locus-tag class description XC_RS00005 PF11638 DnaA N-terminal domain XC_RS00005 PF00308 Bacterial dnaA protein XC_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix XC_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain XC_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain XC_RS00010 PF02767 DNA polymerase III beta subunit, central domain XC_RS00015 PF02463 RecF/RecN/SMC N terminal domain XC_RS00020 PF18053 DNA gyrase B subunit insert domain XC_RS00020 PF01751 Toprim domain XC_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus XC_RS00020 PF00204 DNA gyrase B XC_RS00030 PF01435 Peptidase family M48 XC_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal XC_RS00045 PF01618 MotA/TolQ/ExbB proton channel family XC_RS00050 PF02472 Biopolymer transport protein ExbD/TolR XC_RS00055 PF02472 Biopolymer transport protein ExbD/TolR XC_RS00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XC_RS00070 PF13091 PLD-like domain XC_RS00070 PF13396 Phospholipase_D-nuclease N-terminal XC_RS00075 PF04055 Radical SAM superfamily XC_RS00090 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XC_RS00105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XC_RS00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XC_RS00105 PF01842 ACT domain XC_RS00110 PF13180 PDZ domain XC_RS00110 PF03572 Peptidase family S41 XC_RS00115 PF01551 Peptidase family M23 XC_RS00125 PF04389 Peptidase family M28 XC_RS00135 PF00150 Cellulase (glycosyl hydrolase family 5) XC_RS00140 PF00150 Cellulase (glycosyl hydrolase family 5) XC_RS00145 PF00150 Cellulase (glycosyl hydrolase family 5) XC_RS00150 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS00150 PF00107 Zinc-binding dehydrogenase XC_RS00160 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS00160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XC_RS00165 PF01493 GXGXG motif XC_RS00165 PF00310 Glutamine amidotransferases class-II XC_RS00165 PF04898 Glutamate synthase central domain XC_RS00165 PF01645 Conserved region in glutamate synthase XC_RS00180 PF00398 Ribosomal RNA adenine dimethylase XC_RS00190 PF05726 Pirin C-terminal cupin domain XC_RS00190 PF02678 Pirin XC_RS00195 PF02525 Flavodoxin-like fold XC_RS00200 PF03466 LysR substrate binding domain XC_RS00200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS00215 PF03466 LysR substrate binding domain XC_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS00270 PF00271 Helicase conserved C-terminal domain XC_RS00270 PF09369 Domain of unknown function (DUF1998) XC_RS00270 PF00270 DEAD/DEAH box helicase XC_RS00275 PF02661 Fic/DOC family XC_RS00275 PF13784 Fic/DOC family N-terminal XC_RS00280 PF03006 Haemolysin-III related XC_RS00300 PF02525 Flavodoxin-like fold XC_RS00310 PF01638 HxlR-like helix-turn-helix XC_RS00315 PF13614 AAA domain XC_RS00355 PF01872 RibD C-terminal domain XC_RS00360 PF05532 CsbD-like XC_RS00365 PF00196 Bacterial regulatory proteins, luxR family XC_RS00365 PF00072 Response regulator receiver domain XC_RS00395 PF01447 Thermolysin metallopeptidase, catalytic domain XC_RS00395 PF16485 Protealysin propeptide XC_RS00395 PF02868 Thermolysin metallopeptidase, alpha-helical domain XC_RS00405 PF00293 NUDIX domain XC_RS00405 PF13344 Haloacid dehalogenase-like hydrolase XC_RS00410 PF01594 AI-2E family transporter XC_RS00415 PF07859 alpha/beta hydrolase fold XC_RS00425 PF00085 Thioredoxin XC_RS00430 PF08946 Osmosensory transporter coiled coil XC_RS00430 PF00083 Sugar (and other) transporter XC_RS00470 PF07726 ATPase family associated with various cellular activities (AAA) XC_RS00470 PF17863 AAA lid domain XC_RS00500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XC_RS00505 PF00155 Aminotransferase class I and II XC_RS00510 PF07715 TonB-dependent Receptor Plug Domain XC_RS00510 PF00593 TonB dependent receptor XC_RS00525 PF00171 Aldehyde dehydrogenase family XC_RS00540 PF02735 Ku70/Ku80 beta-barrel domain XC_RS00545 PF04679 ATP dependent DNA ligase C terminal region XC_RS00545 PF01068 ATP dependent DNA ligase domain XC_RS00545 PF13298 DNA polymerase Ligase (LigD) XC_RS00550 PF01070 FMN-dependent dehydrogenase XC_RS00555 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family XC_RS00560 PF07730 Histidine kinase XC_RS00565 PF00072 Response regulator receiver domain XC_RS00565 PF00196 Bacterial regulatory proteins, luxR family XC_RS00590 PF00486 Transcriptional regulatory protein, C terminal XC_RS00590 PF18500 CadC C-terminal domain 1 XC_RS00595 PF12241 Trans-2-enoyl-CoA reductase catalytic region XC_RS00595 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XC_RS00595 PF07055 Enoyl reductase FAD binding domain XC_RS00610 PF00294 pfkB family carbohydrate kinase XC_RS00625 PF01095 Pectinesterase XC_RS00655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XC_RS00660 PF01609 Transposase DDE domain XC_RS00660 PF05598 Transposase domain (DUF772) XC_RS00680 PF05598 Transposase domain (DUF772) XC_RS00700 PF11896 Domain of unknown function (DUF3416) XC_RS00700 PF00128 Alpha amylase, catalytic domain XC_RS00705 PF00128 Alpha amylase, catalytic domain XC_RS00705 PF16657 Maltogenic Amylase, C-terminal domain XC_RS00710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XC_RS00710 PF02806 Alpha amylase, C-terminal all-beta domain XC_RS00710 PF00128 Alpha amylase, catalytic domain XC_RS00745 PF00248 Aldo/keto reductase family XC_RS00750 PF13472 GDSL-like Lipase/Acylhydrolase family XC_RS00755 PF00135 Carboxylesterase family XC_RS00760 PF07859 alpha/beta hydrolase fold XC_RS00760 PF13472 GDSL-like Lipase/Acylhydrolase family XC_RS00770 PF03480 Bacterial extracellular solute-binding protein, family 7 XC_RS00780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component XC_RS00785 PF04616 Glycosyl hydrolases family 43 XC_RS00785 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XC_RS00790 PF00356 Bacterial regulatory proteins, lacI family XC_RS00795 PF04962 KduI/IolB family XC_RS00810 PF00657 GDSL-like Lipase/Acylhydrolase XC_RS00820 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XC_RS00825 PF01037 Lrp/AsnC ligand binding domain XC_RS00830 PF00593 TonB dependent receptor XC_RS00830 PF07660 Secretin and TonB N terminus short domain XC_RS00830 PF07715 TonB-dependent Receptor Plug Domain XC_RS00835 PF01734 Patatin-like phospholipase XC_RS00845 PF00005 ABC transporter XC_RS00860 PF00005 ABC transporter XC_RS00860 PF00571 CBS domain XC_RS00865 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS00875 PF03781 Sulfatase-modifying factor enzyme 1 XC_RS00875 PF12867 DinB superfamily XC_RS00880 PF10017 Histidine-specific methyltransferase, SAM-dependent XC_RS00910 PF10609 NUBPL iron-transfer P-loop NTPase XC_RS00910 PF01883 Iron-sulfur cluster assembly protein XC_RS00915 PF00300 Histidine phosphatase superfamily (branch 1) XC_RS00920 PF04264 YceI-like domain XC_RS00925 PF13091 PLD-like domain XC_RS00930 PF03061 Thioesterase superfamily XC_RS00950 PF01161 Phosphatidylethanolamine-binding protein XC_RS00960 PF02673 Bacitracin resistance protein BacA XC_RS00965 PF03951 Glutamine synthetase, beta-Grasp domain XC_RS00965 PF00120 Glutamine synthetase, catalytic domain XC_RS00970 PF00543 Nitrogen regulatory protein P-II XC_RS00975 PF00909 Ammonium Transporter Family XC_RS00980 PF00512 His Kinase A (phospho-acceptor) domain XC_RS00980 PF00989 PAS fold XC_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS00985 PF02954 Bacterial regulatory protein, Fis family XC_RS00985 PF00158 Sigma-54 interaction domain XC_RS00985 PF00072 Response regulator receiver domain XC_RS00995 PF00080 Copper/zinc superoxide dismutase (SODC) XC_RS01000 PF00080 Copper/zinc superoxide dismutase (SODC) XC_RS01005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XC_RS01015 PF00108 Thiolase, N-terminal domain XC_RS01015 PF02803 Thiolase, C-terminal domain XC_RS01055 PF00581 Rhodanese-like domain XC_RS01060 PF02556 Preprotein translocase subunit SecB XC_RS01065 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XC_RS01065 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XC_RS01075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XC_RS01075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XC_RS01075 PF00205 Thiamine pyrophosphate enzyme, central domain XC_RS01090 PF00588 SpoU rRNA Methylase family XC_RS01105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XC_RS01105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XC_RS01110 PF13784 Fic/DOC family N-terminal XC_RS01110 PF02661 Fic/DOC family XC_RS01115 PF01555 DNA methylase XC_RS01125 PF00561 alpha/beta hydrolase fold XC_RS01130 PF03692 Putative zinc- or iron-chelating domain XC_RS01140 PF00501 AMP-binding enzyme XC_RS01145 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XC_RS01160 PF01820 D-ala D-ala ligase N-terminus XC_RS01160 PF07478 D-ala D-ala ligase C-terminus XC_RS01170 PF03109 ABC1 family XC_RS01175 PF00849 RNA pseudouridylate synthase XC_RS01185 PF00472 RF-1 domain XC_RS01195 PF01112 Asparaginase XC_RS01200 PF01432 Peptidase family M3 XC_RS01210 PF12706 Beta-lactamase superfamily domain XC_RS01230 PF12833 Helix-turn-helix domain XC_RS01235 PF03466 LysR substrate binding domain XC_RS01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS01240 PF01274 Malate synthase XC_RS01245 PF00463 Isocitrate lyase family XC_RS01250 PF00990 Diguanylate cyclase, GGDEF domain XC_RS01270 PF00326 Prolyl oligopeptidase family XC_RS01275 PF02785 Biotin carboxylase C-terminal domain XC_RS01275 PF18140 Propionyl-coenzyme A carboxylase BT domain XC_RS01275 PF00289 Biotin carboxylase, N-terminal domain XC_RS01275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XC_RS01275 PF00364 Biotin-requiring enzyme XC_RS01285 PF01039 Carboxyl transferase domain XC_RS01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS01290 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS01290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS01330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XC_RS01345 PF07683 Cobalamin synthesis protein cobW C-terminal domain XC_RS01345 PF02492 CobW/HypB/UreG, nucleotide-binding domain XC_RS01365 PF03969 AFG1-like ATPase XC_RS01375 PF01047 MarR family XC_RS01380 PF02566 OsmC-like protein XC_RS01390 PF07859 alpha/beta hydrolase fold XC_RS01405 PF00248 Aldo/keto reductase family XC_RS01410 PF16884 N-terminal domain of oxidoreductase XC_RS01410 PF00107 Zinc-binding dehydrogenase XC_RS01415 PF00248 Aldo/keto reductase family XC_RS01425 PF00849 RNA pseudouridylate synthase XC_RS01435 PF00270 DEAD/DEAH box helicase XC_RS01435 PF08482 ATP-dependent helicase C-terminal XC_RS01435 PF00271 Helicase conserved C-terminal domain XC_RS01435 PF04408 Helicase associated domain (HA2) XC_RS01440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS01440 PF00672 HAMP domain XC_RS01440 PF02203 Tar ligand binding domain homologue XC_RS01445 PF07308 Protein of unknown function (DUF1456) XC_RS01450 PF00576 HIUase/Transthyretin family XC_RS01455 PF13454 FAD-NAD(P)-binding XC_RS01475 PF00266 Aminotransferase class-V XC_RS01480 PF01546 Peptidase family M20/M25/M40 XC_RS01480 PF07687 Peptidase dimerisation domain XC_RS01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS01485 PF03466 LysR substrate binding domain XC_RS01500 PF07690 Major Facilitator Superfamily XC_RS01505 PF03372 Endonuclease/Exonuclease/phosphatase family XC_RS01510 PF13091 PLD-like domain XC_RS01520 PF01425 Amidase XC_RS01525 PF01156 Inosine-uridine preferring nucleoside hydrolase XC_RS01535 PF00860 Permease family XC_RS01540 PF00111 2Fe-2S iron-sulfur cluster binding domain XC_RS01545 PF00355 Rieske [2Fe-2S] domain XC_RS01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS01550 PF03466 LysR substrate binding domain XC_RS01555 PF01026 TatD related DNase XC_RS01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS01565 PF03466 LysR substrate binding domain XC_RS01570 PF07690 Major Facilitator Superfamily XC_RS01590 PF02146 Sir2 family XC_RS01595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XC_RS01600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XC_RS01600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XC_RS01610 PF00551 Formyl transferase XC_RS01620 PF00106 short chain dehydrogenase XC_RS01630 PF02219 Methylenetetrahydrofolate reductase XC_RS01635 PF03466 LysR substrate binding domain XC_RS01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS01640 PF03358 NADPH-dependent FMN reductase XC_RS01650 PF01717 Cobalamin-independent synthase, Catalytic domain XC_RS01650 PF08267 Cobalamin-independent synthase, N-terminal domain XC_RS01665 PF05368 NmrA-like family XC_RS01670 PF01638 HxlR-like helix-turn-helix XC_RS01680 PF00672 HAMP domain XC_RS01680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS01680 PF02203 Tar ligand binding domain homologue XC_RS01735 PF11008 Protein of unknown function (DUF2846) XC_RS01795 PF00589 Phage integrase family XC_RS01795 PF13495 Phage integrase, N-terminal SAM-like domain XC_RS01800 PF00920 Dehydratase family XC_RS01820 PF00132 Bacterial transferase hexapeptide (six repeats) XC_RS01825 PF07690 Major Facilitator Superfamily XC_RS01830 PF11871 Domain of unknown function (DUF3391) XC_RS01830 PF01966 HD domain XC_RS01850 PF00171 Aldehyde dehydrogenase family XC_RS01860 PF01494 FAD binding domain XC_RS01870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XC_RS01870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XC_RS01875 PF00230 Major intrinsic protein XC_RS01880 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XC_RS01880 PF01266 FAD dependent oxidoreductase XC_RS01885 PF08220 DeoR-like helix-turn-helix domain XC_RS01885 PF00455 DeoR C terminal sensor domain XC_RS01890 PF00111 2Fe-2S iron-sulfur cluster binding domain XC_RS01890 PF00970 Oxidoreductase FAD-binding domain XC_RS01895 PF00355 Rieske [2Fe-2S] domain XC_RS01900 PF01144 Coenzyme A transferase XC_RS01905 PF01144 Coenzyme A transferase XC_RS01910 PF00108 Thiolase, N-terminal domain XC_RS01910 PF02803 Thiolase, C-terminal domain XC_RS01915 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XC_RS01915 PF00775 Dioxygenase XC_RS01920 PF00775 Dioxygenase XC_RS01920 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XC_RS01925 PF00206 Lyase XC_RS01925 PF10397 Adenylosuccinate lyase C-terminus XC_RS01930 PF12146 Serine aminopeptidase, S33 XC_RS01935 PF02627 Carboxymuconolactone decarboxylase family XC_RS01945 PF01614 Bacterial transcriptional regulator XC_RS01945 PF09339 IclR helix-turn-helix domain XC_RS01955 PF07859 alpha/beta hydrolase fold XC_RS01960 PF10677 Protein of unknown function (DUF2490) XC_RS01965 PF13932 GidA associated domain XC_RS01965 PF01134 Glucose inhibited division protein A XC_RS01975 PF00291 Pyridoxal-phosphate dependent enzyme XC_RS01995 PF13649 Methyltransferase domain XC_RS02005 PF12697 Alpha/beta hydrolase family XC_RS02015 PF00155 Aminotransferase class I and II XC_RS02020 PF06968 Biotin and Thiamin Synthesis associated domain XC_RS02020 PF04055 Radical SAM superfamily XC_RS02030 PF01040 UbiA prenyltransferase family XC_RS02040 PF00589 Phage integrase family XC_RS02040 PF13356 Arm DNA-binding domain XC_RS02050 PF07715 TonB-dependent Receptor Plug Domain XC_RS02050 PF00593 TonB dependent receptor XC_RS02060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XC_RS02060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XC_RS02075 PF07715 TonB-dependent Receptor Plug Domain XC_RS02075 PF00593 TonB dependent receptor XC_RS02080 PF05598 Transposase domain (DUF772) XC_RS02090 PF01527 Transposase XC_RS02095 PF13683 Integrase core domain XC_RS02095 PF13276 HTH-like domain XC_RS02105 PF00924 Mechanosensitive ion channel XC_RS02105 PF12795 Mechanosensitive ion channel porin domain XC_RS02105 PF12794 Mechanosensitive ion channel inner membrane domain 1 XC_RS02110 PF00884 Sulfatase XC_RS02115 PF03109 ABC1 family XC_RS02120 PF05661 Protein of unknown function (DUF808) XC_RS02125 PF02638 Glycosyl hydrolase-like 10 XC_RS02130 PF00990 Diguanylate cyclase, GGDEF domain XC_RS02135 PF08323 Starch synthase catalytic domain XC_RS02135 PF00534 Glycosyl transferases group 1 XC_RS02140 PF00128 Alpha amylase, catalytic domain XC_RS02140 PF02806 Alpha amylase, C-terminal all-beta domain XC_RS02140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XC_RS02145 PF11941 Domain of unknown function (DUF3459) XC_RS02145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XC_RS02145 PF00128 Alpha amylase, catalytic domain XC_RS02150 PF02446 4-alpha-glucanotransferase XC_RS02155 PF00128 Alpha amylase, catalytic domain XC_RS02165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XC_RS02165 PF00128 Alpha amylase, catalytic domain XC_RS02170 PF13460 NAD(P)H-binding XC_RS02190 PF06903 VirK protein XC_RS02195 PF02321 Outer membrane efflux protein XC_RS02200 PF00440 Bacterial regulatory proteins, tetR family XC_RS02210 PF00873 AcrB/AcrD/AcrF family XC_RS02225 PF00271 Helicase conserved C-terminal domain XC_RS02225 PF00270 DEAD/DEAH box helicase XC_RS02235 PF00364 Biotin-requiring enzyme XC_RS02235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XC_RS02235 PF02817 e3 binding domain XC_RS02245 PF02780 Transketolase, C-terminal domain XC_RS02245 PF02779 Transketolase, pyrimidine binding domain XC_RS02250 PF00676 Dehydrogenase E1 component XC_RS02260 PF03301 Tryptophan 2,3-dioxygenase XC_RS02265 PF00854 POT family XC_RS02275 PF01047 MarR family XC_RS02280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XC_RS02285 PF04480 Protein of unknown function (DUF559) XC_RS02290 PF04209 homogentisate 1,2-dioxygenase XC_RS02310 PF03334 Na+/H+ antiporter subunit XC_RS02315 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) XC_RS02325 PF00361 Proton-conducting membrane transporter XC_RS02330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XC_RS02335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XC_RS02335 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter XC_RS02335 PF13244 Domain of unknown function (DUF4040) XC_RS02335 PF00361 Proton-conducting membrane transporter XC_RS02370 PF01259 SAICAR synthetase XC_RS02375 PF00684 DnaJ central domain XC_RS02375 PF01556 DnaJ C terminal domain XC_RS02375 PF00226 DnaJ domain XC_RS02385 PF00834 Ribulose-phosphate 3 epimerase family XC_RS02395 PF00781 Diacylglycerol kinase catalytic domain XC_RS02400 PF04715 Anthranilate synthase component I, N terminal region XC_RS02400 PF00425 chorismate binding enzyme XC_RS02405 PF00155 Aminotransferase class I and II XC_RS02415 PF12008 Type I restriction and modification enzyme - subunit R C terminal XC_RS02415 PF18766 SWI2/SNF2 ATPase XC_RS02415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XC_RS02435 PF12161 HsdM N-terminal domain XC_RS02435 PF02384 N-6 DNA Methylase XC_RS02440 PF00117 Glutamine amidotransferase class-I XC_RS02445 PF01613 Flavin reductase like domain XC_RS02450 PF02885 Glycosyl transferase family, helical bundle domain XC_RS02450 PF00591 Glycosyl transferase family, a/b domain XC_RS02455 PF00218 Indole-3-glycerol phosphate synthase XC_RS02465 PF00027 Cyclic nucleotide-binding domain XC_RS02465 PF00325 Bacterial regulatory proteins, crp family XC_RS02470 PF02675 S-adenosylmethionine decarboxylase XC_RS02475 PF00893 Small Multidrug Resistance protein XC_RS02480 PF03232 Ubiquinone biosynthesis protein COQ7 XC_RS02485 PF00572 Ribosomal protein L13 XC_RS02490 PF00380 Ribosomal protein S9/S16 XC_RS02505 PF00293 NUDIX domain XC_RS02515 PF00210 Ferritin-like domain XC_RS02520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XC_RS02520 PF00072 Response regulator receiver domain XC_RS02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS02520 PF00512 His Kinase A (phospho-acceptor) domain XC_RS02520 PF00672 HAMP domain XC_RS02520 PF01627 Hpt domain XC_RS02525 PF00072 Response regulator receiver domain XC_RS02525 PF00486 Transcriptional regulatory protein, C terminal XC_RS02545 PF01521 Iron-sulphur cluster biosynthesis XC_RS02550 PF09297 NADH pyrophosphatase zinc ribbon domain XC_RS02550 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XC_RS02550 PF00293 NUDIX domain XC_RS02555 PF17113 Regulatory signalling modulator protein AmpE XC_RS02555 PF03186 CobD/Cbib protein XC_RS02575 PF03466 LysR substrate binding domain XC_RS02575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS02580 PF07690 Major Facilitator Superfamily XC_RS02585 PF12805 FUSC-like inner membrane protein yccS XC_RS02590 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XC_RS02590 PF02844 Phosphoribosylglycinamide synthetase, N domain XC_RS02590 PF02843 Phosphoribosylglycinamide synthetase, C domain XC_RS02595 PF01808 AICARFT/IMPCHase bienzyme XC_RS02595 PF02142 MGS-like domain XC_RS02600 PF01066 CDP-alcohol phosphatidyltransferase XC_RS02605 PF12146 Serine aminopeptidase, S33 XC_RS02605 PF12147 Putative methyltransferase XC_RS02610 PF00782 Dual specificity phosphatase, catalytic domain XC_RS02640 PF00818 Ice nucleation protein repeat XC_RS02640 PF00818 Ice nucleation protein repeat XC_RS02645 PF02954 Bacterial regulatory protein, Fis family XC_RS02655 PF01381 Helix-turn-helix XC_RS02680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XC_RS02680 PF00289 Biotin carboxylase, N-terminal domain XC_RS02680 PF02785 Biotin carboxylase C-terminal domain XC_RS02690 PF00364 Biotin-requiring enzyme XC_RS02695 PF01220 Dehydroquinase class II XC_RS02700 PF02683 Cytochrome C biogenesis protein transmembrane region XC_RS02700 PF11412 Disulphide bond corrector protein DsbC XC_RS02705 PF03091 CutA1 divalent ion tolerance protein XC_RS02710 PF04231 Endonuclease I XC_RS02715 PF00166 Chaperonin 10 Kd subunit XC_RS02720 PF00118 TCP-1/cpn60 chaperonin family XC_RS02725 PF00176 SNF2 family N-terminal domain XC_RS02725 PF00271 Helicase conserved C-terminal domain XC_RS02730 PF13749 Putative ATP-dependent DNA helicase recG C-terminal XC_RS02730 PF00270 DEAD/DEAH box helicase XC_RS02730 PF17191 RecG wedge domain XC_RS02740 PF01738 Dienelactone hydrolase family XC_RS02760 PF00593 TonB dependent receptor XC_RS02760 PF07715 TonB-dependent Receptor Plug Domain XC_RS02770 PF01527 Transposase XC_RS02775 PF13683 Integrase core domain XC_RS02775 PF13276 HTH-like domain XC_RS02780 PF00793 DAHP synthetase I family XC_RS02790 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain XC_RS02790 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain XC_RS02805 PF08450 SMP-30/Gluconolactonase/LRE-like region XC_RS02820 PF04773 FecR protein XC_RS02820 PF16220 Domain of unknown function (DUF4880) XC_RS02825 PF07715 TonB-dependent Receptor Plug Domain XC_RS02825 PF00593 TonB dependent receptor XC_RS02825 PF07660 Secretin and TonB N terminus short domain XC_RS02845 PF03710 Glutamate-ammonia ligase adenylyltransferase XC_RS02845 PF08335 GlnD PII-uridylyltransferase XC_RS02855 PF02592 Putative vitamin uptake transporter XC_RS02875 PF00881 Nitroreductase family XC_RS02880 PF04264 YceI-like domain XC_RS02890 PF13847 Methyltransferase domain XC_RS02890 PF03551 Transcriptional regulator PadR-like family XC_RS02895 PF16957 Malonate decarboxylase, alpha subunit, transporter XC_RS02900 PF06857 Malonate decarboxylase delta subunit (MdcD) XC_RS02905 PF01039 Carboxyl transferase domain XC_RS02915 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG XC_RS02920 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase XC_RS02925 PF00698 Acyl transferase domain XC_RS02925 PF02801 Beta-ketoacyl synthase, C-terminal domain XC_RS02925 PF08659 KR domain XC_RS02925 PF00550 Phosphopantetheine attachment site XC_RS02925 PF00109 Beta-ketoacyl synthase, N-terminal domain XC_RS02925 PF16197 Ketoacyl-synthetase C-terminal extension XC_RS02935 PF07729 FCD domain XC_RS02935 PF00392 Bacterial regulatory proteins, gntR family XC_RS02970 PF07745 Glycosyl hydrolase family 53 XC_RS02975 PF00456 Transketolase, thiamine diphosphate binding domain XC_RS02975 PF17831 Pyruvate dehydrogenase E1 component middle domain XC_RS02980 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XC_RS02985 PF05598 Transposase domain (DUF772) XC_RS03020 PF13409 Glutathione S-transferase, N-terminal domain XC_RS03045 PF01433 Peptidase family M1 domain XC_RS03045 PF11838 ERAP1-like C-terminal domain XC_RS03080 PF12823 Domain of unknown function (DUF3817) XC_RS03080 PF03176 MMPL family XC_RS03090 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XC_RS03090 PF00326 Prolyl oligopeptidase family XC_RS03095 PF07759 Protein of unknown function (DUF1615) XC_RS03100 PF00990 Diguanylate cyclase, GGDEF domain XC_RS03105 PF02082 Transcriptional regulator XC_RS03115 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS03115 PF13192 Thioredoxin domain XC_RS03145 PF00892 EamA-like transporter family XC_RS03150 PF00497 Bacterial extracellular solute-binding proteins, family 3 XC_RS03160 PF03330 Lytic transglycolase XC_RS03165 PF01341 Glycosyl hydrolases family 6 XC_RS03165 PF00553 Cellulose binding domain XC_RS03165 PF00041 Fibronectin type III domain XC_RS03170 PF00324 Amino acid permease XC_RS03175 PF01544 CorA-like Mg2+ transporter protein