10431 C-terminal, D2-small domain, of ClpB protein JM952_RS05405 PF00004 ATPase family associated with various cellular activities (AAA) JM952_RS05405 PF07724 AAA domain (Cdc48 subfamily) JM952_RS05405 PF17871 AAA lid domain JM952_RS05415 PF01053 Cys/Met metabolism PLP-dependent enzyme JM952_RS05420 PF00593 TonB dependent receptor JM952_RS05420 PF07715 TonB-dependent Receptor Plug Domain JM952_RS05435 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JM952_RS05435 PF12557 Cob(I)alamin adenosyltransferase N terminal JM952_RS05440 PF07685 CobB/CobQ-like glutamine amidotransferase domain JM952_RS05440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JM952_RS05445 PF17113 Regulatory signalling modulator protein AmpE JM952_RS05445 PF03186 CobD/Cbib protein JM952_RS05450 PF00155 Aminotransferase class I and II JM952_RS05455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JM952_RS05455 PF07685 CobB/CobQ-like glutamine amidotransferase domain JM952_RS05460 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JM952_RS05465 PF02277 Phosphoribosyltransferase JM952_RS05475 PF02654 Cobalamin-5-phosphate synthase JM952_RS05495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JM952_RS05495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JM952_RS05500 PF06276 Ferric iron reductase FhuF-like transporter JM952_RS05500 PF04183 IucA / IucC family JM952_RS05505 PF07690 Major Facilitator Superfamily JM952_RS05510 PF06276 Ferric iron reductase FhuF-like transporter JM952_RS05510 PF04183 IucA / IucC family JM952_RS05520 PF07715 TonB-dependent Receptor Plug Domain JM952_RS05520 PF07660 Secretin and TonB N terminus short domain JM952_RS05520 PF00593 TonB dependent receptor JM952_RS05530 PF00999 Sodium/hydrogen exchanger family JM952_RS05530 PF02254 TrkA-N domain JM952_RS05535 PF00067 Cytochrome P450 JM952_RS05540 PF07715 TonB-dependent Receptor Plug Domain JM952_RS05540 PF00593 TonB dependent receptor JM952_RS05545 PF00593 TonB dependent receptor JM952_RS05545 PF07715 TonB-dependent Receptor Plug Domain JM952_RS05555 PF07715 TonB-dependent Receptor Plug Domain JM952_RS05555 PF00593 TonB dependent receptor JM952_RS05560 PF00005 ABC transporter JM952_RS05560 PF12848 ABC transporter JM952_RS05570 PF03466 LysR substrate binding domain JM952_RS05570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS05580 PF07859 alpha/beta hydrolase fold JM952_RS05580 PF13472 GDSL-like Lipase/Acylhydrolase family JM952_RS05585 PF04185 Phosphoesterase family JM952_RS05585 PF05506 Domain of unknown function (DUF756) JM952_RS05595 PF05116 Sucrose-6F-phosphate phosphohydrolase JM952_RS05595 PF00982 Glycosyltransferase family 20 JM952_RS05600 PF07690 Major Facilitator Superfamily JM952_RS05625 PF01336 OB-fold nucleic acid binding domain JM952_RS05625 PF00152 tRNA synthetases class II (D, K and N) JM952_RS05625 PF02938 GAD domain JM952_RS05640 PF01709 Transcriptional regulator JM952_RS05645 PF02075 Crossover junction endodeoxyribonuclease RuvC JM952_RS05650 PF07499 RuvA, C-terminal domain JM952_RS05650 PF01330 RuvA N terminal domain JM952_RS05655 PF02705 K+ potassium transporter JM952_RS05665 PF17864 RuvB AAA lid domain JM952_RS05665 PF05491 RuvB C-terminal winged helix domain JM952_RS05665 PF05496 Holliday junction DNA helicase RuvB P-loop domain JM952_RS05670 PF03061 Thioesterase superfamily JM952_RS05675 PF01618 MotA/TolQ/ExbB proton channel family JM952_RS05680 PF02472 Biopolymer transport protein ExbD/TolR JM952_RS05690 PF04052 TolB amino-terminal domain JM952_RS05690 PF07676 WD40-like Beta Propeller Repeat JM952_RS05695 PF00691 OmpA family JM952_RS05705 PF04055 Radical SAM superfamily JM952_RS05710 PF06508 Queuosine biosynthesis protein QueC JM952_RS05745 PF00654 Voltage gated chloride channel JM952_RS05750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS05750 PF03466 LysR substrate binding domain JM952_RS05755 PF01810 LysE type translocator JM952_RS05775 PF01479 S4 domain JM952_RS05775 PF00849 RNA pseudouridylate synthase JM952_RS05790 PF00270 DEAD/DEAH box helicase JM952_RS05790 PF00271 Helicase conserved C-terminal domain JM952_RS05790 PF00570 HRDC domain JM952_RS05790 PF16124 RecQ zinc-binding JM952_RS05790 PF09382 RQC domain JM952_RS05795 PF00210 Ferritin-like domain JM952_RS05800 PF00270 DEAD/DEAH box helicase JM952_RS05800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JM952_RS05800 PF00271 Helicase conserved C-terminal domain JM952_RS05800 PF04408 Helicase associated domain (HA2) JM952_RS05800 PF11898 Domain of unknown function (DUF3418) JM952_RS05810 PF02685 Glucokinase JM952_RS05825 PF13186 Iron-sulfur cluster-binding domain JM952_RS05825 PF04055 Radical SAM superfamily JM952_RS05830 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JM952_RS05835 PF03070 TENA/THI-4/PQQC family JM952_RS05840 PF12706 Beta-lactamase superfamily domain JM952_RS05845 PF08042 PqqA family JM952_RS05850 PF13291 ACT domain JM952_RS05850 PF04607 Region found in RelA / SpoT proteins JM952_RS05850 PF02824 TGS domain JM952_RS05860 PF00535 Glycosyl transferase family 2 JM952_RS05865 PF14814 Bifunctional transglycosylase second domain JM952_RS05865 PF00912 Transglycosylase JM952_RS05865 PF00905 Penicillin binding protein transpeptidase domain JM952_RS05875 PF04851 Type III restriction enzyme, res subunit JM952_RS05875 PF13307 Helicase C-terminal domain JM952_RS05890 PF00814 Glycoprotease family JM952_RS05895 PF03747 ADP-ribosylglycohydrolase JM952_RS05905 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JM952_RS05905 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JM952_RS05910 PF00072 Response regulator receiver domain JM952_RS05915 PF00072 Response regulator receiver domain JM952_RS05920 PF01584 CheW-like domain JM952_RS05925 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JM952_RS05925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS05930 PF01584 CheW-like domain JM952_RS05930 PF00072 Response regulator receiver domain JM952_RS05930 PF01627 Hpt domain JM952_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS05930 PF02895 Signal transducing histidine kinase, homodimeric domain JM952_RS05960 PF04542 Sigma-70 region 2 JM952_RS05960 PF08281 Sigma-70, region 4 JM952_RS05965 PF12450 von Willebrand factor JM952_RS05965 PF00092 von Willebrand factor type A domain JM952_RS05965 PF12034 Domain of unknown function (DUF3520) JM952_RS05970 PF01112 Asparaginase JM952_RS05975 PF03932 CutC family JM952_RS05980 PF00067 Cytochrome P450 JM952_RS06015 PF11867 Domain of unknown function (DUF3387) JM952_RS06015 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JM952_RS06015 PF18766 SWI2/SNF2 ATPase JM952_RS06030 PF12161 HsdM N-terminal domain JM952_RS06030 PF02384 N-6 DNA Methylase JM952_RS06060 PF01301 Glycosyl hydrolases family 35 JM952_RS06065 PF07971 Glycosyl hydrolase family 92 JM952_RS06065 PF17678 Glycosyl hydrolase family 92 N-terminal domain JM952_RS06075 PF14310 Fibronectin type III-like domain JM952_RS06075 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS06075 PF01915 Glycosyl hydrolase family 3 C-terminal domain JM952_RS06075 PF07691 PA14 domain JM952_RS06085 PF00728 Glycosyl hydrolase family 20, catalytic domain JM952_RS06085 PF02838 Glycosyl hydrolase family 20, domain 2 JM952_RS06085 PF07691 PA14 domain JM952_RS06090 PF00704 Glycosyl hydrolases family 18 JM952_RS06090 PF01476 LysM domain JM952_RS06105 PF02685 Glucokinase JM952_RS06110 PF04452 RNA methyltransferase JM952_RS06115 PF00202 Aminotransferase class-III JM952_RS06120 PF00293 NUDIX domain JM952_RS06125 PF00459 Inositol monophosphatase family JM952_RS06130 PF03819 MazG nucleotide pyrophosphohydrolase domain JM952_RS06135 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JM952_RS06145 PF01145 SPFH domain / Band 7 family JM952_RS06145 PF16200 C-terminal region of band_7 JM952_RS06155 PF08669 Glycine cleavage T-protein C-terminal barrel domain JM952_RS06155 PF01571 Aminomethyltransferase folate-binding domain JM952_RS06160 PF01597 Glycine cleavage H-protein JM952_RS06190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM952_RS06190 PF02770 Acyl-CoA dehydrogenase, middle domain JM952_RS06190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM952_RS06190 PF09317 Domain of unknown function (DUF1974) JM952_RS06200 PF00440 Bacterial regulatory proteins, tetR family JM952_RS06205 PF07715 TonB-dependent Receptor Plug Domain JM952_RS06205 PF00593 TonB dependent receptor JM952_RS06215 PF01430 Hsp33 protein JM952_RS06220 PF00912 Transglycosylase JM952_RS06225 PF00535 Glycosyl transferase family 2 JM952_RS06230 PF00571 CBS domain JM952_RS06230 PF00478 IMP dehydrogenase / GMP reductase domain JM952_RS06235 PF05170 AsmA family JM952_RS06240 PF03006 Haemolysin-III related JM952_RS06245 PF00009 Elongation factor Tu GTP binding domain JM952_RS06245 PF16658 Class II release factor RF3, C-terminal domain JM952_RS06250 PF08460 Bacterial SH3 domain JM952_RS06250 PF01551 Peptidase family M23 JM952_RS06255 PF00561 alpha/beta hydrolase fold JM952_RS06260 PF01053 Cys/Met metabolism PLP-dependent enzyme JM952_RS06265 PF03447 Homoserine dehydrogenase, NAD binding domain JM952_RS06265 PF00696 Amino acid kinase family JM952_RS06265 PF00742 Homoserine dehydrogenase JM952_RS06270 PF12697 Alpha/beta hydrolase family JM952_RS06280 PF03313 Serine dehydratase alpha chain JM952_RS06280 PF03315 Serine dehydratase beta chain JM952_RS06300 PF04264 YceI-like domain JM952_RS06305 PF17149 Periplasmic sensor domain found in signal transduction proteins JM952_RS06305 PF00672 HAMP domain JM952_RS06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS06305 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS06305 PF01627 Hpt domain JM952_RS06305 PF00072 Response regulator receiver domain JM952_RS06310 PF00072 Response regulator receiver domain JM952_RS06310 PF01627 Hpt domain JM952_RS06310 PF17149 Periplasmic sensor domain found in signal transduction proteins JM952_RS06310 PF00672 HAMP domain JM952_RS06310 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS06315 PF01627 Hpt domain JM952_RS06315 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS06315 PF00672 HAMP domain JM952_RS06315 PF17149 Periplasmic sensor domain found in signal transduction proteins JM952_RS06315 PF00072 Response regulator receiver domain JM952_RS06320 PF07690 Major Facilitator Superfamily JM952_RS06330 PF01208 Uroporphyrinogen decarboxylase (URO-D) JM952_RS06340 PF01761 3-dehydroquinate synthase JM952_RS06345 PF01202 Shikimate kinase JM952_RS06350 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JM952_RS06350 PF01243 Pyridoxamine 5'-phosphate oxidase JM952_RS06360 PF04012 PspA/IM30 family JM952_RS06385 PF03738 Glutathionylspermidine synthase preATP-grasp JM952_RS06395 PF07690 Major Facilitator Superfamily JM952_RS06400 PF00376 MerR family regulatory protein JM952_RS06400 PF09278 MerR, DNA binding JM952_RS06425 PF04820 Tryptophan halogenase JM952_RS06445 PF01339 CheB methylesterase JM952_RS06445 PF00072 Response regulator receiver domain JM952_RS06455 PF00324 Amino acid permease JM952_RS06460 PF00196 Bacterial regulatory proteins, luxR family JM952_RS06465 PF00561 alpha/beta hydrolase fold JM952_RS06480 PF00544 Pectate lyase JM952_RS06485 PF00324 Amino acid permease JM952_RS06490 PF01654 Cytochrome bd terminal oxidase subunit I JM952_RS06495 PF02322 Cytochrome bd terminal oxidase subunit II JM952_RS06505 PF01769 Divalent cation transporter JM952_RS06505 PF03448 MgtE intracellular N domain JM952_RS06505 PF00571 CBS domain JM952_RS06510 PF02896 PEP-utilising enzyme, TIM barrel domain JM952_RS06510 PF00391 PEP-utilising enzyme, mobile domain JM952_RS06510 PF05524 PEP-utilising enzyme, N-terminal JM952_RS06515 PF00381 PTS HPr component phosphorylation site JM952_RS06525 PF03668 P-loop ATPase protein family JM952_RS06530 PF02603 HPr Serine kinase N terminus JM952_RS06530 PF07475 HPr Serine kinase C-terminal domain JM952_RS06535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JM952_RS06540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JM952_RS06545 PF00309 Sigma-54 factor, Activator interacting domain (AID) JM952_RS06545 PF04963 Sigma-54 factor, core binding domain JM952_RS06545 PF04552 Sigma-54, DNA binding domain JM952_RS06550 PF00005 ABC transporter JM952_RS06570 PF01380 SIS domain JM952_RS06570 PF00571 CBS domain JM952_RS06575 PF01722 BolA-like protein JM952_RS06580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JM952_RS06600 PF00551 Formyl transferase JM952_RS06610 PF00586 AIR synthase related protein, N-terminal domain JM952_RS06610 PF02769 AIR synthase related protein, C-terminal domain JM952_RS06620 PF01594 AI-2E family transporter JM952_RS06625 PF00308 Bacterial dnaA protein JM952_RS06630 PF00483 Nucleotidyl transferase JM952_RS06635 PF01636 Phosphotransferase enzyme family JM952_RS06645 PF07687 Peptidase dimerisation domain JM952_RS06645 PF01546 Peptidase family M20/M25/M40 JM952_RS06660 PF00667 FAD binding domain JM952_RS06660 PF00258 Flavodoxin JM952_RS06660 PF00175 Oxidoreductase NAD-binding domain JM952_RS06665 PF02424 ApbE family JM952_RS06690 PF18331 PKHD-type hydroxylase C-terminal domain JM952_RS06690 PF13640 2OG-Fe(II) oxygenase superfamily JM952_RS06695 PF00593 TonB dependent receptor JM952_RS06695 PF07715 TonB-dependent Receptor Plug Domain JM952_RS06700 PF00355 Rieske [2Fe-2S] domain JM952_RS06710 PF00266 Aminotransferase class-V JM952_RS06715 PF01458 Uncharacterized protein family (UPF0051) JM952_RS06720 PF00005 ABC transporter JM952_RS06725 PF01458 Uncharacterized protein family (UPF0051) JM952_RS06740 PF01965 DJ-1/PfpI family JM952_RS06770 PF03807 NADP oxidoreductase coenzyme F420-dependent JM952_RS06770 PF14748 Pyrroline-5-carboxylate reductase dimerisation JM952_RS06775 PF01168 Alanine racemase, N-terminal domain JM952_RS06780 PF00437 Type II/IV secretion system protein JM952_RS06785 PF00437 Type II/IV secretion system protein JM952_RS06805 PF13302 Acetyltransferase (GNAT) domain JM952_RS06805 PF03352 Methyladenine glycosylase JM952_RS06805 PF00117 Glutamine amidotransferase class-I JM952_RS06805 PF00958 GMP synthase C terminal domain JM952_RS06805 PF13673 Acetyltransferase (GNAT) domain JM952_RS06810 PF13687 Domain of unknown function (DUF4153) JM952_RS06815 PF02622 Uncharacterized ACR, COG1678 JM952_RS06820 PF03652 Holliday junction resolvase JM952_RS06825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JM952_RS06825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JM952_RS06830 PF02566 OsmC-like protein JM952_RS06840 PF02567 Phenazine biosynthesis-like protein JM952_RS06845 PF02567 Phenazine biosynthesis-like protein JM952_RS06850 PF00696 Amino acid kinase family JM952_RS06850 PF01842 ACT domain JM952_RS06865 PF08245 Mur ligase middle domain JM952_RS06875 PF00348 Polyprenyl synthetase JM952_RS06880 PF00436 Single-strand binding protein family JM952_RS06890 PF06629 MltA-interacting protein MipA JM952_RS06900 PF00486 Transcriptional regulatory protein, C terminal JM952_RS06900 PF00072 Response regulator receiver domain JM952_RS06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS06905 PF00360 Phytochrome region JM952_RS06905 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS06905 PF08446 PAS fold JM952_RS06905 PF01590 GAF domain JM952_RS06910 PF01590 GAF domain JM952_RS06910 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS06910 PF00360 Phytochrome region JM952_RS06910 PF00563 EAL domain JM952_RS06915 PF00107 Zinc-binding dehydrogenase JM952_RS06915 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS06920 PF01799 [2Fe-2S] binding domain JM952_RS06920 PF00111 2Fe-2S iron-sulfur cluster binding domain JM952_RS06920 PF10518 TAT (twin-arginine translocation) pathway signal sequence JM952_RS06925 PF00941 FAD binding domain in molybdopterin dehydrogenase JM952_RS06925 PF03450 CO dehydrogenase flavoprotein C-terminal domain JM952_RS06930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JM952_RS06930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JM952_RS06935 PF13478 XdhC Rossmann domain JM952_RS06935 PF02625 XdhC and CoxI family JM952_RS06940 PF12804 MobA-like NTP transferase domain JM952_RS06970 PF04328 Selenoprotein, putative JM952_RS06975 PF13722 5TM C-terminal transporter carbon starvation CstA JM952_RS06975 PF02554 Carbon starvation protein CstA JM952_RS06980 PF05726 Pirin C-terminal cupin domain JM952_RS06980 PF02678 Pirin JM952_RS07000 PF02678 Pirin JM952_RS07000 PF05726 Pirin C-terminal cupin domain JM952_RS07005 PF04493 Endonuclease V JM952_RS07010 PF00300 Histidine phosphatase superfamily (branch 1) JM952_RS07020 PF01431 Peptidase family M13 JM952_RS07020 PF05649 Peptidase family M13 JM952_RS07025 PF13091 PLD-like domain JM952_RS07030 PF01339 CheB methylesterase JM952_RS07030 PF00072 Response regulator receiver domain JM952_RS07035 PF01739 CheR methyltransferase, SAM binding domain JM952_RS07035 PF03705 CheR methyltransferase, all-alpha domain JM952_RS07040 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS07040 PF03707 Bacterial signalling protein N terminal repeat JM952_RS07040 PF00563 EAL domain JM952_RS07045 PF01584 CheW-like domain JM952_RS07050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS07050 PF00672 HAMP domain JM952_RS07055 PF01584 CheW-like domain JM952_RS07055 PF02895 Signal transducing histidine kinase, homodimeric domain JM952_RS07055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS07055 PF09078 CheY binding JM952_RS07055 PF01627 Hpt domain JM952_RS07065 PF02559 CarD-like/TRCF domain JM952_RS07065 PF00270 DEAD/DEAH box helicase JM952_RS07065 PF17757 UvrB interaction domain JM952_RS07065 PF03461 TRCF domain JM952_RS07065 PF00271 Helicase conserved C-terminal domain JM952_RS07080 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JM952_RS07085 PF00072 Response regulator receiver domain JM952_RS07085 PF00486 Transcriptional regulatory protein, C terminal JM952_RS07090 PF00672 HAMP domain JM952_RS07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS07090 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS07095 PF06123 Inner membrane protein CreD JM952_RS07125 PF00749 tRNA synthetases class I (E and Q), catalytic domain JM952_RS07130 PF01475 Ferric uptake regulator family JM952_RS07140 PF00529 HlyD membrane-fusion protein of T1SS JM952_RS07140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS07145 PF00873 AcrB/AcrD/AcrF family JM952_RS07150 PF02321 Outer membrane efflux protein JM952_RS07155 PF16859 Tetracyclin repressor-like, C-terminal domain JM952_RS07155 PF00440 Bacterial regulatory proteins, tetR family JM952_RS07160 PF00248 Aldo/keto reductase family JM952_RS07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS07165 PF03466 LysR substrate binding domain JM952_RS07175 PF12833 Helix-turn-helix domain JM952_RS07175 PF06719 AraC-type transcriptional regulator N-terminus JM952_RS07190 PF01483 Proprotein convertase P-domain JM952_RS07190 PF00082 Subtilase family JM952_RS07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS07195 PF03466 LysR substrate binding domain JM952_RS07200 PF07690 Major Facilitator Superfamily JM952_RS07235 PF12838 4Fe-4S dicluster domain JM952_RS07235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JM952_RS07235 PF00384 Molybdopterin oxidoreductase JM952_RS07235 PF01568 Molydopterin dinucleotide binding domain JM952_RS07235 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JM952_RS07245 PF01654 Cytochrome bd terminal oxidase subunit I JM952_RS07250 PF02322 Cytochrome