locus-tag class description XCC0001 PF00308 Bacterial dnaA protein XCC0001 PF11638 DnaA N-terminal domain XCC0001 PF08299 Bacterial dnaA protein helix-turn-helix XCC0002 PF00712 DNA polymerase III beta subunit, N-terminal domain XCC0002 PF02768 DNA polymerase III beta subunit, C-terminal domain XCC0002 PF02767 DNA polymerase III beta subunit, central domain XCC0003 PF02463 RecF/RecN/SMC N terminal domain XCC0004 PF01751 Toprim domain XCC0004 PF00204 DNA gyrase B XCC0004 PF00986 DNA gyrase B subunit, carboxyl terminus XCC0004 PF18053 DNA gyrase B subunit insert domain XCC0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0006 PF01435 Peptidase family M48 XCC0008 PF03544 Gram-negative bacterial TonB protein C-terminal XCC0009 PF01618 MotA/TolQ/ExbB proton channel family XCC0010 PF02472 Biopolymer transport protein ExbD/TolR XCC0011 PF02472 Biopolymer transport protein ExbD/TolR XCC0012 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XCC0014 PF13091 PLD-like domain XCC0014 PF13396 Phospholipase_D-nuclease N-terminal XCC0015 PF04055 Radical SAM superfamily XCC0017 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XCC0020 PF01842 ACT domain XCC0020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCC0020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCC0021 PF13180 PDZ domain XCC0021 PF03572 Peptidase family S41 XCC0022 PF01551 Peptidase family M23 XCC0024 PF04389 Peptidase family M28 XCC0026 PF00150 Cellulase (glycosyl hydrolase family 5) XCC0027 PF00150 Cellulase (glycosyl hydrolase family 5) XCC0028 PF00150 Cellulase (glycosyl hydrolase family 5) XCC0029 PF08240 Alcohol dehydrogenase GroES-like domain XCC0029 PF00107 Zinc-binding dehydrogenase XCC0031 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XCC0031 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC0032 PF01645 Conserved region in glutamate synthase XCC0032 PF01493 GXGXG motif XCC0032 PF04898 Glutamate synthase central domain XCC0032 PF00310 Glutamine amidotransferases class-II XCC0035 PF00398 Ribosomal RNA adenine dimethylase XCC0037 PF02678 Pirin XCC0037 PF05726 Pirin C-terminal cupin domain XCC0038 PF02525 Flavodoxin-like fold XCC0039 PF02525 Flavodoxin-like fold XCC0040 PF03466 LysR substrate binding domain XCC0040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0043 PF03466 LysR substrate binding domain XCC0054 PF09369 Domain of unknown function (DUF1998) XCC0054 PF00271 Helicase conserved C-terminal domain XCC0054 PF00270 DEAD/DEAH box helicase XCC0055 PF13784 Fic/DOC family N-terminal XCC0055 PF02661 Fic/DOC family XCC0056 PF03006 Haemolysin-III related XCC0060 PF02525 Flavodoxin-like fold XCC0062 PF01638 HxlR-like helix-turn-helix XCC0063 PF13614 AAA domain XCC0069 PF01872 RibD C-terminal domain XCC0070 PF05532 CsbD-like XCC0071 PF00072 Response regulator receiver domain XCC0071 PF00196 Bacterial regulatory proteins, luxR family XCC0076 PF02868 Thermolysin metallopeptidase, alpha-helical domain XCC0076 PF16485 Protealysin propeptide XCC0076 PF01447 Thermolysin metallopeptidase, catalytic domain XCC0078 PF00293 NUDIX domain XCC0078 PF13344 Haloacid dehalogenase-like hydrolase XCC0079 PF01594 AI-2E family transporter XCC0080 PF07859 alpha/beta hydrolase fold XCC0082 PF00085 Thioredoxin XCC0083 PF00083 Sugar (and other) transporter XCC0083 PF08946 Osmosensory transporter coiled coil XCC0091 PF07726 ATPase family associated with various cellular activities (AAA) XCC0091 PF17863 AAA lid domain XCC0096 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XCC0097 PF00155 Aminotransferase class I and II XCC0098 PF00593 TonB dependent receptor XCC0098 PF07715 TonB-dependent Receptor Plug Domain XCC0101 PF00171 Aldehyde dehydrogenase family XCC0104 PF02735 Ku70/Ku80 beta-barrel domain XCC0105 PF01068 ATP dependent DNA ligase domain XCC0105 PF13298 DNA polymerase Ligase (LigD) XCC0105 PF04679 ATP dependent DNA ligase C terminal region XCC0106 PF01070 FMN-dependent dehydrogenase XCC0107 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family XCC0108 PF07730 Histidine kinase XCC0109 PF00196 Bacterial regulatory proteins, luxR family XCC0109 PF00072 Response regulator receiver domain XCC0114 PF00486 Transcriptional regulatory protein, C terminal XCC0114 PF18500 CadC C-terminal domain 1 XCC0115 PF12241 Trans-2-enoyl-CoA reductase catalytic region XCC0115 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XCC0115 PF07055 Enoyl reductase FAD binding domain XCC0118 PF00294 pfkB family carbohydrate kinase XCC0121 PF01095 Pectinesterase XCC0126 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XCC0127 PF01609 Transposase DDE domain XCC0127 PF05598 Transposase domain (DUF772) XCC0133 PF00128 Alpha amylase, catalytic domain XCC0133 PF11896 Domain of unknown function (DUF3416) XCC0134 PF16657 Maltogenic Amylase, C-terminal domain XCC0134 PF00128 Alpha amylase, catalytic domain XCC0135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCC0135 PF00128 Alpha amylase, catalytic domain XCC0135 PF02806 Alpha amylase, C-terminal all-beta domain XCC0141 PF00248 Aldo/keto reductase family XCC0142 PF13472 GDSL-like Lipase/Acylhydrolase family XCC0143 PF00135 Carboxylesterase family XCC0144 PF13472 GDSL-like Lipase/Acylhydrolase family XCC0144 PF07859 alpha/beta hydrolase fold XCC0146 PF03480 Bacterial extracellular solute-binding protein, family 7 XCC0148 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component XCC0149 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCC0149 PF04616 Glycosyl hydrolases family 43 XCC0150 PF00356 Bacterial regulatory proteins, lacI family XCC0151 PF04962 KduI/IolB family XCC0154 PF00657 GDSL-like Lipase/Acylhydrolase XCC0156 PF00351 Biopterin-dependent aromatic amino acid hydroxylase XCC0157 PF01037 Lrp/AsnC ligand binding domain XCC0158 PF00593 TonB dependent receptor XCC0158 PF07715 TonB-dependent Receptor Plug Domain XCC0158 PF07660 Secretin and TonB N terminus short domain XCC0159 PF01734 Patatin-like phospholipase XCC0161 PF00005 ABC transporter XCC0164 PF00571 CBS domain XCC0164 PF00005 ABC transporter XCC0165 PF00528 Binding-protein-dependent transport system inner membrane component XCC0167 PF03781 Sulfatase-modifying factor enzyme 1 XCC0167 PF12867 DinB superfamily XCC0168 PF10017 Histidine-specific methyltransferase, SAM-dependent XCC0174 PF10609 NUBPL iron-transfer P-loop NTPase XCC0174 PF01883 Iron-sulfur cluster assembly protein XCC0175 PF00300 Histidine phosphatase superfamily (branch 1) XCC0176 PF04264 YceI-like domain XCC0177 PF13091 PLD-like domain XCC0178 PF03061 Thioesterase superfamily XCC0182 PF01161 Phosphatidylethanolamine-binding protein XCC0184 PF02673 Bacitracin resistance protein BacA XCC0185 PF00120 Glutamine synthetase, catalytic domain XCC0185 PF03951 Glutamine synthetase, beta-Grasp domain XCC0186 PF00543 Nitrogen regulatory protein P-II XCC0187 PF00909 Ammonium Transporter Family XCC0188 PF00989 PAS fold XCC0188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0188 PF00512 His Kinase A (phospho-acceptor) domain XCC0189 PF02954 Bacterial regulatory protein, Fis family XCC0189 PF00158 Sigma-54 interaction domain XCC0189 PF00072 Response regulator receiver domain XCC0190 PF00080 Copper/zinc superoxide dismutase (SODC) XCC0191 PF00080 Copper/zinc superoxide dismutase (SODC) XCC0192 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCC0194 PF00108 Thiolase, N-terminal domain XCC0194 PF02803 Thiolase, C-terminal domain XCC0202 PF00581 Rhodanese-like domain XCC0203 PF02556 Preprotein translocase subunit SecB XCC0204 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XCC0204 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XCC0206 PF00205 Thiamine pyrophosphate enzyme, central domain XCC0206 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XCC0206 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XCC0209 PF00588 SpoU rRNA Methylase family XCC0212 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCC0212 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCC0213 PF02661 Fic/DOC family XCC0213 PF13784 Fic/DOC family N-terminal XCC0214 PF01555 DNA methylase XCC0216 PF00561 alpha/beta hydrolase fold XCC0217 PF03692 Putative zinc- or iron-chelating domain XCC0218 PF00501 AMP-binding enzyme XCC0219 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XCC0222 PF07478 D-ala D-ala ligase C-terminus XCC0222 PF01820 D-ala D-ala ligase N-terminus XCC0224 PF03109 ABC1 family XCC0225 PF00849 RNA pseudouridylate synthase XCC0227 PF00472 RF-1 domain XCC0229 PF01112 Asparaginase XCC0230 PF01432 Peptidase family M3 XCC0232 PF12706 Beta-lactamase superfamily domain XCC0235 PF12833 Helix-turn-helix domain XCC0236 PF03466 LysR substrate binding domain XCC0236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0237 PF01274 Malate synthase XCC0238 PF00463 Isocitrate lyase family XCC0239 PF00990 Diguanylate cyclase, GGDEF domain XCC0243 PF00326 Prolyl oligopeptidase family XCC0244 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCC0244 PF18140 Propionyl-coenzyme A carboxylase BT domain XCC0244 PF00289 Biotin carboxylase, N-terminal domain XCC0244 PF02785 Biotin carboxylase C-terminal domain XCC0244 PF00364 Biotin-requiring enzyme XCC0245 PF01039 Carboxyl transferase domain XCC0246 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCC0246 PF02770 Acyl-CoA dehydrogenase, middle domain XCC0246 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCC0254 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XCC0257 PF07683 Cobalamin synthesis protein cobW C-terminal domain XCC0257 PF02492 CobW/HypB/UreG, nucleotide-binding domain XCC0261 PF03969 AFG1-like ATPase XCC0263 PF01047 MarR family XCC0264 PF02566 OsmC-like protein XCC0266 PF07859 alpha/beta hydrolase fold XCC0269 PF00248 Aldo/keto reductase family XCC0270 PF00107 Zinc-binding dehydrogenase XCC0270 PF16884 N-terminal domain of oxidoreductase XCC0271 PF00248 Aldo/keto reductase family XCC0273 PF00849 RNA pseudouridylate synthase XCC0275 PF08482 ATP-dependent helicase C-terminal XCC0275 PF04408 Helicase associated domain (HA2) XCC0275 PF00271 Helicase conserved C-terminal domain XCC0275 PF00270 DEAD/DEAH box helicase XCC0276 PF02203 Tar ligand binding domain homologue XCC0276 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC0276 PF00672 HAMP domain XCC0277 PF07308 Protein of unknown function (DUF1456) XCC0278 PF00576 HIUase/Transthyretin family XCC0279 PF13454 FAD-NAD(P)-binding XCC0283 PF00266 Aminotransferase class-V XCC0284 PF01546 Peptidase family M20/M25/M40 XCC0284 PF07687 Peptidase dimerisation domain XCC0285 PF03466 LysR substrate binding domain XCC0285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0288 PF07690 Major Facilitator Superfamily XCC0289 PF03372 Endonuclease/Exonuclease/phosphatase family XCC0290 PF13091 PLD-like domain XCC0292 PF01425 Amidase XCC0293 PF01156 Inosine-uridine preferring nucleoside hydrolase XCC0295 PF00860 Permease family XCC0296 PF00111 2Fe-2S iron-sulfur cluster binding domain XCC0297 PF00355 Rieske [2Fe-2S] domain XCC0298 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0298 PF03466 LysR substrate binding domain XCC0299 PF01026 TatD related DNase XCC0301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0301 PF03466 LysR substrate binding domain XCC0302 PF07690 Major Facilitator Superfamily XCC0306 PF02146 Sir2 family XCC0307 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCC0308 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XCC0308 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCC0310 PF00551 Formyl transferase XCC0312 PF00106 short chain dehydrogenase XCC0314 PF02219 Methylenetetrahydrofolate reductase XCC0315 PF03466 LysR substrate binding domain XCC0315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0316 PF03358 NADPH-dependent FMN reductase XCC0318 PF08267 Cobalamin-independent synthase, N-terminal domain XCC0318 PF01717 Cobalamin-independent synthase, Catalytic domain XCC0321 PF05368 NmrA-like family XCC0322 PF01638 HxlR-like helix-turn-helix XCC0324 PF00672 HAMP domain XCC0324 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC0324 PF02203 Tar ligand binding domain homologue XCC0336 PF11008 Protein of unknown function (DUF2846) XCC0344 PF00589 Phage integrase family XCC0344 PF13495 Phage integrase, N-terminal SAM-like domain XCC0345 PF00920 Dehydratase family XCC0346 PF03692 Putative zinc- or iron-chelating domain XCC0348 PF00132 Bacterial transferase hexapeptide (six repeats) XCC0349 PF07690 Major Facilitator Superfamily XCC0350 PF01966 HD domain XCC0350 PF11871 Domain of unknown function (DUF3391) XCC0354 PF00171 Aldehyde dehydrogenase family XCC0356 PF01494 FAD binding domain XCC0358 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCC0358 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCC0359 PF00230 Major intrinsic protein XCC0360 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XCC0360 PF01266 FAD dependent oxidoreductase XCC0361 PF00455 DeoR C terminal sensor domain XCC0361 PF08220 DeoR-like helix-turn-helix domain XCC0362 PF00111 2Fe-2S iron-sulfur cluster binding domain XCC0362 PF00970 Oxidoreductase FAD-binding domain XCC0363 PF00355 Rieske [2Fe-2S] domain XCC0364 PF01144 Coenzyme A transferase XCC0365 PF01144 Coenzyme A transferase XCC0366 PF02803 Thiolase, C-terminal domain XCC0366 PF00108 Thiolase, N-terminal domain XCC0367 PF00775 Dioxygenase XCC0367 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XCC0368 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal XCC0368 PF00775 Dioxygenase XCC0369 PF00206 Lyase XCC0369 PF10397 Adenylosuccinate lyase C-terminus XCC0370 PF12146 Serine aminopeptidase, S33 XCC0371 PF02627 Carboxymuconolactone decarboxylase family XCC0373 PF01614 Bacterial transcriptional regulator XCC0373 PF09339 IclR helix-turn-helix domain XCC0375 PF07859 alpha/beta hydrolase fold XCC0376 PF10677 Protein of unknown function (DUF2490) XCC0377 PF13932 GidA associated domain XCC0377 PF01134 Glucose inhibited division protein A XCC0379 PF00291 Pyridoxal-phosphate dependent enzyme XCC0383 PF13649 Methyltransferase domain XCC0385 PF12697 Alpha/beta hydrolase family XCC0387 PF00155 Aminotransferase class I and II XCC0388 PF04055 Radical SAM superfamily XCC0388 PF06968 Biotin and Thiamin Synthesis associated domain XCC0390 PF01040 UbiA prenyltransferase family XCC0392 PF13356 Arm DNA-binding domain XCC0392 PF00589 Phage integrase family XCC0394 PF00593 TonB dependent receptor XCC0394 PF07715 TonB-dependent Receptor Plug Domain XCC0395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XCC0395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XCC0397 PF07715 TonB-dependent Receptor Plug Domain XCC0397 PF00593 TonB dependent receptor XCC0399 PF01527 Transposase XCC0400 PF13683 Integrase core domain XCC0400 PF13276 HTH-like domain XCC0402 PF12794 Mechanosensitive ion channel inner membrane domain 1 XCC0402 PF00924 Mechanosensitive ion channel XCC0402 PF12795 Mechanosensitive ion channel porin domain XCC0403 PF00884 Sulfatase XCC0404 PF03109 ABC1 family XCC0405 PF05661 Protein of unknown function (DUF808) XCC0406 PF02638 Glycosyl hydrolase-like 10 XCC0407 PF00990 Diguanylate cyclase, GGDEF domain XCC0408 PF00534 Glycosyl transferases group 1 XCC0408 PF08323 Starch synthase catalytic domain XCC0409 PF00128 Alpha amylase, catalytic domain XCC0409 PF02806 Alpha amylase, C-terminal all-beta domain XCC0409 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCC0410 PF00128 Alpha amylase, catalytic domain XCC0410 PF11941 Domain of unknown function (DUF3459) XCC0410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCC0411 PF02446 4-alpha-glucanotransferase XCC0412 PF00128 Alpha amylase, catalytic domain XCC0414 PF00128 Alpha amylase, catalytic domain XCC0414 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCC0415 PF13460 NAD(P)H-binding XCC0418 PF06903 VirK protein XCC0419 PF02321 Outer membrane efflux protein XCC0420 PF00440 Bacterial regulatory proteins, tetR family XCC0422 PF00873 AcrB/AcrD/AcrF family XCC0425 PF00270 DEAD/DEAH box helicase XCC0425 PF00271 Helicase conserved C-terminal domain XCC0426 PF05598 Transposase domain (DUF772) XCC0426 PF01609 Transposase DDE domain XCC0427 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCC0427 PF02817 e3 binding domain XCC0427 PF00364 Biotin-requiring enzyme XCC0429 PF02780 Transketolase, C-terminal domain XCC0429 PF02779 Transketolase, pyrimidine binding domain XCC0430 PF00676 Dehydrogenase E1 component XCC0432 PF03301 Tryptophan 2,3-dioxygenase XCC0433 PF00854 POT family XCC0435 PF01047 MarR family XCC0436 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCC0437 PF04480 Protein of unknown function (DUF559) XCC0438 PF04209 homogentisate 1,2-dioxygenase XCC0441 PF03334 Na+/H+ antiporter subunit XCC0442 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) XCC0444 PF00361 Proton-conducting membrane transporter XCC0445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XCC0446 PF13244 Domain of unknown function (DUF4040) XCC0446 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter XCC0446 PF00361 Proton-conducting membrane transporter XCC0446 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCC0453 PF01259 SAICAR synthetase XCC0454 PF01556 DnaJ C terminal domain XCC0454 PF00226 DnaJ domain XCC0454 PF00684 DnaJ central domain XCC0455 PF00834 Ribulose-phosphate 3 epimerase family XCC0458 PF00781 Diacylglycerol kinase catalytic domain XCC0459 PF04715 Anthranilate synthase component I, N terminal region XCC0459 PF00425 chorismate binding enzyme XCC0460 PF00155 Aminotransferase class I and II XCC0462 PF18766 SWI2/SNF2 ATPase XCC0462 PF12008 Type I restriction and modification enzyme - subunit R C terminal XCC0462 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XCC0466 PF02384 N-6 DNA Methylase XCC0466 PF12161 HsdM N-terminal domain XCC0467 PF00117 Glutamine amidotransferase class-I XCC0468 PF01613 Flavin reductase like domain XCC0469 PF00591 Glycosyl transferase family, a/b domain XCC0469 PF02885 Glycosyl transferase family, helical bundle domain XCC0470 PF00218 Indole-3-glycerol phosphate synthase XCC0472 PF00325 Bacterial regulatory proteins, crp family XCC0472 PF00027 Cyclic nucleotide-binding domain XCC0473 PF02675 S-adenosylmethionine decarboxylase XCC0474 PF00893 Small Multidrug Resistance protein XCC0475 PF03232 Ubiquinone biosynthesis protein COQ7 XCC0476 PF00572 Ribosomal protein L13 XCC0477 PF00380 Ribosomal protein S9/S16 XCC0480 PF00293 NUDIX domain XCC0482 PF00210 Ferritin-like domain XCC0483 PF01627 Hpt domain XCC0483 PF00672 HAMP domain XCC0483 PF00512 His Kinase A (phospho-acceptor) domain XCC0483 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCC0483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0483 PF00072 Response regulator receiver domain XCC0484 PF00072 Response regulator receiver domain XCC0484 PF00486 Transcriptional regulatory protein, C terminal XCC0488 PF01521 Iron-sulphur cluster biosynthesis XCC0489 PF09297 NADH pyrophosphatase zinc ribbon domain XCC0489 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XCC0489 PF00293 NUDIX domain XCC0490 PF17113 Regulatory signalling modulator protein AmpE XCC0490 PF03186 CobD/Cbib protein XCC0494 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0494 PF03466 LysR substrate binding domain XCC0495 PF07690 Major Facilitator Superfamily XCC0496 PF12805 FUSC-like inner membrane protein yccS XCC0497 PF02843 Phosphoribosylglycinamide synthetase, C domain XCC0497 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XCC0497 PF02844 Phosphoribosylglycinamide synthetase, N domain XCC0498 PF02142 MGS-like domain XCC0498 PF01808 AICARFT/IMPCHase bienzyme XCC0499 PF01066 CDP-alcohol phosphatidyltransferase XCC0500 PF12147 Putative methyltransferase XCC0500 PF12146 Serine aminopeptidase, S33 XCC0501 PF00782 Dual specificity phosphatase, catalytic domain XCC0507 PF00818 Ice nucleation protein repeat XCC0507 PF00818 Ice nucleation protein repeat XCC0508 PF02954 Bacterial regulatory protein, Fis family XCC0510 PF01381 Helix-turn-helix XCC0515 PF02785 Biotin carboxylase C-terminal domain XCC0515 PF00289 Biotin carboxylase, N-terminal domain XCC0515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCC0517 PF00364 Biotin-requiring enzyme XCC0518 PF01220 Dehydroquinase class II XCC0519 PF11412 Disulphide bond corrector protein DsbC XCC0519 PF02683 Cytochrome C biogenesis protein transmembrane region XCC0520 PF03091 CutA1 divalent ion tolerance protein XCC0521 PF04231 Endonuclease I XCC0522 PF00166 Chaperonin 10 Kd subunit XCC0523 PF00118 TCP-1/cpn60 chaperonin family XCC0524 PF00271 Helicase conserved C-terminal domain XCC0524 PF00176 SNF2 family N-terminal domain XCC0525 PF00270 DEAD/DEAH box helicase XCC0525 PF17191 RecG wedge domain XCC0525 PF13749 Putative ATP-dependent DNA helicase recG C-terminal XCC0527 PF01738 Dienelactone hydrolase family XCC0531 PF00593 TonB dependent receptor XCC0531 PF07715 TonB-dependent Receptor Plug Domain XCC0533 PF01527 Transposase XCC0534 PF13683 Integrase core domain XCC0534 PF13276 HTH-like domain XCC0535 PF05598 Transposase domain (DUF772) XCC0542 PF00364 Biotin-requiring enzyme XCC0542 PF02817 e3 binding domain XCC0542 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCC0544 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCC0544 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC0545 PF01979 Amidohydrolase family XCC0548 PF00119 ATP synthase A chain XCC0549 PF00137 ATP synthase subunit C XCC0550 PF00430 ATP synthase B/B' CF(0) XCC0551 PF00213 ATP synthase delta (OSCP) subunit XCC0552 PF00306 ATP synthase alpha/beta chain, C terminal domain XCC0552 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCC0552 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCC0553 PF00231 ATP synthase XCC0554 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCC0554 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCC0555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XCC0555 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XCC0558 PF12804 MobA-like NTP transferase domain XCC0558 PF00132 Bacterial transferase hexapeptide (six repeats) XCC0558 PF14602 Hexapeptide repeat of succinyl-transferase XCC0560 PF13276 HTH-like domain XCC0560 PF13683 Integrase core domain XCC0561 PF01527 Transposase XCC0562 PF00512 His Kinase A (phospho-acceptor) domain XCC0562 PF00672 HAMP domain XCC0562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0563 PF00158 Sigma-54 interaction domain XCC0563 PF00072 Response regulator receiver domain XCC0563 PF02954 Bacterial regulatory protein, Fis family XCC0565 PF02687 FtsX-like permease family XCC0565 PF12704 MacB-like periplasmic core domain XCC0565 PF00005 ABC transporter XCC0566 PF00005 ABC transporter XCC0566 PF02687 FtsX-like permease family XCC0566 PF12704 MacB-like periplasmic core domain XCC0567 PF00005 ABC transporter XCC0568 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC0569 PF01380 SIS domain XCC0570 PF05598 Transposase domain (DUF772) XCC0575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCC0576 PF05275 Copper resistance protein B precursor (CopB) XCC0577 PF00394 Multicopper oxidase XCC0577 PF07732 Multicopper oxidase XCC0577 PF07731 Multicopper oxidase XCC0578 PF00291 Pyridoxal-phosphate dependent enzyme XCC0580 PF01432 Peptidase family M3 XCC0581 PF00109 Beta-ketoacyl synthase, N-terminal domain XCC0581 PF02801 Beta-ketoacyl synthase, C-terminal domain XCC0582 PF07977 FabA-like domain XCC0583 PF11798 IMS family HHH motif XCC0583 PF00817 impB/mucB/samB family XCC0583 PF11799 impB/mucB/samB family C-terminal domain XCC0584 PF13419 Haloacid dehalogenase-like hydrolase XCC0586 PF13185 GAF domain XCC0589 PF01242 6-pyruvoyl