XC_RS00005 SM00382 ATPases associated with a variety of cellular activities XC_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain XC_RS00010 SM00480 DNA polymerase III beta subunit XC_RS00020 SM00387 Histidine kinase-like ATPases XC_RS00020 SM00433 TopoisomeraseII XC_RS00035 SM00028 Tetratricopeptide repeats XC_RS00070 SM00155 Phospholipase D. Active site motifs. XC_RS00075 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS00110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_RS00110 SM00245 tail specific protease XC_RS00150 SM00829 Enoylreductase XC_RS00270 SM00487 DEAD-like helicases superfamily XC_RS00270 SM00490 helicase superfamily c-terminal domain XC_RS00365 SM00421 helix_turn_helix, Lux Regulon XC_RS00540 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen XC_RS00565 SM00421 helix_turn_helix, Lux Regulon XC_RS00565 SM00448 cheY-homologous receiver domain XC_RS00590 SM00862 Transcriptional regulatory protein, C terminal XC_RS00700 SM00642 Alpha-amylase domain XC_RS00705 SM00642 Alpha-amylase domain XC_RS00710 SM00642 Alpha-amylase domain XC_RS00790 SM00354 helix_turn _helix lactose operon repressor XC_RS00825 SM00344 helix_turn_helix ASNC type XC_RS00845 SM00382 ATPases associated with a variety of cellular activities XC_RS00860 SM00382 ATPases associated with a variety of cellular activities XC_RS00915 SM00855 Phosphoglycerate mutase family XC_RS00920 SM00867 YceI-like domain XC_RS00925 SM00155 Phospholipase D. Active site motifs. XC_RS00935 SM00563 Phosphate acyltransferases XC_RS00945 SM00028 Tetratricopeptide repeats XC_RS00965 SM01230 XC_RS00965 XC_RS00970 SM00938 Nitrogen regulatory protein P-II XC_RS00980 SM00387 Histidine kinase-like ATPases XC_RS00980 SM00388 His Kinase A (phosphoacceptor) domain XC_RS00985 SM00382 ATPases associated with a variety of cellular activities XC_RS00985 SM00448 cheY-homologous receiver domain XC_RS01055 SM00450 Rhodanese Homology Domain XC_RS01190 SM00563 Phosphate acyltransferases XC_RS01230 SM00342 helix_turn_helix, arabinose operon control protein XC_RS01250 SM00100 Cyclic nucleotide-monophosphate binding domain XC_RS01250 SM00267 diguanylate cyclase XC_RS01275 SM00878 Biotin carboxylase C-terminal domain XC_RS01305 SM00953 XC_RS01305 XC_RS01345 SM00833 Cobalamin synthesis protein cobW C-terminal domain XC_RS01375 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS01410 SM00829 Enoylreductase XC_RS01435 SM00487 DEAD-like helicases superfamily XC_RS01435 SM00490 helicase superfamily c-terminal domain XC_RS01435 SM00847 Helicase associated domain (HA2) Add an annotation XC_RS01440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS01440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS01510 SM00155 Phospholipase D. Active site motifs. XC_RS01615 SM00342 helix_turn_helix, arabinose operon control protein XC_RS01680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS01830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_RS01835 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS01855 SM00342 helix_turn_helix, arabinose operon control protein XC_RS01885 SM00420 helix_turn_helix, Deoxyribose operon repressor XC_RS01885 SM01134 XC_RS01885 XC_RS01900 SM00882 Coenzyme A transferase XC_RS01905 SM00882 Coenzyme A transferase XC_RS01925 SM00998 Adenylosuccinate lyase C-terminus XC_RS01945 SM00346 helix_turn_helix isocitrate lyase regulation XC_RS01950 SM00090 RIO-like kinase XC_RS01965 SM01228 XC_RS01965 XC_RS02020 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS02020 SM00876 Biotin and Thiamin Synthesis associated domain XC_RS02130 SM00267 diguanylate cyclase XC_RS02140 SM00642 Alpha-amylase domain XC_RS02145 SM00642 Alpha-amylase domain XC_RS02155 SM00642 Alpha-amylase domain XC_RS02165 SM00642 Alpha-amylase domain XC_RS02215 SM00822 XC_RS02215 XC_RS02225 SM00487 DEAD-like helicases superfamily XC_RS02225 SM00490 helicase superfamily c-terminal domain XC_RS02240 SM00326 Src homology 3 domains XC_RS02245 SM00861 Transketolase, pyrimidine binding domain XC_RS02275 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS02375 SM00271 DnaJ molecular chaperone homology domain XC_RS02395 SM00046 Diacylglycerol kinase catalytic domain (presumed) XC_RS02415 SM00487 DEAD-like helicases superfamily XC_RS02445 SM00903 Flavin reductase like domain XC_RS02465 SM00100 Cyclic nucleotide-monophosphate binding domain XC_RS02465 SM00419 helix_turn_helix, cAMP Regulatory protein XC_RS02520 SM00073 Histidine Phosphotransfer domain XC_RS02520 SM00387 Histidine kinase-like ATPases XC_RS02520 SM00388 His Kinase A (phosphoacceptor) domain XC_RS02520 SM00448 cheY-homologous receiver domain XC_RS02525 SM00052 Putative diguanylate phosphodiesterase XC_RS02525 SM00267 diguanylate cyclase XC_RS02525 SM00448 cheY-homologous receiver domain XC_RS02570 SM00563 Phosphate acyltransferases XC_RS02590 SM01209 XC_RS02590 XC_RS02590 SM01210 XC_RS02590 XC_RS02595 SM00798 AICARFT/IMPCHase bienzyme XC_RS02595 SM00851 MGS-like domain XC_RS02610 SM00195 Dual specificity phosphatase, catalytic domain XC_RS02630 SM00563 Phosphate acyltransferases XC_RS02655 SM00530 Helix-turn-helix XRE-family like proteins XC_RS02680 SM00878 Biotin carboxylase C-terminal domain XC_RS02715 SM00883 Chaperonin 10 Kd subunit XC_RS02725 SM00487 DEAD-like helicases superfamily XC_RS02725 SM00490 helicase superfamily c-terminal domain XC_RS02825 SM00965 Secretin and TonB N terminus short domain XC_RS02880 SM00867 YceI-like domain XC_RS02925 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XC_RS02935 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_RS02935 SM00895 XC_RS02935 XC_RS02955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS02955 SM00331 Sigma factor PP2C-like phosphatases XC_RS03100 SM00267 diguanylate cyclase XC_RS03150 SM00062 Bacterial periplasmic substrate-binding proteins XC_RS03200 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XC_RS03200 SM01232 XC_RS03200 XC_RS03210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS03220 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS03220 SM00091 PAS domain XC_RS03220 SM00267 diguanylate cyclase XC_RS03225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS03225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS03225 SM01049 XC_RS03225 XC_RS03230 SM00637 XC_RS03230 XC_RS03240 SM00267 diguanylate cyclase XC_RS03275 SM00448 cheY-homologous receiver domain XC_RS03275 SM00850 LytTr DNA-binding domain XC_RS03370 SM00382 ATPases associated with a variety of cellular activities XC_RS03370 SM01086 C-terminal, D2-small domain, of ClpB protein XC_RS03405 SM00267 diguanylate cyclase XC_RS03410 SM01263 XC_RS03410 XC_RS03425 SM00564 beta-propeller repeat XC_RS03445 SM00062 Bacterial periplasmic substrate-binding proteins XC_RS03445 SM00248 ankyrin repeats