XC_RS03190 PF01204 Trehalase XC_RS03200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XC_RS03200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XC_RS03220 PF13426 PAS domain XC_RS03220 PF08448 PAS fold XC_RS03220 PF00563 EAL domain XC_RS03220 PF00990 Diguanylate cyclase, GGDEF domain XC_RS03220 PF08447 PAS fold XC_RS03220 PF05231 MASE1 XC_RS03225 PF00672 HAMP domain XC_RS03225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS03225 PF02203 Tar ligand binding domain homologue XC_RS03230 PF00150 Cellulase (glycosyl hydrolase family 5) XC_RS03230 PF00553 Cellulose binding domain XC_RS03235 PF00916 Sulfate permease family XC_RS03235 PF01740 STAS domain XC_RS03240 PF00990 Diguanylate cyclase, GGDEF domain XC_RS03240 PF08448 PAS fold XC_RS03245 PF07715 TonB-dependent Receptor Plug Domain XC_RS03245 PF07660 Secretin and TonB N terminus short domain XC_RS03245 PF00593 TonB dependent receptor XC_RS03255 PF03600 Citrate transporter XC_RS03255 PF02080 TrkA-C domain XC_RS03260 PF13632 Glycosyl transferase family group 2 XC_RS03270 PF07694 5TMR of 5TMR-LYT XC_RS03270 PF06580 Histidine kinase XC_RS03275 PF00072 Response regulator receiver domain XC_RS03275 PF04397 LytTr DNA-binding domain XC_RS03280 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XC_RS03280 PF03900 Porphobilinogen deaminase, C-terminal domain XC_RS03305 PF00326 Prolyl oligopeptidase family XC_RS03305 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XC_RS03320 PF00155 Aminotransferase class I and II XC_RS03325 PF00326 Prolyl oligopeptidase family XC_RS03325 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XC_RS03330 PF04304 Protein of unknown function (DUF454) XC_RS03340 PF01678 Diaminopimelate epimerase XC_RS03350 PF00589 Phage integrase family XC_RS03350 PF02899 Phage integrase, N-terminal SAM-like domain XC_RS03355 PF13333 Integrase core domain XC_RS03355 PF00665 Integrase core domain XC_RS03355 PF13276 HTH-like domain XC_RS03360 PF01527 Transposase XC_RS03365 PF00227 Proteasome subunit XC_RS03370 PF10431 C-terminal, D2-small domain, of ClpB protein XC_RS03370 PF00004 ATPase family associated with various cellular activities (AAA) XC_RS03370 PF07724 AAA domain (Cdc48 subfamily) XC_RS03385 PF13673 Acetyltransferase (GNAT) domain XC_RS03390 PF13533 Biotin-lipoyl like XC_RS03400 PF01209 ubiE/COQ5 methyltransferase family XC_RS03405 PF00990 Diguanylate cyclase, GGDEF domain XC_RS03405 PF03707 Bacterial signalling protein N terminal repeat XC_RS03405 PF00563 EAL domain XC_RS03410 PF01433 Peptidase family M1 domain XC_RS03410 PF11838 ERAP1-like C-terminal domain XC_RS03425 PF13360 PQQ-like domain XC_RS03430 PF01527 Transposase XC_RS03435 PF00665 Integrase core domain XC_RS03435 PF13333 Integrase core domain XC_RS03435 PF13276 HTH-like domain XC_RS03440 PF13360 PQQ-like domain XC_RS03445 PF00497 Bacterial extracellular solute-binding proteins, family 3 XC_RS03460 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS03460 PF00107 Zinc-binding dehydrogenase XC_RS03465 PF00593 TonB dependent receptor XC_RS03465 PF07715 TonB-dependent Receptor Plug Domain XC_RS03465 PF07660 Secretin and TonB N terminus short domain XC_RS03475 PF00158 Sigma-54 interaction domain XC_RS03475 PF02954 Bacterial regulatory protein, Fis family XC_RS03475 PF01590 GAF domain XC_RS03480 PF00294 pfkB family carbohydrate kinase XC_RS03490 PF04085 rod shape-determining protein MreC XC_RS03500 PF03717 Penicillin-binding Protein dimerisation domain XC_RS03500 PF00905 Penicillin binding protein transpeptidase domain XC_RS03505 PF01098 Cell cycle protein XC_RS03510 PF02534 Type IV secretory system Conjugative DNA transfer XC_RS03515 PF01527 Transposase XC_RS03520 PF13276 HTH-like domain XC_RS03520 PF13683 Integrase core domain XC_RS03525 PF02534 Type IV secretory system Conjugative DNA transfer XC_RS03545 PF05598 Transposase domain (DUF772) XC_RS03555 PF00295 Glycosyl hydrolases family 28 XC_RS03560 PF13406 Transglycosylase SLT domain XC_RS03565 PF03330 Lytic transglycolase XC_RS03565 PF05036 Sporulation related domain XC_RS03570 PF00768 D-alanyl-D-alanine carboxypeptidase XC_RS03570 PF07943 Penicillin-binding protein 5, C-terminal domain XC_RS03585 PF04359 Protein of unknown function (DUF493) XC_RS03590 PF03099 Biotin/lipoate A/B protein ligase family XC_RS03595 PF04055 Radical SAM superfamily XC_RS03595 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XC_RS03600 PF11818 C-terminal domain of tail specific protease (DUF3340) XC_RS03600 PF00595 PDZ domain XC_RS03600 PF03572 Peptidase family S41 XC_RS03600 PF17804 Tail specific protease N-terminal domain XC_RS03610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS03610 PF03466 LysR substrate binding domain XC_RS03620 PF01467 Cytidylyltransferase-like XC_RS03620 PF00293 NUDIX domain XC_RS03655 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XC_RS03655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XC_RS03660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XC_RS03660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XC_RS03665 PF04972 BON domain XC_RS03670 PF00360 Phytochrome region XC_RS03670 PF08446 PAS fold XC_RS03670 PF00512 His Kinase A (phospho-acceptor) domain XC_RS03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS03670 PF01590 GAF domain XC_RS03675 PF00072 Response regulator receiver domain XC_RS03680 PF00512 His Kinase A (phospho-acceptor) domain XC_RS03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS03685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XC_RS03725 PF00263 Bacterial type II and III secretion system protein XC_RS03725 PF03958 Bacterial type II/III secretion system short domain XC_RS03730 PF00437 Type II/IV secretion system protein XC_RS03735 PF00482 Type II secretion system (T2SS), protein F XC_RS03740 PF08334 Type II secretion system (T2SS), protein G XC_RS03740 PF07963 Prokaryotic N-terminal methylation motif XC_RS03750 PF02501 Type II secretion system (T2SS), protein I XC_RS03750 PF07963 Prokaryotic N-terminal methylation motif XC_RS03755 PF07963 Prokaryotic N-terminal methylation motif XC_RS03755 PF11612 Type II secretion system (T2SS), protein J XC_RS03760 PF03934 Type II secretion system (T2SS), protein K XC_RS03780 PF07702 UTRA domain XC_RS03780 PF00392 Bacterial regulatory proteins, gntR family XC_RS03785 PF07690 Major Facilitator Superfamily XC_RS03790 PF00356 Bacterial regulatory proteins, lacI family XC_RS03795 PF01380 SIS domain XC_RS03800 PF01979 Amidohydrolase family XC_RS03815 PF01743 Poly A polymerase head domain XC_RS03815 PF12627 Probable RNA and SrmB- binding site of polymerase A XC_RS03815 PF01966 HD domain XC_RS03820 PF01464 Transglycosylase SLT domain XC_RS03820 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XC_RS03825 PF07715 TonB-dependent Receptor Plug Domain XC_RS03825 PF00593 TonB dependent receptor XC_RS03830 PF00732 GMC oxidoreductase XC_RS03830 PF05199 GMC oxidoreductase XC_RS03835 PF00171 Aldehyde dehydrogenase family XC_RS03840 PF02028 BCCT, betaine/carnitine/choline family transporter XC_RS03850 PF01323 DSBA-like thioredoxin domain XC_RS03860 PF00034 Cytochrome c XC_RS03865 PF01926 50S ribosome-binding GTPase XC_RS03870 PF04107 Glutamate-cysteine ligase family 2(GCS2) XC_RS03875 PF00672 HAMP domain XC_RS03875 PF00512 His Kinase A (phospho-acceptor) domain XC_RS03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS03880 PF00072 Response regulator receiver domain XC_RS03880 PF00486 Transcriptional regulatory protein, C terminal XC_RS03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS03900 PF03466 LysR substrate binding domain XC_RS03905 PF02583 Metal-sensitive transcriptional repressor XC_RS03910 PF00107 Zinc-binding dehydrogenase XC_RS03910 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS03915 PF04828 Glutathione-dependent formaldehyde-activating enzyme XC_RS03920 PF00756 Putative esterase XC_RS03925 PF00392 Bacterial regulatory proteins, gntR family XC_RS03925 PF00155 Aminotransferase class I and II XC_RS03930 PF00155 Aminotransferase class I and II XC_RS03930 PF00392 Bacterial regulatory proteins, gntR family XC_RS03935 PF02567 Phenazine biosynthesis-like protein XC_RS03940 PF00892 EamA-like transporter family XC_RS03950 PF02645 Uncharacterised protein, DegV family COG1307 XC_RS03990 PF01979 Amidohydrolase family XC_RS03995 PF01979 Amidohydrolase family XC_RS04010 PF00462 Glutaredoxin XC_RS04015 PF01522 Polysaccharide deacetylase XC_RS04030 PF00155 Aminotransferase class I and II XC_RS04040 PF03193 RsgA GTPase XC_RS04055 PF00128 Alpha amylase, catalytic domain XC_RS04070 PF00356 Bacterial regulatory proteins, lacI family XC_RS04075 PF00106 short chain dehydrogenase XC_RS04080 PF03600 Citrate transporter XC_RS04090 PF00072 Response regulator receiver domain XC_RS04090 PF00486 Transcriptional regulatory protein, C terminal XC_RS04095 PF00512 His Kinase A (phospho-acceptor) domain XC_RS04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS04095 PF08521 Two-component sensor kinase N-terminal XC_RS04110 PF00196 Bacterial regulatory proteins, luxR family XC_RS04110 PF00072 Response regulator receiver domain XC_RS04120 PF00512 His Kinase A (phospho-acceptor) domain XC_RS04120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS04130 PF00375 Sodium:dicarboxylate symporter family XC_RS04135 PF01515 Phosphate acetyl/butaryl transferase XC_RS04135 PF03949 Malic enzyme, NAD binding domain XC_RS04135 PF00390 Malic enzyme, N-terminal domain XC_RS04160 PF03279 Bacterial lipid A biosynthesis acyltransferase XC_RS04165 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XC_RS04170 PF02321 Outer membrane efflux protein XC_RS04185 PF13188 PAS domain XC_RS04185 PF03707 Bacterial signalling protein N terminal repeat XC_RS04185 PF00990 Diguanylate cyclase, GGDEF domain XC_RS04185 PF00563 EAL domain XC_RS04190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS04195 PF00330 Aconitase family (aconitate hydratase) XC_RS04200 PF00694 Aconitase C-terminal domain XC_RS04205 PF08241 Methyltransferase domain XC_RS04210 PF00180 Isocitrate/isopropylmalate dehydrogenase XC_RS04215 PF08502 LeuA allosteric (dimerisation) domain XC_RS04215 PF00682 HMGL-like XC_RS04220 PF00291 Pyridoxal-phosphate dependent enzyme XC_RS04230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XC_RS04230 PF00205 Thiamine pyrophosphate enzyme, central domain XC_RS04230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XC_RS04235 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XC_RS04235 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XC_RS04245 PF02203 Tar ligand binding domain homologue XC_RS04245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS04245 PF00672 HAMP domain XC_RS04250 PF07676 WD40-like Beta Propeller Repeat XC_RS04250 PF00326 Prolyl oligopeptidase family XC_RS04260 PF13667 ThiC-associated domain XC_RS04260 PF01964 Radical SAM ThiC family XC_RS04265 PF00486 Transcriptional regulatory protein, C terminal XC_RS04265 PF18500 CadC C-terminal domain 1 XC_RS04270 PF12833 Helix-turn-helix domain XC_RS04275 PF07715 TonB-dependent Receptor Plug Domain XC_RS04275 PF00593 TonB dependent receptor XC_RS04285 PF00719 Inorganic pyrophosphatase XC_RS04295 PF03030 Inorganic H+ pyrophosphatase XC_RS04325 PF13683 Integrase core domain XC_RS04325 PF13276 HTH-like domain XC_RS04330 PF01527 Transposase XC_RS04355 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XC_RS04370 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XC_RS04375 PF05598 Transposase domain (DUF772) XC_RS04390 PF00365 Phosphofructokinase XC_RS04400 PF08245 Mur ligase middle domain XC_RS04400 PF02875 Mur ligase family, glutamate ligase domain XC_RS04400 PF01225 Mur ligase family, catalytic domain XC_RS04410 PF01062 Bestrophin, RFP-TM, chloride channel XC_RS04415 PF01569 PAP2 superfamily XC_RS04435 PF00520 Ion transport protein XC_RS04435 PF00027 Cyclic nucleotide-binding domain XC_RS04440 PF00202 Aminotransferase class-III XC_RS04455 PF01593 Flavin containing amine oxidoreductase XC_RS04460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XC_RS04460 PF00034 Cytochrome c XC_RS04470 PF00155 Aminotransferase class I and II XC_RS04475 PF00127 Copper binding proteins, plastocyanin/azurin family XC_RS04480 PF17874 MalT-like TPR region XC_RS04480 PF00196 Bacterial regulatory proteins, luxR family XC_RS04485 PF00202 Aminotransferase class-III XC_RS04495 PF02581 Thiamine monophosphate synthase XC_RS04500 PF00301 Rubredoxin XC_RS04505 PF13369 Transglutaminase-like superfamily XC_RS04515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XC_RS04525 PF01812 5-formyltetrahydrofolate cyclo-ligase family XC_RS04530 PF05164 Cell division protein ZapA XC_RS04540 PF03695 Uncharacterised protein family (UPF0149) XC_RS04545 PF05195 Aminopeptidase P, N-terminal domain XC_RS04545 PF00557 Metallopeptidase family M24 XC_RS04555 PF04273 Putative phosphatase (DUF442) XC_RS04555 PF00753 Metallo-beta-lactamase superfamily XC_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS04580 PF00005 ABC transporter XC_RS04580 PF03459 TOBE domain XC_RS04600 PF03965 Penicillinase repressor XC_RS04620 PF03734 L,D-transpeptidase catalytic domain XC_RS04620 PF01476 LysM domain XC_RS04625 PF04225 Opacity-associated protein A LysM-like domain XC_RS04625 PF01551 Peptidase family M23 XC_RS04635 PF03466 LysR substrate binding domain XC_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS04645 PF01527 Transposase XC_RS04650 PF13276 HTH-like domain XC_RS04650 PF13683 Integrase core domain XC_RS04655 PF12146 Serine aminopeptidase, S33 XC_RS04660 PF00456 Transketolase, thiamine diphosphate binding domain XC_RS04660 PF02780 Transketolase, C-terminal domain XC_RS04660 PF02779 Transketolase, pyrimidine binding domain XC_RS04665 PF00375 Sodium:dicarboxylate symporter family XC_RS04675 PF00092 von Willebrand factor type A domain XC_RS04675 PF07584 Aerotolerance regulator N-terminal XC_RS04695 PF17863 AAA lid domain XC_RS04695 PF07726 ATPase family associated with various cellular activities (AAA) XC_RS04700 PF00263 Bacterial type II and III secretion system protein XC_RS04700 PF03958 Bacterial type II/III secretion system short domain XC_RS04700 PF07660 Secretin and TonB N terminus short domain XC_RS04700 PF11741 AMIN domain XC_RS04705 PF04351 Pilus assembly protein, PilP XC_RS04710 PF04350 Pilus assembly protein, PilO XC_RS04715 PF05137 Fimbrial assembly protein (PilN) XC_RS04720 PF11104 Type IV pilus assembly protein PilM; XC_RS04725 PF17092 Penicillin-binding protein OB-like domain XC_RS04725 PF00912 Transglycosylase XC_RS04725 PF00905 Penicillin binding protein transpeptidase domain XC_RS04735 PF00285 Citrate synthase, C-terminal domain XC_RS04740 PF01197 Ribosomal protein L31 XC_RS04745 PF01156 Inosine-uridine preferring nucleoside hydrolase XC_RS04750 PF17191 RecG wedge domain XC_RS04750 PF00270 DEAD/DEAH box helicase XC_RS04750 PF00271 Helicase conserved C-terminal domain XC_RS04755 PF01042 Endoribonuclease L-PSP XC_RS04760 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus XC_RS04760 PF08666 SAF domain XC_RS04765 PF03573 outer membrane porin, OprD family XC_RS04770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XC_RS04770 PF13378 Enolase C-terminal domain-like XC_RS04775 PF07690 Major Facilitator Superfamily XC_RS04780 PF00171 Aldehyde dehydrogenase family XC_RS04785 PF00701 Dihydrodipicolinate synthetase family XC_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS04790 PF03466 LysR substrate binding domain XC_RS04795 PF02824 TGS domain XC_RS04795 PF04607 Region found in RelA / SpoT proteins XC_RS04795 PF13291 ACT domain XC_RS04800 PF01192 RNA polymerase Rpb6 XC_RS04805 PF00625 Guanylate kinase XC_RS04810 PF03755 YicC-like family, N-terminal region XC_RS04810 PF08340 Domain of unknown function (DUF1732) XC_RS04815 PF01138 3' exoribonuclease family, domain 1 XC_RS04815 PF03725 3' exoribonuclease family, domain 2 XC_RS04820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XC_RS04825 PF01725 Ham1 family XC_RS04830 PF04055 Radical SAM superfamily XC_RS04830 PF06969 HemN C-terminal domain XC_RS04845 PF00557 Metallopeptidase family M24 XC_RS04855 PF03922 OmpW family XC_RS04870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XC_RS04870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XC_RS04890 PF00162 Phosphoglycerate kinase XC_RS04895 PF13419 Haloacid dehalogenase-like hydrolase XC_RS04900 PF02887 Pyruvate kinase, alpha/beta domain XC_RS04900 PF00224 Pyruvate kinase, barrel domain XC_RS04905 PF00274 Fructose-bisphosphate aldolase class-I XC_RS04910 PF01661 Macro domain XC_RS04920 PF00291 Pyridoxal-phosphate dependent enzyme XC_RS04925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XC_RS04925 PF10414 Sirohaem synthase dimerisation region XC_RS04925 PF14824 Sirohaem biosynthesis protein central XC_RS04930 PF03466 LysR substrate binding domain XC_RS04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS04940 PF00672 HAMP domain XC_RS04940 PF00072 Response regulator receiver domain XC_RS04940 PF01627 Hpt domain XC_RS04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS04940 PF00512 His Kinase A (phospho-acceptor) domain XC_RS04960 PF01507 Phosphoadenosine phosphosulfate reductase family XC_RS04965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XC_RS04965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XC_RS04970 PF00258 Flavodoxin XC_RS04970 PF00175 Oxidoreductase NAD-binding domain XC_RS04970 PF00667 FAD binding domain XC_RS04975 PF01507 Phosphoadenosine phosphosulfate reductase family XC_RS04980 PF00009 Elongation factor Tu GTP binding domain XC_RS04985 PF00529 HlyD membrane-fusion protein of T1SS XC_RS04985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS04990 PF00873 AcrB/AcrD/AcrF family XC_RS04995 PF01433 Peptidase family M1 domain XC_RS04995 PF11838 ERAP1-like C-terminal domain XC_RS05005 PF01235 Sodium:alanine symporter family XC_RS05010 PF00588 SpoU rRNA Methylase family XC_RS05010 PF08032 RNA 2'-O ribose methyltransferase substrate binding XC_RS05015 PF00135 Carboxylesterase family XC_RS05020 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XC_RS05020 PF14508 Glycosyl-hydrolase 97 N-terminal XC_RS05020 PF10566 Glycoside hydrolase 97 XC_RS05025 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XC_RS05025 PF00703 Glycosyl hydrolases family 2 XC_RS05025 PF02929 Beta galactosidase small chain XC_RS05025 PF02837 Glycosyl hydrolases family 2, sugar binding domain XC_RS05025 PF16353 Domain of unknown function(DUF4981) XC_RS05035 PF01341 Glycosyl hydrolases family 6 XC_RS05035 PF00553 Cellulose binding domain XC_RS05035 PF00041 Fibronectin type III domain XC_RS05040 PF00356 Bacterial regulatory proteins, lacI family XC_RS05055 PF01741 Large-conductance mechanosensitive channel, MscL XC_RS05060 PF01557 Fumarylacetoacetate (FAA) hydrolase family XC_RS05075 PF02080 TrkA-C domain XC_RS05075 PF03600 Citrate transporter XC_RS05080 PF02390 Putative methyltransferase XC_RS05085 PF05690 Thiazole biosynthesis protein ThiG XC_RS05095 PF03797 Autotransporter beta-domain XC_RS05095 PF00657 GDSL-like Lipase/Acylhydrolase XC_RS05105 PF14659 Phage integrase, N-terminal SAM-like domain XC_RS05105 PF00589 Phage integrase family XC_RS05105 PF13356 Arm DNA-binding domain XC_RS05125 PF01381 Helix-turn-helix XC_RS05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS05130 PF03466 LysR substrate binding domain XC_RS05140 PF13683 Integrase core domain XC_RS05140 PF13276 HTH-like domain XC_RS05145 PF13683 Integrase core domain XC_RS05145 PF13276 HTH-like domain XC_RS05150 PF01527 Transposase XC_RS05155 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XC_RS05175 PF01527 Transposase XC_RS05180 PF13683 Integrase core domain XC_RS05180 PF13276 HTH-like domain XC_RS05185 PF13683 Integrase core domain XC_RS05185 PF13276 HTH-like domain XC_RS05190 PF01527 Transposase XC_RS05195 PF13683 Integrase core domain XC_RS05195 PF13276 HTH-like domain XC_RS05205 PF08448 PAS fold XC_RS05205 PF08447 PAS fold XC_RS05205 PF00990 Diguanylate cyclase, GGDEF domain XC_RS05205 PF00563 EAL domain XC_RS05250 PF13276 HTH-like domain XC_RS05250 PF00665 Integrase core domain XC_RS05250 PF13333 Integrase core domain XC_RS05270 PF00128 Alpha amylase, catalytic domain XC_RS05270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XC_RS05275 PF18030 RimK PreATP-grasp domain XC_RS05275 PF08443 RimK-like ATP-grasp domain XC_RS05280 PF00486 Transcriptional regulatory protein, C terminal XC_RS05280 PF00072 Response regulator receiver domain XC_RS05285 PF11808 Phosphate regulon sensor protein PhoR XC_RS05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS05285 PF00989 PAS fold XC_RS05285 PF00512 His Kinase A (phospho-acceptor) domain XC_RS05305 PF05598 Transposase domain (DUF772) XC_RS05310 PF01121 Dephospho-CoA kinase XC_RS05315 PF01478 Type IV leader peptidase family XC_RS05315 PF06750 Bacterial Peptidase A24 N-terminal domain XC_RS05320 PF00482 Type II secretion system (T2SS), protein F XC_RS05325 PF07963 Prokaryotic N-terminal methylation motif XC_RS05325 PF00114 Pilin (bacterial filament) XC_RS05330 PF00114 Pilin (bacterial filament) XC_RS05330 PF07963 Prokaryotic N-terminal methylation motif XC_RS05335 PF00437 Type II/IV secretion system protein XC_RS05335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XC_RS05340 PF00158 Sigma-54 interaction domain XC_RS05340 PF00072 Response regulator receiver domain XC_RS05340 PF02954 Bacterial regulatory protein, Fis family XC_RS05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS05345 PF00512 His Kinase A (phospho-acceptor) domain XC_RS05350 PF00549 CoA-ligase XC_RS05350 PF08442 ATP-grasp domain XC_RS05355 PF00549 CoA-ligase XC_RS05355 PF02629 CoA binding domain XC_RS05370 PF02540 NAD synthase XC_RS05370 PF00795 Carbon-nitrogen hydrolase XC_RS05380 PF13525 Outer membrane lipoprotein XC_RS05385 PF00849 RNA pseudouridylate synthase XC_RS05390 PF02578 Multi-copper polyphenol oxidoreductase laccase XC_RS05405 PF00672 HAMP domain XC_RS05405 PF02203 Tar ligand binding domain homologue XC_RS05405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS05410 PF01011 PQQ enzyme repeat XC_RS05415 PF00982 Glycosyltransferase family 20 XC_RS05420 PF00723 Glycosyl hydrolases family 15 XC_RS05425 PF02358 Trehalose-phosphatase XC_RS05430 PF00593 TonB dependent receptor XC_RS05430 PF07715 TonB-dependent Receptor Plug Domain XC_RS05465 PF01541 GIY-YIG catalytic domain XC_RS05470 PF00005 ABC transporter XC_RS05475 PF02861 Clp amino terminal domain, pathogenicity island component XC_RS05475 PF17871 AAA lid domain XC_RS05475 PF00004 ATPase family associated with various cellular activities (AAA) XC_RS05475 PF10431 C-terminal, D2-small domain, of ClpB protein XC_RS05475 PF07724 AAA domain (Cdc48 subfamily) XC_RS05485 PF01053 Cys/Met metabolism PLP-dependent enzyme XC_RS05490 PF07715 TonB-dependent Receptor Plug Domain XC_RS05490 PF00593 TonB dependent receptor XC_RS05505 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XC_RS05505 PF12557 Cob(I)alamin adenosyltransferase N terminal XC_RS05510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XC_RS05510 PF07685 CobB/CobQ-like glutamine amidotransferase domain XC_RS05515 PF17113 Regulatory signalling modulator protein AmpE XC_RS05515 PF03186 CobD/Cbib protein XC_RS05520 PF07685 CobB/CobQ-like glutamine amidotransferase domain XC_RS05520 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XC_RS05525 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XC_RS05530 PF02277 Phosphoribosyltransferase XC_RS05540 PF02654 Cobalamin-5-phosphate synthase XC_RS05550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XC_RS05550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XC_RS05555 PF04183 IucA / IucC family XC_RS05555 PF06276 Ferric iron reductase FhuF-like transporter XC_RS05560 PF07690 Major Facilitator Superfamily XC_RS05565 PF06276 Ferric iron reductase FhuF-like transporter XC_RS05565 PF04183 IucA / IucC family XC_RS05575 PF07660 Secretin and TonB N terminus short domain XC_RS05575 PF00593 TonB dependent receptor XC_RS05575 PF07715 TonB-dependent Receptor Plug Domain XC_RS05585 PF02254 TrkA-N domain XC_RS05585 PF00999 Sodium/hydrogen exchanger family XC_RS05590 PF00067 Cytochrome P450 XC_RS05595 PF07715 TonB-dependent Receptor Plug Domain XC_RS05595 PF00593 TonB dependent receptor XC_RS05600 PF07715 TonB-dependent Receptor Plug Domain XC_RS05600 PF00593 TonB dependent receptor XC_RS05610 PF07715 TonB-dependent Receptor Plug Domain XC_RS05610 PF00593 TonB dependent receptor XC_RS05615 PF12848 ABC transporter XC_RS05615 PF00005 ABC transporter XC_RS05625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS05625 PF03466 LysR substrate binding domain XC_RS05635 PF07859 alpha/beta hydrolase fold XC_RS05635 PF13472 GDSL-like Lipase/Acylhydrolase family XC_RS05640 PF04185 Phosphoesterase family XC_RS05640 PF05506 Domain of unknown function (DUF756) XC_RS05650 PF05116 Sucrose-6F-phosphate phosphohydrolase XC_RS05650 PF00982 Glycosyltransferase family 20 XC_RS05655 PF07690 Major