bd terminal oxidase subunit II JM952_RS07265 PF07715 TonB-dependent Receptor Plug Domain JM952_RS07265 PF00593 TonB dependent receptor JM952_RS07280 PF00654 Voltage gated chloride channel JM952_RS07290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JM952_RS07290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JM952_RS07320 PF01494 FAD binding domain JM952_RS07345 PF03880 DbpA RNA binding domain JM952_RS07345 PF00270 DEAD/DEAH box helicase JM952_RS07345 PF00271 Helicase conserved C-terminal domain JM952_RS07350 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS07350 PF08448 PAS fold JM952_RS07350 PF00563 EAL domain JM952_RS07355 PF00849 RNA pseudouridylate synthase JM952_RS07355 PF01479 S4 domain JM952_RS07370 PF03737 Aldolase/RraA JM952_RS07375 PF00144 Beta-lactamase JM952_RS07380 PF00999 Sodium/hydrogen exchanger family JM952_RS07385 PF00005 ABC transporter JM952_RS07385 PF00664 ABC transporter transmembrane region JM952_RS07420 PF01022 Bacterial regulatory protein, arsR family JM952_RS07425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS07425 PF03466 LysR substrate binding domain JM952_RS07440 PF04070 Domain of unknown function (DUF378) JM952_RS07450 PF00085 Thioredoxin JM952_RS07460 PF13603 Leucyl-tRNA synthetase, Domain 2 JM952_RS07460 PF00133 tRNA synthetases class I (I, L, M and V) JM952_RS07460 PF08264 Anticodon-binding domain of tRNA JM952_RS07475 PF01467 Cytidylyltransferase-like JM952_RS07490 PF02590 Predicted SPOUT methyltransferase JM952_RS07505 PF04402 Protein of unknown function (DUF541) JM952_RS07510 PF02545 Maf-like protein JM952_RS07515 PF10150 Ribonuclease E/G family JM952_RS07515 PF00575 S1 RNA binding domain JM952_RS07520 PF13502 AsmA-like C-terminal region JM952_RS07520 PF13116 Protein of unknown function JM952_RS07530 PF01523 Putative modulator of DNA gyrase JM952_RS07535 PF04751 Protein of unknown function (DUF615) JM952_RS07540 PF01523 Putative modulator of DNA gyrase JM952_RS07560 PF00348 Polyprenyl synthetase JM952_RS07565 PF02609 Exonuclease VII small subunit JM952_RS07570 PF01171 PP-loop family JM952_RS07570 PF09179 TilS substrate binding domain JM952_RS07570 PF11734 TilS substrate C-terminal domain JM952_RS07575 PF00245 Alkaline phosphatase JM952_RS07580 PF00375 Sodium:dicarboxylate symporter family JM952_RS07600 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS07605 PF00158 Sigma-54 interaction domain JM952_RS07605 PF02954 Bacterial regulatory protein, Fis family JM952_RS07605 PF00072 Response regulator receiver domain JM952_RS07630 PF00877 NlpC/P60 family JM952_RS07635 PF00877 NlpC/P60 family JM952_RS07640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JM952_RS07645 PF04235 Protein of unknown function (DUF418) JM952_RS07650 PF01266 FAD dependent oxidoreductase JM952_RS07655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM952_RS07655 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS07675 PF05649 Peptidase family M13 JM952_RS07675 PF01431 Peptidase family M13 JM952_RS07680 PF05649 Peptidase family M13 JM952_RS07680 PF01431 Peptidase family M13 JM952_RS07695 PF07715 TonB-dependent Receptor Plug Domain JM952_RS07695 PF00593 TonB dependent receptor JM952_RS07700 PF10609 NUBPL iron-transfer P-loop NTPase JM952_RS07705 PF00692 dUTPase JM952_RS07725 PF01738 Dienelactone hydrolase family JM952_RS07730 PF02661 Fic/DOC family JM952_RS07735 PF18693 TRAM domain JM952_RS07735 PF04055 Radical SAM superfamily JM952_RS07735 PF00919 Uncharacterized protein family UPF0004 JM952_RS07740 PF03449 Transcription elongation factor, N-terminal JM952_RS07740 PF01272 Transcription elongation factor, GreA/GreB, C-term JM952_RS07755 PF00293 NUDIX domain JM952_RS07765 PF05872 Bacterial protein of unknown function (DUF853) JM952_RS07780 PF02666 Phosphatidylserine decarboxylase JM952_RS07785 PF02630 SCO1/SenC JM952_RS07790 PF05175 Methyltransferase small domain JM952_RS07800 PF01264 Chorismate synthase JM952_RS07805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JM952_RS07805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JM952_RS07810 PF02774 Semialdehyde dehydrogenase, dimerisation domain JM952_RS07810 PF01118 Semialdehyde dehydrogenase, NAD binding domain JM952_RS07825 PF01416 tRNA pseudouridine synthase JM952_RS07830 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JM952_RS07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS07835 PF03466 LysR substrate binding domain JM952_RS07840 PF00291 Pyridoxal-phosphate dependent enzyme JM952_RS07850 PF00290 Tryptophan synthase alpha chain JM952_RS07855 PF01039 Carboxyl transferase domain JM952_RS07855 PF17848 Acetyl-coA carboxylase zinc finger domain JM952_RS07860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JM952_RS07860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JM952_RS07860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JM952_RS07860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JM952_RS07875 PF03707 Bacterial signalling protein N terminal repeat JM952_RS07875 PF00563 EAL domain JM952_RS07875 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS07910 PF00106 short chain dehydrogenase JM952_RS07915 PF00121 Triosephosphate isomerase JM952_RS07930 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JM952_RS07935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JM952_RS07940 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JM952_RS07945 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JM952_RS07955 PF10531 SLBB domain JM952_RS07955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JM952_RS07955 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JM952_RS07960 PF00384 Molybdopterin oxidoreductase JM952_RS07960 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JM952_RS07960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JM952_RS07965 PF00146 NADH dehydrogenase JM952_RS07970 PF12838 4Fe-4S dicluster domain JM952_RS07975 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JM952_RS07980 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JM952_RS07985 PF00361 Proton-conducting membrane transporter JM952_RS07985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JM952_RS07990 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus JM952_RS07990 PF00361 Proton-conducting membrane transporter JM952_RS07995 PF00361 Proton-conducting membrane transporter JM952_RS08005 PF02576 RimP N-terminal domain JM952_RS08005 PF17384 RimP C-terminal SH3 domain JM952_RS08010 PF13184 NusA-like KH domain JM952_RS08010 PF08529 NusA N-terminal domain JM952_RS08010 PF00575 S1 RNA binding domain JM952_RS08015 PF00009 Elongation factor Tu GTP binding domain JM952_RS08015 PF11987 Translation-initiation factor 2 JM952_RS08015 PF08364 Bacterial translation initiation factor IF-2 associated region JM952_RS08015 PF04760 Translation initiation factor IF-2, N-terminal region JM952_RS08020 PF02033 Ribosome-binding factor A JM952_RS08025 PF09157 Pseudouridine synthase II TruB, C-terminal JM952_RS08025 PF16198 tRNA pseudouridylate synthase B C-terminal domain JM952_RS08025 PF01509 TruB family pseudouridylate synthase (N terminal domain) JM952_RS08030 PF00312 Ribosomal protein S15 JM952_RS08035 PF03725 3' exoribonuclease family, domain 2 JM952_RS08035 PF00575 S1 RNA binding domain JM952_RS08035 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JM952_RS08035 PF00013 KH domain JM952_RS08035 PF01138 3' exoribonuclease family, domain 1 JM952_RS08045 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JM952_RS08045 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JM952_RS08055 PF00731 AIR carboxylase JM952_RS08060 PF02222 ATP-grasp domain JM952_RS08060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JM952_RS08065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JM952_RS08065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JM952_RS08070 PF00462 Glutaredoxin JM952_RS08080 PF01914 MarC family integral membrane protein JM952_RS08085 PF00593 TonB dependent receptor JM952_RS08090 PF11892 Domain of unknown function (DUF3412) JM952_RS08090 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JM952_RS08090 PF03641 Possible lysine decarboxylase JM952_RS08095 PF07694 5TMR of 5TMR-LYT JM952_RS08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS08095 PF06580 Histidine kinase JM952_RS08120 PF05567 Neisseria PilC beta-propeller domain JM952_RS08125 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JM952_RS08125 PF07963 Prokaryotic N-terminal methylation motif JM952_RS08135 PF00114 Pilin (bacterial filament) JM952_RS08135 PF07963 Prokaryotic N-terminal methylation motif JM952_RS08140 PF02151 UvrB/uvrC motif JM952_RS08140 PF12344 Ultra-violet resistance protein B JM952_RS08140 PF17757 UvrB interaction domain JM952_RS08140 PF00271 Helicase conserved C-terminal domain JM952_RS08140 PF04851 Type III restriction enzyme, res subunit JM952_RS08155 PF02534 Type IV secretory system Conjugative DNA transfer JM952_RS08175 PF03743 Bacterial conjugation TrbI-like protein JM952_RS08180 PF00437 Type II/IV secretion system protein JM952_RS08185 PF01464 Transglycosylase SLT domain JM952_RS08195 PF05101 Type IV secretory pathway, VirB3-like protein JM952_RS08200 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JM952_RS08225 PF01471 Putative peptidoglycan binding domain JM952_RS08225 PF04717 Type VI secretion system, phage-baseplate injector JM952_RS08270 PF00128 Alpha amylase, catalytic domain JM952_RS08285 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation JM952_RS08285 PF14508 Glycosyl-hydrolase 97 N-terminal JM952_RS08285 PF10566 Glycoside hydrolase 97 JM952_RS08295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JM952_RS08300 PF00686 Starch binding domain JM952_RS08300 PF00128 Alpha amylase, catalytic domain JM952_RS08305 PF00356 Bacterial regulatory proteins, lacI family JM952_RS08310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM952_RS08310 PF03129 Anticodon binding domain JM952_RS08310 PF02824 TGS domain JM952_RS08310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JM952_RS08315 PF05198 Translation initiation factor IF-3, N-terminal domain JM952_RS08315 PF00707 Translation initiation factor IF-3, C-terminal domain JM952_RS08320 PF01632 Ribosomal protein L35 JM952_RS08325 PF00453 Ribosomal protein L20 JM952_RS08330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JM952_RS08330 PF01409 tRNA synthetases class II core domain (F) JM952_RS08335 PF03483 B3/4 domain JM952_RS08335 PF03484 tRNA synthetase B5 domain JM952_RS08335 PF03147 Ferredoxin-fold anticodon binding domain JM952_RS08335 PF01588 Putative tRNA binding domain JM952_RS08335 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JM952_RS08340 PF00216 Bacterial DNA-binding protein JM952_RS08345 PF13411 MerR HTH family regulatory protein JM952_RS08365 PF02397 Bacterial sugar transferase JM952_RS08385 PF00534 Glycosyl transferases group 1 JM952_RS08385 PF13439 Glycosyltransferase Family 4 JM952_RS08395 PF01943 Polysaccharide biosynthesis protein JM952_RS08410 PF03808 Glycosyl transferase WecB/TagA/CpsF family JM952_RS08425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JM952_RS08425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JM952_RS08435 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JM952_RS08455 PF02780 Transketolase, C-terminal domain JM952_RS08455 PF02779 Transketolase, pyrimidine binding domain JM952_RS08455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JM952_RS08465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM952_RS08465 PF12806 Acetyl-CoA dehydrogenase C-terminal like JM952_RS08465 PF02770 Acyl-CoA dehydrogenase, middle domain JM952_RS08465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM952_RS08495 PF13188 PAS domain JM952_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS08495 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS08495 PF08448 PAS fold JM952_RS08495 PF00072 Response regulator receiver domain JM952_RS08520 PF00072 Response regulator receiver domain JM952_RS08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS08520 PF13426 PAS domain JM952_RS08530 PF04362 Bacterial Fe(2+) trafficking JM952_RS08535 PF00633 Helix-hairpin-helix motif JM952_RS08535 PF00730 HhH-GPD superfamily base excision DNA repair protein JM952_RS08535 PF14815 NUDIX domain JM952_RS08540 PF00448 SRP54-type protein, GTPase domain JM952_RS08540 PF02881 SRP54-type protein, helical bundle domain JM952_RS08550 PF05544 Proline racemase JM952_RS08555 PF01266 FAD dependent oxidoreductase JM952_RS08565 PF04324 BFD-like [2Fe-2S] binding domain JM952_RS08565 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS08570 PF00701 Dihydrodipicolinate synthetase family JM952_RS08575 PF00171 Aldehyde dehydrogenase family JM952_RS08580 PF00557 Metallopeptidase family M24 JM952_RS08580 PF01321 Creatinase/Prolidase N-terminal domain JM952_RS08605 PF13520 Amino acid permease JM952_RS08640 PF07715 TonB-dependent Receptor Plug Domain JM952_RS08640 PF00593 TonB dependent receptor JM952_RS08645 PF07532 Bacterial Ig-like domain (group 4) JM952_RS08650 PF04616 Glycosyl hydrolases family 43 JM952_RS08655 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JM952_RS08655 PF00326 Prolyl oligopeptidase family JM952_RS08665 PF07715 TonB-dependent Receptor Plug Domain JM952_RS08665 PF00593 TonB dependent receptor JM952_RS08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS08710 PF00183 Hsp90 protein JM952_RS08720 PF01467 Cytidylyltransferase-like JM952_RS08730 PF00037 4Fe-4S binding domain JM952_RS08740 PF00759 Glycosyl hydrolase family 9 JM952_RS08740 PF02927 Cellulase N-terminal ig-like domain JM952_RS08770 PF00202 Aminotransferase class-III JM952_RS08780 PF02547 Queuosine biosynthesis protein JM952_RS08785 PF01702 Queuine tRNA-ribosyltransferase JM952_RS08790 PF02699 Preprotein translocase subunit JM952_RS08795 PF02355 Protein export membrane protein JM952_RS08795 PF07549 SecD/SecF GG Motif JM952_RS08795 PF13721 SecD export protein N-terminal TM region JM952_RS08800 PF07549 SecD/SecF GG Motif JM952_RS08800 PF02355 Protein export membrane protein JM952_RS08815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JM952_RS08820 PF00294 pfkB family carbohydrate kinase JM952_RS08825 PF00391 PEP-utilising enzyme, mobile domain JM952_RS08825 PF05524 PEP-utilising enzyme, N-terminal JM952_RS08825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JM952_RS08825 PF00381 PTS HPr component phosphorylation site JM952_RS08825 PF02896 PEP-utilising enzyme, TIM barrel domain JM952_RS08830 PF00356 Bacterial regulatory proteins, lacI family JM952_RS08835 PF00873 AcrB/AcrD/AcrF family JM952_RS08840 PF00529 HlyD membrane-fusion protein of T1SS JM952_RS08840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS08850 PF05088 Bacterial NAD-glutamate dehydrogenase JM952_RS08855 PF12833 Helix-turn-helix domain JM952_RS08860 PF00857 Isochorismatase family JM952_RS08865 PF07690 Major Facilitator Superfamily JM952_RS08870 PF00072 Response regulator receiver domain JM952_RS08875 PF01627 Hpt domain JM952_RS08875 PF00672 HAMP domain JM952_RS08875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JM952_RS08875 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS08875 PF00072 Response regulator receiver domain JM952_RS08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS08880 PF04286 Protein of unknown function (DUF445) JM952_RS08890 PF00202 Aminotransferase class-III JM952_RS08895 PF07690 Major Facilitator Superfamily JM952_RS08900 PF02634 FdhD/NarQ family JM952_RS08905 PF00384 Molybdopterin oxidoreductase JM952_RS08915 PF07690 Major Facilitator Superfamily JM952_RS08915 PF00083 Sugar (and other) transporter JM952_RS08920 PF01814 Hemerythrin HHE cation binding domain JM952_RS08925 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS08925 PF00072 Response regulator receiver domain JM952_RS08930 PF01266 FAD dependent oxidoreductase JM952_RS08935 PF00120 Glutamine synthetase, catalytic domain JM952_RS08940 PF07722 Peptidase C26 JM952_RS08945 PF00120 Glutamine synthetase, catalytic domain JM952_RS08950 PF00202 Aminotransferase class-III JM952_RS08955 PF13416 Bacterial extracellular solute-binding protein JM952_RS08960 PF13533 Biotin-lipoyl like JM952_RS08965 PF07690 Major Facilitator Superfamily JM952_RS08970 PF02321 Outer membrane efflux protein JM952_RS08975 PF00005 ABC transporter JM952_RS08975 PF08402 TOBE domain JM952_RS08985 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS09000 PF00171 Aldehyde dehydrogenase family JM952_RS09015 PF03471 Transporter associated domain JM952_RS09015 PF00571 CBS domain JM952_RS09025 PF02130 Uncharacterized protein family UPF0054 JM952_RS09035 PF02562 PhoH-like protein JM952_RS09040 PF00919 Uncharacterized protein family UPF0004 JM952_RS09040 PF01938 TRAM domain JM952_RS09040 PF04055 Radical SAM superfamily JM952_RS09045 PF02798 Glutathione S-transferase, N-terminal domain JM952_RS09045 PF14497 Glutathione S-transferase, C-terminal domain JM952_RS09055 PF01464 Transglycosylase SLT domain JM952_RS09060 PF00355 Rieske [2Fe-2S] domain JM952_RS09060 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JM952_RS09065 PF00032 Cytochrome b(C-terminal)/b6/petD JM952_RS09065 PF00033 Cytochrome b/b6/petB JM952_RS09070 PF02167 Cytochrome C1 family JM952_RS09075 PF00043 Glutathione S-transferase, C-terminal domain JM952_RS09075 PF02798 Glutathione S-transferase, N-terminal domain JM952_RS09080 PF04386 Stringent starvation protein B JM952_RS09095 PF00270 DEAD/DEAH box helicase JM952_RS09095 PF08494 DEAD/H associated JM952_RS09095 PF00271 Helicase conserved C-terminal domain JM952_RS09100 PF02245 Methylpurine-DNA glycosylase (MPG) JM952_RS09105 PF00672 HAMP domain JM952_RS09105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS09105 PF02203 Tar ligand binding domain homologue JM952_RS09110 PF01584 CheW-like domain JM952_RS09140 PF01381 Helix-turn-helix JM952_RS09155 PF13356 Arm DNA-binding domain JM952_RS09155 PF00589 Phage integrase family JM952_RS09175 PF04679 ATP dependent DNA ligase C terminal region JM952_RS09175 PF13298 DNA polymerase Ligase (LigD) JM952_RS09175 PF01068 ATP dependent DNA ligase domain JM952_RS09180 PF01612 3'-5' exonuclease JM952_RS09180 PF00570 HRDC domain JM952_RS09185 PF03781 Sulfatase-modifying factor enzyme 1 JM952_RS09195 PF02601 Exonuclease VII, large subunit JM952_RS09195 PF13742 OB-fold nucleic acid binding domain JM952_RS09200 PF08331 Domain of unknown function (DUF1730) JM952_RS09205 PF01256 Carbohydrate kinase JM952_RS09205 PF03853 YjeF-related protein N-terminus JM952_RS09215 PF01520 N-acetylmuramoyl-L-alanine amidase JM952_RS09215 PF11741 AMIN domain JM952_RS09220 PF01119 DNA mismatch repair protein, C-terminal domain JM952_RS09220 PF08676 MutL C terminal dimerisation domain JM952_RS09235 PF05233 PHB accumulation regulatory domain JM952_RS09235 PF07879 PHB/PHA accumulation regulator DNA-binding domain JM952_RS09240 PF00106 short chain dehydrogenase JM952_RS09245 PF00749 tRNA synthetases class I (E and Q), catalytic domain JM952_RS09250 PF01435 Peptidase family M48 JM952_RS09255 PF03707 Bacterial signalling protein N terminal repeat JM952_RS09255 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS09255 PF00563 EAL domain JM952_RS09265 PF07152 YaeQ protein JM952_RS09270 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JM952_RS09275 PF00313 'Cold-shock' DNA-binding domain JM952_RS09285 PF07859 alpha/beta hydrolase fold JM952_RS09290 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JM952_RS09295 