XC_RS03475 SM00382 ATPases associated with a variety of cellular activities XC_RS03485 SM00268 Actin XC_RS03555 SM00710 Parallel beta-helix repeats XC_RS03570 SM00936 Penicillin-binding protein 5, C-terminal domain XC_RS03595 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS03600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_RS03600 SM00245 tail specific protease XC_RS03655 SM01350 XC_RS03655 XC_RS03665 SM00749 bacterial OsmY and nodulation domain XC_RS03670 SM00387 Histidine kinase-like ATPases XC_RS03670 SM00388 His Kinase A (phosphoacceptor) domain XC_RS03675 SM00448 cheY-homologous receiver domain XC_RS03680 SM00387 Histidine kinase-like ATPases XC_RS03680 SM00388 His Kinase A (phosphoacceptor) domain XC_RS03680 SM00448 cheY-homologous receiver domain XC_RS03705 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XC_RS03730 SM00382 ATPases associated with a variety of cellular activities XC_RS03780 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_RS03780 SM00866 XC_RS03780 XC_RS03790 SM00354 helix_turn _helix lactose operon repressor XC_RS03805 SM00245 tail specific protease XC_RS03875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS03875 SM00387 Histidine kinase-like ATPases XC_RS03875 SM00388 His Kinase A (phosphoacceptor) domain XC_RS03880 SM00448 cheY-homologous receiver domain XC_RS03880 SM00862 Transcriptional regulatory protein, C terminal XC_RS03910 SM00829 Enoylreductase XC_RS03930 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_RS04010 SM00450 Rhodanese Homology Domain XC_RS04045 SM01154 XC_RS04045 XC_RS04055 SM00642 Alpha-amylase domain XC_RS04070 SM00354 helix_turn _helix lactose operon repressor XC_RS04090 SM00448 cheY-homologous receiver domain XC_RS04090 SM00862 Transcriptional regulatory protein, C terminal XC_RS04095 SM00387 Histidine kinase-like ATPases XC_RS04095 SM00388 His Kinase A (phosphoacceptor) domain XC_RS04110 SM00421 helix_turn_helix, Lux Regulon XC_RS04110 SM00448 cheY-homologous receiver domain XC_RS04120 SM00387 Histidine kinase-like ATPases XC_RS04120 SM00388 His Kinase A (phosphoacceptor) domain XC_RS04120 SM00448 cheY-homologous receiver domain XC_RS04135 SM00919 Malic enzyme, NAD binding domain XC_RS04135 SM01274 XC_RS04135 XC_RS04185 SM00267 diguanylate cyclase XC_RS04210 SM01329 XC_RS04210 XC_RS04215 SM00917 LeuA allosteric (dimerisation) domain XC_RS04245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS04265 SM00862 Transcriptional regulatory protein, C terminal XC_RS04270 SM00342 helix_turn_helix, arabinose operon control protein XC_RS04405 SM00464 Found in ATP-dependent protease La (LON) XC_RS04480 SM00028 Tetratricopeptide repeats XC_RS04480 SM00421 helix_turn_helix, Lux Regulon XC_RS04545 SM01011 Aminopeptidase P, N-terminal domain XC_RS04555 SM00849 Metallo-beta-lactamase superfamily XC_RS04580 SM00382 ATPases associated with a variety of cellular activities XC_RS04585 SM00903 Flavin reductase like domain XC_RS04660 SM00861 Transketolase, pyrimidine binding domain XC_RS04675 SM00028 Tetratricopeptide repeats XC_RS04675 SM00327 von Willebrand factor (vWF) type A domain XC_RS04680 SM00327 von Willebrand factor (vWF) type A domain XC_RS04695 SM00382 ATPases associated with a variety of cellular activities XC_RS04700 SM00965 Secretin and TonB N terminus short domain XC_RS04750 SM00487 DEAD-like helicases superfamily XC_RS04750 SM00490 helicase superfamily c-terminal domain XC_RS04760 SM00858 XC_RS04760 XC_RS04770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_RS04785 SM01130 XC_RS04785 XC_RS04795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_RS04795 SM00954 Region found in RelA / SpoT proteins XC_RS04800 SM01409 XC_RS04800 XC_RS04805 SM00072 Guanylate kinase homologues. XC_RS04830 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS04870 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XC_RS04910 SM00506 Appr-1"-p processing enzyme XC_RS04940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS04940 SM00387 Histidine kinase-like ATPases XC_RS05010 SM00967 RNA 2'-O ribose methyltransferase substrate binding XC_RS05040 SM00354 helix_turn _helix lactose operon repressor XC_RS05095 SM00869 Autotransporter beta-domain XC_RS05125 SM00530 Helix-turn-helix XRE-family like proteins XC_RS05205 SM00267 diguanylate cyclase XC_RS05265 SM00528 Domain in histone-like proteins of HNS family XC_RS05270 SM00642 Alpha-amylase domain XC_RS05280 SM00448 cheY-homologous receiver domain XC_RS05280 SM00862 Transcriptional regulatory protein, C terminal XC_RS05285 SM00387 Histidine kinase-like ATPases XC_RS05285 SM00388 His Kinase A (phosphoacceptor) domain XC_RS05340 SM00382 ATPases associated with a variety of cellular activities XC_RS05340 SM00448 cheY-homologous receiver domain XC_RS05345 SM00387 Histidine kinase-like ATPases XC_RS05345 SM00388 His Kinase A (phosphoacceptor) domain XC_RS05355 SM00881 CoA binding domain XC_RS05405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS05405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS05410 SM00564 beta-propeller repeat XC_RS05475 SM00382 ATPases associated with a variety of cellular activities XC_RS05475 SM01086 C-terminal, D2-small domain, of ClpB protein XC_RS05535 SM00855 Phosphoglycerate mutase family XC_RS05545 SM00342 helix_turn_helix, arabinose operon control protein XC_RS05545 SM00871 Bacterial transcription activator, effector binding domain XC_RS05615 SM00382 ATPases associated with a variety of cellular activities XC_RS05660 SM00834 Putative regulatory protein XC_RS05700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XC_RS05710 SM00860 SMI1 / KNR4 family XC_RS05715 SM00382 ATPases associated with a variety of cellular activities XC_RS05780 SM00091 PAS domain XC_RS05780 SM00911 HWE histidine kinase XC_RS05785 SM00448 cheY-homologous receiver domain XC_RS05825 SM00363 S4 RNA-binding domain XC_RS05835 SM00448 cheY-homologous receiver domain XC_RS05845 SM00341 Helicase and RNase D C-terminal XC_RS05845 SM00487 DEAD-like helicases superfamily XC_RS05845 SM00490 helicase superfamily c-terminal domain XC_RS05845 SM00956 XC_RS05845 XC_RS05855 SM00382 ATPases associated with a variety of cellular activities XC_RS05855 SM00487 DEAD-like helicases superfamily XC_RS05855 SM00490 helicase superfamily c-terminal domain XC_RS05855 SM00847 Helicase associated domain (HA2) Add an annotation XC_RS05900 SM00954 Region found in RelA / SpoT proteins XC_RS05925 SM00491 XC_RS05925 XC_RS05950 SM00448 cheY-homologous receiver domain XC_RS05955 SM00448 cheY-homologous receiver domain XC_RS05960 SM00260 Two component signalling adaptor domain XC_RS05965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS05970 SM00073 Histidine Phosphotransfer domain XC_RS05970 SM00260 Two component signalling adaptor domain XC_RS05970 SM00387 