Facilitator Superfamily XC_RS05675 PF00152 tRNA synthetases class II (D, K and N) XC_RS05675 PF02938 GAD domain XC_RS05675 PF01336 OB-fold nucleic acid binding domain XC_RS05690 PF01709 Transcriptional regulator XC_RS05695 PF02075 Crossover junction endodeoxyribonuclease RuvC XC_RS05700 PF07499 RuvA, C-terminal domain XC_RS05700 PF01330 RuvA N terminal domain XC_RS05705 PF02705 K+ potassium transporter XC_RS05715 PF05491 RuvB C-terminal winged helix domain XC_RS05715 PF17864 RuvB AAA lid domain XC_RS05715 PF05496 Holliday junction DNA helicase RuvB P-loop domain XC_RS05720 PF03061 Thioesterase superfamily XC_RS05725 PF01618 MotA/TolQ/ExbB proton channel family XC_RS05730 PF02472 Biopolymer transport protein ExbD/TolR XC_RS05740 PF04052 TolB amino-terminal domain XC_RS05740 PF07676 WD40-like Beta Propeller Repeat XC_RS05745 PF00691 OmpA family XC_RS05755 PF04055 Radical SAM superfamily XC_RS05760 PF06508 Queuosine biosynthesis protein QueC XC_RS05795 PF00654 Voltage gated chloride channel XC_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS05800 PF03466 LysR substrate binding domain XC_RS05805 PF01810 LysE type translocator XC_RS05825 PF01479 S4 domain XC_RS05825 PF00849 RNA pseudouridylate synthase XC_RS05845 PF00570 HRDC domain XC_RS05845 PF00271 Helicase conserved C-terminal domain XC_RS05845 PF00270 DEAD/DEAH box helicase XC_RS05845 PF09382 RQC domain XC_RS05845 PF16124 RecQ zinc-binding XC_RS05850 PF00210 Ferritin-like domain XC_RS05855 PF00271 Helicase conserved C-terminal domain XC_RS05855 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XC_RS05855 PF11898 Domain of unknown function (DUF3418) XC_RS05855 PF04408 Helicase associated domain (HA2) XC_RS05855 PF00270 DEAD/DEAH box helicase XC_RS05865 PF02685 Glucokinase XC_RS05880 PF13186 Iron-sulfur cluster-binding domain XC_RS05880 PF04055 Radical SAM superfamily XC_RS05885 PF05402 Coenzyme PQQ synthesis protein D (PqqD) XC_RS05890 PF03070 TENA/THI-4/PQQC family XC_RS05895 PF12706 Beta-lactamase superfamily domain XC_RS05900 PF02824 TGS domain XC_RS05900 PF04607 Region found in RelA / SpoT proteins XC_RS05900 PF13291 ACT domain XC_RS05910 PF00535 Glycosyl transferase family 2 XC_RS05915 PF00905 Penicillin binding protein transpeptidase domain XC_RS05915 PF00912 Transglycosylase XC_RS05915 PF14814 Bifunctional transglycosylase second domain XC_RS05925 PF04851 Type III restriction enzyme, res subunit XC_RS05925 PF13307 Helicase C-terminal domain XC_RS05930 PF00814 Glycoprotease family XC_RS05935 PF03747 ADP-ribosylglycohydrolase XC_RS05945 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XC_RS05945 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XC_RS05950 PF00072 Response regulator receiver domain XC_RS05955 PF00072 Response regulator receiver domain XC_RS05960 PF01584 CheW-like domain XC_RS05965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS05965 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XC_RS05970 PF00072 Response regulator receiver domain XC_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS05970 PF01627 Hpt domain XC_RS05970 PF01584 CheW-like domain XC_RS05970 PF02895 Signal transducing histidine kinase, homodimeric domain XC_RS05985 PF13302 Acetyltransferase (GNAT) domain XC_RS05995 PF04542 Sigma-70 region 2 XC_RS05995 PF08281 Sigma-70, region 4 XC_RS06000 PF12450 von Willebrand factor XC_RS06000 PF00092 von Willebrand factor type A domain XC_RS06000 PF12034 Domain of unknown function (DUF3520) XC_RS06005 PF01112 Asparaginase XC_RS06010 PF03932 CutC family XC_RS06015 PF00067 Cytochrome P450 XC_RS06050 PF11867 Domain of unknown function (DUF3387) XC_RS06050 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XC_RS06050 PF18766 SWI2/SNF2 ATPase XC_RS06065 PF12161 HsdM N-terminal domain XC_RS06065 PF02384 N-6 DNA Methylase XC_RS06085 PF01527 Transposase XC_RS06090 PF13333 Integrase core domain XC_RS06090 PF00665 Integrase core domain XC_RS06090 PF13276 HTH-like domain XC_RS06100 PF01301 Glycosyl hydrolases family 35 XC_RS06105 PF07971 Glycosyl hydrolase family 92 XC_RS06105 PF17678 Glycosyl hydrolase family 92 N-terminal domain XC_RS06115 PF14310 Fibronectin type III-like domain XC_RS06115 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS06115 PF07691 PA14 domain XC_RS06115 PF01915 Glycosyl hydrolase family 3 C-terminal domain XC_RS06125 PF02838 Glycosyl hydrolase family 20, domain 2 XC_RS06125 PF07691 PA14 domain XC_RS06125 PF00728 Glycosyl hydrolase family 20, catalytic domain XC_RS06130 PF00704 Glycosyl hydrolases family 18 XC_RS06130 PF01476 LysM domain XC_RS06145 PF02685 Glucokinase XC_RS06150 PF04452 RNA methyltransferase XC_RS06155 PF00202 Aminotransferase class-III XC_RS06160 PF00293 NUDIX domain XC_RS06165 PF00459 Inositol monophosphatase family XC_RS06170 PF03819 MazG nucleotide pyrophosphohydrolase domain XC_RS06175 PF02694 Uncharacterised BCR, YnfA/UPF0060 family XC_RS06180 PF16200 C-terminal region of band_7 XC_RS06180 PF01145 SPFH domain / Band 7 family XC_RS06190 PF01571 Aminomethyltransferase folate-binding domain XC_RS06190 PF08669 Glycine cleavage T-protein C-terminal barrel domain XC_RS06195 PF01597 Glycine cleavage H-protein XC_RS06220 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS06220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS06220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS06220 PF09317 Domain of unknown function (DUF1974) XC_RS06230 PF00440 Bacterial regulatory proteins, tetR family XC_RS06235 PF00593 TonB dependent receptor XC_RS06235 PF07715 TonB-dependent Receptor Plug Domain XC_RS06245 PF01430 Hsp33 protein XC_RS06250 PF00912 Transglycosylase XC_RS06255 PF00535 Glycosyl transferase family 2 XC_RS06260 PF00478 IMP dehydrogenase / GMP reductase domain XC_RS06260 PF00571 CBS domain XC_RS06265 PF05170 AsmA family XC_RS06270 PF03006 Haemolysin-III related XC_RS06275 PF16658 Class II release factor RF3, C-terminal domain XC_RS06275 PF00009 Elongation factor Tu GTP binding domain XC_RS06280 PF08460 Bacterial SH3 domain XC_RS06280 PF01551 Peptidase family M23 XC_RS06285 PF00561 alpha/beta hydrolase fold XC_RS06290 PF01053 Cys/Met metabolism PLP-dependent enzyme XC_RS06295 PF03447 Homoserine dehydrogenase, NAD binding domain XC_RS06295 PF00742 Homoserine dehydrogenase XC_RS06295 PF00696 Amino acid kinase family XC_RS06300 PF12697 Alpha/beta hydrolase family XC_RS06305 PF03313 Serine dehydratase alpha chain XC_RS06305 PF03315 Serine dehydratase beta chain XC_RS06325 PF04264 YceI-like domain XC_RS06330 PF17149 Periplasmic sensor domain found in signal transduction proteins XC_RS06330 PF00672 HAMP domain XC_RS06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS06330 PF01627 Hpt domain XC_RS06330 PF00512 His Kinase A (phospho-acceptor) domain XC_RS06330 PF00072 Response regulator receiver domain XC_RS06335 PF00072 Response regulator receiver domain XC_RS06335 PF17149 Periplasmic sensor domain found in signal transduction proteins XC_RS06335 PF00672 HAMP domain XC_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS06335 PF00512 His Kinase A (phospho-acceptor) domain XC_RS06335 PF01627 Hpt domain XC_RS06340 PF17149 Periplasmic sensor domain found in signal transduction proteins XC_RS06340 PF00672 HAMP domain XC_RS06340 PF00072 Response regulator receiver domain XC_RS06340 PF01627 Hpt domain XC_RS06340 PF00512 His Kinase A (phospho-acceptor) domain XC_RS06340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS06345 PF07690 Major Facilitator Superfamily XC_RS06350 PF01208 Uroporphyrinogen decarboxylase (URO-D) XC_RS06360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XC_RS06360 PF01243 Pyridoxamine 5'-phosphate oxidase XC_RS06365 PF01761 3-dehydroquinate synthase XC_RS06370 PF01202 Shikimate kinase XC_RS06375 PF01243 Pyridoxamine 5'-phosphate oxidase XC_RS06375 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XC_RS06385 PF04012 PspA/IM30 family XC_RS06410 PF03738 Glutathionylspermidine synthase preATP-grasp XC_RS06415 PF07690 Major Facilitator Superfamily XC_RS06420 PF00376 MerR family regulatory protein XC_RS06420 PF09278 MerR, DNA binding XC_RS06455 PF04820 Tryptophan halogenase XC_RS06480 PF01339 CheB methylesterase XC_RS06480 PF00072 Response regulator receiver domain XC_RS06490 PF00324 Amino acid permease XC_RS06495 PF00196 Bacterial regulatory proteins, luxR family XC_RS06500 PF00561 alpha/beta hydrolase fold XC_RS06505 PF00544 Pectate lyase XC_RS06510 PF00324 Amino acid permease XC_RS06515 PF01654 Cytochrome bd terminal oxidase subunit I XC_RS06520 PF02322 Cytochrome bd terminal oxidase subunit II XC_RS06530 PF00571 CBS domain XC_RS06530 PF01769 Divalent cation transporter XC_RS06530 PF03448 MgtE intracellular N domain XC_RS06535 PF05524 PEP-utilising enzyme, N-terminal XC_RS06535 PF00391 PEP-utilising enzyme, mobile domain XC_RS06535 PF02896 PEP-utilising enzyme, TIM barrel domain XC_RS06540 PF00381 PTS HPr component phosphorylation site XC_RS06550 PF03668 P-loop ATPase protein family XC_RS06555 PF02603 HPr Serine kinase N terminus XC_RS06555 PF07475 HPr Serine kinase C-terminal domain XC_RS06560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XC_RS06565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XC_RS06570 PF04552 Sigma-54, DNA binding domain XC_RS06570 PF04963 Sigma-54 factor, core binding domain XC_RS06570 PF00309 Sigma-54 factor, Activator interacting domain (AID) XC_RS06575 PF00005 ABC transporter XC_RS06595 PF00571 CBS domain XC_RS06595 PF01380 SIS domain XC_RS06600 PF01722 BolA-like protein XC_RS06605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XC_RS06625 PF00551 Formyl transferase XC_RS06635 PF02769 AIR synthase related protein, C-terminal domain XC_RS06635 PF00586 AIR synthase related protein, N-terminal domain XC_RS06645 PF01594 AI-2E family transporter XC_RS06650 PF00308 Bacterial dnaA protein XC_RS06655 PF00483 Nucleotidyl transferase XC_RS06660 PF01636 Phosphotransferase enzyme family XC_RS06670 PF07687 Peptidase dimerisation domain XC_RS06670 PF01546 Peptidase family M20/M25/M40 XC_RS06685 PF00258 Flavodoxin XC_RS06685 PF00667 FAD binding domain XC_RS06685 PF00175 Oxidoreductase NAD-binding domain XC_RS06690 PF02424 ApbE family XC_RS06715 PF18331 PKHD-type hydroxylase C-terminal domain XC_RS06715 PF13640 2OG-Fe(II) oxygenase superfamily XC_RS06720 PF00593 TonB dependent receptor XC_RS06720 PF07715 TonB-dependent Receptor Plug Domain XC_RS06725 PF00355 Rieske [2Fe-2S] domain XC_RS06735 PF00266 Aminotransferase class-V XC_RS06740 PF01458 Uncharacterized protein family (UPF0051) XC_RS06745 PF00005 ABC transporter XC_RS06750 PF01458 Uncharacterized protein family (UPF0051) XC_RS06765 PF01965 DJ-1/PfpI family XC_RS06795 PF14748 Pyrroline-5-carboxylate reductase dimerisation XC_RS06795 PF03807 NADP oxidoreductase coenzyme F420-dependent XC_RS06800 PF01168 Alanine racemase, N-terminal domain XC_RS06805 PF00437 Type II/IV secretion system protein XC_RS06810 PF00437 Type II/IV secretion system protein XC_RS06830 PF00958 GMP synthase C terminal domain XC_RS06830 PF00117 Glutamine amidotransferase class-I XC_RS06830 PF13673 Acetyltransferase (GNAT) domain XC_RS06830 PF13302 Acetyltransferase (GNAT) domain XC_RS06830 PF03352 Methyladenine glycosylase XC_RS06835 PF13687 Domain of unknown function (DUF4153) XC_RS06840 PF02622 Uncharacterized ACR, COG1678 XC_RS06845 PF03652 Holliday junction resolvase XC_RS06850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XC_RS06850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XC_RS06855 PF02566 OsmC-like protein XC_RS06865 PF02567 Phenazine biosynthesis-like protein XC_RS06870 PF02567 Phenazine biosynthesis-like protein XC_RS06875 PF01842 ACT domain XC_RS06875 PF00696 Amino acid kinase family XC_RS06890 PF08245 Mur ligase middle domain XC_RS06900 PF00348 Polyprenyl synthetase XC_RS06905 PF00436 Single-strand binding protein family XC_RS06915 PF12102 Domain of unknown function (DUF3578) XC_RS06915 PF07728 AAA domain (dynein-related subfamily) XC_RS06925 PF00990 Diguanylate cyclase, GGDEF domain XC_RS06925 PF00360 Phytochrome region XC_RS06925 PF00563 EAL domain XC_RS06925 PF01590 GAF domain XC_RS06930 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS06930 PF00107 Zinc-binding dehydrogenase XC_RS06935 PF10518 TAT (twin-arginine translocation) pathway signal sequence XC_RS06935 PF01799 [2Fe-2S] binding domain XC_RS06935 PF00111 2Fe-2S iron-sulfur cluster binding domain XC_RS06940 PF00941 FAD binding domain in molybdopterin dehydrogenase XC_RS06940 PF03450 CO dehydrogenase flavoprotein C-terminal domain XC_RS06945 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XC_RS06945 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_RS06950 PF02625 XdhC and CoxI family XC_RS06950 PF13478 XdhC Rossmann domain XC_RS06955 PF12804 MobA-like NTP transferase domain XC_RS06985 PF04328 Selenoprotein, putative XC_RS06990 PF13722 5TM C-terminal transporter carbon starvation CstA XC_RS06990 PF02554 Carbon starvation protein CstA XC_RS06995 PF05726 Pirin C-terminal cupin domain XC_RS06995 PF02678 Pirin XC_RS07010 PF05726 Pirin C-terminal cupin domain XC_RS07010 PF02678 Pirin XC_RS07015 PF04493 Endonuclease V XC_RS07020 PF00300 Histidine phosphatase superfamily (branch 1) XC_RS07030 PF05649 Peptidase family M13 XC_RS07030 PF01431 Peptidase family M13 XC_RS07035 PF05598 Transposase domain (DUF772) XC_RS07035 PF01609 Transposase DDE domain XC_RS07040 PF13091 PLD-like domain XC_RS07045 PF00072 Response regulator receiver domain XC_RS07045 PF01339 CheB methylesterase XC_RS07050 PF01739 CheR methyltransferase, SAM binding domain XC_RS07050 PF03705 CheR methyltransferase, all-alpha domain XC_RS07055 PF13426 PAS domain XC_RS07055 PF00990 Diguanylate cyclase, GGDEF domain XC_RS07055 PF00563 EAL domain XC_RS07060 PF01584 CheW-like domain XC_RS07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS07065 PF02203 Tar ligand binding domain homologue XC_RS07065 PF00672 HAMP domain XC_RS07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS07070 PF01584 CheW-like domain XC_RS07070 PF01627 Hpt domain XC_RS07070 PF02895 Signal transducing histidine kinase, homodimeric domain XC_RS07070 PF09078 CheY binding XC_RS07080 PF00270 DEAD/DEAH box helicase XC_RS07080 PF00271 Helicase conserved C-terminal domain XC_RS07080 PF17757 UvrB interaction domain XC_RS07080 PF03461 TRCF domain XC_RS07080 PF02559 CarD-like/TRCF domain XC_RS07090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XC_RS07095 PF00072 Response regulator receiver domain XC_RS07095 PF00486 Transcriptional regulatory protein, C terminal XC_RS07105 PF00672 HAMP domain XC_RS07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS07105 PF00512 His Kinase A (phospho-acceptor) domain XC_RS07115 PF06123 Inner membrane protein CreD XC_RS07145 PF00749 tRNA synthetases class I (E and Q), catalytic domain XC_RS07150 PF01475 Ferric uptake regulator family XC_RS07160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS07160 PF00529 HlyD membrane-fusion protein of T1SS XC_RS07165 PF00873 AcrB/AcrD/AcrF family XC_RS07170 PF02321 Outer membrane efflux protein XC_RS07175 PF00440 Bacterial regulatory proteins, tetR family XC_RS07175 PF16859 Tetracyclin repressor-like, C-terminal domain XC_RS07180 PF00248 Aldo/keto reductase family XC_RS07185 PF03466 LysR substrate binding domain XC_RS07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS07195 PF12833 Helix-turn-helix domain XC_RS07195 PF06719 AraC-type transcriptional regulator N-terminus XC_RS07210 PF01483 Proprotein convertase P-domain XC_RS07210 PF00082 Subtilase family XC_RS07215 PF03466 LysR substrate binding domain XC_RS07215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS07220 PF07690 Major Facilitator Superfamily XC_RS07250 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XC_RS07250 PF01568 Molydopterin dinucleotide binding domain XC_RS07250 PF00384 Molybdopterin oxidoreductase XC_RS07250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XC_RS07250 PF12838 4Fe-4S dicluster domain XC_RS07260 PF01654 Cytochrome bd terminal oxidase subunit I XC_RS07265 PF02322 Cytochrome bd terminal oxidase subunit II XC_RS07280 PF07715 TonB-dependent Receptor Plug Domain XC_RS07280 PF00593 TonB dependent receptor XC_RS07295 PF00654 Voltage gated chloride channel XC_RS07310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XC_RS07310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XC_RS07340 PF01494 FAD binding domain XC_RS07365 PF00271 Helicase conserved C-terminal domain XC_RS07365 PF00270 DEAD/DEAH box helicase XC_RS07365 PF03880 DbpA RNA binding domain XC_RS07370 PF08448 PAS fold XC_RS07370 PF00990 Diguanylate cyclase, GGDEF domain XC_RS07370 PF00563 EAL domain XC_RS07375 PF00849 RNA pseudouridylate synthase XC_RS07375 PF01479 S4 domain XC_RS07380 PF05598 Transposase domain (DUF772) XC_RS07395 PF03737 Aldolase/RraA XC_RS07400 PF00144 Beta-lactamase XC_RS07410 PF00999 Sodium/hydrogen exchanger family XC_RS07415 PF00664 ABC transporter transmembrane region XC_RS07415 PF00005 ABC transporter XC_RS07440 PF01022 Bacterial regulatory protein, arsR family XC_RS07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS07445 PF03466 LysR substrate binding domain XC_RS07460 PF04070 Domain of unknown function (DUF378) XC_RS07470 PF00085 Thioredoxin XC_RS07480 PF13603 Leucyl-tRNA synthetase, Domain 2 XC_RS07480 PF00133 tRNA synthetases class I (I, L, M and V) XC_RS07480 PF08264 Anticodon-binding domain of tRNA XC_RS07495 PF01467 Cytidylyltransferase-like XC_RS07510 PF02590 Predicted SPOUT methyltransferase XC_RS07520 PF04402 Protein of unknown function (DUF541) XC_RS07525 PF02545 Maf-like protein XC_RS07530 PF10150 Ribonuclease E/G family XC_RS07530 PF00575 S1 RNA binding domain XC_RS07535 PF13116 Protein of unknown function XC_RS07535 PF13502 AsmA-like C-terminal region XC_RS07545 PF01523 Putative modulator of DNA gyrase XC_RS07550 PF04751 Protein of unknown function (DUF615) XC_RS07555 PF01523 Putative modulator of DNA gyrase XC_RS07570 PF00348 Polyprenyl synthetase XC_RS07575 PF02609 Exonuclease VII small subunit XC_RS07580 PF01171 PP-loop family XC_RS07580 PF09179 TilS substrate binding domain XC_RS07580 PF11734 TilS substrate C-terminal domain XC_RS07585 PF00245 Alkaline phosphatase XC_RS07590 PF00375 Sodium:dicarboxylate symporter family XC_RS07610 PF05598 Transposase domain (DUF772) XC_RS07620 PF00512 His Kinase A (phospho-acceptor) domain XC_RS07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS07625 PF02954 Bacterial regulatory protein, Fis family XC_RS07625 PF00989 PAS fold XC_RS07625 PF00158 Sigma-54 interaction domain XC_RS07630 PF00158 Sigma-54 interaction domain XC_RS07630 PF00072 Response regulator receiver domain XC_RS07630 PF02954 Bacterial regulatory protein, Fis family XC_RS07660 PF00877 NlpC/P60 family XC_RS07665 PF00877 NlpC/P60 family XC_RS07670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XC_RS07675 PF04235 Protein of unknown function (DUF418) XC_RS07680 PF01266 FAD dependent oxidoreductase XC_RS07685 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS07685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XC_RS07705 PF05649 Peptidase family M13 XC_RS07705 PF01431 Peptidase family M13 XC_RS07710 PF05649 Peptidase family M13 XC_RS07710 PF01431 Peptidase family M13 XC_RS07720 PF07715 TonB-dependent Receptor Plug Domain XC_RS07720 PF00593 TonB dependent receptor XC_RS07725 PF10609 NUBPL iron-transfer P-loop NTPase XC_RS07730 PF00692 dUTPase XC_RS07750 PF01738 Dienelactone hydrolase family XC_RS07755 PF02661 Fic/DOC family XC_RS07760 PF18693 TRAM domain XC_RS07760 PF04055 Radical SAM superfamily XC_RS07760 PF00919 Uncharacterized protein family UPF0004 XC_RS07765 PF03449 Transcription elongation factor, N-terminal XC_RS07765 PF01272 Transcription elongation factor, GreA/GreB, C-term XC_RS07780 PF00293 NUDIX domain XC_RS07790 PF05872 Bacterial protein of unknown function (DUF853) XC_RS07805 PF02666 Phosphatidylserine decarboxylase XC_RS07810 PF02630 SCO1/SenC XC_RS07815 PF05175 Methyltransferase small domain XC_RS07825 PF01264 Chorismate synthase XC_RS07830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XC_RS07830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XC_RS07835 PF02774 Semialdehyde dehydrogenase, dimerisation domain XC_RS07835 PF01118 Semialdehyde dehydrogenase, NAD binding domain XC_RS07850 PF01416 tRNA pseudouridine synthase XC_RS07855 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XC_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS07860 PF03466 LysR substrate binding domain XC_RS07865 PF00291 Pyridoxal-phosphate dependent enzyme XC_RS07875 PF00290 Tryptophan synthase alpha chain XC_RS07880 PF01039 Carboxyl transferase domain XC_RS07880 PF17848 Acetyl-coA carboxylase zinc finger domain XC_RS07885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XC_RS07885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XC_RS07885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XC_RS07885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XC_RS07900 PF03707 Bacterial signalling protein N terminal repeat XC_RS07900 PF00563 EAL domain XC_RS07900 PF00990 Diguanylate cyclase, GGDEF domain XC_RS07910 PF01152 Bacterial-like globin XC_RS07920 PF00106 short chain dehydrogenase XC_RS07925 PF00121 Triosephosphate isomerase XC_RS07940 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XC_RS07945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XC_RS07950 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XC_RS07955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XC_RS07965 PF10531 SLBB domain XC_RS07965 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XC_RS07965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XC_RS07970 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal XC_RS07970 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XC_RS07970 PF00384 Molybdopterin oxidoreductase XC_RS07975 PF00146 NADH dehydrogenase XC_RS07980 PF12838 4Fe-4S dicluster domain XC_RS07985 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XC_RS07990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XC_RS07995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XC_RS07995 PF00361 Proton-conducting membrane transporter XC_RS08000 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus XC_RS08000 PF00361 Proton-conducting membrane transporter XC_RS08005 PF00361 Proton-conducting membrane transporter XC_RS08015 PF17384 RimP C-terminal SH3 domain XC_RS08015 PF02576 RimP N-terminal domain XC_RS08020 PF00575 S1 RNA binding domain XC_RS08020 PF13184 NusA-like KH domain XC_RS08020 PF08529 NusA N-terminal domain XC_RS08025 PF08364 Bacterial translation initiation factor IF-2 associated region XC_RS08025 PF04760 Translation initiation factor IF-2, N-terminal region XC_RS08025 PF00009 Elongation factor Tu GTP binding domain XC_RS08025 PF11987 Translation-initiation factor 2 XC_RS08030 PF02033 Ribosome-binding factor A XC_RS08035 PF16198 tRNA pseudouridylate synthase B C-terminal domain XC_RS08035 PF09157 Pseudouridine synthase II TruB, C-terminal XC_RS08035 PF01509 TruB family pseudouridylate synthase (N terminal domain) XC_RS08040 PF00312 Ribosomal protein S15 XC_RS08045 PF00575 S1 RNA binding domain XC_RS08045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XC_RS08045 PF01138 3' exoribonuclease family, domain 1 XC_RS08045 PF03725 3' exoribonuclease family, domain 2 XC_RS08045 PF00013 KH domain XC_RS08055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XC_RS08055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XC_RS08065 PF00731 AIR carboxylase XC_RS08070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XC_RS08070 PF02222 ATP-grasp domain XC_RS08075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XC_RS08075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XC_RS08080 PF00462 Glutaredoxin XC_RS08090 PF01914 MarC family integral membrane protein XC_RS08095 PF00593 TonB dependent receptor XC_RS08100 PF11892 Domain of unknown function (DUF3412) XC_RS08100 PF03641 Possible lysine decarboxylase XC_RS08100 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XC_RS08105 PF07963 Prokaryotic N-terminal methylation motif XC_RS08135 PF07963 Prokaryotic N-terminal methylation motif XC_RS08135 PF00114 Pilin (bacterial filament) XC_RS08140 PF02151 UvrB/uvrC motif XC_RS08140 PF12344 Ultra-violet resistance protein B XC_RS08140 PF00271 Helicase conserved C-terminal domain XC_RS08140 PF17757 UvrB interaction domain XC_RS08140 PF04851 Type III restriction enzyme, res subunit XC_RS08155 PF02534 Type IV secretory system Conjugative DNA transfer XC_RS08175 PF03743 Bacterial conjugation TrbI-like protein XC_RS08180 PF00437 Type II/IV secretion system protein XC_RS08185 PF01464 Transglycosylase SLT domain XC_RS08195 PF05101 Type IV secretory pathway, VirB3-like protein XC_RS08200 PF03135 CagE, TrbE, VirB family, component of type IV transporter system XC_RS08210 PF05598 Transposase domain (DUF772) XC_RS08215 PF00128 Alpha amylase, catalytic domain XC_RS08220 PF05598 Transposase domain (DUF772) XC_RS08220 