PF00156 Phosphoribosyl transferase domain JM952_RS09300 PF03880 DbpA RNA binding domain JM952_RS09300 PF00270 DEAD/DEAH box helicase JM952_RS09300 PF00271 Helicase conserved C-terminal domain JM952_RS09305 PF12848 ABC transporter JM952_RS09305 PF00005 ABC transporter JM952_RS09305 PF16326 ABC transporter C-terminal domain JM952_RS09315 PF00545 ribonuclease JM952_RS09320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JM952_RS09320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JM952_RS09325 PF00459 Inositol monophosphatase family JM952_RS09330 PF00588 SpoU rRNA Methylase family JM952_RS09340 PF00563 EAL domain JM952_RS09340 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS09340 PF03707 Bacterial signalling protein N terminal repeat JM952_RS09340 PF13188 PAS domain JM952_RS09345 PF04055 Radical SAM superfamily JM952_RS09350 PF08207 Elongation factor P (EF-P) KOW-like domain JM952_RS09350 PF01132 Elongation factor P (EF-P) OB domain JM952_RS09350 PF09285 Elongation factor P, C-terminal JM952_RS09360 PF01979 Amidohydrolase family JM952_RS09370 PF13419 Haloacid dehalogenase-like hydrolase JM952_RS09380 PF00295 Glycosyl hydrolases family 28 JM952_RS09400 PF00753 Metallo-beta-lactamase superfamily JM952_RS09410 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JM952_RS09415 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JM952_RS09425 PF01551 Peptidase family M23 JM952_RS09425 PF08460 Bacterial SH3 domain JM952_RS09430 PF01979 Amidohydrolase family JM952_RS09435 PF01809 Putative membrane protein insertion efficiency factor JM952_RS09440 PF01258 Prokaryotic dksA/traR C4-type zinc finger JM952_RS09455 PF07690 Major Facilitator Superfamily JM952_RS09460 PF02657 Fe-S metabolism associated domain JM952_RS09465 PF01406 tRNA synthetases class I (C) catalytic domain JM952_RS09465 PF09190 DALR domain JM952_RS09475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JM952_RS09475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JM952_RS09485 PF00764 Arginosuccinate synthase JM952_RS09490 PF01546 Peptidase family M20/M25/M40 JM952_RS09490 PF07687 Peptidase dimerisation domain JM952_RS09495 PF00696 Amino acid kinase family JM952_RS09495 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase JM952_RS09505 PF01118 Semialdehyde dehydrogenase, NAD binding domain JM952_RS09510 PF00206 Lyase JM952_RS09525 PF00696 Amino acid kinase family JM952_RS09525 PF01472 PUA domain JM952_RS09530 PF00171 Aldehyde dehydrogenase family JM952_RS09540 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JM952_RS09540 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JM952_RS09560 PF02322 Cytochrome bd terminal oxidase subunit II JM952_RS09565 PF01654 Cytochrome bd terminal oxidase subunit I JM952_RS09570 PF00005 ABC transporter JM952_RS09570 PF00664 ABC transporter transmembrane region JM952_RS09575 PF00005 ABC transporter JM952_RS09575 PF00664 ABC transporter transmembrane region JM952_RS09585 PF00561 alpha/beta hydrolase fold JM952_RS09600 PF03918 Cytochrome C biogenesis protein JM952_RS09605 PF08534 Redoxin JM952_RS09610 PF01578 Cytochrome C assembly protein JM952_RS09610 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JM952_RS09615 PF03100 CcmE JM952_RS09625 PF01578 Cytochrome C assembly protein JM952_RS09630 PF03379 CcmB protein JM952_RS09635 PF00005 ABC transporter JM952_RS09640 PF00155 Aminotransferase class I and II JM952_RS09645 PF00795 Carbon-nitrogen hydrolase JM952_RS09660 PF01479 S4 domain JM952_RS09660 PF00849 RNA pseudouridylate synthase JM952_RS09665 PF04079 Segregation and condensation complex subunit ScpB JM952_RS09670 PF02616 Segregation and condensation protein ScpA JM952_RS09675 PF03795 YCII-related domain JM952_RS09685 PF00356 Bacterial regulatory proteins, lacI family JM952_RS09700 PF13416 Bacterial extracellular solute-binding protein JM952_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS09710 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS09735 PF00795 Carbon-nitrogen hydrolase JM952_RS09740 PF04371 Porphyromonas-type peptidyl-arginine deiminase JM952_RS09750 PF00444 Ribosomal protein L36 JM952_RS09755 PF02224 Cytidylate kinase JM952_RS09760 PF00575 S1 RNA binding domain JM952_RS09765 PF00216 Bacterial DNA-binding protein JM952_RS09775 PF18073 Rubredoxin metal binding domain JM952_RS09780 PF00953 Glycosyl transferase family 4 JM952_RS09785 PF02719 Polysaccharide biosynthesis protein JM952_RS09790 PF00483 Nucleotidyl transferase JM952_RS09795 PF02254 TrkA-N domain JM952_RS09795 PF00999 Sodium/hydrogen exchanger family JM952_RS09805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JM952_RS09805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JM952_RS09810 PF00571 CBS domain JM952_RS09810 PF00478 IMP dehydrogenase / GMP reductase domain JM952_RS09820 PF00958 GMP synthase C terminal domain JM952_RS09820 PF02540 NAD synthase JM952_RS09820 PF00117 Glutamine amidotransferase class-I JM952_RS09835 PF00196 Bacterial regulatory proteins, luxR family JM952_RS09835 PF00072 Response regulator receiver domain JM952_RS09840 PF13185 GAF domain JM952_RS09840 PF13492 GAF domain JM952_RS09840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS09840 PF07730 Histidine kinase JM952_RS09850 PF00857 Isochorismatase family JM952_RS09860 PF07969 Amidohydrolase family JM952_RS09865 PF05977 Transmembrane secretion effector JM952_RS09875 PF00561 alpha/beta hydrolase fold JM952_RS09880 PF01566 Natural resistance-associated macrophage protein JM952_RS09885 PF02742 Iron dependent repressor, metal binding and dimerisation domain JM952_RS09885 PF01325 Iron dependent repressor, N-terminal DNA binding domain JM952_RS09890 PF14437 MafB19-like deaminase JM952_RS09895 PF00929 Exonuclease JM952_RS09900 PF00924 Mechanosensitive ion channel JM952_RS09900 PF05552 Conserved TM helix JM952_RS09905 PF00391 PEP-utilising enzyme, mobile domain JM952_RS09905 PF02896 PEP-utilising enzyme, TIM barrel domain JM952_RS09905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JM952_RS09910 PF03618 Kinase/pyrophosphorylase JM952_RS09930 PF01066 CDP-alcohol phosphatidyltransferase JM952_RS09940 PF00561 alpha/beta hydrolase fold JM952_RS09955 PF01266 FAD dependent oxidoreductase JM952_RS09955 PF00355 Rieske [2Fe-2S] domain JM952_RS09965 PF16921 Tex protein YqgF-like domain JM952_RS09965 PF09371 Tex-like protein N-terminal domain JM952_RS09965 PF00575 S1 RNA binding domain JM952_RS09965 PF17674 HHH domain JM952_RS09970 PF08447 PAS fold JM952_RS09970 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS09970 PF08448 PAS fold JM952_RS09970 PF00563 EAL domain JM952_RS10010 PF00034 Cytochrome c JM952_RS10020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS10025 PF00873 AcrB/AcrD/AcrF family JM952_RS10030 PF00873 AcrB/AcrD/AcrF family JM952_RS10035 PF01081 KDPG and KHG aldolase JM952_RS10040 PF00920 Dehydratase family JM952_RS10045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JM952_RS10050 PF02685 Glucokinase JM952_RS10055 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JM952_RS10055 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JM952_RS10060 PF00005 ABC transporter JM952_RS10060 PF17912 MalK OB fold domain JM952_RS10065 PF01571 Aminomethyltransferase folate-binding domain JM952_RS10075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JM952_RS10080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JM952_RS10085 PF02910 Fumarate reductase flavoprotein C-term JM952_RS10085 PF00890 FAD binding domain JM952_RS10095 PF13085 2Fe-2S iron-sulfur cluster binding domain JM952_RS10100 PF03937 Flavinator of succinate dehydrogenase JM952_RS10110 PF02687 FtsX-like permease family JM952_RS10110 PF12704 MacB-like periplasmic core domain JM952_RS10115 PF00005 ABC transporter JM952_RS10125 PF03772 Competence protein JM952_RS10125 PF00753 Metallo-beta-lactamase superfamily JM952_RS10130 PF01618 MotA/TolQ/ExbB proton channel family JM952_RS10140 PF00664 ABC transporter transmembrane region JM952_RS10140 PF00005 ABC transporter JM952_RS10145 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JM952_RS10150 PF02348 Cytidylyltransferase JM952_RS10155 PF01451 Low molecular weight phosphotyrosine protein phosphatase JM952_RS10165 PF02151 UvrB/uvrC motif JM952_RS10165 PF08459 UvrC Helix-hairpin-helix N-terminal JM952_RS10165 PF01541 GIY-YIG catalytic domain JM952_RS10170 PF01066 CDP-alcohol phosphatidyltransferase JM952_RS10190 PF00589 Phage integrase family JM952_RS10190 PF13356 Arm DNA-binding domain JM952_RS10205 PF05394 Avirulence protein JM952_RS10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS10250 PF03466 LysR substrate binding domain JM952_RS10335 PF04002 RadC-like JAB domain JM952_RS10430 PF00580 UvrD/REP helicase N-terminal domain JM952_RS10430 PF13361 UvrD-like helicase C-terminal domain JM952_RS10495 PF13406 Transglycosylase SLT domain JM952_RS10510 PF00202 Aminotransferase class-III JM952_RS10530 PF01131 DNA topoisomerase JM952_RS10530 PF01751 Toprim domain JM952_RS10535 PF00436 Single-strand binding protein family JM952_RS10570 PF13614 AAA domain JM952_RS10595 PF10544 T5orf172 domain JM952_RS10635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JM952_RS10635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JM952_RS10635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JM952_RS10645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JM952_RS10655 PF17773 UPF0176 acylphosphatase like domain JM952_RS10655 PF00581 Rhodanese-like domain JM952_RS10660 PF00072 Response regulator receiver domain JM952_RS10660 PF00196 Bacterial regulatory proteins, luxR family JM952_RS10665 PF13700 Domain of unknown function (DUF4158) JM952_RS10665 PF01526 Tn3 transposase DDE domain JM952_RS10685 PF02203 Tar ligand binding domain homologue JM952_RS10685 PF00672 HAMP domain JM952_RS10685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS10720 PF17091 Inovirus G7P protein JM952_RS10725 PF02303 Helix-destabilising protein JM952_RS10750 PF01106 NifU-like domain JM952_RS10755 PF01329 Pterin 4 alpha carbinolamine dehydratase JM952_RS10765 PF02535 ZIP Zinc transporter JM952_RS10770 PF01479 S4 domain JM952_RS10770 PF00849 RNA pseudouridylate synthase JM952_RS10775 PF00575 S1 RNA binding domain JM952_RS10775 PF10150 Ribonuclease E/G family JM952_RS10775 PF12111 Polyribonucleotide phosphorylase C terminal JM952_RS10780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS10780 PF00672 HAMP domain JM952_RS10780 PF02203 Tar ligand binding domain homologue JM952_RS10800 PF13700 Domain of unknown function (DUF4158) JM952_RS10800 PF01526 Tn3 transposase DDE domain JM952_RS10825 PF04397 LytTr DNA-binding domain JM952_RS10825 PF00072 Response regulator receiver domain JM952_RS10835 PF13188 PAS domain JM952_RS10835 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS10835 PF00072 Response regulator receiver domain JM952_RS10835 PF08448 PAS fold JM952_RS10840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS10840 PF00072 Response regulator receiver domain JM952_RS10840 PF13426 PAS domain JM952_RS10845 PF02203 Tar ligand binding domain homologue JM952_RS10845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS10845 PF00672 HAMP domain JM952_RS10885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS10885 PF00672 HAMP domain JM952_RS10885 PF02203 Tar ligand binding domain homologue JM952_RS10890 PF00593 TonB dependent receptor JM952_RS10890 PF07660 Secretin and TonB N terminus short domain JM952_RS10890 PF07715 TonB-dependent Receptor Plug Domain JM952_RS10895 PF09335 SNARE associated Golgi protein JM952_RS10925 PF01638 HxlR-like helix-turn-helix JM952_RS10940 PF02630 SCO1/SenC JM952_RS10955 PF05649 Peptidase family M13 JM952_RS10955 PF01431 Peptidase family M13 JM952_RS10970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM952_RS10975 PF07995 Glucose / Sorbosone dehydrogenase JM952_RS10985 PF01590 GAF domain JM952_RS10985 PF08446 PAS fold JM952_RS10985 PF00360 Phytochrome region JM952_RS10985 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS11015 PF03797 Autotransporter beta-domain JM952_RS11015 PF00082 Subtilase family JM952_RS11020 PF12951 Passenger-associated-transport-repeat JM952_RS11020 PF12951 Passenger-associated-transport-repeat JM952_RS11025 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS11025 PF08447 PAS fold JM952_RS11025 PF08448 PAS fold JM952_RS11025 PF00563 EAL domain JM952_RS11035 PF00072 Response regulator receiver domain JM952_RS11035 PF01339 CheB methylesterase JM952_RS11040 PF05974 Domain of unknown function (DUF892) JM952_RS11055 PF01266 FAD dependent oxidoreductase JM952_RS11065 PF00483 Nucleotidyl transferase JM952_RS11075 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JM952_RS11090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM952_RS11095 PF01568 Molydopterin dinucleotide binding domain JM952_RS11095 PF04324 BFD-like [2Fe-2S] binding domain JM952_RS11095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JM952_RS11095 PF00384 Molybdopterin oxidoreductase JM952_RS11100 PF11723 Homotrimeric ring hydroxylase JM952_RS11100 PF00355 Rieske [2Fe-2S] domain JM952_RS11105 PF18267 Rubredoxin NAD+ reductase C-terminal domain JM952_RS11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS11105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JM952_RS11105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JM952_RS11105 PF04324 BFD-like [2Fe-2S] binding domain JM952_RS11110 PF07690 Major Facilitator Superfamily JM952_RS11120 PF00072 Response regulator receiver domain JM952_RS11120 PF03861 ANTAR domain JM952_RS11125 PF10414 Sirohaem synthase dimerisation region JM952_RS11125 PF14824 Sirohaem biosynthesis protein central JM952_RS11125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM952_RS11135 PF12804 MobA-like NTP transferase domain JM952_RS11140 PF00994 Probable molybdopterin binding domain JM952_RS11140 PF03454 MoeA C-terminal region (domain IV) JM952_RS11140 PF03453 MoeA N-terminal region (domain I and II) JM952_RS11150 PF03372 Endonuclease/Exonuclease/phosphatase family JM952_RS11160 PF13823 Alcohol dehydrogenase GroES-associated JM952_RS11160 PF00107 Zinc-binding dehydrogenase JM952_RS11160 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS11175 PF00067 Cytochrome P450 JM952_RS11180 PF00106 short chain dehydrogenase JM952_RS11195 PF00899 ThiF family JM952_RS11200 PF00994 Probable molybdopterin binding domain JM952_RS11200 PF03454 MoeA C-terminal region (domain IV) JM952_RS11200 PF03453 MoeA N-terminal region (domain I and II) JM952_RS11205 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JM952_RS11205 PF01926 50S ribosome-binding GTPase JM952_RS11210 PF01011 PQQ enzyme repeat JM952_RS11210 PF13360 PQQ-like domain JM952_RS11220 PF13464 Domain of unknown function (DUF4115) JM952_RS11230 PF04055 Radical SAM superfamily JM952_RS11235 PF00334 Nucleoside diphosphate kinase JM952_RS11245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JM952_RS11245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JM952_RS11245 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS11250 PF02803 Thiolase, C-terminal domain JM952_RS11250 PF00108 Thiolase, N-terminal domain JM952_RS11255 PF00654 Voltage gated chloride channel JM952_RS11260 PF00004 ATPase family associated with various cellular activities (AAA) JM952_RS11260 PF16193 AAA C-terminal domain JM952_RS11260 PF12002 MgsA AAA+ ATPase C terminal JM952_RS11270 PF03548 Outer membrane lipoprotein carrier protein LolA JM952_RS11280 PF01580 FtsK/SpoIIIE family JM952_RS11280 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JM952_RS11280 PF17854 FtsK alpha domain JM952_RS11280 PF09397 Ftsk gamma domain JM952_RS11285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS11295 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JM952_RS11300 PF01176 Translation initiation factor 1A / IF-1 JM952_RS11305 PF00004 ATPase family associated with various cellular activities (AAA) JM952_RS11305 PF07724 AAA domain (Cdc48 subfamily) JM952_RS11305 PF17871 AAA lid domain JM952_RS11305 PF02861 Clp amino terminal domain, pathogenicity island component JM952_RS11305 PF10431 C-terminal, D2-small domain, of ClpB protein JM952_RS11310 PF02617 ATP-dependent Clp protease adaptor protein ClpS JM952_RS11315 PF00293 NUDIX domain JM952_RS11325 PF04356 Protein of unknown function (DUF489) JM952_RS11330 PF00672 HAMP domain JM952_RS11330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11330 PF12729 Four helix bundle sensory module for signal transduction JM952_RS11345 PF00563 EAL domain JM952_RS11345 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS11345 PF03707 Bacterial signalling protein N terminal repeat JM952_RS11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS11350 PF07730 Histidine kinase JM952_RS11355 PF03707 Bacterial signalling protein N terminal repeat JM952_RS11355 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS11355 PF00563 EAL domain JM952_RS11360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS11360 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS11380 PF00072 Response regulator receiver domain JM952_RS11380 PF01584 CheW-like domain JM952_RS11390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM952_RS11390 PF00460 Flagella basal body rod protein JM952_RS11395 PF03963 Flagellar hook capping protein - N-terminal region JM952_RS11400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM952_RS11400 PF00460 Flagella basal body rod protein JM952_RS11400 PF07559 Flagellar basal body protein FlaE JM952_RS11405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM952_RS11405 PF00460 Flagella basal body rod protein JM952_RS11410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM952_RS11410 PF00460 Flagella basal body rod protein JM952_RS11415 PF02107 Flagellar L-ring protein JM952_RS11420 PF02119 Flagellar P-ring protein JM952_RS11425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JM952_RS11425 PF10135 Rod binding protein JM952_RS11430 PF07196 Flagellin hook IN motif JM952_RS11430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JM952_RS11435 PF00669 Bacterial flagellin N-terminal helical region JM952_RS11440 PF00669 Bacterial flagellin N-terminal helical region JM952_RS11440 PF00700 Bacterial flagellin C-terminal helical region JM952_RS11445 PF02465 Flagellar hook-associated protein 2 N-terminus JM952_RS11445 PF07195 Flagellar hook-associated protein 2 C-terminus JM952_RS11445 PF07196 Flagellin hook IN motif JM952_RS11450 PF02561 Flagellar protein FliS JM952_RS11465 PF00072 Response regulator receiver domain JM952_RS11465 PF00196 Bacterial regulatory proteins, luxR family JM952_RS11470 PF04552 Sigma-54, DNA binding domain JM952_RS11470 PF00309 Sigma-54 factor, Activator interacting domain (AID) JM952_RS11470 PF04963 Sigma-54 factor, core binding domain JM952_RS11475 PF01339 CheB methylesterase JM952_RS11475 PF00072 Response regulator receiver domain JM952_RS11480 PF06490 Flagellar regulatory protein FleQ JM952_RS11480 PF02954 Bacterial regulatory protein, Fis family JM952_RS11480 PF00158 Sigma-54 interaction domain JM952_RS11485 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JM952_RS11505 PF00535 Glycosyl transferase family 2 JM952_RS11510 PF02049 Flagellar hook-basal body complex protein FliE JM952_RS11515 PF08345 Flagellar M-ring protein C-terminal JM952_RS11515 PF01514 Secretory protein of YscJ/FliF family JM952_RS11520 PF14842 FliG N-terminal domain JM952_RS11520 