Histidine kinase-like ATPases XC_RS05970 SM00448 cheY-homologous receiver domain XC_RS05970 SM01231 XC_RS05970 XC_RS06000 SM00327 von Willebrand factor (vWF) type A domain XC_RS06050 SM00487 DEAD-like helicases superfamily XC_RS06060 SM01040 BRO family, N-terminal domain XC_RS06110 SM01149 XC_RS06110 XC_RS06115 SM00758 XC_RS06115 XC_RS06115 SM01217 XC_RS06115 XC_RS06130 SM00636 XC_RS06130 XC_RS06135 SM00812 Alpha-L-fucosidase XC_RS06180 SM00244 prohibitin homologues XC_RS06260 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_RS06315 SM00867 YceI-like domain XC_RS06325 SM00867 YceI-like domain XC_RS06330 SM00387 Histidine kinase-like ATPases XC_RS06330 SM00388 His Kinase A (phosphoacceptor) domain XC_RS06330 SM00448 cheY-homologous receiver domain XC_RS06335 SM00387 Histidine kinase-like ATPases XC_RS06335 SM00388 His Kinase A (phosphoacceptor) domain XC_RS06335 SM00448 cheY-homologous receiver domain XC_RS06340 SM00387 Histidine kinase-like ATPases XC_RS06340 SM00388 His Kinase A (phosphoacceptor) domain XC_RS06340 SM00448 cheY-homologous receiver domain XC_RS06420 SM00422 helix_turn_helix, mercury resistance XC_RS06450 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XC_RS06495 SM00421 helix_turn_helix, Lux Regulon XC_RS06505 SM00656 XC_RS06505 XC_RS06530 SM00924 MgtE intracellular N domain XC_RS06575 SM00382 ATPases associated with a variety of cellular activities XC_RS06595 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_RS06710 SM00671 Sel1-like repeats. XC_RS06715 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XC_RS06745 SM00382 ATPases associated with a variety of cellular activities XC_RS06760 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XC_RS06790 SM00411 bacterial (prokaryotic) histone like domain XC_RS06805 SM00382 ATPases associated with a variety of cellular activities XC_RS06845 SM00732 Likely ribonuclease with RNase H fold. XC_RS06925 SM00267 diguanylate cyclase XC_RS06930 SM00829 Enoylreductase XC_RS06940 SM01092 CO dehydrogenase flavoprotein C-terminal domain XC_RS06945 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_RS06975 SM00248 ankyrin repeats XC_RS07020 SM00855 Phosphoglycerate mutase family XC_RS07040 SM00155 Phospholipase D. Active site motifs. XC_RS07045 SM00448 cheY-homologous receiver domain XC_RS07050 SM00138 Methyltransferase, chemotaxis proteins XC_RS07055 SM00052 Putative diguanylate phosphodiesterase XC_RS07055 SM00448 cheY-homologous receiver domain XC_RS07060 SM00260 Two component signalling adaptor domain XC_RS07065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS07065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS07070 SM00073 Histidine Phosphotransfer domain XC_RS07070 SM00260 Two component signalling adaptor domain XC_RS07070 SM00387 Histidine kinase-like ATPases XC_RS07070 SM01231 XC_RS07070 XC_RS07080 SM00487 DEAD-like helicases superfamily XC_RS07080 SM00490 helicase superfamily c-terminal domain XC_RS07080 SM00982 XC_RS07080 XC_RS07080 SM01058 CarD-like/TRCF domain XC_RS07095 SM00448 cheY-homologous receiver domain XC_RS07095 SM00862 Transcriptional regulatory protein, C terminal XC_RS07105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS07105 SM00387 Histidine kinase-like ATPases XC_RS07105 SM00388 His Kinase A (phosphoacceptor) domain XC_RS07195 SM00342 helix_turn_helix, arabinose operon control protein XC_RS07250 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XC_RS07250 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XC_RS07275 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS07315 SM00342 helix_turn_helix, arabinose operon control protein XC_RS07315 SM00478 endonuclease III XC_RS07315 SM01009 AlkA N-terminal domain XC_RS07365 SM00487 DEAD-like helicases superfamily XC_RS07365 SM00490 helicase superfamily c-terminal domain XC_RS07370 SM00052 Putative diguanylate phosphodiesterase XC_RS07370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS07370 SM00091 PAS domain XC_RS07370 SM00267 diguanylate cyclase XC_RS07375 SM00363 S4 RNA-binding domain XC_RS07415 SM00382 ATPases associated with a variety of cellular activities XC_RS07440 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XC_RS07530 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS07580 SM00977 TilS substrate C-terminal domain XC_RS07585 SM00098 Alkaline phosphatase homologues XC_RS07620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS07620 SM00387 Histidine kinase-like ATPases XC_RS07620 SM00388 His Kinase A (phosphoacceptor) domain XC_RS07630 SM00382 ATPases associated with a variety of cellular activities XC_RS07630 SM00448 cheY-homologous receiver domain XC_RS07695 SM01160 XC_RS07695 XC_RS07755 SM00369 Leucine-rich repeats, typical (most populated) subfamily XC_RS07760 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS07795 SM00257 Lysin motif XC_RS07835 SM00859 Semialdehyde dehydrogenase, NAD binding domain XC_RS07900 SM00052 Putative diguanylate phosphodiesterase XC_RS07900 SM00267 diguanylate cyclase XC_RS07900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS07920 SM00822 XC_RS07920 XC_RS07965 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XC_RS07970 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XC_RS08020 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS08020 SM00322 K homology RNA-binding domain XC_RS08040 SM01387 XC_RS08040 XC_RS08045 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS08045 SM00322 K homology RNA-binding domain XC_RS08065 SM01001 AIR carboxylase XC_RS08140 SM00487 DEAD-like helicases superfamily XC_RS08140 SM00490 helicase superfamily c-terminal domain XC_RS08200 SM00382 ATPases associated with a variety of cellular activities XC_RS08215 SM00642 Alpha-amylase domain XC_RS08250 SM00642 Alpha-amylase domain XC_RS08255 SM00354 helix_turn _helix lactose operon repressor XC_RS08260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XC_RS08285 SM00873 B3/4 domain XC_RS08285 SM00874 tRNA synthetase B5 domain XC_RS08285 SM00896 Ferredoxin-fold anticodon binding domain XC_RS08290 SM00411 bacterial (prokaryotic) histone like domain XC_RS08295 SM00422 helix_turn_helix, mercury resistance XC_RS08380 SM00849 Metallo-beta-lactamase superfamily XC_RS08405 SM00861 Transketolase, pyrimidine binding domain XC_RS08410 SM00507 HNH nucleases XC_RS08440 SM00465 GIY-YIG type nucleases (URI domain) XC_RS08450 SM00091 PAS domain XC_RS08450 SM00387 Histidine kinase-like ATPases XC_RS08450 SM00388 His Kinase A (phosphoacceptor) domain XC_RS08450 SM00448 cheY-homologous receiver domain XC_RS08475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS08475 SM00091 PAS domain XC_RS08475 SM00387 Histidine kinase-like ATPases XC_RS08475 SM00388 His Kinase A (phosphoacceptor) domain XC_RS08475 SM00448 cheY-homologous receiver domain