PF01609 Transposase DDE domain XC_RS08235 PF10566 Glycoside hydrolase 97 XC_RS08235 PF14508 Glycosyl-hydrolase 97 N-terminal XC_RS08235 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XC_RS08245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XC_RS08250 PF00128 Alpha amylase, catalytic domain XC_RS08250 PF00686 Starch binding domain XC_RS08255 PF00356 Bacterial regulatory proteins, lacI family XC_RS08260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XC_RS08260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XC_RS08260 PF02824 TGS domain XC_RS08260 PF03129 Anticodon binding domain XC_RS08265 PF00707 Translation initiation factor IF-3, C-terminal domain XC_RS08265 PF05198 Translation initiation factor IF-3, N-terminal domain XC_RS08270 PF01632 Ribosomal protein L35 XC_RS08275 PF00453 Ribosomal protein L20 XC_RS08280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XC_RS08280 PF01409 tRNA synthetases class II core domain (F) XC_RS08285 PF03484 tRNA synthetase B5 domain XC_RS08285 PF03483 B3/4 domain XC_RS08285 PF03147 Ferredoxin-fold anticodon binding domain XC_RS08285 PF01588 Putative tRNA binding domain XC_RS08285 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XC_RS08290 PF00216 Bacterial DNA-binding protein XC_RS08295 PF13411 MerR HTH family regulatory protein XC_RS08315 PF02397 Bacterial sugar transferase XC_RS08335 PF00534 Glycosyl transferases group 1 XC_RS08335 PF13439 Glycosyltransferase Family 4 XC_RS08345 PF01943 Polysaccharide biosynthesis protein XC_RS08360 PF03808 Glycosyl transferase WecB/TagA/CpsF family XC_RS08375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XC_RS08375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XC_RS08385 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XC_RS08405 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XC_RS08405 PF02779 Transketolase, pyrimidine binding domain XC_RS08405 PF02780 Transketolase, C-terminal domain XC_RS08415 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS08415 PF12806 Acetyl-CoA dehydrogenase C-terminal like XC_RS08415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS08415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS08450 PF00512 His Kinase A (phospho-acceptor) domain XC_RS08450 PF00072 Response regulator receiver domain XC_RS08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS08450 PF08448 PAS fold XC_RS08450 PF13188 PAS domain XC_RS08470 PF00893 Small Multidrug Resistance protein XC_RS08475 PF00072 Response regulator receiver domain XC_RS08475 PF13426 PAS domain XC_RS08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS08485 PF04362 Bacterial Fe(2+) trafficking XC_RS08490 PF14815 NUDIX domain XC_RS08490 PF00730 HhH-GPD superfamily base excision DNA repair protein XC_RS08490 PF00633 Helix-hairpin-helix motif XC_RS08495 PF02881 SRP54-type protein, helical bundle domain XC_RS08495 PF00448 SRP54-type protein, GTPase domain XC_RS08505 PF05544 Proline racemase XC_RS08510 PF01266 FAD dependent oxidoreductase XC_RS08520 PF04324 BFD-like [2Fe-2S] binding domain XC_RS08520 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS08525 PF00701 Dihydrodipicolinate synthetase family XC_RS08530 PF00171 Aldehyde dehydrogenase family XC_RS08535 PF01321 Creatinase/Prolidase N-terminal domain XC_RS08535 PF00557 Metallopeptidase family M24 XC_RS08550 PF13520 Amino acid permease XC_RS08580 PF07715 TonB-dependent Receptor Plug Domain XC_RS08580 PF00593 TonB dependent receptor XC_RS08585 PF07532 Bacterial Ig-like domain (group 4) XC_RS08590 PF04616 Glycosyl hydrolases family 43 XC_RS08595 PF00326 Prolyl oligopeptidase family XC_RS08595 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XC_RS08605 PF07715 TonB-dependent Receptor Plug Domain XC_RS08605 PF00593 TonB dependent receptor XC_RS08620 PF00183 Hsp90 protein XC_RS08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS08630 PF01467 Cytidylyltransferase-like XC_RS08645 PF00037 4Fe-4S binding domain XC_RS08655 PF00759 Glycosyl hydrolase family 9 XC_RS08655 PF02927 Cellulase N-terminal ig-like domain XC_RS08685 PF00202 Aminotransferase class-III XC_RS08695 PF02547 Queuosine biosynthesis protein XC_RS08700 PF01702 Queuine tRNA-ribosyltransferase XC_RS08705 PF02699 Preprotein translocase subunit XC_RS08710 PF07549 SecD/SecF GG Motif XC_RS08710 PF02355 Protein export membrane protein XC_RS08710 PF13721 SecD export protein N-terminal TM region XC_RS08715 PF07549 SecD/SecF GG Motif XC_RS08715 PF02355 Protein export membrane protein XC_RS08735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XC_RS08740 PF00294 pfkB family carbohydrate kinase XC_RS08745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XC_RS08745 PF02896 PEP-utilising enzyme, TIM barrel domain XC_RS08745 PF00391 PEP-utilising enzyme, mobile domain XC_RS08745 PF00381 PTS HPr component phosphorylation site XC_RS08745 PF05524 PEP-utilising enzyme, N-terminal XC_RS08750 PF00356 Bacterial regulatory proteins, lacI family XC_RS08755 PF00873 AcrB/AcrD/AcrF family XC_RS08760 PF00529 HlyD membrane-fusion protein of T1SS XC_RS08760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS08770 PF05088 Bacterial NAD-glutamate dehydrogenase XC_RS08775 PF12833 Helix-turn-helix domain XC_RS08780 PF00857 Isochorismatase family XC_RS08785 PF07690 Major Facilitator Superfamily XC_RS08790 PF00072 Response regulator receiver domain XC_RS08795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS08795 PF00672 HAMP domain XC_RS08795 PF00512 His Kinase A (phospho-acceptor) domain XC_RS08795 PF00072 Response regulator receiver domain XC_RS08795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XC_RS08795 PF01627 Hpt domain XC_RS08800 PF04286 Protein of unknown function (DUF445) XC_RS08810 PF00202 Aminotransferase class-III XC_RS08815 PF07690 Major Facilitator Superfamily XC_RS08820 PF02634 FdhD/NarQ family XC_RS08825 PF00384 Molybdopterin oxidoreductase XC_RS08835 PF07690 Major Facilitator Superfamily XC_RS08835 PF00083 Sugar (and other) transporter XC_RS08840 PF01814 Hemerythrin HHE cation binding domain XC_RS08845 PF00072 Response regulator receiver domain XC_RS08845 PF00990 Diguanylate cyclase, GGDEF domain XC_RS08850 PF01266 FAD dependent oxidoreductase XC_RS08855 PF00120 Glutamine synthetase, catalytic domain XC_RS08860 PF07722 Peptidase C26 XC_RS08865 PF00120 Glutamine synthetase, catalytic domain XC_RS08870 PF00202 Aminotransferase class-III XC_RS08875 PF13416 Bacterial extracellular solute-binding protein XC_RS08880 PF13533 Biotin-lipoyl like XC_RS08885 PF07690 Major Facilitator Superfamily XC_RS08890 PF02321 Outer membrane efflux protein XC_RS08895 PF00005 ABC transporter XC_RS08895 PF08402 TOBE domain XC_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS08905 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS08915 PF00171 Aldehyde dehydrogenase family XC_RS08930 PF03471 Transporter associated domain XC_RS08930 PF00571 CBS domain XC_RS08940 PF02130 Uncharacterized protein family UPF0054 XC_RS08950 PF02562 PhoH-like protein XC_RS08955 PF00919 Uncharacterized protein family UPF0004 XC_RS08955 PF01938 TRAM domain XC_RS08955 PF04055 Radical SAM superfamily XC_RS08960 PF02798 Glutathione S-transferase, N-terminal domain XC_RS08960 PF14497 Glutathione S-transferase, C-terminal domain XC_RS08970 PF01464 Transglycosylase SLT domain XC_RS08975 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XC_RS08975 PF00355 Rieske [2Fe-2S] domain XC_RS08980 PF00032 Cytochrome b(C-terminal)/b6/petD XC_RS08980 PF00033 Cytochrome b/b6/petB XC_RS08985 PF02167 Cytochrome C1 family XC_RS08990 PF02798 Glutathione S-transferase, N-terminal domain XC_RS08990 PF00043 Glutathione S-transferase, C-terminal domain XC_RS08995 PF04386 Stringent starvation protein B XC_RS09010 PF00270 DEAD/DEAH box helicase XC_RS09010 PF08494 DEAD/H associated XC_RS09010 PF00271 Helicase conserved C-terminal domain XC_RS09015 PF02245 Methylpurine-DNA glycosylase (MPG) XC_RS09020 PF00672 HAMP domain XC_RS09020 PF12729 Four helix bundle sensory module for signal transduction XC_RS09020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS09025 PF01584 CheW-like domain XC_RS09065 PF13298 DNA polymerase Ligase (LigD) XC_RS09065 PF01068 ATP dependent DNA ligase domain XC_RS09065 PF04679 ATP dependent DNA ligase C terminal region XC_RS09070 PF00570 HRDC domain XC_RS09070 PF01612 3'-5' exonuclease XC_RS09075 PF03781 Sulfatase-modifying factor enzyme 1 XC_RS09085 PF13742 OB-fold nucleic acid binding domain XC_RS09085 PF02601 Exonuclease VII, large subunit XC_RS09090 PF08331 Domain of unknown function (DUF1730) XC_RS09095 PF01256 Carbohydrate kinase XC_RS09095 PF03853 YjeF-related protein N-terminus XC_RS09105 PF01520 N-acetylmuramoyl-L-alanine amidase XC_RS09105 PF11741 AMIN domain XC_RS09110 PF08676 MutL C terminal dimerisation domain XC_RS09110 PF01119 DNA mismatch repair protein, C-terminal domain XC_RS09125 PF07879 PHB/PHA accumulation regulator DNA-binding domain XC_RS09125 PF05233 PHB accumulation regulatory domain XC_RS09130 PF00106 short chain dehydrogenase XC_RS09135 PF00749 tRNA synthetases class I (E and Q), catalytic domain XC_RS09140 PF01435 Peptidase family M48 XC_RS09145 PF00563 EAL domain XC_RS09145 PF03707 Bacterial signalling protein N terminal repeat XC_RS09145 PF00990 Diguanylate cyclase, GGDEF domain XC_RS09155 PF07152 YaeQ protein XC_RS09160 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 XC_RS09165 PF00313 'Cold-shock' DNA-binding domain XC_RS09175 PF07859 alpha/beta hydrolase fold XC_RS09180 PF02696 Uncharacterized ACR, YdiU/UPF0061 family XC_RS09185 PF00156 Phosphoribosyl transferase domain XC_RS09190 PF00271 Helicase conserved C-terminal domain XC_RS09190 PF00270 DEAD/DEAH box helicase XC_RS09190 PF03880 DbpA RNA binding domain XC_RS09195 PF00005 ABC transporter XC_RS09195 PF16326 ABC transporter C-terminal domain XC_RS09195 PF12848 ABC transporter XC_RS09205 PF00545 ribonuclease XC_RS09210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XC_RS09210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XC_RS09215 PF00459 Inositol monophosphatase family XC_RS09220 PF00588 SpoU rRNA Methylase family XC_RS09230 PF03707 Bacterial signalling protein N terminal repeat XC_RS09230 PF00563 EAL domain XC_RS09230 PF13188 PAS domain XC_RS09230 PF00990 Diguanylate cyclase, GGDEF domain XC_RS09235 PF04055 Radical SAM superfamily XC_RS09240 PF01132 Elongation factor P (EF-P) OB domain XC_RS09240 PF08207 Elongation factor P (EF-P) KOW-like domain XC_RS09240 PF09285 Elongation factor P, C-terminal XC_RS09250 PF01979 Amidohydrolase family XC_RS09260 PF13419 Haloacid dehalogenase-like hydrolase XC_RS09270 PF00295 Glycosyl hydrolases family 28 XC_RS09275 PF01095 Pectinesterase XC_RS09285 PF00753 Metallo-beta-lactamase superfamily XC_RS09295 PF05985 Ethanolamine ammonia-lyase light chain (EutC) XC_RS09300 PF06751 Ethanolamine ammonia lyase large subunit (EutB) XC_RS09310 PF01551 Peptidase family M23 XC_RS09310 PF08460 Bacterial SH3 domain XC_RS09315 PF01979 Amidohydrolase family XC_RS09320 PF01809 Putative membrane protein insertion efficiency factor XC_RS09330 PF01258 Prokaryotic dksA/traR C4-type zinc finger XC_RS09345 PF07690 Major Facilitator Superfamily XC_RS09350 PF02657 Fe-S metabolism associated domain XC_RS09355 PF01406 tRNA synthetases class I (C) catalytic domain XC_RS09355 PF09190 DALR domain XC_RS09365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XC_RS09365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XC_RS09375 PF00764 Arginosuccinate synthase XC_RS09380 PF01546 Peptidase family M20/M25/M40 XC_RS09380 PF07687 Peptidase dimerisation domain XC_RS09385 PF00696 Amino acid kinase family XC_RS09385 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase XC_RS09395 PF01118 Semialdehyde dehydrogenase, NAD binding domain XC_RS09400 PF00206 Lyase XC_RS09415 PF01472 PUA domain XC_RS09415 PF00696 Amino acid kinase family XC_RS09420 PF00171 Aldehyde dehydrogenase family XC_RS09425 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XC_RS09425 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XC_RS09445 PF02322 Cytochrome bd terminal oxidase subunit II XC_RS09450 PF01654 Cytochrome bd terminal oxidase subunit I XC_RS09455 PF00005 ABC transporter XC_RS09455 PF00664 ABC transporter transmembrane region XC_RS09460 PF00664 ABC transporter transmembrane region XC_RS09460 PF00005 ABC transporter XC_RS09470 PF00561 alpha/beta hydrolase fold XC_RS09480 PF03918 Cytochrome C biogenesis protein XC_RS09485 PF08534 Redoxin XC_RS09490 PF01578 Cytochrome C assembly protein XC_RS09490 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XC_RS09495 PF03100 CcmE XC_RS09505 PF01578 Cytochrome C assembly protein XC_RS09510 PF03379 CcmB protein XC_RS09515 PF00005 ABC transporter XC_RS09520 PF00155 Aminotransferase class I and II XC_RS09525 PF00795 Carbon-nitrogen hydrolase XC_RS09540 PF00849 RNA pseudouridylate synthase XC_RS09540 PF01479 S4 domain XC_RS09545 PF04079 Segregation and condensation complex subunit ScpB XC_RS09550 PF02616 Segregation and condensation protein ScpA XC_RS09555 PF03795 YCII-related domain XC_RS09565 PF00356 Bacterial regulatory proteins, lacI family XC_RS09580 PF13416 Bacterial extracellular solute-binding protein XC_RS09585 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS09590 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS09615 PF00795 Carbon-nitrogen hydrolase XC_RS09620 PF04371 Porphyromonas-type peptidyl-arginine deiminase XC_RS09630 PF00444 Ribosomal protein L36 XC_RS09635 PF02224 Cytidylate kinase XC_RS09640 PF00575 S1 RNA binding domain XC_RS09645 PF00216 Bacterial DNA-binding protein XC_RS09655 PF18073 Rubredoxin metal binding domain XC_RS09660 PF00953 Glycosyl transferase family 4 XC_RS09665 PF02719 Polysaccharide biosynthesis protein XC_RS09670 PF00483 Nucleotidyl transferase XC_RS09675 PF02254 TrkA-N domain XC_RS09675 PF00999 Sodium/hydrogen exchanger family XC_RS09685 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XC_RS09685 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XC_RS09690 PF00571 CBS domain XC_RS09690 PF00478 IMP dehydrogenase / GMP reductase domain XC_RS09700 PF00117 Glutamine amidotransferase class-I XC_RS09700 PF00958 GMP synthase C terminal domain XC_RS09700 PF02540 NAD synthase XC_RS09715 PF00196 Bacterial regulatory proteins, luxR family XC_RS09715 PF00072 Response regulator receiver domain XC_RS09720 PF07730 Histidine kinase XC_RS09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS09720 PF13185 GAF domain XC_RS09720 PF13492 GAF domain XC_RS09730 PF00857 Isochorismatase family XC_RS09740 PF07969 Amidohydrolase family XC_RS09745 PF05977 Transmembrane secretion effector XC_RS09755 PF00561 alpha/beta hydrolase fold XC_RS09760 PF01566 Natural resistance-associated macrophage protein XC_RS09765 PF01325 Iron dependent repressor, N-terminal DNA binding domain XC_RS09765 PF02742 Iron dependent repressor, metal binding and dimerisation domain XC_RS09770 PF14437 MafB19-like deaminase XC_RS09775 PF00929 Exonuclease XC_RS09780 PF05552 Conserved TM helix XC_RS09780 PF00924 Mechanosensitive ion channel XC_RS09785 PF02896 PEP-utilising enzyme, TIM barrel domain XC_RS09785 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XC_RS09785 PF00391 PEP-utilising enzyme, mobile domain XC_RS09790 PF03618 Kinase/pyrophosphorylase XC_RS09810 PF01066 CDP-alcohol phosphatidyltransferase XC_RS09820 PF00561 alpha/beta hydrolase fold XC_RS09835 PF00355 Rieske [2Fe-2S] domain XC_RS09835 PF01266 FAD dependent oxidoreductase XC_RS09845 PF16921 Tex protein YqgF-like domain XC_RS09845 PF09371 Tex-like protein N-terminal domain XC_RS09845 PF17674 HHH domain XC_RS09845 PF00575 S1 RNA binding domain XC_RS09850 PF08447 PAS fold XC_RS09850 PF00990 Diguanylate cyclase, GGDEF domain XC_RS09850 PF08448 PAS fold XC_RS09850 PF00563 EAL domain XC_RS09890 PF00034 Cytochrome c XC_RS09900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS09905 PF00873 AcrB/AcrD/AcrF family XC_RS09910 PF00873 AcrB/AcrD/AcrF family XC_RS09915 PF01081 KDPG and KHG aldolase XC_RS09920 PF00920 Dehydratase family XC_RS09925 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XC_RS09930 PF02685 Glucokinase XC_RS09935 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XC_RS09935 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XC_RS09940 PF17912 MalK OB fold domain XC_RS09940 PF00005 ABC transporter XC_RS09945 PF01571 Aminomethyltransferase folate-binding domain XC_RS09950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XC_RS09955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XC_RS09960 PF02910 Fumarate reductase flavoprotein C-term XC_RS09960 PF00890 FAD binding domain XC_RS09970 PF13085 2Fe-2S iron-sulfur cluster binding domain XC_RS09975 PF03937 Flavinator of succinate dehydrogenase XC_RS09985 PF02687 FtsX-like permease family XC_RS09985 PF12704 MacB-like periplasmic core domain XC_RS09990 PF00005 ABC transporter XC_RS10000 PF03772 Competence protein XC_RS10000 PF00753 Metallo-beta-lactamase superfamily XC_RS10005 PF01618 MotA/TolQ/ExbB proton channel family XC_RS10015 PF00664 ABC transporter transmembrane region XC_RS10015 PF00005 ABC transporter XC_RS10020 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XC_RS10025 PF02348 Cytidylyltransferase XC_RS10030 PF01451 Low molecular weight phosphotyrosine protein phosphatase XC_RS10040 PF01541 GIY-YIG catalytic domain XC_RS10040 PF08459 UvrC Helix-hairpin-helix N-terminal XC_RS10040 PF02151 UvrB/uvrC motif XC_RS10045 PF01066 CDP-alcohol phosphatidyltransferase XC_RS10065 PF00589 Phage integrase family XC_RS10065 PF13356 Arm DNA-binding domain XC_RS10080 PF05394 Avirulence protein XC_RS10095 PF05598 Transposase domain (DUF772) XC_RS10110 PF01527 Transposase XC_RS10115 PF13683 Integrase core domain XC_RS10115 PF13276 HTH-like domain XC_RS10120 PF01609 Transposase DDE domain XC_RS10120 PF05598 Transposase domain (DUF772) XC_RS10140 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XC_RS10210 PF04002 RadC-like JAB domain XC_RS10335 PF13936 Helix-turn-helix domain XC_RS10335 PF00665 Integrase core domain XC_RS10365 PF02021 Uncharacterised protein family UPF0102 XC_RS10380 PF00145 C-5 cytosine-specific DNA methylase XC_RS10385 PF01751 Toprim domain XC_RS10385 PF01131 DNA topoisomerase XC_RS10390 PF00436 Single-strand binding protein family XC_RS10425 PF13614 AAA domain XC_RS10460 PF10544 T5orf172 domain XC_RS10475 PF01526 Tn3 transposase DDE domain XC_RS10475 PF13700 Domain of unknown function (DUF4158) XC_RS10480 PF13276 HTH-like domain XC_RS10480 PF13683 Integrase core domain XC_RS10490 PF13086 AAA domain XC_RS10490 PF13195 Protein of unknown function (DUF4011) XC_RS10490 PF13087 AAA domain XC_RS10490 PF13087 AAA domain XC_RS10490 PF13086 AAA domain XC_RS10490 PF13195 Protein of unknown function (DUF4011) XC_RS10500 PF07519 Tannase and feruloyl esterase XC_RS10515 PF04055 Radical SAM superfamily XC_RS10515 PF06969 HemN C-terminal domain XC_RS10525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XC_RS10525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XC_RS10525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XC_RS10530 PF01593 Flavin containing amine oxidoreductase XC_RS10535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XC_RS10545 PF00581 Rhodanese-like domain XC_RS10545 PF17773 UPF0176 acylphosphatase like domain XC_RS10550 PF00072 Response regulator receiver domain XC_RS10550 PF00196 Bacterial regulatory proteins, luxR family XC_RS10560 PF10150 Ribonuclease E/G family XC_RS10560 PF12111 Polyribonucleotide phosphorylase C terminal XC_RS10560 PF00575 S1 RNA binding domain XC_RS10565 PF00849 RNA pseudouridylate synthase XC_RS10565 PF01479 S4 domain XC_RS10570 PF02535 ZIP Zinc transporter XC_RS10580 PF01329 Pterin 4 alpha carbinolamine dehydratase XC_RS10585 PF01106 NifU-like domain XC_RS10610 PF02303 Helix-destabilising protein XC_RS10615 PF17091 Inovirus G7P protein XC_RS10680 PF17091 Inovirus G7P protein XC_RS10715 PF06165 Glycosyltransferase family 36 XC_RS10715 PF10091 Putative glucoamylase XC_RS10715 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XC_RS10720 PF13188 PAS domain XC_RS10720 PF08448 PAS fold XC_RS10720 PF00512 His Kinase A (phospho-acceptor) domain XC_RS10720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS10720 PF00072 Response regulator receiver domain XC_RS10725 PF13426 PAS domain XC_RS10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS10725 PF00072 Response regulator receiver domain XC_RS10755 PF02203 Tar ligand binding domain homologue XC_RS10755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS10755 PF00672 HAMP domain XC_RS10760 PF07715 TonB-dependent Receptor Plug Domain XC_RS10760 PF00593 TonB dependent receptor XC_RS10760 PF07660 Secretin and TonB N terminus short domain XC_RS10765 PF09335 SNARE associated Golgi protein XC_RS10790 PF01638 HxlR-like helix-turn-helix XC_RS10805 PF02630 SCO1/SenC XC_RS10820 PF05649 Peptidase family M13 XC_RS10820 PF01431 Peptidase family M13 XC_RS10830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XC_RS10835 PF07995 Glucose / Sorbosone dehydrogenase XC_RS10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS10845 PF00360 Phytochrome region XC_RS10845 PF08446 PAS fold XC_RS10845 PF01590 GAF domain XC_RS10845 PF00512 His Kinase A (phospho-acceptor) domain XC_RS10865 PF00561 alpha/beta hydrolase fold XC_RS10875 PF00082 Subtilase family XC_RS10875 PF03797 Autotransporter beta-domain XC_RS10880 PF12951 Passenger-associated-transport-repeat XC_RS10880 PF12951 Passenger-associated-transport-repeat XC_RS10885 PF00563 EAL domain XC_RS10885 PF00990 Diguanylate cyclase, GGDEF domain XC_RS10885 PF08447 PAS fold XC_RS10885 PF08448 PAS fold XC_RS10895 PF01339 CheB methylesterase XC_RS10895 PF00072 Response regulator receiver domain XC_RS10900 PF05974 Domain of unknown function (DUF892) XC_RS10915 PF01266 FAD dependent oxidoreductase XC_RS10925 PF00483 Nucleotidyl transferase XC_RS10935 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XC_RS10950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XC_RS10955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XC_RS10955 PF04324 BFD-like [2Fe-2S] binding domain XC_RS10955 PF00384 Molybdopterin oxidoreductase XC_RS10955 PF01568 Molydopterin dinucleotide binding domain XC_RS10960 PF00355 Rieske [2Fe-2S] domain XC_RS10960 PF11723 Homotrimeric ring hydroxylase XC_RS10965 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS10965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XC_RS10965 PF18267 Rubredoxin NAD+ reductase C-terminal domain XC_RS10965 PF04324 BFD-like [2Fe-2S] binding domain XC_RS10965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XC_RS10970 PF07690 Major Facilitator Superfamily XC_RS10980 PF00072 Response regulator receiver domain XC_RS10980 PF03861 ANTAR domain XC_RS10985 PF14824 Sirohaem biosynthesis protein central XC_RS10985 PF10414 Sirohaem synthase dimerisation region XC_RS10985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XC_RS10995 PF12804 MobA-like NTP transferase domain XC_RS11000 PF00994 Probable molybdopterin binding domain XC_RS11000 PF03454 MoeA C-terminal region (domain IV) XC_RS11000 PF03453 MoeA N-terminal region (domain I and II) XC_RS11010 PF03372 Endonuclease/Exonuclease/phosphatase family XC_RS11020 PF00107 Zinc-binding dehydrogenase XC_RS11020 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS11020 PF13823 Alcohol dehydrogenase GroES-associated XC_RS11035 PF00067 Cytochrome P450 XC_RS11040 PF00106 short chain dehydrogenase XC_RS11055 PF00899 ThiF family XC_RS11060 PF00994 Probable molybdopterin binding domain XC_RS11060 PF03454 MoeA C-terminal region (domain IV) XC_RS11060 PF03453 MoeA N-terminal region (domain I and II) XC_RS11065 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XC_RS11065 PF01926 50S ribosome-binding GTPase XC_RS11070 PF13360 PQQ-like domain XC_RS11070 PF01011 PQQ enzyme repeat XC_RS11080 PF13464 Domain of unknown function (DUF4115) XC_RS11090 PF04055 Radical SAM superfamily XC_RS11095 PF00334 Nucleoside diphosphate kinase XC_RS11105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XC_RS11105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XC_RS11105 PF00378 Enoyl-CoA hydratase/isomerase XC_RS11110 PF02803 Thiolase, C-terminal domain XC_RS11110 PF00108 Thiolase, N-terminal domain XC_RS11115 PF00654 Voltage gated chloride channel XC_RS11120 PF00004 ATPase family associated with various cellular activities (AAA) XC_RS11120 PF12002 MgsA AAA+ ATPase C terminal XC_RS11120 PF16193 AAA C-terminal domain XC_RS11130 PF03548 Outer membrane lipoprotein carrier protein LolA XC_RS11140 PF01580 FtsK/SpoIIIE family XC_RS11140 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XC_RS11140 PF17854 FtsK alpha domain XC_RS11140 PF09397 Ftsk gamma domain XC_RS11145 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS11155 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XC_RS11160 PF01176 Translation initiation factor 1A / IF-1 XC_RS11165 PF07724 AAA domain (Cdc48 