XCC0001 SM00382 ATPases associated with a variety of cellular activities XCC0001 SM00760 Bacterial dnaA protein helix-turn-helix domain XCC0002 SM00480 DNA polymerase III beta subunit XCC0004 SM00387 Histidine kinase-like ATPases XCC0004 SM00433 TopoisomeraseII XCC0007 SM00028 Tetratricopeptide repeats XCC0014 SM00155 Phospholipase D. Active site motifs. XCC0015 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC0021 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCC0021 SM00245 tail specific protease XCC0029 SM00829 Enoylreductase XCC0054 SM00487 DEAD-like helicases superfamily XCC0054 SM00490 helicase superfamily c-terminal domain XCC0071 SM00421 helix_turn_helix, Lux Regulon XCC0104 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen XCC0109 SM00421 helix_turn_helix, Lux Regulon XCC0109 SM00448 cheY-homologous receiver domain XCC0114 SM00862 Transcriptional regulatory protein, C terminal XCC0133 SM00642 Alpha-amylase domain XCC0134 SM00642 Alpha-amylase domain XCC0135 SM00642 Alpha-amylase domain XCC0150 SM00354 helix_turn _helix lactose operon repressor XCC0157 SM00344 helix_turn_helix ASNC type XCC0161 SM00382 ATPases associated with a variety of cellular activities XCC0164 SM00382 ATPases associated with a variety of cellular activities XCC0175 SM00855 Phosphoglycerate mutase family XCC0176 SM00867 YceI-like domain XCC0177 SM00155 Phospholipase D. Active site motifs. XCC0179 SM00563 Phosphate acyltransferases XCC0181 SM00028 Tetratricopeptide repeats XCC0185 SM01230 XCC0185 XCC0186 SM00938 Nitrogen regulatory protein P-II XCC0188 SM00387 Histidine kinase-like ATPases XCC0188 SM00388 His Kinase A (phosphoacceptor) domain XCC0189 SM00382 ATPases associated with a variety of cellular activities XCC0189 SM00448 cheY-homologous receiver domain XCC0202 SM00450 Rhodanese Homology Domain XCC0228 SM00563 Phosphate acyltransferases XCC0235 SM00342 helix_turn_helix, arabinose operon control protein XCC0239 SM00100 Cyclic nucleotide-monophosphate binding domain XCC0239 SM00267 diguanylate cyclase XCC0244 SM00878 Biotin carboxylase C-terminal domain XCC0249 SM00953 XCC0249 XCC0257 SM00833 Cobalamin synthesis protein cobW C-terminal domain XCC0263 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC0270 SM00829 Enoylreductase XCC0275 SM00487 DEAD-like helicases superfamily XCC0275 SM00490 helicase superfamily c-terminal domain XCC0275 SM00847 Helicase associated domain (HA2) Add an annotation XCC0276 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC0276 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC0278 SM00095 Transthyretin XCC0290 SM00155 Phospholipase D. Active site motifs. XCC0311 SM00342 helix_turn_helix, arabinose operon control protein XCC0324 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC0350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCC0351 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC0355 SM00342 helix_turn_helix, arabinose operon control protein XCC0361 SM00420 helix_turn_helix, Deoxyribose operon repressor XCC0361 SM01134 XCC0361 XCC0364 SM00882 Coenzyme A transferase XCC0365 SM00882 Coenzyme A transferase XCC0369 SM00998 Adenylosuccinate lyase C-terminus XCC0373 SM00346 helix_turn_helix isocitrate lyase regulation XCC0374 SM00090 RIO-like kinase XCC0377 SM01228 XCC0377 XCC0388 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC0388 SM00876 Biotin and Thiamin Synthesis associated domain XCC0407 SM00267 diguanylate cyclase XCC0409 SM00642 Alpha-amylase domain XCC0410 SM00642 Alpha-amylase domain XCC0412 SM00642 Alpha-amylase domain XCC0414 SM00642 Alpha-amylase domain XCC0423 SM00822 XCC0423 XCC0425 SM00487 DEAD-like helicases superfamily XCC0425 SM00490 