XC_RS08490 SM00478 endonuclease III XC_RS08495 SM00382 ATPases associated with a variety of cellular activities XC_RS08495 SM00962 SRP54-type protein, GTPase domain XC_RS08495 SM00963 SRP54-type protein, helical bundle domain XC_RS08500 SM00342 helix_turn_helix, arabinose operon control protein XC_RS08525 SM01130 XC_RS08525 XC_RS08620 SM00387 Histidine kinase-like ATPases XC_RS08690 SM00344 helix_turn_helix ASNC type XC_RS08705 SM01323 XC_RS08705 XC_RS08750 SM00354 helix_turn _helix lactose operon repressor XC_RS08775 SM00342 helix_turn_helix, arabinose operon control protein XC_RS08790 SM00448 cheY-homologous receiver domain XC_RS08790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_RS08795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS08795 SM00091 PAS domain XC_RS08795 SM00387 Histidine kinase-like ATPases XC_RS08795 SM00388 His Kinase A (phosphoacceptor) domain XC_RS08795 SM00448 cheY-homologous receiver domain XC_RS08795 SM01079 XC_RS08795 XC_RS08845 SM00267 diguanylate cyclase XC_RS08845 SM00448 cheY-homologous receiver domain XC_RS08855 SM01230 XC_RS08855 XC_RS08865 SM01230 XC_RS08865 XC_RS08895 SM00382 ATPases associated with a variety of cellular activities XC_RS08930 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_RS08930 SM01091 Transporter associated domain XC_RS08955 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS09010 SM00487 DEAD-like helicases superfamily XC_RS09010 SM00490 helicase superfamily c-terminal domain XC_RS09020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS09020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS09025 SM00260 Two component signalling adaptor domain XC_RS09030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS09030 SM00267 diguanylate cyclase XC_RS09055 SM00528 Domain in histone-like proteins of HNS family XC_RS09070 SM00474 3'-5' exonuclease XC_RS09105 SM00646 XC_RS09105 XC_RS09110 SM00853 MutL C terminal dimerisation domain XC_RS09110 SM01340 XC_RS09110 XC_RS09130 SM00822 XC_RS09130 XC_RS09145 SM00052 Putative diguanylate phosphodiesterase XC_RS09145 SM00267 diguanylate cyclase XC_RS09155 SM01322 XC_RS09155 XC_RS09165 SM00357 Cold shock protein domain XC_RS09190 SM00487 DEAD-like helicases superfamily XC_RS09190 SM00490 helicase superfamily c-terminal domain XC_RS09195 SM00382 ATPases associated with a variety of cellular activities XC_RS09230 SM00052 Putative diguanylate phosphodiesterase XC_RS09230 SM00267 diguanylate cyclase XC_RS09230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS09240 SM00841 Elongation factor P, C-terminal XC_RS09240 SM01185 XC_RS09240 XC_RS09285 SM00849 Metallo-beta-lactamase superfamily XC_RS09320 SM01234 XC_RS09320 XC_RS09355 SM00840 XC_RS09355 XC_RS09395 SM00859 Semialdehyde dehydrogenase, NAD binding domain XC_RS09415 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XC_RS09425 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XC_RS09455 SM00382 ATPases associated with a variety of cellular activities XC_RS09460 SM00382 ATPases associated with a variety of cellular activities XC_RS09475 SM00028 Tetratricopeptide repeats XC_RS09515 SM00382 ATPases associated with a variety of cellular activities XC_RS09540 SM00363 S4 RNA-binding domain XC_RS09565 SM00354 helix_turn _helix lactose operon repressor XC_RS09640 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS09645 SM00411 bacterial (prokaryotic) histone like domain XC_RS09655 SM00028 Tetratricopeptide repeats XC_RS09665 SM00822 XC_RS09665 XC_RS09690 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_RS09690 SM01240 XC_RS09690 XC_RS09710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS09715 SM00421 helix_turn_helix, Lux Regulon XC_RS09715 SM00448 cheY-homologous receiver domain XC_RS09720 SM00387 Histidine kinase-like ATPases XC_RS09725 SM00342 helix_turn_helix, arabinose operon control protein XC_RS09765 SM00529 Helix-turn-helix diphteria tox regulatory element XC_RS09775 SM00479 XC_RS09775 XC_RS09845 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS09845 SM00732 Likely ribonuclease with RNase H fold. XC_RS09850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS09850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS09850 SM00091 PAS domain XC_RS09850 SM00387 Histidine kinase-like ATPases XC_RS09850 SM00388 His Kinase A (phosphoacceptor) domain XC_RS09850 SM00448 cheY-homologous receiver domain XC_RS09855 SM00448 cheY-homologous receiver domain XC_RS09940 SM00382 ATPases associated with a variety of cellular activities XC_RS09990 SM00382 ATPases associated with a variety of cellular activities XC_RS10000 SM00849 Metallo-beta-lactamase superfamily XC_RS10015 SM00382 ATPases associated with a variety of cellular activities XC_RS10030 SM00226 Low molecular weight phosphatase family XC_RS10040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XC_RS10040 SM00465 GIY-YIG type nucleases (URI domain) XC_RS10175 SM00953 XC_RS10175 XC_RS10300 SM00487 DEAD-like helicases superfamily XC_RS10385 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XC_RS10385 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XC_RS10385 SM00493 XC_RS10385 XC_RS10460 SM00974 XC_RS10460 XC_RS10515 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS10525 SM00984 UDP binding domain XC_RS10545 SM00450 Rhodanese Homology Domain XC_RS10550 SM00421 helix_turn_helix, Lux Regulon XC_RS10550 SM00448 cheY-homologous receiver domain XC_RS10560 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS10565 SM00363 S4 RNA-binding domain XC_RS10715 SM01068 Putative carbohydrate binding domain XC_RS10720 SM00091 PAS domain XC_RS10720 SM00387 Histidine kinase-like ATPases XC_RS10725 SM00448 cheY-homologous receiver domain XC_RS10755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS10755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS10825 SM00318 Staphylococcal nuclease homologues XC_RS10845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS10845 SM00387 Histidine kinase-like ATPases XC_RS10845 SM00388 His Kinase A (phosphoacceptor) domain XC_RS10875 SM00869 Autotransporter beta-domain XC_RS10880 SM00869 Autotransporter beta-domain XC_RS10885 SM00052 Putative diguanylate phosphodiesterase XC_RS10940 SM00858 XC_RS10940 XC_RS10955 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XC_RS10980 SM00448 cheY-homologous receiver domain XC_RS10980 SM01012 XC_RS10980 XC_RS11000 SM00852 Probable molybdopterin binding domain XC_RS11055 SM00450 Rhodanese Homology Domain XC_RS11060 SM00852 Probable molybdopterin binding domain XC_RS11065 SM00382 ATPases associated with a variety of cellular activities XC_RS11070 SM00564 beta-propeller repeat XC_RS11085 SM00028 Tetratricopeptide repeats XC_RS11095 SM00562 XC_RS11095 XC_RS11120 SM00382 ATPases associated with a variety of cellular activities XC_RS11140 