PF14841 FliG middle domain JM952_RS11520 PF01706 FliG C-terminal domain JM952_RS11530 PF18269 T3SS EscN ATPase C-terminal domain JM952_RS11530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM952_RS11550 PF02154 Flagellar motor switch protein FliM JM952_RS11550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JM952_RS11555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JM952_RS11560 PF04347 Flagellar biosynthesis protein, FliO JM952_RS11565 PF00813 FliP family JM952_RS11570 PF01313 Bacterial export proteins, family 3 JM952_RS11575 PF01311 Bacterial export proteins, family 1 JM952_RS11580 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS11585 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS11590 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS11590 PF00563 EAL domain JM952_RS11590 PF03707 Bacterial signalling protein N terminal repeat JM952_RS11595 PF01312 FlhB HrpN YscU SpaS Family JM952_RS11600 PF00771 FHIPEP family JM952_RS11605 PF00448 SRP54-type protein, GTPase domain JM952_RS11610 PF10609 NUBPL iron-transfer P-loop NTPase JM952_RS11615 PF04542 Sigma-70 region 2 JM952_RS11615 PF04545 Sigma-70, region 4 JM952_RS11615 PF04539 Sigma-70 region 3 JM952_RS11620 PF00072 Response regulator receiver domain JM952_RS11625 PF04344 Chemotaxis phosphatase, CheZ JM952_RS11630 PF00072 Response regulator receiver domain JM952_RS11630 PF01627 Hpt domain JM952_RS11630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS11630 PF02895 Signal transducing histidine kinase, homodimeric domain JM952_RS11630 PF01584 CheW-like domain JM952_RS11725 PF01618 MotA/TolQ/ExbB proton channel family JM952_RS11730 PF13677 Membrane MotB of proton-channel complex MotA/MotB JM952_RS11730 PF00691 OmpA family JM952_RS11735 PF13614 AAA domain JM952_RS11740 PF01584 CheW-like domain JM952_RS11750 PF00072 Response regulator receiver domain JM952_RS11755 PF01584 CheW-like domain JM952_RS11755 PF09078 CheY binding JM952_RS11755 PF01627 Hpt domain JM952_RS11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS11755 PF02895 Signal transducing histidine kinase, homodimeric domain JM952_RS11760 PF17202 Single cache domain 3 JM952_RS11760 PF00672 HAMP domain JM952_RS11760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11775 PF02203 Tar ligand binding domain homologue JM952_RS11775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11775 PF00672 HAMP domain JM952_RS11780 PF02203 Tar ligand binding domain homologue JM952_RS11780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11780 PF00672 HAMP domain JM952_RS11785 PF00672 HAMP domain JM952_RS11785 PF02203 Tar ligand binding domain homologue JM952_RS11785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11790 PF02203 Tar ligand binding domain homologue JM952_RS11790 PF00672 HAMP domain JM952_RS11795 PF02203 Tar ligand binding domain homologue JM952_RS11795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11795 PF00672 HAMP domain JM952_RS11800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11800 PF00672 HAMP domain JM952_RS11800 PF02203 Tar ligand binding domain homologue JM952_RS11815 PF02203 Tar ligand binding domain homologue JM952_RS11815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11815 PF00672 HAMP domain JM952_RS11820 PF07238 PilZ domain JM952_RS11820 PF07317 Flagellar regulator YcgR JM952_RS11825 PF01584 CheW-like domain JM952_RS11835 PF02203 Tar ligand binding domain homologue JM952_RS11835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS11835 PF00672 HAMP domain JM952_RS11840 PF03705 CheR methyltransferase, all-alpha domain JM952_RS11840 PF01739 CheR methyltransferase, SAM binding domain JM952_RS11845 PF03975 CheD chemotactic sensory transduction JM952_RS11850 PF00072 Response regulator receiver domain JM952_RS11850 PF01339 CheB methylesterase JM952_RS11855 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS11855 PF00563 EAL domain JM952_RS11855 PF03707 Bacterial signalling protein N terminal repeat JM952_RS11860 PF00561 alpha/beta hydrolase fold JM952_RS11865 PF06434 Aconitate hydratase 2 N-terminus JM952_RS11865 PF00330 Aconitase family (aconitate hydratase) JM952_RS11865 PF11791 Aconitate B N-terminal domain JM952_RS11880 PF00330 Aconitase family (aconitate hydratase) JM952_RS11880 PF00694 Aconitase C-terminal domain JM952_RS11890 PF13193 AMP-binding enzyme C-terminal domain JM952_RS11890 PF00501 AMP-binding enzyme JM952_RS11895 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS11900 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS11900 PF00072 Response regulator receiver domain JM952_RS11900 PF01627 Hpt domain JM952_RS11905 PF01627 Hpt domain JM952_RS11905 PF00072 Response regulator receiver domain JM952_RS11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS11905 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS11910 PF00072 Response regulator receiver domain JM952_RS11915 PF01336 OB-fold nucleic acid binding domain JM952_RS11915 PF00152 tRNA synthetases class II (D, K and N) JM952_RS11925 PF04397 LytTr DNA-binding domain JM952_RS11925 PF00072 Response regulator receiver domain JM952_RS11945 PF01368 DHH family JM952_RS11945 PF02272 DHHA1 domain JM952_RS11945 PF17768 RecJ OB domain JM952_RS11955 PF01272 Transcription elongation factor, GreA/GreB, C-term JM952_RS11955 PF03449 Transcription elongation factor, N-terminal JM952_RS11960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JM952_RS11960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JM952_RS11960 PF02142 MGS-like domain JM952_RS11970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JM952_RS11970 PF00117 Glutamine amidotransferase class-I JM952_RS11975 PF05173 Dihydrodipicolinate reductase, C-terminus JM952_RS11975 PF01113 Dihydrodipicolinate reductase, N-terminus JM952_RS11980 PF03475 3-alpha domain JM952_RS11980 PF03473 MOSC domain JM952_RS11985 PF00155 Aminotransferase class I and II JM952_RS12000 PF02421 Ferrous iron transport protein B JM952_RS12000 PF07670 Nucleoside recognition JM952_RS12000 PF07664 Ferrous iron transport protein B C terminus JM952_RS12010 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS12015 PF00682 HMGL-like JM952_RS12020 PF00106 short chain dehydrogenase JM952_RS12025 PF01132 Elongation factor P (EF-P) OB domain JM952_RS12025 PF08207 Elongation factor P (EF-P) KOW-like domain JM952_RS12025 PF09285 Elongation factor P, C-terminal JM952_RS12045 PF02913 FAD linked oxidases, C-terminal domain JM952_RS12045 PF01565 FAD binding domain JM952_RS12050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JM952_RS12050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JM952_RS12065 PF13520 Amino acid permease JM952_RS12070 PF13520 Amino acid permease JM952_RS12075 PF00596 Class II Aldolase and Adducin N-terminal domain JM952_RS12080 PF03079 ARD/ARD' family JM952_RS12100 PF01502 Phosphoribosyl-AMP cyclohydrolase JM952_RS12100 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JM952_RS12105 PF00977 Histidine biosynthesis protein JM952_RS12110 PF00977 Histidine biosynthesis protein JM952_RS12115 PF00117 Glutamine amidotransferase class-I JM952_RS12120 PF00475 Imidazoleglycerol-phosphate dehydratase JM952_RS12125 PF00155 Aminotransferase class I and II JM952_RS12130 PF00815 Histidinol dehydrogenase JM952_RS12135 PF01634 ATP phosphoribosyltransferase JM952_RS12135 PF08029 HisG, C-terminal domain JM952_RS12145 PF03129 Anticodon binding domain JM952_RS12145 PF13393 Histidyl-tRNA synthetase JM952_RS12150 PF13545 Crp-like helix-turn-helix domain JM952_RS12150 PF00027 Cyclic nucleotide-binding domain JM952_RS12160 PF14821 Threonine synthase N terminus JM952_RS12160 PF00291 Pyridoxal-phosphate dependent enzyme JM952_RS12170 PF00288 GHMP kinases N terminal domain JM952_RS12170 PF08544 GHMP kinases C terminal JM952_RS12175 PF00696 Amino acid kinase family JM952_RS12175 PF03447 Homoserine dehydrogenase, NAD binding domain JM952_RS12175 PF01842 ACT domain JM952_RS12175 PF00742 Homoserine dehydrogenase JM952_RS12175 PF13840 ACT domain JM952_RS12185 PF03073 TspO/MBR family JM952_RS12215 PF00171 Aldehyde dehydrogenase family JM952_RS12230 PF01180 Dihydroorotate dehydrogenase JM952_RS12235 PF01565 FAD binding domain JM952_RS12235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JM952_RS12240 PF00892 EamA-like transporter family JM952_RS12245 PF01177 Asp/Glu/Hydantoin racemase JM952_RS12255 PF01569 PAP2 superfamily JM952_RS12260 PF04551 GcpE protein JM952_RS12270 PF00072 Response regulator receiver domain JM952_RS12275 PF00150 Cellulase (glycosyl hydrolase family 5) JM952_RS12275 PF02013 Cellulose or protein binding domain JM952_RS12280 PF01590 GAF domain JM952_RS12280 PF00360 Phytochrome region JM952_RS12280 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS12280 PF00563 EAL domain JM952_RS12285 PF00474 Sodium:solute symporter family JM952_RS12290 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS12290 PF01915 Glycosyl hydrolase family 3 C-terminal domain JM952_RS12290 PF14310 Fibronectin type III-like domain JM952_RS12305 PF00342 Phosphoglucose isomerase JM952_RS12310 PF02261 Aspartate decarboxylase JM952_RS12315 PF02569 Pantoate-beta-alanine ligase JM952_RS12320 PF02548 Ketopantoate hydroxymethyltransferase JM952_RS12325 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JM952_RS12330 PF12626 Polymerase A arginine-rich C-terminus JM952_RS12330 PF12627 Probable RNA and SrmB- binding site of polymerase A JM952_RS12330 PF01743 Poly A polymerase head domain JM952_RS12340 PF02649 Type I GTP cyclohydrolase folE2 JM952_RS12345 PF01520 N-acetylmuramoyl-L-alanine amidase JM952_RS12365 PF00083 Sugar (and other) transporter JM952_RS12375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JM952_RS12375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JM952_RS12385 PF16338 Domain of unknown function (DUF4968) JM952_RS12385 PF17137 Domain of unknown function (DUF5110) JM952_RS12385 PF01055 Glycosyl hydrolases family 31 JM952_RS12405 PF00942 Cellulose binding domain JM952_RS12405 PF03442 Carbohydrate binding domain X2 JM952_RS12420 PF03466 LysR substrate binding domain JM952_RS12420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS12425 PF01081 KDPG and KHG aldolase JM952_RS12430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM952_RS12430 PF13378 Enolase C-terminal domain-like JM952_RS12435 PF08450 SMP-30/Gluconolactonase/LRE-like region JM952_RS12440 PF05035 2-keto-3-deoxy-galactonokinase JM952_RS12445 PF11953 Domain of unknown function (DUF3470) JM952_RS12445 PF00037 4Fe-4S binding domain JM952_RS12455 PF00701 Dihydrodipicolinate synthetase family JM952_RS12470 PF00578 AhpC/TSA family JM952_RS12475 PF02562 PhoH-like protein JM952_RS12475 PF13638 PIN domain JM952_RS12485 PF02581 Thiamine monophosphate synthase JM952_RS12485 PF08543 Phosphomethylpyrimidine kinase JM952_RS12510 PF03466 LysR substrate binding domain JM952_RS12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS12515 PF02678 Pirin JM952_RS12515 PF17954 Quercetinase C-terminal cupin domain JM952_RS12520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JM952_RS12520 PF08447 PAS fold JM952_RS12520 PF13426 PAS domain JM952_RS12530 PF02599 Global regulator protein family JM952_RS12535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JM952_RS12535 PF01411 tRNA synthetases class II (A) JM952_RS12535 PF02272 DHHA1 domain JM952_RS12540 PF02631 RecX family JM952_RS12545 PF00154 recA bacterial DNA recombination protein JM952_RS12550 PF00717 Peptidase S24-like JM952_RS12550 PF01726 LexA DNA binding domain JM952_RS12555 PF03109 ABC1 family JM952_RS12560 PF07715 TonB-dependent Receptor Plug Domain JM952_RS12560 PF00593 TonB dependent receptor JM952_RS12570 PF02464 Competence-damaged protein JM952_RS12575 PF16360 GTP-binding GTPase Middle Region JM952_RS12575 PF13167 GTP-binding GTPase N-terminal JM952_RS12575 PF01926 50S ribosome-binding GTPase JM952_RS12580 PF17209 Hfq protein JM952_RS12590 PF00809 Pterin binding enzyme JM952_RS12595 PF06480 FtsH Extracellular JM952_RS12595 PF00004 ATPase family associated with various cellular activities (AAA) JM952_RS12595 PF17862 AAA+ lid domain JM952_RS12595 PF01434 Peptidase family M41 JM952_RS12600 PF01728 FtsJ-like methyltransferase JM952_RS12605 PF01985 CRS1 / YhbY (CRM) domain JM952_RS12615 PF01476 LysM domain JM952_RS12615 PF01551 Peptidase family M23 JM952_RS12620 PF09335 SNARE associated Golgi protein JM952_RS12630 PF01975 Survival protein SurE JM952_RS12635 PF01713 Smr domain JM952_RS12645 PF01142 tRNA pseudouridine synthase D (TruD) JM952_RS12650 PF02542 YgbB family JM952_RS12655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JM952_RS12660 PF04977 Septum formation initiator JM952_RS12665 PF00113 Enolase, C-terminal TIM barrel domain JM952_RS12665 PF03952 Enolase, N-terminal domain JM952_RS12675 PF00793 DAHP synthetase I family JM952_RS12680 PF06418 CTP synthase N-terminus JM952_RS12680 PF00117 Glutamine amidotransferase class-I JM952_RS12690 PF00204 DNA gyrase B JM952_RS12690 PF00986 DNA gyrase B subunit, carboxyl terminus JM952_RS12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS12690 PF01751 Toprim domain JM952_RS12695 PF02611 CDP-diacylglycerol pyrophosphatase JM952_RS12710 PF01384 Phosphate transporter family JM952_RS12720 PF01595 Cyclin M transmembrane N-terminal domain JM952_RS12720 PF03471 Transporter associated domain JM952_RS12720 PF00571 CBS domain JM952_RS12735 PF00296 Luciferase-like monooxygenase JM952_RS12740 PF07690 Major Facilitator Superfamily JM952_RS12745 PF00005 ABC transporter JM952_RS12745 PF00664 ABC transporter transmembrane region JM952_RS12765 PF00534 Glycosyl transferases group 1 JM952_RS12765 PF13579 Glycosyl transferase 4-like domain JM952_RS12770 PF00534 Glycosyl transferases group 1 JM952_RS12770 PF13439 Glycosyltransferase Family 4 JM952_RS12780 PF13382 Adenine deaminase C-terminal domain JM952_RS12780 PF01979 Amidohydrolase family JM952_RS12800 PF00535 Glycosyl transferase family 2 JM952_RS12805 PF01943 Polysaccharide biosynthesis protein JM952_RS12810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JM952_RS12815 PF05523 WxcM-like, C-terminal JM952_RS12820 PF01292 Prokaryotic cytochrome b561 JM952_RS12830 PF00034 Cytochrome c JM952_RS12840 PF08281 Sigma-70, region 4 JM952_RS12840 PF04542 Sigma-70 region 2 JM952_RS12850 PF00082 Subtilase family JM952_RS12855 PF01578 Cytochrome C assembly protein JM952_RS12860 PF04995 Heme exporter protein D (CcmD) JM952_RS12865 PF03100 CcmE JM952_RS12870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JM952_RS12870 PF01578 Cytochrome C assembly protein JM952_RS12875 PF08534 Redoxin JM952_RS12880 PF03918 Cytochrome C biogenesis protein JM952_RS12890 PF00072 Response regulator receiver domain JM952_RS12890 PF13426 PAS domain JM952_RS12890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS12895 PF06745 KaiC JM952_RS12900 PF00158 Sigma-54 interaction domain JM952_RS12900 PF02954 Bacterial regulatory protein, Fis family JM952_RS12900 PF00072 Response regulator receiver domain JM952_RS12905 PF08448 PAS fold JM952_RS12905 PF13188 PAS domain JM952_RS12905 PF00072 Response regulator receiver domain JM952_RS12905 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS12905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS12945 PF02585 GlcNAc-PI de-N-acetylase JM952_RS13085 PF04002 RadC-like JAB domain JM952_RS13205 PF02534 Type IV secretory system Conjugative DNA transfer JM952_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS13300 PF03466 LysR substrate binding domain JM952_RS13325 PF04002 RadC-like JAB domain JM952_RS13355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS13355 PF03466 LysR substrate binding domain JM952_RS13360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM952_RS13360 PF02403 Seryl-tRNA synthetase N-terminal domain JM952_RS13365 PF03544 Gram-negative bacterial TonB protein C-terminal JM952_RS13370 PF03544 Gram-negative bacterial TonB protein C-terminal JM952_RS13375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JM952_RS13380 PF00800 Prephenate dehydratase JM952_RS13380 PF01842 ACT domain JM952_RS13380 PF01817 Chorismate mutase type II JM952_RS13385 PF00266 Aminotransferase class-V JM952_RS13390 PF00174 Oxidoreductase molybdopterin binding domain JM952_RS13395 PF01794 Ferric reductase like transmembrane component JM952_RS13420 PF07702 UTRA domain JM952_RS13420 PF00392 Bacterial regulatory proteins, gntR family JM952_RS13430 PF01979 Amidohydrolase family JM952_RS13435 PF00221 Aromatic amino acid lyase JM952_RS13445 PF17392 Urocanase C-terminal domain JM952_RS13445 PF01175 Urocanase Rossmann-like domain JM952_RS13445 PF17391 Urocanase N-terminal domain JM952_RS13455 PF13360 PQQ-like domain JM952_RS13460 PF03989 DNA gyrase C-terminal domain, beta-propeller JM952_RS13460 PF00521 DNA gyrase/topoisomerase IV, subunit A JM952_RS13465 PF01008 Initiation factor 2 subunit family JM952_RS13475 PF00152 tRNA synthetases class II (D, K and N) JM952_RS13480 PF00533 BRCA1 C Terminus (BRCT) domain JM952_RS13480 PF01653 NAD-dependent DNA ligase adenylation domain JM952_RS13480 PF03120 NAD-dependent DNA ligase OB-fold domain JM952_RS13480 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JM952_RS13480 PF12826 Helix-hairpin-helix motif JM952_RS13485 PF00155 Aminotransferase class I and II JM952_RS13490 PF04354 ZipA, C-terminal FtsZ-binding domain JM952_RS13495 PF02463 RecF/RecN/SMC N terminal domain JM952_RS13505 PF01281 Ribosomal protein L9, N-terminal domain JM952_RS13505 PF03948 Ribosomal protein L9, C-terminal domain JM952_RS13510 PF01084 Ribosomal protein S18 JM952_RS13515 PF01250 Ribosomal protein S6 JM952_RS13520 PF01521 Iron-sulphur cluster biosynthesis JM952_RS13525 PF01336 OB-fold nucleic acid binding domain JM952_RS13525 PF00152 tRNA synthetases class II (D, K and N) JM952_RS13550 PF00484 Carbonic anhydrase JM952_RS13555 PF06052 3-hydroxyanthranilic acid dioxygenase JM952_RS13565 PF00266 Aminotransferase class-V JM952_RS13570 PF01494 FAD binding domain JM952_RS13575 PF08411 Exonuclease C-terminal JM952_RS13575 PF00929 Exonuclease JM952_RS13600 PF01513 ATP-NAD kinase JM952_RS13605 PF10672 S-adenosylmethionine-dependent methyltransferase JM952_RS13605 PF02926 THUMP domain JM952_RS13605 PF01170 Putative RNA methylase family UPF0020 JM952_RS13610 PF00005 ABC transporter JM952_RS13610 PF12848 ABC transporter JM952_RS13645 PF00581 Rhodanese-like domain JM952_RS13650 PF00293 NUDIX domain JM952_RS13655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JM952_RS13655 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JM952_RS13660 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS13670 PF10576 Iron-sulfur binding domain of endonuclease III JM952_RS13670 PF00633 Helix-hairpin-helix motif JM952_RS13670 PF00730 HhH-GPD superfamily base excision DNA repair protein JM952_RS13675 PF01740 STAS domain JM952_RS13675 PF00916 Sulfate permease family JM952_RS13680 PF00484 Carbonic anhydrase JM952_RS13695 PF12849 PBP superfamily domain JM952_RS13700 PF12849 PBP superfamily domain JM952_RS13705 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS13710 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS13715 PF00005 ABC transporter JM952_RS13720 PF01895 PhoU domain JM952_RS13730 PF00929 Exonuclease JM952_RS13740 PF08032 RNA 2'-O ribose methyltransferase substrate binding JM952_RS13740 PF00588 SpoU rRNA Methylase family JM952_RS13755 PF17876 Cold shock domain JM952_RS13755 PF08461 Ribonuclease R winged-helix