tetrahydropterin synthase XCC0590 PF00271 Helicase conserved C-terminal domain XCC0590 PF00270 DEAD/DEAH box helicase XCC0592 PF14497 Glutathione S-transferase, C-terminal domain XCC0592 PF02798 Glutathione S-transferase, N-terminal domain XCC0593 PF00437 Type II/IV secretion system protein XCC0597 PF00291 Pyridoxal-phosphate dependent enzyme XCC0597 PF00571 CBS domain XCC0598 PF01053 Cys/Met metabolism PLP-dependent enzyme XCC0601 PF00005 ABC transporter XCC0602 PF00069 Protein kinase domain XCC0602 PF13847 Methyltransferase domain XCC0603 PF00534 Glycosyl transferases group 1 XCC0603 PF13439 Glycosyltransferase Family 4 XCC0606 PF16363 GDP-mannose 4,6 dehydratase XCC0608 PF16363 GDP-mannose 4,6 dehydratase XCC0609 PF05598 Transposase domain (DUF772) XCC0609 PF01609 Transposase DDE domain XCC0610 PF13683 Integrase core domain XCC0610 PF13276 HTH-like domain XCC0611 PF01527 Transposase XCC0612 PF01527 Transposase XCC0616 PF00535 Glycosyl transferase family 2 XCC0617 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCC0618 PF00483 Nucleotidyl transferase XCC0618 PF01050 Mannose-6-phosphate isomerase XCC0619 PF00766 Electron transfer flavoprotein FAD-binding domain XCC0619 PF01012 Electron transfer flavoprotein domain XCC0620 PF01012 Electron transfer flavoprotein domain XCC0621 PF16363 GDP-mannose 4,6 dehydratase XCC0622 PF00483 Nucleotidyl transferase XCC0623 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XCC0624 PF04321 RmlD substrate binding domain XCC0625 PF01050 Mannose-6-phosphate isomerase XCC0625 PF00483 Nucleotidyl transferase XCC0626 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCC0626 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCC0626 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCC0626 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCC0627 PF01144 Coenzyme A transferase XCC0628 PF01144 Coenzyme A transferase XCC0629 PF05045 Rhamnan synthesis protein F XCC0629 PF14307 Glycosyltransferase WbsX XCC0633 PF03886 ABC-type transport auxiliary lipoprotein component XCC0633 PF02470 MlaD protein XCC0634 PF00005 ABC transporter XCC0635 PF02405 Permease MlaE XCC0637 PF00816 H-NS histone family XCC0638 PF05598 Transposase domain (DUF772) XCC0639 PF03129 Anticodon binding domain XCC0639 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCC0639 PF04073 Aminoacyl-tRNA editing domain XCC0641 PF01066 CDP-alcohol phosphatidyltransferase XCC0644 PF00544 Pectate lyase XCC0645 PF00544 Pectate lyase XCC0646 PF08264 Anticodon-binding domain of tRNA XCC0646 PF10458 Valyl tRNA synthetase tRNA binding arm XCC0646 PF00133 tRNA synthetases class I (I, L, M and V) XCC0649 PF00883 Cytosol aminopeptidase family, catalytic domain XCC0649 PF02789 Cytosol aminopeptidase family, N-terminal domain XCC0651 PF03739 Lipopolysaccharide export system permease LptF/LptG XCC0654 PF02899 Phage integrase, N-terminal SAM-like domain XCC0654 PF00589 Phage integrase family XCC0655 PF13098 Thioredoxin-like domain XCC0655 PF10411 Disulfide bond isomerase protein N-terminus XCC0656 PF02769 AIR synthase related protein, C-terminal domain XCC0656 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XCC0656 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XCC0658 PF13018 Extended Signal Peptide of Type V secretion system XCC0658 PF03895 YadA-like membrane anchor domain XCC0658 PF05658 Head domain of trimeric autotransporter adhesin XCC0658 PF05662 Coiled stalk of trimeric autotransporter adhesin XCC0659 PF00082 Subtilase family XCC0659 PF04151 Bacterial pre-peptidase C-terminal domain XCC0660 PF00437 Type II/IV secretion system protein XCC0660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCC0661 PF00482 Type II secretion system (T2SS), protein F XCC0662 PF08334 Type II secretion system (T2SS), protein G XCC0663 PF12019 Type II transport protein GspH XCC0664 PF07963 Prokaryotic N-terminal methylation motif XCC0666 PF03934 Type II secretion system (T2SS), protein K XCC0667 PF05137 Fimbrial assembly protein (PilN) XCC0668 PF10741 Type II secretion system (T2SS), protein M subtype b XCC0670 PF00263 Bacterial type II and III secretion system protein XCC0670 PF03958 Bacterial type II/III secretion system short domain XCC0672 PF07702 UTRA domain XCC0672 PF00392 Bacterial regulatory proteins, gntR family XCC0674 PF00593 TonB dependent receptor XCC0674 PF07715 TonB-dependent Receptor Plug Domain XCC0681 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XCC0681 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XCC0682 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) XCC0683 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) XCC0686 PF03960 ArsC family XCC0687 PF01327 Polypeptide deformylase XCC0688 PF00005 ABC transporter XCC0688 PF12848 ABC transporter XCC0690 PF00464 Serine hydroxymethyltransferase XCC0691 PF03477 ATP cone domain XCC0693 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XCC0693 PF01872 RibD C-terminal domain XCC0695 PF00677 Lumazine binding domain XCC0696 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XCC0696 PF00925 GTP cyclohydrolase II XCC0697 PF00885 6,7-dimethyl-8-ribityllumazine synthase XCC0698 PF01029 NusB family XCC0699 PF02769 AIR synthase related protein, C-terminal domain XCC0699 PF00586 AIR synthase related protein, N-terminal domain XCC0702 PF03814 Potassium-transporting ATPase A subunit XCC0704 PF02669 K+-transporting ATPase, c chain XCC0705 PF13493 Domain of unknown function (DUF4118) XCC0705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0705 PF00512 His Kinase A (phospho-acceptor) domain XCC0705 PF02702 Osmosensitive K+ channel His kinase sensor domain XCC0705 PF13492 GAF domain XCC0706 PF00072 Response regulator receiver domain XCC0706 PF00486 Transcriptional regulatory protein, C terminal XCC0708 PF01565 FAD binding domain XCC0708 PF02913 FAD linked oxidases, C-terminal domain XCC0709 PF04307 LexA-binding, inner membrane-associated putative hydrolase XCC0710 PF02021 Uncharacterised protein family UPF0102 XCC0712 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCC0717 PF02381 MraZ protein, putative antitoxin-like XCC0718 PF01795 MraW methylase family XCC0719 PF04999 Cell division protein FtsL XCC0720 PF03717 Penicillin-binding Protein dimerisation domain XCC0720 PF00905 Penicillin binding protein transpeptidase domain XCC0721 PF01225 Mur ligase family, catalytic domain XCC0721 PF08245 Mur ligase middle domain XCC0721 PF02875 Mur ligase family, glutamate ligase domain XCC0722 PF08245 Mur ligase middle domain XCC0722 PF02875 Mur ligase family, glutamate ligase domain XCC0722 PF01225 Mur ligase family, catalytic domain XCC0723 PF00953 Glycosyl transferase family 4 XCC0724 PF01098 Cell cycle protein XCC0725 PF03033 Glycosyltransferase family 28 N-terminal domain XCC0725 PF04101 Glycosyltransferase family 28 C-terminal domain XCC0726 PF08245 Mur ligase middle domain XCC0726 PF02875 Mur ligase family, glutamate ligase domain XCC0726 PF01225 Mur ligase family, catalytic domain XCC0727 PF07478 D-ala D-ala ligase C-terminus XCC0727 PF01820 D-ala D-ala ligase N-terminus XCC0728 PF08478 POTRA domain, FtsQ-type XCC0728 PF03799 Cell division protein FtsQ XCC0729 PF02491 SHS2 domain inserted in FTSA XCC0730 PF12327 FtsZ family, C-terminal domain XCC0730 PF00091 Tubulin/FtsZ family, GTPase domain XCC0731 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XCC0733 PF01551 Peptidase family M23 XCC0733 PF08525 Opacity-associated protein A N-terminal motif XCC0733 PF01476 LysM domain XCC0734 PF02810 SEC-C motif XCC0734 PF07517 SecA DEAD-like domain XCC0734 PF01043 SecA preprotein cross-linking domain XCC0734 PF07516 SecA Wing and Scaffold domain XCC0736 PF00293 NUDIX domain XCC0739 PF02219 Methylenetetrahydrofolate reductase XCC0742 PF14765 Polyketide synthase dehydratase XCC0742 PF00550 Phosphopantetheine attachment site XCC0742 PF08659 KR domain XCC0742 PF02801 Beta-ketoacyl synthase, C-terminal domain XCC0742 PF00109 Beta-ketoacyl synthase, N-terminal domain XCC0742 PF16197 Ketoacyl-synthetase C-terminal extension XCC0742 PF00107 Zinc-binding dehydrogenase XCC0742 PF00698 Acyl transferase domain XCC0742 PF08240 Alcohol dehydrogenase GroES-like domain XCC0744 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCC0748 PF00128 Alpha amylase, catalytic domain XCC0752 PF05221 S-adenosyl-L-homocysteine hydrolase XCC0752 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XCC0754 PF00311 Phosphoenolpyruvate carboxylase XCC0758 PF01389 OmpA-like transmembrane domain XCC0758 PF00691 OmpA family XCC0760 PF00328 Histidine phosphatase superfamily (branch 2) XCC0761 PF02773 S-adenosylmethionine synthetase, C-terminal domain XCC0761 PF02772 S-adenosylmethionine synthetase, central domain XCC0761 PF00438 S-adenosylmethionine synthetase, N-terminal domain XCC0763 PF01207 Dihydrouridine synthase (Dus) XCC0764 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XCC0764 PF00294 pfkB family carbohydrate kinase XCC0765 PF01773 Na+ dependent nucleoside transporter N-terminus XCC0765 PF07662 Na+ dependent nucleoside transporter C-terminus XCC0765 PF07670 Nucleoside recognition XCC0766 PF00248 Aldo/keto reductase family XCC0768 PF07715 TonB-dependent Receptor Plug Domain XCC0768 PF00593 TonB dependent receptor XCC0772 PF00528 Binding-protein-dependent transport system inner membrane component XCC0773 PF00005 ABC transporter XCC0775 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XCC0777 PF00005 ABC transporter XCC0778 PF13472 GDSL-like Lipase/Acylhydrolase family XCC0779 PF00486 Transcriptional regulatory protein, C terminal XCC0779 PF00072 Response regulator receiver domain XCC0780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0780 PF00512 His Kinase A (phospho-acceptor) domain XCC0780 PF08521 Two-component sensor kinase N-terminal XCC0782 PF01219 Prokaryotic diacylglycerol kinase XCC0786 PF01790 Prolipoprotein diacylglyceryl transferase XCC0787 PF00303 Thymidylate synthase XCC0788 PF00186 Dihydrofolate reductase XCC0789 PF00149 Calcineurin-like phosphoesterase XCC0790 PF04379 ApaG domain XCC0791 PF00398 Ribosomal RNA adenine dimethylase XCC0792 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XCC0793 PF00639 PPIC-type PPIASE domain XCC0793 PF09312 SurA N-terminal domain XCC0794 PF04453 LPS transport system D XCC0794 PF03968 OstA-like protein XCC0795 PF00850 Histone deacetylase domain XCC0796 PF01923 Cobalamin adenosyltransferase XCC0798 PF01494 FAD binding domain XCC0799 PF01494 FAD binding domain XCC0803 PF00392 Bacterial regulatory proteins, gntR family XCC0803 PF07729 FCD domain XCC0804 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCC0805 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCC0805 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit XCC0806 PF03466 LysR substrate binding domain XCC0806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0807 PF00501 AMP-binding enzyme XCC0807 PF13193 AMP-binding enzyme C-terminal domain XCC0808 PF00171 Aldehyde dehydrogenase family XCC0809 PF00171 Aldehyde dehydrogenase family XCC0810 PF00378 Enoyl-CoA hydratase/isomerase XCC0814 PF08450 SMP-30/Gluconolactonase/LRE-like region XCC0815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCC0815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XCC0816 PF01728 FtsJ-like methyltransferase XCC0816 PF18125 RlmM ferredoxin-like domain XCC0819 PF00892 EamA-like transporter family XCC0820 PF12833 Helix-turn-helix domain XCC0820 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term XCC0821 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XCC0821 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCC0824 PF00072 Response regulator receiver domain XCC0824 PF00990 Diguanylate cyclase, GGDEF domain XCC0825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0825 PF00672 HAMP domain XCC0825 PF00512 His Kinase A (phospho-acceptor) domain XCC0825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCC0825 PF00072 Response regulator receiver domain XCC0825 PF01627 Hpt domain XCC0826 PF00196 Bacterial regulatory proteins, luxR family XCC0826 PF00072 Response regulator receiver domain XCC0828 PF01625 Peptide methionine sulfoxide reductase XCC0830 PF00923 Transaldolase/Fructose-6-phosphate aldolase XCC0831 PF14760 Rnk N-terminus XCC0831 PF01272 Transcription elongation factor, GreA/GreB, C-term XCC0832 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC0832 PF03466 LysR substrate binding domain XCC0833 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC0833 PF13192 Thioredoxin domain XCC0834 PF10417 C-terminal domain of 1-Cys peroxiredoxin XCC0834 PF00578 AhpC/TSA family XCC0835 PF17827 PrmC N-terminal domain XCC0835 PF05175 Methyltransferase small domain XCC0836 PF00561 alpha/beta hydrolase fold XCC0838 PF00293 NUDIX domain XCC0839 PF00476 DNA polymerase family A XCC0839 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XCC0839 PF01612 3'-5' exonuclease XCC0839 PF01367 5'-3' exonuclease, C-terminal SAM fold XCC0840 PF00881 Nitroreductase family XCC0850 PF01063 Amino-transferase class IV XCC0851 PF04151 Bacterial pre-peptidase C-terminal domain XCC0851 PF00082 Subtilase family XCC0852 PF00082 Subtilase family XCC0852 PF04151 Bacterial pre-peptidase C-terminal domain XCC0853 PF04151 Bacterial pre-peptidase C-terminal domain XCC0853 PF00082 Subtilase family XCC0854 PF00082 Subtilase family XCC0854 PF04151 Bacterial pre-peptidase C-terminal domain XCC0855 PF04073 Aminoacyl-tRNA editing domain XCC0857 PF17189 Glycosyl hydrolase family 30 beta sandwich domain XCC0857 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain XCC0859 PF03358 NADPH-dependent FMN reductase XCC0860 PF03631 Virulence factor BrkB XCC0861 PF08534 Redoxin XCC0862 PF00708 Acylphosphatase XCC0864 PF03976 Polyphosphate kinase 2 (PPK2) XCC0865 PF00994 Probable molybdopterin binding domain XCC0867 PF00472 RF-1 domain XCC0867 PF03462 PCRF domain XCC0868 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XCC0868 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XCC0868 PF01488 Shikimate / quinate 5-dehydrogenase XCC0870 PF03550 Outer membrane lipoprotein LolB XCC0871 PF00288 GHMP kinases N terminal domain XCC0871 PF08544 GHMP kinases C terminal XCC0873 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XCC0873 PF14572 Phosphoribosyl synthetase-associated domain XCC0874 PF14693 Ribosomal protein TL5, C-terminal domain XCC0874 PF01386 Ribosomal L25p family XCC0875 PF01195 Peptidyl-tRNA hydrolase XCC0876 PF06071 Protein of unknown function (DUF933) XCC0876 PF01926 50S ribosome-binding GTPase XCC0880 PF03144 Elongation factor Tu domain 2 XCC0880 PF00009 Elongation factor Tu GTP binding domain XCC0880 PF03143 Elongation factor Tu C-terminal domain XCC0882 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XCC0883 PF00467 KOW motif XCC0883 PF02357 Transcription termination factor nusG XCC0884 PF00298 Ribosomal protein L11, RNA binding domain XCC0884 PF03946 Ribosomal protein L11, N-terminal domain XCC0885 PF00687 Ribosomal protein L1p/L10e family XCC0886 PF00466 Ribosomal protein L10 XCC0887 PF00542 Ribosomal protein L7/L12 C-terminal domain XCC0887 PF16320 Ribosomal protein L7/L12 dimerisation domain XCC0888 PF04560 RNA polymerase Rpb2, domain 7 XCC0888 PF04565 RNA polymerase Rpb2, domain 3 XCC0888 PF10385 RNA polymerase beta subunit external 1 domain XCC0888 PF04563 RNA polymerase beta subunit XCC0888 PF04561 RNA polymerase Rpb2, domain 2 XCC0888 PF00562 RNA polymerase Rpb2, domain 6 XCC0889 PF05000 RNA polymerase Rpb1, domain 4 XCC0889 PF04998 RNA polymerase Rpb1, domain 5 XCC0889 PF04997 RNA polymerase Rpb1, domain 1 XCC0889 PF04983 RNA polymerase Rpb1, domain 3 XCC0889 PF00623 RNA polymerase Rpb1, domain 2 XCC0890 PF00164 Ribosomal protein S12/S23 XCC0891 PF00177 Ribosomal protein S7p/S5e XCC0892 PF03764 Elongation factor G, domain IV XCC0892 PF00009 Elongation factor Tu GTP binding domain XCC0892 PF03144 Elongation factor Tu domain 2 XCC0892 PF00679 Elongation factor G C-terminus XCC0892 PF14492 Elongation Factor G, domain II XCC0893 PF00009 Elongation factor Tu GTP binding domain XCC0893 PF03143 Elongation factor Tu C-terminal domain XCC0893 PF03144 Elongation factor Tu domain 2 XCC0894 PF00338 Ribosomal protein S10p/S20e XCC0895 PF00297 Ribosomal protein L3 XCC0896 PF00573 Ribosomal protein L4/L1 family XCC0897 PF00276 Ribosomal protein L23 XCC0898 PF00181 Ribosomal Proteins L2, RNA binding domain XCC0898 PF03947 Ribosomal Proteins L2, C-terminal domain XCC0899 PF00203 Ribosomal protein S19 XCC0900 PF00237 Ribosomal protein L22p/L17e XCC0901 PF00189 Ribosomal protein S3, C-terminal domain XCC0901 PF07650 KH domain XCC0902 PF00252 Ribosomal protein L16p/L10e XCC0903 PF00831 Ribosomal L29 protein XCC0904 PF00366 Ribosomal protein S17 XCC0905 PF00238 Ribosomal protein L14p/L23e XCC0906 PF00467 KOW motif XCC0906 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XCC0907 PF00281 Ribosomal protein L5 XCC0907 PF00673 ribosomal L5P family C-terminus XCC0908 PF00253 Ribosomal protein S14p/S29e XCC0909 PF00410 Ribosomal protein S8 XCC0910 PF00347 Ribosomal protein L6 XCC0911 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XCC0912 PF00333 Ribosomal protein S5, N-terminal domain XCC0912 PF03719 Ribosomal protein S5, C-terminal domain XCC0913 PF00327 Ribosomal protein L30p/L7e XCC0914 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XCC0915 PF00344 SecY translocase XCC0916 PF00416 Ribosomal protein S13/S18 XCC0917 PF00411 Ribosomal protein S11 XCC0918 PF01479 S4 domain XCC0918 PF00163 Ribosomal protein S4/S9 N-terminal domain XCC0919 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XCC0919 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XCC0919 PF01000 RNA polymerase Rpb3/RpoA insert domain XCC0920 PF01196 Ribosomal protein L17 XCC0921 PF02600 Disulfide bond formation protein DsbB XCC0922 PF01474 Class-II DAHP synthetase family XCC0924 PF01425 Amidase XCC0926 PF03144 Elongation factor Tu domain 2 XCC0926 PF00009 Elongation factor Tu GTP binding domain XCC0926 PF00679 Elongation factor G C-terminus XCC0927 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XCC0928 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XCC0928 PF00056 lactate/malate dehydrogenase, NAD binding domain XCC0929 PF02798 Glutathione S-transferase, N-terminal domain XCC0929 PF00043 Glutathione S-transferase, C-terminal domain XCC0933 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC0933 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCC0934 PF08240 Alcohol dehydrogenase GroES-like domain XCC0934 PF00107 Zinc-binding dehydrogenase XCC0935 PF05736 OprF membrane domain XCC0935 PF00691 OmpA family XCC0937 PF00849 RNA pseudouridylate synthase XCC0939 PF00155 Aminotransferase class I and II XCC0941 PF00528 Binding-protein-dependent transport system inner membrane component XCC0942 PF00528 Binding-protein-dependent transport system inner membrane component XCC0943 PF00005 ABC transporter XCC0943 PF12857 TOBE-like domain XCC0945 PF00107 Zinc-binding dehydrogenase XCC0945 PF08240 Alcohol dehydrogenase GroES-like domain XCC0947 PF05506 Domain of unknown function (DUF756) XCC0947 PF04185 Phosphoesterase family XCC0948 PF00300 Histidine phosphatase superfamily (branch 1) XCC0950 PF02875 Mur ligase family, glutamate ligase domain XCC0950 PF08245 Mur ligase middle domain XCC0953 PF00156 Phosphoribosyl transferase domain XCC0954 PF04305 Protein of unknown function (DUF455) XCC0957 PF00149 Calcineurin-like phosphoesterase XCC0958 PF01569 PAP2 superfamily XCC0959 PF13439 Glycosyltransferase Family 4 XCC0959 PF00534 Glycosyl transferases group 1 XCC0960 PF02541 Ppx/GppA phosphatase family XCC0961 PF13090 Polyphosphate kinase C-terminal domain 2 XCC0961 PF13089 Polyphosphate kinase N-terminal domain XCC0961 PF02503 Polyphosphate kinase middle domain XCC0961 PF17941 Polyphosphate kinase C-terminal domain 1 XCC0962 PF11808 Phosphate regulon sensor protein PhoR XCC0962 PF00989 PAS fold XCC0962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC0962 PF00512 His Kinase A (phospho-acceptor) domain XCC0963 PF00072 Response regulator receiver domain XCC0963 PF00486 Transcriptional regulatory protein, C terminal XCC0964 PF13181 Tetratricopeptide repeat XCC0964 PF01435 Peptidase family M48 XCC0965 PF00462 Glutaredoxin XCC0967 PF18324 Hypothetical protein TT1725 XCC0967 PF00180 Isocitrate/isopropylmalate dehydrogenase XCC0974 PF05697 Bacterial trigger factor protein (TF) XCC0974 PF05698 Bacterial trigger factor protein (TF) C-terminus XCC0975 PF00574 Clp protease XCC0976 PF07724 AAA domain (Cdc48 subfamily) XCC0976 PF10431 C-terminal, D2-small domain, of ClpB protein XCC0976 PF06689 ClpX C4-type zinc finger XCC0977 PF02190 ATP-dependent protease La (LON) substrate-binding domain XCC0977 PF05362 Lon protease (S16) C-terminal proteolytic domain XCC0977 PF00004 ATPase family associated with various cellular activities (AAA) XCC0978 PF00216 Bacterial DNA-binding protein XCC0984 PF01476 LysM domain XCC0984 PF05257 CHAP domain XCC0985 PF00753 Metallo-beta-lactamase superfamily XCC0985 PF16123 Hydroxyacylglutathione hydrolase C-terminus XCC0987 PF00075 RNase H XCC0988 PF00929 Exonuclease XCC0992 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XCC0994 PF12706 Beta-lactamase superfamily domain XCC0994 PF00753 Metallo-beta-lactamase superfamily XCC0995 PF04055 Radical SAM superfamily XCC0995 PF06463 Molybdenum Cofactor Synthesis C XCC0997 PF01967 MoaC family XCC0998 PF02597 ThiS family XCC0999 PF02391 MoaE protein XCC1001 PF12170 DNA polymerase III tau subunit V interacting with alpha XCC1001 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XCC1001 PF12169 DNA polymerase III subunits gamma and tau domain III XCC1002 PF02575 YbaB/EbfC DNA-binding family XCC1003 PF13662 Toprim domain XCC1003 PF02132 RecR protein XCC1004 PF01230 HIT domain XCC1006 PF11992 Domain of unknown function (DUF3488) XCC1006 PF01841 Transglutaminase-like superfamily XCC1006 PF13559 Domain of unknown function (DUF4129) XCC1008 PF17863 AAA lid domain XCC1008 PF07726 ATPase family associated with various cellular activities (AAA) XCC1010 PF00535 Glycosyl transferase family 2 XCC1013 PF02545 Maf-like protein XCC1014 PF02620 Large ribosomal RNA subunit accumulation protein YceD XCC1015 PF01783 Ribosomal L32p protein family XCC1016 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCC1016 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCC1017 PF00698 Acyl transferase domain XCC1019 PF00550 Phosphopantetheine attachment site XCC1020 PF00109 Beta-ketoacyl synthase, N-terminal domain XCC1020 PF02801 Beta-ketoacyl synthase, C-terminal domain XCC1021 PF04715 Anthranilate synthase component I, N terminal region XCC1021 PF00425 chorismate binding enzyme XCC1022 PF02618 YceG-like family XCC1023 PF09115 DNA polymerase III, delta subunit, C terminal XCC1030 PF00158 Sigma-54 interaction domain XCC1030 PF06506 Propionate catabolism activator XCC1030 PF02954 Bacterial regulatory protein, Fis family XCC1032 PF00285 Citrate synthase, C-terminal domain XCC1033 PF00330 Aconitase family (aconitate hydratase) XCC1033 PF00694 Aconitase C-terminal domain XCC1034 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH XCC1036 PF04303 PrpF protein XCC1037 PF00593 TonB dependent receptor XCC1037 PF07715 TonB-dependent Receptor Plug Domain XCC1039 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XCC1039 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XCC1039 PF07703 Alpha-2-macroglobulin bait region domain XCC1039 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XCC1039 PF00207 Alpha-2-macroglobulin family XCC1039 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XCC1039 PF01835 MG2 domain XCC1039 