SM00382 ATPases associated with a variety of cellular activities XC_RS11140 SM00843 XC_RS11140 XC_RS11160 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS11165 SM00382 ATPases associated with a variety of cellular activities XC_RS11165 SM01086 C-terminal, D2-small domain, of ClpB protein XC_RS11190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS11205 SM00052 Putative diguanylate phosphodiesterase XC_RS11205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS11205 SM00091 PAS domain XC_RS11205 SM00267 diguanylate cyclase XC_RS11210 SM00091 PAS domain XC_RS11210 SM00387 Histidine kinase-like ATPases XC_RS11215 SM00052 Putative diguanylate phosphodiesterase XC_RS11215 SM00267 diguanylate cyclase XC_RS11215 SM00448 cheY-homologous receiver domain XC_RS11220 SM00387 Histidine kinase-like ATPases XC_RS11235 SM00858 XC_RS11235 XC_RS11240 SM00260 Two component signalling adaptor domain XC_RS11240 SM00448 cheY-homologous receiver domain XC_RS11285 SM00047 Lysozyme subfamily 2 XC_RS11325 SM00421 helix_turn_helix, Lux Regulon XC_RS11325 SM00448 cheY-homologous receiver domain XC_RS11335 SM00448 cheY-homologous receiver domain XC_RS11340 SM00382 ATPases associated with a variety of cellular activities XC_RS11390 SM00382 ATPases associated with a variety of cellular activities XC_RS11445 SM00267 diguanylate cyclase XC_RS11450 SM00267 diguanylate cyclase XC_RS11455 SM00052 Putative diguanylate phosphodiesterase XC_RS11455 SM00267 diguanylate cyclase XC_RS11470 SM00382 ATPases associated with a variety of cellular activities XC_RS11470 SM00962 SRP54-type protein, GTPase domain XC_RS11485 SM00448 cheY-homologous receiver domain XC_RS11495 SM00073 Histidine Phosphotransfer domain XC_RS11495 SM00260 Two component signalling adaptor domain XC_RS11495 SM00387 Histidine kinase-like ATPases XC_RS11495 SM01231 XC_RS11495 XC_RS11550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XC_RS11575 SM00260 Two component signalling adaptor domain XC_RS11585 SM00448 cheY-homologous receiver domain XC_RS11590 SM00073 Histidine Phosphotransfer domain XC_RS11590 SM00260 Two component signalling adaptor domain XC_RS11590 SM00387 Histidine kinase-like ATPases XC_RS11590 SM01231 XC_RS11590 XC_RS11595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS11595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS11610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS11610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS11615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS11615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS11620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS11620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS11630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS11630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS11645 SM00260 Two component signalling adaptor domain XC_RS11655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS11655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XC_RS11660 SM00138 Methyltransferase, chemotaxis proteins XC_RS11670 SM00448 cheY-homologous receiver domain XC_RS11675 SM00052 Putative diguanylate phosphodiesterase XC_RS11675 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS11675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS11675 SM00091 PAS domain XC_RS11675 SM00267 diguanylate cyclase XC_RS11695 SM00966 SpoVT / AbrB like domain XC_RS11720 SM00073 Histidine Phosphotransfer domain XC_RS11720 SM00387 Histidine kinase-like ATPases XC_RS11720 SM00388 His Kinase A (phosphoacceptor) domain XC_RS11720 SM00448 cheY-homologous receiver domain XC_RS11730 SM00448 cheY-homologous receiver domain XC_RS11730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_RS11740 SM00937 XC_RS11740 XC_RS11745 SM00850 LytTr DNA-binding domain XC_RS11785 SM00851 MGS-like domain XC_RS11785 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XC_RS11795 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XC_RS11830 SM00899 XC_RS11830 XC_RS11850 SM00841 Elongation factor P, C-terminal XC_RS11850 SM01185 XC_RS11850 XC_RS11900 SM01007 Class II Aldolase and Adducin N-terminal domain XC_RS11975 SM00100 Cyclic nucleotide-monophosphate binding domain XC_RS11975 SM00419 helix_turn_helix, cAMP Regulatory protein XC_RS12030 SM00912 haemagglutination activity domain XC_RS12085 SM00382 ATPases associated with a variety of cellular activities XC_RS12185 SM00248 ankyrin repeats XC_RS12210 SM00382 ATPases associated with a variety of cellular activities XC_RS12220 SM00479 XC_RS12220 XC_RS12295 SM00014 Acid phosphatase homologues XC_RS12305 SM00387 Histidine kinase-like ATPases XC_RS12310 SM00448 cheY-homologous receiver domain XC_RS12320 SM00052 Putative diguanylate phosphodiesterase XC_RS12320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS12320 SM00267 diguanylate cyclase XC_RS12390 SM00646 XC_RS12390 XC_RS12430 SM00758 XC_RS12430 XC_RS12470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_RS12495 SM01130 XC_RS12495 XC_RS12515 SM00670 Large family of predicted nucleotide-binding domains XC_RS12560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS12560 SM00091 PAS domain XC_RS12560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XC_RS12575 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XC_RS12585 SM00382 ATPases associated with a variety of cellular activities XC_RS12635 SM00382 ATPases associated with a variety of cellular activities XC_RS12645 SM01103 XC_RS12645 XC_RS12655 SM00257 Lysin motif XC_RS12675 SM00463 Small MutS-related domain XC_RS12700 SM01192 XC_RS12700 XC_RS12700 SM01193 XC_RS12700 XC_RS12725 SM00387 Histidine kinase-like ATPases XC_RS12725 SM00433 TopoisomeraseII XC_RS12755 SM01091 Transporter associated domain XC_RS12780 SM00382 ATPases associated with a variety of cellular activities XC_RS12790 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS12920 SM00028 Tetratricopeptide repeats XC_RS12925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS12925 SM00091 PAS domain XC_RS12925 SM00387 Histidine kinase-like ATPases XC_RS12925 SM00388 His Kinase A (phosphoacceptor) domain XC_RS12925 SM00448 cheY-homologous receiver domain XC_RS12930 SM00382 ATPases associated with a variety of cellular activities XC_RS12935 SM00448 cheY-homologous receiver domain XC_RS12940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS12940 SM00091 PAS domain XC_RS12940 SM00387 Histidine kinase-like ATPases XC_RS12940 SM00388 His Kinase A (phosphoacceptor) domain XC_RS12940 SM00448 cheY-homologous receiver domain XC_RS12945 SM00477 DNA/RNA non-specific endonuclease XC_RS12945 SM00892 DNA/RNA non-specific endonuclease XC_RS13055 SM00966 SpoVT / AbrB like domain XC_RS13060 SM00857 Resolvase, N terminal domain XC_RS13230 SM00530 Helix-turn-helix XRE-family like proteins XC_RS13300 