subfamily) XC_RS11165 PF10431 C-terminal, D2-small domain, of ClpB protein XC_RS11165 PF00004 ATPase family associated with various cellular activities (AAA) XC_RS11165 PF17871 AAA lid domain XC_RS11165 PF02861 Clp amino terminal domain, pathogenicity island component XC_RS11170 PF02617 ATP-dependent Clp protease adaptor protein ClpS XC_RS11175 PF00293 NUDIX domain XC_RS11185 PF04356 Protein of unknown function (DUF489) XC_RS11190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS11190 PF00672 HAMP domain XC_RS11190 PF12729 Four helix bundle sensory module for signal transduction XC_RS11205 PF00563 EAL domain XC_RS11205 PF00990 Diguanylate cyclase, GGDEF domain XC_RS11205 PF03707 Bacterial signalling protein N terminal repeat XC_RS11210 PF07730 Histidine kinase XC_RS11210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS11215 PF00990 Diguanylate cyclase, GGDEF domain XC_RS11215 PF03707 Bacterial signalling protein N terminal repeat XC_RS11215 PF00563 EAL domain XC_RS11220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS11220 PF00512 His Kinase A (phospho-acceptor) domain XC_RS11240 PF00072 Response regulator receiver domain XC_RS11240 PF01584 CheW-like domain XC_RS11250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XC_RS11250 PF00460 Flagella basal body rod protein XC_RS11255 PF03963 Flagellar hook capping protein - N-terminal region XC_RS11260 PF07559 Flagellar basal body protein FlaE XC_RS11260 PF00460 Flagella basal body rod protein XC_RS11260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XC_RS11265 PF00460 Flagella basal body rod protein XC_RS11265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XC_RS11270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XC_RS11270 PF00460 Flagella basal body rod protein XC_RS11275 PF02107 Flagellar L-ring protein XC_RS11280 PF02119 Flagellar P-ring protein XC_RS11285 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XC_RS11285 PF10135 Rod binding protein XC_RS11290 PF07196 Flagellin hook IN motif XC_RS11290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XC_RS11295 PF00669 Bacterial flagellin N-terminal helical region XC_RS11300 PF00669 Bacterial flagellin N-terminal helical region XC_RS11300 PF00700 Bacterial flagellin C-terminal helical region XC_RS11305 PF07196 Flagellin hook IN motif XC_RS11305 PF07195 Flagellar hook-associated protein 2 C-terminus XC_RS11305 PF02465 Flagellar hook-associated protein 2 N-terminus XC_RS11310 PF02561 Flagellar protein FliS XC_RS11325 PF00196 Bacterial regulatory proteins, luxR family XC_RS11325 PF00072 Response regulator receiver domain XC_RS11330 PF04552 Sigma-54, DNA binding domain XC_RS11330 PF04963 Sigma-54 factor, core binding domain XC_RS11330 PF00309 Sigma-54 factor, Activator interacting domain (AID) XC_RS11335 PF01339 CheB methylesterase XC_RS11335 PF00072 Response regulator receiver domain XC_RS11340 PF00158 Sigma-54 interaction domain XC_RS11340 PF02954 Bacterial regulatory protein, Fis family XC_RS11340 PF06490 Flagellar regulatory protein FleQ XC_RS11345 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XC_RS11365 PF00535 Glycosyl transferase family 2 XC_RS11370 PF02049 Flagellar hook-basal body complex protein FliE XC_RS11375 PF08345 Flagellar M-ring protein C-terminal XC_RS11375 PF01514 Secretory protein of YscJ/FliF family XC_RS11380 PF14841 FliG middle domain XC_RS11380 PF01706 FliG C-terminal domain XC_RS11380 PF14842 FliG N-terminal domain XC_RS11390 PF18269 T3SS EscN ATPase C-terminal domain XC_RS11390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XC_RS11410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XC_RS11410 PF02154 Flagellar motor switch protein FliM XC_RS11415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XC_RS11420 PF04347 Flagellar biosynthesis protein, FliO XC_RS11425 PF00813 FliP family XC_RS11435 PF01313 Bacterial export proteins, family 3 XC_RS11440 PF01311 Bacterial export proteins, family 1 XC_RS11445 PF00990 Diguanylate cyclase, GGDEF domain XC_RS11450 PF00990 Diguanylate cyclase, GGDEF domain XC_RS11455 PF00990 Diguanylate cyclase, GGDEF domain XC_RS11455 PF00563 EAL domain XC_RS11455 PF03707 Bacterial signalling protein N terminal repeat XC_RS11460 PF01312 FlhB HrpN YscU SpaS Family XC_RS11465 PF00771 FHIPEP family XC_RS11470 PF00448 SRP54-type protein, GTPase domain XC_RS11475 PF10609 NUBPL iron-transfer P-loop NTPase XC_RS11480 PF04542 Sigma-70 region 2 XC_RS11480 PF04545 Sigma-70, region 4 XC_RS11480 PF04539 Sigma-70 region 3 XC_RS11485 PF00072 Response regulator receiver domain XC_RS11490 PF04344 Chemotaxis phosphatase, CheZ XC_RS11495 PF01584 CheW-like domain XC_RS11495 PF02895 Signal transducing histidine kinase, homodimeric domain XC_RS11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS11495 PF01627 Hpt domain XC_RS11495 PF00072 Response regulator receiver domain XC_RS11535 PF05598 Transposase domain (DUF772) XC_RS11545 PF03239 Iron permease FTR1 family XC_RS11560 PF01618 MotA/TolQ/ExbB proton channel family XC_RS11565 PF13677 Membrane MotB of proton-channel complex MotA/MotB XC_RS11565 PF00691 OmpA family XC_RS11570 PF13614 AAA domain XC_RS11575 PF01584 CheW-like domain XC_RS11585 PF00072 Response regulator receiver domain XC_RS11590 PF01584 CheW-like domain XC_RS11590 PF02895 Signal transducing histidine kinase, homodimeric domain XC_RS11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS11590 PF09078 CheY binding XC_RS11590 PF01627 Hpt domain XC_RS11595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS11595 PF02203 Tar ligand binding domain homologue XC_RS11595 PF00672 HAMP domain XC_RS11610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS11610 PF00672 HAMP domain XC_RS11610 PF02203 Tar ligand binding domain homologue XC_RS11615 PF02203 Tar ligand binding domain homologue XC_RS11615 PF00672 HAMP domain XC_RS11615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS11620 PF00672 HAMP domain XC_RS11620 PF02203 Tar ligand binding domain homologue XC_RS11620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS11630 PF02203 Tar ligand binding domain homologue XC_RS11630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS11630 PF00672 HAMP domain XC_RS11640 PF07238 PilZ domain XC_RS11640 PF07317 Flagellar regulator YcgR XC_RS11645 PF01584 CheW-like domain XC_RS11655 PF00672 HAMP domain XC_RS11655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS11655 PF02203 Tar ligand binding domain homologue XC_RS11660 PF03705 CheR methyltransferase, all-alpha domain XC_RS11660 PF01739 CheR methyltransferase, SAM binding domain XC_RS11665 PF03975 CheD chemotactic sensory transduction XC_RS11670 PF01339 CheB methylesterase XC_RS11670 PF00072 Response regulator receiver domain XC_RS11675 PF03707 Bacterial signalling protein N terminal repeat XC_RS11675 PF00563 EAL domain XC_RS11675 PF00990 Diguanylate cyclase, GGDEF domain XC_RS11680 PF00561 alpha/beta hydrolase fold XC_RS11685 PF11791 Aconitate B N-terminal domain XC_RS11685 PF06434 Aconitate hydratase 2 N-terminus XC_RS11685 PF00330 Aconitase family (aconitate hydratase) XC_RS11700 PF00694 Aconitase C-terminal domain XC_RS11700 PF00330 Aconitase family (aconitate hydratase) XC_RS11710 PF13193 AMP-binding enzyme C-terminal domain XC_RS11710 PF00501 AMP-binding enzyme XC_RS11715 PF00378 Enoyl-CoA hydratase/isomerase XC_RS11720 PF00512 His Kinase A (phospho-acceptor) domain XC_RS11720 PF01627 Hpt domain XC_RS11720 PF00072 Response regulator receiver domain XC_RS11720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS11725 PF01627 Hpt domain XC_RS11725 PF00072 Response regulator receiver domain XC_RS11725 PF00512 His Kinase A (phospho-acceptor) domain XC_RS11725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS11730 PF00072 Response regulator receiver domain XC_RS11735 PF00152 tRNA synthetases class II (D, K and N) XC_RS11735 PF01336 OB-fold nucleic acid binding domain XC_RS11740 PF00472 RF-1 domain XC_RS11740 PF03462 PCRF domain XC_RS11745 PF04397 LytTr DNA-binding domain XC_RS11745 PF00072 Response regulator receiver domain XC_RS11770 PF01368 DHH family XC_RS11770 PF02272 DHHA1 domain XC_RS11770 PF17768 RecJ OB domain XC_RS11780 PF01272 Transcription elongation factor, GreA/GreB, C-term XC_RS11780 PF03449 Transcription elongation factor, N-terminal XC_RS11785 PF02142 MGS-like domain XC_RS11785 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XC_RS11785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XC_RS11795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XC_RS11795 PF00117 Glutamine amidotransferase class-I XC_RS11800 PF05173 Dihydrodipicolinate reductase, C-terminus XC_RS11800 PF01113 Dihydrodipicolinate reductase, N-terminus XC_RS11805 PF03475 3-alpha domain XC_RS11805 PF03473 MOSC domain XC_RS11810 PF00155 Aminotransferase class I and II XC_RS11825 PF07664 Ferrous iron transport protein B C terminus XC_RS11825 PF02421 Ferrous iron transport protein B XC_RS11825 PF07670 Nucleoside recognition XC_RS11835 PF00378 Enoyl-CoA hydratase/isomerase XC_RS11840 PF00682 HMGL-like XC_RS11845 PF00106 short chain dehydrogenase XC_RS11850 PF01132 Elongation factor P (EF-P) OB domain XC_RS11850 PF08207 Elongation factor P (EF-P) KOW-like domain XC_RS11850 PF09285 Elongation factor P, C-terminal XC_RS11870 PF01565 FAD binding domain XC_RS11870 PF02913 FAD linked oxidases, C-terminal domain XC_RS11875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XC_RS11875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XC_RS11890 PF13520 Amino acid permease XC_RS11895 PF13520 Amino acid permease XC_RS11900 PF00596 Class II Aldolase and Adducin N-terminal domain XC_RS11905 PF03079 ARD/ARD' family XC_RS11925 PF01502 Phosphoribosyl-AMP cyclohydrolase XC_RS11925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XC_RS11930 PF00977 Histidine biosynthesis protein XC_RS11935 PF00977 Histidine biosynthesis protein XC_RS11940 PF00117 Glutamine amidotransferase class-I XC_RS11945 PF00475 Imidazoleglycerol-phosphate dehydratase XC_RS11950 PF00155 Aminotransferase class I and II XC_RS11955 PF00815 Histidinol dehydrogenase XC_RS11960 PF08029 HisG, C-terminal domain XC_RS11960 PF01634 ATP phosphoribosyltransferase XC_RS11970 PF03129 Anticodon binding domain XC_RS11970 PF13393 Histidyl-tRNA synthetase XC_RS11975 PF00027 Cyclic nucleotide-binding domain XC_RS11975 PF13545 Crp-like helix-turn-helix domain XC_RS11985 PF14821 Threonine synthase N terminus XC_RS11985 PF00291 Pyridoxal-phosphate dependent enzyme XC_RS11995 PF08544 GHMP kinases C terminal XC_RS11995 PF00288 GHMP kinases N terminal domain XC_RS12000 PF13840 ACT domain XC_RS12000 PF00742 Homoserine dehydrogenase XC_RS12000 PF03447 Homoserine dehydrogenase, NAD binding domain XC_RS12000 PF00696 Amino acid kinase family XC_RS12000 PF01842 ACT domain XC_RS12005 PF03073 TspO/MBR family XC_RS12020 PF13683 Integrase core domain XC_RS12020 PF13276 HTH-like domain XC_RS12025 PF01527 Transposase XC_RS12030 PF05860 haemagglutination activity domain XC_RS12030 PF13332 Hemagglutinin repeat XC_RS12030 PF04829 Pre-toxin domain with VENN motif XC_RS12035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XC_RS12035 PF17287 POTRA domain XC_RS12035 PF08479 POTRA domain, ShlB-type XC_RS12050 PF13195 Protein of unknown function (DUF4011) XC_RS12050 PF13086 AAA domain XC_RS12050 PF13087 AAA domain XC_RS12050 PF13086 AAA domain XC_RS12050 PF13087 AAA domain XC_RS12050 PF13195 Protein of unknown function (DUF4011) XC_RS12070 PF02794 RTX toxin acyltransferase family XC_RS12075 PF07690 Major Facilitator Superfamily XC_RS12085 PF00005 ABC transporter XC_RS12085 PF03412 Peptidase C39 family XC_RS12085 PF00664 ABC transporter transmembrane region XC_RS12135 PF02534 Type IV secretory system Conjugative DNA transfer XC_RS12255 PF00171 Aldehyde dehydrogenase family XC_RS12270 PF01180 Dihydroorotate dehydrogenase XC_RS12275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XC_RS12275 PF01565 FAD binding domain XC_RS12280 PF00892 EamA-like transporter family XC_RS12285 PF01177 Asp/Glu/Hydantoin racemase XC_RS12295 PF01569 PAP2 superfamily XC_RS12300 PF04551 GcpE protein XC_RS12310 PF00072 Response regulator receiver domain XC_RS12315 PF02013 Cellulose or protein binding domain XC_RS12315 PF00150 Cellulase (glycosyl hydrolase family 5) XC_RS12320 PF00990 Diguanylate cyclase, GGDEF domain XC_RS12320 PF01590 GAF domain XC_RS12320 PF00563 EAL domain XC_RS12320 PF00360 Phytochrome region XC_RS12325 PF00474 Sodium:solute symporter family XC_RS12330 PF14310 Fibronectin type III-like domain XC_RS12330 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS12330 PF01915 Glycosyl hydrolase family 3 C-terminal domain XC_RS12350 PF00342 Phosphoglucose isomerase XC_RS12355 PF02261 Aspartate decarboxylase XC_RS12360 PF02569 Pantoate-beta-alanine ligase XC_RS12365 PF02548 Ketopantoate hydroxymethyltransferase XC_RS12370 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XC_RS12375 PF12627 Probable RNA and SrmB- binding site of polymerase A XC_RS12375 PF01743 Poly A polymerase head domain XC_RS12375 PF12626 Polymerase A arginine-rich C-terminus XC_RS12385 PF02649 Type I GTP cyclohydrolase folE2 XC_RS12390 PF01520 N-acetylmuramoyl-L-alanine amidase XC_RS12410 PF00083 Sugar (and other) transporter XC_RS12420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XC_RS12420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XC_RS12430 PF01055 Glycosyl hydrolases family 31 XC_RS12430 PF17137 Domain of unknown function (DUF5110) XC_RS12430 PF16338 Domain of unknown function (DUF4968) XC_RS12445 PF00942 Cellulose binding domain XC_RS12445 PF03442 Carbohydrate binding domain X2 XC_RS12460 PF03466 LysR substrate binding domain XC_RS12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS12465 PF01081 KDPG and KHG aldolase XC_RS12470 PF13378 Enolase C-terminal domain-like XC_RS12470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XC_RS12475 PF08450 SMP-30/Gluconolactonase/LRE-like region XC_RS12480 PF05035 2-keto-3-deoxy-galactonokinase XC_RS12485 PF00037 4Fe-4S binding domain XC_RS12485 PF11953 Domain of unknown function (DUF3470) XC_RS12495 PF00701 Dihydrodipicolinate synthetase family XC_RS12510 PF00578 AhpC/TSA family XC_RS12515 PF13638 PIN domain XC_RS12515 PF02562 PhoH-like protein XC_RS12525 PF02581 Thiamine monophosphate synthase XC_RS12525 PF08543 Phosphomethylpyrimidine kinase XC_RS12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS12550 PF03466 LysR substrate binding domain XC_RS12555 PF02678 Pirin XC_RS12555 PF17954 Quercetinase C-terminal cupin domain XC_RS12560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XC_RS12560 PF08447 PAS fold XC_RS12560 PF13426 PAS domain XC_RS12570 PF02599 Global regulator protein family XC_RS12575 PF02272 DHHA1 domain XC_RS12575 PF01411 tRNA synthetases class II (A) XC_RS12575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XC_RS12580 PF02631 RecX family XC_RS12585 PF00154 recA bacterial DNA recombination protein XC_RS12590 PF00717 Peptidase S24-like XC_RS12590 PF01726 LexA DNA binding domain XC_RS12595 PF03109 ABC1 family XC_RS12605 PF07715 TonB-dependent Receptor Plug Domain XC_RS12605 PF00593 TonB dependent receptor XC_RS12610 PF02464 Competence-damaged protein XC_RS12615 PF01926 50S ribosome-binding GTPase XC_RS12615 PF13167 GTP-binding GTPase N-terminal XC_RS12615 PF16360 GTP-binding GTPase Middle Region XC_RS12620 PF17209 Hfq protein XC_RS12630 PF00809 Pterin binding enzyme XC_RS12635 PF01434 Peptidase family M41 XC_RS12635 PF17862 AAA+ lid domain XC_RS12635 PF00004 ATPase family associated with various cellular activities (AAA) XC_RS12635 PF06480 FtsH Extracellular XC_RS12640 PF01728 FtsJ-like methyltransferase XC_RS12645 PF01985 CRS1 / YhbY (CRM) domain XC_RS12650 PF04430 Protein of unknown function (DUF498/DUF598) XC_RS12655 PF01476 LysM domain XC_RS12655 PF01551 Peptidase family M23 XC_RS12660 PF09335 SNARE associated Golgi protein XC_RS12670 PF01975 Survival protein SurE XC_RS12675 PF01713 Smr domain XC_RS12680 PF01142 tRNA pseudouridine synthase D (TruD) XC_RS12685 PF02542 YgbB family XC_RS12690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XC_RS12695 PF04977 Septum formation initiator XC_RS12700 PF03952 Enolase, N-terminal domain XC_RS12700 PF00113 Enolase, C-terminal TIM barrel domain XC_RS12710 PF00793 DAHP synthetase I family XC_RS12715 PF06418 CTP synthase N-terminus XC_RS12715 PF00117 Glutamine amidotransferase class-I XC_RS12725 PF00204 DNA gyrase B XC_RS12725 PF01751 Toprim domain XC_RS12725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS12725 PF00986 DNA gyrase B subunit, carboxyl terminus XC_RS12730 PF02611 CDP-diacylglycerol pyrophosphatase XC_RS12745 PF01384 Phosphate transporter family XC_RS12755 PF00571 CBS domain XC_RS12755 PF01595 Cyclin M transmembrane N-terminal domain XC_RS12755 PF03471 Transporter associated domain XC_RS12770 PF00296 Luciferase-like monooxygenase XC_RS12775 PF07690 Major Facilitator Superfamily XC_RS12780 PF00664 ABC transporter transmembrane region XC_RS12780 PF00005 ABC transporter XC_RS12800 PF13579 Glycosyl transferase 4-like domain XC_RS12800 PF00534 Glycosyl transferases group 1 XC_RS12805 PF00534 Glycosyl transferases group 1 XC_RS12805 PF13439 Glycosyltransferase Family 4 XC_RS12815 PF01979 Amidohydrolase family XC_RS12815 PF13382 Adenine deaminase C-terminal domain XC_RS12835 PF00535 Glycosyl transferase family 2 XC_RS12840 PF01943 Polysaccharide biosynthesis protein XC_RS12845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XC_RS12850 PF05523 WxcM-like, C-terminal XC_RS12855 PF01292 Prokaryotic cytochrome b561 XC_RS12865 PF00034 Cytochrome c XC_RS12875 PF08281 Sigma-70, region 4 XC_RS12875 PF04542 Sigma-70 region 2 XC_RS12885 PF00082 Subtilase family XC_RS12890 PF01578 Cytochrome C assembly protein XC_RS12895 PF04995 Heme exporter protein D (CcmD) XC_RS12900 PF03100 CcmE XC_RS12905 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XC_RS12905 PF01578 Cytochrome C assembly protein XC_RS12910 PF08534 Redoxin XC_RS12915 PF03918 Cytochrome C biogenesis protein XC_RS12925 PF00072 Response regulator receiver domain XC_RS12925 PF13426 PAS domain XC_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS12930 PF06745 KaiC XC_RS12935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XC_RS12935 PF00672 HAMP domain XC_RS12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS12935 PF00512 His Kinase A (phospho-acceptor) domain XC_RS12935 PF01627 Hpt domain XC_RS12935 PF00072 Response regulator receiver domain XC_RS12940 PF13188 PAS domain XC_RS12940 PF00512 His Kinase A (phospho-acceptor) domain XC_RS12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS12940 PF00072 Response regulator receiver domain XC_RS12940 PF08448 PAS fold XC_RS12975 PF02585 GlcNAc-PI de-N-acetylase XC_RS13020 PF01527 Transposase XC_RS13025 PF13276 HTH-like domain XC_RS13025 PF13683 Integrase core domain XC_RS13040 PF01527 Transposase XC_RS13045 PF13276 HTH-like domain XC_RS13045 PF13333 Integrase core domain XC_RS13045 PF00665 Integrase core domain XC_RS13060 PF00239 Resolvase, N terminal domain XC_RS13060 PF02796 Helix-turn-helix domain of resolvase XC_RS13075 PF13683 Integrase core domain XC_RS13075 PF13276 HTH-like domain XC_RS13080 PF01527 Transposase XC_RS13125 PF04002 RadC-like JAB domain XC_RS13185 PF05598 Transposase domain (DUF772) XC_RS13185 PF01609 Transposase DDE domain XC_RS13190 PF13276 HTH-like domain XC_RS13190 PF13683 Integrase core domain XC_RS13195 PF01527 Transposase XC_RS13200 PF01527 Transposase XC_RS13205 PF13276 HTH-like domain XC_RS13205 PF13683 Integrase core domain XC_RS13215 PF13276 HTH-like domain XC_RS13215 PF13683 Integrase core domain XC_RS13220 PF01527 Transposase XC_RS13260 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) XC_RS13275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS13275 PF03466 LysR substrate binding domain XC_RS13280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XC_RS13280 PF02403 Seryl-tRNA synthetase N-terminal domain XC_RS13285 PF03544 Gram-negative bacterial TonB protein C-terminal XC_RS13290 PF03544 Gram-negative bacterial TonB protein C-terminal XC_RS13295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XC_RS13300 PF00800 Prephenate dehydratase XC_RS13300 PF01817 Chorismate mutase type II XC_RS13300 PF01842 ACT domain XC_RS13305 PF00266 Aminotransferase class-V XC_RS13310 PF00174 Oxidoreductase molybdopterin binding domain XC_RS13315 PF01794 Ferric reductase like transmembrane component XC_RS13340 PF07702 UTRA domain XC_RS13340 PF00392 Bacterial regulatory proteins, gntR family XC_RS13350 PF01979 Amidohydrolase family XC_RS13355 PF00221 Aromatic amino acid lyase XC_RS13365 PF01175 Urocanase Rossmann-like domain XC_RS13365 PF17392 Urocanase C-terminal domain XC_RS13365 PF17391 Urocanase N-terminal domain XC_RS13375 PF13360 PQQ-like domain XC_RS13380 PF00521 DNA gyrase/topoisomerase IV, subunit A XC_RS13380 PF03989 DNA gyrase C-terminal domain, beta-propeller XC_RS13385 PF01008 Initiation factor 2 subunit family XC_RS13395 PF00152 tRNA synthetases class II (D, K and N) XC_RS13400 PF12826 Helix-hairpin-helix motif XC_RS13400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XC_RS13400 PF03120 NAD-dependent DNA ligase OB-fold domain XC_RS13400 PF01653 NAD-dependent DNA ligase adenylation domain XC_RS13400 PF00533 BRCA1 C Terminus (BRCT) domain XC_RS13405 PF00155 Aminotransferase class I and II XC_RS13410 PF04354 ZipA, C-terminal FtsZ-binding domain XC_RS13415 PF02463 RecF/RecN/SMC N terminal domain XC_RS13425 PF01281 Ribosomal protein L9, N-terminal domain XC_RS13425 PF03948 Ribosomal protein L9, C-terminal domain XC_RS13430 PF01084 Ribosomal protein S18 XC_RS13435 PF01250 Ribosomal protein S6 XC_RS13440 PF01521 Iron-sulphur cluster biosynthesis XC_RS13445 PF00152 tRNA synthetases class II (D, K and N) XC_RS13445 PF01336 OB-fold nucleic acid binding domain XC_RS13470 PF00484 Carbonic anhydrase XC_RS13475 PF06052 3-hydroxyanthranilic acid dioxygenase XC_RS13485 PF00266 Aminotransferase class-V XC_RS13490 PF01494 FAD binding domain XC_RS13495 PF00929 Exonuclease XC_RS13495 PF08411 Exonuclease C-terminal XC_RS13520 PF01513 ATP-NAD kinase XC_RS13525 PF10672 S-adenosylmethionine-dependent methyltransferase XC_RS13525 PF02926 THUMP domain XC_RS13525 PF01170 Putative RNA methylase family UPF0020 XC_RS13530 PF00005 ABC transporter XC_RS13530 PF12848 ABC transporter XC_RS13565 PF00581 Rhodanese-like domain XC_RS13570 PF00293 NUDIX domain XC_RS13575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XC_RS13575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XC_RS13580 PF00378 Enoyl-CoA hydratase/isomerase XC_RS13590 PF10576 Iron-sulfur binding domain of endonuclease III XC_RS13590 PF00633 Helix-hairpin-helix motif XC_RS13590 PF00730 HhH-GPD superfamily base excision DNA repair protein XC_RS13595 PF01740 STAS domain XC_RS13595 PF00916 Sulfate permease family XC_RS13600 PF00484 Carbonic anhydrase XC_RS13615 PF12849 PBP superfamily domain XC_RS13620 PF12849 PBP superfamily domain XC_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS13630 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS13635 PF00005 ABC transporter XC_RS13640 PF01895 PhoU domain XC_RS13650 PF00929 Exonuclease XC_RS13655 PF00990 Diguanylate cyclase, GGDEF domain XC_RS13660 PF08032 RNA 2'-O ribose methyltransferase substrate binding XC_RS13660 PF00588 SpoU rRNA Methylase family XC_RS13670 PF17876 Cold shock domain XC_RS13670 PF08461 Ribonuclease R winged-helix domain XC_RS13670 PF08206 Ribonuclease B OB domain XC_RS13670 PF00575 S1 RNA binding domain XC_RS13670 PF00773 RNB domain XC_RS13685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS13685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS13685 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS13690 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS13690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS13690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS13695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS13695 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS13695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS13700 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS13700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS13700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS13705 PF01209 ubiE/COQ5 methyltransferase family XC_RS13710 PF02574 Homocysteine S-methyltransferase XC_RS13710 PF00809 Pterin binding enzyme XC_RS13715 PF02607 B12 binding domain XC_RS13715 PF02965 Vitamin B12 dependent methionine synthase, activation domain XC_RS13715 PF02310 B12 binding domain XC_RS13715 PF00809 Pterin binding enzyme XC_RS13715 PF02574 Homocysteine S-methyltransferase XC_RS13725 PF00294 pfkB family carbohydrate kinase XC_RS13730 PF07690 Major Facilitator Superfamily XC_RS13735 PF00356 Bacterial regulatory proteins, lacI family XC_RS13755 PF04102 SlyX