domain JM952_RS13755 PF08206 Ribonuclease B OB domain JM952_RS13755 PF00773 RNB domain JM952_RS13755 PF00575 S1 RNA binding domain JM952_RS13770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM952_RS13770 PF02770 Acyl-CoA dehydrogenase, middle domain JM952_RS13770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM952_RS13775 PF01209 ubiE/COQ5 methyltransferase family JM952_RS13780 PF02574 Homocysteine S-methyltransferase JM952_RS13780 PF00809 Pterin binding enzyme JM952_RS13785 PF02965 Vitamin B12 dependent methionine synthase, activation domain JM952_RS13785 PF02310 B12 binding domain JM952_RS13785 PF02607 B12 binding domain JM952_RS13785 PF00809 Pterin binding enzyme JM952_RS13785 PF02574 Homocysteine S-methyltransferase JM952_RS13795 PF00294 pfkB family carbohydrate kinase JM952_RS13800 PF07690 Major Facilitator Superfamily JM952_RS13805 PF00356 Bacterial regulatory proteins, lacI family JM952_RS13825 PF04102 SlyX JM952_RS13830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JM952_RS13830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JM952_RS13830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JM952_RS13835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JM952_RS13835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JM952_RS13845 PF00255 Glutathione peroxidase JM952_RS13855 PF00392 Bacterial regulatory proteins, gntR family JM952_RS13860 PF00005 ABC transporter JM952_RS13885 PF00206 Lyase JM952_RS13885 PF10415 Fumarase C C-terminus JM952_RS13895 PF08328 Adenylosuccinate lyase C-terminal JM952_RS13895 PF00206 Lyase JM952_RS13905 PF08007 Cupin superfamily protein JM952_RS13915 PF16078 2-oxoglutarate dehydrogenase N-terminus JM952_RS13915 PF00676 Dehydrogenase E1 component JM952_RS13915 PF16870 2-oxoglutarate dehydrogenase C-terminal JM952_RS13915 PF02779 Transketolase, pyrimidine binding domain JM952_RS13920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JM952_RS13920 PF00364 Biotin-requiring enzyme JM952_RS13920 PF02817 e3 binding domain JM952_RS13925 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS13925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM952_RS13930 PF03641 Possible lysine decarboxylase JM952_RS13935 PF01205 Uncharacterized protein family UPF0029 JM952_RS13940 PF00005 ABC transporter JM952_RS13940 PF00664 ABC transporter transmembrane region JM952_RS13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS13945 PF03466 LysR substrate binding domain JM952_RS13950 PF00664 ABC transporter transmembrane region JM952_RS13950 PF00005 ABC transporter JM952_RS13950 PF03412 Peptidase C39 family JM952_RS13975 PF08543 Phosphomethylpyrimidine kinase JM952_RS13985 PF00226 DnaJ domain JM952_RS13985 PF01556 DnaJ C terminal domain JM952_RS13985 PF00684 DnaJ central domain JM952_RS13990 PF00012 Hsp70 protein JM952_RS13995 PF01025 GrpE JM952_RS14000 PF01628 HrcA protein C terminal domain JM952_RS14000 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JM952_RS14005 PF02463 RecF/RecN/SMC N terminal domain JM952_RS14010 PF01475 Ferric uptake regulator family JM952_RS14015 PF04355 SmpA / OmlA family JM952_RS14020 PF03658 RnfH family Ubiquitin JM952_RS14030 PF01668 SmpB protein JM952_RS14035 PF00082 Subtilase family JM952_RS14140 PF01609 Transposase DDE domain JM952_RS14140 PF05598 Transposase domain (DUF772) JM952_RS14190 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS14200 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS14205 PF02321 Outer membrane efflux protein JM952_RS14215 PF00873 AcrB/AcrD/AcrF family JM952_RS14220 PF00529 HlyD membrane-fusion protein of T1SS JM952_RS14220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS14230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS14230 PF03466 LysR substrate binding domain JM952_RS14235 PF00691 OmpA family JM952_RS14235 PF05736 OprF membrane domain JM952_RS14240 PF00875 DNA photolyase JM952_RS14240 PF03441 FAD binding domain of DNA photolyase JM952_RS14245 PF00772 DnaB-like helicase N terminal domain JM952_RS14245 PF03796 DnaB-like helicase C terminal domain JM952_RS14250 PF03358 NADPH-dependent FMN reductase JM952_RS14255 PF00733 Asparagine synthase JM952_RS14255 PF13537 Glutamine amidotransferase domain JM952_RS14260 PF02798 Glutathione S-transferase, N-terminal domain JM952_RS14260 PF00043 Glutathione S-transferase, C-terminal domain JM952_RS14270 PF02770 Acyl-CoA dehydrogenase, middle domain JM952_RS14270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM952_RS14270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM952_RS14285 PF01026 TatD related DNase JM952_RS14290 PF00899 ThiF family JM952_RS14305 PF00313 'Cold-shock' DNA-binding domain JM952_RS14315 PF02253 Phospholipase A1 JM952_RS14320 PF00484 Carbonic anhydrase JM952_RS14335 PF05683 Fumarase C-terminus JM952_RS14335 PF05681 Fumarate hydratase (Fumerase) JM952_RS14340 PF00005 ABC transporter JM952_RS14345 PF00970 Oxidoreductase FAD-binding domain JM952_RS14345 PF00175 Oxidoreductase NAD-binding domain JM952_RS14350 PF00255 Glutathione peroxidase JM952_RS14355 PF01432 Peptidase family M3 JM952_RS14390 PF00854 POT family JM952_RS14400 PF14310 Fibronectin type III-like domain JM952_RS14400 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS14400 PF01915 Glycosyl hydrolase family 3 C-terminal domain JM952_RS14420 PF07690 Major Facilitator Superfamily JM952_RS14425 PF00529 HlyD membrane-fusion protein of T1SS JM952_RS14425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS14430 PF02321 Outer membrane efflux protein JM952_RS14445 PF03989 DNA gyrase C-terminal domain, beta-propeller JM952_RS14445 PF00521 DNA gyrase/topoisomerase IV, subunit A JM952_RS14450 PF05724 Thiopurine S-methyltransferase (TPMT) JM952_RS14455 PF00210 Ferritin-like domain JM952_RS14460 PF01804 Penicillin amidase JM952_RS14465 PF00593 TonB dependent receptor JM952_RS14465 PF07715 TonB-dependent Receptor Plug Domain JM952_RS14475 PF00733 Asparagine synthase JM952_RS14475 PF13537 Glutamine amidotransferase domain JM952_RS14485 PF01546 Peptidase family M20/M25/M40 JM952_RS14485 PF07687 Peptidase dimerisation domain JM952_RS14490 PF03960 ArsC family JM952_RS14500 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JM952_RS14500 PF00132 Bacterial transferase hexapeptide (six repeats) JM952_RS14500 PF14602 Hexapeptide repeat of succinyl-transferase JM952_RS14505 PF08335 GlnD PII-uridylyltransferase JM952_RS14505 PF01909 Nucleotidyltransferase domain JM952_RS14505 PF01966 HD domain JM952_RS14510 PF00557 Metallopeptidase family M24 JM952_RS14530 PF05229 Spore Coat Protein U domain JM952_RS14545 PF00318 Ribosomal protein S2 JM952_RS14550 PF00889 Elongation factor TS JM952_RS14555 PF00072 Response regulator receiver domain JM952_RS14555 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS14560 PF00696 Amino acid kinase family JM952_RS14565 PF01765 Ribosome recycling factor JM952_RS14570 PF01255 Putative undecaprenyl diphosphate synthase JM952_RS14580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JM952_RS14580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JM952_RS14580 PF13288 DXP reductoisomerase C-terminal domain JM952_RS14585 PF17820 PDZ domain JM952_RS14585 PF02163 Peptidase family M50 JM952_RS14590 PF07244 Surface antigen variable number repeat JM952_RS14590 PF01103 Surface antigen JM952_RS14600 PF00132 Bacterial transferase hexapeptide (six repeats) JM952_RS14600 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JM952_RS14605 PF07977 FabA-like domain JM952_RS14610 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JM952_RS14610 PF00132 Bacterial transferase hexapeptide (six repeats) JM952_RS14615 PF02684 Lipid-A-disaccharide synthetase JM952_RS14620 PF01351 Ribonuclease HII JM952_RS14625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JM952_RS14625 PF14579 Helix-hairpin-helix motif JM952_RS14625 PF02811 PHP domain JM952_RS14625 PF01336 OB-fold nucleic acid binding domain JM952_RS14625 PF07733 Bacterial DNA polymerase III alpha NTPase domain JM952_RS14630 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JM952_RS14640 PF03653 Uncharacterised protein family (UPF0093) JM952_RS14660 PF03551 Transcriptional regulator PadR-like family JM952_RS14685 PF02592 Putative vitamin uptake transporter JM952_RS14695 PF02574 Homocysteine S-methyltransferase JM952_RS14700 PF00324 Amino acid permease JM952_RS14705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM952_RS14715 PF07715 TonB-dependent Receptor Plug Domain JM952_RS14715 PF00593 TonB dependent receptor JM952_RS14720 PF09334 tRNA synthetases class I (M) JM952_RS14720 PF01588 Putative tRNA binding domain JM952_RS14730 PF04060 Putative Fe-S cluster JM952_RS14745 PF04542 Sigma-70 region 2 JM952_RS14745 PF04545 Sigma-70, region 4 JM952_RS14790 PF01042 Endoribonuclease L-PSP JM952_RS14800 PF09924 Uncharacterised conserved protein (DUF2156) JM952_RS14800 PF03706 Lysylphosphatidylglycerol synthase TM region JM952_RS14835 PF07690 Major Facilitator Superfamily JM952_RS14840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JM952_RS14865 PF08274 PhnA Zinc-Ribbon JM952_RS14865 PF03831 PhnA domain JM952_RS14875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JM952_RS14900 PF04542 Sigma-70 region 2 JM952_RS14900 PF08281 Sigma-70, region 4 JM952_RS14925 PF01258 Prokaryotic dksA/traR C4-type zinc finger JM952_RS14935 PF07043 Protein of unknown function (DUF1328) JM952_RS14940 PF01863 Protein of unknown function DUF45 JM952_RS14950 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JM952_RS14950 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JM952_RS14960 PF00108 Thiolase, N-terminal domain JM952_RS14960 PF02803 Thiolase, C-terminal domain JM952_RS14975 PF00072 Response regulator receiver domain JM952_RS14975 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS14995 PF04679 ATP dependent DNA ligase C terminal region JM952_RS14995 PF04675 DNA ligase N terminus JM952_RS14995 PF01068 ATP dependent DNA ligase domain JM952_RS15005 PF04679 ATP dependent DNA ligase C terminal region JM952_RS15005 PF01068 ATP dependent DNA ligase domain JM952_RS15005 PF04675 DNA ligase N terminus JM952_RS15010 PF00270 DEAD/DEAH box helicase JM952_RS15010 PF08494 DEAD/H associated JM952_RS15010 PF00271 Helicase conserved C-terminal domain JM952_RS15020 PF01494 FAD binding domain JM952_RS15025 PF00313 'Cold-shock' DNA-binding domain JM952_RS15030 PF01048 Phosphorylase superfamily JM952_RS15035 PF00156 Phosphoribosyl transferase domain JM952_RS15040 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS15045 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JM952_RS15050 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JM952_RS15050 PF01266 FAD dependent oxidoreductase JM952_RS15055 PF01323 DSBA-like thioredoxin domain JM952_RS15060 PF01928 CYTH domain JM952_RS15070 PF05958 tRNA (Uracil-5-)-methyltransferase JM952_RS15075 PF00072 Response regulator receiver domain JM952_RS15075 PF00486 Transcriptional regulatory protein, C terminal JM952_RS15080 PF02565 Recombination protein O C terminal JM952_RS15080 PF11967 Recombination protein O N terminal JM952_RS15085 PF01926 50S ribosome-binding GTPase JM952_RS15085 PF07650 KH domain JM952_RS15090 PF00035 Double-stranded RNA binding motif JM952_RS15090 PF14622 Ribonuclease-III-like JM952_RS15100 PF10502 Signal peptidase, peptidase S26 JM952_RS15105 PF06421 GTP-binding protein LepA C-terminus JM952_RS15105 PF03144 Elongation factor Tu domain 2 JM952_RS15105 PF00679 Elongation factor G C-terminus JM952_RS15105 PF00009 Elongation factor Tu GTP binding domain JM952_RS15110 PF13180 PDZ domain JM952_RS15120 PF08281 Sigma-70, region 4 JM952_RS15120 PF04542 Sigma-70 region 2 JM952_RS15125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JM952_RS15125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JM952_RS15125 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS15130 PF01545 Cation efflux family JM952_RS15135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JM952_RS15135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JM952_RS15140 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS15145 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS15150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JM952_RS15150 PF02770 Acyl-CoA dehydrogenase, middle domain JM952_RS15150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JM952_RS15155 PF00171 Aldehyde dehydrogenase family JM952_RS15160 PF06114 IrrE N-terminal-like domain JM952_RS15160 PF01381 Helix-turn-helix JM952_RS15160 PF09856 Predicted transcriptional regulator (DUF2083) JM952_RS15170 PF07745 Glycosyl hydrolase family 53 JM952_RS15175 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JM952_RS15175 PF00703 Glycosyl hydrolases family 2 JM952_RS15175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JM952_RS15175 PF02837 Glycosyl hydrolases family 2, sugar binding domain JM952_RS15175 PF16355 Domain of unknown function (DUF4982) JM952_RS15205 PF14310 Fibronectin type III-like domain JM952_RS15205 PF01915 Glycosyl hydrolase family 3 C-terminal domain JM952_RS15205 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS15250 PF01464 Transglycosylase SLT domain JM952_RS15260 PF00263 Bacterial type II and III secretion system protein JM952_RS15260 PF03958 Bacterial type II/III secretion system short domain JM952_RS15275 PF18269 T3SS EscN ATPase C-terminal domain JM952_RS15275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM952_RS15275 PF02874 ATP synthase alpha/beta family, beta-barrel domain JM952_RS15290 PF01514 Secretory protein of YscJ/FliF family JM952_RS15305 PF01312 FlhB HrpN YscU SpaS Family JM952_RS15310 PF00771 FHIPEP family JM952_RS15325 PF00813 FliP family JM952_RS15330 PF01313 Bacterial export proteins, family 3 JM952_RS15360 PF03211 Pectate lyase JM952_RS15370 PF05819 NolX protein JM952_RS15380 PF00440 Bacterial regulatory proteins, tetR family JM952_RS15385 PF00155 Aminotransferase class I and II JM952_RS15395 PF00266 Aminotransferase class-V JM952_RS15485 PF04002 RadC-like JAB domain JM952_RS15545 PF00092 von Willebrand factor type A domain JM952_RS15580 PF05188 MutS domain II JM952_RS15580 PF05192 MutS domain III JM952_RS15580 PF05190 MutS family domain IV JM952_RS15580 PF00488 MutS domain V JM952_RS15580 PF01624 MutS domain I JM952_RS15590 PF00141 Peroxidase JM952_RS15595 PF01479 S4 domain JM952_RS15600 PF01554 MatE JM952_RS15605 PF01245 Ribosomal protein L19 JM952_RS15610 PF01746 tRNA (Guanine-1)-methyltransferase JM952_RS15615 PF05239 PRC-barrel domain JM952_RS15615 PF01782 RimM N-terminal domain JM952_RS15620 PF00886 Ribosomal protein S16 JM952_RS15630 PF03060 Nitronate monooxygenase JM952_RS15635 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) JM952_RS15645 PF02978 Signal peptide binding domain JM952_RS15645 PF00448 SRP54-type protein, GTPase domain JM952_RS15645 PF02881 SRP54-type protein, helical bundle domain JM952_RS15650 PF01578 Cytochrome C assembly protein JM952_RS15655 PF01263 Aldose 1-epimerase JM952_RS15660 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JM952_RS15665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS15665 PF03466 LysR substrate binding domain JM952_RS15685 PF00072 Response regulator receiver domain JM952_RS15690 PF13426 PAS domain JM952_RS15690 PF00072 Response regulator receiver domain JM952_RS15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS15695 PF00672 HAMP domain JM952_RS15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS15695 PF01627 Hpt domain JM952_RS15695 PF00072 Response regulator receiver domain JM952_RS15695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JM952_RS15695 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS15700 PF01739 CheR methyltransferase, SAM binding domain JM952_RS15700 PF03705 CheR methyltransferase, all-alpha domain JM952_RS15705 PF01339 CheB methylesterase JM952_RS15710 PF13493 Domain of unknown function (DUF4118) JM952_RS15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS15710 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS15710 PF02702 Osmosensitive K+ channel His kinase sensor domain JM952_RS15710 PF13492 GAF domain JM952_RS15715 PF07237 Protein of unknown function (DUF1428) JM952_RS15720 PF00085 Thioredoxin JM952_RS15725 PF00593 TonB dependent receptor JM952_RS15725 PF07715 TonB-dependent Receptor Plug Domain JM952_RS15730 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JM952_RS15730 PF04616 Glycosyl hydrolases family 43 JM952_RS15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS15735 PF00072 Response regulator receiver domain JM952_RS15735 PF13188 PAS domain JM952_RS15735 PF08448 PAS fold JM952_RS15735 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS15740 PF01627 Hpt domain JM952_RS15740 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS15740 PF00672 HAMP domain JM952_RS15740 PF00072 Response regulator receiver domain JM952_RS15740 PF17149 Periplasmic sensor domain found in signal transduction proteins JM952_RS15750 PF13581 Histidine kinase-like ATPase domain JM952_RS15755 PF01740 STAS domain JM952_RS15760 PF08678 Rsbr N terminal JM952_RS15760 PF01740 STAS domain JM952_RS15765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JM952_RS15775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS15775 PF00183 Hsp90 protein JM952_RS15780 PF12833 Helix-turn-helix domain JM952_RS15795 PF05656 Protein of unknown function (DUF805) JM952_RS15800 PF18073 Rubredoxin metal binding domain JM952_RS15810 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JM952_RS15815 PF00510 Cytochrome c oxidase subunit III JM952_RS15820 PF00115 Cytochrome C and Quinol oxidase polypeptide I JM952_RS15825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JM952_RS15825 PF06481 COX Aromatic Rich Motif JM952_RS15835 PF02401 LytB protein JM952_RS15840 PF01252 Signal peptidase (SPase) II JM952_RS15845 PF08264 Anticodon-binding domain of tRNA JM952_RS15845 PF00133 tRNA synthetases class I (I, L, M and V) JM952_RS15845 PF06827 Zinc finger found in FPG and IleRS JM952_RS15850 PF06574 FAD synthetase JM952_RS15850 PF01687 Riboflavin kinase JM952_RS15855 PF03023 Lipid II flippase MurJ JM952_RS15860 PF01649 Ribosomal protein S20 JM952_RS15865 PF01018 GTP1/OBG JM952_RS15865 PF01926 50S ribosome-binding GTPase JM952_RS15870 PF01016 Ribosomal L27 protein JM952_RS15875 PF00829 Ribosomal prokaryotic L21 protein JM952_RS15880 PF17755 UvrA DNA-binding domain JM952_RS15880 PF17760 UvrA interaction domain JM952_RS15880 PF00005 ABC transporter JM952_RS15890 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS15910 PF08281 Sigma-70, region 4 JM952_RS15910 PF04542 Sigma-70 region 2 JM952_RS15920 PF04377 Arginine-tRNA-protein transferase, C terminus JM952_RS15920 PF04376 Arginine-tRNA-protein transferase, N terminus JM952_RS15940 PF02222 ATP-grasp domain JM952_RS15940 PF01370 NAD dependent epimerase/dehydratase family JM952_RS15970 PF00730 HhH-GPD superfamily base excision DNA repair protein JM952_RS15995 PF00072 Response regulator receiver domain JM952_RS15995 PF00196 Bacterial regulatory proteins, luxR family JM952_RS16000 PF07730 Histidine kinase JM952_RS16010 PF05209 Septum formation inhibitor MinC, N-terminal domain JM952_RS16010 PF03775 Septum formation inhibitor MinC, C-terminal domain JM952_RS16015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JM952_RS16020 PF03776 Septum formation topological specificity factor MinE JM952_RS16030 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS16035 