helicase superfamily c-terminal domain XCC0428 SM00326 Src homology 3 domains XCC0429 SM00861 Transketolase, pyrimidine binding domain XCC0435 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC0454 SM00271 DnaJ molecular chaperone homology domain XCC0458 SM00046 Diacylglycerol kinase catalytic domain (presumed) XCC0462 SM00487 DEAD-like helicases superfamily XCC0468 SM00903 Flavin reductase like domain XCC0472 SM00100 Cyclic nucleotide-monophosphate binding domain XCC0472 SM00419 helix_turn_helix, cAMP Regulatory protein XCC0483 SM00073 Histidine Phosphotransfer domain XCC0483 SM00387 Histidine kinase-like ATPases XCC0483 SM00388 His Kinase A (phosphoacceptor) domain XCC0483 SM00448 cheY-homologous receiver domain XCC0484 SM00052 Putative diguanylate phosphodiesterase XCC0484 SM00267 diguanylate cyclase XCC0484 SM00448 cheY-homologous receiver domain XCC0493 SM00563 Phosphate acyltransferases XCC0497 SM01209 XCC0497 XCC0497 SM01210 XCC0497 XCC0498 SM00798 AICARFT/IMPCHase bienzyme XCC0498 SM00851 MGS-like domain XCC0501 SM00195 Dual specificity phosphatase, catalytic domain XCC0505 SM00563 Phosphate acyltransferases XCC0510 SM00530 Helix-turn-helix XRE-family like proteins XCC0515 SM00878 Biotin carboxylase C-terminal domain XCC0522 SM00883 Chaperonin 10 Kd subunit XCC0524 SM00487 DEAD-like helicases superfamily XCC0524 SM00490 helicase superfamily c-terminal domain XCC0540 SM00986 Uracil DNA glycosylase superfamily XCC0540 SM00987 UreE urease accessory protein, C-terminal domain XCC0554 SM00382 ATPases associated with a variety of cellular activities XCC0556 SM00830 Chorismate mutase type II XCC0559 SM00710 Parallel beta-helix repeats XCC0563 SM00382 ATPases associated with a variety of cellular activities XCC0563 SM00448 cheY-homologous receiver domain XCC0567 SM00382 ATPases associated with a variety of cellular activities XCC0581 SM00825 Beta-ketoacyl synthase XCC0586 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC0590 SM00487 DEAD-like helicases superfamily XCC0590 SM00490 helicase superfamily c-terminal domain XCC0597 SM00116 Domain in cystathionine beta-synthase and other proteins. XCC0601 SM00382 ATPases associated with a variety of cellular activities XCC0619 SM00893 Electron transfer flavoprotein domain XCC0620 SM00893 Electron transfer flavoprotein domain XCC0627 SM00882 Coenzyme A transferase XCC0628 SM00882 Coenzyme A transferase XCC0634 SM00382 ATPases associated with a variety of cellular activities XCC0637 SM00528 Domain in histone-like proteins of HNS family XCC0644 SM00656 XCC0644 XCC0645 SM00656 XCC0645 XCC0656 SM01211 XCC0656 XCC0660 SM00382 ATPases associated with a variety of cellular activities XCC0672 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCC0672 SM00866 XCC0672 XCC0688 SM00382 ATPases associated with a variety of cellular activities XCC0700 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCC0705 SM00387 Histidine kinase-like ATPases XCC0705 SM00388 His Kinase A (phosphoacceptor) domain XCC0706 SM00448 cheY-homologous receiver domain XCC0706 SM00862 Transcriptional regulatory protein, C terminal XCC0729 SM00842 Cell division protein FtsA XCC0730 SM00864 Tubulin/FtsZ family, GTPase domain XCC0730 SM00865 Tubulin/FtsZ family, C-terminal domain XCC0734 SM00957 SecA DEAD-like domain XCC0734 SM00958 SecA preprotein cross-linking domain XCC0742 SM00829 Enoylreductase XCC0748 SM00642 Alpha-amylase domain XCC0752 SM00996 S-adenosyl-L-homocysteine hydrolase XCC0752 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XCC0773 SM00382 ATPases associated with a variety of cellular activities XCC0777 SM00382 ATPases associated with a variety of cellular activities XCC0779 SM00448 