XC_RS13760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XC_RS13760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XC_RS13760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XC_RS13765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XC_RS13765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XC_RS13770 PF00255 Glutathione peroxidase XC_RS13775 PF00392 Bacterial regulatory proteins, gntR family XC_RS13780 PF00005 ABC transporter XC_RS13805 PF10415 Fumarase C C-terminus XC_RS13805 PF00206 Lyase XC_RS13810 PF01595 Cyclin M transmembrane N-terminal domain XC_RS13810 PF00571 CBS domain XC_RS13810 PF03471 Transporter associated domain XC_RS13815 PF08328 Adenylosuccinate lyase C-terminal XC_RS13815 PF00206 Lyase XC_RS13830 PF08007 Cupin superfamily protein XC_RS13840 PF16078 2-oxoglutarate dehydrogenase N-terminus XC_RS13840 PF00676 Dehydrogenase E1 component XC_RS13840 PF16870 2-oxoglutarate dehydrogenase C-terminal XC_RS13840 PF02779 Transketolase, pyrimidine binding domain XC_RS13845 PF02817 e3 binding domain XC_RS13845 PF00364 Biotin-requiring enzyme XC_RS13845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XC_RS13850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XC_RS13850 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS13855 PF03641 Possible lysine decarboxylase XC_RS13860 PF01205 Uncharacterized protein family UPF0029 XC_RS13865 PF00664 ABC transporter transmembrane region XC_RS13865 PF00005 ABC transporter XC_RS13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS13870 PF03466 LysR substrate binding domain XC_RS13875 PF00005 ABC transporter XC_RS13875 PF03412 Peptidase C39 family XC_RS13875 PF00664 ABC transporter transmembrane region XC_RS13900 PF08543 Phosphomethylpyrimidine kinase XC_RS13905 PF00684 DnaJ central domain XC_RS13905 PF01556 DnaJ C terminal domain XC_RS13905 PF00226 DnaJ domain XC_RS13910 PF00012 Hsp70 protein XC_RS13915 PF01025 GrpE XC_RS13920 PF01628 HrcA protein C terminal domain XC_RS13920 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XC_RS13925 PF02463 RecF/RecN/SMC N terminal domain XC_RS13930 PF01475 Ferric uptake regulator family XC_RS13935 PF04355 SmpA / OmlA family XC_RS13940 PF03658 RnfH family Ubiquitin XC_RS13950 PF01668 SmpB protein XC_RS13955 PF00082 Subtilase family XC_RS13990 PF05598 Transposase domain (DUF772) XC_RS14010 PF01527 Transposase XC_RS14015 PF13276 HTH-like domain XC_RS14015 PF13683 Integrase core domain XC_RS14020 PF05598 Transposase domain (DUF772) XC_RS14025 PF12419 SNF2 Helicase protein XC_RS14025 PF00176 SNF2 family N-terminal domain XC_RS14025 PF00271 Helicase conserved C-terminal domain XC_RS14065 PF00990 Diguanylate cyclase, GGDEF domain XC_RS14075 PF00990 Diguanylate cyclase, GGDEF domain XC_RS14080 PF02321 Outer membrane efflux protein XC_RS14090 PF00873 AcrB/AcrD/AcrF family XC_RS14095 PF00529 HlyD membrane-fusion protein of T1SS XC_RS14095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS14105 PF03466 LysR substrate binding domain XC_RS14110 PF00691 OmpA family XC_RS14110 PF05736 OprF membrane domain XC_RS14115 PF03441 FAD binding domain of DNA photolyase XC_RS14115 PF00875 DNA photolyase XC_RS14120 PF00772 DnaB-like helicase N terminal domain XC_RS14120 PF03796 DnaB-like helicase C terminal domain XC_RS14125 PF03358 NADPH-dependent FMN reductase XC_RS14130 PF13537 Glutamine amidotransferase domain XC_RS14130 PF00733 Asparagine synthase XC_RS14135 PF02798 Glutathione S-transferase, N-terminal domain XC_RS14135 PF00043 Glutathione S-transferase, C-terminal domain XC_RS14145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS14145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS14145 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS14160 PF01026 TatD related DNase XC_RS14165 PF00899 ThiF family XC_RS14180 PF00313 'Cold-shock' DNA-binding domain XC_RS14190 PF02253 Phospholipase A1 XC_RS14195 PF00484 Carbonic anhydrase XC_RS14210 PF05681 Fumarate hydratase (Fumerase) XC_RS14210 PF05683 Fumarase C-terminus XC_RS14215 PF00005 ABC transporter XC_RS14220 PF00970 Oxidoreductase FAD-binding domain XC_RS14220 PF00175 Oxidoreductase NAD-binding domain XC_RS14225 PF00255 Glutathione peroxidase XC_RS14230 PF01432 Peptidase family M3 XC_RS14235 PF12802 MarR family XC_RS14260 PF00854 POT family XC_RS14270 PF01915 Glycosyl hydrolase family 3 C-terminal domain XC_RS14270 PF14310 Fibronectin type III-like domain XC_RS14270 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS14290 PF07690 Major Facilitator Superfamily XC_RS14295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS14295 PF00529 HlyD membrane-fusion protein of T1SS XC_RS14300 PF02321 Outer membrane efflux protein XC_RS14315 PF03989 DNA gyrase C-terminal domain, beta-propeller XC_RS14315 PF00521 DNA gyrase/topoisomerase IV, subunit A XC_RS14320 PF05724 Thiopurine S-methyltransferase (TPMT) XC_RS14325 PF00210 Ferritin-like domain XC_RS14330 PF01804 Penicillin amidase XC_RS14335 PF00593 TonB dependent receptor XC_RS14335 PF07715 TonB-dependent Receptor Plug Domain XC_RS14345 PF00733 Asparagine synthase XC_RS14345 PF13537 Glutamine amidotransferase domain XC_RS14355 PF01546 Peptidase family M20/M25/M40 XC_RS14355 PF07687 Peptidase dimerisation domain XC_RS14360 PF03960 ArsC family XC_RS14370 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XC_RS14370 PF14602 Hexapeptide repeat of succinyl-transferase XC_RS14370 PF00132 Bacterial transferase hexapeptide (six repeats) XC_RS14375 PF08335 GlnD PII-uridylyltransferase XC_RS14375 PF01966 HD domain XC_RS14375 PF01909 Nucleotidyltransferase domain XC_RS14380 PF00557 Metallopeptidase family M24 XC_RS14400 PF05229 Spore Coat Protein U domain XC_RS14415 PF00318 Ribosomal protein S2 XC_RS14420 PF00889 Elongation factor TS XC_RS14430 PF00696 Amino acid kinase family XC_RS14435 PF01765 Ribosome recycling factor XC_RS14440 PF01255 Putative undecaprenyl diphosphate synthase XC_RS14450 PF13288 DXP reductoisomerase C-terminal domain XC_RS14450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XC_RS14450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XC_RS14455 PF17820 PDZ domain XC_RS14455 PF02163 Peptidase family M50 XC_RS14460 PF07244 Surface antigen variable number repeat XC_RS14460 PF01103 Surface antigen XC_RS14470 PF00132 Bacterial transferase hexapeptide (six repeats) XC_RS14470 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XC_RS14475 PF07977 FabA-like domain XC_RS14480 PF00132 Bacterial transferase hexapeptide (six repeats) XC_RS14480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XC_RS14485 PF02684 Lipid-A-disaccharide synthetase XC_RS14490 PF01351 Ribonuclease HII XC_RS14495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XC_RS14495 PF14579 Helix-hairpin-helix motif XC_RS14495 PF02811 PHP domain XC_RS14495 PF01336 OB-fold nucleic acid binding domain XC_RS14495 PF07733 Bacterial DNA polymerase III alpha NTPase domain XC_RS14500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XC_RS14510 PF03653 Uncharacterised protein family (UPF0093) XC_RS14530 PF03551 Transcriptional regulator PadR-like family XC_RS14560 PF02592 Putative vitamin uptake transporter XC_RS14570 PF02574 Homocysteine S-methyltransferase XC_RS14575 PF00324 Amino acid permease XC_RS14585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XC_RS14595 PF07715 TonB-dependent Receptor Plug Domain XC_RS14595 PF00593 TonB dependent receptor XC_RS14600 PF01588 Putative tRNA binding domain XC_RS14600 PF09334 tRNA synthetases class I (M) XC_RS14610 PF04060 Putative Fe-S cluster XC_RS14625 PF04545 Sigma-70, region 4 XC_RS14625 PF04542 Sigma-70 region 2 XC_RS14670 PF01042 Endoribonuclease L-PSP XC_RS14680 PF03706 Lysylphosphatidylglycerol synthase TM region XC_RS14680 PF09924 Uncharacterised conserved protein (DUF2156) XC_RS14720 PF07690 Major Facilitator Superfamily XC_RS14725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XC_RS14745 PF03831 PhnA domain XC_RS14745 PF08274 PhnA Zinc-Ribbon XC_RS14755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XC_RS14780 PF04542 Sigma-70 region 2 XC_RS14780 PF08281 Sigma-70, region 4 XC_RS14790 PF01258 Prokaryotic dksA/traR C4-type zinc finger XC_RS14800 PF07043 Protein of unknown function (DUF1328) XC_RS14805 PF01863 Protein of unknown function DUF45 XC_RS14815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XC_RS14815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XC_RS14820 PF03797 Autotransporter beta-domain XC_RS14820 PF00082 Subtilase family XC_RS14825 PF02803 Thiolase, C-terminal domain XC_RS14825 PF00108 Thiolase, N-terminal domain XC_RS14840 PF00990 Diguanylate cyclase, GGDEF domain XC_RS14840 PF00072 Response regulator receiver domain XC_RS14855 PF04675 DNA ligase N terminus XC_RS14855 PF04679 ATP dependent DNA ligase C terminal region XC_RS14855 PF01068 ATP dependent DNA ligase domain XC_RS14865 PF04679 ATP dependent DNA ligase C terminal region XC_RS14865 PF01068 ATP dependent DNA ligase domain XC_RS14865 PF04675 DNA ligase N terminus XC_RS14870 PF00271 Helicase conserved C-terminal domain XC_RS14870 PF00270 DEAD/DEAH box helicase XC_RS14870 PF08494 DEAD/H associated XC_RS14880 PF01494 FAD binding domain XC_RS14885 PF00313 'Cold-shock' DNA-binding domain XC_RS14890 PF01048 Phosphorylase superfamily XC_RS14895 PF00156 Phosphoribosyl transferase domain XC_RS14900 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS14905 PF04244 Deoxyribodipyrimidine photo-lyase-related protein XC_RS14910 PF05430 S-adenosyl-L-methionine-dependent methyltransferase XC_RS14910 PF01266 FAD dependent oxidoreductase XC_RS14915 PF01323 DSBA-like thioredoxin domain XC_RS14920 PF01928 CYTH domain XC_RS14930 PF05958 tRNA (Uracil-5-)-methyltransferase XC_RS14935 PF00486 Transcriptional regulatory protein, C terminal XC_RS14935 PF00072 Response regulator receiver domain XC_RS14940 PF02565 Recombination protein O C terminal XC_RS14940 PF11967 Recombination protein O N terminal XC_RS14945 PF07650 KH domain XC_RS14945 PF01926 50S ribosome-binding GTPase XC_RS14950 PF00035 Double-stranded RNA binding motif XC_RS14950 PF14622 Ribonuclease-III-like XC_RS14960 PF10502 Signal peptidase, peptidase S26 XC_RS14965 PF00009 Elongation factor Tu GTP binding domain XC_RS14965 PF03144 Elongation factor Tu domain 2 XC_RS14965 PF00679 Elongation factor G C-terminus XC_RS14965 PF06421 GTP-binding protein LepA C-terminus XC_RS14970 PF13180 PDZ domain XC_RS14980 PF04542 Sigma-70 region 2 XC_RS14980 PF08281 Sigma-70, region 4 XC_RS14985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XC_RS14985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XC_RS14985 PF00378 Enoyl-CoA hydratase/isomerase XC_RS14990 PF01545 Cation efflux family XC_RS14995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XC_RS14995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XC_RS15000 PF00378 Enoyl-CoA hydratase/isomerase XC_RS15005 PF00378 Enoyl-CoA hydratase/isomerase XC_RS15010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XC_RS15010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XC_RS15010 PF02770 Acyl-CoA dehydrogenase, middle domain XC_RS15015 PF00171 Aldehyde dehydrogenase family XC_RS15020 PF09856 Predicted transcriptional regulator (DUF2083) XC_RS15020 PF01381 Helix-turn-helix XC_RS15020 PF06114 IrrE N-terminal-like domain XC_RS15030 PF07745 Glycosyl hydrolase family 53 XC_RS15035 PF00703 Glycosyl hydrolases family 2 XC_RS15035 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XC_RS15035 PF16355 Domain of unknown function (DUF4982) XC_RS15035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XC_RS15035 PF02837 Glycosyl hydrolases family 2, sugar binding domain XC_RS15040 PF05598 Transposase domain (DUF772) XC_RS15065 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS15065 PF14310 Fibronectin type III-like domain XC_RS15065 PF01915 Glycosyl hydrolase family 3 C-terminal domain XC_RS15075 PF01609 Transposase DDE domain XC_RS15075 PF05598 Transposase domain (DUF772) XC_RS15110 PF01464 Transglycosylase SLT domain XC_RS15120 PF00263 Bacterial type II and III secretion system protein XC_RS15120 PF03958 Bacterial type II/III secretion system short domain XC_RS15135 PF02874 ATP synthase alpha/beta family, beta-barrel domain XC_RS15135 PF18269 T3SS EscN ATPase C-terminal domain XC_RS15135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XC_RS15150 PF01514 Secretory protein of YscJ/FliF family XC_RS15165 PF01312 FlhB HrpN YscU SpaS Family XC_RS15170 PF00771 FHIPEP family XC_RS15185 PF00813 FliP family XC_RS15190 PF01313 Bacterial export proteins, family 3 XC_RS15220 PF03211 Pectate lyase XC_RS15230 PF05819 NolX protein XC_RS15240 PF00440 Bacterial regulatory proteins, tetR family XC_RS15245 PF00155 Aminotransferase class I and II XC_RS15255 PF00266 Aminotransferase class-V XC_RS15265 PF03301 Tryptophan 2,3-dioxygenase XC_RS15270 PF03301 Tryptophan 2,3-dioxygenase XC_RS15285 PF05188 MutS domain II XC_RS15285 PF05192 MutS domain III XC_RS15285 PF00488 MutS domain V XC_RS15285 PF01624 MutS domain I XC_RS15285 PF05190 MutS family domain IV XC_RS15295 PF00141 Peroxidase XC_RS15300 PF01479 S4 domain XC_RS15305 PF01554 MatE XC_RS15310 PF01245 Ribosomal protein L19 XC_RS15315 PF01746 tRNA (Guanine-1)-methyltransferase XC_RS15320 PF05239 PRC-barrel domain XC_RS15320 PF01782 RimM N-terminal domain XC_RS15325 PF00886 Ribosomal protein S16 XC_RS15335 PF03060 Nitronate monooxygenase XC_RS15340 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) XC_RS15350 PF02978 Signal peptide binding domain XC_RS15350 PF02881 SRP54-type protein, helical bundle domain XC_RS15350 PF00448 SRP54-type protein, GTPase domain XC_RS15355 PF01578 Cytochrome C assembly protein XC_RS15360 PF01263 Aldose 1-epimerase XC_RS15365 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XC_RS15370 PF03466 LysR substrate binding domain XC_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS15385 PF00072 Response regulator receiver domain XC_RS15390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS15390 PF13426 PAS domain XC_RS15390 PF00072 Response regulator receiver domain XC_RS15395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XC_RS15395 PF00672 HAMP domain XC_RS15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS15395 PF00512 His Kinase A (phospho-acceptor) domain XC_RS15395 PF01627 Hpt domain XC_RS15395 PF00072 Response regulator receiver domain XC_RS15400 PF03705 CheR methyltransferase, all-alpha domain XC_RS15400 PF01739 CheR methyltransferase, SAM binding domain XC_RS15405 PF01339 CheB methylesterase XC_RS15410 PF02702 Osmosensitive K+ channel His kinase sensor domain XC_RS15410 PF00512 His Kinase A (phospho-acceptor) domain XC_RS15410 PF13492 GAF domain XC_RS15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS15410 PF13493 Domain of unknown function (DUF4118) XC_RS15415 PF07237 Protein of unknown function (DUF1428) XC_RS15420 PF00085 Thioredoxin XC_RS15425 PF00593 TonB dependent receptor XC_RS15425 PF07715 TonB-dependent Receptor Plug Domain XC_RS15435 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XC_RS15435 PF04616 Glycosyl hydrolases family 43 XC_RS15445 PF00512 His Kinase A (phospho-acceptor) domain XC_RS15445 PF08448 PAS fold XC_RS15445 PF13188 PAS domain XC_RS15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS15445 PF00072 Response regulator receiver domain XC_RS15450 PF00512 His Kinase A (phospho-acceptor) domain XC_RS15450 PF00672 HAMP domain XC_RS15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS15450 PF00072 Response regulator receiver domain XC_RS15450 PF01627 Hpt domain XC_RS15450 PF17149 Periplasmic sensor domain found in signal transduction proteins XC_RS15460 PF13581 Histidine kinase-like ATPase domain XC_RS15465 PF01740 STAS domain XC_RS15470 PF01740 STAS domain XC_RS15470 PF08678 Rsbr N terminal XC_RS15475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XC_RS15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS15485 PF00183 Hsp90 protein XC_RS15490 PF12833 Helix-turn-helix domain XC_RS15505 PF05656 Protein of unknown function (DUF805) XC_RS15510 PF18073 Rubredoxin metal binding domain XC_RS15520 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XC_RS15525 PF00510 Cytochrome c oxidase subunit III XC_RS15530 PF00115 Cytochrome C and Quinol oxidase polypeptide I XC_RS15535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XC_RS15535 PF06481 COX Aromatic Rich Motif XC_RS15545 PF02401 LytB protein XC_RS15550 PF01252 Signal peptidase (SPase) II XC_RS15555 PF00133 tRNA synthetases class I (I, L, M and V) XC_RS15555 PF08264 Anticodon-binding domain of tRNA XC_RS15555 PF06827 Zinc finger found in FPG and IleRS XC_RS15560 PF01687 Riboflavin kinase XC_RS15560 PF06574 FAD synthetase XC_RS15565 PF03023 Lipid II flippase MurJ XC_RS15570 PF01649 Ribosomal protein S20 XC_RS15575 PF01926 50S ribosome-binding GTPase XC_RS15575 PF01018 GTP1/OBG XC_RS15580 PF01016 Ribosomal L27 protein XC_RS15585 PF00829 Ribosomal prokaryotic L21 protein XC_RS15590 PF17755 UvrA DNA-binding domain XC_RS15590 PF17760 UvrA interaction domain XC_RS15590 PF00005 ABC transporter XC_RS15600 PF00378 Enoyl-CoA hydratase/isomerase XC_RS15615 PF08281 Sigma-70, region 4 XC_RS15615 PF04542 Sigma-70 region 2 XC_RS15625 PF04376 Arginine-tRNA-protein transferase, N terminus XC_RS15625 PF04377 Arginine-tRNA-protein transferase, C terminus XC_RS15650 PF05598 Transposase domain (DUF772) XC_RS15655 PF01370 NAD dependent epimerase/dehydratase family XC_RS15655 PF02222 ATP-grasp domain XC_RS15685 PF00730 HhH-GPD superfamily base excision DNA repair protein XC_RS15710 PF00196 Bacterial regulatory proteins, luxR family XC_RS15710 PF00072 Response regulator receiver domain XC_RS15715 PF07730 Histidine kinase XC_RS15725 PF03775 Septum formation inhibitor MinC, C-terminal domain XC_RS15725 PF05209 Septum formation inhibitor MinC, N-terminal domain XC_RS15730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XC_RS15735 PF03776 Septum formation topological specificity factor MinE XC_RS15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS15745 PF00512 His Kinase A (phospho-acceptor) domain XC_RS15750 PF00072 Response regulator receiver domain XC_RS15750 PF00486 Transcriptional regulatory protein, C terminal XC_RS15765 PF08019 Phosphoethanolamine transferase EptA/EptB XC_RS15765 PF00884 Sulfatase XC_RS15785 PF07690 Major Facilitator Superfamily XC_RS15790 PF02347 Glycine cleavage system P-protein XC_RS15810 PF00248 Aldo/keto reductase family XC_RS15815 PF18011 C-terminal domain found in long catalases XC_RS15815 PF06628 Catalase-related immune-responsive XC_RS15815 PF00199 Catalase XC_RS15825 PF12833 Helix-turn-helix domain XC_RS15825 PF02311 AraC-like ligand binding domain XC_RS15840 PF07676 WD40-like Beta Propeller Repeat XC_RS15840 PF00326 Prolyl oligopeptidase family XC_RS15840 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XC_RS15850 PF03169 OPT oligopeptide transporter protein XC_RS15860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XC_RS15860 PF14579 Helix-hairpin-helix motif XC_RS15860 PF02811 PHP domain XC_RS15860 PF07733 Bacterial DNA polymerase III alpha NTPase domain XC_RS15875 PF00717 Peptidase S24-like XC_RS15875 PF01726 LexA DNA binding domain XC_RS15900 PF00111 2Fe-2S iron-sulfur cluster binding domain XC_RS15900 PF01799 [2Fe-2S] binding domain XC_RS15900 PF10518 TAT (twin-arginine translocation) pathway signal sequence XC_RS15905 PF03450 CO dehydrogenase flavoprotein C-terminal domain XC_RS15905 PF00941 FAD binding domain in molybdopterin dehydrogenase XC_RS15910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_RS15910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XC_RS15915 PF14310 Fibronectin type III-like domain XC_RS15915 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS15915 PF01915 Glycosyl hydrolase family 3 C-terminal domain XC_RS15925 PF17755 UvrA DNA-binding domain XC_RS15945 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS15955 PF00106 short chain dehydrogenase XC_RS15960 PF07971 Glycosyl hydrolase family 92 XC_RS15960 PF17678 Glycosyl hydrolase family 92 N-terminal domain XC_RS15975 PF00723 Glycosyl hydrolases family 15 XC_RS15990 PF01256 Carbohydrate kinase XC_RS15995 PF00300 Histidine phosphatase superfamily (branch 1) XC_RS15995 PF13456 Reverse transcriptase-like XC_RS16025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XC_RS16025 PF12008 Type I restriction and modification enzyme - subunit R C terminal XC_RS16025 PF18766 SWI2/SNF2 ATPase XC_RS16030 PF01420 Type I restriction modification DNA specificity domain XC_RS16040 PF02384 N-6 DNA Methylase XC_RS16090 PF01433 Peptidase family M1 domain XC_RS16090 PF11838 ERAP1-like C-terminal domain XC_RS16095 PF00709 Adenylosuccinate synthetase XC_RS16105 PF01145 SPFH domain / Band 7 family XC_RS16110 PF12221 Bacterial membrane protein N terminal XC_RS16110 PF01145 SPFH domain / Band 7 family XC_RS16115 PF00072 Response regulator receiver domain XC_RS16120 PF00226 DnaJ domain XC_RS16120 PF01556 DnaJ C terminal domain XC_RS16125 PF00011 Hsp20/alpha crystallin family XC_RS16130 PF08534 Redoxin XC_RS16140 PF00912 Transglycosylase XC_RS16140 PF06832 Penicillin-Binding Protein C-terminus Family XC_RS16140 PF00905 Penicillin binding protein transpeptidase domain XC_RS16165 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XC_RS16165 PF01835 MG2 domain XC_RS16165 PF17962 Bacterial macroglobulin domain 6 XC_RS16165 PF00207 Alpha-2-macroglobulin family XC_RS16165 PF07703 Alpha-2-macroglobulin bait region domain XC_RS16165 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XC_RS16165 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XC_RS16165 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XC_RS16175 PF07715 TonB-dependent Receptor Plug Domain XC_RS16175 PF00593 TonB dependent receptor XC_RS16180 PF04303 PrpF protein XC_RS16190 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH XC_RS16195 PF00694 Aconitase C-terminal domain XC_RS16195 PF00330 Aconitase family (aconitate hydratase) XC_RS16200 PF00285 Citrate synthase, C-terminal domain XC_RS16210 PF02954 Bacterial regulatory protein, Fis family XC_RS16210 PF06506 Propionate catabolism activator XC_RS16210 PF00158 Sigma-54 interaction domain XC_RS16245 PF09115 DNA polymerase III, delta subunit, C terminal XC_RS16250 PF02618 YceG-like family XC_RS16255 PF04715 Anthranilate synthase component I, N terminal region XC_RS16255 PF00425 chorismate binding enzyme XC_RS16260 PF02801 Beta-ketoacyl synthase, C-terminal domain XC_RS16260 PF00109 Beta-ketoacyl synthase, N-terminal domain XC_RS16265 PF00550 Phosphopantetheine attachment site XC_RS16275 PF00698 Acyl transferase domain XC_RS16280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XC_RS16280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XC_RS16285 PF01783 Ribosomal L32p protein family XC_RS16290 PF02620 Large ribosomal RNA subunit accumulation protein YceD XC_RS16295 PF02545 Maf-like protein XC_RS16315 PF00535 Glycosyl transferase family 2 XC_RS16325 PF17863 AAA lid domain XC_RS16325 PF07726 ATPase family associated with various cellular activities (AAA) XC_RS16335 PF11992 Domain of unknown function (DUF3488) XC_RS16335 PF01841 Transglutaminase-like superfamily XC_RS16335 PF13559 Domain of unknown function (DUF4129) XC_RS16345 PF01230 HIT domain XC_RS16350 PF02132 RecR protein XC_RS16350 PF13662 Toprim domain XC_RS16355 PF02575 YbaB/EbfC DNA-binding family XC_RS16360 PF12170 DNA polymerase III tau subunit V interacting with alpha XC_RS16360 PF12169 DNA polymerase III subunits gamma and tau domain III XC_RS16360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XC_RS16370 PF02391 MoaE protein XC_RS16375 PF02597 ThiS family XC_RS16380 PF01967 MoaC family XC_RS16390 PF04055 Radical SAM superfamily XC_RS16390 PF06463 Molybdenum Cofactor Synthesis C XC_RS16395 PF12706 Beta-lactamase superfamily domain XC_RS16395 PF00753 Metallo-beta-lactamase superfamily XC_RS16405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XC_RS16425 PF00929 Exonuclease XC_RS16430 PF00075 RNase H XC_RS16440 PF00753 Metallo-beta-lactamase superfamily XC_RS16440 PF16123 Hydroxyacylglutathione hydrolase C-terminus XC_RS16445 PF01476 LysM domain XC_RS16445 PF05257 CHAP domain XC_RS16475 PF00216 Bacterial DNA-binding protein XC_RS16480 PF00004 ATPase family associated with various cellular activities (AAA) XC_RS16480 PF05362 Lon protease (S16) C-terminal proteolytic domain XC_RS16480 PF02190 ATP-dependent protease La (LON) substrate-binding domain XC_RS16485 PF06689 ClpX C4-type zinc finger XC_RS16485 PF10431 C-terminal, D2-small domain, of ClpB protein XC_RS16485 PF07724 AAA domain (Cdc48 subfamily) XC_RS16490 PF00574 Clp protease XC_RS16495 PF05697 Bacterial trigger factor protein (TF) XC_RS16495 PF05698 Bacterial trigger factor protein (TF) C-terminus XC_RS16530 PF00180 Isocitrate/isopropylmalate dehydrogenase XC_RS16530 PF18324 Hypothetical protein TT1725 XC_RS16540 PF00462 Glutaredoxin XC_RS16545 PF13181 Tetratricopeptide repeat XC_RS16545 PF01435 Peptidase family M48 XC_RS16550 PF00072 Response regulator receiver domain XC_RS16550 PF00486 Transcriptional regulatory protein, C terminal