PF17962 Bacterial macroglobulin domain 6 XCC1044 PF00905 Penicillin binding protein transpeptidase domain XCC1044 PF00912 Transglycosylase XCC1044 PF06832 Penicillin-Binding Protein C-terminus Family XCC1046 PF08534 Redoxin XCC1047 PF00011 Hsp20/alpha crystallin family XCC1048 PF00226 DnaJ domain XCC1048 PF01556 DnaJ C terminal domain XCC1049 PF00072 Response regulator receiver domain XCC1050 PF01145 SPFH domain / Band 7 family XCC1050 PF12221 Bacterial membrane protein N terminal XCC1051 PF01145 SPFH domain / Band 7 family XCC1053 PF00709 Adenylosuccinate synthetase XCC1054 PF11838 ERAP1-like C-terminal domain XCC1054 PF01433 Peptidase family M1 domain XCC1058 PF00440 Bacterial regulatory proteins, tetR family XCC1068 PF01555 DNA methylase XCC1069 PF13361 UvrD-like helicase C-terminal domain XCC1069 PF00580 UvrD/REP helicase N-terminal domain XCC1075 PF13456 Reverse transcriptase-like XCC1075 PF00300 Histidine phosphatase superfamily (branch 1) XCC1076 PF01256 Carbohydrate kinase XCC1078 PF00723 Glycosyl hydrolases family 15 XCC1081 PF17678 Glycosyl hydrolase family 92 N-terminal domain XCC1081 PF07971 Glycosyl hydrolase family 92 XCC1082 PF00106 short chain dehydrogenase XCC1084 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC1088 PF17755 UvrA DNA-binding domain XCC1090 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCC1090 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC1090 PF14310 Fibronectin type III-like domain XCC1091 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XCC1091 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCC1092 PF03450 CO dehydrogenase flavoprotein C-terminal domain XCC1092 PF00941 FAD binding domain in molybdopterin dehydrogenase XCC1093 PF00111 2Fe-2S iron-sulfur cluster binding domain XCC1093 PF01799 [2Fe-2S] binding domain XCC1093 PF10518 TAT (twin-arginine translocation) pathway signal sequence XCC1098 PF01726 LexA DNA binding domain XCC1098 PF00717 Peptidase S24-like XCC1101 PF14579 Helix-hairpin-helix motif XCC1101 PF02811 PHP domain XCC1101 PF07733 Bacterial DNA polymerase III alpha NTPase domain XCC1101 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XCC1103 PF03169 OPT oligopeptide transporter protein XCC1105 PF07676 WD40-like Beta Propeller Repeat XCC1105 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCC1105 PF00326 Prolyl oligopeptidase family XCC1108 PF02311 AraC-like ligand binding domain XCC1108 PF12833 Helix-turn-helix domain XCC1109 PF18011 C-terminal domain found in long catalases XCC1109 PF00199 Catalase XCC1109 PF06628 Catalase-related immune-responsive XCC1110 PF00248 Aldo/keto reductase family XCC1112 PF02347 Glycine cleavage system P-protein XCC1113 PF07690 Major Facilitator Superfamily XCC1117 PF08019 Phosphoethanolamine transferase EptA/EptB XCC1117 PF00884 Sulfatase XCC1120 PF00072 Response regulator receiver domain XCC1120 PF00486 Transcriptional regulatory protein, C terminal XCC1121 PF00512 His Kinase A (phospho-acceptor) domain XCC1121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1123 PF03776 Septum formation topological specificity factor MinE XCC1124 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCC1125 PF05209 Septum formation inhibitor MinC, N-terminal domain XCC1125 PF03775 Septum formation inhibitor MinC, C-terminal domain XCC1127 PF07730 Histidine kinase XCC1128 PF00196 Bacterial regulatory proteins, luxR family XCC1128 PF00072 Response regulator receiver domain XCC1131 PF00730 HhH-GPD superfamily base excision DNA repair protein XCC1137 PF02222 ATP-grasp domain XCC1137 PF01370 NAD dependent epimerase/dehydratase family XCC1141 PF04377 Arginine-tRNA-protein transferase, C terminus XCC1141 PF04376 Arginine-tRNA-protein transferase, N terminus XCC1143 PF04542 Sigma-70 region 2 XCC1143 PF08281 Sigma-70, region 4 XCC1146 PF00378 Enoyl-CoA hydratase/isomerase XCC1148 PF17755 UvrA DNA-binding domain XCC1148 PF17760 UvrA interaction domain XCC1148 PF00005 ABC transporter XCC1149 PF00829 Ribosomal prokaryotic L21 protein XCC1150 PF01016 Ribosomal L27 protein XCC1151 PF01018 GTP1/OBG XCC1151 PF01926 50S ribosome-binding GTPase XCC1152 PF01649 Ribosomal protein S20 XCC1153 PF03023 Lipid II flippase MurJ XCC1154 PF01687 Riboflavin kinase XCC1154 PF06574 FAD synthetase XCC1155 PF00133 tRNA synthetases class I (I, L, M and V) XCC1155 PF06827 Zinc finger found in FPG and IleRS XCC1155 PF08264 Anticodon-binding domain of tRNA XCC1156 PF01252 Signal peptidase (SPase) II XCC1157 PF02401 LytB protein XCC1159 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XCC1159 PF06481 COX Aromatic Rich Motif XCC1160 PF00115 Cytochrome C and Quinol oxidase polypeptide I XCC1161 PF00510 Cytochrome c oxidase subunit III XCC1162 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XCC1164 PF18073 Rubredoxin metal binding domain XCC1165 PF05656 Protein of unknown function (DUF805) XCC1167 PF12833 Helix-turn-helix domain XCC1168 PF00183 Hsp90 protein XCC1168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCC1171 PF08678 Rsbr N terminal XCC1171 PF01740 STAS domain XCC1172 PF01740 STAS domain XCC1173 PF13581 Histidine kinase-like ATPase domain XCC1175 PF00672 HAMP domain XCC1175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1175 PF01627 Hpt domain XCC1175 PF00512 His Kinase A (phospho-acceptor) domain XCC1175 PF17149 Periplasmic sensor domain found in signal transduction proteins XCC1175 PF00072 Response regulator receiver domain XCC1176 PF00072 Response regulator receiver domain XCC1176 PF13188 PAS domain XCC1176 PF08448 PAS fold XCC1176 PF00512 His Kinase A (phospho-acceptor) domain XCC1176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1178 PF04616 Glycosyl hydrolases family 43 XCC1178 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCC1179 PF00593 TonB dependent receptor XCC1179 PF07715 TonB-dependent Receptor Plug Domain XCC1180 PF00085 Thioredoxin XCC1181 PF07237 Protein of unknown function (DUF1428) XCC1182 PF02702 Osmosensitive K+ channel His kinase sensor domain XCC1182 PF00512 His Kinase A (phospho-acceptor) domain XCC1182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1182 PF13492 GAF domain XCC1182 PF13493 Domain of unknown function (DUF4118) XCC1183 PF01339 CheB methylesterase XCC1184 PF03705 CheR methyltransferase, all-alpha domain XCC1184 PF01739 CheR methyltransferase, SAM binding domain XCC1185 PF00072 Response regulator receiver domain XCC1185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCC1185 PF01627 Hpt domain XCC1185 PF00512 His Kinase A (phospho-acceptor) domain XCC1185 PF00672 HAMP domain XCC1185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1186 PF13426 PAS domain XCC1186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1186 PF00072 Response regulator receiver domain XCC1187 PF00072 Response regulator receiver domain XCC1190 PF03466 LysR substrate binding domain XCC1190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC1191 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XCC1192 PF01263 Aldose 1-epimerase XCC1193 PF01578 Cytochrome C assembly protein XCC1194 PF00448 SRP54-type protein, GTPase domain XCC1194 PF02978 Signal peptide binding domain XCC1194 PF02881 SRP54-type protein, helical bundle domain XCC1196 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) XCC1197 PF03060 Nitronate monooxygenase XCC1199 PF00886 Ribosomal protein S16 XCC1200 PF05239 PRC-barrel domain XCC1200 PF01782 RimM N-terminal domain XCC1201 PF01746 tRNA (Guanine-1)-methyltransferase XCC1202 PF01245 Ribosomal protein L19 XCC1203 PF01554 MatE XCC1204 PF01479 S4 domain XCC1205 PF00141 Peroxidase XCC1207 PF05192 MutS domain III XCC1207 PF05190 MutS family domain IV XCC1207 PF05188 MutS domain II XCC1207 PF00488 MutS domain V XCC1207 PF01624 MutS domain I XCC1209 PF05598 Transposase domain (DUF772) XCC1210 PF03301 Tryptophan 2,3-dioxygenase XCC1212 PF00266 Aminotransferase class-V XCC1214 PF00155 Aminotransferase class I and II XCC1215 PF00440 Bacterial regulatory proteins, tetR family XCC1217 PF05819 NolX protein XCC1219 PF03211 Pectate lyase XCC1225 PF01313 Bacterial export proteins, family 3 XCC1226 PF00813 FliP family XCC1229 PF00771 FHIPEP family XCC1230 PF01312 FlhB HrpN YscU SpaS Family XCC1233 PF01514 Secretory protein of YscJ/FliF family XCC1236 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCC1236 PF02874 ATP synthase alpha/beta family, beta-barrel domain XCC1236 PF18269 T3SS EscN ATPase C-terminal domain XCC1239 PF00263 Bacterial type II and III secretion system protein XCC1239 PF03958 Bacterial type II/III secretion system short domain XCC1241 PF01464 Transglycosylase SLT domain XCC1248 PF05598 Transposase domain (DUF772) XCC1248 PF01609 Transposase DDE domain XCC1250 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC1250 PF14310 Fibronectin type III-like domain XCC1250 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCC1255 PF05598 Transposase domain (DUF772) XCC1256 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XCC1256 PF16355 Domain of unknown function (DUF4982) XCC1256 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCC1256 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCC1256 PF00703 Glycosyl hydrolases family 2 XCC1257 PF07745 Glycosyl hydrolase family 53 XCC1259 PF06114 IrrE N-terminal-like domain XCC1259 PF09856 Predicted transcriptional regulator (DUF2083) XCC1259 PF01381 Helix-turn-helix XCC1260 PF00171 Aldehyde dehydrogenase family XCC1261 PF02770 Acyl-CoA dehydrogenase, middle domain XCC1261 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCC1261 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCC1262 PF00378 Enoyl-CoA hydratase/isomerase XCC1263 PF00378 Enoyl-CoA hydratase/isomerase XCC1264 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCC1264 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XCC1265 PF01545 Cation efflux family XCC1266 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XCC1266 PF00378 Enoyl-CoA hydratase/isomerase XCC1266 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XCC1267 PF08281 Sigma-70, region 4 XCC1267 PF04542 Sigma-70 region 2 XCC1269 PF13180 PDZ domain XCC1270 PF03144 Elongation factor Tu domain 2 XCC1270 PF00009 Elongation factor Tu GTP binding domain XCC1270 PF06421 GTP-binding protein LepA C-terminus XCC1270 PF00679 Elongation factor G C-terminus XCC1271 PF10502 Signal peptidase, peptidase S26 XCC1273 PF14622 Ribonuclease-III-like XCC1273 PF00035 Double-stranded RNA binding motif XCC1274 PF07650 KH domain XCC1274 PF01926 50S ribosome-binding GTPase XCC1275 PF11967 Recombination protein O N terminal XCC1275 PF02565 Recombination protein O C terminal XCC1276 PF00072 Response regulator receiver domain XCC1276 PF00486 Transcriptional regulatory protein, C terminal XCC1277 PF05958 tRNA (Uracil-5-)-methyltransferase XCC1279 PF01928 CYTH domain XCC1280 PF01323 DSBA-like thioredoxin domain XCC1281 PF05430 S-adenosyl-L-methionine-dependent methyltransferase XCC1281 PF01266 FAD dependent oxidoreductase XCC1282 PF04244 Deoxyribodipyrimidine photo-lyase-related protein XCC1283 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC1284 PF00156 Phosphoribosyl transferase domain XCC1285 PF01048 Phosphorylase superfamily XCC1286 PF00313 'Cold-shock' DNA-binding domain XCC1287 PF01494 FAD binding domain XCC1289 PF00270 DEAD/DEAH box helicase XCC1289 PF00271 Helicase conserved C-terminal domain XCC1289 PF08494 DEAD/H associated XCC1290 PF04679 ATP dependent DNA ligase C terminal region XCC1290 PF01068 ATP dependent DNA ligase domain XCC1290 PF04675 DNA ligase N terminus XCC1291 PF01068 ATP dependent DNA ligase domain XCC1291 PF04675 DNA ligase N terminus XCC1291 PF04679 ATP dependent DNA ligase C terminal region XCC1294 PF00990 Diguanylate cyclase, GGDEF domain XCC1294 PF00072 Response regulator receiver domain XCC1297 PF02803 Thiolase, C-terminal domain XCC1297 PF00108 Thiolase, N-terminal domain XCC1298 PF03797 Autotransporter beta-domain XCC1298 PF00082 Subtilase family XCC1299 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XCC1299 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XCC1301 PF01863 Protein of unknown function DUF45 XCC1302 PF07043 Protein of unknown function (DUF1328) XCC1304 PF01258 Prokaryotic dksA/traR C4-type zinc finger XCC1306 PF08281 Sigma-70, region 4 XCC1306 PF04542 Sigma-70 region 2 XCC1310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCC1312 PF08274 PhnA Zinc-Ribbon XCC1312 PF03831 PhnA domain XCC1315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XCC1316 PF07690 Major Facilitator Superfamily XCC1323 PF03706 Lysylphosphatidylglycerol synthase TM region XCC1323 PF09924 Uncharacterised conserved protein (DUF2156) XCC1325 PF01042 Endoribonuclease L-PSP XCC1334 PF04542 Sigma-70 region 2 XCC1334 PF04545 Sigma-70, region 4 XCC1337 PF04060 Putative Fe-S cluster XCC1339 PF01588 Putative tRNA binding domain XCC1339 PF09334 tRNA synthetases class I (M) XCC1340 PF07715 TonB-dependent Receptor Plug Domain XCC1340 PF00593 TonB dependent receptor XCC1342 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCC1343 PF00324 Amino acid permease XCC1344 PF02574 Homocysteine S-methyltransferase XCC1346 PF02592 Putative vitamin uptake transporter XCC1351 PF03551 Transcriptional regulator PadR-like family XCC1355 PF03653 Uncharacterised protein family (UPF0093) XCC1357 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XCC1358 PF07733 Bacterial DNA polymerase III alpha NTPase domain XCC1358 PF01336 OB-fold nucleic acid binding domain XCC1358 PF02811 PHP domain XCC1358 PF14579 Helix-hairpin-helix motif XCC1358 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XCC1359 PF01351 Ribonuclease HII XCC1360 PF02684 Lipid-A-disaccharide synthetase XCC1361 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XCC1361 PF00132 Bacterial transferase hexapeptide (six repeats) XCC1362 PF07977 FabA-like domain XCC1363 PF00132 Bacterial transferase hexapeptide (six repeats) XCC1363 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XCC1365 PF07244 Surface antigen variable number repeat XCC1365 PF01103 Surface antigen XCC1366 PF02163 Peptidase family M50 XCC1366 PF17820 PDZ domain XCC1367 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XCC1367 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XCC1367 PF13288 DXP reductoisomerase C-terminal domain XCC1369 PF01255 Putative undecaprenyl diphosphate synthase XCC1370 PF01765 Ribosome recycling factor XCC1371 PF00696 Amino acid kinase family XCC1372 PF00990 Diguanylate cyclase, GGDEF domain XCC1372 PF00072 Response regulator receiver domain XCC1374 PF00889 Elongation factor TS XCC1375 PF00318 Ribosomal protein S2 XCC1378 PF05229 Spore Coat Protein U domain XCC1382 PF00557 Metallopeptidase family M24 XCC1383 PF01966 HD domain XCC1383 PF08335 GlnD PII-uridylyltransferase XCC1383 PF01909 Nucleotidyltransferase domain XCC1384 PF00132 Bacterial transferase hexapeptide (six repeats) XCC1384 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XCC1384 PF14602 Hexapeptide repeat of succinyl-transferase XCC1386 PF03960 ArsC family XCC1387 PF01546 Peptidase family M20/M25/M40 XCC1387 PF07687 Peptidase dimerisation domain XCC1388 PF00733 Asparagine synthase XCC1388 PF13537 Glutamine amidotransferase domain XCC1391 PF00593 TonB dependent receptor XCC1391 PF07715 TonB-dependent Receptor Plug Domain XCC1392 PF01804 Penicillin amidase XCC1393 PF00210 Ferritin-like domain XCC1394 PF05724 Thiopurine S-methyltransferase (TPMT) XCC1395 PF03989 DNA gyrase C-terminal domain, beta-propeller XCC1395 PF00521 DNA gyrase/topoisomerase IV, subunit A XCC1398 PF02321 Outer membrane efflux protein XCC1399 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC1399 PF00529 HlyD membrane-fusion protein of T1SS XCC1400 PF07690 Major Facilitator Superfamily XCC1404 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCC1404 PF14310 Fibronectin type III-like domain XCC1404 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC1406 PF00854 POT family XCC1411 PF12802 MarR family XCC1412 PF01432 Peptidase family M3 XCC1413 PF00255 Glutathione peroxidase XCC1414 PF00175 Oxidoreductase NAD-binding domain XCC1414 PF00970 Oxidoreductase FAD-binding domain XCC1415 PF00005 ABC transporter XCC1416 PF05683 Fumarase C-terminus XCC1416 PF05681 Fumarate hydratase (Fumerase) XCC1419 PF00484 Carbonic anhydrase XCC1420 PF02253 Phospholipase A1 XCC1422 PF00313 'Cold-shock' DNA-binding domain XCC1425 PF00899 ThiF family XCC1426 PF01026 TatD related DNase XCC1429 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCC1429 PF02770 Acyl-CoA dehydrogenase, middle domain XCC1429 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCC1431 PF02798 Glutathione S-transferase, N-terminal domain XCC1431 PF00043 Glutathione S-transferase, C-terminal domain XCC1432 PF13537 Glutamine amidotransferase domain XCC1432 PF00733 Asparagine synthase XCC1433 PF03358 NADPH-dependent FMN reductase XCC1434 PF00772 DnaB-like helicase N terminal domain XCC1434 PF03796 DnaB-like helicase C terminal domain XCC1435 PF00875 DNA photolyase XCC1435 PF03441 FAD binding domain of DNA photolyase XCC1436 PF05736 OprF membrane domain XCC1436 PF00691 OmpA family XCC1437 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC1437 PF03466 LysR substrate binding domain XCC1439 PF00529 HlyD membrane-fusion protein of T1SS XCC1439 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC1440 PF00873 AcrB/AcrD/AcrF family XCC1442 PF02321 Outer membrane efflux protein XCC1443 PF00990 Diguanylate cyclase, GGDEF domain XCC1445 PF00990 Diguanylate cyclase, GGDEF domain XCC1453 PF12419 SNF2 Helicase protein XCC1453 PF00271 Helicase conserved C-terminal domain XCC1453 PF00176 SNF2 family N-terminal domain XCC1454 PF05598 Transposase domain (DUF772) XCC1455 PF13276 HTH-like domain XCC1455 PF13683 Integrase core domain XCC1456 PF01527 Transposase XCC1465 PF00082 Subtilase family XCC1466 PF01668 SmpB protein XCC1468 PF03658 RnfH family Ubiquitin XCC1469 PF04355 SmpA / OmlA family XCC1470 PF01475 Ferric uptake regulator family XCC1471 PF02463 RecF/RecN/SMC N terminal domain XCC1472 PF01628 HrcA protein C terminal domain XCC1472 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XCC1473 PF01025 GrpE XCC1474 PF00012 Hsp70 protein XCC1475 PF00684 DnaJ central domain XCC1475 PF01556 DnaJ C terminal domain XCC1475 PF00226 DnaJ domain XCC1476 PF08543 Phosphomethylpyrimidine kinase XCC1480 PF03412 Peptidase C39 family XCC1480 PF00005 ABC transporter XCC1480 PF00664 ABC transporter transmembrane region XCC1481 PF03466 LysR substrate binding domain XCC1481 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC1482 PF00664 ABC transporter transmembrane region XCC1482 PF00005 ABC transporter XCC1483 PF01205 Uncharacterized protein family UPF0029 XCC1484 PF03641 Possible lysine decarboxylase XCC1485 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC1485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCC1486 PF02817 e3 binding domain XCC1486 PF00364 Biotin-requiring enzyme XCC1486 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XCC1487 PF16078 2-oxoglutarate dehydrogenase N-terminus XCC1487 PF00676 Dehydrogenase E1 component XCC1487 PF16870 2-oxoglutarate dehydrogenase C-terminal XCC1487 PF02779 Transketolase, pyrimidine binding domain XCC1489 PF08007 Cupin superfamily protein XCC1492 PF00206 Lyase XCC1492 PF08328 Adenylosuccinate lyase C-terminal XCC1493 PF01595 Cyclin M transmembrane N-terminal domain XCC1493 PF03471 Transporter associated domain XCC1493 PF00571 CBS domain XCC1494 PF00206 Lyase XCC1494 PF10415 Fumarase C C-terminus XCC1499 PF00005 ABC transporter XCC1500 PF00392 Bacterial regulatory proteins, gntR family XCC1501 PF00255 Glutathione peroxidase XCC1502 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XCC1502 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCC1503 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCC1503 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCC1503 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCC1504 PF04102 SlyX XCC1507 PF00356 Bacterial regulatory proteins, lacI family XCC1508 PF07690 Major Facilitator Superfamily XCC1509 PF00294 pfkB family carbohydrate kinase XCC1511 PF02574 Homocysteine S-methyltransferase XCC1511 PF00809 Pterin binding enzyme XCC1511 PF02310 B12 binding domain XCC1511 PF02607 B12 binding domain XCC1511 PF02965 Vitamin B12 dependent methionine synthase, activation domain XCC1512 PF00809 Pterin binding enzyme XCC1512 PF02574 Homocysteine S-methyltransferase XCC1513 PF01209 ubiE/COQ5 methyltransferase family XCC1514 PF02770 Acyl-CoA dehydrogenase, middle domain XCC1514 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCC1514 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCC1517 PF17876 Cold shock domain XCC1517 PF08461 Ribonuclease R winged-helix domain XCC1517 PF08206 Ribonuclease B OB domain XCC1517 PF00773 RNB domain XCC1517 PF00575 S1 RNA binding domain XCC1519 PF08032 RNA 2'-O ribose methyltransferase substrate binding XCC1519 PF00588 SpoU rRNA Methylase family XCC1520 PF00990 Diguanylate cyclase, GGDEF domain XCC1521 PF00929 Exonuclease XCC1523 PF01895 PhoU domain XCC1524 PF00005 ABC transporter XCC1525 PF00528 Binding-protein-dependent transport system inner membrane component XCC1526 PF00528 Binding-protein-dependent transport system inner membrane component XCC1527 PF12849 PBP superfamily domain XCC1528 PF12849 PBP superfamily domain XCC1530 PF00484 Carbonic anhydrase XCC1531 PF01740 STAS domain XCC1531 PF00916 Sulfate permease family XCC1532 PF00730 HhH-GPD superfamily base excision DNA repair protein XCC1532 PF00633 Helix-hairpin-helix motif XCC1532 PF10576 Iron-sulfur binding domain of endonuclease III XCC1534 PF00378 Enoyl-CoA hydratase/isomerase XCC1535 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XCC1535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCC1536 PF00293 NUDIX domain XCC1537 PF00581 Rhodanese-like domain XCC1544 PF12848 ABC transporter XCC1544 PF00005 ABC transporter XCC1545 PF01170 Putative RNA methylase family UPF0020 XCC1545 PF10672 S-adenosylmethionine-dependent methyltransferase XCC1545 PF02926 THUMP domain XCC1546 PF01513 ATP-NAD kinase XCC1551 PF08411 Exonuclease C-terminal XCC1551 PF00929 Exonuclease XCC1552 PF01494 FAD binding domain XCC1553 PF00266 Aminotransferase class-V XCC1555 PF06052 3-hydroxyanthranilic acid dioxygenase XCC1556 PF00484 Carbonic anhydrase XCC1561 PF00152 tRNA synthetases class II (D, K and N) XCC1561 PF01336 OB-fold nucleic acid binding domain XCC1562 PF01521 Iron-sulphur cluster biosynthesis XCC1563 PF01250 Ribosomal protein S6 XCC1564 PF01084 Ribosomal protein S18 XCC1565 PF01281 Ribosomal protein L9, N-terminal domain XCC1565 PF03948 Ribosomal protein L9, C-terminal domain XCC1567 PF02463 RecF/RecN/SMC N terminal domain XCC1568 PF04354 ZipA, C-terminal FtsZ-binding domain XCC1569 PF00155 Aminotransferase class I and II XCC1570 PF00533 BRCA1 C Terminus (BRCT) domain XCC1570 PF01653 NAD-dependent DNA ligase adenylation domain XCC1570 PF03120 NAD-dependent DNA ligase OB-fold domain XCC1570 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XCC1570 PF12826 Helix-hairpin-helix motif XCC1571 PF00152 tRNA synthetases class II (D, K and N) XCC1573 PF01008 Initiation factor 2 subunit family XCC1574 PF03989 DNA gyrase C-terminal domain, beta-propeller XCC1574 PF00521 DNA gyrase/topoisomerase IV, subunit A XCC1575 PF13360 PQQ-like domain XCC1577 PF17391 Urocanase N-terminal domain XCC1577 PF17392 Urocanase C-terminal domain XCC1577 PF01175 Urocanase Rossmann-like domain XCC1579 PF00221 Aromatic amino acid lyase XCC1581 PF01979 Amidohydrolase family XCC1582 PF00392 Bacterial regulatory proteins, gntR family XCC1582 PF07702 UTRA