PF00072 Response regulator receiver domain JM952_RS16035 PF00486 Transcriptional regulatory protein, C terminal JM952_RS16050 PF00884 Sulfatase JM952_RS16050 PF08019 Phosphoethanolamine transferase EptA/EptB JM952_RS16070 PF07690 Major Facilitator Superfamily JM952_RS16075 PF02347 Glycine cleavage system P-protein JM952_RS16090 PF00248 Aldo/keto reductase family JM952_RS16095 PF18011 C-terminal domain found in long catalases JM952_RS16095 PF06628 Catalase-related immune-responsive JM952_RS16095 PF00199 Catalase JM952_RS16110 PF12833 Helix-turn-helix domain JM952_RS16110 PF02311 AraC-like ligand binding domain JM952_RS16130 PF00326 Prolyl oligopeptidase family JM952_RS16130 PF07676 WD40-like Beta Propeller Repeat JM952_RS16130 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JM952_RS16140 PF03169 OPT oligopeptide transporter protein JM952_RS16150 PF02811 PHP domain JM952_RS16150 PF14579 Helix-hairpin-helix motif JM952_RS16150 PF07733 Bacterial DNA polymerase III alpha NTPase domain JM952_RS16150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JM952_RS16165 PF01726 LexA DNA binding domain JM952_RS16165 PF00717 Peptidase S24-like JM952_RS16195 PF00111 2Fe-2S iron-sulfur cluster binding domain JM952_RS16195 PF01799 [2Fe-2S] binding domain JM952_RS16195 PF10518 TAT (twin-arginine translocation) pathway signal sequence JM952_RS16200 PF03450 CO dehydrogenase flavoprotein C-terminal domain JM952_RS16200 PF00941 FAD binding domain in molybdopterin dehydrogenase JM952_RS16205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JM952_RS16205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JM952_RS16210 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS16210 PF14310 Fibronectin type III-like domain JM952_RS16210 PF01915 Glycosyl hydrolase family 3 C-terminal domain JM952_RS16220 PF17755 UvrA DNA-binding domain JM952_RS16240 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS16250 PF00106 short chain dehydrogenase JM952_RS16255 PF07971 Glycosyl hydrolase family 92 JM952_RS16255 PF17678 Glycosyl hydrolase family 92 N-terminal domain JM952_RS16270 PF00723 Glycosyl hydrolases family 15 JM952_RS16285 PF01256 Carbohydrate kinase JM952_RS16290 PF13456 Reverse transcriptase-like JM952_RS16290 PF00300 Histidine phosphatase superfamily (branch 1) JM952_RS16320 PF12008 Type I restriction and modification enzyme - subunit R C terminal JM952_RS16320 PF18766 SWI2/SNF2 ATPase JM952_RS16320 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JM952_RS16325 PF01420 Type I restriction modification DNA specificity domain JM952_RS16335 PF12161 HsdM N-terminal domain JM952_RS16335 PF02384 N-6 DNA Methylase JM952_RS16385 PF01433 Peptidase family M1 domain JM952_RS16385 PF11838 ERAP1-like C-terminal domain JM952_RS16390 PF00709 Adenylosuccinate synthetase JM952_RS16400 PF01145 SPFH domain / Band 7 family JM952_RS16405 PF01145 SPFH domain / Band 7 family JM952_RS16405 PF12221 Bacterial membrane protein N terminal JM952_RS16410 PF00072 Response regulator receiver domain JM952_RS16415 PF00226 DnaJ domain JM952_RS16415 PF01556 DnaJ C terminal domain JM952_RS16420 PF00011 Hsp20/alpha crystallin family JM952_RS16425 PF08534 Redoxin JM952_RS16435 PF00912 Transglycosylase JM952_RS16435 PF00905 Penicillin binding protein transpeptidase domain JM952_RS16435 PF06832 Penicillin-Binding Protein C-terminus Family JM952_RS16460 PF00207 Alpha-2-macroglobulin family JM952_RS16460 PF07703 Alpha-2-macroglobulin bait region domain JM952_RS16460 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JM952_RS16460 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JM952_RS16460 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JM952_RS16460 PF01835 MG2 domain JM952_RS16460 PF17962 Bacterial macroglobulin domain 6 JM952_RS16460 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JM952_RS16470 PF00593 TonB dependent receptor JM952_RS16470 PF07715 TonB-dependent Receptor Plug Domain JM952_RS16475 PF04303 PrpF protein JM952_RS16490 PF00330 Aconitase family (aconitate hydratase) JM952_RS16490 PF00694 Aconitase C-terminal domain JM952_RS16495 PF00285 Citrate synthase, C-terminal domain JM952_RS16505 PF00158 Sigma-54 interaction domain JM952_RS16505 PF06506 Propionate catabolism activator JM952_RS16505 PF02954 Bacterial regulatory protein, Fis family JM952_RS16610 PF09115 DNA polymerase III, delta subunit, C terminal JM952_RS16615 PF02618 YceG-like family JM952_RS16620 PF04715 Anthranilate synthase component I, N terminal region JM952_RS16620 PF00425 chorismate binding enzyme JM952_RS16625 PF00109 Beta-ketoacyl synthase, N-terminal domain JM952_RS16625 PF02801 Beta-ketoacyl synthase, C-terminal domain JM952_RS16630 PF00550 Phosphopantetheine attachment site JM952_RS16640 PF00698 Acyl transferase domain JM952_RS16645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JM952_RS16645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JM952_RS16650 PF01783 Ribosomal L32p protein family JM952_RS16655 PF02620 Large ribosomal RNA subunit accumulation protein YceD JM952_RS16660 PF02545 Maf-like protein JM952_RS16685 PF17863 AAA lid domain JM952_RS16685 PF07726 ATPase family associated with various cellular activities (AAA) JM952_RS16695 PF11992 Domain of unknown function (DUF3488) JM952_RS16695 PF13559 Domain of unknown function (DUF4129) JM952_RS16695 PF01841 Transglutaminase-like superfamily JM952_RS16705 PF01230 HIT domain JM952_RS16710 PF02132 RecR protein JM952_RS16710 PF13662 Toprim domain JM952_RS16715 PF02575 YbaB/EbfC DNA-binding family JM952_RS16720 PF12170 DNA polymerase III tau subunit V interacting with alpha JM952_RS16720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JM952_RS16720 PF12169 DNA polymerase III subunits gamma and tau domain III JM952_RS16735 PF02391 MoaE protein JM952_RS16740 PF02597 ThiS family JM952_RS16745 PF01967 MoaC family JM952_RS16755 PF06463 Molybdenum Cofactor Synthesis C JM952_RS16755 PF04055 Radical SAM superfamily JM952_RS16760 PF00753 Metallo-beta-lactamase superfamily JM952_RS16760 PF12706 Beta-lactamase superfamily domain JM952_RS16770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JM952_RS16790 PF00929 Exonuclease JM952_RS16795 PF00075 RNase H JM952_RS16805 PF16123 Hydroxyacylglutathione hydrolase C-terminus JM952_RS16805 PF00753 Metallo-beta-lactamase superfamily JM952_RS16810 PF05257 CHAP domain JM952_RS16810 PF01476 LysM domain JM952_RS16835 PF00216 Bacterial DNA-binding protein JM952_RS16840 PF02190 ATP-dependent protease La (LON) substrate-binding domain JM952_RS16840 PF00004 ATPase family associated with various cellular activities (AAA) JM952_RS16840 PF05362 Lon protease (S16) C-terminal proteolytic domain JM952_RS16845 PF06689 ClpX C4-type zinc finger JM952_RS16845 PF10431 C-terminal, D2-small domain, of ClpB protein JM952_RS16845 PF07724 AAA domain (Cdc48 subfamily) JM952_RS16850 PF00574 Clp protease JM952_RS16855 PF05698 Bacterial trigger factor protein (TF) C-terminus JM952_RS16855 PF05697 Bacterial trigger factor protein (TF) JM952_RS16890 PF00180 Isocitrate/isopropylmalate dehydrogenase JM952_RS16890 PF18324 Hypothetical protein TT1725 JM952_RS16900 PF00462 Glutaredoxin JM952_RS16905 PF01435 Peptidase family M48 JM952_RS16905 PF13181 Tetratricopeptide repeat JM952_RS16910 PF00486 Transcriptional regulatory protein, C terminal JM952_RS16910 PF00072 Response regulator receiver domain JM952_RS16915 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS16915 PF11808 Phosphate regulon sensor protein PhoR JM952_RS16915 PF00989 PAS fold JM952_RS16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS16920 PF02503 Polyphosphate kinase middle domain JM952_RS16920 PF13090 Polyphosphate kinase C-terminal domain 2 JM952_RS16920 PF17941 Polyphosphate kinase C-terminal domain 1 JM952_RS16920 PF13089 Polyphosphate kinase N-terminal domain JM952_RS16925 PF02541 Ppx/GppA phosphatase family JM952_RS16930 PF00534 Glycosyl transferases group 1 JM952_RS16930 PF13439 Glycosyltransferase Family 4 JM952_RS16935 PF01569 PAP2 superfamily JM952_RS16940 PF00149 Calcineurin-like phosphoesterase JM952_RS16955 PF04305 Protein of unknown function (DUF455) JM952_RS16960 PF00156 Phosphoribosyl transferase domain JM952_RS16975 PF02875 Mur ligase family, glutamate ligase domain JM952_RS16975 PF08245 Mur ligase middle domain JM952_RS16990 PF00300 Histidine phosphatase superfamily (branch 1) JM952_RS16995 PF05506 Domain of unknown function (DUF756) JM952_RS16995 PF04185 Phosphoesterase family JM952_RS17005 PF00107 Zinc-binding dehydrogenase JM952_RS17005 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS17015 PF00005 ABC transporter JM952_RS17015 PF12857 TOBE-like domain JM952_RS17020 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS17025 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS17035 PF00155 Aminotransferase class I and II JM952_RS17045 PF00849 RNA pseudouridylate synthase JM952_RS17055 PF05736 OprF membrane domain JM952_RS17055 PF00691 OmpA family JM952_RS17060 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS17060 PF00107 Zinc-binding dehydrogenase JM952_RS17065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JM952_RS17065 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS17085 PF00043 Glutathione S-transferase, C-terminal domain JM952_RS17085 PF02798 Glutathione S-transferase, N-terminal domain JM952_RS17090 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JM952_RS17090 PF00056 lactate/malate dehydrogenase, NAD binding domain JM952_RS17095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JM952_RS17100 PF00009 Elongation factor Tu GTP binding domain JM952_RS17100 PF03144 Elongation factor Tu domain 2 JM952_RS17100 PF00679 Elongation factor G C-terminus JM952_RS17110 PF01425 Amidase JM952_RS17125 PF01474 Class-II DAHP synthetase family JM952_RS17130 PF02600 Disulfide bond formation protein DsbB JM952_RS17135 PF01196 Ribosomal protein L17 JM952_RS17140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JM952_RS17140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JM952_RS17140 PF01000 RNA polymerase Rpb3/RpoA insert domain JM952_RS17145 PF00163 Ribosomal protein S4/S9 N-terminal domain JM952_RS17145 PF01479 S4 domain JM952_RS17150 PF00411 Ribosomal protein S11 JM952_RS17155 PF00416 Ribosomal protein S13/S18 JM952_RS17160 PF00344 SecY translocase JM952_RS17165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JM952_RS17170 PF00327 Ribosomal protein L30p/L7e JM952_RS17175 PF03719 Ribosomal protein S5, C-terminal domain JM952_RS17175 PF00333 Ribosomal protein S5, N-terminal domain JM952_RS17180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JM952_RS17185 PF00347 Ribosomal protein L6 JM952_RS17190 PF00410 Ribosomal protein S8 JM952_RS17195 PF00253 Ribosomal protein S14p/S29e JM952_RS17200 PF00281 Ribosomal protein L5 JM952_RS17200 PF00673 ribosomal L5P family C-terminus JM952_RS17205 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JM952_RS17205 PF00467 KOW motif JM952_RS17210 PF00238 Ribosomal protein L14p/L23e JM952_RS17215 PF00366 Ribosomal protein S17 JM952_RS17220 PF00831 Ribosomal L29 protein JM952_RS17225 PF00252 Ribosomal protein L16p/L10e JM952_RS17230 PF00189 Ribosomal protein S3, C-terminal domain JM952_RS17230 PF07650 KH domain JM952_RS17235 PF00237 Ribosomal protein L22p/L17e JM952_RS17240 PF00203 Ribosomal protein S19 JM952_RS17245 PF03947 Ribosomal Proteins L2, C-terminal domain JM952_RS17245 PF00181 Ribosomal Proteins L2, RNA binding domain JM952_RS17250 PF00276 Ribosomal protein L23 JM952_RS17255 PF00573 Ribosomal protein L4/L1 family JM952_RS17260 PF00297 Ribosomal protein L3 JM952_RS17265 PF00338 Ribosomal protein S10p/S20e JM952_RS17270 PF03143 Elongation factor Tu C-terminal domain JM952_RS17270 PF00009 Elongation factor Tu GTP binding domain JM952_RS17270 PF03144 Elongation factor Tu domain 2 JM952_RS17275 PF00679 Elongation factor G C-terminus JM952_RS17275 PF14492 Elongation Factor G, domain II JM952_RS17275 PF03764 Elongation factor G, domain IV JM952_RS17275 PF03144 Elongation factor Tu domain 2 JM952_RS17275 PF00009 Elongation factor Tu GTP binding domain JM952_RS17280 PF00177 Ribosomal protein S7p/S5e JM952_RS17285 PF00164 Ribosomal protein S12/S23 JM952_RS17290 PF00623 RNA polymerase Rpb1, domain 2 JM952_RS17290 PF05000 RNA polymerase Rpb1, domain 4 JM952_RS17290 PF04997 RNA polymerase Rpb1, domain 1 JM952_RS17290 PF04983 RNA polymerase Rpb1, domain 3 JM952_RS17290 PF04998 RNA polymerase Rpb1, domain 5 JM952_RS17295 PF04561 RNA polymerase Rpb2, domain 2 JM952_RS17295 PF04565 RNA polymerase Rpb2, domain 3 JM952_RS17295 PF10385 RNA polymerase beta subunit external 1 domain JM952_RS17295 PF00562 RNA polymerase Rpb2, domain 6 JM952_RS17295 PF04560 RNA polymerase Rpb2, domain 7 JM952_RS17295 PF04563 RNA polymerase beta subunit JM952_RS17300 PF16320 Ribosomal protein L7/L12 dimerisation domain JM952_RS17300 PF00542 Ribosomal protein L7/L12 C-terminal domain JM952_RS17305 PF00466 Ribosomal protein L10 JM952_RS17310 PF00687 Ribosomal protein L1p/L10e family JM952_RS17315 PF00298 Ribosomal protein L11, RNA binding domain JM952_RS17315 PF03946 Ribosomal protein L11, N-terminal domain JM952_RS17320 PF02357 Transcription termination factor nusG JM952_RS17320 PF00467 KOW motif JM952_RS17325 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JM952_RS17335 PF00009 Elongation factor Tu GTP binding domain JM952_RS17335 PF03144 Elongation factor Tu domain 2 JM952_RS17335 PF03143 Elongation factor Tu C-terminal domain JM952_RS17355 PF01926 50S ribosome-binding GTPase JM952_RS17355 PF06071 Protein of unknown function (DUF933) JM952_RS17360 PF01195 Peptidyl-tRNA hydrolase JM952_RS17365 PF01386 Ribosomal L25p family JM952_RS17365 PF14693 Ribosomal protein TL5, C-terminal domain JM952_RS17370 PF14572 Phosphoribosyl synthetase-associated domain JM952_RS17370 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JM952_RS17380 PF08544 GHMP kinases C terminal JM952_RS17380 PF00288 GHMP kinases N terminal domain JM952_RS17385 PF03550 Outer membrane lipoprotein LolB JM952_RS17395 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JM952_RS17395 PF01488 Shikimate / quinate 5-dehydrogenase JM952_RS17395 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JM952_RS17400 PF03462 PCRF domain JM952_RS17400 PF00472 RF-1 domain JM952_RS17410 PF00994 Probable molybdopterin binding domain JM952_RS17415 PF03976 Polyphosphate kinase 2 (PPK2) JM952_RS17425 PF00708 Acylphosphatase JM952_RS17430 PF08534 Redoxin JM952_RS17435 PF03631 Virulence factor BrkB JM952_RS17440 PF03358 NADPH-dependent FMN reductase JM952_RS17450 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain JM952_RS17450 PF17189 Glycosyl hydrolase family 30 beta sandwich domain JM952_RS17460 PF04073 Aminoacyl-tRNA editing domain JM952_RS17465 PF04151 Bacterial pre-peptidase C-terminal domain JM952_RS17465 PF00082 Subtilase family JM952_RS17475 PF04151 Bacterial pre-peptidase C-terminal domain JM952_RS17475 PF00082 Subtilase family JM952_RS17480 PF01063 Amino-transferase class IV JM952_RS17545 PF00881 Nitroreductase family JM952_RS17550 PF01612 3'-5' exonuclease JM952_RS17550 PF01367 5'-3' exonuclease, C-terminal SAM fold JM952_RS17550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JM952_RS17550 PF00476 DNA polymerase family A JM952_RS17555 PF00293 NUDIX domain JM952_RS17565 PF00561 alpha/beta hydrolase fold JM952_RS17570 PF17827 PrmC N-terminal domain JM952_RS17570 PF05175 Methyltransferase small domain JM952_RS17575 PF00578 AhpC/TSA family JM952_RS17575 PF10417 C-terminal domain of 1-Cys peroxiredoxin JM952_RS17580 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS17580 PF13192 Thioredoxin domain JM952_RS17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS17585 PF03466 LysR substrate binding domain JM952_RS17590 PF01272 Transcription elongation factor, GreA/GreB, C-term JM952_RS17590 PF14760 Rnk N-terminus JM952_RS17595 PF00923 Transaldolase/Fructose-6-phosphate aldolase JM952_RS17605 PF01625 Peptide methionine sulfoxide reductase JM952_RS17615 PF00196 Bacterial regulatory proteins, luxR family JM952_RS17615 PF00072 Response regulator receiver domain JM952_RS17620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JM952_RS17620 PF00672 HAMP domain JM952_RS17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS17620 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS17620 PF00072 Response regulator receiver domain JM952_RS17620 PF01627 Hpt domain JM952_RS17625 PF00072 Response regulator receiver domain JM952_RS17625 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS17640 PF00749 tRNA synthetases class I (E and Q), catalytic domain JM952_RS17640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JM952_RS17645 PF12833 Helix-turn-helix domain JM952_RS17645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JM952_RS17650 PF00892 EamA-like transporter family JM952_RS17670 PF01728 FtsJ-like methyltransferase JM952_RS17670 PF18125 RlmM ferredoxin-like domain JM952_RS17675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM952_RS17675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JM952_RS17680 PF08450 SMP-30/Gluconolactonase/LRE-like region JM952_RS17700 PF00378 Enoyl-CoA hydratase/isomerase JM952_RS17710 PF13193 AMP-binding enzyme C-terminal domain JM952_RS17710 PF00501 AMP-binding enzyme JM952_RS17715 PF03466 LysR substrate binding domain JM952_RS17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS17720 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit JM952_RS17720 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JM952_RS17725 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JM952_RS17730 PF07729 FCD domain JM952_RS17730 PF00392 Bacterial regulatory proteins, gntR family JM952_RS17750 PF01494 FAD binding domain JM952_RS17755 PF01494 FAD binding domain JM952_RS17765 PF01923 Cobalamin adenosyltransferase JM952_RS17770 PF00850 Histone deacetylase domain JM952_RS17775 PF03968 OstA-like protein JM952_RS17775 PF04453 LPS transport system D JM952_RS17780 PF00639 PPIC-type PPIASE domain JM952_RS17780 PF09312 SurA N-terminal domain JM952_RS17785 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JM952_RS17795 PF00398 Ribosomal RNA adenine dimethylase JM952_RS17800 PF04379 ApaG domain JM952_RS17805 PF00149 Calcineurin-like phosphoesterase JM952_RS17810 PF00186 Dihydrofolate reductase JM952_RS17815 PF00303 Thymidylate synthase JM952_RS17820 PF01790 Prolipoprotein diacylglyceryl transferase JM952_RS17840 PF01219 Prokaryotic diacylglycerol kinase JM952_RS17850 PF08521 Two-component sensor kinase N-terminal JM952_RS17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS17850 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS17855 PF00072 Response regulator receiver domain JM952_RS17855 PF00486 Transcriptional regulatory protein, C terminal JM952_RS17860 PF13472 GDSL-like Lipase/Acylhydrolase family JM952_RS17865 PF00005 ABC transporter JM952_RS17875 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JM952_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS17910 PF07715 TonB-dependent Receptor Plug Domain JM952_RS17910 PF00593 TonB dependent receptor JM952_RS17920 PF00248 Aldo/keto reductase family JM952_RS17925 PF07670 Nucleoside recognition JM952_RS17925 PF07662 Na+ dependent nucleoside transporter C-terminus JM952_RS17925 PF01773 Na+ dependent nucleoside transporter N-terminus JM952_RS17930 PF00294 pfkB family carbohydrate kinase JM952_RS17930 