XC_RS16555 PF11808 Phosphate regulon sensor protein PhoR XC_RS16555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS16555 PF00989 PAS fold XC_RS16555 PF00512 His Kinase A (phospho-acceptor) domain XC_RS16560 PF02503 Polyphosphate kinase middle domain XC_RS16560 PF13090 Polyphosphate kinase C-terminal domain 2 XC_RS16560 PF13089 Polyphosphate kinase N-terminal domain XC_RS16560 PF17941 Polyphosphate kinase C-terminal domain 1 XC_RS16565 PF02541 Ppx/GppA phosphatase family XC_RS16570 PF13439 Glycosyltransferase Family 4 XC_RS16570 PF00534 Glycosyl transferases group 1 XC_RS16575 PF01569 PAP2 superfamily XC_RS16580 PF00149 Calcineurin-like phosphoesterase XC_RS16595 PF04305 Protein of unknown function (DUF455) XC_RS16600 PF00156 Phosphoribosyl transferase domain XC_RS16615 PF08245 Mur ligase middle domain XC_RS16615 PF02875 Mur ligase family, glutamate ligase domain XC_RS16630 PF00300 Histidine phosphatase superfamily (branch 1) XC_RS16635 PF05506 Domain of unknown function (DUF756) XC_RS16635 PF04185 Phosphoesterase family XC_RS16645 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS16645 PF00107 Zinc-binding dehydrogenase XC_RS16655 PF00005 ABC transporter XC_RS16655 PF12857 TOBE-like domain XC_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS16665 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS16675 PF00155 Aminotransferase class I and II XC_RS16685 PF00849 RNA pseudouridylate synthase XC_RS16695 PF05736 OprF membrane domain XC_RS16695 PF00691 OmpA family XC_RS16700 PF00107 Zinc-binding dehydrogenase XC_RS16700 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS16705 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS16705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XC_RS16730 PF02798 Glutathione S-transferase, N-terminal domain XC_RS16730 PF00043 Glutathione S-transferase, C-terminal domain XC_RS16735 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XC_RS16735 PF00056 lactate/malate dehydrogenase, NAD binding domain XC_RS16740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XC_RS16745 PF00679 Elongation factor G C-terminus XC_RS16745 PF00009 Elongation factor Tu GTP binding domain XC_RS16745 PF03144 Elongation factor Tu domain 2 XC_RS16755 PF01425 Amidase XC_RS16765 PF01474 Class-II DAHP synthetase family XC_RS16770 PF02600 Disulfide bond formation protein DsbB XC_RS16775 PF01196 Ribosomal protein L17 XC_RS16780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XC_RS16780 PF01000 RNA polymerase Rpb3/RpoA insert domain XC_RS16780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XC_RS16785 PF01479 S4 domain XC_RS16785 PF00163 Ribosomal protein S4/S9 N-terminal domain XC_RS16790 PF00411 Ribosomal protein S11 XC_RS16795 PF00416 Ribosomal protein S13/S18 XC_RS16800 PF00344 SecY translocase XC_RS16805 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XC_RS16810 PF00327 Ribosomal protein L30p/L7e XC_RS16815 PF03719 Ribosomal protein S5, C-terminal domain XC_RS16815 PF00333 Ribosomal protein S5, N-terminal domain XC_RS16820 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XC_RS16825 PF00347 Ribosomal protein L6 XC_RS16830 PF00410 Ribosomal protein S8 XC_RS16835 PF00253 Ribosomal protein S14p/S29e XC_RS16840 PF00673 ribosomal L5P family C-terminus XC_RS16840 PF00281 Ribosomal protein L5 XC_RS16845 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XC_RS16845 PF00467 KOW motif XC_RS16850 PF00238 Ribosomal protein L14p/L23e XC_RS16855 PF00366 Ribosomal protein S17 XC_RS16860 PF00831 Ribosomal L29 protein XC_RS16865 PF00252 Ribosomal protein L16p/L10e XC_RS16870 PF07650 KH domain XC_RS16870 PF00189 Ribosomal protein S3, C-terminal domain XC_RS16875 PF00237 Ribosomal protein L22p/L17e XC_RS16880 PF00203 Ribosomal protein S19 XC_RS16885 PF00181 Ribosomal Proteins L2, RNA binding domain XC_RS16885 PF03947 Ribosomal Proteins L2, C-terminal domain XC_RS16890 PF00276 Ribosomal protein L23 XC_RS16895 PF00573 Ribosomal protein L4/L1 family XC_RS16900 PF00297 Ribosomal protein L3 XC_RS16905 PF00338 Ribosomal protein S10p/S20e XC_RS16910 PF03143 Elongation factor Tu C-terminal domain XC_RS16910 PF00009 Elongation factor Tu GTP binding domain XC_RS16910 PF03144 Elongation factor Tu domain 2 XC_RS16915 PF03144 Elongation factor Tu domain 2 XC_RS16915 PF00009 Elongation factor Tu GTP binding domain XC_RS16915 PF03764 Elongation factor G, domain IV XC_RS16915 PF14492 Elongation Factor G, domain II XC_RS16915 PF00679 Elongation factor G C-terminus XC_RS16920 PF00177 Ribosomal protein S7p/S5e XC_RS16925 PF00164 Ribosomal protein S12/S23 XC_RS16930 PF04998 RNA polymerase Rpb1, domain 5 XC_RS16930 PF05000 RNA polymerase Rpb1, domain 4 XC_RS16930 PF04983 RNA polymerase Rpb1, domain 3 XC_RS16930 PF04997 RNA polymerase Rpb1, domain 1 XC_RS16930 PF00623 RNA polymerase Rpb1, domain 2 XC_RS16935 PF00562 RNA polymerase Rpb2, domain 6 XC_RS16935 PF04560 RNA polymerase Rpb2, domain 7 XC_RS16935 PF10385 RNA polymerase beta subunit external 1 domain XC_RS16935 PF04561 RNA polymerase Rpb2, domain 2 XC_RS16935 PF04563 RNA polymerase beta subunit XC_RS16935 PF04565 RNA polymerase Rpb2, domain 3 XC_RS16940 PF00542 Ribosomal protein L7/L12 C-terminal domain XC_RS16940 PF16320 Ribosomal protein L7/L12 dimerisation domain XC_RS16945 PF00466 Ribosomal protein L10 XC_RS16950 PF00687 Ribosomal protein L1p/L10e family XC_RS16955 PF03946 Ribosomal protein L11, N-terminal domain XC_RS16955 PF00298 Ribosomal protein L11, RNA binding domain XC_RS16960 PF02357 Transcription termination factor nusG XC_RS16960 PF00467 KOW motif XC_RS16965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XC_RS16975 PF03143 Elongation factor Tu C-terminal domain XC_RS16975 PF00009 Elongation factor Tu GTP binding domain XC_RS16975 PF03144 Elongation factor Tu domain 2 XC_RS16995 PF06071 Protein of unknown function (DUF933) XC_RS16995 PF01926 50S ribosome-binding GTPase XC_RS17000 PF01195 Peptidyl-tRNA hydrolase XC_RS17005 PF01386 Ribosomal L25p family XC_RS17005 PF14693 Ribosomal protein TL5, C-terminal domain XC_RS17010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XC_RS17010 PF14572 Phosphoribosyl synthetase-associated domain XC_RS17020 PF00288 GHMP kinases N terminal domain XC_RS17020 PF08544 GHMP kinases C terminal XC_RS17025 PF03550 Outer membrane lipoprotein LolB XC_RS17035 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XC_RS17035 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XC_RS17035 PF01488 Shikimate / quinate 5-dehydrogenase XC_RS17040 PF03462 PCRF domain XC_RS17040 PF00472 RF-1 domain XC_RS17050 PF00994 Probable molybdopterin binding domain XC_RS17055 PF03976 Polyphosphate kinase 2 (PPK2) XC_RS17065 PF00708 Acylphosphatase XC_RS17070 PF08534 Redoxin XC_RS17075 PF03631 Virulence factor BrkB XC_RS17080 PF03358 NADPH-dependent FMN reductase XC_RS17090 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain XC_RS17090 PF17189 Glycosyl hydrolase family 30 beta sandwich domain XC_RS17100 PF04073 Aminoacyl-tRNA editing domain XC_RS17105 PF04151 Bacterial pre-peptidase C-terminal domain XC_RS17105 PF00082 Subtilase family XC_RS17110 PF04151 Bacterial pre-peptidase C-terminal domain XC_RS17110 PF00082 Subtilase family XC_RS17115 PF00082 Subtilase family XC_RS17115 PF04151 Bacterial pre-peptidase C-terminal domain XC_RS17120 PF00082 Subtilase family XC_RS17120 PF04151 Bacterial pre-peptidase C-terminal domain XC_RS17125 PF01063 Amino-transferase class IV XC_RS17175 PF00881 Nitroreductase family XC_RS17180 PF00476 DNA polymerase family A XC_RS17180 PF01612 3'-5' exonuclease XC_RS17180 PF01367 5'-3' exonuclease, C-terminal SAM fold XC_RS17180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XC_RS17185 PF00293 NUDIX domain XC_RS17195 PF00561 alpha/beta hydrolase fold XC_RS17200 PF05175 Methyltransferase small domain XC_RS17200 PF17827 PrmC N-terminal domain XC_RS17205 PF00578 AhpC/TSA family XC_RS17205 PF10417 C-terminal domain of 1-Cys peroxiredoxin XC_RS17210 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS17210 PF13192 Thioredoxin domain XC_RS17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS17215 PF03466 LysR substrate binding domain XC_RS17220 PF01272 Transcription elongation factor, GreA/GreB, C-term XC_RS17220 PF03449 Transcription elongation factor, N-terminal XC_RS17225 PF00923 Transaldolase/Fructose-6-phosphate aldolase XC_RS17235 PF01625 Peptide methionine sulfoxide reductase XC_RS17245 PF00072 Response regulator receiver domain XC_RS17245 PF00196 Bacterial regulatory proteins, luxR family XC_RS17250 PF00672 HAMP domain XC_RS17250 PF00512 His Kinase A (phospho-acceptor) domain XC_RS17250 PF01627 Hpt domain XC_RS17250 PF00072 Response regulator receiver domain XC_RS17250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XC_RS17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS17255 PF00072 Response regulator receiver domain XC_RS17255 PF00990 Diguanylate cyclase, GGDEF domain XC_RS17270 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XC_RS17270 PF00749 tRNA synthetases class I (E and Q), catalytic domain XC_RS17275 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term XC_RS17275 PF12833 Helix-turn-helix domain XC_RS17280 PF00892 EamA-like transporter family XC_RS17300 PF18125 RlmM ferredoxin-like domain XC_RS17300 PF01728 FtsJ-like methyltransferase XC_RS17305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XC_RS17305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XC_RS17310 PF08450 SMP-30/Gluconolactonase/LRE-like region XC_RS17330 PF00378 Enoyl-CoA hydratase/isomerase XC_RS17340 PF13193 AMP-binding enzyme C-terminal domain XC_RS17340 PF00501 AMP-binding enzyme XC_RS17345 PF03466 LysR substrate binding domain XC_RS17345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS17350 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit XC_RS17350 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XC_RS17355 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XC_RS17360 PF00392 Bacterial regulatory proteins, gntR family XC_RS17360 PF07729 FCD domain XC_RS17380 PF01494 FAD binding domain XC_RS17385 PF01494 FAD binding domain XC_RS17395 PF01923 Cobalamin adenosyltransferase XC_RS17400 PF00850 Histone deacetylase domain XC_RS17405 PF03968 OstA-like protein XC_RS17405 PF04453 LPS transport system D XC_RS17410 PF00639 PPIC-type PPIASE domain XC_RS17410 PF09312 SurA N-terminal domain XC_RS17415 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XC_RS17420 PF00398 Ribosomal RNA adenine dimethylase XC_RS17425 PF04379 ApaG domain XC_RS17430 PF00149 Calcineurin-like phosphoesterase XC_RS17435 PF00186 Dihydrofolate reductase XC_RS17440 PF00303 Thymidylate synthase XC_RS17445 PF01790 Prolipoprotein diacylglyceryl transferase XC_RS17465 PF01219 Prokaryotic diacylglycerol kinase XC_RS17475 PF08521 Two-component sensor kinase N-terminal XC_RS17475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS17475 PF00512 His Kinase A (phospho-acceptor) domain XC_RS17480 PF00486 Transcriptional regulatory protein, C terminal XC_RS17480 PF00072 Response regulator receiver domain XC_RS17485 PF13472 GDSL-like Lipase/Acylhydrolase family XC_RS17490 PF00005 ABC transporter XC_RS17500 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XC_RS17510 PF00005 ABC transporter XC_RS17515 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS17535 PF00593 TonB dependent receptor XC_RS17535 PF07715 TonB-dependent Receptor Plug Domain XC_RS17545 PF00248 Aldo/keto reductase family XC_RS17550 PF07662 Na+ dependent nucleoside transporter C-terminus XC_RS17550 PF01773 Na+ dependent nucleoside transporter N-terminus XC_RS17550 PF07670 Nucleoside recognition XC_RS17555 PF00294 pfkB family carbohydrate kinase XC_RS17555 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XC_RS17560 PF01207 Dihydrouridine synthase (Dus) XC_RS17570 PF00438 S-adenosylmethionine synthetase, N-terminal domain XC_RS17570 PF02772 S-adenosylmethionine synthetase, central domain XC_RS17570 PF02773 S-adenosylmethionine synthetase, C-terminal domain XC_RS17580 PF00328 Histidine phosphatase superfamily (branch 2) XC_RS17590 PF01389 OmpA-like transmembrane domain XC_RS17590 PF00691 OmpA family XC_RS17610 PF00311 Phosphoenolpyruvate carboxylase XC_RS17620 PF05221 S-adenosyl-L-homocysteine hydrolase XC_RS17620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XC_RS17645 PF00128 Alpha amylase, catalytic domain XC_RS17665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XC_RS17675 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS17675 PF00550 Phosphopantetheine attachment site XC_RS17675 PF02801 Beta-ketoacyl synthase, C-terminal domain XC_RS17675 PF00109 Beta-ketoacyl synthase, N-terminal domain XC_RS17675 PF16197 Ketoacyl-synthetase C-terminal extension XC_RS17675 PF14765 Polyketide synthase dehydratase XC_RS17675 PF00107 Zinc-binding dehydrogenase XC_RS17675 PF08659 KR domain XC_RS17675 PF00698 Acyl transferase domain XC_RS17690 PF02219 Methylenetetrahydrofolate reductase XC_RS17705 PF00293 NUDIX domain XC_RS17715 PF07516 SecA Wing and Scaffold domain XC_RS17715 PF01043 SecA preprotein cross-linking domain XC_RS17715 PF07517 SecA DEAD-like domain XC_RS17715 PF02810 SEC-C motif XC_RS17720 PF08525 Opacity-associated protein A N-terminal motif XC_RS17720 PF01476 LysM domain XC_RS17720 PF01551 Peptidase family M23 XC_RS17730 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XC_RS17735 PF00091 Tubulin/FtsZ family, GTPase domain XC_RS17735 PF12327 FtsZ family, C-terminal domain XC_RS17740 PF02491 SHS2 domain inserted in FTSA XC_RS17745 PF03799 Cell division protein FtsQ XC_RS17745 PF08478 POTRA domain, FtsQ-type XC_RS17750 PF01820 D-ala D-ala ligase N-terminus XC_RS17750 PF07478 D-ala D-ala ligase C-terminus XC_RS17755 PF02875 Mur ligase family, glutamate ligase domain XC_RS17755 PF01225 Mur ligase family, catalytic domain XC_RS17755 PF08245 Mur ligase middle domain XC_RS17760 PF03033 Glycosyltransferase family 28 N-terminal domain XC_RS17760 PF04101 Glycosyltransferase family 28 C-terminal domain XC_RS17765 PF01098 Cell cycle protein XC_RS17770 PF00953 Glycosyl transferase family 4 XC_RS17780 PF02875 Mur ligase family, glutamate ligase domain XC_RS17780 PF08245 Mur ligase middle domain XC_RS17780 PF01225 Mur ligase family, catalytic domain XC_RS17785 PF00905 Penicillin binding protein transpeptidase domain XC_RS17785 PF03717 Penicillin-binding Protein dimerisation domain XC_RS17790 PF04999 Cell division protein FtsL XC_RS17795 PF01795 MraW methylase family XC_RS17800 PF02381 MraZ protein, putative antitoxin-like XC_RS17820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XC_RS17830 PF02021 Uncharacterised protein family UPF0102 XC_RS17835 PF04307 LexA-binding, inner membrane-associated putative hydrolase XC_RS17840 PF02913 FAD linked oxidases, C-terminal domain XC_RS17840 PF01565 FAD binding domain XC_RS17850 PF00072 Response regulator receiver domain XC_RS17850 PF00486 Transcriptional regulatory protein, C terminal XC_RS17855 PF13493 Domain of unknown function (DUF4118) XC_RS17855 PF13492 GAF domain XC_RS17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS17855 PF00512 His Kinase A (phospho-acceptor) domain XC_RS17855 PF02702 Osmosensitive K+ channel His kinase sensor domain XC_RS17860 PF02669 K+-transporting ATPase, c chain XC_RS17870 PF03814 Potassium-transporting ATPase A subunit XC_RS17885 PF00586 AIR synthase related protein, N-terminal domain XC_RS17885 PF02769 AIR synthase related protein, C-terminal domain XC_RS17890 PF01029 NusB family XC_RS17895 PF00885 6,7-dimethyl-8-ribityllumazine synthase XC_RS17900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XC_RS17900 PF00925 GTP cyclohydrolase II XC_RS17905 PF00677 Lumazine binding domain XC_RS17915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XC_RS17915 PF01872 RibD C-terminal domain XC_RS17925 PF03477 ATP cone domain XC_RS17930 PF00464 Serine hydroxymethyltransferase XC_RS17940 PF00005 ABC transporter XC_RS17940 PF12848 ABC transporter XC_RS17945 PF01327 Polypeptide deformylase XC_RS17950 PF03960 ArsC family XC_RS17965 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) XC_RS17970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XC_RS17970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XC_RS18005 PF00593 TonB dependent receptor XC_RS18005 PF07715 TonB-dependent Receptor Plug Domain XC_RS18015 PF07702 UTRA domain XC_RS18015 PF00392 Bacterial regulatory proteins, gntR family XC_RS18025 PF03958 Bacterial type II/III secretion system short domain XC_RS18025 PF00263 Bacterial type II and III secretion system protein XC_RS18035 PF10741 Type II secretion system (T2SS), protein M subtype b XC_RS18040 PF05137 Fimbrial assembly protein (PilN) XC_RS18045 PF03934 Type II secretion system (T2SS), protein K XC_RS18055 PF07963 Prokaryotic N-terminal methylation motif XC_RS18060 PF12019 Type II transport protein GspH XC_RS18065 PF08334 Type II secretion system (T2SS), protein G XC_RS18075 PF00482 Type II secretion system (T2SS), protein F XC_RS18080 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XC_RS18080 PF00437 Type II/IV secretion system protein XC_RS18085 PF04151 Bacterial pre-peptidase C-terminal domain XC_RS18085 PF00082 Subtilase family XC_RS18090 PF05658 Head domain of trimeric autotransporter adhesin XC_RS18090 PF03895 YadA-like membrane anchor domain XC_RS18090 PF05662 Coiled stalk of trimeric autotransporter adhesin XC_RS18090 PF13018 Extended Signal Peptide of Type V secretion system XC_RS18105 PF02769 AIR synthase related protein, C-terminal domain XC_RS18105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XC_RS18105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XC_RS18110 PF10411 Disulfide bond isomerase protein N-terminus XC_RS18110 PF13098 Thioredoxin-like domain XC_RS18115 PF02899 Phage integrase, N-terminal SAM-like domain XC_RS18115 PF00589 Phage integrase family XC_RS18130 PF03739 Lipopolysaccharide export system permease LptF/LptG XC_RS18140 PF02789 Cytosol aminopeptidase family, N-terminal domain XC_RS18140 PF00883 Cytosol aminopeptidase family, catalytic domain XC_RS18155 PF00133 tRNA synthetases class I (I, L, M and V) XC_RS18155 PF08264 Anticodon-binding domain of tRNA XC_RS18155 PF10458 Valyl tRNA synthetase tRNA binding arm XC_RS18165 PF00544 Pectate lyase XC_RS18170 PF00544 Pectate lyase XC_RS18185 PF01066 CDP-alcohol phosphatidyltransferase XC_RS18195 PF04073 Aminoacyl-tRNA editing domain XC_RS18195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XC_RS18195 PF03129 Anticodon binding domain XC_RS18200 PF00816 H-NS histone family XC_RS18210 PF02405 Permease MlaE XC_RS18215 PF00005 ABC transporter XC_RS18220 PF03886 ABC-type transport auxiliary lipoprotein component XC_RS18220 PF02470 MlaD protein XC_RS18240 PF05045 Rhamnan synthesis protein F XC_RS18240 PF14307 Glycosyltransferase WbsX XC_RS18245 PF01144 Coenzyme A transferase XC_RS18250 PF01144 Coenzyme A transferase XC_RS18255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XC_RS18255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XC_RS18255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XC_RS18255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XC_RS18260 PF01050 Mannose-6-phosphate isomerase XC_RS18260 PF00483 Nucleotidyl transferase XC_RS18265 PF04321 RmlD substrate binding domain XC_RS18270 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XC_RS18275 PF00483 Nucleotidyl transferase XC_RS18280 PF16363 GDP-mannose 4,6 dehydratase XC_RS18285 PF01012 Electron transfer flavoprotein domain XC_RS18290 PF00766 Electron transfer flavoprotein FAD-binding domain XC_RS18290 PF01012 Electron transfer flavoprotein domain XC_RS18295 PF00483 Nucleotidyl transferase XC_RS18295 PF01050 Mannose-6-phosphate isomerase XC_RS18300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XC_RS18305 PF00535 Glycosyl transferase family 2 XC_RS18330 PF01527 Transposase XC_RS18335 PF13683 Integrase core domain XC_RS18335 PF13276 HTH-like domain XC_RS18345 PF16363 GDP-mannose 4,6 dehydratase XC_RS18350 PF16363 GDP-mannose 4,6 dehydratase XC_RS18365 PF13439 Glycosyltransferase Family 4 XC_RS18365 PF00534 Glycosyl transferases group 1 XC_RS18370 PF13847 Methyltransferase domain XC_RS18370 PF00069 Protein kinase domain XC_RS18375 PF00005 ABC transporter XC_RS18390 PF01053 Cys/Met metabolism PLP-dependent enzyme XC_RS18395 PF00291 Pyridoxal-phosphate dependent enzyme XC_RS18395 PF00571 CBS domain XC_RS18415 PF00437 Type II/IV secretion system protein XC_RS18420 PF14497 Glutathione S-transferase, C-terminal domain XC_RS18420 PF02798 Glutathione S-transferase, N-terminal domain XC_RS18430 PF00270 DEAD/DEAH box helicase XC_RS18430 PF00271 Helicase conserved C-terminal domain XC_RS18435 PF01242 6-pyruvoyl tetrahydropterin synthase XC_RS18450 PF13185 GAF domain XC_RS18460 PF13419 Haloacid dehalogenase-like hydrolase XC_RS18465 PF00817 impB/mucB/samB family XC_RS18465 PF11799 impB/mucB/samB family C-terminal domain XC_RS18465 PF11798 IMS family HHH motif XC_RS18470 PF07977 FabA-like domain XC_RS18475 PF00109 Beta-ketoacyl synthase, N-terminal domain XC_RS18475 PF02801 Beta-ketoacyl synthase, C-terminal domain XC_RS18480 PF01432 Peptidase family M3 XC_RS18485 PF00291 Pyridoxal-phosphate dependent enzyme XC_RS18495 PF07731 Multicopper oxidase XC_RS18495 PF00394 Multicopper oxidase XC_RS18495 PF07732 Multicopper oxidase XC_RS18500 PF05275 Copper resistance protein B precursor (CopB) XC_RS18505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XC_RS18530 PF01380 SIS domain XC_RS18535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS18540 PF00005 ABC transporter XC_RS18545 PF02687 FtsX-like permease family XC_RS18545 PF12704 MacB-like periplasmic core domain XC_RS18545 PF00005 ABC transporter XC_RS18550 PF00005 ABC transporter XC_RS18550 PF12704 MacB-like periplasmic core domain XC_RS18550 PF02687 FtsX-like permease family XC_RS18560 PF00072 Response regulator receiver domain XC_RS18560 PF02954 Bacterial regulatory protein, Fis family XC_RS18560 PF00158 Sigma-54 interaction domain XC_RS18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS18565 PF00512 His Kinase A (phospho-acceptor) domain XC_RS18565 PF00672 HAMP domain XC_RS18570 PF01527 Transposase XC_RS18575 PF13276 HTH-like domain XC_RS18575 PF13683 Integrase core domain XC_RS18585 PF12804 MobA-like NTP transferase domain XC_RS18585 PF00132 Bacterial transferase hexapeptide (six repeats) XC_RS18585 PF14602 Hexapeptide repeat of succinyl-transferase XC_RS18600 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XC_RS18600 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XC_RS18605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XC_RS18605 PF02874 ATP synthase alpha/beta family, beta-barrel domain XC_RS18610 PF00231 ATP synthase XC_RS18615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XC_RS18615 PF00306 ATP synthase alpha/beta chain, C terminal domain XC_RS18615 PF02874 ATP synthase alpha/beta family, beta-barrel domain XC_RS18620 PF00213 ATP synthase delta (OSCP) subunit XC_RS18625 PF00430 ATP synthase B/B' CF(0) XC_RS18630 PF00137 ATP synthase subunit C XC_RS18635 PF00119 ATP synthase A chain XC_RS18650 PF01979 Amidohydrolase family XC_RS18665 PF00364 Biotin-requiring enzyme XC_RS18665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XC_RS18665 PF02817 e3 binding domain XC_RS18700 PF05598 Transposase domain (DUF772) XC_RS18705 PF03180 NLPA lipoprotein XC_RS18710 PF00528 Binding-protein-dependent transport system inner membrane component XC_RS18715 PF00005 ABC transporter XC_RS18715 PF09383 NIL domain XC_RS18720 PF00892 EamA-like transporter family XC_RS18725 PF04461 Protein of unknown function (DUF520) XC_RS18750 PF13419 Haloacid dehalogenase-like hydrolase XC_RS18755 PF00849 RNA pseudouridylate synthase XC_RS18755 PF01479 S4 domain XC_RS18760 PF08468 Methyltransferase small domain N-terminal XC_RS18760 PF05175 Methyltransferase small domain XC_RS18770 PF07995 Glucose / Sorbosone dehydrogenase XC_RS18780 PF00672 HAMP domain XC_RS18780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS18780 PF18698 Histidine kinase sensor domain XC_RS18780 PF00989 PAS fold XC_RS18780 PF00512 His Kinase A (phospho-acceptor) domain XC_RS18800 PF00842 Alanine racemase, C-terminal domain XC_RS18800 PF01168 Alanine racemase, N-terminal domain XC_RS18805 PF01266 FAD dependent oxidoreductase XC_RS18810 PF01037 Lrp/AsnC ligand binding domain XC_RS18820 PF01641 SelR domain XC_RS18830 PF01618 MotA/TolQ/ExbB proton channel family XC_RS18835 PF13677 Membrane MotB of proton-channel complex MotA/MotB XC_RS18835 PF00691 OmpA family XC_RS18860 PF01061 ABC-2 type transporter XC_RS18865 PF00005 ABC transporter XC_RS18870 PF00999 Sodium/hydrogen exchanger family XC_RS18875 PF03795 YCII-related domain XC_RS18880 PF02469 Fasciclin domain XC_RS18885 PF03167 Uracil DNA glycosylase superfamily XC_RS18895 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XC_RS18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS18900 PF03466 LysR substrate binding domain