domain XCC1587 PF01794 Ferric reductase like transmembrane component XCC1588 PF00174 Oxidoreductase molybdopterin binding domain XCC1589 PF00266 Aminotransferase class-V XCC1590 PF01842 ACT domain XCC1590 PF01817 Chorismate mutase type II XCC1590 PF00800 Prephenate dehydratase XCC1591 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XCC1592 PF03544 Gram-negative bacterial TonB protein C-terminal XCC1593 PF03544 Gram-negative bacterial TonB protein C-terminal XCC1594 PF02403 Seryl-tRNA synthetase N-terminal domain XCC1594 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCC1595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC1595 PF03466 LysR substrate binding domain XCC1598 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) XCC1606 PF01527 Transposase XCC1607 PF13683 Integrase core domain XCC1607 PF13276 HTH-like domain XCC1609 PF01609 Transposase DDE domain XCC1609 PF05598 Transposase domain (DUF772) XCC1619 PF04002 RadC-like JAB domain XCC1627 PF01527 Transposase XCC1628 PF13683 Integrase core domain XCC1628 PF13276 HTH-like domain XCC1630 PF02796 Helix-turn-helix domain of resolvase XCC1630 PF00239 Resolvase, N terminal domain XCC1633 PF00665 Integrase core domain XCC1633 PF13276 HTH-like domain XCC1633 PF13333 Integrase core domain XCC1634 PF01527 Transposase XCC1638 PF05598 Transposase domain (DUF772) XCC1645 PF02585 GlcNAc-PI de-N-acetylase XCC1652 PF00072 Response regulator receiver domain XCC1652 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1652 PF00512 His Kinase A (phospho-acceptor) domain XCC1652 PF08448 PAS fold XCC1652 PF13188 PAS domain XCC1653 PF00158 Sigma-54 interaction domain XCC1653 PF00072 Response regulator receiver domain XCC1653 PF02954 Bacterial regulatory protein, Fis family XCC1654 PF06745 KaiC XCC1655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1655 PF00072 Response regulator receiver domain XCC1655 PF13426 PAS domain XCC1657 PF03918 Cytochrome C biogenesis protein XCC1658 PF08534 Redoxin XCC1659 PF01578 Cytochrome C assembly protein XCC1659 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XCC1660 PF03100 CcmE XCC1661 PF04995 Heme exporter protein D (CcmD) XCC1662 PF01578 Cytochrome C assembly protein XCC1663 PF00082 Subtilase family XCC1665 PF08281 Sigma-70, region 4 XCC1665 PF04542 Sigma-70 region 2 XCC1667 PF00034 Cytochrome c XCC1669 PF01292 Prokaryotic cytochrome b561 XCC1670 PF05523 WxcM-like, C-terminal XCC1671 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCC1672 PF01943 Polysaccharide biosynthesis protein XCC1673 PF00535 Glycosyl transferase family 2 XCC1677 PF13382 Adenine deaminase C-terminal domain XCC1677 PF01979 Amidohydrolase family XCC1679 PF13439 Glycosyltransferase Family 4 XCC1679 PF00534 Glycosyl transferases group 1 XCC1680 PF13579 Glycosyl transferase 4-like domain XCC1680 PF00534 Glycosyl transferases group 1 XCC1684 PF00005 ABC transporter XCC1684 PF00664 ABC transporter transmembrane region XCC1685 PF07690 Major Facilitator Superfamily XCC1686 PF00296 Luciferase-like monooxygenase XCC1689 PF00571 CBS domain XCC1689 PF03471 Transporter associated domain XCC1689 PF01595 Cyclin M transmembrane N-terminal domain XCC1691 PF01384 Phosphate transporter family XCC1694 PF02611 CDP-diacylglycerol pyrophosphatase XCC1695 PF01751 Toprim domain XCC1695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1695 PF00986 DNA gyrase B subunit, carboxyl terminus XCC1695 PF00204 DNA gyrase B XCC1697 PF00117 Glutamine amidotransferase class-I XCC1697 PF06418 CTP synthase N-terminus XCC1698 PF00793 DAHP synthetase I family XCC1700 PF03952 Enolase, N-terminal domain XCC1700 PF00113 Enolase, C-terminal TIM barrel domain XCC1701 PF04977 Septum formation initiator XCC1702 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XCC1703 PF02542 YgbB family XCC1704 PF01142 tRNA pseudouridine synthase D (TruD) XCC1705 PF01713 Smr domain XCC1706 PF01975 Survival protein SurE XCC1708 PF09335 SNARE associated Golgi protein XCC1709 PF01476 LysM domain XCC1709 PF01551 Peptidase family M23 XCC1710 PF04430 Protein of unknown function (DUF498/DUF598) XCC1711 PF01985 CRS1 / YhbY (CRM) domain XCC1712 PF01728 FtsJ-like methyltransferase XCC1713 PF01434 Peptidase family M41 XCC1713 PF00004 ATPase family associated with various cellular activities (AAA) XCC1713 PF06480 FtsH Extracellular XCC1713 PF17862 AAA+ lid domain XCC1714 PF00809 Pterin binding enzyme XCC1716 PF17209 Hfq protein XCC1717 PF01926 50S ribosome-binding GTPase XCC1717 PF16360 GTP-binding GTPase Middle Region XCC1717 PF13167 GTP-binding GTPase N-terminal XCC1718 PF02464 Competence-damaged protein XCC1719 PF00593 TonB dependent receptor XCC1719 PF07715 TonB-dependent Receptor Plug Domain XCC1720 PF03109 ABC1 family XCC1721 PF00717 Peptidase S24-like XCC1721 PF01726 LexA DNA binding domain XCC1722 PF00154 recA bacterial DNA recombination protein XCC1723 PF02631 RecX family XCC1724 PF01411 tRNA synthetases class II (A) XCC1724 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XCC1724 PF02272 DHHA1 domain XCC1725 PF02599 Global regulator protein family XCC1727 PF08447 PAS fold XCC1727 PF13426 PAS domain XCC1727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1728 PF17954 Quercetinase C-terminal cupin domain XCC1728 PF02678 Pirin XCC1729 PF17954 Quercetinase C-terminal cupin domain XCC1729 PF02678 Pirin XCC1730 PF03466 LysR substrate binding domain XCC1730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC1735 PF08543 Phosphomethylpyrimidine kinase XCC1735 PF02581 Thiamine monophosphate synthase XCC1737 PF02562 PhoH-like protein XCC1737 PF13638 PIN domain XCC1738 PF00578 AhpC/TSA family XCC1741 PF00701 Dihydrodipicolinate synthetase family XCC1743 PF00037 4Fe-4S binding domain XCC1743 PF11953 Domain of unknown function (DUF3470) XCC1744 PF05035 2-keto-3-deoxy-galactonokinase XCC1745 PF08450 SMP-30/Gluconolactonase/LRE-like region XCC1746 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCC1746 PF13378 Enolase C-terminal domain-like XCC1747 PF01081 KDPG and KHG aldolase XCC1748 PF03466 LysR substrate binding domain XCC1748 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC1752 PF03442 Carbohydrate binding domain X2 XCC1752 PF00942 Cellulose binding domain XCC1755 PF16338 Domain of unknown function (DUF4968) XCC1755 PF01055 Glycosyl hydrolases family 31 XCC1755 PF17137 Domain of unknown function (DUF5110) XCC1757 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XCC1757 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XCC1759 PF00083 Sugar (and other) transporter XCC1763 PF01520 N-acetylmuramoyl-L-alanine amidase XCC1764 PF02649 Type I GTP cyclohydrolase folE2 XCC1766 PF12626 Polymerase A arginine-rich C-terminus XCC1766 PF12627 Probable RNA and SrmB- binding site of polymerase A XCC1766 PF01743 Poly A polymerase head domain XCC1767 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XCC1768 PF02548 Ketopantoate hydroxymethyltransferase XCC1769 PF02569 Pantoate-beta-alanine ligase XCC1770 PF02261 Aspartate decarboxylase XCC1771 PF00342 Phosphoglucose isomerase XCC1775 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCC1775 PF14310 Fibronectin type III-like domain XCC1775 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC1776 PF00474 Sodium:solute symporter family XCC1777 PF01590 GAF domain XCC1777 PF00563 EAL domain XCC1777 PF00360 Phytochrome region XCC1777 PF00990 Diguanylate cyclase, GGDEF domain XCC1778 PF02013 Cellulose or protein binding domain XCC1778 PF00150 Cellulase (glycosyl hydrolase family 5) XCC1779 PF00072 Response regulator receiver domain XCC1781 PF04551 GcpE protein XCC1782 PF01569 PAP2 superfamily XCC1783 PF08946 Osmosensory transporter coiled coil XCC1783 PF00083 Sugar (and other) transporter XCC1784 PF08946 Osmosensory transporter coiled coil XCC1784 PF00083 Sugar (and other) transporter XCC1785 PF01177 Asp/Glu/Hydantoin racemase XCC1786 PF00892 EamA-like transporter family XCC1787 PF01565 FAD binding domain XCC1787 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XCC1788 PF01180 Dihydroorotate dehydrogenase XCC1791 PF00171 Aldehyde dehydrogenase family XCC1793 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XCC1793 PF17287 POTRA domain XCC1793 PF08479 POTRA domain, ShlB-type XCC1794 PF05860 haemagglutination activity domain XCC1794 PF13332 Hemagglutinin repeat XCC1794 PF04829 Pre-toxin domain with VENN motif XCC1795 PF13683 Integrase core domain XCC1795 PF13276 HTH-like domain XCC1796 PF01527 Transposase XCC1797 PF05598 Transposase domain (DUF772) XCC1799 PF03073 TspO/MBR family XCC1800 PF13840 ACT domain XCC1800 PF00742 Homoserine dehydrogenase XCC1800 PF03447 Homoserine dehydrogenase, NAD binding domain XCC1800 PF01842 ACT domain XCC1800 PF00696 Amino acid kinase family XCC1801 PF00288 GHMP kinases N terminal domain XCC1801 PF08544 GHMP kinases C terminal XCC1803 PF00291 Pyridoxal-phosphate dependent enzyme XCC1803 PF14821 Threonine synthase N terminus XCC1805 PF13545 Crp-like helix-turn-helix domain XCC1805 PF00027 Cyclic nucleotide-binding domain XCC1806 PF03129 Anticodon binding domain XCC1806 PF13393 Histidyl-tRNA synthetase XCC1808 PF01634 ATP phosphoribosyltransferase XCC1808 PF08029 HisG, C-terminal domain XCC1809 PF00815 Histidinol dehydrogenase XCC1810 PF00155 Aminotransferase class I and II XCC1811 PF00475 Imidazoleglycerol-phosphate dehydratase XCC1812 PF00117 Glutamine amidotransferase class-I XCC1813 PF00977 Histidine biosynthesis protein XCC1814 PF00977 Histidine biosynthesis protein XCC1815 PF01502 Phosphoribosyl-AMP cyclohydrolase XCC1815 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XCC1819 PF03079 ARD/ARD' family XCC1820 PF00596 Class II Aldolase and Adducin N-terminal domain XCC1821 PF13520 Amino acid permease XCC1822 PF13520 Amino acid permease XCC1825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCC1825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCC1826 PF01565 FAD binding domain XCC1826 PF02913 FAD linked oxidases, C-terminal domain XCC1830 PF01132 Elongation factor P (EF-P) OB domain XCC1830 PF08207 Elongation factor P (EF-P) KOW-like domain XCC1830 PF09285 Elongation factor P, C-terminal XCC1831 PF00106 short chain dehydrogenase XCC1832 PF00682 HMGL-like XCC1833 PF00378 Enoyl-CoA hydratase/isomerase XCC1835 PF07664 Ferrous iron transport protein B C terminus XCC1835 PF07670 Nucleoside recognition XCC1835 PF02421 Ferrous iron transport protein B XCC1838 PF00155 Aminotransferase class I and II XCC1839 PF03473 MOSC domain XCC1839 PF03475 3-alpha domain XCC1840 PF05173 Dihydrodipicolinate reductase, C-terminus XCC1840 PF01113 Dihydrodipicolinate reductase, N-terminus XCC1841 PF00117 Glutamine amidotransferase class-I XCC1841 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XCC1843 PF02142 MGS-like domain XCC1843 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XCC1843 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XCC1844 PF03449 Transcription elongation factor, N-terminal XCC1844 PF01272 Transcription elongation factor, GreA/GreB, C-term XCC1846 PF17768 RecJ OB domain XCC1846 PF02272 DHHA1 domain XCC1846 PF01368 DHH family XCC1851 PF04397 LytTr DNA-binding domain XCC1851 PF00072 Response regulator receiver domain XCC1852 PF00472 RF-1 domain XCC1852 PF03462 PCRF domain XCC1853 PF00152 tRNA synthetases class II (D, K and N) XCC1853 PF01336 OB-fold nucleic acid binding domain XCC1854 PF00072 Response regulator receiver domain XCC1855 PF00512 His Kinase A (phospho-acceptor) domain XCC1855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1855 PF01627 Hpt domain XCC1855 PF00072 Response regulator receiver domain XCC1856 PF01627 Hpt domain XCC1856 PF00512 His Kinase A (phospho-acceptor) domain XCC1856 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1856 PF00072 Response regulator receiver domain XCC1857 PF00378 Enoyl-CoA hydratase/isomerase XCC1858 PF13193 AMP-binding enzyme C-terminal domain XCC1858 PF00501 AMP-binding enzyme XCC1860 PF00330 Aconitase family (aconitate hydratase) XCC1860 PF00694 Aconitase C-terminal domain XCC1863 PF06434 Aconitate hydratase 2 N-terminus XCC1863 PF11791 Aconitate B N-terminal domain XCC1863 PF00330 Aconitase family (aconitate hydratase) XCC1864 PF00561 alpha/beta hydrolase fold XCC1865 PF03707 Bacterial signalling protein N terminal repeat XCC1865 PF00563 EAL domain XCC1865 PF00990 Diguanylate cyclase, GGDEF domain XCC1866 PF01339 CheB methylesterase XCC1866 PF00072 Response regulator receiver domain XCC1867 PF03975 CheD chemotactic sensory transduction XCC1868 PF03705 CheR methyltransferase, all-alpha domain XCC1868 PF01739 CheR methyltransferase, SAM binding domain XCC1869 PF02203 Tar ligand binding domain homologue XCC1869 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1869 PF00672 HAMP domain XCC1871 PF01584 CheW-like domain XCC1872 PF07238 PilZ domain XCC1872 PF07317 Flagellar regulator YcgR XCC1873 PF02203 Tar ligand binding domain homologue XCC1873 PF00672 HAMP domain XCC1873 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1875 PF02203 Tar ligand binding domain homologue XCC1875 PF00672 HAMP domain XCC1875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1876 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1876 PF00672 HAMP domain XCC1876 PF02203 Tar ligand binding domain homologue XCC1878 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1878 PF02203 Tar ligand binding domain homologue XCC1878 PF00672 HAMP domain XCC1879 PF00672 HAMP domain XCC1879 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1879 PF02203 Tar ligand binding domain homologue XCC1880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1880 PF00672 HAMP domain XCC1880 PF02203 Tar ligand binding domain homologue XCC1881 PF02203 Tar ligand binding domain homologue XCC1881 PF00672 HAMP domain XCC1881 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1884 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1884 PF00672 HAMP domain XCC1884 PF02203 Tar ligand binding domain homologue XCC1885 PF01584 CheW-like domain XCC1885 PF02895 Signal transducing histidine kinase, homodimeric domain XCC1885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1885 PF09078 CheY binding XCC1885 PF01627 Hpt domain XCC1886 PF00072 Response regulator receiver domain XCC1888 PF01584 CheW-like domain XCC1889 PF13614 AAA domain XCC1890 PF13677 Membrane MotB of proton-channel complex MotA/MotB XCC1890 PF00691 OmpA family XCC1891 PF01618 MotA/TolQ/ExbB proton channel family XCC1903 PF01627 Hpt domain XCC1903 PF02895 Signal transducing histidine kinase, homodimeric domain XCC1903 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1903 PF00072 Response regulator receiver domain XCC1903 PF01584 CheW-like domain XCC1904 PF04344 Chemotaxis phosphatase, CheZ XCC1905 PF00072 Response regulator receiver domain XCC1906 PF04542 Sigma-70 region 2 XCC1906 PF04545 Sigma-70, region 4 XCC1906 PF04539 Sigma-70 region 3 XCC1907 PF10609 NUBPL iron-transfer P-loop NTPase XCC1908 PF00448 SRP54-type protein, GTPase domain XCC1909 PF00771 FHIPEP family XCC1910 PF01312 FlhB HrpN YscU SpaS Family XCC1911 PF00990 Diguanylate cyclase, GGDEF domain XCC1911 PF00563 EAL domain XCC1911 PF03707 Bacterial signalling protein N terminal repeat XCC1912 PF00990 Diguanylate cyclase, GGDEF domain XCC1913 PF00990 Diguanylate cyclase, GGDEF domain XCC1914 PF01311 Bacterial export proteins, family 1 XCC1915 PF01313 Bacterial export proteins, family 3 XCC1916 PF00813 FliP family XCC1917 PF04347 Flagellar biosynthesis protein, FliO XCC1918 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XCC1919 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XCC1919 PF02154 Flagellar motor switch protein FliM XCC1923 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCC1923 PF18269 T3SS EscN ATPase C-terminal domain XCC1925 PF01706 FliG C-terminal domain XCC1925 PF14842 FliG N-terminal domain XCC1925 PF14841 FliG middle domain XCC1926 PF08345 Flagellar M-ring protein C-terminal XCC1926 PF01514 Secretory protein of YscJ/FliF family XCC1927 PF02049 Flagellar hook-basal body complex protein FliE XCC1928 PF00535 Glycosyl transferase family 2 XCC1932 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XCC1933 PF06490 Flagellar regulatory protein FleQ XCC1933 PF00158 Sigma-54 interaction domain XCC1933 PF02954 Bacterial regulatory protein, Fis family XCC1934 PF01339 CheB methylesterase XCC1934 PF00072 Response regulator receiver domain XCC1935 PF00309 Sigma-54 factor, Activator interacting domain (AID) XCC1935 PF04552 Sigma-54, DNA binding domain XCC1935 PF04963 Sigma-54 factor, core binding domain XCC1936 PF00196 Bacterial regulatory proteins, luxR family XCC1936 PF00072 Response regulator receiver domain XCC1939 PF02561 Flagellar protein FliS XCC1940 PF07195 Flagellar hook-associated protein 2 C-terminus XCC1940 PF02465 Flagellar hook-associated protein 2 N-terminus XCC1940 PF07196 Flagellin hook IN motif XCC1941 PF00700 Bacterial flagellin C-terminal helical region XCC1941 PF00669 Bacterial flagellin N-terminal helical region XCC1942 PF00669 Bacterial flagellin N-terminal helical region XCC1943 PF07196 Flagellin hook IN motif XCC1943 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCC1944 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XCC1944 PF10135 Rod binding protein XCC1945 PF02119 Flagellar P-ring protein XCC1946 PF02107 Flagellar L-ring protein XCC1947 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCC1947 PF00460 Flagella basal body rod protein XCC1948 PF00460 Flagella basal body rod protein XCC1948 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCC1949 PF07559 Flagellar basal body protein FlaE XCC1949 PF00460 Flagella basal body rod protein XCC1949 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCC1950 PF03963 Flagellar hook capping protein - N-terminal region XCC1951 PF00460 Flagella basal body rod protein XCC1951 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XCC1953 PF00072 Response regulator receiver domain XCC1953 PF01584 CheW-like domain XCC1957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1957 PF00512 His Kinase A (phospho-acceptor) domain XCC1958 PF00563 EAL domain XCC1958 PF00990 Diguanylate cyclase, GGDEF domain XCC1958 PF03707 Bacterial signalling protein N terminal repeat XCC1959 PF00563 EAL domain XCC1959 PF00990 Diguanylate cyclase, GGDEF domain XCC1959 PF03707 Bacterial signalling protein N terminal repeat XCC1960 PF07730 Histidine kinase XCC1960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC1962 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC1962 PF00672 HAMP domain XCC1962 PF12729 Four helix bundle sensory module for signal transduction XCC1963 PF04356 Protein of unknown function (DUF489) XCC1965 PF00293 NUDIX domain XCC1966 PF02617 ATP-dependent Clp protease adaptor protein ClpS XCC1967 PF10431 C-terminal, D2-small domain, of ClpB protein XCC1967 PF02861 Clp amino terminal domain, pathogenicity island component XCC1967 PF17871 AAA lid domain XCC1967 PF07724 AAA domain (Cdc48 subfamily) XCC1967 PF00004 ATPase family associated with various cellular activities (AAA) XCC1968 PF01176 Translation initiation factor 1A / IF-1 XCC1969 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XCC1971 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC1972 PF01580 FtsK/SpoIIIE family XCC1972 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XCC1972 PF09397 Ftsk gamma domain XCC1972 PF17854 FtsK alpha domain XCC1974 PF03548 Outer membrane lipoprotein carrier protein LolA XCC1976 PF12002 MgsA AAA+ ATPase C terminal XCC1976 PF16193 AAA C-terminal domain XCC1976 PF00004 ATPase family associated with various cellular activities (AAA) XCC1977 PF00654 Voltage gated chloride channel XCC1978 PF00108 Thiolase, N-terminal domain XCC1978 PF02803 Thiolase, C-terminal domain XCC1979 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XCC1979 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XCC1979 PF00378 Enoyl-CoA hydratase/isomerase XCC1981 PF00334 Nucleoside diphosphate kinase XCC1982 PF04055 Radical SAM superfamily XCC1984 PF13464 Domain of unknown function (DUF4115) XCC1986 PF13360 PQQ-like domain XCC1986 PF01011 PQQ enzyme repeat XCC1987 PF01926 50S ribosome-binding GTPase XCC1987 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XCC1988 PF03454 MoeA C-terminal region (domain IV) XCC1988 PF00994 Probable molybdopterin binding domain XCC1988 PF03453 MoeA N-terminal region (domain I and II) XCC1989 PF00899 ThiF family XCC1992 PF00106 short chain dehydrogenase XCC1993 PF00067 Cytochrome P450 XCC1996 PF08240 Alcohol dehydrogenase GroES-like domain XCC1996 PF00107 Zinc-binding dehydrogenase XCC1996 PF13823 Alcohol dehydrogenase GroES-associated XCC1998 PF03372 Endonuclease/Exonuclease/phosphatase family XCC2000 PF03454 MoeA C-terminal region (domain IV) XCC2000 PF00994 Probable molybdopterin binding domain XCC2000 PF03453 MoeA N-terminal region (domain I and II) XCC2001 PF12804 MobA-like NTP transferase domain XCC2003 PF10414 Sirohaem synthase dimerisation region XCC2003 PF14824 Sirohaem biosynthesis protein central XCC2003 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCC2004 PF00072 Response regulator receiver domain XCC2004 PF03861 ANTAR domain XCC2006 PF07690 Major Facilitator Superfamily XCC2007 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC2007 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XCC2007 PF18267 Rubredoxin NAD+ reductase C-terminal domain XCC2007 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XCC2007 PF04324 BFD-like [2Fe-2S] binding domain XCC2008 PF11723 Homotrimeric ring hydroxylase XCC2008 PF00355 Rieske [2Fe-2S] domain XCC2009 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XCC2009 PF00384 Molybdopterin oxidoreductase XCC2009 PF04324 BFD-like [2Fe-2S] binding domain XCC2009 PF01568 Molydopterin dinucleotide binding domain XCC2010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCC2013 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XCC2015 PF00483 Nucleotidyl transferase XCC2017 PF01266 FAD dependent oxidoreductase XCC2020 PF05974 Domain of unknown function (DUF892) XCC2021 PF01339 CheB methylesterase XCC2021 PF00072 Response regulator receiver domain XCC2023 PF00563 EAL domain XCC2023 PF08447 PAS fold XCC2023 PF08448 PAS fold XCC2023 PF00990 Diguanylate cyclase, GGDEF domain XCC2024 PF12951 Passenger-associated-transport-repeat XCC2024 PF12951 Passenger-associated-transport-repeat XCC2025 PF00082 Subtilase family XCC2025 PF03797 Autotransporter beta-domain XCC2026 PF00561 alpha/beta hydrolase fold XCC2030 PF00512 His Kinase A (phospho-acceptor) domain XCC2030 PF08446 PAS fold XCC2030 PF00360 Phytochrome region XCC2030 PF01590 GAF domain XCC2030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2032 PF07995 Glucose / Sorbosone dehydrogenase XCC2033 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCC2035 PF01431 Peptidase family M13 XCC2035 PF05649 Peptidase family M13 XCC2038 PF02630 SCO1/SenC XCC2041 PF01638 HxlR-like helix-turn-helix XCC2045 PF09335 SNARE associated Golgi protein XCC2046 PF00593 TonB dependent receptor XCC2046 PF07660 Secretin and TonB N terminus short domain XCC2046 PF07715 TonB-dependent Receptor Plug Domain XCC2047 PF02203 Tar ligand binding domain homologue XCC2047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC2047 PF00672 HAMP domain XCC2053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2053 PF00072 Response regulator receiver domain XCC2053 PF13426 PAS domain XCC2054 PF08448 PAS fold XCC2054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2054 PF00512 His Kinase A (phospho-acceptor) domain XCC2054 PF13188 PAS domain XCC2054 PF00072 Response regulator receiver domain XCC2055 PF06165 