cheY-homologous receiver domain XCC0779 SM00862 Transcriptional regulatory protein, C terminal XCC0780 SM00387 Histidine kinase-like ATPases XCC0780 SM00388 His Kinase A (phosphoacceptor) domain XCC0791 SM00650 Ribosomal RNA adenine dimethylases XCC0803 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCC0803 SM00895 XCC0803 XCC0811 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC0820 SM00342 helix_turn_helix, arabinose operon control protein XCC0824 SM00448 cheY-homologous receiver domain XCC0825 SM00387 Histidine kinase-like ATPases XCC0825 SM00388 His Kinase A (phosphoacceptor) domain XCC0825 SM00448 cheY-homologous receiver domain XCC0826 SM00421 helix_turn_helix, Lux Regulon XCC0839 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XCC0839 SM00475 5'-3' exonuclease XCC0865 SM00852 Probable molybdopterin binding domain XCC0866 SM00028 Tetratricopeptide repeats XCC0867 SM00937 XCC0867 XCC0869 SM00028 Tetratricopeptide repeats XCC0873 SM01400 XCC0873 XCC0883 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XCC0883 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XCC0884 SM00649 Ribosomal protein L11/L12 XCC0889 SM00663 RNA polymerase I subunit A N-terminus XCC0892 SM00838 Elongation factor G C-terminus XCC0892 SM00889 Elongation factor G, domain IV XCC0894 SM01403 XCC0894 XCC0898 SM01382 XCC0898 XCC0898 SM01383 XCC0898 XCC0901 SM00322 K homology RNA-binding domain XCC0905 SM01374 XCC0905 XCC0906 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XCC0918 SM00363 S4 RNA-binding domain XCC0918 SM01390 XCC0918 XCC0919 SM00662 RNA polymerases D XCC0926 SM00838 Elongation factor G C-terminus XCC0934 SM00829 Enoylreductase XCC0937 SM00363 S4 RNA-binding domain XCC0943 SM00382 ATPases associated with a variety of cellular activities XCC0945 SM00829 Enoylreductase XCC0948 SM00855 Phosphoglycerate mutase family XCC0958 SM00014 Acid phosphatase homologues XCC0962 SM00091 PAS domain XCC0962 SM00387 Histidine kinase-like ATPases XCC0962 SM00388 His Kinase A (phosphoacceptor) domain XCC0963 SM00448 cheY-homologous receiver domain XCC0963 SM00862 Transcriptional regulatory protein, C terminal XCC0967 SM01329 XCC0967 XCC0976 SM00382 ATPases associated with a variety of cellular activities XCC0976 SM00994 ClpX C4-type zinc finger XCC0976 SM01086 C-terminal, D2-small domain, of ClpB protein XCC0977 SM00382 ATPases associated with a variety of cellular activities XCC0977 SM00464 Found in ATP-dependent protease La (LON) XCC0978 SM00411 bacterial (prokaryotic) histone like domain XCC0984 SM00257 Lysin motif XCC0985 SM00849 Metallo-beta-lactamase superfamily XCC0988 SM00479 XCC0988 XCC0989 SM00331 Sigma factor PP2C-like phosphatases XCC0989 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XCC0994 SM00849 Metallo-beta-lactamase superfamily XCC0995 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC1001 SM00382 ATPases associated with a variety of cellular activities XCC1003 SM00493 XCC1003 XCC1006 SM00460 Transglutaminase/protease-like homologues XCC1008 SM00382 ATPases associated with a variety of cellular activities XCC1017 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XCC1018 SM00822 XCC1018 XCC1020 SM00825 Beta-ketoacyl synthase XCC1027 SM00910 XCC1027 XCC1030 SM00382 ATPases associated with a variety of cellular activities XCC1039 SM01359 XCC1039 XCC1039 SM01360 XCC1039 XCC1040 SM01321 XCC1040 XCC1048 SM00271 DnaJ molecular chaperone homology domain XCC1049 SM00448 cheY-homologous receiver domain XCC1050 SM00244 prohibitin homologues XCC1051 SM00244 prohibitin homologues XCC1053 SM00788 Adenylosuccinate synthetase XCC1057 SM00822 XCC1057 XCC1075 SM00855 Phosphoglycerate mutase family XCC1086 