SM00830 Chorismate mutase type II XC_RS13320 SM00240 Forkhead associated domain XC_RS13340 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_RS13340 SM00866 XC_RS13340 XC_RS13375 SM00564 beta-propeller repeat XC_RS13380 SM00434 DNA Topoisomerase IV XC_RS13400 SM00292 breast cancer carboxy-terminal domain XC_RS13400 SM00532 Ligase N family XC_RS13410 SM00771 ZipA, C-terminal domain (FtsZ-binding) XC_RS13470 SM00947 Carbonic anhydrase XC_RS13495 SM00479 XC_RS13495 XC_RS13525 SM00981 XC_RS13525 XC_RS13530 SM00382 ATPases associated with a variety of cellular activities XC_RS13555 SM00644 XC_RS13555 XC_RS13565 SM00450 Rhodanese Homology Domain XC_RS13590 SM00478 endonuclease III XC_RS13590 SM00525 XC_RS13590 XC_RS13600 SM00947 Carbonic anhydrase XC_RS13635 SM00382 ATPases associated with a variety of cellular activities XC_RS13650 SM00479 XC_RS13650 XC_RS13655 SM00267 diguanylate cyclase XC_RS13660 SM00967 RNA 2'-O ribose methyltransferase substrate binding XC_RS13670 SM00316 Ribosomal protein S1-like RNA-binding domain XC_RS13670 SM00357 Cold shock protein domain XC_RS13670 SM00955 XC_RS13670 XC_RS13705 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XC_RS13715 SM01018 B12 binding domain XC_RS13735 SM00354 helix_turn _helix lactose operon repressor XC_RS13760 SM00984 UDP binding domain XC_RS13775 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_RS13780 SM00382 ATPases associated with a variety of cellular activities XC_RS13810 SM01091 Transporter associated domain XC_RS13830 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XC_RS13840 SM00861 Transketolase, pyrimidine binding domain XC_RS13865 SM00382 ATPases associated with a variety of cellular activities XC_RS13905 SM00271 DnaJ molecular chaperone homology domain XC_RS14025 SM00487 DEAD-like helicases superfamily XC_RS14025 SM00490 helicase superfamily c-terminal domain XC_RS14065 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS14065 SM00267 diguanylate cyclase XC_RS14075 SM00267 diguanylate cyclase XC_RS14085 SM00822 XC_RS14085 XC_RS14180 SM00357 Cold shock protein domain XC_RS14195 SM00947 Carbonic anhydrase XC_RS14215 SM00382 ATPases associated with a variety of cellular activities XC_RS14235 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS14265 SM00631 XC_RS14265 XC_RS14270 SM01217 XC_RS14270 XC_RS14305 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS14310 SM00342 helix_turn_helix, arabinose operon control protein XC_RS14315 SM00434 DNA Topoisomerase IV XC_RS14340 SM00710 Parallel beta-helix repeats XC_RS14340 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses XC_RS14345 SM01172 XC_RS14345 XC_RS14350 SM00671 Sel1-like repeats. XC_RS14375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_RS14385 SM00972 Spore Coat Protein U domain XC_RS14400 SM00972 Spore Coat Protein U domain XC_RS14455 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_RS14495 SM00481 DNA polymerase alpha chain like domain XC_RS14815 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XC_RS14820 SM00869 Autotransporter beta-domain XC_RS14840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS14840 SM00267 diguanylate cyclase XC_RS14870 SM00487 DEAD-like helicases superfamily XC_RS14870 SM00490 helicase superfamily c-terminal domain XC_RS14885 SM00357 Cold shock protein domain XC_RS14920 SM01118 XC_RS14920 XC_RS14935 SM00448 cheY-homologous receiver domain XC_RS14950 SM00358 Double-stranded RNA binding motif XC_RS14950 SM00535 Ribonuclease III family XC_RS14965 SM00838 Elongation factor G C-terminus XC_RS14970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_RS15020 SM00530 Helix-turn-helix XRE-family like proteins XC_RS15060 SM00812 Alpha-L-fucosidase XC_RS15135 SM00382 ATPases associated with a variety of cellular activities XC_RS15280 SM01126 XC_RS15280 XC_RS15285 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XC_RS15285 SM00534 ATPase domain of DNA mismatch repair MUTS family XC_RS15350 SM00382 ATPases associated with a variety of cellular activities XC_RS15350 SM00962 SRP54-type protein, GTPase domain XC_RS15350 SM00963 SRP54-type protein, helical bundle domain XC_RS15365 SM00813 Alpha-L-arabinofuranosidase C-terminus XC_RS15385 SM00448 cheY-homologous receiver domain XC_RS15390 SM00387 Histidine kinase-like ATPases XC_RS15390 SM00388 His Kinase A (phosphoacceptor) domain XC_RS15395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS15395 SM00387 Histidine kinase-like ATPases XC_RS15395 SM00388 His Kinase A (phosphoacceptor) domain XC_RS15395 SM00448 cheY-homologous receiver domain XC_RS15400 SM00138 Methyltransferase, chemotaxis proteins XC_RS15410 SM00387 Histidine kinase-like ATPases XC_RS15410 SM00388 His Kinase A (phosphoacceptor) domain XC_RS15410 SM00448 cheY-homologous receiver domain XC_RS15445 SM00387 Histidine kinase-like ATPases XC_RS15445 SM00388 His Kinase A (phosphoacceptor) domain XC_RS15445 SM00448 cheY-homologous receiver domain XC_RS15450 SM00387 Histidine kinase-like ATPases XC_RS15450 SM00388 His Kinase A (phosphoacceptor) domain XC_RS15490 SM00342 helix_turn_helix, arabinose operon control protein XC_RS15500 SM00862 Transcriptional regulatory protein, C terminal XC_RS15510 SM00382 ATPases associated with a variety of cellular activities XC_RS15560 SM00904 Riboflavin kinase XC_RS15660 SM00244 prohibitin homologues XC_RS15685 SM00478 endonuclease III XC_RS15710 SM00421 helix_turn_helix, Lux Regulon XC_RS15710 SM00448 cheY-homologous receiver domain XC_RS15745 SM00387 Histidine kinase-like ATPases XC_RS15745 SM00388 His Kinase A (phosphoacceptor) domain XC_RS15750 SM00448 cheY-homologous receiver domain XC_RS15750 SM00862 Transcriptional regulatory protein, C terminal XC_RS15815 SM01060 XC_RS15815 XC_RS15825 SM00091 PAS domain XC_RS15825 SM00342 helix_turn_helix, arabinose operon control protein XC_RS15860 SM00481 DNA polymerase alpha chain like domain XC_RS15890 SM00974 XC_RS15890 XC_RS15905 SM01092 CO dehydrogenase flavoprotein C-terminal domain XC_RS15910 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_RS15915 SM01217 XC_RS15915 XC_RS15930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XC_RS15935 SM00052 Putative diguanylate phosphodiesterase XC_RS15995 SM00855 Phosphoglycerate mutase family XC_RS16025 SM00487 DEAD-like helicases superfamily XC_RS16095 SM00788 Adenylosuccinate synthetase XC_RS16105 SM00244 prohibitin homologues XC_RS16110 SM00244 prohibitin homologues XC_RS16115 SM00448 cheY-homologous receiver domain XC_RS16120 SM00271 DnaJ molecular chaperone homology domain XC_RS16160 SM01321 XC_RS16160 XC_RS16165 SM01359 XC_RS16165 XC_RS16165 SM01360 XC_RS16165 XC_RS16210 SM00382 ATPases associated with a variety of cellular activities XC_RS16225 SM00910 XC_RS16225 XC_RS16260 SM00825 Beta-ketoacyl synthase XC_RS16270 