Glycosyltransferase family 36 XCC2055 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XCC2055 PF10091 Putative glucoamylase XCC2059 PF02303 Helix-destabilising protein XCC2061 PF17091 Inovirus G7P protein XCC2072 PF17091 Inovirus G7P protein XCC2074 PF02303 Helix-destabilising protein XCC2079 PF01106 NifU-like domain XCC2080 PF01329 Pterin 4 alpha carbinolamine dehydratase XCC2082 PF02535 ZIP Zinc transporter XCC2083 PF01479 S4 domain XCC2083 PF00849 RNA pseudouridylate synthase XCC2084 PF00575 S1 RNA binding domain XCC2084 PF10150 Ribonuclease E/G family XCC2084 PF12111 Polyribonucleotide phosphorylase C terminal XCC2085 PF00196 Bacterial regulatory proteins, luxR family XCC2085 PF00072 Response regulator receiver domain XCC2086 PF17773 UPF0176 acylphosphatase like domain XCC2086 PF00581 Rhodanese-like domain XCC2088 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCC2089 PF01593 Flavin containing amine oxidoreductase XCC2090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XCC2090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XCC2090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XCC2092 PF04055 Radical SAM superfamily XCC2092 PF06969 HemN C-terminal domain XCC2094 PF07519 Tannase and feruloyl esterase XCC2095 PF13087 AAA domain XCC2095 PF13195 Protein of unknown function (DUF4011) XCC2095 PF13195 Protein of unknown function (DUF4011) XCC2095 PF13086 AAA domain XCC2095 PF13086 AAA domain XCC2095 PF13087 AAA domain XCC2097 PF13700 Domain of unknown function (DUF4158) XCC2097 PF01526 Tn3 transposase DDE domain XCC2098 PF13276 HTH-like domain XCC2098 PF13683 Integrase core domain XCC2102 PF10544 T5orf172 domain XCC2105 PF05598 Transposase domain (DUF772) XCC2109 PF05394 Avirulence protein XCC2110 PF00589 Phage integrase family XCC2110 PF13356 Arm DNA-binding domain XCC2114 PF01066 CDP-alcohol phosphatidyltransferase XCC2115 PF02151 UvrB/uvrC motif XCC2115 PF08459 UvrC Helix-hairpin-helix N-terminal XCC2115 PF01541 GIY-YIG catalytic domain XCC2117 PF01451 Low molecular weight phosphotyrosine protein phosphatase XCC2118 PF02348 Cytidylyltransferase XCC2119 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XCC2120 PF00664 ABC transporter transmembrane region XCC2120 PF00005 ABC transporter XCC2122 PF01618 MotA/TolQ/ExbB proton channel family XCC2123 PF03772 Competence protein XCC2123 PF00753 Metallo-beta-lactamase superfamily XCC2125 PF00005 ABC transporter XCC2126 PF02687 FtsX-like permease family XCC2126 PF12704 MacB-like periplasmic core domain XCC2128 PF03937 Flavinator of succinate dehydrogenase XCC2129 PF13085 2Fe-2S iron-sulfur cluster binding domain XCC2130 PF00890 FAD binding domain XCC2130 PF02910 Fumarate reductase flavoprotein C-term XCC2131 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XCC2132 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XCC2133 PF01571 Aminomethyltransferase folate-binding domain XCC2135 PF00005 ABC transporter XCC2135 PF17912 MalK OB fold domain XCC2136 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XCC2136 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XCC2137 PF02685 Glucokinase XCC2138 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XCC2139 PF00920 Dehydratase family XCC2140 PF01081 KDPG and KHG aldolase XCC2141 PF00873 AcrB/AcrD/AcrF family XCC2142 PF00873 AcrB/AcrD/AcrF family XCC2143 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC2145 PF00034 Cytochrome c XCC2153 PF08447 PAS fold XCC2153 PF00563 EAL domain XCC2153 PF08448 PAS fold XCC2153 PF00990 Diguanylate cyclase, GGDEF domain XCC2154 PF16921 Tex protein YqgF-like domain XCC2154 PF09371 Tex-like protein N-terminal domain XCC2154 PF00575 S1 RNA binding domain XCC2154 PF17674 HHH domain XCC2156 PF01266 FAD dependent oxidoreductase XCC2156 PF00355 Rieske [2Fe-2S] domain XCC2159 PF00561 alpha/beta hydrolase fold XCC2161 PF01066 CDP-alcohol phosphatidyltransferase XCC2165 PF03618 Kinase/pyrophosphorylase XCC2166 PF00391 PEP-utilising enzyme, mobile domain XCC2166 PF02896 PEP-utilising enzyme, TIM barrel domain XCC2166 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XCC2167 PF00924 Mechanosensitive ion channel XCC2167 PF05552 Conserved TM helix XCC2168 PF00929 Exonuclease XCC2169 PF14437 MafB19-like deaminase XCC2170 PF01325 Iron dependent repressor, N-terminal DNA binding domain XCC2170 PF02742 Iron dependent repressor, metal binding and dimerisation domain XCC2171 PF01566 Natural resistance-associated macrophage protein XCC2172 PF00561 alpha/beta hydrolase fold XCC2174 PF05977 Transmembrane secretion effector XCC2175 PF07969 Amidohydrolase family XCC2177 PF00857 Isochorismatase family XCC2179 PF13185 GAF domain XCC2179 PF13492 GAF domain XCC2179 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2179 PF07730 Histidine kinase XCC2180 PF00196 Bacterial regulatory proteins, luxR family XCC2180 PF00072 Response regulator receiver domain XCC2183 PF00958 GMP synthase C terminal domain XCC2183 PF00117 Glutamine amidotransferase class-I XCC2183 PF02540 NAD synthase XCC2184 PF00478 IMP dehydrogenase / GMP reductase domain XCC2184 PF00571 CBS domain XCC2185 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XCC2185 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XCC2187 PF00999 Sodium/hydrogen exchanger family XCC2187 PF02254 TrkA-N domain XCC2188 PF00483 Nucleotidyl transferase XCC2189 PF02719 Polysaccharide biosynthesis protein XCC2190 PF00953 Glycosyl transferase family 4 XCC2191 PF18073 Rubredoxin metal binding domain XCC2193 PF00216 Bacterial DNA-binding protein XCC2194 PF00575 S1 RNA binding domain XCC2195 PF02224 Cytidylate kinase XCC2196 PF00444 Ribosomal protein L36 XCC2198 PF04371 Porphyromonas-type peptidyl-arginine deiminase XCC2199 PF00795 Carbon-nitrogen hydrolase XCC2204 PF00528 Binding-protein-dependent transport system inner membrane component XCC2205 PF00528 Binding-protein-dependent transport system inner membrane component XCC2206 PF13416 Bacterial extracellular solute-binding protein XCC2209 PF00356 Bacterial regulatory proteins, lacI family XCC2211 PF03795 YCII-related domain XCC2212 PF02616 Segregation and condensation protein ScpA XCC2213 PF04079 Segregation and condensation complex subunit ScpB XCC2214 PF01479 S4 domain XCC2214 PF00849 RNA pseudouridylate synthase XCC2217 PF00795 Carbon-nitrogen hydrolase XCC2218 PF00155 Aminotransferase class I and II XCC2219 PF00005 ABC transporter XCC2220 PF03379 CcmB protein XCC2221 PF01578 Cytochrome C assembly protein XCC2223 PF03100 CcmE XCC2224 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XCC2224 PF01578 Cytochrome C assembly protein XCC2225 PF08534 Redoxin XCC2226 PF03918 Cytochrome C biogenesis protein XCC2228 PF00561 alpha/beta hydrolase fold XCC2230 PF00005 ABC transporter XCC2230 PF00664 ABC transporter transmembrane region XCC2231 PF00664 ABC transporter transmembrane region XCC2231 PF00005 ABC transporter XCC2232 PF01654 Cytochrome bd terminal oxidase subunit I XCC2233 PF02322 Cytochrome bd terminal oxidase subunit II XCC2237 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XCC2237 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCC2238 PF00171 Aldehyde dehydrogenase family XCC2239 PF01472 PUA domain XCC2239 PF00696 Amino acid kinase family XCC2242 PF00206 Lyase XCC2243 PF01118 Semialdehyde dehydrogenase, NAD binding domain XCC2245 PF00696 Amino acid kinase family XCC2245 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase XCC2246 PF01546 Peptidase family M20/M25/M40 XCC2246 PF07687 Peptidase dimerisation domain XCC2247 PF00764 Arginosuccinate synthase XCC2249 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XCC2249 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XCC2251 PF01406 tRNA synthetases class I (C) catalytic domain XCC2251 PF09190 DALR domain XCC2252 PF02657 Fe-S metabolism associated domain XCC2253 PF07690 Major Facilitator Superfamily XCC2255 PF01258 Prokaryotic dksA/traR C4-type zinc finger XCC2256 PF01809 Putative membrane protein insertion efficiency factor XCC2257 PF01979 Amidohydrolase family XCC2258 PF01551 Peptidase family M23 XCC2258 PF08460 Bacterial SH3 domain XCC2260 PF06751 Ethanolamine ammonia lyase large subunit (EutB) XCC2261 PF05985 Ethanolamine ammonia-lyase light chain (EutC) XCC2263 PF00753 Metallo-beta-lactamase superfamily XCC2265 PF01095 Pectinesterase XCC2266 PF00295 Glycosyl hydrolases family 28 XCC2268 PF13419 Haloacid dehalogenase-like hydrolase XCC2270 PF01979 Amidohydrolase family XCC2272 PF01132 Elongation factor P (EF-P) OB domain XCC2272 PF08207 Elongation factor P (EF-P) KOW-like domain XCC2272 PF09285 Elongation factor P, C-terminal XCC2273 PF04055 Radical SAM superfamily XCC2274 PF13188 PAS domain XCC2274 PF00990 Diguanylate cyclase, GGDEF domain XCC2274 PF00563 EAL domain XCC2274 PF03707 Bacterial signalling protein N terminal repeat XCC2276 PF00588 SpoU rRNA Methylase family XCC2277 PF00459 Inositol monophosphatase family XCC2278 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XCC2278 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XCC2279 PF00545 ribonuclease XCC2281 PF16326 ABC transporter C-terminal domain XCC2281 PF00005 ABC transporter XCC2281 PF12848 ABC transporter XCC2282 PF03880 DbpA RNA binding domain XCC2282 PF00270 DEAD/DEAH box helicase XCC2282 PF00271 Helicase conserved C-terminal domain XCC2283 PF00156 Phosphoribosyl transferase domain XCC2284 PF02696 Uncharacterized ACR, YdiU/UPF0061 family XCC2285 PF07859 alpha/beta hydrolase fold XCC2287 PF00313 'Cold-shock' DNA-binding domain XCC2288 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 XCC2289 PF07152 YaeQ protein XCC2291 PF03707 Bacterial signalling protein N terminal repeat XCC2291 PF00563 EAL domain XCC2291 PF00990 Diguanylate cyclase, GGDEF domain XCC2292 PF01435 Peptidase family M48 XCC2293 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCC2294 PF00106 short chain dehydrogenase XCC2295 PF07879 PHB/PHA accumulation regulator DNA-binding domain XCC2295 PF05233 PHB accumulation regulatory domain XCC2298 PF08676 MutL C terminal dimerisation domain XCC2298 PF01119 DNA mismatch repair protein, C-terminal domain XCC2299 PF11741 AMIN domain XCC2299 PF01520 N-acetylmuramoyl-L-alanine amidase XCC2301 PF01256 Carbohydrate kinase XCC2301 PF03853 YjeF-related protein N-terminus XCC2302 PF08331 Domain of unknown function (DUF1730) XCC2303 PF13742 OB-fold nucleic acid binding domain XCC2303 PF02601 Exonuclease VII, large subunit XCC2305 PF03781 Sulfatase-modifying factor enzyme 1 XCC2306 PF01612 3'-5' exonuclease XCC2306 PF00570 HRDC domain XCC2307 PF13298 DNA polymerase Ligase (LigD) XCC2307 PF04679 ATP dependent DNA ligase C terminal region XCC2307 PF01068 ATP dependent DNA ligase domain XCC2314 PF01584 CheW-like domain XCC2315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC2315 PF12729 Four helix bundle sensory module for signal transduction XCC2315 PF00672 HAMP domain XCC2316 PF02245 Methylpurine-DNA glycosylase (MPG) XCC2317 PF00271 Helicase conserved C-terminal domain XCC2317 PF00270 DEAD/DEAH box helicase XCC2317 PF08494 DEAD/H associated XCC2320 PF04386 Stringent starvation protein B XCC2321 PF00043 Glutathione S-transferase, C-terminal domain XCC2321 PF02798 Glutathione S-transferase, N-terminal domain XCC2322 PF02167 Cytochrome C1 family XCC2323 PF00033 Cytochrome b/b6/petB XCC2323 PF00032 Cytochrome b(C-terminal)/b6/petD XCC2324 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XCC2324 PF00355 Rieske [2Fe-2S] domain XCC2325 PF01464 Transglycosylase SLT domain XCC2327 PF14497 Glutathione S-transferase, C-terminal domain XCC2327 PF02798 Glutathione S-transferase, N-terminal domain XCC2328 PF00919 Uncharacterized protein family UPF0004 XCC2328 PF01938 TRAM domain XCC2328 PF04055 Radical SAM superfamily XCC2329 PF02562 PhoH-like protein XCC2331 PF02130 Uncharacterized protein family UPF0054 XCC2333 PF03471 Transporter associated domain XCC2333 PF00571 CBS domain XCC2336 PF00171 Aldehyde dehydrogenase family XCC2338 PF00528 Binding-protein-dependent transport system inner membrane component XCC2339 PF00528 Binding-protein-dependent transport system inner membrane component XCC2340 PF00005 ABC transporter XCC2340 PF08402 TOBE domain XCC2341 PF02321 Outer membrane efflux protein XCC2342 PF07690 Major Facilitator Superfamily XCC2343 PF13533 Biotin-lipoyl like XCC2344 PF13416 Bacterial extracellular solute-binding protein XCC2345 PF00202 Aminotransferase class-III XCC2346 PF00120 Glutamine synthetase, catalytic domain XCC2347 PF07722 Peptidase C26 XCC2348 PF00120 Glutamine synthetase, catalytic domain XCC2349 PF01266 FAD dependent oxidoreductase XCC2350 PF00072 Response regulator receiver domain XCC2350 PF00990 Diguanylate cyclase, GGDEF domain XCC2351 PF01814 Hemerythrin HHE cation binding domain XCC2352 PF07690 Major Facilitator Superfamily XCC2352 PF00083 Sugar (and other) transporter XCC2354 PF00384 Molybdopterin oxidoreductase XCC2355 PF02634 FdhD/NarQ family XCC2356 PF07690 Major Facilitator Superfamily XCC2357 PF00202 Aminotransferase class-III XCC2359 PF04286 Protein of unknown function (DUF445) XCC2360 PF00072 Response regulator receiver domain XCC2360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XCC2360 PF01627 Hpt domain XCC2360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2360 PF00672 HAMP domain XCC2360 PF00512 His Kinase A (phospho-acceptor) domain XCC2361 PF00072 Response regulator receiver domain XCC2362 PF07690 Major Facilitator Superfamily XCC2363 PF00857 Isochorismatase family XCC2364 PF12833 Helix-turn-helix domain XCC2365 PF05088 Bacterial NAD-glutamate dehydrogenase XCC2367 PF00529 HlyD membrane-fusion protein of T1SS XCC2367 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC2368 PF00873 AcrB/AcrD/AcrF family XCC2369 PF00356 Bacterial regulatory proteins, lacI family XCC2370 PF05524 PEP-utilising enzyme, N-terminal XCC2370 PF00391 PEP-utilising enzyme, mobile domain XCC2370 PF02896 PEP-utilising enzyme, TIM barrel domain XCC2370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XCC2370 PF00381 PTS HPr component phosphorylation site XCC2371 PF00294 pfkB family carbohydrate kinase XCC2372 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XCC2375 PF07549 SecD/SecF GG Motif XCC2375 PF02355 Protein export membrane protein XCC2376 PF07549 SecD/SecF GG Motif XCC2376 PF13721 SecD export protein N-terminal TM region XCC2376 PF02355 Protein export membrane protein XCC2377 PF02699 Preprotein translocase subunit XCC2378 PF01702 Queuine tRNA-ribosyltransferase XCC2379 PF02547 Queuosine biosynthesis protein XCC2381 PF00202 Aminotransferase class-III XCC2387 PF02927 Cellulase N-terminal ig-like domain XCC2387 PF00759 Glycosyl hydrolase family 9 XCC2389 PF00037 4Fe-4S binding domain XCC2391 PF01467 Cytidylyltransferase-like XCC2393 PF00183 Hsp90 protein XCC2393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2395 PF07715 TonB-dependent Receptor Plug Domain XCC2395 PF00593 TonB dependent receptor XCC2397 PF00326 Prolyl oligopeptidase family XCC2397 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCC2398 PF04616 Glycosyl hydrolases family 43 XCC2399 PF07532 Bacterial Ig-like domain (group 4) XCC2400 PF07715 TonB-dependent Receptor Plug Domain XCC2400 PF00593 TonB dependent receptor XCC2406 PF13520 Amino acid permease XCC2409 PF01321 Creatinase/Prolidase N-terminal domain XCC2409 PF00557 Metallopeptidase family M24 XCC2410 PF00171 Aldehyde dehydrogenase family XCC2411 PF00701 Dihydrodipicolinate synthetase family XCC2412 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC2412 PF04324 BFD-like [2Fe-2S] binding domain XCC2414 PF01266 FAD dependent oxidoreductase XCC2415 PF05544 Proline racemase XCC2417 PF00448 SRP54-type protein, GTPase domain XCC2417 PF02881 SRP54-type protein, helical bundle domain XCC2418 PF00730 HhH-GPD superfamily base excision DNA repair protein XCC2418 PF14815 NUDIX domain XCC2418 PF00633 Helix-hairpin-helix motif XCC2419 PF04362 Bacterial Fe(2+) trafficking XCC2421 PF00072 Response regulator receiver domain XCC2421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2421 PF13426 PAS domain XCC2422 PF00893 Small Multidrug Resistance protein XCC2426 PF00512 His Kinase A (phospho-acceptor) domain XCC2426 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2426 PF00072 Response regulator receiver domain XCC2426 PF13188 PAS domain XCC2426 PF08448 PAS fold XCC2432 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCC2432 PF12806 Acetyl-CoA dehydrogenase C-terminal like XCC2432 PF02770 Acyl-CoA dehydrogenase, middle domain XCC2432 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCC2434 PF02780 Transketolase, C-terminal domain XCC2434 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XCC2434 PF02779 Transketolase, pyrimidine binding domain XCC2438 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XCC2440 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XCC2440 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XCC2443 PF03808 Glycosyl transferase WecB/TagA/CpsF family XCC2446 PF01943 Polysaccharide biosynthesis protein XCC2448 PF13439 Glycosyltransferase Family 4 XCC2448 PF00534 Glycosyl transferases group 1 XCC2452 PF02397 Bacterial sugar transferase XCC2456 PF13411 MerR HTH family regulatory protein XCC2457 PF00216 Bacterial DNA-binding protein XCC2458 PF03147 Ferredoxin-fold anticodon binding domain XCC2458 PF03484 tRNA synthetase B5 domain XCC2458 PF03483 B3/4 domain XCC2458 PF01588 Putative tRNA binding domain XCC2458 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XCC2459 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XCC2459 PF01409 tRNA synthetases class II core domain (F) XCC2460 PF00453 Ribosomal protein L20 XCC2461 PF01632 Ribosomal protein L35 XCC2462 PF05198 Translation initiation factor IF-3, N-terminal domain XCC2462 PF00707 Translation initiation factor IF-3, C-terminal domain XCC2463 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XCC2463 PF03129 Anticodon binding domain XCC2463 PF02824 TGS domain XCC2463 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XCC2464 PF00356 Bacterial regulatory proteins, lacI family XCC2465 PF00128 Alpha amylase, catalytic domain XCC2465 PF00686 Starch binding domain XCC2466 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XCC2468 PF10566 Glycoside hydrolase 97 XCC2468 PF14508 Glycosyl-hydrolase 97 N-terminal XCC2468 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XCC2470 PF01609 Transposase DDE domain XCC2470 PF05598 Transposase domain (DUF772) XCC2471 PF00128 Alpha amylase, catalytic domain XCC2472 PF13276 HTH-like domain XCC2472 PF13683 Integrase core domain XCC2474 PF03135 CagE, TrbE, VirB family, component of type IV transporter system XCC2475 PF05101 Type IV secretory pathway, VirB3-like protein XCC2477 PF01464 Transglycosylase SLT domain XCC2478 PF00437 Type II/IV secretion system protein XCC2479 PF03743 Bacterial conjugation TrbI-like protein XCC2483 PF02534 Type IV secretory system Conjugative DNA transfer XCC2485 PF12344 Ultra-violet resistance protein B XCC2485 PF00271 Helicase conserved C-terminal domain XCC2485 PF17757 UvrB interaction domain XCC2485 PF04851 Type III restriction enzyme, res subunit XCC2485 PF02151 UvrB/uvrC motif XCC2486 PF07963 Prokaryotic N-terminal methylation motif XCC2486 PF00114 Pilin (bacterial filament) XCC2489 PF05567 Neisseria PilC beta-propeller domain XCC2490 PF05598 Transposase domain (DUF772) XCC2491 PF05567 Neisseria PilC beta-propeller domain XCC2495 PF07963 Prokaryotic N-terminal methylation motif XCC2496 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases XCC2496 PF11892 Domain of unknown function (DUF3412) XCC2496 PF03641 Possible lysine decarboxylase XCC2497 PF00593 TonB dependent receptor XCC2498 PF01914 MarC family integral membrane protein XCC2500 PF00462 Glutaredoxin XCC2501 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XCC2501 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XCC2502 PF02222 ATP-grasp domain XCC2502 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XCC2503 PF00731 AIR carboxylase XCC2505 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XCC2505 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XCC2507 PF03725 3' exoribonuclease family, domain 2 XCC2507 PF00575 S1 RNA binding domain XCC2507 PF00013 KH domain XCC2507 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XCC2507 PF01138 3' exoribonuclease family, domain 1 XCC2508 PF00312 Ribosomal protein S15 XCC2509 PF09157 Pseudouridine synthase II TruB, C-terminal XCC2509 PF16198 tRNA pseudouridylate synthase B C-terminal domain XCC2509 PF01509 TruB family pseudouridylate synthase (N terminal domain) XCC2510 PF02033 Ribosome-binding factor A XCC2511 PF11987 Translation-initiation factor 2 XCC2511 PF00009 Elongation factor Tu GTP binding domain XCC2511 PF04760 Translation initiation factor IF-2, N-terminal region XCC2511 PF08364 Bacterial translation initiation factor IF-2 associated region XCC2512 PF08529 NusA N-terminal domain XCC2512 PF13184 NusA-like KH domain XCC2512 PF00575 S1 RNA binding domain XCC2513 PF02576 RimP N-terminal domain XCC2513 PF17384 RimP C-terminal SH3 domain XCC2515 PF00361 Proton-conducting membrane transporter XCC2516 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus XCC2516 PF00361 Proton-conducting membrane transporter XCC2517 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XCC2517 PF00361 Proton-conducting membrane transporter XCC2518 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XCC2519 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XCC2520 PF12838 4Fe-4S dicluster domain XCC2521 PF00146 NADH dehydrogenase XCC2522 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCC2522 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal XCC2522 PF00384 Molybdopterin oxidoreductase XCC2523 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XCC2523 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XCC2523 PF10531 SLBB domain XCC2525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XCC2526 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XCC2527 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XCC2528 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XCC2531 PF00121 Triosephosphate isomerase XCC2532 PF00106 short chain dehydrogenase XCC2534 PF01152 Bacterial-like globin XCC2536 PF00990 Diguanylate cyclase, GGDEF domain XCC2536 PF00563 EAL domain XCC2536 PF03707 Bacterial signalling protein N terminal repeat XCC2539 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCC2539 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCC2539 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCC2539 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCC2540 PF17848 Acetyl-coA carboxylase zinc finger domain XCC2540 PF01039 Carboxyl transferase domain XCC2541 PF00290 Tryptophan synthase alpha chain XCC2543 PF00291 Pyridoxal-phosphate dependent enzyme XCC2544 PF03466 LysR substrate binding domain XCC2544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC2545 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XCC2546 PF01416 tRNA pseudouridine synthase XCC2549 PF02774 Semialdehyde dehydrogenase, dimerisation domain XCC2549 PF01118 Semialdehyde dehydrogenase, NAD binding domain XCC2550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XCC2550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XCC2551 PF01264 Chorismate synthase XCC2553 PF05175 Methyltransferase small domain XCC2554 PF02630 SCO1/SenC XCC2555 PF02666 Phosphatidylserine decarboxylase XCC2558 PF05872 Bacterial protein of unknown function (DUF853) XCC2559 PF00293 NUDIX domain XCC2563 PF03449 Transcription elongation factor, N-terminal XCC2563 PF01272 Transcription