SM00052 Putative diguanylate phosphodiesterase XCC1087 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCC1090 SM01217 XCC1090 XCC1091 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCC1092 SM01092 CO dehydrogenase flavoprotein C-terminal domain XCC1095 SM00974 XCC1095 XCC1101 SM00481 DNA polymerase alpha chain like domain XCC1108 SM00091 PAS domain XCC1108 SM00342 helix_turn_helix, arabinose operon control protein XCC1109 SM01060 XCC1109 XCC1120 SM00448 cheY-homologous receiver domain XCC1120 SM00862 Transcriptional regulatory protein, C terminal XCC1121 SM00387 Histidine kinase-like ATPases XCC1121 SM00388 His Kinase A (phosphoacceptor) domain XCC1128 SM00421 helix_turn_helix, Lux Regulon XCC1128 SM00448 cheY-homologous receiver domain XCC1131 SM00478 endonuclease III XCC1136 SM00244 prohibitin homologues XCC1154 SM00904 Riboflavin kinase XCC1164 SM00382 ATPases associated with a variety of cellular activities XCC1166 SM00862 Transcriptional regulatory protein, C terminal XCC1167 SM00342 helix_turn_helix, arabinose operon control protein XCC1175 SM00387 Histidine kinase-like ATPases XCC1175 SM00388 His Kinase A (phosphoacceptor) domain XCC1176 SM00387 Histidine kinase-like ATPases XCC1176 SM00388 His Kinase A (phosphoacceptor) domain XCC1176 SM00448 cheY-homologous receiver domain XCC1182 SM00387 Histidine kinase-like ATPases XCC1182 SM00388 His Kinase A (phosphoacceptor) domain XCC1182 SM00448 cheY-homologous receiver domain XCC1184 SM00138 Methyltransferase, chemotaxis proteins XCC1185 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC1185 SM00387 Histidine kinase-like ATPases XCC1185 SM00388 His Kinase A (phosphoacceptor) domain XCC1185 SM00448 cheY-homologous receiver domain XCC1186 SM00387 Histidine kinase-like ATPases XCC1186 SM00388 His Kinase A (phosphoacceptor) domain XCC1187 SM00448 cheY-homologous receiver domain XCC1191 SM00813 Alpha-L-arabinofuranosidase C-terminus XCC1194 SM00382 ATPases associated with a variety of cellular activities XCC1194 SM00962 SRP54-type protein, GTPase domain XCC1194 SM00963 SRP54-type protein, helical bundle domain XCC1207 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XCC1207 SM00534 ATPase domain of DNA mismatch repair MUTS family XCC1236 SM00382 ATPases associated with a variety of cellular activities XCC1251 SM00812 Alpha-L-fucosidase XCC1259 SM00530 Helix-turn-helix XRE-family like proteins XCC1269 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCC1270 SM00838 Elongation factor G C-terminus XCC1273 SM00358 Double-stranded RNA binding motif XCC1273 SM00535 Ribonuclease III family XCC1276 SM00448 cheY-homologous receiver domain XCC1279 SM01118 XCC1279 XCC1286 SM00357 Cold shock protein domain XCC1289 SM00487 DEAD-like helicases superfamily XCC1289 SM00490 helicase superfamily c-terminal domain XCC1294 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC1294 SM00267 diguanylate cyclase XCC1298 SM00869 Autotransporter beta-domain XCC1299 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XCC1358 SM00481 DNA polymerase alpha chain like domain XCC1366 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCC1372 SM00267 diguanylate cyclase XCC1378 SM00972 Spore Coat Protein U domain XCC1381 SM00972 Spore Coat Protein U domain XCC1383 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCC1388 SM01172 XCC1388 XCC1389 SM00671 Sel1-like repeats. XCC1390 SM00710 Parallel beta-helix repeats XCC1390 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses XCC1395 SM00434 DNA Topoisomerase IV XCC1396 SM00342 helix_turn_helix, arabinose operon control protein XCC1397 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC1404 SM01217 XCC1404 XCC1405 SM00631 