SM00822 XC_RS16270 XC_RS16275 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XC_RS16325 SM00382 ATPases associated with a variety of cellular activities XC_RS16335 SM00460 Transglutaminase/protease-like homologues XC_RS16350 SM00493 XC_RS16350 XC_RS16360 SM00382 ATPases associated with a variety of cellular activities XC_RS16390 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS16395 SM00849 Metallo-beta-lactamase superfamily XC_RS16420 SM00331 Sigma factor PP2C-like phosphatases XC_RS16420 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XC_RS16425 SM00479 XC_RS16425 XC_RS16440 SM00849 Metallo-beta-lactamase superfamily XC_RS16445 SM00257 Lysin motif XC_RS16475 SM00411 bacterial (prokaryotic) histone like domain XC_RS16480 SM00382 ATPases associated with a variety of cellular activities XC_RS16480 SM00464 Found in ATP-dependent protease La (LON) XC_RS16485 SM00382 ATPases associated with a variety of cellular activities XC_RS16485 SM00994 ClpX C4-type zinc finger XC_RS16485 SM01086 C-terminal, D2-small domain, of ClpB protein XC_RS16530 SM01329 XC_RS16530 XC_RS16550 SM00448 cheY-homologous receiver domain XC_RS16550 SM00862 Transcriptional regulatory protein, C terminal XC_RS16555 SM00091 PAS domain XC_RS16555 SM00387 Histidine kinase-like ATPases XC_RS16555 SM00388 His Kinase A (phosphoacceptor) domain XC_RS16575 SM00014 Acid phosphatase homologues XC_RS16630 SM00855 Phosphoglycerate mutase family XC_RS16645 SM00829 Enoylreductase XC_RS16655 SM00382 ATPases associated with a variety of cellular activities XC_RS16685 SM00363 S4 RNA-binding domain XC_RS16700 SM00829 Enoylreductase XC_RS16745 SM00838 Elongation factor G C-terminus XC_RS16780 SM00662 RNA polymerases D XC_RS16785 SM00363 S4 RNA-binding domain XC_RS16785 SM01390 XC_RS16785 XC_RS16845 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XC_RS16850 SM01374 XC_RS16850 XC_RS16870 SM00322 K homology RNA-binding domain XC_RS16885 SM01382 XC_RS16885 XC_RS16885 SM01383 XC_RS16885 XC_RS16905 SM01403 XC_RS16905 XC_RS16915 SM00838 Elongation factor G C-terminus XC_RS16915 SM00889 Elongation factor G, domain IV XC_RS16930 SM00663 RNA polymerase I subunit A N-terminus XC_RS16955 SM00649 Ribosomal protein L11/L12 XC_RS16960 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XC_RS16960 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XC_RS17010 SM01400 XC_RS17010 XC_RS17030 SM00028 Tetratricopeptide repeats XC_RS17040 SM00937 XC_RS17040 XC_RS17045 SM00028 Tetratricopeptide repeats XC_RS17050 SM00852 Probable molybdopterin binding domain XC_RS17180 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XC_RS17180 SM00475 5'-3' exonuclease XC_RS17245 SM00421 helix_turn_helix, Lux Regulon XC_RS17250 SM00387 Histidine kinase-like ATPases XC_RS17250 SM00388 His Kinase A (phosphoacceptor) domain XC_RS17250 SM00448 cheY-homologous receiver domain XC_RS17255 SM00448 cheY-homologous receiver domain XC_RS17275 SM00342 helix_turn_helix, arabinose operon control protein XC_RS17325 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS17360 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_RS17360 SM00895 XC_RS17360 XC_RS17420 SM00650 Ribosomal RNA adenine dimethylases XC_RS17475 SM00387 Histidine kinase-like ATPases XC_RS17475 SM00388 His Kinase A (phosphoacceptor) domain XC_RS17480 SM00448 cheY-homologous receiver domain XC_RS17480 SM00862 Transcriptional regulatory protein, C terminal XC_RS17490 SM00382 ATPases associated with a variety of cellular activities XC_RS17510 SM00382 ATPases associated with a variety of cellular activities XC_RS17620 SM00996 S-adenosyl-L-homocysteine hydrolase XC_RS17620 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XC_RS17645 SM00642 Alpha-amylase domain XC_RS17675 SM00829 Enoylreductase XC_RS17715 SM00957 SecA DEAD-like domain XC_RS17715 SM00958 SecA preprotein cross-linking domain XC_RS17735 SM00864 Tubulin/FtsZ family, GTPase domain XC_RS17735 SM00865 Tubulin/FtsZ family, C-terminal domain XC_RS17740 SM00842 Cell division protein FtsA XC_RS17850 SM00448 cheY-homologous receiver domain XC_RS17850 SM00862 Transcriptional regulatory protein, C terminal XC_RS17855 SM00387 Histidine kinase-like ATPases XC_RS17855 SM00388 His Kinase A (phosphoacceptor) domain XC_RS17880 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XC_RS17940 SM00382 ATPases associated with a variety of cellular activities XC_RS18015 SM00345 helix_turn_helix gluconate operon transcriptional repressor XC_RS18015 SM00866 XC_RS18015 XC_RS18080 SM00382 ATPases associated with a variety of cellular activities XC_RS18105 SM01211 XC_RS18105 XC_RS18165 SM00656 XC_RS18165 XC_RS18170 SM00656 XC_RS18170 XC_RS18200 SM00528 Domain in histone-like proteins of HNS family XC_RS18215 SM00382 ATPases associated with a variety of cellular activities XC_RS18245 SM00882 Coenzyme A transferase XC_RS18250 SM00882 Coenzyme A transferase XC_RS18285 SM00893 Electron transfer flavoprotein domain XC_RS18290 SM00893 Electron transfer flavoprotein domain XC_RS18375 SM00382 ATPases associated with a variety of cellular activities XC_RS18395 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_RS18430 SM00487 DEAD-like helicases superfamily XC_RS18430 SM00490 helicase superfamily c-terminal domain XC_RS18450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS18475 SM00825 Beta-ketoacyl synthase XC_RS18540 SM00382 ATPases associated with a variety of cellular activities XC_RS18560 SM00382 ATPases associated with a variety of cellular activities XC_RS18560 SM00448 cheY-homologous receiver domain XC_RS18580 SM00710 Parallel beta-helix repeats XC_RS18595 SM00830 Chorismate mutase type II XC_RS18605 SM00382 ATPases associated with a variety of cellular activities XC_RS18715 SM00382 ATPases associated with a variety of cellular activities XC_RS18715 SM00930 XC_RS18715 XC_RS18780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XC_RS18780 SM00091 PAS domain XC_RS18780 SM00387 Histidine kinase-like ATPases XC_RS18780 SM00388 His Kinase A (phosphoacceptor) domain XC_RS18780 SM00448 cheY-homologous receiver domain XC_RS18800 SM01005 Alanine racemase, C-terminal domain XC_RS18810 SM00344 helix_turn_helix ASNC type XC_RS18865 SM00382 ATPases associated with a variety of cellular activities XC_RS18880 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. XC_RS18885 SM00986 Uracil DNA glycosylase superfamily XC_RS18885 SM00987 UreE urease accessory protein, C-terminal domain XC_RS18890 SM00729 Elongator protein 3, MiaB family, Radical SAM XC_RS18945 SM00448 cheY-homologous receiver domain XC_RS18945 SM00850 LytTr DNA-binding domain XC_RS18950 SM00387 Histidine kinase-like ATPases XC_RS18995 SM00091 PAS domain XC_RS18995 SM00138 Methyltransferase, chemotaxis proteins XC_RS18995 SM00911 HWE histidine kinase XC_RS19000 