elongation factor, GreA/GreB, C-term XCC2564 PF04055 Radical SAM superfamily XCC2564 PF00919 Uncharacterized protein family UPF0004 XCC2564 PF18693 TRAM domain XCC2565 PF02661 Fic/DOC family XCC2566 PF01738 Dienelactone hydrolase family XCC2570 PF00692 dUTPase XCC2571 PF10609 NUBPL iron-transfer P-loop NTPase XCC2572 PF07715 TonB-dependent Receptor Plug Domain XCC2572 PF00593 TonB dependent receptor XCC2574 PF05649 Peptidase family M13 XCC2574 PF01431 Peptidase family M13 XCC2575 PF05649 Peptidase family M13 XCC2575 PF01431 Peptidase family M13 XCC2579 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC2579 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCC2580 PF01266 FAD dependent oxidoreductase XCC2581 PF04235 Protein of unknown function (DUF418) XCC2582 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XCC2583 PF00877 NlpC/P60 family XCC2584 PF00877 NlpC/P60 family XCC2590 PF00158 Sigma-54 interaction domain XCC2590 PF02954 Bacterial regulatory protein, Fis family XCC2590 PF00072 Response regulator receiver domain XCC2591 PF02954 Bacterial regulatory protein, Fis family XCC2591 PF00989 PAS fold XCC2591 PF00158 Sigma-54 interaction domain XCC2592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2592 PF00512 His Kinase A (phospho-acceptor) domain XCC2596 PF00375 Sodium:dicarboxylate symporter family XCC2597 PF00245 Alkaline phosphatase XCC2598 PF09179 TilS substrate binding domain XCC2598 PF11734 TilS substrate C-terminal domain XCC2598 PF01171 PP-loop family XCC2599 PF02609 Exonuclease VII small subunit XCC2600 PF00348 Polyprenyl synthetase XCC2602 PF14521 Lysine-specific metallo-endopeptidase XCC2604 PF01523 Putative modulator of DNA gyrase XCC2605 PF04751 Protein of unknown function (DUF615) XCC2606 PF01523 Putative modulator of DNA gyrase XCC2608 PF13502 AsmA-like C-terminal region XCC2608 PF13116 Protein of unknown function XCC2609 PF00575 S1 RNA binding domain XCC2609 PF10150 Ribonuclease E/G family XCC2610 PF02545 Maf-like protein XCC2611 PF04402 Protein of unknown function (DUF541) XCC2613 PF02590 Predicted SPOUT methyltransferase XCC2616 PF01467 Cytidylyltransferase-like XCC2619 PF08264 Anticodon-binding domain of tRNA XCC2619 PF13603 Leucyl-tRNA synthetase, Domain 2 XCC2619 PF00133 tRNA synthetases class I (I, L, M and V) XCC2620 PF13603 Leucyl-tRNA synthetase, Domain 2 XCC2620 PF00133 tRNA synthetases class I (I, L, M and V) XCC2620 PF08264 Anticodon-binding domain of tRNA XCC2622 PF00085 Thioredoxin XCC2624 PF04070 Domain of unknown function (DUF378) XCC2627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC2627 PF03466 LysR substrate binding domain XCC2628 PF01022 Bacterial regulatory protein, arsR family XCC2633 PF00664 ABC transporter transmembrane region XCC2633 PF00005 ABC transporter XCC2634 PF00999 Sodium/hydrogen exchanger family XCC2636 PF00144 Beta-lactamase XCC2637 PF03737 Aldolase/RraA XCC2640 PF01479 S4 domain XCC2640 PF00849 RNA pseudouridylate synthase XCC2641 PF00563 EAL domain XCC2641 PF00990 Diguanylate cyclase, GGDEF domain XCC2641 PF08448 PAS fold XCC2642 PF00271 Helicase conserved C-terminal domain XCC2642 PF03880 DbpA RNA binding domain XCC2642 PF00270 DEAD/DEAH box helicase XCC2647 PF01494 FAD binding domain XCC2653 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XCC2653 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XCC2655 PF00654 Voltage gated chloride channel XCC2658 PF00593 TonB dependent receptor XCC2658 PF07715 TonB-dependent Receptor Plug Domain XCC2661 PF02322 Cytochrome bd terminal oxidase subunit II XCC2662 PF01654 Cytochrome bd terminal oxidase subunit I XCC2664 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XCC2664 PF12838 4Fe-4S dicluster domain XCC2664 PF00384 Molybdopterin oxidoreductase XCC2664 PF01568 Molydopterin dinucleotide binding domain XCC2664 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCC2666 PF05922 Peptidase inhibitor I9 XCC2666 PF00082 Subtilase family XCC2666 PF02225 PA domain XCC2666 PF13860 FlgD Ig-like domain XCC2671 PF00248 Aldo/keto reductase family XCC2672 PF07690 Major Facilitator Superfamily XCC2673 PF03466 LysR substrate binding domain XCC2673 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC2674 PF01483 Proprotein convertase P-domain XCC2674 PF00082 Subtilase family XCC2676 PF12833 Helix-turn-helix domain XCC2676 PF06719 AraC-type transcriptional regulator N-terminus XCC2678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC2678 PF03466 LysR substrate binding domain XCC2679 PF00248 Aldo/keto reductase family XCC2680 PF00440 Bacterial regulatory proteins, tetR family XCC2680 PF16859 Tetracyclin repressor-like, C-terminal domain XCC2681 PF02321 Outer membrane efflux protein XCC2682 PF00873 AcrB/AcrD/AcrF family XCC2683 PF00529 HlyD membrane-fusion protein of T1SS XCC2683 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC2685 PF01475 Ferric uptake regulator family XCC2686 PF00749 tRNA synthetases class I (E and Q), catalytic domain XCC2692 PF06123 Inner membrane protein CreD XCC2694 PF00672 HAMP domain XCC2694 PF00512 His Kinase A (phospho-acceptor) domain XCC2694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2695 PF00072 Response regulator receiver domain XCC2695 PF00486 Transcriptional regulatory protein, C terminal XCC2696 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XCC2698 PF03461 TRCF domain XCC2698 PF02559 CarD-like/TRCF domain XCC2698 PF00271 Helicase conserved C-terminal domain XCC2698 PF17757 UvrB interaction domain XCC2698 PF00270 DEAD/DEAH box helicase XCC2700 PF01584 CheW-like domain XCC2700 PF02895 Signal transducing histidine kinase, homodimeric domain XCC2700 PF09078 CheY binding XCC2700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2700 PF01627 Hpt domain XCC2701 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC2701 PF02203 Tar ligand binding domain homologue XCC2701 PF00672 HAMP domain XCC2702 PF01584 CheW-like domain XCC2703 PF00990 Diguanylate cyclase, GGDEF domain XCC2703 PF13426 PAS domain XCC2703 PF00563 EAL domain XCC2704 PF03705 CheR methyltransferase, all-alpha domain XCC2704 PF01739 CheR methyltransferase, SAM binding domain XCC2705 PF00072 Response regulator receiver domain XCC2705 PF01339 CheB methylesterase XCC2706 PF13091 PLD-like domain XCC2707 PF01527 Transposase XCC2708 PF13276 HTH-like domain XCC2708 PF13333 Integrase core domain XCC2708 PF00665 Integrase core domain XCC2709 PF01609 Transposase DDE domain XCC2709 PF05598 Transposase domain (DUF772) XCC2710 PF01431 Peptidase family M13 XCC2710 PF05649 Peptidase family M13 XCC2712 PF00300 Histidine phosphatase superfamily (branch 1) XCC2713 PF04493 Endonuclease V XCC2714 PF02678 Pirin XCC2714 PF05726 Pirin C-terminal cupin domain XCC2717 PF05726 Pirin C-terminal cupin domain XCC2717 PF02678 Pirin XCC2718 PF13722 5TM C-terminal transporter carbon starvation CstA XCC2718 PF02554 Carbon starvation protein CstA XCC2719 PF04328 Selenoprotein, putative XCC2725 PF12804 MobA-like NTP transferase domain XCC2726 PF02625 XdhC and CoxI family XCC2726 PF13478 XdhC Rossmann domain XCC2727 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XCC2727 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCC2728 PF03450 CO dehydrogenase flavoprotein C-terminal domain XCC2728 PF00941 FAD binding domain in molybdopterin dehydrogenase XCC2729 PF01799 [2Fe-2S] binding domain XCC2729 PF10518 TAT (twin-arginine translocation) pathway signal sequence XCC2729 PF00111 2Fe-2S iron-sulfur cluster binding domain XCC2730 PF08240 Alcohol dehydrogenase GroES-like domain XCC2730 PF00107 Zinc-binding dehydrogenase XCC2731 PF00360 Phytochrome region XCC2731 PF00990 Diguanylate cyclase, GGDEF domain XCC2731 PF00563 EAL domain XCC2731 PF01590 GAF domain XCC2733 PF12102 Domain of unknown function (DUF3578) XCC2733 PF07728 AAA domain (dynein-related subfamily) XCC2735 PF00436 Single-strand binding protein family XCC2736 PF00348 Polyprenyl synthetase XCC2738 PF08245 Mur ligase middle domain XCC2741 PF00696 Amino acid kinase family XCC2741 PF01842 ACT domain XCC2742 PF02567 Phenazine biosynthesis-like protein XCC2743 PF02567 Phenazine biosynthesis-like protein XCC2745 PF02566 OsmC-like protein XCC2746 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XCC2746 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XCC2747 PF03652 Holliday junction resolvase XCC2748 PF02622 Uncharacterized ACR, COG1678 XCC2749 PF13687 Domain of unknown function (DUF4153) XCC2750 PF13673 Acetyltransferase (GNAT) domain XCC2750 PF13302 Acetyltransferase (GNAT) domain XCC2750 PF00117 Glutamine amidotransferase class-I XCC2750 PF00958 GMP synthase C terminal domain XCC2750 PF03352 Methyladenine glycosylase XCC2754 PF00437 Type II/IV secretion system protein XCC2755 PF00437 Type II/IV secretion system protein XCC2756 PF01168 Alanine racemase, N-terminal domain XCC2757 PF03807 NADP oxidoreductase coenzyme F420-dependent XCC2757 PF14748 Pyrroline-5-carboxylate reductase dimerisation XCC2763 PF01965 DJ-1/PfpI family XCC2766 PF01458 Uncharacterized protein family (UPF0051) XCC2767 PF00005 ABC transporter XCC2768 PF01458 Uncharacterized protein family (UPF0051) XCC2769 PF00266 Aminotransferase class-V XCC2771 PF00355 Rieske [2Fe-2S] domain XCC2772 PF00593 TonB dependent receptor XCC2772 PF07715 TonB-dependent Receptor Plug Domain XCC2773 PF18331 PKHD-type hydroxylase C-terminal domain XCC2773 PF13640 2OG-Fe(II) oxygenase superfamily XCC2778 PF02424 ApbE family XCC2779 PF00667 FAD binding domain XCC2779 PF00258 Flavodoxin XCC2779 PF00175 Oxidoreductase NAD-binding domain XCC2782 PF01546 Peptidase family M20/M25/M40 XCC2782 PF07687 Peptidase dimerisation domain XCC2784 PF01636 Phosphotransferase enzyme family XCC2785 PF00483 Nucleotidyl transferase XCC2786 PF00308 Bacterial dnaA protein XCC2787 PF01594 AI-2E family transporter XCC2789 PF00586 AIR synthase related protein, N-terminal domain XCC2789 PF02769 AIR synthase related protein, C-terminal domain XCC2791 PF00551 Formyl transferase XCC2795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XCC2796 PF01722 BolA-like protein XCC2797 PF01380 SIS domain XCC2797 PF00571 CBS domain XCC2801 PF00005 ABC transporter XCC2802 PF04552 Sigma-54, DNA binding domain XCC2802 PF00309 Sigma-54 factor, Activator interacting domain (AID) XCC2802 PF04963 Sigma-54 factor, core binding domain XCC2803 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XCC2804 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XCC2805 PF07475 HPr Serine kinase C-terminal domain XCC2805 PF02603 HPr Serine kinase N terminus XCC2806 PF03668 P-loop ATPase protein family XCC2808 PF00381 PTS HPr component phosphorylation site XCC2809 PF05524 PEP-utilising enzyme, N-terminal XCC2809 PF02896 PEP-utilising enzyme, TIM barrel domain XCC2809 PF00391 PEP-utilising enzyme, mobile domain XCC2810 PF03448 MgtE intracellular N domain XCC2810 PF01769 Divalent cation transporter XCC2810 PF00571 CBS domain XCC2812 PF02322 Cytochrome bd terminal oxidase subunit II XCC2813 PF01654 Cytochrome bd terminal oxidase subunit I XCC2814 PF00324 Amino acid permease XCC2815 PF00544 Pectate lyase XCC2817 PF00561 alpha/beta hydrolase fold XCC2818 PF00196 Bacterial regulatory proteins, luxR family XCC2819 PF00324 Amino acid permease XCC2822 PF00072 Response regulator receiver domain XCC2822 PF01339 CheB methylesterase XCC2825 PF04820 Tryptophan halogenase XCC2831 PF00376 MerR family regulatory protein XCC2831 PF09278 MerR, DNA binding XCC2833 PF03738 Glutathionylspermidine synthase preATP-grasp XCC2838 PF04012 PspA/IM30 family XCC2840 PF01243 Pyridoxamine 5'-phosphate oxidase XCC2840 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XCC2841 PF01202 Shikimate kinase XCC2842 PF01761 3-dehydroquinate synthase XCC2844 PF01208 Uroporphyrinogen decarboxylase (URO-D) XCC2845 PF07690 Major Facilitator Superfamily XCC2846 PF00512 His Kinase A (phospho-acceptor) domain XCC2846 PF00072 Response regulator receiver domain XCC2846 PF01627 Hpt domain XCC2846 PF17149 Periplasmic sensor domain found in signal transduction proteins XCC2846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2846 PF00672 HAMP domain XCC2847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2847 PF17149 Periplasmic sensor domain found in signal transduction proteins XCC2847 PF00512 His Kinase A (phospho-acceptor) domain XCC2847 PF01627 Hpt domain XCC2847 PF00072 Response regulator receiver domain XCC2847 PF00672 HAMP domain XCC2848 PF17149 Periplasmic sensor domain found in signal transduction proteins XCC2848 PF00072 Response regulator receiver domain XCC2848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2848 PF00672 HAMP domain XCC2848 PF01627 Hpt domain XCC2848 PF00512 His Kinase A (phospho-acceptor) domain XCC2849 PF04264 YceI-like domain XCC2853 PF03313 Serine dehydratase alpha chain XCC2853 PF03315 Serine dehydratase beta chain XCC2854 PF12697 Alpha/beta hydrolase family XCC2855 PF00696 Amino acid kinase family XCC2855 PF00742 Homoserine dehydrogenase XCC2855 PF03447 Homoserine dehydrogenase, NAD binding domain XCC2856 PF01053 Cys/Met metabolism PLP-dependent enzyme XCC2857 PF00561 alpha/beta hydrolase fold XCC2858 PF01551 Peptidase family M23 XCC2858 PF08460 Bacterial SH3 domain XCC2859 PF00009 Elongation factor Tu GTP binding domain XCC2859 PF16658 Class II release factor RF3, C-terminal domain XCC2860 PF03006 Haemolysin-III related XCC2861 PF05170 AsmA family XCC2862 PF00478 IMP dehydrogenase / GMP reductase domain XCC2862 PF00571 CBS domain XCC2863 PF00535 Glycosyl transferase family 2 XCC2864 PF00912 Transglycosylase XCC2865 PF01430 Hsp33 protein XCC2867 PF00593 TonB dependent receptor XCC2867 PF07715 TonB-dependent Receptor Plug Domain XCC2868 PF00440 Bacterial regulatory proteins, tetR family XCC2870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XCC2870 PF09317 Domain of unknown function (DUF1974) XCC2870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XCC2870 PF02770 Acyl-CoA dehydrogenase, middle domain XCC2876 PF01597 Glycine cleavage H-protein XCC2877 PF01571 Aminomethyltransferase folate-binding domain XCC2877 PF08669 Glycine cleavage T-protein C-terminal barrel domain XCC2879 PF01145 SPFH domain / Band 7 family XCC2879 PF16200 C-terminal region of band_7 XCC2880 PF02694 Uncharacterised BCR, YnfA/UPF0060 family XCC2881 PF03819 MazG nucleotide pyrophosphohydrolase domain XCC2882 PF00459 Inositol monophosphatase family XCC2883 PF00293 NUDIX domain XCC2884 PF00202 Aminotransferase class-III XCC2885 PF04452 RNA methyltransferase XCC2886 PF02685 Glucokinase XCC2889 PF00704 Glycosyl hydrolases family 18 XCC2889 PF01476 LysM domain XCC2890 PF07691 PA14 domain XCC2890 PF02838 Glycosyl hydrolase family 20, domain 2 XCC2890 PF00728 Glycosyl hydrolase family 20, catalytic domain XCC2892 PF07691 PA14 domain XCC2892 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCC2892 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC2892 PF14310 Fibronectin type III-like domain XCC2894 PF07971 Glycosyl hydrolase family 92 XCC2894 PF17678 Glycosyl hydrolase family 92 N-terminal domain XCC2895 PF01301 Glycosyl hydrolases family 35 XCC2897 PF00665 Integrase core domain XCC2897 PF13333 Integrase core domain XCC2897 PF13276 HTH-like domain XCC2898 PF01527 Transposase XCC2902 PF12161 HsdM N-terminal domain XCC2902 PF02384 N-6 DNA Methylase XCC2905 PF18766 SWI2/SNF2 ATPase XCC2905 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XCC2905 PF11867 Domain of unknown function (DUF3387) XCC2912 PF00067 Cytochrome P450 XCC2913 PF03932 CutC family XCC2914 PF01112 Asparaginase XCC2915 PF12034 Domain of unknown function (DUF3520) XCC2915 PF12450 von Willebrand factor XCC2915 PF00092 von Willebrand factor type A domain XCC2916 PF04542 Sigma-70 region 2 XCC2916 PF08281 Sigma-70, region 4 XCC2918 PF13302 Acetyltransferase (GNAT) domain XCC2921 PF01627 Hpt domain XCC2921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC2921 PF02895 Signal transducing histidine kinase, homodimeric domain XCC2921 PF01584 CheW-like domain XCC2921 PF00072 Response regulator receiver domain XCC2922 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC2922 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XCC2923 PF01584 CheW-like domain XCC2924 PF00072 Response regulator receiver domain XCC2925 PF00072 Response regulator receiver domain XCC2926 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XCC2926 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XCC2928 PF03747 ADP-ribosylglycohydrolase XCC2929 PF00814 Glycoprotease family XCC2930 PF13307 Helicase C-terminal domain XCC2930 PF04851 Type III restriction enzyme, res subunit XCC2932 PF14814 Bifunctional transglycosylase second domain XCC2932 PF00912 Transglycosylase XCC2932 PF00905 Penicillin binding protein transpeptidase domain XCC2933 PF00535 Glycosyl transferase family 2 XCC2936 PF04607 Region found in RelA / SpoT proteins XCC2936 PF13291 ACT domain XCC2936 PF02824 TGS domain XCC2937 PF12706 Beta-lactamase superfamily domain XCC2938 PF03070 TENA/THI-4/PQQC family XCC2939 PF05402 Coenzyme PQQ synthesis protein D (PqqD) XCC2940 PF13186 Iron-sulfur cluster-binding domain XCC2940 PF04055 Radical SAM superfamily XCC2943 PF02685 Glucokinase XCC2945 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XCC2945 PF00271 Helicase conserved C-terminal domain XCC2945 PF00270 DEAD/DEAH box helicase XCC2945 PF11898 Domain of unknown function (DUF3418) XCC2945 PF04408 Helicase associated domain (HA2) XCC2946 PF00210 Ferritin-like domain XCC2947 PF09382 RQC domain XCC2947 PF00271 Helicase conserved C-terminal domain XCC2947 PF00570 HRDC domain XCC2947 PF00270 DEAD/DEAH box helicase XCC2947 PF16124 RecQ zinc-binding XCC2951 PF00849 RNA pseudouridylate synthase XCC2951 PF01479 S4 domain XCC2954 PF01810 LysE type translocator XCC2955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC2955 PF03466 LysR substrate binding domain XCC2956 PF00654 Voltage gated chloride channel XCC2958 PF00072 Response regulator receiver domain XCC2963 PF00717 Peptidase S24-like XCC2964 PF11799 impB/mucB/samB family C-terminal domain XCC2964 PF00817 impB/mucB/samB family XCC2964 PF13438 Domain of unknown function (DUF4113) XCC2964 PF11798 IMS family HHH motif XCC2967 PF01555 DNA methylase XCC3014 PF06508 Queuosine biosynthesis protein QueC XCC3015 PF04055 Radical SAM superfamily XCC3017 PF00691 OmpA family XCC3018 PF04052 TolB amino-terminal domain XCC3018 PF07676 WD40-like Beta Propeller Repeat XCC3020 PF02472 Biopolymer transport protein ExbD/TolR XCC3021 PF01618 MotA/TolQ/ExbB proton channel family XCC3022 PF03061 Thioesterase superfamily XCC3023 PF17864 RuvB AAA lid domain XCC3023 PF05491 RuvB C-terminal winged helix domain XCC3023 PF05496 Holliday junction DNA helicase RuvB P-loop domain XCC3024 PF02705 K+ potassium transporter XCC3025 PF07499 RuvA, C-terminal domain XCC3025 PF01330 RuvA N terminal domain XCC3026 PF02075 Crossover junction endodeoxyribonuclease RuvC XCC3027 PF01709 Transcriptional regulator XCC3030 PF02938 GAD domain XCC3030 PF01336 OB-fold nucleic acid binding domain XCC3030 PF00152 tRNA synthetases class II (D, K and N) XCC3034 PF07690 Major Facilitator Superfamily XCC3035 PF00982 Glycosyltransferase family 20 XCC3035 PF05116 Sucrose-6F-phosphate phosphohydrolase XCC3037 PF04185 Phosphoesterase family XCC3037 PF05506 Domain of unknown function (DUF756) XCC3038 PF13472 GDSL-like Lipase/Acylhydrolase family XCC3038 PF07859 alpha/beta hydrolase fold XCC3040 PF03466 LysR substrate binding domain XCC3040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3042 PF00005 ABC transporter XCC3042 PF12848 ABC transporter XCC3043 PF00593 TonB dependent receptor XCC3043 PF07715 TonB-dependent Receptor Plug Domain XCC3045 PF07715 TonB-dependent Receptor Plug Domain XCC3045 PF00593 TonB dependent receptor XCC3046 PF07715 TonB-dependent Receptor Plug Domain XCC3046 PF00593 TonB dependent receptor XCC3047 PF00067 Cytochrome P450 XCC3048 PF00999 Sodium/hydrogen exchanger family XCC3048 PF02254 TrkA-N domain XCC3050 PF07660 Secretin and TonB N terminus short domain XCC3050 PF07715 TonB-dependent Receptor Plug Domain XCC3050 PF00593 TonB dependent receptor XCC3052 PF04183 IucA / IucC family XCC3052 PF06276 Ferric iron reductase FhuF-like transporter XCC3053 PF07690 Major Facilitator Superfamily XCC3054 PF06276 Ferric iron reductase FhuF-like transporter XCC3054 PF04183 IucA / IucC family XCC3055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XCC3055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XCC3057 PF02654 Cobalamin-5-phosphate synthase XCC3059 PF02277 Phosphoribosyltransferase XCC3060 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase XCC3061 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCC3061 PF07685 CobB/CobQ-like glutamine amidotransferase domain XCC3062 PF03186 CobD/Cbib protein XCC3062 PF17113 Regulatory signalling modulator protein AmpE XCC3063 PF07685 CobB/CobQ-like glutamine amidotransferase domain XCC3063 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XCC3064 PF12557 Cob(I)alamin adenosyltransferase N terminal XCC3064 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP XCC3067 PF07715 TonB-dependent Receptor Plug Domain XCC3067 PF00593 TonB dependent receptor XCC3068 PF01053 Cys/Met metabolism PLP-dependent enzyme XCC3070 PF02861 Clp amino terminal domain, pathogenicity island component XCC3070 PF10431 C-terminal, D2-small domain, of ClpB protein XCC3070 PF17871 AAA lid domain XCC3070 PF07724 AAA domain (Cdc48 subfamily) XCC3070 PF00004 ATPase family associated with various cellular activities (AAA) XCC3071 PF00005 ABC transporter XCC3072 PF01541 GIY-YIG catalytic domain XCC3079 PF00593 TonB dependent receptor XCC3079 PF07715 TonB-dependent Receptor Plug Domain XCC3080 PF02358 Trehalose-phosphatase XCC3081 PF00723 Glycosyl hydrolases family 15 XCC3082 PF00982 Glycosyltransferase family 20 XCC3083 PF01011 PQQ enzyme repeat XCC3084 PF00672 HAMP domain XCC3084 PF02203 Tar ligand binding domain homologue XCC3084 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC3087 PF02578 Multi-copper polyphenol oxidoreductase laccase XCC3088 PF00849 RNA pseudouridylate synthase XCC3089 PF13525 Outer membrane lipoprotein XCC3091 PF02540 NAD synthase XCC3091 PF00795 Carbon-nitrogen hydrolase XCC3093 PF00549 CoA-ligase XCC3093 PF02629 CoA binding domain XCC3094 PF08442 ATP-grasp domain XCC3094 PF00549 CoA-ligase XCC3095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3095 PF00512 His Kinase A (phospho-acceptor) domain XCC3096 PF00158 Sigma-54 interaction domain XCC3096 PF00072 Response regulator receiver domain XCC3096 PF02954 Bacterial regulatory protein, Fis family XCC3097 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCC3097 PF00437 Type II/IV secretion system protein XCC3098 PF07963 Prokaryotic N-terminal methylation motif XCC3098 PF00114 Pilin (bacterial filament) XCC3099 PF07963 Prokaryotic N-terminal methylation motif XCC3099 PF00114 Pilin (bacterial filament) XCC3100 PF00482 Type II secretion system (T2SS), protein F XCC3101 PF06750 Bacterial Peptidase A24 N-terminal domain XCC3101 PF01478 Type IV leader peptidase family XCC3102 PF01121 Dephospho-CoA kinase XCC3106 PF11808 Phosphate regulon sensor protein PhoR XCC3106 PF00512 His Kinase A (phospho-acceptor) domain XCC3106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3106 PF00989 PAS fold XCC3107 PF00072 Response regulator receiver domain XCC3107 PF00486 Transcriptional regulatory protein, C terminal XCC3108 PF08443 RimK-like ATP-grasp domain XCC3108 PF18030 RimK PreATP-grasp domain XCC3109 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XCC3109 PF00128 Alpha amylase, catalytic domain XCC3113 PF01527 Transposase XCC3114 