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JM952_RS17935 PF01207 Dihydrouridine synthase (Dus) JM952_RS17945 PF02773 S-adenosylmethionine synthetase, C-terminal domain JM952_RS17945 PF02772 S-adenosylmethionine synthetase, central domain JM952_RS17945 PF00438 S-adenosylmethionine synthetase, N-terminal domain JM952_RS17955 PF00328 Histidine phosphatase superfamily (branch 2) JM952_RS17970 PF00691 OmpA family JM952_RS17970 PF01389 OmpA-like transmembrane domain JM952_RS17990 PF00311 Phosphoenolpyruvate carboxylase JM952_RS18000 PF05221 S-adenosyl-L-homocysteine hydrolase JM952_RS18000 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JM952_RS18030 PF00128 Alpha amylase, catalytic domain JM952_RS18050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JM952_RS18065 PF14765 Polyketide synthase dehydratase JM952_RS18065 PF00550 Phosphopantetheine attachment site JM952_RS18065 PF00109 Beta-ketoacyl synthase, N-terminal domain JM952_RS18065 PF08659 KR domain JM952_RS18065 PF16197 Ketoacyl-synthetase C-terminal extension JM952_RS18065 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS18065 PF00698 Acyl transferase domain JM952_RS18065 PF02801 Beta-ketoacyl synthase, C-terminal domain JM952_RS18065 PF00107 Zinc-binding dehydrogenase JM952_RS18080 PF02219 Methylenetetrahydrofolate reductase JM952_RS18095 PF00293 NUDIX domain JM952_RS18105 PF07517 SecA DEAD-like domain JM952_RS18105 PF02810 SEC-C motif JM952_RS18105 PF01043 SecA preprotein cross-linking domain JM952_RS18105 PF07516 SecA Wing and Scaffold domain JM952_RS18110 PF08525 Opacity-associated protein A N-terminal motif JM952_RS18110 PF01476 LysM domain JM952_RS18110 PF01551 Peptidase family M23 JM952_RS18120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JM952_RS18125 PF12327 FtsZ family, C-terminal domain JM952_RS18125 PF00091 Tubulin/FtsZ family, GTPase domain JM952_RS18130 PF02491 SHS2 domain inserted in FTSA JM952_RS18135 PF03799 Cell division protein FtsQ JM952_RS18135 PF08478 POTRA domain, FtsQ-type JM952_RS18140 PF07478 D-ala D-ala ligase C-terminus JM952_RS18140 PF01820 D-ala D-ala ligase N-terminus JM952_RS18145 PF08245 Mur ligase middle domain JM952_RS18145 PF01225 Mur ligase family, catalytic domain JM952_RS18145 PF02875 Mur ligase family, glutamate ligase domain JM952_RS18150 PF04101 Glycosyltransferase family 28 C-terminal domain JM952_RS18150 PF03033 Glycosyltransferase family 28 N-terminal domain JM952_RS18155 PF01098 Cell cycle protein JM952_RS18160 PF00953 Glycosyl transferase family 4 JM952_RS18165 PF01225 Mur ligase family, catalytic domain JM952_RS18165 PF02875 Mur ligase family, glutamate ligase domain JM952_RS18165 PF08245 Mur ligase middle domain JM952_RS18170 PF01225 Mur ligase family, catalytic domain JM952_RS18170 PF02875 Mur ligase family, glutamate ligase domain JM952_RS18170 PF08245 Mur ligase middle domain JM952_RS18175 PF03717 Penicillin-binding Protein dimerisation domain JM952_RS18175 PF00905 Penicillin binding protein transpeptidase domain JM952_RS18180 PF04999 Cell division protein FtsL JM952_RS18185 PF01795 MraW methylase family JM952_RS18190 PF02381 MraZ protein, putative antitoxin-like JM952_RS18215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JM952_RS18225 PF02021 Uncharacterised protein family UPF0102 JM952_RS18230 PF04307 LexA-binding, inner membrane-associated putative hydrolase JM952_RS18235 PF01565 FAD binding domain JM952_RS18235 PF02913 FAD linked oxidases, C-terminal domain JM952_RS18245 PF00486 Transcriptional regulatory protein, C terminal JM952_RS18245 PF00072 Response regulator receiver domain JM952_RS18250 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS18250 PF13493 Domain of unknown function (DUF4118) JM952_RS18250 PF13492 GAF domain JM952_RS18250 PF02702 Osmosensitive K+ channel His kinase sensor domain JM952_RS18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS18255 PF02669 K+-transporting ATPase, c chain JM952_RS18265 PF03814 Potassium-transporting ATPase A subunit JM952_RS18280 PF00586 AIR synthase related protein, N-terminal domain JM952_RS18280 PF02769 AIR synthase related protein, C-terminal domain JM952_RS18285 PF01029 NusB family JM952_RS18290 PF00885 6,7-dimethyl-8-ribityllumazine synthase JM952_RS18295 PF00925 GTP cyclohydrolase II JM952_RS18295 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JM952_RS18300 PF00677 Lumazine binding domain JM952_RS18310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JM952_RS18310 PF01872 RibD C-terminal domain JM952_RS18320 PF03477 ATP cone domain JM952_RS18325 PF00464 Serine hydroxymethyltransferase JM952_RS18335 PF12848 ABC transporter JM952_RS18335 PF00005 ABC transporter JM952_RS18340 PF01327 Polypeptide deformylase JM952_RS18345 PF03960 ArsC family JM952_RS18365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JM952_RS18365 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JM952_RS18400 PF07715 TonB-dependent Receptor Plug Domain JM952_RS18400 PF00593 TonB dependent receptor JM952_RS18410 PF00392 Bacterial regulatory proteins, gntR family JM952_RS18410 PF07702 UTRA domain JM952_RS18425 PF00263 Bacterial type II and III secretion system protein JM952_RS18425 PF03958 Bacterial type II/III secretion system short domain JM952_RS18435 PF10741 Type II secretion system (T2SS), protein M subtype b JM952_RS18440 PF05137 Fimbrial assembly protein (PilN) JM952_RS18445 PF03934 Type II secretion system (T2SS), protein K JM952_RS18455 PF07963 Prokaryotic N-terminal methylation motif JM952_RS18460 PF12019 Type II transport protein GspH JM952_RS18465 PF08334 Type II secretion system (T2SS), protein G JM952_RS18470 PF00482 Type II secretion system (T2SS), protein F JM952_RS18475 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JM952_RS18475 PF00437 Type II/IV secretion system protein JM952_RS18480 PF00082 Subtilase family JM952_RS18480 PF04151 Bacterial pre-peptidase C-terminal domain JM952_RS18485 PF13018 Extended Signal Peptide of Type V secretion system JM952_RS18485 PF05662 Coiled stalk of trimeric autotransporter adhesin JM952_RS18485 PF05658 Head domain of trimeric autotransporter adhesin JM952_RS18485 PF03895 YadA-like membrane anchor domain JM952_RS18495 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JM952_RS18495 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JM952_RS18495 PF02769 AIR synthase related protein, C-terminal domain JM952_RS18500 PF13098 Thioredoxin-like domain JM952_RS18500 PF10411 Disulfide bond isomerase protein N-terminus JM952_RS18505 PF00589 Phage integrase family JM952_RS18505 PF02899 Phage integrase, N-terminal SAM-like domain JM952_RS18520 PF03739 Lipopolysaccharide export system permease LptF/LptG JM952_RS18530 PF02789 Cytosol aminopeptidase family, N-terminal domain JM952_RS18530 PF00883 Cytosol aminopeptidase family, catalytic domain JM952_RS18550 PF08264 Anticodon-binding domain of tRNA JM952_RS18550 PF00133 tRNA synthetases class I (I, L, M and V) JM952_RS18550 PF10458 Valyl tRNA synthetase tRNA binding arm JM952_RS18560 PF00544 Pectate lyase JM952_RS18565 PF00544 Pectate lyase JM952_RS18580 PF01066 CDP-alcohol phosphatidyltransferase JM952_RS18590 PF03129 Anticodon binding domain JM952_RS18590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JM952_RS18590 PF04073 Aminoacyl-tRNA editing domain JM952_RS18595 PF00816 H-NS histone family JM952_RS18605 PF02405 Permease MlaE JM952_RS18610 PF00005 ABC transporter JM952_RS18615 PF03886 ABC-type transport auxiliary lipoprotein component JM952_RS18615 PF02470 MlaD protein JM952_RS18640 PF14307 Glycosyltransferase WbsX JM952_RS18640 PF05045 Rhamnan synthesis protein F JM952_RS18645 PF01144 Coenzyme A transferase JM952_RS18650 PF01144 Coenzyme A transferase JM952_RS18655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JM952_RS18655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JM952_RS18655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JM952_RS18655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JM952_RS18660 PF01050 Mannose-6-phosphate isomerase JM952_RS18660 PF00483 Nucleotidyl transferase JM952_RS18665 PF04321 RmlD substrate binding domain JM952_RS18670 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JM952_RS18675 PF00483 Nucleotidyl transferase JM952_RS18680 PF16363 GDP-mannose 4,6 dehydratase JM952_RS18685 PF01012 Electron transfer flavoprotein domain JM952_RS18690 PF00766 Electron transfer flavoprotein FAD-binding domain JM952_RS18690 PF01012 Electron transfer flavoprotein domain JM952_RS18695 PF01050 Mannose-6-phosphate isomerase JM952_RS18695 PF00483 Nucleotidyl transferase JM952_RS18700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JM952_RS18705 PF00535 Glycosyl transferase family 2 JM952_RS18725 PF01370 NAD dependent epimerase/dehydratase family JM952_RS18730 PF16363 GDP-mannose 4,6 dehydratase JM952_RS18745 PF00534 Glycosyl transferases group 1 JM952_RS18745 PF13439 Glycosyltransferase Family 4 JM952_RS18750 PF00069 Protein kinase domain JM952_RS18750 PF13847 Methyltransferase domain JM952_RS18755 PF00005 ABC transporter JM952_RS18770 PF01053 Cys/Met metabolism PLP-dependent enzyme JM952_RS18775 PF00571 CBS domain JM952_RS18775 PF00291 Pyridoxal-phosphate dependent enzyme JM952_RS18795 PF00437 Type II/IV secretion system protein JM952_RS18800 PF02798 Glutathione S-transferase, N-terminal domain JM952_RS18800 PF14497 Glutathione S-transferase, C-terminal domain JM952_RS18810 PF00270 DEAD/DEAH box helicase JM952_RS18810 PF00271 Helicase conserved C-terminal domain JM952_RS18815 PF01242 6-pyruvoyl tetrahydropterin synthase JM952_RS18830 PF13185 GAF domain JM952_RS18840 PF13419 Haloacid dehalogenase-like hydrolase JM952_RS18845 PF11798 IMS family HHH motif JM952_RS18845 PF11799 impB/mucB/samB family C-terminal domain JM952_RS18845 PF00817 impB/mucB/samB family JM952_RS18850 PF07977 FabA-like domain JM952_RS18855 PF00109 Beta-ketoacyl synthase, N-terminal domain JM952_RS18855 PF02801 Beta-ketoacyl synthase, C-terminal domain JM952_RS18860 PF01432 Peptidase family M3 JM952_RS18865 PF00291 Pyridoxal-phosphate dependent enzyme JM952_RS18875 PF00394 Multicopper oxidase JM952_RS18875 PF07731 Multicopper oxidase JM952_RS18875 PF07732 Multicopper oxidase JM952_RS18880 PF05275 Copper resistance protein B precursor (CopB) JM952_RS18885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JM952_RS18915 PF01380 SIS domain JM952_RS18920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS18925 PF00005 ABC transporter JM952_RS18930 PF00005 ABC transporter JM952_RS18930 PF02687 FtsX-like permease family JM952_RS18930 PF12704 MacB-like periplasmic core domain JM952_RS18935 PF00005 ABC transporter JM952_RS18935 PF02687 FtsX-like permease family JM952_RS18935 PF12704 MacB-like periplasmic core domain JM952_RS18950 PF00672 HAMP domain JM952_RS18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS18950 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS18975 PF14602 Hexapeptide repeat of succinyl-transferase JM952_RS18975 PF12804 MobA-like NTP transferase domain JM952_RS18975 PF00132 Bacterial transferase hexapeptide (six repeats) JM952_RS18990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JM952_RS18990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JM952_RS18995 PF02874 ATP synthase alpha/beta family, beta-barrel domain JM952_RS18995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM952_RS19000 PF00231 ATP synthase JM952_RS19005 PF02874 ATP synthase alpha/beta family, beta-barrel domain JM952_RS19005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM952_RS19005 PF00306 ATP synthase alpha/beta chain, C terminal domain JM952_RS19010 PF00213 ATP synthase delta (OSCP) subunit JM952_RS19015 PF00430 ATP synthase B/B' CF(0) JM952_RS19020 PF00137 ATP synthase subunit C JM952_RS19025 PF00119 ATP synthase A chain JM952_RS19040 PF01979 Amidohydrolase family JM952_RS19045 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS19045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM952_RS19055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JM952_RS19055 PF00364 Biotin-requiring enzyme JM952_RS19055 PF02817 e3 binding domain JM952_RS19090 PF03180 NLPA lipoprotein JM952_RS19095 PF00528 Binding-protein-dependent transport system inner membrane component JM952_RS19100 PF00005 ABC transporter JM952_RS19100 PF09383 NIL domain JM952_RS19105 PF00892 EamA-like transporter family JM952_RS19110 PF04461 Protein of unknown function (DUF520) JM952_RS19135 PF13419 Haloacid dehalogenase-like hydrolase JM952_RS19140 PF00849 RNA pseudouridylate synthase JM952_RS19140 PF01479 S4 domain JM952_RS19145 PF08468 Methyltransferase small domain N-terminal JM952_RS19145 PF05175 Methyltransferase small domain JM952_RS19155 PF07995 Glucose / Sorbosone dehydrogenase JM952_RS19165 PF00672 HAMP domain JM952_RS19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS19165 PF18698 Histidine kinase sensor domain JM952_RS19165 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS19165 PF00989 PAS fold JM952_RS19185 PF00842 Alanine racemase, C-terminal domain JM952_RS19185 PF01168 Alanine racemase, N-terminal domain JM952_RS19190 PF01266 FAD dependent oxidoreductase JM952_RS19195 PF01037 Lrp/AsnC ligand binding domain JM952_RS19205 PF01641 SelR domain JM952_RS19215 PF01618 MotA/TolQ/ExbB proton channel family JM952_RS19220 PF13677 Membrane MotB of proton-channel complex MotA/MotB JM952_RS19220 PF00691 OmpA family JM952_RS19245 PF01061 ABC-2 type transporter JM952_RS19250 PF00005 ABC transporter JM952_RS19255 PF00999 Sodium/hydrogen exchanger family JM952_RS19260 PF03795 YCII-related domain JM952_RS19265 PF02469 Fasciclin domain JM952_RS19270 PF03167 Uracil DNA glycosylase superfamily JM952_RS19280 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JM952_RS19285 PF03466 LysR substrate binding domain JM952_RS19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS19290 PF03358 NADPH-dependent FMN reductase JM952_RS19295 PF00248 Aldo/keto reductase family JM952_RS19305 PF01431 Peptidase family M13 JM952_RS19305 PF05649 Peptidase family M13 JM952_RS19320 PF13520 Amino acid permease JM952_RS19330 PF00072 Response regulator receiver domain JM952_RS19330 PF04397 LytTr DNA-binding domain JM952_RS19335 PF02743 Cache domain JM952_RS19335 PF00672 HAMP domain JM952_RS19335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS19335 PF06580 Histidine kinase JM952_RS19355 PF00857 Isochorismatase family JM952_RS19360 PF05974 Domain of unknown function (DUF892) JM952_RS19365 PF05974 Domain of unknown function (DUF892) JM952_RS19370 PF05067 Manganese containing catalase JM952_RS19385 PF01339 CheB methylesterase JM952_RS19385 PF01739 CheR methyltransferase, SAM binding domain JM952_RS19385 PF03705 CheR methyltransferase, all-alpha domain JM952_RS19385 PF08448 PAS fold JM952_RS19400 PF02954 Bacterial regulatory protein, Fis family JM952_RS19400 PF00072 Response regulator receiver domain JM952_RS19400 PF00158 Sigma-54 interaction domain JM952_RS19410 PF01654 Cytochrome bd terminal oxidase subunit I JM952_RS19415 PF02322 Cytochrome bd terminal oxidase subunit II JM952_RS19445 PF03275 UDP-galactopyranose mutase JM952_RS19455 PF00005 ABC transporter JM952_RS19455 PF00664 ABC transporter transmembrane region JM952_RS19470 PF00107 Zinc-binding dehydrogenase JM952_RS19470 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS19470 PF13823 Alcohol dehydrogenase GroES-associated JM952_RS19540 PF07715 TonB-dependent Receptor Plug Domain JM952_RS19540 PF00593 TonB dependent receptor JM952_RS19555 PF00005 ABC transporter JM952_RS19565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS19565 PF03466 LysR substrate binding domain JM952_RS19570 PF01042 Endoribonuclease L-PSP JM952_RS19590 PF00248 Aldo/keto reductase family JM952_RS19595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS19595 PF03466 LysR substrate binding domain JM952_RS19615 PF00563 EAL domain JM952_RS19615 PF01590 GAF domain JM952_RS19615 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS19615 PF00360 Phytochrome region JM952_RS19645 PF04546 Sigma-70, non-essential region JM952_RS19645 PF03979 Sigma-70 factor, region 1.1 JM952_RS19645 PF00140 Sigma-70 factor, region 1.2 JM952_RS19645 PF04542 Sigma-70 region 2 JM952_RS19645 PF04539 Sigma-70 region 3 JM952_RS19645 PF04545 Sigma-70, region 4 JM952_RS19650 PF02580 D-Tyr-tRNA(Tyr) deacylase JM952_RS19655 PF03279 Bacterial lipid A biosynthesis acyltransferase JM952_RS19665 PF00925 GTP cyclohydrolase II JM952_RS19685 PF00535 Glycosyl transferase family 2 JM952_RS19700 PF01189 16S rRNA methyltransferase RsmB/F JM952_RS19700 PF01029 NusB family JM952_RS19705 PF02911 Formyl transferase, C-terminal domain JM952_RS19705 PF00551 Formyl transferase JM952_RS19710 PF01327 Polypeptide deformylase JM952_RS19715 PF01476 LysM domain JM952_RS19720 PF02481 DNA recombination-mediator protein A JM952_RS19720 PF17782 DprA winged helix domain JM952_RS19725 PF04361 Protein of unknown function (DUF494) JM952_RS19730 PF00114 Pilin (bacterial filament) JM952_RS19730 PF07963 Prokaryotic N-terminal methylation motif JM952_RS19740 PF01131 DNA topoisomerase JM952_RS19740 PF01751 Toprim domain JM952_RS19740 PF13368 Topoisomerase C-terminal repeat JM952_RS19745 PF01300 Telomere recombination JM952_RS19760 PF01590 GAF domain JM952_RS19760 PF00563 EAL domain JM952_RS19760 PF00360 Phytochrome region JM952_RS19760 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS19775 PF01343 Peptidase family S49 JM952_RS19780 PF01554 MatE JM952_RS19795 PF00270 DEAD/DEAH box helicase JM952_RS19795 PF17764 3′ DNA-binding domain (3′BD) JM952_RS19795 PF00271 Helicase conserved C-terminal domain JM952_RS19795 PF18074 Primosomal protein N C-terminal domain JM952_RS19795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JM952_RS19800 PF00043 Glutathione S-transferase, C-terminal domain JM952_RS19800 PF13417 Glutathione S-transferase, N-terminal domain JM952_RS19815 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS19820 PF03458 UPF0126 domain JM952_RS19825 PF04542 Sigma-70 region 2 JM952_RS19825 PF04545 Sigma-70, region 4 JM952_RS19830 PF03167 Uracil DNA glycosylase superfamily JM952_RS19835 PF00072 Response regulator receiver domain JM952_RS19835 PF01339 CheB methylesterase JM952_RS19840 PF18075 FtsX extracellular domain JM952_RS19845 PF00005 ABC transporter JM952_RS19850 PF00271 Helicase conserved C-terminal domain JM952_RS19850 PF12300 ATP-dependent RNA helicase RhlB JM952_RS19850 PF00270 DEAD/DEAH box helicase JM952_RS19855 PF00085 Thioredoxin JM952_RS19860 PF07497 Rho termination factor, RNA-binding domain JM952_RS19860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JM952_RS19860 PF07498 Rho termination factor, N-terminal domain JM952_RS19870 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JM952_RS19875 PF03466 LysR substrate binding domain JM952_RS19875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS19885 PF03971 Monomeric isocitrate dehydrogenase JM952_RS19895 PF00756 Putative esterase JM952_RS19895 PF01476 LysM domain JM952_RS19900 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JM952_RS19900 PF14489 QueF-like protein JM952_RS19905 PF07687 Peptidase dimerisation domain JM952_RS19905 PF01546 Peptidase family M20/M25/M40 JM952_RS19910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS19915 PF00873 AcrB/AcrD/AcrF family JM952_RS19920 PF00873 AcrB/AcrD/AcrF family JM952_RS19940 PF04542 Sigma-70 region 2 JM952_RS19940 PF08281 Sigma-70, region 4 JM952_RS19945 PF07063 