SM00448 cheY-homologous receiver domain XC_RS19010 SM00382 ATPases associated with a variety of cellular activities XC_RS19010 SM00448 cheY-homologous receiver domain XC_RS19065 SM00382 ATPases associated with a variety of cellular activities XC_RS19105 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XC_RS19145 SM00382 ATPases associated with a variety of cellular activities XC_RS19150 SM00631 XC_RS19150 XC_RS19165 SM00822 XC_RS19165 XC_RS19205 SM00267 diguanylate cyclase XC_RS19210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS19310 SM00257 Lysin motif XC_RS19335 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XC_RS19335 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XC_RS19335 SM00493 XC_RS19335 XC_RS19355 SM00091 PAS domain XC_RS19355 SM00267 diguanylate cyclase XC_RS19390 SM00487 DEAD-like helicases superfamily XC_RS19390 SM00490 helicase superfamily c-terminal domain XC_RS19425 SM00986 Uracil DNA glycosylase superfamily XC_RS19425 SM00987 UreE urease accessory protein, C-terminal domain XC_RS19430 SM00448 cheY-homologous receiver domain XC_RS19440 SM00382 ATPases associated with a variety of cellular activities XC_RS19445 SM00487 DEAD-like helicases superfamily XC_RS19445 SM00490 helicase superfamily c-terminal domain XC_RS19455 SM00357 Cold shock protein domain XC_RS19455 SM00382 ATPases associated with a variety of cellular activities XC_RS19455 SM00959 Rho termination factor, N-terminal domain XC_RS19490 SM00257 Lysin motif XC_RS19540 SM01150 XC_RS19540 XC_RS19600 SM00644 XC_RS19600 XC_RS19610 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_RS19645 SM01217 XC_RS19645 XC_RS19650 SM00905 Dihydroneopterin aldolase XC_RS19675 SM00400 zinc finger XC_RS19675 SM00493 XC_RS19675 XC_RS19675 SM00766 DNA primase DnaG DnaB-binding XC_RS19865 SM00363 S4 RNA-binding domain XC_RS19910 SM00470 ParB-like nuclease domain XC_RS19935 SM01259 XC_RS19935 XC_RS19965 SM00836 DALR anticodon binding domain XC_RS19965 SM01016 Arginyl tRNA synthetase N terminal dom XC_RS20000 SM00823 Phosphopantetheine attachment site XC_RS20000 SM00824 Thioesterase XC_RS20025 SM00938 Nitrogen regulatory protein P-II XC_RS20035 SM00382 ATPases associated with a variety of cellular activities XC_RS20050 SM00052 Putative diguanylate phosphodiesterase XC_RS20070 SM00986 Uracil DNA glycosylase superfamily XC_RS20070 SM00987 UreE urease accessory protein, C-terminal domain XC_RS20080 SM00244 prohibitin homologues XC_RS20140 SM00448 cheY-homologous receiver domain XC_RS20140 SM00862 Transcriptional regulatory protein, C terminal XC_RS20145 SM00387 Histidine kinase-like ATPases XC_RS20145 SM00388 His Kinase A (phosphoacceptor) domain XC_RS20165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XC_RS20200 SM01060 XC_RS20200 XC_RS20220 SM00421 helix_turn_helix, Lux Regulon XC_RS20220 SM00448 cheY-homologous receiver domain XC_RS20235 SM00382 ATPases associated with a variety of cellular activities XC_RS20285 SM00849 Metallo-beta-lactamase superfamily XC_RS20315 SM00960 Roadblock/LC7 domain XC_RS20340 SM00342 helix_turn_helix, arabinose operon control protein XC_RS20395 SM00387 Histidine kinase-like ATPases XC_RS20395 SM00388 His Kinase A (phosphoacceptor) domain XC_RS20400 SM00448 cheY-homologous receiver domain XC_RS20400 SM00862 Transcriptional regulatory protein, C terminal XC_RS20425 SM00248 ankyrin repeats XC_RS20430 SM01060 XC_RS20430 XC_RS20435 SM00491 XC_RS20435 XC_RS20465 SM01004 Delta-aminolevulinic acid dehydratase XC_RS20510 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XC_RS20530 SM00382 ATPases associated with a variety of cellular activities XC_RS20540 SM00530 Helix-turn-helix XRE-family like proteins XC_RS20570 SM00382 ATPases associated with a variety of cellular activities XC_RS20625 SM00881 CoA binding domain XC_RS20630 SM00116 Domain in cystathionine beta-synthase and other proteins. XC_RS20630 SM00924 MgtE intracellular N domain XC_RS20635 SM01057 Eukaryotic-type carbonic anhydrase XC_RS20655 SM00226 Low molecular weight phosphatase family XC_RS20660 SM00248 ankyrin repeats XC_RS20670 SM00825 Beta-ketoacyl synthase XC_RS20695 SM00822 XC_RS20695 XC_RS20730 SM00563 Phosphate acyltransferases XC_RS20780 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XC_RS20780 SM00474 3'-5' exonuclease XC_RS20780 SM00475 5'-3' exonuclease XC_RS20780 SM00482 DNA polymerase A domain XC_RS20805 SM01266 XC_RS20805 XC_RS20825 SM00155 Phospholipase D. Active site motifs. XC_RS20935 SM00248 ankyrin repeats XC_RS20940 SM00248 ankyrin repeats XC_RS20995 SM00421 helix_turn_helix, Lux Regulon XC_RS20995 SM00448 cheY-homologous receiver domain XC_RS21040 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_RS21055 SM00346 helix_turn_helix isocitrate lyase regulation XC_RS21060 SM00342 helix_turn_helix, arabinose operon control protein XC_RS21075 SM00091 PAS domain XC_RS21075 SM00387 Histidine kinase-like ATPases XC_RS21075 SM00388 His Kinase A (phosphoacceptor) domain XC_RS21075 SM00448 cheY-homologous receiver domain XC_RS21095 SM00564 beta-propeller repeat XC_RS21125 SM00836 DALR anticodon binding domain XC_RS21135 SM00382 ATPases associated with a variety of cellular activities XC_RS21210 SM00354 helix_turn _helix lactose operon repressor XC_RS21225 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XC_RS21235 SM00758 XC_RS21235 XC_RS21235 SM01217 XC_RS21235 XC_RS21275 SM00612 XC_RS21275 XC_RS21290 SM00633 Glycosyl hydrolase family 10 XC_RS21305 SM00633 Glycosyl hydrolase family 10 XC_RS21350 SM00829 Enoylreductase XC_RS21365 SM00354 helix_turn _helix lactose operon repressor XC_RS21385 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XC_RS21435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS21435 SM00388 His Kinase A (phosphoacceptor) domain XC_RS21450 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XC_RS21450 SM01232 XC_RS21450 XC_RS21485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS21485 SM00091 PAS domain XC_RS21550 SM00347 helix_turn_helix multiple antibiotic resistance protein XC_RS21595 SM00155 Phospholipase D. Active site motifs. XC_RS21645 SM00369 Leucine-rich repeats, typical (most populated) subfamily XC_RS21665 SM00530 Helix-turn-helix XRE-family like proteins XC_RS21710 SM00530 Helix-turn-helix XRE-family like proteins XC_RS21730 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XC_RS21730 SM00736 Dystroglycan-type cadherin-like domains. XC_RS21730 SM00869 Autotransporter beta-domain XC_RS21760 SM00382 ATPases associated with a variety of cellular activities XC_RS21805 SM00829 Enoylreductase XC_RS21845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XC_RS21845 SM00091 PAS domain XC_RS21845 SM00267 diguanylate cyclase XC_RS21910 SM00014 Acid phosphatase homologues XC_RS21925 SM00028 Tetratricopeptide repeats