PF13276 HTH-like domain XCC3114 PF13333 Integrase core domain XCC3114 PF00665 Integrase core domain XCC3120 PF08447 PAS fold XCC3120 PF08448 PAS fold XCC3120 PF00563 EAL domain XCC3120 PF00990 Diguanylate cyclase, GGDEF domain XCC3122 PF05598 Transposase domain (DUF772) XCC3123 PF01527 Transposase XCC3124 PF13683 Integrase core domain XCC3124 PF13276 HTH-like domain XCC3125 PF13683 Integrase core domain XCC3125 PF13276 HTH-like domain XCC3129 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XCC3134 PF01527 Transposase XCC3135 PF13683 Integrase core domain XCC3135 PF13276 HTH-like domain XCC3136 PF01527 Transposase XCC3137 PF13276 HTH-like domain XCC3137 PF13683 Integrase core domain XCC3138 PF01527 Transposase XCC3139 PF13276 HTH-like domain XCC3139 PF13683 Integrase core domain XCC3140 PF13683 Integrase core domain XCC3140 PF13276 HTH-like domain XCC3142 PF03466 LysR substrate binding domain XCC3142 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3143 PF01381 Helix-turn-helix XCC3146 PF14659 Phage integrase, N-terminal SAM-like domain XCC3146 PF00589 Phage integrase family XCC3146 PF13356 Arm DNA-binding domain XCC3148 PF03797 Autotransporter beta-domain XCC3148 PF00657 GDSL-like Lipase/Acylhydrolase XCC3150 PF05690 Thiazole biosynthesis protein ThiG XCC3151 PF02390 Putative methyltransferase XCC3152 PF03600 Citrate transporter XCC3152 PF02080 TrkA-C domain XCC3155 PF01557 Fumarylacetoacetate (FAA) hydrolase family XCC3156 PF01741 Large-conductance mechanosensitive channel, MscL XCC3159 PF00356 Bacterial regulatory proteins, lacI family XCC3160 PF00041 Fibronectin type III domain XCC3160 PF00553 Cellulose binding domain XCC3160 PF01341 Glycosyl hydrolases family 6 XCC3162 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCC3162 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCC3162 PF00703 Glycosyl hydrolases family 2 XCC3162 PF16353 Domain of unknown function(DUF4981) XCC3162 PF02929 Beta galactosidase small chain XCC3163 PF14508 Glycosyl-hydrolase 97 N-terminal XCC3163 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation XCC3163 PF10566 Glycoside hydrolase 97 XCC3164 PF00135 Carboxylesterase family XCC3165 PF00588 SpoU rRNA Methylase family XCC3165 PF08032 RNA 2'-O ribose methyltransferase substrate binding XCC3166 PF01235 Sodium:alanine symporter family XCC3168 PF01433 Peptidase family M1 domain XCC3168 PF11838 ERAP1-like C-terminal domain XCC3169 PF00873 AcrB/AcrD/AcrF family XCC3170 PF00529 HlyD membrane-fusion protein of T1SS XCC3170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC3171 PF00009 Elongation factor Tu GTP binding domain XCC3172 PF01507 Phosphoadenosine phosphosulfate reductase family XCC3173 PF00258 Flavodoxin XCC3173 PF00667 FAD binding domain XCC3173 PF00175 Oxidoreductase NAD-binding domain XCC3174 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XCC3174 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XCC3175 PF01507 Phosphoadenosine phosphosulfate reductase family XCC3178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3178 PF00072 Response regulator receiver domain XCC3178 PF01627 Hpt domain XCC3178 PF00672 HAMP domain XCC3178 PF00512 His Kinase A (phospho-acceptor) domain XCC3180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3180 PF03466 LysR substrate binding domain XCC3181 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XCC3181 PF14824 Sirohaem biosynthesis protein central XCC3181 PF10414 Sirohaem synthase dimerisation region XCC3182 PF00291 Pyridoxal-phosphate dependent enzyme XCC3184 PF01661 Macro domain XCC3185 PF00274 Fructose-bisphosphate aldolase class-I XCC3186 PF00224 Pyruvate kinase, barrel domain XCC3186 PF02887 Pyruvate kinase, alpha/beta domain XCC3187 PF13419 Haloacid dehalogenase-like hydrolase XCC3188 PF00162 Phosphoglycerate kinase XCC3192 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XCC3192 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XCC3195 PF03922 OmpW family XCC3197 PF04273 Putative phosphatase (DUF442) XCC3197 PF00753 Metallo-beta-lactamase superfamily XCC3201 PF00528 Binding-protein-dependent transport system inner membrane component XCC3202 PF00005 ABC transporter XCC3202 PF03459 TOBE domain XCC3206 PF03965 Penicillinase repressor XCC3210 PF03734 L,D-transpeptidase catalytic domain XCC3210 PF01476 LysM domain XCC3211 PF04225 Opacity-associated protein A LysM-like domain XCC3211 PF01551 Peptidase family M23 XCC3213 PF03466 LysR substrate binding domain XCC3213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3214 PF05598 Transposase domain (DUF772) XCC3215 PF00593 TonB dependent receptor XCC3215 PF07715 TonB-dependent Receptor Plug Domain XCC3216 PF07715 TonB-dependent Receptor Plug Domain XCC3216 PF00593 TonB dependent receptor XCC3217 PF01527 Transposase XCC3218 PF13276 HTH-like domain XCC3218 PF13683 Integrase core domain XCC3219 PF12146 Serine aminopeptidase, S33 XCC3220 PF02779 Transketolase, pyrimidine binding domain XCC3220 PF02780 Transketolase, C-terminal domain XCC3220 PF00456 Transketolase, thiamine diphosphate binding domain XCC3221 PF00375 Sodium:dicarboxylate symporter family XCC3223 PF07584 Aerotolerance regulator N-terminal XCC3223 PF00092 von Willebrand factor type A domain XCC3227 PF17863 AAA lid domain XCC3227 PF07726 ATPase family associated with various cellular activities (AAA) XCC3228 PF00263 Bacterial type II and III secretion system protein XCC3228 PF11741 AMIN domain XCC3228 PF03958 Bacterial type II/III secretion system short domain XCC3228 PF07660 Secretin and TonB N terminus short domain XCC3229 PF04351 Pilus assembly protein, PilP XCC3230 PF04350 Pilus assembly protein, PilO XCC3231 PF05137 Fimbrial assembly protein (PilN) XCC3232 PF11104 Type IV pilus assembly protein PilM; XCC3233 PF00905 Penicillin binding protein transpeptidase domain XCC3233 PF00912 Transglycosylase XCC3233 PF17092 Penicillin-binding protein OB-like domain XCC3235 PF00285 Citrate synthase, C-terminal domain XCC3236 PF01197 Ribosomal protein L31 XCC3237 PF01156 Inosine-uridine preferring nucleoside hydrolase XCC3238 PF00271 Helicase conserved C-terminal domain XCC3238 PF17191 RecG wedge domain XCC3238 PF00270 DEAD/DEAH box helicase XCC3239 PF01042 Endoribonuclease L-PSP XCC3240 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus XCC3240 PF08666 SAF domain XCC3241 PF03573 outer membrane porin, OprD family XCC3242 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCC3242 PF13378 Enolase C-terminal domain-like XCC3243 PF07690 Major Facilitator Superfamily XCC3244 PF00171 Aldehyde dehydrogenase family XCC3245 PF00701 Dihydrodipicolinate synthetase family XCC3246 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3246 PF03466 LysR substrate binding domain XCC3247 PF04607 Region found in RelA / SpoT proteins XCC3247 PF13291 ACT domain XCC3247 PF02824 TGS domain XCC3248 PF01192 RNA polymerase Rpb6 XCC3249 PF00625 Guanylate kinase XCC3250 PF03755 YicC-like family, N-terminal region XCC3250 PF08340 Domain of unknown function (DUF1732) XCC3251 PF01138 3' exoribonuclease family, domain 1 XCC3251 PF03725 3' exoribonuclease family, domain 2 XCC3252 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XCC3253 PF01725 Ham1 family XCC3254 PF06969 HemN C-terminal domain XCC3254 PF04055 Radical SAM superfamily XCC3257 PF00557 Metallopeptidase family M24 XCC3259 PF00557 Metallopeptidase family M24 XCC3259 PF05195 Aminopeptidase P, N-terminal domain XCC3260 PF03695 Uncharacterised protein family (UPF0149) XCC3262 PF05164 Cell division protein ZapA XCC3263 PF01812 5-formyltetrahydrofolate cyclo-ligase family XCC3265 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XCC3267 PF13369 Transglutaminase-like superfamily XCC3268 PF00301 Rubredoxin XCC3269 PF02581 Thiamine monophosphate synthase XCC3272 PF00202 Aminotransferase class-III XCC3273 PF17874 MalT-like TPR region XCC3273 PF00196 Bacterial regulatory proteins, luxR family XCC3274 PF00127 Copper binding proteins, plastocyanin/azurin family XCC3275 PF00155 Aminotransferase class I and II XCC3277 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XCC3277 PF00034 Cytochrome c XCC3278 PF01593 Flavin containing amine oxidoreductase XCC3282 PF00202 Aminotransferase class-III XCC3283 PF00027 Cyclic nucleotide-binding domain XCC3283 PF00520 Ion transport protein XCC3287 PF01569 PAP2 superfamily XCC3288 PF01062 Bestrophin, RFP-TM, chloride channel XCC3290 PF01225 Mur ligase family, catalytic domain XCC3290 PF08245 Mur ligase middle domain XCC3290 PF02875 Mur ligase family, glutamate ligase domain XCC3292 PF00365 Phosphofructokinase XCC3294 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XCC3297 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XCC3301 PF04610 TrbL/VirB6 plasmid conjugal transfer protein XCC3303 PF05598 Transposase domain (DUF772) XCC3303 PF01609 Transposase DDE domain XCC3306 PF01527 Transposase XCC3307 PF13276 HTH-like domain XCC3307 PF13683 Integrase core domain XCC3312 PF03030 Inorganic H+ pyrophosphatase XCC3314 PF00719 Inorganic pyrophosphatase XCC3316 PF07715 TonB-dependent Receptor Plug Domain XCC3316 PF00593 TonB dependent receptor XCC3317 PF12833 Helix-turn-helix domain XCC3318 PF00486 Transcriptional regulatory protein, C terminal XCC3318 PF18500 CadC C-terminal domain 1 XCC3319 PF13667 ThiC-associated domain XCC3319 PF01964 Radical SAM ThiC family XCC3320 PF00326 Prolyl oligopeptidase family XCC3320 PF07676 WD40-like Beta Propeller Repeat XCC3321 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC3321 PF02203 Tar ligand binding domain homologue XCC3321 PF00672 HAMP domain XCC3323 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XCC3323 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XCC3324 PF00205 Thiamine pyrophosphate enzyme, central domain XCC3324 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XCC3324 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XCC3326 PF00291 Pyridoxal-phosphate dependent enzyme XCC3327 PF00682 HMGL-like XCC3327 PF08502 LeuA allosteric (dimerisation) domain XCC3328 PF00180 Isocitrate/isopropylmalate dehydrogenase XCC3329 PF08241 Methyltransferase domain XCC3330 PF00694 Aconitase C-terminal domain XCC3331 PF00330 Aconitase family (aconitate hydratase) XCC3332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3333 PF00990 Diguanylate cyclase, GGDEF domain XCC3333 PF00563 EAL domain XCC3333 PF13188 PAS domain XCC3333 PF03707 Bacterial signalling protein N terminal repeat XCC3336 PF02321 Outer membrane efflux protein XCC3337 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XCC3338 PF03279 Bacterial lipid A biosynthesis acyltransferase XCC3343 PF05598 Transposase domain (DUF772) XCC3345 PF03949 Malic enzyme, NAD binding domain XCC3345 PF01515 Phosphate acetyl/butaryl transferase XCC3345 PF00390 Malic enzyme, N-terminal domain XCC3346 PF00375 Sodium:dicarboxylate symporter family XCC3348 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3348 PF00512 His Kinase A (phospho-acceptor) domain XCC3349 PF00072 Response regulator receiver domain XCC3349 PF00196 Bacterial regulatory proteins, luxR family XCC3351 PF00512 His Kinase A (phospho-acceptor) domain XCC3351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3351 PF08521 Two-component sensor kinase N-terminal XCC3352 PF00072 Response regulator receiver domain XCC3352 PF00486 Transcriptional regulatory protein, C terminal XCC3354 PF03600 Citrate transporter XCC3355 PF00106 short chain dehydrogenase XCC3356 PF00356 Bacterial regulatory proteins, lacI family XCC3359 PF00128 Alpha amylase, catalytic domain XCC3362 PF03193 RsgA GTPase XCC3364 PF00155 Aminotransferase class I and II XCC3367 PF01522 Polysaccharide deacetylase XCC3368 PF00462 Glutaredoxin XCC3371 PF01979 Amidohydrolase family XCC3372 PF01979 Amidohydrolase family XCC3382 PF02645 Uncharacterised protein, DegV family COG1307 XCC3384 PF00892 EamA-like transporter family XCC3385 PF02567 Phenazine biosynthesis-like protein XCC3386 PF00155 Aminotransferase class I and II XCC3386 PF00392 Bacterial regulatory proteins, gntR family XCC3387 PF00756 Putative esterase XCC3388 PF04828 Glutathione-dependent formaldehyde-activating enzyme XCC3389 PF00107 Zinc-binding dehydrogenase XCC3389 PF08240 Alcohol dehydrogenase GroES-like domain XCC3390 PF02583 Metal-sensitive transcriptional repressor XCC3391 PF03466 LysR substrate binding domain XCC3391 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3394 PF00072 Response regulator receiver domain XCC3394 PF00486 Transcriptional regulatory protein, C terminal XCC3395 PF00672 HAMP domain XCC3395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3395 PF00512 His Kinase A (phospho-acceptor) domain XCC3396 PF04107 Glutamate-cysteine ligase family 2(GCS2) XCC3397 PF01926 50S ribosome-binding GTPase XCC3398 PF00034 Cytochrome c XCC3400 PF01323 DSBA-like thioredoxin domain XCC3402 PF02028 BCCT, betaine/carnitine/choline family transporter XCC3403 PF00171 Aldehyde dehydrogenase family XCC3404 PF05199 GMC oxidoreductase XCC3404 PF00732 GMC oxidoreductase XCC3405 PF00593 TonB dependent receptor XCC3405 PF07715 TonB-dependent Receptor Plug Domain XCC3406 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XCC3406 PF01464 Transglycosylase SLT domain XCC3407 PF12627 Probable RNA and SrmB- binding site of polymerase A XCC3407 PF01743 Poly A polymerase head domain XCC3407 PF01966 HD domain XCC3410 PF01979 Amidohydrolase family XCC3411 PF01380 SIS domain XCC3412 PF00356 Bacterial regulatory proteins, lacI family XCC3413 PF07690 Major Facilitator Superfamily XCC3414 PF00392 Bacterial regulatory proteins, gntR family XCC3414 PF07702 UTRA domain XCC3418 PF03934 Type II secretion system (T2SS), protein K XCC3419 PF07963 Prokaryotic N-terminal methylation motif XCC3419 PF11612 Type II secretion system (T2SS), protein J XCC3420 PF02501 Type II secretion system (T2SS), protein I XCC3420 PF07963 Prokaryotic N-terminal methylation motif XCC3422 PF08334 Type II secretion system (T2SS), protein G XCC3422 PF07963 Prokaryotic N-terminal methylation motif XCC3423 PF00482 Type II secretion system (T2SS), protein F XCC3424 PF00437 Type II/IV secretion system protein XCC3425 PF03958 Bacterial type II/III secretion system short domain XCC3425 PF00263 Bacterial type II and III secretion system protein XCC3433 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XCC3434 PF00512 His Kinase A (phospho-acceptor) domain XCC3434 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3435 PF00072 Response regulator receiver domain XCC3436 PF08446 PAS fold XCC3436 PF00360 Phytochrome region XCC3436 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3436 PF00512 His Kinase A (phospho-acceptor) domain XCC3436 PF01590 GAF domain XCC3437 PF04972 BON domain XCC3438 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XCC3438 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XCC3439 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XCC3439 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XCC3446 PF01467 Cytidylyltransferase-like XCC3446 PF00293 NUDIX domain XCC3448 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3448 PF03466 LysR substrate binding domain XCC3450 PF00595 PDZ domain XCC3450 PF17804 Tail specific protease N-terminal domain XCC3450 PF03572 Peptidase family S41 XCC3450 PF11818 C-terminal domain of tail specific protease (DUF3340) XCC3451 PF04055 Radical SAM superfamily XCC3451 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XCC3452 PF03099 Biotin/lipoate A/B protein ligase family XCC3453 PF04359 Protein of unknown function (DUF493) XCC3456 PF07943 Penicillin-binding protein 5, C-terminal domain XCC3456 PF00768 D-alanyl-D-alanine carboxypeptidase XCC3457 PF05036 Sporulation related domain XCC3457 PF03330 Lytic transglycolase XCC3458 PF13406 Transglycosylase SLT domain XCC3459 PF00295 Glycosyl hydrolases family 28 XCC3462 PF02534 Type IV secretory system Conjugative DNA transfer XCC3463 PF13683 Integrase core domain XCC3463 PF13276 HTH-like domain XCC3464 PF01527 Transposase XCC3465 PF02534 Type IV secretory system Conjugative DNA transfer XCC3466 PF01098 Cell cycle protein XCC3467 PF03717 Penicillin-binding Protein dimerisation domain XCC3467 PF00905 Penicillin binding protein transpeptidase domain XCC3469 PF04085 rod shape-determining protein MreC XCC3471 PF00294 pfkB family carbohydrate kinase XCC3472 PF01590 GAF domain XCC3472 PF02954 Bacterial regulatory protein, Fis family XCC3472 PF00158 Sigma-54 interaction domain XCC3474 PF07660 Secretin and TonB N terminus short domain XCC3474 PF00593 TonB dependent receptor XCC3474 PF07715 TonB-dependent Receptor Plug Domain XCC3475 PF00107 Zinc-binding dehydrogenase XCC3475 PF08240 Alcohol dehydrogenase GroES-like domain XCC3478 PF00497 Bacterial extracellular solute-binding proteins, family 3 XCC3479 PF13360 PQQ-like domain XCC3480 PF00665 Integrase core domain XCC3480 PF13333 Integrase core domain XCC3480 PF13276 HTH-like domain XCC3481 PF01527 Transposase XCC3482 PF13360 PQQ-like domain XCC3485 PF01433 Peptidase family M1 domain XCC3485 PF11838 ERAP1-like C-terminal domain XCC3486 PF03707 Bacterial signalling protein N terminal repeat XCC3486 PF00990 Diguanylate cyclase, GGDEF domain XCC3486 PF00563 EAL domain XCC3488 PF01209 ubiE/COQ5 methyltransferase family XCC3489 PF13533 Biotin-lipoyl like XCC3490 PF13673 Acetyltransferase (GNAT) domain XCC3493 PF00004 ATPase family associated with various cellular activities (AAA) XCC3493 PF07724 AAA domain (Cdc48 subfamily) XCC3493 PF10431 C-terminal, D2-small domain, of ClpB protein XCC3494 PF00227 Proteasome subunit XCC3495 PF01527 Transposase XCC3496 PF13333 Integrase core domain XCC3496 PF13276 HTH-like domain XCC3496 PF00665 Integrase core domain XCC3497 PF02899 Phage integrase, N-terminal SAM-like domain XCC3497 PF00589 Phage integrase family XCC3499 PF01678 Diaminopimelate epimerase XCC3501 PF04304 Protein of unknown function (DUF454) XCC3502 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XCC3502 PF00326 Prolyl oligopeptidase family XCC3503 PF00155 Aminotransferase class I and II XCC3506 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XCC3506 PF00326 Prolyl oligopeptidase family XCC3511 PF03900 Porphobilinogen deaminase, C-terminal domain XCC3511 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XCC3512 PF04397 LytTr DNA-binding domain XCC3512 PF00072 Response regulator receiver domain XCC3513 PF06580 Histidine kinase XCC3513 PF07694 5TMR of 5TMR-LYT XCC3515 PF13632 Glycosyl transferase family group 2 XCC3516 PF02080 TrkA-C domain XCC3516 PF03600 Citrate transporter XCC3518 PF07715 TonB-dependent Receptor Plug Domain XCC3518 PF07660 Secretin and TonB N terminus short domain XCC3518 PF00593 TonB dependent receptor XCC3519 PF00990 Diguanylate cyclase, GGDEF domain XCC3519 PF08448 PAS fold XCC3520 PF00916 Sulfate permease family XCC3520 PF01740 STAS domain XCC3521 PF00150 Cellulase (glycosyl hydrolase family 5) XCC3521 PF00553 Cellulose binding domain XCC3522 PF00672 HAMP domain XCC3522 PF02203 Tar ligand binding domain homologue XCC3522 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XCC3523 PF13426 PAS domain XCC3523 PF08448 PAS fold XCC3523 PF08447 PAS fold XCC3523 PF05231 MASE1 XCC3523 PF00990 Diguanylate cyclase, GGDEF domain XCC3523 PF00563 EAL domain XCC3527 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XCC3527 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XCC3529 PF01204 Trehalase XCC3532 PF01544 CorA-like Mg2+ transporter protein XCC3533 PF00324 Amino acid permease XCC3534 PF00553 Cellulose binding domain XCC3534 PF00041 Fibronectin type III domain XCC3534 PF01341 Glycosyl hydrolases family 6 XCC3535 PF03330 Lytic transglycolase XCC3537 PF00497 Bacterial extracellular solute-binding proteins, family 3 XCC3538 PF00892 EamA-like transporter family XCC3544 PF13192 Thioredoxin domain XCC3544 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC3545 PF02082 Transcriptional regulator XCC3546 PF00990 Diguanylate cyclase, GGDEF domain XCC3547 PF07759 Protein of unknown function (DUF1615) XCC3548 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCC3548 PF00326 Prolyl oligopeptidase family XCC3549 PF12823 Domain of unknown function (DUF3817) XCC3549 PF03176 MMPL family XCC3556 PF11838 ERAP1-like C-terminal domain XCC3556 PF01433 Peptidase family M1 domain XCC3561 PF13409 Glutathione S-transferase, N-terminal domain XCC3572 PF01527 Transposase XCC3573 PF13276 HTH-like domain XCC3573 PF13683 Integrase core domain XCC3575 PF01527 Transposase XCC3576 PF13683 Integrase core domain XCC3576 PF13276 HTH-like domain XCC3579 PF13333 Integrase core domain XCC3579 PF00665 Integrase core domain XCC3579 PF13276 HTH-like domain XCC3580 PF13276 HTH-like domain XCC3580 PF13683 Integrase core domain XCC3581 PF01527 Transposase XCC3582 PF13276 HTH-like domain XCC3582 PF13333 Integrase core domain XCC3582 PF00665 Integrase core domain XCC3583 PF01527 Transposase XCC3585 PF01609 Transposase DDE domain XCC3585 PF05598 Transposase domain (DUF772) XCC3586 PF05598 Transposase domain (DUF772) XCC3587 PF00793 DAHP synthetase I family XCC3588 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain XCC3588 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain XCC3591 PF08450 SMP-30/Gluconolactonase/LRE-like region XCC3594 PF04773 FecR protein XCC3594 PF16220 Domain of unknown function (DUF4880) XCC3595 PF00593 TonB dependent receptor XCC3595 PF07660 Secretin and TonB N terminus short domain XCC3595 PF07715 TonB-dependent Receptor Plug Domain XCC3599 PF03710 Glutamate-ammonia ligase adenylyltransferase XCC3599 PF08335 GlnD PII-uridylyltransferase XCC3601 PF02592 Putative vitamin uptake transporter XCC3605 PF00881 Nitroreductase family XCC3606 PF04264 YceI-like domain XCC3608 PF13847 Methyltransferase domain XCC3608 PF03551 Transcriptional regulator PadR-like family XCC3609 PF16957 Malonate decarboxylase, alpha subunit, transporter XCC3610 PF06857 Malonate decarboxylase delta subunit (MdcD) XCC3611 PF01039 Carboxyl transferase domain XCC3613 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG XCC3614 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase XCC3615 PF00550 Phosphopantetheine attachment site XCC3615 PF02801 Beta-ketoacyl synthase, C-terminal domain XCC3615 PF08659 KR domain XCC3615 PF00109 Beta-ketoacyl synthase, N-terminal domain XCC3615 PF16197 Ketoacyl-synthetase C-terminal extension XCC3615 PF00698 Acyl transferase domain XCC3617 PF07729 FCD domain XCC3617 PF00392 Bacterial regulatory proteins, gntR family XCC3624 PF07745 Glycosyl hydrolase family 53 XCC3625 PF00456 Transketolase, thiamine diphosphate binding domain XCC3625 PF17831 Pyruvate dehydrogenase E1 component middle domain XCC3626 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) XCC3627 PF05598 Transposase domain (DUF772) XCC3628 PF03180 NLPA lipoprotein XCC3629 PF00528 Binding-protein-dependent transport system inner membrane component XCC3630 PF09383 NIL domain XCC3630 PF00005 ABC transporter XCC3631 PF00892 EamA-like transporter family XCC3632 PF04461 Protein of unknown function (DUF520) XCC3637 PF13419 Haloacid dehalogenase-like hydrolase XCC3638 PF01479 S4 domain XCC3638 PF00849 RNA pseudouridylate synthase XCC3639 PF08468 Methyltransferase small domain N-terminal XCC3639 PF05175 Methyltransferase small domain XCC3641 PF07995 Glucose / Sorbosone dehydrogenase XCC3643 PF00672 HAMP domain XCC3643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3643 PF00989 PAS fold XCC3643 PF00512 His Kinase A (phospho-acceptor) domain XCC3643 PF18698 Histidine kinase sensor domain XCC3647 PF00842 Alanine racemase, C-terminal domain XCC3647 PF01168 Alanine racemase, N-terminal domain XCC3648 PF01266 FAD dependent