XC_RS18905 PF03358 NADPH-dependent FMN reductase XC_RS18910 PF00248 Aldo/keto reductase family XC_RS18920 PF05649 Peptidase family M13 XC_RS18920 PF01431 Peptidase family M13 XC_RS18935 PF13520 Amino acid permease XC_RS18945 PF00072 Response regulator receiver domain XC_RS18945 PF04397 LytTr DNA-binding domain XC_RS18950 PF02743 Cache domain XC_RS18950 PF00672 HAMP domain XC_RS18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS18950 PF06580 Histidine kinase XC_RS18965 PF00857 Isochorismatase family XC_RS18970 PF05974 Domain of unknown function (DUF892) XC_RS18975 PF05974 Domain of unknown function (DUF892) XC_RS18980 PF05067 Manganese containing catalase XC_RS18995 PF01739 CheR methyltransferase, SAM binding domain XC_RS18995 PF03705 CheR methyltransferase, all-alpha domain XC_RS18995 PF08448 PAS fold XC_RS18995 PF01339 CheB methylesterase XC_RS19010 PF00158 Sigma-54 interaction domain XC_RS19010 PF02954 Bacterial regulatory protein, Fis family XC_RS19010 PF00072 Response regulator receiver domain XC_RS19020 PF01654 Cytochrome bd terminal oxidase subunit I XC_RS19025 PF02322 Cytochrome bd terminal oxidase subunit II XC_RS19045 PF16363 GDP-mannose 4,6 dehydratase XC_RS19055 PF03275 UDP-galactopyranose mutase XC_RS19065 PF00005 ABC transporter XC_RS19065 PF00664 ABC transporter transmembrane region XC_RS19080 PF13823 Alcohol dehydrogenase GroES-associated XC_RS19080 PF00107 Zinc-binding dehydrogenase XC_RS19080 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS19105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XC_RS19105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_RS19130 PF07715 TonB-dependent Receptor Plug Domain XC_RS19130 PF00593 TonB dependent receptor XC_RS19145 PF00005 ABC transporter XC_RS19155 PF03466 LysR substrate binding domain XC_RS19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS19160 PF01042 Endoribonuclease L-PSP XC_RS19180 PF00248 Aldo/keto reductase family XC_RS19185 PF03466 LysR substrate binding domain XC_RS19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS19205 PF00360 Phytochrome region XC_RS19205 PF00990 Diguanylate cyclase, GGDEF domain XC_RS19205 PF01590 GAF domain XC_RS19205 PF00563 EAL domain XC_RS19220 PF01527 Transposase XC_RS19225 PF00665 Integrase core domain XC_RS19225 PF13276 HTH-like domain XC_RS19225 PF13333 Integrase core domain XC_RS19240 PF04542 Sigma-70 region 2 XC_RS19240 PF04545 Sigma-70, region 4 XC_RS19240 PF00140 Sigma-70 factor, region 1.2 XC_RS19240 PF03979 Sigma-70 factor, region 1.1 XC_RS19240 PF04539 Sigma-70 region 3 XC_RS19240 PF04546 Sigma-70, non-essential region XC_RS19245 PF02580 D-Tyr-tRNA(Tyr) deacylase XC_RS19250 PF03279 Bacterial lipid A biosynthesis acyltransferase XC_RS19260 PF00925 GTP cyclohydrolase II XC_RS19280 PF00535 Glycosyl transferase family 2 XC_RS19295 PF01029 NusB family XC_RS19295 PF01189 16S rRNA methyltransferase RsmB/F XC_RS19300 PF00551 Formyl transferase XC_RS19300 PF02911 Formyl transferase, C-terminal domain XC_RS19305 PF01327 Polypeptide deformylase XC_RS19310 PF01476 LysM domain XC_RS19315 PF17782 DprA winged helix domain XC_RS19315 PF02481 DNA recombination-mediator protein A XC_RS19320 PF04361 Protein of unknown function (DUF494) XC_RS19325 PF07963 Prokaryotic N-terminal methylation motif XC_RS19325 PF00114 Pilin (bacterial filament) XC_RS19335 PF01131 DNA topoisomerase XC_RS19335 PF01751 Toprim domain XC_RS19335 PF13368 Topoisomerase C-terminal repeat XC_RS19340 PF01300 Telomere recombination XC_RS19355 PF01590 GAF domain XC_RS19355 PF00990 Diguanylate cyclase, GGDEF domain XC_RS19355 PF00360 Phytochrome region XC_RS19355 PF00563 EAL domain XC_RS19370 PF01343 Peptidase family S49 XC_RS19375 PF01554 MatE XC_RS19390 PF00270 DEAD/DEAH box helicase XC_RS19390 PF00271 Helicase conserved C-terminal domain XC_RS19390 PF17764 3′ DNA-binding domain (3′BD) XC_RS19390 PF18074 Primosomal protein N C-terminal domain XC_RS19390 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XC_RS19395 PF00043 Glutathione S-transferase, C-terminal domain XC_RS19395 PF13417 Glutathione S-transferase, N-terminal domain XC_RS19410 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS19415 PF03458 UPF0126 domain XC_RS19420 PF04545 Sigma-70, region 4 XC_RS19420 PF04542 Sigma-70 region 2 XC_RS19425 PF03167 Uracil DNA glycosylase superfamily XC_RS19430 PF00072 Response regulator receiver domain XC_RS19430 PF01339 CheB methylesterase XC_RS19435 PF18075 FtsX extracellular domain XC_RS19440 PF00005 ABC transporter XC_RS19445 PF00270 DEAD/DEAH box helicase XC_RS19445 PF00271 Helicase conserved C-terminal domain XC_RS19445 PF12300 ATP-dependent RNA helicase RhlB XC_RS19450 PF00085 Thioredoxin XC_RS19455 PF07497 Rho termination factor, RNA-binding domain XC_RS19455 PF07498 Rho termination factor, N-terminal domain XC_RS19455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XC_RS19465 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XC_RS19470 PF03466 LysR substrate binding domain XC_RS19470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS19480 PF03971 Monomeric isocitrate dehydrogenase XC_RS19490 PF01476 LysM domain XC_RS19490 PF00756 Putative esterase XC_RS19495 PF14489 QueF-like protein XC_RS19495 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XC_RS19500 PF07687 Peptidase dimerisation domain XC_RS19500 PF01546 Peptidase family M20/M25/M40 XC_RS19505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS19510 PF00873 AcrB/AcrD/AcrF family XC_RS19515 PF00873 AcrB/AcrD/AcrF family XC_RS19535 PF08281 Sigma-70, region 4 XC_RS19535 PF04542 Sigma-70 region 2 XC_RS19540 PF07063 Domain of unknown function (DUF1338) XC_RS19580 PF01427 D-ala-D-ala dipeptidase XC_RS19585 PF01471 Putative peptidoglycan binding domain XC_RS19585 PF04717 Type VI secretion system, phage-baseplate injector XC_RS19600 PF01510 N-acetylmuramoyl-L-alanine amidase XC_RS19610 PF13378 Enolase C-terminal domain-like XC_RS19610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XC_RS19620 PF13520 Amino acid permease XC_RS19635 PF05360 yiaA/B two helix domain XC_RS19640 PF07995 Glucose / Sorbosone dehydrogenase XC_RS19645 PF14310 Fibronectin type III-like domain XC_RS19645 PF01915 Glycosyl hydrolase family 3 C-terminal domain XC_RS19645 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS19650 PF02152 Dihydroneopterin aldolase XC_RS19655 PF00814 Glycoprotease family XC_RS19660 PF01165 Ribosomal protein S21 XC_RS19665 PF09424 Yqey-like protein XC_RS19670 PF03631 Virulence factor BrkB XC_RS19675 PF08278 DNA primase DnaG DnaB-binding XC_RS19675 PF10410 DnaB-helicase binding domain of primase XC_RS19675 PF01807 CHC2 zinc finger XC_RS19675 PF08275 DNA primase catalytic core, N-terminal domain XC_RS19685 PF13593 SBF-like CPA transporter family (DUF4137) XC_RS19690 PF11412 Disulphide bond corrector protein DsbC XC_RS19690 PF02683 Cytochrome C biogenesis protein transmembrane region XC_RS19695 PF01040 UbiA prenyltransferase family XC_RS19720 PF00510 Cytochrome c oxidase subunit III XC_RS19725 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 XC_RS19735 PF00115 Cytochrome C and Quinol oxidase polypeptide I XC_RS19740 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XC_RS19740 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XC_RS19750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XC_RS19750 PF14850 DNA-binding domain of Proline dehydrogenase XC_RS19750 PF01619 Proline dehydrogenase XC_RS19750 PF00171 Aldehyde dehydrogenase family XC_RS19755 PF05598 Transposase domain (DUF772) XC_RS19785 PF13276 HTH-like domain XC_RS19785 PF13683 Integrase core domain XC_RS19790 PF01527 Transposase XC_RS19800 PF13276 HTH-like domain XC_RS19800 PF13683 Integrase core domain XC_RS19805 PF01527 Transposase XC_RS19815 PF00665 Integrase core domain XC_RS19815 PF13276 HTH-like domain XC_RS19815 PF13333 Integrase core domain XC_RS19820 PF01527 Transposase XC_RS19830 PF05598 Transposase domain (DUF772) XC_RS19830 PF01609 Transposase DDE domain XC_RS19835 PF05598 Transposase domain (DUF772) XC_RS19865 PF00579 tRNA synthetases class I (W and Y) XC_RS19870 PF04225 Opacity-associated protein A LysM-like domain XC_RS19870 PF01551 Peptidase family M23 XC_RS19875 PF03702 Anhydro-N-acetylmuramic acid kinase XC_RS19885 PF07690 Major Facilitator Superfamily XC_RS19890 PF03372 Endonuclease/Exonuclease/phosphatase family XC_RS19895 PF00156 Phosphoribosyl transferase domain XC_RS19905 PF13614 AAA domain XC_RS19910 PF17762 HTH domain found in ParB protein XC_RS19910 PF02195 ParB-like nuclease domain XC_RS19925 PF01370 NAD dependent epimerase/dehydratase family XC_RS19930 PF00535 Glycosyl transferase family 2 XC_RS19945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XC_RS19945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XC_RS19945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XC_RS19945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XC_RS19950 PF00692 dUTPase XC_RS19955 PF04127 DNA / pantothenate metabolism flavoprotein XC_RS19955 PF02441 Flavoprotein XC_RS19960 PF04002 RadC-like JAB domain XC_RS19965 PF05746 DALR anticodon binding domain XC_RS19965 PF00750 tRNA synthetases class I (R) XC_RS19965 PF03485 Arginyl tRNA synthetase N terminal domain XC_RS19980 PF00106 short chain dehydrogenase XC_RS19985 PF01757 Acyltransferase family XC_RS19995 PF03033 Glycosyltransferase family 28 N-terminal domain XC_RS20000 PF13193 AMP-binding enzyme C-terminal domain XC_RS20000 PF00501 AMP-binding enzyme XC_RS20000 PF00668 Condensation domain XC_RS20000 PF00550 Phosphopantetheine attachment site XC_RS20000 PF00975 Thioesterase domain XC_RS20005 PF17944 Arginine decarboxylase C-terminal helical extension XC_RS20005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XC_RS20005 PF17810 Arginine decarboxylase helical bundle domain XC_RS20010 PF17284 Spermidine synthase tetramerisation domain XC_RS20025 PF00543 Nitrogen regulatory protein P-II XC_RS20030 PF04380 Membrane fusogenic activity XC_RS20035 PF13335 Magnesium chelatase, subunit ChlI C-terminal XC_RS20035 PF01078 Magnesium chelatase, subunit ChlI XC_RS20050 PF12792 CSS motif domain associated with EAL XC_RS20050 PF00563 EAL domain XC_RS20055 PF00487 Fatty acid desaturase XC_RS20060 PF00111 2Fe-2S iron-sulfur cluster binding domain XC_RS20060 PF00175 Oxidoreductase NAD-binding domain XC_RS20060 PF00970 Oxidoreductase FAD-binding domain XC_RS20065 PF00440 Bacterial regulatory proteins, tetR family XC_RS20085 PF01139 tRNA-splicing ligase RtcB XC_RS20125 PF08338 Domain of unknown function (DUF1731) XC_RS20125 PF01370 NAD dependent epimerase/dehydratase family XC_RS20130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XC_RS20130 PF07992 Pyridine nucleotide-disulphide oxidoreductase XC_RS20140 PF00072 Response regulator receiver domain XC_RS20140 PF00486 Transcriptional regulatory protein, C terminal XC_RS20145 PF00512 His Kinase A (phospho-acceptor) domain XC_RS20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS20145 PF08521 Two-component sensor kinase N-terminal XC_RS20165 PF00595 PDZ domain XC_RS20185 PF01594 AI-2E family transporter XC_RS20190 PF13419 Haloacid dehalogenase-like hydrolase XC_RS20195 PF00883 Cytosol aminopeptidase family, catalytic domain XC_RS20195 PF02789 Cytosol aminopeptidase family, N-terminal domain XC_RS20220 PF00196 Bacterial regulatory proteins, luxR family XC_RS20220 PF00072 Response regulator receiver domain XC_RS20225 PF07730 Histidine kinase XC_RS20230 PF13533 Biotin-lipoyl like XC_RS20235 PF00005 ABC transporter XC_RS20255 PF00892 EamA-like transporter family XC_RS20260 PF00892 EamA-like transporter family XC_RS20285 PF00753 Metallo-beta-lactamase superfamily XC_RS20290 PF00579 tRNA synthetases class I (W and Y) XC_RS20295 PF05532 CsbD-like XC_RS20310 PF00491 Arginase family XC_RS20335 PF02223 Thymidylate kinase XC_RS20340 PF02311 AraC-like ligand binding domain XC_RS20340 PF12833 Helix-turn-helix domain XC_RS20365 PF03309 Type III pantothenate kinase XC_RS20370 PF08279 HTH domain XC_RS20370 PF03099 Biotin/lipoate A/B protein ligase family XC_RS20370 PF02237 Biotin protein ligase C terminal domain XC_RS20380 PF06167 Glucose-regulated metallo-peptidase M90 XC_RS20395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS20400 PF00486 Transcriptional regulatory protein, C terminal XC_RS20400 PF00072 Response regulator receiver domain XC_RS20410 PF01207 Dihydrouridine synthase (Dus) XC_RS20430 PF06628 Catalase-related immune-responsive XC_RS20430 PF00199 Catalase XC_RS20435 PF13307 Helicase C-terminal domain XC_RS20435 PF06733 DEAD_2 XC_RS20450 PF01488 Shikimate / quinate 5-dehydrogenase XC_RS20450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XC_RS20450 PF08501 Shikimate dehydrogenase substrate binding domain XC_RS20460 PF00258 Flavodoxin XC_RS20460 PF00667 FAD binding domain XC_RS20460 PF00175 Oxidoreductase NAD-binding domain XC_RS20465 PF00490 Delta-aminolevulinic acid dehydratase XC_RS20490 PF00326 Prolyl oligopeptidase family XC_RS20490 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XC_RS20495 PF02798 Glutathione S-transferase, N-terminal domain XC_RS20495 PF00043 Glutathione S-transferase, C-terminal domain XC_RS20515 PF04820 Tryptophan halogenase XC_RS20530 PF00005 ABC transporter XC_RS20540 PF01381 Helix-turn-helix XC_RS20550 PF02583 Metal-sensitive transcriptional repressor XC_RS20555 PF01545 Cation efflux family XC_RS20560 PF01229 Glycosyl hydrolases family 39 XC_RS20565 PF00175 Oxidoreductase NAD-binding domain XC_RS20565 PF01383 CpcD/allophycocyanin linker domain XC_RS20570 PF00005 ABC transporter XC_RS20575 PF01061 ABC-2 type transporter XC_RS20585 PF02558 Ketopantoate reductase PanE/ApbA XC_RS20585 PF08546 Ketopantoate reductase PanE/ApbA C terminal XC_RS20595 PF03061 Thioesterase superfamily XC_RS20610 PF00268 Ribonucleotide reductase, small chain XC_RS20615 PF02867 Ribonucleotide reductase, barrel domain XC_RS20615 PF00317 Ribonucleotide reductase, all-alpha domain XC_RS20615 PF03477 ATP cone domain XC_RS20625 PF13380 CoA binding domain XC_RS20625 PF00583 Acetyltransferase (GNAT) family XC_RS20625 PF13607 Succinyl-CoA ligase like flavodoxin domain XC_RS20630 PF03448 MgtE intracellular N domain XC_RS20630 PF00571 CBS domain XC_RS20630 PF01769 Divalent cation transporter XC_RS20635 PF00194 Eukaryotic-type carbonic anhydrase XC_RS20640 PF02254 TrkA-N domain XC_RS20640 PF00999 Sodium/hydrogen exchanger family XC_RS20645 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XC_RS20645 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XC_RS20650 PF00723 Glycosyl hydrolases family 15 XC_RS20655 PF01451 Low molecular weight phosphotyrosine protein phosphatase XC_RS20665 PF05166 YcgL domain XC_RS20670 PF02801 Beta-ketoacyl synthase, C-terminal domain XC_RS20670 PF00109 Beta-ketoacyl synthase, N-terminal domain XC_RS20680 PF00535 Glycosyl transferase family 2 XC_RS20685 PF04820 Tryptophan halogenase XC_RS20725 PF07977 FabA-like domain XC_RS20740 PF00550 Phosphopantetheine attachment site XC_RS20745 PF04820 Tryptophan halogenase XC_RS20775 PF01218 Coproporphyrinogen III oxidase XC_RS20780 PF01612 3'-5' exonuclease XC_RS20780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XC_RS20780 PF01367 5'-3' exonuclease, C-terminal SAM fold XC_RS20780 PF00476 DNA polymerase family A XC_RS20795 PF06812 ImpA, N-terminal, type VI secretion system XC_RS20805 PF12464 Maltose acetyltransferase XC_RS20805 PF14602 Hexapeptide repeat of succinyl-transferase XC_RS20815 PF00580 UvrD/REP helicase N-terminal domain XC_RS20815 PF13361 UvrD-like helicase C-terminal domain XC_RS20825 PF13091 PLD-like domain XC_RS20825 PF13396 Phospholipase_D-nuclease N-terminal XC_RS20830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS20830 PF03466 LysR substrate binding domain XC_RS20835 PF03737 Aldolase/RraA XC_RS20840 PF04303 PrpF protein XC_RS20845 PF04909 Amidohydrolase XC_RS20850 PF00471 Ribosomal protein L33 XC_RS20855 PF00830 Ribosomal L28 family XC_RS20865 PF00873 AcrB/AcrD/AcrF family XC_RS20875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS20875 PF00529 HlyD membrane-fusion protein of T1SS XC_RS20895 PF02527 rRNA small subunit methyltransferase G XC_RS20900 PF09423 PhoD-like phosphatase XC_RS20900 PF16655 PhoD-like phosphatase, N-terminal domain XC_RS20905 PF01648 4'-phosphopantetheinyl transferase superfamily XC_RS20910 PF04226 Transglycosylase associated protein XC_RS20955 PF00480 ROK family XC_RS20965 PF00639 PPIC-type PPIASE domain XC_RS20975 PF00474 Sodium:solute symporter family XC_RS20980 PF04341 Protein of unknown function, DUF485 XC_RS20990 PF16177 Acetyl-coenzyme A synthetase N-terminus XC_RS20990 PF00501 AMP-binding enzyme XC_RS20990 PF13193 AMP-binding enzyme C-terminal domain XC_RS20995 PF00072 Response regulator receiver domain XC_RS20995 PF00196 Bacterial regulatory proteins, luxR family XC_RS21015 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XC_RS21015 PF04616 Glycosyl hydrolases family 43 XC_RS21020 PF00248 Aldo/keto reductase family XC_RS21035 PF01557 Fumarylacetoacetate (FAA) hydrolase family XC_RS21040 PF13378 Enolase C-terminal domain-like XC_RS21040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XC_RS21045 PF05336 L-rhamnose mutarotase XC_RS21050 PF07690 Major Facilitator Superfamily XC_RS21055 PF09339 IclR helix-turn-helix domain XC_RS21055 PF01614 Bacterial transcriptional regulator XC_RS21070 PF02659 Putative manganese efflux pump XC_RS21075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS21075 PF09456 RcsC Alpha-Beta-Loop (ABL) XC_RS21075 PF00512 His Kinase A (phospho-acceptor) domain XC_RS21075 PF00072 Response regulator receiver domain XC_RS21080 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XC_RS21080 PF06165 Glycosyltransferase family 36 XC_RS21095 PF01011 PQQ enzyme repeat XC_RS21095 PF13360 PQQ-like domain XC_RS21095 PF13570 PQQ-like domain XC_RS21115 PF04357 TamB, inner membrane protein subunit of TAM complex XC_RS21120 PF17243 POTRA domain TamA domain 1 XC_RS21120 PF01103 Surface antigen XC_RS21125 PF02092 Glycyl-tRNA synthetase beta subunit XC_RS21125 PF05746 DALR anticodon binding domain XC_RS21130 PF02091 Glycyl-tRNA synthetase alpha subunit XC_RS21135 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XC_RS21135 PF00437 Type II/IV secretion system protein XC_RS21140 PF00117 Glutamine amidotransferase class-I XC_RS21140 PF00958 GMP synthase C terminal domain XC_RS21150 PF00902 Sec-independent protein translocase protein (TatC) XC_RS21155 PF02416 mttA/Hcf106 family XC_RS21160 PF02416 mttA/Hcf106 family XC_RS21170 PF00762 Ferrochelatase XC_RS21175 PF12697 Alpha/beta hydrolase family XC_RS21190 PF04381 Putative exonuclease, RdgC XC_RS21195 PF01171 PP-loop family XC_RS21210 PF00356 Bacterial regulatory proteins, lacI family XC_RS21215 PF07488 Glycosyl hydrolase family 67 middle domain XC_RS21215 PF03648 Glycosyl hydrolase family 67 N-terminus XC_RS21215 PF07477 Glycosyl hydrolase family 67 C-terminus XC_RS21225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XC_RS21225 PF13378 Enolase C-terminal domain-like XC_RS21230 PF04616 Glycosyl hydrolases family 43 XC_RS21230 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XC_RS21235 PF01915 Glycosyl hydrolase family 3 C-terminal domain XC_RS21235 PF07691 PA14 domain XC_RS21235 PF00933 Glycosyl hydrolase family 3 N terminal domain XC_RS21235 PF14310 Fibronectin type III-like domain XC_RS21240 PF01232 Mannitol dehydrogenase Rossmann domain XC_RS21240 PF08125 Mannitol dehydrogenase C-terminal domain XC_RS21280 PF08450 SMP-30/Gluconolactonase/LRE-like region XC_RS21290 PF00331 Glycosyl hydrolase family 10 XC_RS21295 PF00703 Glycosyl hydrolases family 2 XC_RS21295 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XC_RS21295 PF02837 Glycosyl hydrolases family 2, sugar binding domain XC_RS21295 PF16355 Domain of unknown function (DUF4982) XC_RS21295 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XC_RS21300 PF02614 Glucuronate isomerase XC_RS21305 PF00553 Cellulose binding domain XC_RS21305 PF03422 Carbohydrate binding module (family 6) XC_RS21305 PF00331 Glycosyl hydrolase family 10 XC_RS21325 PF04616 Glycosyl hydrolases family 43 XC_RS21350 PF00550 Phosphopantetheine attachment site XC_RS21350 PF00107 Zinc-binding dehydrogenase XC_RS21350 PF16197 Ketoacyl-synthetase C-terminal extension XC_RS21350 PF00109 Beta-ketoacyl synthase, N-terminal domain XC_RS21350 PF02801 Beta-ketoacyl synthase, C-terminal domain XC_RS21350 PF08659 KR domain XC_RS21350 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS21350 PF14765 Polyketide synthase dehydratase XC_RS21350 PF00698 Acyl transferase domain XC_RS21365 PF00356 Bacterial regulatory proteins, lacI family XC_RS21380 PF04820 Tryptophan halogenase XC_RS21385 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XC_RS21390 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XC_RS21395 PF04337 Protein of unknown function, DUF480 XC_RS21405 PF13302 Acetyltransferase (GNAT) domain XC_RS21410 PF00580 UvrD/REP helicase N-terminal domain XC_RS21410 PF13361 UvrD-like helicase C-terminal domain XC_RS21415 PF01527 Transposase XC_RS21420 PF13333 Integrase core domain XC_RS21420 PF13276 HTH-like domain XC_RS21420 PF00665 Integrase core domain XC_RS21425 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XC_RS21430 PF00265 Thymidine kinase XC_RS21435 PF00360 Phytochrome region XC_RS21435 PF08446 PAS fold XC_RS21435 PF00512 His Kinase A (phospho-acceptor) domain XC_RS21435 PF01590 GAF domain XC_RS21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XC_RS21440 PF04349 Periplasmic glucan biosynthesis protein, MdoG XC_RS21450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XC_RS21450 PF06827 Zinc finger found in FPG and IleRS XC_RS21450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XC_RS21480 PF03594 Benzoate membrane transport protein XC_RS21485 PF08446 PAS fold XC_RS21485 PF13426 PAS domain XC_RS21485 PF00360 Phytochrome region XC_RS21485 PF01590 GAF domain XC_RS21490 PF01126 Heme oxygenase XC_RS21495 PF07690 Major Facilitator Superfamily XC_RS21510 PF02810 SEC-C motif XC_RS21520 PF01925 Sulfite exporter TauE/SafE XC_RS21525 PF00593 TonB dependent receptor XC_RS21525 PF07715 TonB-dependent Receptor Plug Domain XC_RS21545 PF01227 GTP cyclohydrolase I XC_RS21555 PF07869 Protein of unknown function (DUF1656) XC_RS21560 PF00529 HlyD membrane-fusion protein of T1SS XC_RS21560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XC_RS21565 PF02321 Outer membrane efflux protein XC_RS21570 PF04632 Fusaric acid resistance protein family XC_RS21575 PF00083 Sugar (and other) transporter XC_RS21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS21585 PF03466 LysR substrate binding domain XC_RS21590 PF00106 short chain dehydrogenase XC_RS21595 PF13396 Phospholipase_D-nuclease N-terminal XC_RS21595 PF13091 PLD-like domain XC_RS21635 PF05598 Transposase domain (DUF772) XC_RS21635 PF01609 Transposase DDE domain XC_RS21670 PF00849 RNA pseudouridylate synthase XC_RS21685 PF13614 AAA domain XC_RS21710 PF01381 Helix-turn-helix XC_RS21715 PF13538 UvrD-like helicase C-terminal domain XC_RS21720 PF00580 UvrD/REP helicase N-terminal domain XC_RS21720 PF12705 PD-(D/E)XK nuclease superfamily XC_RS21720 PF13361 UvrD-like helicase C-terminal domain XC_RS21725 PF17946 RecC C-terminal domain XC_RS21760 PF00005 ABC transporter XC_RS21765 PF02405 Permease MlaE XC_RS21770 PF02470 MlaD protein XC_RS21775 PF05494 MlaC protein XC_RS21785 PF04333 MlaA lipoprotein XC_RS21790 PF00255 Glutathione peroxidase XC_RS21800 PF02646 RmuC family XC_RS21805 PF08240 Alcohol dehydrogenase GroES-like domain XC_RS21805 PF00107 Zinc-binding dehydrogenase XC_RS21810 PF03466 LysR substrate binding domain XC_RS21810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XC_RS21825 PF13520 Amino acid permease XC_RS21835 PF00593 TonB dependent receptor XC_RS21835 PF07715 TonB-dependent Receptor Plug Domain XC_RS21840 PF10947 Protein of unknown function (DUF2628) XC_RS21845 PF00990 Diguanylate cyclase, GGDEF domain XC_RS21850 PF05651 Putative sugar diacid recognition XC_RS21850 PF17853 GGDEF-like domain XC_RS21850 PF13556 PucR C-terminal helix-turn-helix domain XC_RS21855 PF02595 Glycerate kinase family XC_RS21860 PF07690 Major Facilitator Superfamily XC_RS21880 PF10672 S-adenosylmethionine-dependent methyltransferase XC_RS21880 PF17785 PUA-like domain XC_RS21885 PF03741 Integral membrane protein TerC family XC_RS21890 PF01694 Rhomboid family XC_RS21900 PF03009 Glycerophosphoryl diester phosphodiesterase family XC_RS21910 PF01569 PAP2 superfamily XC_RS21915 PF00593 TonB dependent receptor XC_RS21920 PF10396 GTP-binding protein TrmE N-terminus XC_RS21920 PF12631 MnmE helical domain XC_RS21920 PF01926 50S ribosome-binding GTPase XC_RS21925 PF01522 Polysaccharide deacetylase XC_RS21930 PF02096 60Kd inner membrane protein XC_RS21930 PF14849 YidC periplasmic domain XC_RS21935 PF00825 Ribonuclease P XC_RS21940 PF00468 Ribosomal protein L34 XC_RS21970 PF05598 Transposase domain (DUF772) XC_RS21970 PF01609 Transposase DDE domain