Domain of unknown function (DUF1338) JM952_RS19985 PF01427 D-ala-D-ala dipeptidase JM952_RS19990 PF01471 Putative peptidoglycan binding domain JM952_RS19990 PF04717 Type VI secretion system, phage-baseplate injector JM952_RS20005 PF01510 N-acetylmuramoyl-L-alanine amidase JM952_RS20015 PF13378 Enolase C-terminal domain-like JM952_RS20015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM952_RS20025 PF13520 Amino acid permease JM952_RS20040 PF05360 yiaA/B two helix domain JM952_RS20045 PF07995 Glucose / Sorbosone dehydrogenase JM952_RS20050 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS20050 PF14310 Fibronectin type III-like domain JM952_RS20050 PF01915 Glycosyl hydrolase family 3 C-terminal domain JM952_RS20055 PF02152 Dihydroneopterin aldolase JM952_RS20060 PF00814 Glycoprotease family JM952_RS20065 PF01165 Ribosomal protein S21 JM952_RS20070 PF09424 Yqey-like protein JM952_RS20075 PF03631 Virulence factor BrkB JM952_RS20080 PF10410 DnaB-helicase binding domain of primase JM952_RS20080 PF01807 CHC2 zinc finger JM952_RS20080 PF08278 DNA primase DnaG DnaB-binding JM952_RS20080 PF08275 DNA primase catalytic core, N-terminal domain JM952_RS20090 PF13593 SBF-like CPA transporter family (DUF4137) JM952_RS20095 PF11412 Disulphide bond corrector protein DsbC JM952_RS20095 PF02683 Cytochrome C biogenesis protein transmembrane region JM952_RS20100 PF01040 UbiA prenyltransferase family JM952_RS20125 PF00510 Cytochrome c oxidase subunit III JM952_RS20130 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JM952_RS20140 PF00115 Cytochrome C and Quinol oxidase polypeptide I JM952_RS20145 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JM952_RS20145 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JM952_RS20155 PF00171 Aldehyde dehydrogenase family JM952_RS20155 PF01619 Proline dehydrogenase JM952_RS20155 PF14850 DNA-binding domain of Proline dehydrogenase JM952_RS20155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JM952_RS20190 PF00579 tRNA synthetases class I (W and Y) JM952_RS20195 PF04225 Opacity-associated protein A LysM-like domain JM952_RS20195 PF01551 Peptidase family M23 JM952_RS20200 PF03702 Anhydro-N-acetylmuramic acid kinase JM952_RS20210 PF07690 Major Facilitator Superfamily JM952_RS20220 PF03372 Endonuclease/Exonuclease/phosphatase family JM952_RS20225 PF00156 Phosphoribosyl transferase domain JM952_RS20235 PF13614 AAA domain JM952_RS20240 PF17762 HTH domain found in ParB protein JM952_RS20240 PF02195 ParB-like nuclease domain JM952_RS20255 PF01370 NAD dependent epimerase/dehydratase family JM952_RS20260 PF00535 Glycosyl transferase family 2 JM952_RS20275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JM952_RS20275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JM952_RS20275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JM952_RS20275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JM952_RS20280 PF00692 dUTPase JM952_RS20285 PF04127 DNA / pantothenate metabolism flavoprotein JM952_RS20285 PF02441 Flavoprotein JM952_RS20290 PF04002 RadC-like JAB domain JM952_RS20295 PF03485 Arginyl tRNA synthetase N terminal domain JM952_RS20295 PF05746 DALR anticodon binding domain JM952_RS20295 PF00750 tRNA synthetases class I (R) JM952_RS20310 PF00106 short chain dehydrogenase JM952_RS20315 PF01757 Acyltransferase family JM952_RS20325 PF03033 Glycosyltransferase family 28 N-terminal domain JM952_RS20330 PF00975 Thioesterase domain JM952_RS20330 PF00550 Phosphopantetheine attachment site JM952_RS20330 PF00668 Condensation domain JM952_RS20330 PF13193 AMP-binding enzyme C-terminal domain JM952_RS20330 PF00501 AMP-binding enzyme JM952_RS20335 PF17944 Arginine decarboxylase C-terminal helical extension JM952_RS20335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JM952_RS20335 PF17810 Arginine decarboxylase helical bundle domain JM952_RS20340 PF17284 Spermidine synthase tetramerisation domain JM952_RS20355 PF00543 Nitrogen regulatory protein P-II JM952_RS20360 PF04380 Membrane fusogenic activity JM952_RS20365 PF01078 Magnesium chelatase, subunit ChlI JM952_RS20365 PF13335 Magnesium chelatase, subunit ChlI C-terminal JM952_RS20380 PF00563 EAL domain JM952_RS20380 PF12792 CSS motif domain associated with EAL JM952_RS20385 PF00487 Fatty acid desaturase JM952_RS20390 PF00970 Oxidoreductase FAD-binding domain JM952_RS20390 PF00111 2Fe-2S iron-sulfur cluster binding domain JM952_RS20390 PF00175 Oxidoreductase NAD-binding domain JM952_RS20395 PF00440 Bacterial regulatory proteins, tetR family JM952_RS20415 PF01139 tRNA-splicing ligase RtcB JM952_RS20460 PF08338 Domain of unknown function (DUF1731) JM952_RS20460 PF01370 NAD dependent epimerase/dehydratase family JM952_RS20465 PF07992 Pyridine nucleotide-disulphide oxidoreductase JM952_RS20465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JM952_RS20475 PF00072 Response regulator receiver domain JM952_RS20475 PF00486 Transcriptional regulatory protein, C terminal JM952_RS20480 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS20480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS20480 PF08521 Two-component sensor kinase N-terminal JM952_RS20500 PF00595 PDZ domain JM952_RS20520 PF01594 AI-2E family transporter JM952_RS20525 PF13419 Haloacid dehalogenase-like hydrolase JM952_RS20530 PF00883 Cytosol aminopeptidase family, catalytic domain JM952_RS20530 PF02789 Cytosol aminopeptidase family, N-terminal domain JM952_RS20550 PF00196 Bacterial regulatory proteins, luxR family JM952_RS20550 PF00072 Response regulator receiver domain JM952_RS20555 PF07730 Histidine kinase JM952_RS20560 PF13533 Biotin-lipoyl like JM952_RS20565 PF00005 ABC transporter JM952_RS20585 PF00892 EamA-like transporter family JM952_RS20590 PF00892 EamA-like transporter family JM952_RS20605 PF00753 Metallo-beta-lactamase superfamily JM952_RS20610 PF00579 tRNA synthetases class I (W and Y) JM952_RS20615 PF05532 CsbD-like JM952_RS20655 PF02223 Thymidylate kinase JM952_RS20660 PF02311 AraC-like ligand binding domain JM952_RS20660 PF12833 Helix-turn-helix domain JM952_RS20685 PF03309 Type III pantothenate kinase JM952_RS20690 PF02237 Biotin protein ligase C terminal domain JM952_RS20690 PF03099 Biotin/lipoate A/B protein ligase family JM952_RS20690 PF08279 HTH domain JM952_RS20700 PF06167 Glucose-regulated metallo-peptidase M90 JM952_RS20715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS20720 PF00072 Response regulator receiver domain JM952_RS20720 PF00486 Transcriptional regulatory protein, C terminal JM952_RS20730 PF01207 Dihydrouridine synthase (Dus) JM952_RS20750 PF00199 Catalase JM952_RS20750 PF06628 Catalase-related immune-responsive JM952_RS20755 PF13307 Helicase C-terminal domain JM952_RS20755 PF06733 DEAD_2 JM952_RS20770 PF01488 Shikimate / quinate 5-dehydrogenase JM952_RS20770 PF08501 Shikimate dehydrogenase substrate binding domain JM952_RS20770 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JM952_RS20780 PF00667 FAD binding domain JM952_RS20780 PF00258 Flavodoxin JM952_RS20780 PF00175 Oxidoreductase NAD-binding domain JM952_RS20785 PF00490 Delta-aminolevulinic acid dehydratase JM952_RS20820 PF00043 Glutathione S-transferase, C-terminal domain JM952_RS20820 PF02798 Glutathione S-transferase, N-terminal domain JM952_RS20840 PF04820 Tryptophan halogenase JM952_RS20860 PF00005 ABC transporter JM952_RS20870 PF01381 Helix-turn-helix JM952_RS20880 PF02583 Metal-sensitive transcriptional repressor JM952_RS20885 PF01545 Cation efflux family JM952_RS20890 PF01229 Glycosyl hydrolases family 39 JM952_RS20895 PF01383 CpcD/allophycocyanin linker domain JM952_RS20895 PF00175 Oxidoreductase NAD-binding domain JM952_RS20900 PF00005 ABC transporter JM952_RS20905 PF01061 ABC-2 type transporter JM952_RS20915 PF02558 Ketopantoate reductase PanE/ApbA JM952_RS20915 PF08546 Ketopantoate reductase PanE/ApbA C terminal JM952_RS20930 PF03061 Thioesterase superfamily JM952_RS20945 PF00268 Ribonucleotide reductase, small chain JM952_RS20950 PF02867 Ribonucleotide reductase, barrel domain JM952_RS20950 PF00317 Ribonucleotide reductase, all-alpha domain JM952_RS20950 PF03477 ATP cone domain JM952_RS20960 PF00583 Acetyltransferase (GNAT) family JM952_RS20960 PF13380 CoA binding domain JM952_RS20960 PF13607 Succinyl-CoA ligase like flavodoxin domain JM952_RS20970 PF00571 CBS domain JM952_RS20970 PF03448 MgtE intracellular N domain JM952_RS20970 PF01769 Divalent cation transporter JM952_RS20975 PF00194 Eukaryotic-type carbonic anhydrase JM952_RS20980 PF02254 TrkA-N domain JM952_RS20980 PF00999 Sodium/hydrogen exchanger family JM952_RS20985 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JM952_RS20985 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JM952_RS20990 PF00723 Glycosyl hydrolases family 15 JM952_RS20995 PF01451 Low molecular weight phosphotyrosine protein phosphatase JM952_RS21005 PF05166 YcgL domain JM952_RS21010 PF00109 Beta-ketoacyl synthase, N-terminal domain JM952_RS21010 PF02801 Beta-ketoacyl synthase, C-terminal domain JM952_RS21020 PF00535 Glycosyl transferase family 2 JM952_RS21025 PF04820 Tryptophan halogenase JM952_RS21085 PF00550 Phosphopantetheine attachment site JM952_RS21090 PF04820 Tryptophan halogenase JM952_RS21120 PF01218 Coproporphyrinogen III oxidase JM952_RS21125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JM952_RS21125 PF00476 DNA polymerase family A JM952_RS21125 PF01612 3'-5' exonuclease JM952_RS21125 PF01367 5'-3' exonuclease, C-terminal SAM fold JM952_RS21145 PF14602 Hexapeptide repeat of succinyl-transferase JM952_RS21145 PF12464 Maltose acetyltransferase JM952_RS21155 PF00580 UvrD/REP helicase N-terminal domain JM952_RS21155 PF13361 UvrD-like helicase C-terminal domain JM952_RS21165 PF13396 Phospholipase_D-nuclease N-terminal JM952_RS21165 PF13091 PLD-like domain JM952_RS21170 PF03466 LysR substrate binding domain JM952_RS21170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS21175 PF03737 Aldolase/RraA JM952_RS21180 PF04303 PrpF protein JM952_RS21185 PF04909 Amidohydrolase JM952_RS21190 PF00471 Ribosomal protein L33 JM952_RS21195 PF00830 Ribosomal L28 family JM952_RS21205 PF00873 AcrB/AcrD/AcrF family JM952_RS21215 PF00529 HlyD membrane-fusion protein of T1SS JM952_RS21215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS21235 PF02527 rRNA small subunit methyltransferase G JM952_RS21240 PF09423 PhoD-like phosphatase JM952_RS21240 PF16655 PhoD-like phosphatase, N-terminal domain JM952_RS21250 PF13936 Helix-turn-helix domain JM952_RS21250 PF00665 Integrase core domain JM952_RS21255 PF04222 Protein of unknown function (DUF416) JM952_RS21300 PF01648 4'-phosphopantetheinyl transferase superfamily JM952_RS21305 PF04226 Transglycosylase associated protein JM952_RS21350 PF00480 ROK family JM952_RS21360 PF00639 PPIC-type PPIASE domain JM952_RS21360 PF09312 SurA N-terminal domain JM952_RS21375 PF00474 Sodium:solute symporter family JM952_RS21380 PF04341 Protein of unknown function, DUF485 JM952_RS21390 PF16177 Acetyl-coenzyme A synthetase N-terminus JM952_RS21390 PF00501 AMP-binding enzyme JM952_RS21390 PF13193 AMP-binding enzyme C-terminal domain JM952_RS21395 PF00196 Bacterial regulatory proteins, luxR family JM952_RS21395 PF00072 Response regulator receiver domain JM952_RS21415 PF04616 Glycosyl hydrolases family 43 JM952_RS21415 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JM952_RS21420 PF00248 Aldo/keto reductase family JM952_RS21435 PF01557 Fumarylacetoacetate (FAA) hydrolase family JM952_RS21440 PF13378 Enolase C-terminal domain-like JM952_RS21440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM952_RS21445 PF05336 L-rhamnose mutarotase JM952_RS21450 PF07690 Major Facilitator Superfamily JM952_RS21455 PF01614 Bacterial transcriptional regulator JM952_RS21455 PF09339 IclR helix-turn-helix domain JM952_RS21470 PF02659 Putative manganese efflux pump JM952_RS21475 PF09456 RcsC Alpha-Beta-Loop (ABL) JM952_RS21475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS21475 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS21475 PF00072 Response regulator receiver domain JM952_RS21480 PF06165 Glycosyltransferase family 36 JM952_RS21480 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JM952_RS21495 PF13360 PQQ-like domain JM952_RS21495 PF13570 PQQ-like domain JM952_RS21495 PF01011 PQQ enzyme repeat JM952_RS21520 PF04357 TamB, inner membrane protein subunit of TAM complex JM952_RS21525 PF01103 Surface antigen JM952_RS21525 PF17243 POTRA domain TamA domain 1 JM952_RS21530 PF05746 DALR anticodon binding domain JM952_RS21530 PF02092 Glycyl-tRNA synthetase beta subunit JM952_RS21535 PF02091 Glycyl-tRNA synthetase alpha subunit JM952_RS21540 PF00437 Type II/IV secretion system protein JM952_RS21540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JM952_RS21545 PF00117 Glutamine amidotransferase class-I JM952_RS21545 PF00958 GMP synthase C terminal domain JM952_RS21555 PF00902 Sec-independent protein translocase protein (TatC) JM952_RS21560 PF02416 mttA/Hcf106 family JM952_RS21565 PF02416 mttA/Hcf106 family JM952_RS21575 PF00762 Ferrochelatase JM952_RS21580 PF12697 Alpha/beta hydrolase family JM952_RS21590 PF04381 Putative exonuclease, RdgC JM952_RS21595 PF01171 PP-loop family JM952_RS21605 PF00356 Bacterial regulatory proteins, lacI family JM952_RS21610 PF07477 Glycosyl hydrolase family 67 C-terminus JM952_RS21610 PF07488 Glycosyl hydrolase family 67 middle domain JM952_RS21610 PF03648 Glycosyl hydrolase family 67 N-terminus JM952_RS21620 PF13378 Enolase C-terminal domain-like JM952_RS21620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JM952_RS21625 PF04616 Glycosyl hydrolases family 43 JM952_RS21625 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JM952_RS21630 PF07691 PA14 domain JM952_RS21630 PF01915 Glycosyl hydrolase family 3 C-terminal domain JM952_RS21630 PF00933 Glycosyl hydrolase family 3 N terminal domain JM952_RS21630 PF14310 Fibronectin type III-like domain JM952_RS21635 PF01232 Mannitol dehydrogenase Rossmann domain JM952_RS21635 PF08125 Mannitol dehydrogenase C-terminal domain JM952_RS21675 PF08450 SMP-30/Gluconolactonase/LRE-like region JM952_RS21685 PF00331 Glycosyl hydrolase family 10 JM952_RS21690 PF02837 Glycosyl hydrolases family 2, sugar binding domain JM952_RS21690 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JM952_RS21690 PF00703 Glycosyl hydrolases family 2 JM952_RS21690 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JM952_RS21690 PF16355 Domain of unknown function (DUF4982) JM952_RS21695 PF02614 Glucuronate isomerase JM952_RS21700 PF00331 Glycosyl hydrolase family 10 JM952_RS21700 PF03422 Carbohydrate binding module (family 6) JM952_RS21700 PF00553 Cellulose binding domain JM952_RS21720 PF04616 Glycosyl hydrolases family 43 JM952_RS21750 PF00698 Acyl transferase domain JM952_RS21750 PF16197 Ketoacyl-synthetase C-terminal extension JM952_RS21750 PF00109 Beta-ketoacyl synthase, N-terminal domain JM952_RS21750 PF02801 Beta-ketoacyl synthase, C-terminal domain JM952_RS21750 PF08659 KR domain JM952_RS21750 PF00550 Phosphopantetheine attachment site JM952_RS21750 PF14765 Polyketide synthase dehydratase JM952_RS21750 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS21750 PF00107 Zinc-binding dehydrogenase JM952_RS21755 PF01553 Acyltransferase JM952_RS21765 PF00356 Bacterial regulatory proteins, lacI family JM952_RS21780 PF04820 Tryptophan halogenase JM952_RS21785 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JM952_RS21790 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JM952_RS21795 PF04337 Protein of unknown function, DUF480 JM952_RS21805 PF13302 Acetyltransferase (GNAT) domain JM952_RS21810 PF00580 UvrD/REP helicase N-terminal domain JM952_RS21810 PF13361 UvrD-like helicase C-terminal domain JM952_RS21840 PF00265 Thymidine kinase JM952_RS21845 PF00360 Phytochrome region JM952_RS21845 PF08446 PAS fold JM952_RS21845 PF00512 His Kinase A (phospho-acceptor) domain JM952_RS21845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JM952_RS21845 PF01590 GAF domain JM952_RS21850 PF04349 Periplasmic glucan biosynthesis protein, MdoG JM952_RS21865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JM952_RS21865 PF06827 Zinc finger found in FPG and IleRS JM952_RS21865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JM952_RS21895 PF03594 Benzoate membrane transport protein JM952_RS21905 PF13426 PAS domain JM952_RS21905 PF00360 Phytochrome region JM952_RS21905 PF08446 PAS fold JM952_RS21905 PF01590 GAF domain JM952_RS21910 PF01126 Heme oxygenase JM952_RS21915 PF07690 Major Facilitator Superfamily JM952_RS21920 PF01263 Aldose 1-epimerase JM952_RS21930 PF02810 SEC-C motif JM952_RS21940 PF01925 Sulfite exporter TauE/SafE JM952_RS21945 PF00593 TonB dependent receptor JM952_RS21945 PF07715 TonB-dependent Receptor Plug Domain JM952_RS21970 PF01227 GTP cyclohydrolase I JM952_RS21980 PF07869 Protein of unknown function (DUF1656) JM952_RS21985 PF00529 HlyD membrane-fusion protein of T1SS JM952_RS21985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JM952_RS21990 PF02321 Outer membrane efflux protein JM952_RS21995 PF04632 Fusaric acid resistance protein family JM952_RS22000 PF00083 Sugar (and other) transporter JM952_RS22015 PF00106 short chain dehydrogenase JM952_RS22020 PF13091 PLD-like domain JM952_RS22020 PF13396 Phospholipase_D-nuclease N-terminal JM952_RS22095 PF00849 RNA pseudouridylate synthase JM952_RS22110 PF13614 AAA domain JM952_RS22140 PF01381 Helix-turn-helix JM952_RS22145 PF13538 UvrD-like helicase C-terminal domain JM952_RS22150 PF12705 PD-(D/E)XK nuclease superfamily JM952_RS22150 PF00580 UvrD/REP helicase N-terminal domain JM952_RS22150 PF13361 UvrD-like helicase C-terminal domain JM952_RS22155 PF17946 RecC C-terminal domain JM952_RS22190 PF00005 ABC transporter JM952_RS22195 PF02405 Permease MlaE JM952_RS22200 PF02470 MlaD protein JM952_RS22205 PF05494 MlaC protein JM952_RS22215 PF04333 MlaA lipoprotein JM952_RS22225 PF00255 Glutathione peroxidase JM952_RS22235 PF02646 RmuC family JM952_RS22245 PF08240 Alcohol dehydrogenase GroES-like domain JM952_RS22245 PF00107 Zinc-binding dehydrogenase JM952_RS22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JM952_RS22250 PF03466 LysR substrate binding domain JM952_RS22265 PF13520 Amino acid permease JM952_RS22275 PF07715 TonB-dependent Receptor Plug Domain JM952_RS22275 PF00593 TonB dependent receptor JM952_RS22280 PF10947 Protein of unknown function (DUF2628) JM952_RS22285 PF00990 Diguanylate cyclase, GGDEF domain JM952_RS22290 PF05651 Putative sugar diacid recognition JM952_RS22290 PF17853 GGDEF-like domain JM952_RS22290 PF13556 PucR C-terminal helix-turn-helix domain JM952_RS22295 PF02595 Glycerate kinase family JM952_RS22300 PF07690 Major Facilitator Superfamily JM952_RS22320 PF17785 PUA-like domain JM952_RS22320 PF10672 S-adenosylmethionine-dependent methyltransferase JM952_RS22325 PF03741 Integral membrane protein TerC family JM952_RS22330 PF01694 Rhomboid family JM952_RS22350 PF03009 Glycerophosphoryl diester phosphodiesterase family JM952_RS22365 PF01569 PAP2 superfamily JM952_RS22370 PF00593 TonB dependent receptor JM952_RS22375 PF01926 50S ribosome-binding GTPase JM952_RS22375 PF12631 MnmE helical domain JM952_RS22375 PF10396 GTP-binding protein TrmE N-terminus JM952_RS22380 PF01522 Polysaccharide deacetylase JM952_RS22385 PF02096 60Kd inner membrane protein JM952_RS22385 PF14849 YidC periplasmic domain JM952_RS22390 PF00825 Ribonuclease P JM952_RS22395 PF00468 Ribosomal protein L34