oxidoreductase XCC3649 PF01037 Lrp/AsnC ligand binding domain XCC3651 PF01641 SelR domain XCC3653 PF01618 MotA/TolQ/ExbB proton channel family XCC3654 PF00691 OmpA family XCC3654 PF13677 Membrane MotB of proton-channel complex MotA/MotB XCC3659 PF01061 ABC-2 type transporter XCC3660 PF00005 ABC transporter XCC3661 PF00999 Sodium/hydrogen exchanger family XCC3662 PF03795 YCII-related domain XCC3663 PF02469 Fasciclin domain XCC3664 PF03167 Uracil DNA glycosylase superfamily XCC3666 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XCC3667 PF03466 LysR substrate binding domain XCC3667 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3668 PF03358 NADPH-dependent FMN reductase XCC3669 PF00248 Aldo/keto reductase family XCC3671 PF01431 Peptidase family M13 XCC3671 PF05649 Peptidase family M13 XCC3674 PF13520 Amino acid permease XCC3676 PF04397 LytTr DNA-binding domain XCC3676 PF00072 Response regulator receiver domain XCC3677 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3677 PF06580 Histidine kinase XCC3677 PF00672 HAMP domain XCC3677 PF02743 Cache domain XCC3680 PF00857 Isochorismatase family XCC3681 PF05974 Domain of unknown function (DUF892) XCC3682 PF05974 Domain of unknown function (DUF892) XCC3683 PF05067 Manganese containing catalase XCC3686 PF01739 CheR methyltransferase, SAM binding domain XCC3686 PF01339 CheB methylesterase XCC3686 PF03705 CheR methyltransferase, all-alpha domain XCC3686 PF08448 PAS fold XCC3689 PF00072 Response regulator receiver domain XCC3689 PF00158 Sigma-54 interaction domain XCC3689 PF02954 Bacterial regulatory protein, Fis family XCC3691 PF01654 Cytochrome bd terminal oxidase subunit I XCC3692 PF02322 Cytochrome bd terminal oxidase subunit II XCC3696 PF16363 GDP-mannose 4,6 dehydratase XCC3698 PF03275 UDP-galactopyranose mutase XCC3700 PF00005 ABC transporter XCC3700 PF00664 ABC transporter transmembrane region XCC3703 PF13823 Alcohol dehydrogenase GroES-associated XCC3703 PF08240 Alcohol dehydrogenase GroES-like domain XCC3703 PF00107 Zinc-binding dehydrogenase XCC3709 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase XCC3709 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCC3714 PF00593 TonB dependent receptor XCC3714 PF07715 TonB-dependent Receptor Plug Domain XCC3717 PF00005 ABC transporter XCC3719 PF03466 LysR substrate binding domain XCC3719 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3720 PF01042 Endoribonuclease L-PSP XCC3724 PF00248 Aldo/keto reductase family XCC3725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3725 PF03466 LysR substrate binding domain XCC3729 PF00360 Phytochrome region XCC3729 PF00563 EAL domain XCC3729 PF00990 Diguanylate cyclase, GGDEF domain XCC3729 PF01590 GAF domain XCC3732 PF01527 Transposase XCC3733 PF13333 Integrase core domain XCC3733 PF00665 Integrase core domain XCC3733 PF13276 HTH-like domain XCC3736 PF03979 Sigma-70 factor, region 1.1 XCC3736 PF04542 Sigma-70 region 2 XCC3736 PF04539 Sigma-70 region 3 XCC3736 PF00140 Sigma-70 factor, region 1.2 XCC3736 PF04545 Sigma-70, region 4 XCC3736 PF04546 Sigma-70, non-essential region XCC3737 PF02580 D-Tyr-tRNA(Tyr) deacylase XCC3738 PF03279 Bacterial lipid A biosynthesis acyltransferase XCC3740 PF00925 GTP cyclohydrolase II XCC3744 PF00535 Glycosyl transferase family 2 XCC3747 PF01029 NusB family XCC3747 PF01189 16S rRNA methyltransferase RsmB/F XCC3748 PF00551 Formyl transferase XCC3748 PF02911 Formyl transferase, C-terminal domain XCC3749 PF01327 Polypeptide deformylase XCC3750 PF01476 LysM domain XCC3751 PF17782 DprA winged helix domain XCC3751 PF02481 DNA recombination-mediator protein A XCC3752 PF04361 Protein of unknown function (DUF494) XCC3753 PF00114 Pilin (bacterial filament) XCC3753 PF07963 Prokaryotic N-terminal methylation motif XCC3755 PF01131 DNA topoisomerase XCC3755 PF01751 Toprim domain XCC3755 PF13368 Topoisomerase C-terminal repeat XCC3756 PF01300 Telomere recombination XCC3759 PF00563 EAL domain XCC3759 PF00360 Phytochrome region XCC3759 PF01590 GAF domain XCC3759 PF00990 Diguanylate cyclase, GGDEF domain XCC3761 PF01343 Peptidase family S49 XCC3762 PF01554 MatE XCC3765 PF18074 Primosomal protein N C-terminal domain XCC3765 PF17764 3′ DNA-binding domain (3′BD) XCC3765 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XCC3765 PF00271 Helicase conserved C-terminal domain XCC3765 PF00270 DEAD/DEAH box helicase XCC3766 PF13417 Glutathione S-transferase, N-terminal domain XCC3766 PF00043 Glutathione S-transferase, C-terminal domain XCC3769 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC3770 PF03458 UPF0126 domain XCC3771 PF04542 Sigma-70 region 2 XCC3771 PF04545 Sigma-70, region 4 XCC3772 PF03167 Uracil DNA glycosylase superfamily XCC3773 PF00072 Response regulator receiver domain XCC3774 PF18075 FtsX extracellular domain XCC3775 PF00005 ABC transporter XCC3776 PF00271 Helicase conserved C-terminal domain XCC3776 PF12300 ATP-dependent RNA helicase RhlB XCC3776 PF00270 DEAD/DEAH box helicase XCC3777 PF00085 Thioredoxin XCC3778 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XCC3778 PF07497 Rho termination factor, RNA-binding domain XCC3778 PF07498 Rho termination factor, N-terminal domain XCC3780 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XCC3781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC3781 PF03466 LysR substrate binding domain XCC3782 PF03971 Monomeric isocitrate dehydrogenase XCC3784 PF01476 LysM domain XCC3784 PF00756 Putative esterase XCC3785 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XCC3785 PF14489 QueF-like protein XCC3786 PF01546 Peptidase family M20/M25/M40 XCC3786 PF07687 Peptidase dimerisation domain XCC3787 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC3788 PF00873 AcrB/AcrD/AcrF family XCC3789 PF00873 AcrB/AcrD/AcrF family XCC3792 PF04542 Sigma-70 region 2 XCC3792 PF08281 Sigma-70, region 4 XCC3793 PF07063 Domain of unknown function (DUF1338) XCC3801 PF01427 D-ala-D-ala dipeptidase XCC3802 PF01471 Putative peptidoglycan binding domain XCC3802 PF04717 Type VI secretion system, phage-baseplate injector XCC3805 PF01510 N-acetylmuramoyl-L-alanine amidase XCC3807 PF13378 Enolase C-terminal domain-like XCC3807 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCC3809 PF13520 Amino acid permease XCC3812 PF05360 yiaA/B two helix domain XCC3813 PF07995 Glucose / Sorbosone dehydrogenase XCC3814 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC3814 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCC3814 PF14310 Fibronectin type III-like domain XCC3815 PF02152 Dihydroneopterin aldolase XCC3816 PF00814 Glycoprotease family XCC3817 PF01165 Ribosomal protein S21 XCC3818 PF09424 Yqey-like protein XCC3819 PF03631 Virulence factor BrkB XCC3820 PF01807 CHC2 zinc finger XCC3820 PF08275 DNA primase catalytic core, N-terminal domain XCC3820 PF08278 DNA primase DnaG DnaB-binding XCC3820 PF10410 DnaB-helicase binding domain of primase XCC3822 PF13593 SBF-like CPA transporter family (DUF4137) XCC3823 PF11412 Disulphide bond corrector protein DsbC XCC3823 PF02683 Cytochrome C biogenesis protein transmembrane region XCC3824 PF01040 UbiA prenyltransferase family XCC3829 PF00510 Cytochrome c oxidase subunit III XCC3830 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 XCC3832 PF00115 Cytochrome C and Quinol oxidase polypeptide I XCC3833 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XCC3833 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XCC3835 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XCC3835 PF14850 DNA-binding domain of Proline dehydrogenase XCC3835 PF00171 Aldehyde dehydrogenase family XCC3835 PF01619 Proline dehydrogenase XCC3841 PF00579 tRNA synthetases class I (W and Y) XCC3842 PF04225 Opacity-associated protein A LysM-like domain XCC3842 PF01551 Peptidase family M23 XCC3843 PF03702 Anhydro-N-acetylmuramic acid kinase XCC3845 PF07690 Major Facilitator Superfamily XCC3846 PF03372 Endonuclease/Exonuclease/phosphatase family XCC3847 PF00156 Phosphoribosyl transferase domain XCC3849 PF13614 AAA domain XCC3850 PF02195 ParB-like nuclease domain XCC3850 PF17762 HTH domain found in ParB protein XCC3853 PF01370 NAD dependent epimerase/dehydratase family XCC3854 PF00535 Glycosyl transferase family 2 XCC3857 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XCC3857 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XCC3857 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XCC3857 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XCC3858 PF00692 dUTPase XCC3859 PF04127 DNA / pantothenate metabolism flavoprotein XCC3859 PF02441 Flavoprotein XCC3860 PF04002 RadC-like JAB domain XCC3861 PF05746 DALR anticodon binding domain XCC3861 PF03485 Arginyl tRNA synthetase N terminal domain XCC3861 PF00750 tRNA synthetases class I (R) XCC3864 PF00106 short chain dehydrogenase XCC3865 PF01757 Acyltransferase family XCC3866 PF03033 Glycosyltransferase family 28 N-terminal domain XCC3867 PF00550 Phosphopantetheine attachment site XCC3867 PF00975 Thioesterase domain XCC3867 PF00668 Condensation domain XCC3867 PF00501 AMP-binding enzyme XCC3867 PF13193 AMP-binding enzyme C-terminal domain XCC3868 PF17810 Arginine decarboxylase helical bundle domain XCC3868 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XCC3868 PF17944 Arginine decarboxylase C-terminal helical extension XCC3869 PF17284 Spermidine synthase tetramerisation domain XCC3872 PF00543 Nitrogen regulatory protein P-II XCC3873 PF04380 Membrane fusogenic activity XCC3874 PF01078 Magnesium chelatase, subunit ChlI XCC3874 PF13335 Magnesium chelatase, subunit ChlI C-terminal XCC3877 PF00563 EAL domain XCC3877 PF12792 CSS motif domain associated with EAL XCC3878 PF00487 Fatty acid desaturase XCC3879 PF00111 2Fe-2S iron-sulfur cluster binding domain XCC3879 PF00970 Oxidoreductase FAD-binding domain XCC3879 PF00175 Oxidoreductase NAD-binding domain XCC3880 PF00440 Bacterial regulatory proteins, tetR family XCC3883 PF01139 tRNA-splicing ligase RtcB XCC3890 PF01370 NAD dependent epimerase/dehydratase family XCC3890 PF08338 Domain of unknown function (DUF1731) XCC3891 PF07992 Pyridine nucleotide-disulphide oxidoreductase XCC3891 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XCC3893 PF00486 Transcriptional regulatory protein, C terminal XCC3893 PF00072 Response regulator receiver domain XCC3894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3894 PF00512 His Kinase A (phospho-acceptor) domain XCC3894 PF08521 Two-component sensor kinase N-terminal XCC3898 PF00595 PDZ domain XCC3902 PF01594 AI-2E family transporter XCC3903 PF13419 Haloacid dehalogenase-like hydrolase XCC3904 PF00883 Cytosol aminopeptidase family, catalytic domain XCC3904 PF02789 Cytosol aminopeptidase family, N-terminal domain XCC3909 PF00072 Response regulator receiver domain XCC3909 PF00196 Bacterial regulatory proteins, luxR family XCC3910 PF07730 Histidine kinase XCC3911 PF13533 Biotin-lipoyl like XCC3912 PF00005 ABC transporter XCC3916 PF00892 EamA-like transporter family XCC3917 PF00892 EamA-like transporter family XCC3922 PF00753 Metallo-beta-lactamase superfamily XCC3923 PF00579 tRNA synthetases class I (W and Y) XCC3924 PF05532 CsbD-like XCC3926 PF00491 Arginase family XCC3931 PF02223 Thymidylate kinase XCC3932 PF12833 Helix-turn-helix domain XCC3932 PF02311 AraC-like ligand binding domain XCC3937 PF03309 Type III pantothenate kinase XCC3938 PF08279 HTH domain XCC3938 PF02237 Biotin protein ligase C terminal domain XCC3938 PF03099 Biotin/lipoate A/B protein ligase family XCC3939 PF06167 Glucose-regulated metallo-peptidase M90 XCC3942 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC3943 PF00072 Response regulator receiver domain XCC3943 PF00486 Transcriptional regulatory protein, C terminal XCC3945 PF01207 Dihydrouridine synthase (Dus) XCC3949 PF00199 Catalase XCC3949 PF06628 Catalase-related immune-responsive XCC3950 PF13307 Helicase C-terminal domain XCC3950 PF06733 DEAD_2 XCC3953 PF08501 Shikimate dehydrogenase substrate binding domain XCC3953 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XCC3953 PF01488 Shikimate / quinate 5-dehydrogenase XCC3955 PF00175 Oxidoreductase NAD-binding domain XCC3955 PF00667 FAD binding domain XCC3955 PF00258 Flavodoxin XCC3956 PF00490 Delta-aminolevulinic acid dehydratase XCC3961 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XCC3961 PF00326 Prolyl oligopeptidase family XCC3962 PF02798 Glutathione S-transferase, N-terminal domain XCC3962 PF00043 Glutathione S-transferase, C-terminal domain XCC3966 PF04820 Tryptophan halogenase XCC3969 PF00005 ABC transporter XCC3971 PF01381 Helix-turn-helix XCC3973 PF02583 Metal-sensitive transcriptional repressor XCC3974 PF01545 Cation efflux family XCC3975 PF01229 Glycosyl hydrolases family 39 XCC3976 PF00005 ABC transporter XCC3977 PF00175 Oxidoreductase NAD-binding domain XCC3977 PF01383 CpcD/allophycocyanin linker domain XCC3978 PF01061 ABC-2 type transporter XCC3980 PF02558 Ketopantoate reductase PanE/ApbA XCC3980 PF08546 Ketopantoate reductase PanE/ApbA C terminal XCC3982 PF03061 Thioesterase superfamily XCC3985 PF00268 Ribonucleotide reductase, small chain XCC3986 PF02867 Ribonucleotide reductase, barrel domain XCC3986 PF00317 Ribonucleotide reductase, all-alpha domain XCC3986 PF03477 ATP cone domain XCC3988 PF00583 Acetyltransferase (GNAT) family XCC3988 PF13380 CoA binding domain XCC3988 PF13607 Succinyl-CoA ligase like flavodoxin domain XCC3990 PF03448 MgtE intracellular N domain XCC3990 PF01769 Divalent cation transporter XCC3990 PF00571 CBS domain XCC3991 PF00194 Eukaryotic-type carbonic anhydrase XCC3992 PF00999 Sodium/hydrogen exchanger family XCC3992 PF02254 TrkA-N domain XCC3993 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XCC3993 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XCC3994 PF00723 Glycosyl hydrolases family 15 XCC3995 PF01451 Low molecular weight phosphotyrosine protein phosphatase XCC3997 PF05166 YcgL domain XCC3998 PF00109 Beta-ketoacyl synthase, N-terminal domain XCC3998 PF02801 Beta-ketoacyl synthase, C-terminal domain XCC4000 PF00535 Glycosyl transferase family 2 XCC4001 PF04820 Tryptophan halogenase XCC4009 PF07977 FabA-like domain XCC4012 PF00550 Phosphopantetheine attachment site XCC4013 PF04820 Tryptophan halogenase XCC4019 PF01218 Coproporphyrinogen III oxidase XCC4020 PF01612 3'-5' exonuclease XCC4020 PF00476 DNA polymerase family A XCC4020 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XCC4020 PF01367 5'-3' exonuclease, C-terminal SAM fold XCC4023 PF06812 ImpA, N-terminal, type VI secretion system XCC4025 PF14602 Hexapeptide repeat of succinyl-transferase XCC4025 PF12464 Maltose acetyltransferase XCC4026 PF13361 UvrD-like helicase C-terminal domain XCC4026 PF00580 UvrD/REP helicase N-terminal domain XCC4028 PF13091 PLD-like domain XCC4028 PF13396 Phospholipase_D-nuclease N-terminal XCC4029 PF03466 LysR substrate binding domain XCC4029 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC4030 PF03737 Aldolase/RraA XCC4031 PF04303 PrpF protein XCC4032 PF04909 Amidohydrolase XCC4033 PF00471 Ribosomal protein L33 XCC4034 PF00830 Ribosomal L28 family XCC4036 PF00873 AcrB/AcrD/AcrF family XCC4037 PF00529 HlyD membrane-fusion protein of T1SS XCC4037 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC4041 PF02527 rRNA small subunit methyltransferase G XCC4042 PF09423 PhoD-like phosphatase XCC4042 PF16655 PhoD-like phosphatase, N-terminal domain XCC4043 PF01648 4'-phosphopantetheinyl transferase superfamily XCC4044 PF04226 Transglycosylase associated protein XCC4053 PF00480 ROK family XCC4055 PF00639 PPIC-type PPIASE domain XCC4057 PF00474 Sodium:solute symporter family XCC4058 PF04341 Protein of unknown function, DUF485 XCC4060 PF00501 AMP-binding enzyme XCC4060 PF13193 AMP-binding enzyme C-terminal domain XCC4060 PF16177 Acetyl-coenzyme A synthetase N-terminus XCC4061 PF00072 Response regulator receiver domain XCC4061 PF00196 Bacterial regulatory proteins, luxR family XCC4064 PF04616 Glycosyl hydrolases family 43 XCC4064 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCC4065 PF00248 Aldo/keto reductase family XCC4068 PF01557 Fumarylacetoacetate (FAA) hydrolase family XCC4069 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCC4069 PF13378 Enolase C-terminal domain-like XCC4070 PF05336 L-rhamnose mutarotase XCC4071 PF07690 Major Facilitator Superfamily XCC4072 PF01614 Bacterial transcriptional regulator XCC4072 PF09339 IclR helix-turn-helix domain XCC4075 PF02659 Putative manganese efflux pump XCC4076 PF09456 RcsC Alpha-Beta-Loop (ABL) XCC4076 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC4076 PF00072 Response regulator receiver domain XCC4076 PF00512 His Kinase A (phospho-acceptor) domain XCC4077 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain XCC4077 PF06165 Glycosyltransferase family 36 XCC4080 PF13360 PQQ-like domain XCC4080 PF01011 PQQ enzyme repeat XCC4080 PF13570 PQQ-like domain XCC4084 PF04357 TamB, inner membrane protein subunit of TAM complex XCC4085 PF17243 POTRA domain TamA domain 1 XCC4085 PF01103 Surface antigen XCC4086 PF02092 Glycyl-tRNA synthetase beta subunit XCC4086 PF05746 DALR anticodon binding domain XCC4087 PF02091 Glycyl-tRNA synthetase alpha subunit XCC4088 PF00437 Type II/IV secretion system protein XCC4088 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XCC4089 PF00958 GMP synthase C terminal domain XCC4089 PF00117 Glutamine amidotransferase class-I XCC4091 PF00902 Sec-independent protein translocase protein (TatC) XCC4092 PF02416 mttA/Hcf106 family XCC4093 PF02416 mttA/Hcf106 family XCC4095 PF00762 Ferrochelatase XCC4096 PF12697 Alpha/beta hydrolase family XCC4098 PF04381 Putative exonuclease, RdgC XCC4099 PF01171 PP-loop family XCC4101 PF00356 Bacterial regulatory proteins, lacI family XCC4102 PF07477 Glycosyl hydrolase family 67 C-terminus XCC4102 PF03648 Glycosyl hydrolase family 67 N-terminus XCC4102 PF07488 Glycosyl hydrolase family 67 middle domain XCC4104 PF13378 Enolase C-terminal domain-like XCC4104 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XCC4105 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XCC4105 PF04616 Glycosyl hydrolases family 43 XCC4106 PF14310 Fibronectin type III-like domain XCC4106 PF01915 Glycosyl hydrolase family 3 C-terminal domain XCC4106 PF07691 PA14 domain XCC4106 PF00933 Glycosyl hydrolase family 3 N terminal domain XCC4107 PF01232 Mannitol dehydrogenase Rossmann domain XCC4107 PF08125 Mannitol dehydrogenase C-terminal domain XCC4113 PF08450 SMP-30/Gluconolactonase/LRE-like region XCC4115 PF00331 Glycosyl hydrolase family 10 XCC4116 PF16355 Domain of unknown function (DUF4982) XCC4116 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 XCC4116 PF00703 Glycosyl hydrolases family 2 XCC4116 PF02836 Glycosyl hydrolases family 2, TIM barrel domain XCC4116 PF02837 Glycosyl hydrolases family 2, sugar binding domain XCC4117 PF02614 Glucuronate isomerase XCC4118 PF03422 Carbohydrate binding module (family 6) XCC4118 PF00553 Cellulose binding domain XCC4118 PF00331 Glycosyl hydrolase family 10 XCC4122 PF04616 Glycosyl hydrolases family 43 XCC4127 PF00698 Acyl transferase domain XCC4127 PF08240 Alcohol dehydrogenase GroES-like domain XCC4127 PF00107 Zinc-binding dehydrogenase XCC4127 PF16197 Ketoacyl-synthetase C-terminal extension XCC4127 PF00109 Beta-ketoacyl synthase, N-terminal domain XCC4127 PF02801 Beta-ketoacyl synthase, C-terminal domain XCC4127 PF08659 KR domain XCC4127 PF00550 Phosphopantetheine attachment site XCC4127 PF14765 Polyketide synthase dehydratase XCC4128 PF01553 Acyltransferase XCC4129 PF00356 Bacterial regulatory proteins, lacI family XCC4133 PF04820 Tryptophan halogenase XCC4134 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XCC4135 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XCC4136 PF04337 Protein of unknown function, DUF480 XCC4138 PF13302 Acetyltransferase (GNAT) domain XCC4139 PF13361 UvrD-like helicase C-terminal domain XCC4139 PF00580 UvrD/REP helicase N-terminal domain XCC4140 PF01527 Transposase XCC4141 PF13333 Integrase core domain XCC4141 PF00665 Integrase core domain XCC4141 PF13276 HTH-like domain XCC4142 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) XCC4143 PF00265 Thymidine kinase XCC4144 PF01590 GAF domain XCC4144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XCC4144 PF00512 His Kinase A (phospho-acceptor) domain XCC4144 PF08446 PAS fold XCC4144 PF00360 Phytochrome region XCC4145 PF04349 Periplasmic glucan biosynthesis protein, MdoG XCC4147 PF06827 Zinc finger found in FPG and IleRS XCC4147 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XCC4147 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XCC4153 PF03594 Benzoate membrane transport protein XCC4154 PF13426 PAS domain XCC4154 PF08446 PAS fold XCC4154 PF00360 Phytochrome region XCC4154 PF01590 GAF domain XCC4155 PF01126 Heme oxygenase XCC4156 PF07690 Major Facilitator Superfamily XCC4157 PF01263 Aldose 1-epimerase XCC4159 PF02810 SEC-C motif XCC4161 PF01925 Sulfite exporter TauE/SafE XCC4162 PF07715 TonB-dependent Receptor Plug Domain XCC4162 PF00593 TonB dependent receptor XCC4166 PF01227 GTP cyclohydrolase I XCC4168 PF07869 Protein of unknown function (DUF1656) XCC4169 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XCC4169 PF00529 HlyD membrane-fusion protein of T1SS XCC4170 PF02321 Outer membrane efflux protein XCC4171 PF04632 Fusaric acid resistance protein family XCC4172 PF00083 Sugar (and other) transporter XCC4174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC4174 PF03466 LysR substrate binding domain XCC4175 PF00106 short chain dehydrogenase XCC4176 PF13396 Phospholipase_D-nuclease N-terminal XCC4176 PF13091 PLD-like domain XCC4184 PF05598 Transposase domain (DUF772) XCC4184 PF01609 Transposase DDE domain XCC4189 PF00849 RNA pseudouridylate synthase XCC4191 PF13614 AAA domain XCC4192 PF05598 Transposase domain (DUF772) XCC4197 PF01381 Helix-turn-helix XCC4198 PF13538 UvrD-like helicase C-terminal domain XCC4199 PF13361 UvrD-like helicase C-terminal domain XCC4199 PF12705 PD-(D/E)XK nuclease superfamily XCC4199 PF00580 UvrD/REP helicase N-terminal domain XCC4200 PF17946 RecC C-terminal domain XCC4207 PF00005 ABC transporter XCC4208 PF02405 Permease MlaE XCC4209 PF02470 MlaD protein XCC4210 PF05494 MlaC protein XCC4212 PF04333 MlaA lipoprotein XCC4213 PF00255 Glutathione peroxidase XCC4215 PF02646 RmuC family XCC4216 PF08240 Alcohol dehydrogenase GroES-like domain XCC4216 PF00107 Zinc-binding dehydrogenase XCC4217 PF03466 LysR substrate binding domain XCC4217 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XCC4220 PF13520 Amino acid permease XCC4222 PF07715 TonB-dependent Receptor Plug Domain XCC4222 PF00593 TonB dependent receptor XCC4223 PF10947 Protein of unknown function (DUF2628) XCC4224 PF00990 Diguanylate cyclase, GGDEF domain XCC4225 PF13556 PucR C-terminal helix-turn-helix domain XCC4225 PF05651 Putative sugar diacid recognition XCC4225 PF17853 GGDEF-like domain XCC4226 PF02595 Glycerate kinase family XCC4227 PF07690 Major Facilitator Superfamily XCC4231 PF17785 PUA-like domain XCC4231 PF10672 S-adenosylmethionine-dependent methyltransferase XCC4232 PF03741 Integral membrane protein TerC family XCC4233 PF01694 Rhomboid family XCC4234 PF03009 Glycerophosphoryl diester phosphodiesterase family XCC4236 PF01569 PAP2 superfamily XCC4237 PF00593 TonB dependent receptor XCC4238 PF12631 MnmE helical domain XCC4238 PF10396 GTP-binding protein TrmE N-terminus XCC4238 PF01926 50S ribosome-binding GTPase XCC4239 PF01522 Polysaccharide deacetylase XCC4240 PF14849 YidC periplasmic domain XCC4240 PF02096 60Kd inner membrane protein XCC4241 PF00825 Ribonuclease P XCC4242 PF00468 Ribosomal protein L34