XCC1405 XCC1411 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC1415 SM00382 ATPases associated with a variety of cellular activities XCC1419 SM00947 Carbonic anhydrase XCC1422 SM00357 Cold shock protein domain XCC1441 SM00822 XCC1441 XCC1443 SM00267 diguanylate cyclase XCC1445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC1445 SM00267 diguanylate cyclase XCC1453 SM00487 DEAD-like helicases superfamily XCC1453 SM00490 helicase superfamily c-terminal domain XCC1475 SM00271 DnaJ molecular chaperone homology domain XCC1482 SM00382 ATPases associated with a variety of cellular activities XCC1487 SM00861 Transketolase, pyrimidine binding domain XCC1489 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCC1493 SM01091 Transporter associated domain XCC1499 SM00382 ATPases associated with a variety of cellular activities XCC1500 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCC1503 SM00984 UDP binding domain XCC1507 SM00354 helix_turn _helix lactose operon repressor XCC1511 SM01018 B12 binding domain XCC1513 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCC1517 SM00316 Ribosomal protein S1-like RNA-binding domain XCC1517 SM00357 Cold shock protein domain XCC1517 SM00955 XCC1517 XCC1519 SM00967 RNA 2'-O ribose methyltransferase substrate binding XCC1520 SM00267 diguanylate cyclase XCC1521 SM00479 XCC1521 XCC1524 SM00382 ATPases associated with a variety of cellular activities XCC1530 SM00947 Carbonic anhydrase XCC1532 SM00478 endonuclease III XCC1532 SM00525 XCC1532 XCC1537 SM00450 Rhodanese Homology Domain XCC1539 SM00644 XCC1539 XCC1544 SM00382 ATPases associated with a variety of cellular activities XCC1545 SM00981 XCC1545 XCC1551 SM00479 XCC1551 XCC1556 SM00947 Carbonic anhydrase XCC1568 SM00771 ZipA, C-terminal domain (FtsZ-binding) XCC1570 SM00292 breast cancer carboxy-terminal domain XCC1570 SM00532 Ligase N family XCC1574 SM00434 DNA Topoisomerase IV XCC1575 SM00564 beta-propeller repeat XCC1582 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCC1582 SM00866 XCC1582 XCC1585 SM00240 Forkhead associated domain XCC1590 SM00830 Chorismate mutase type II XCC1604 SM00530 Helix-turn-helix XRE-family like proteins XCC1630 SM00857 Resolvase, N terminal domain XCC1631 SM00966 SpoVT / AbrB like domain XCC1651 SM00477 DNA/RNA non-specific endonuclease XCC1651 SM00892 DNA/RNA non-specific endonuclease XCC1652 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC1652 SM00091 PAS domain XCC1652 SM00387 Histidine kinase-like ATPases XCC1652 SM00388 His Kinase A (phosphoacceptor) domain XCC1652 SM00448 cheY-homologous receiver domain XCC1653 SM00448 cheY-homologous receiver domain XCC1654 SM00382 ATPases associated with a variety of cellular activities XCC1655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC1655 SM00091 PAS domain XCC1655 SM00387 Histidine kinase-like ATPases XCC1655 SM00388 His Kinase A (phosphoacceptor) domain XCC1655 SM00448 cheY-homologous receiver domain XCC1656 SM00028 Tetratricopeptide repeats XCC1683 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC1684 SM00382 ATPases associated with a variety of cellular activities XCC1689 SM01091 Transporter associated domain XCC1695 SM00387 Histidine kinase-like ATPases XCC1695 SM00433 TopoisomeraseII XCC1700 SM01192 XCC1700 XCC1700 SM01193 XCC1700 XCC1705 SM00463 Small MutS-related domain XCC1709 SM00257 Lysin motif XCC1711 SM01103 XCC1711 XCC1713 SM00382 ATPases associated with a variety of cellular activities XCC1722 SM00382 ATPases associated with a variety of cellular activities XCC1724 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XCC1727 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC1727 SM00091 PAS domain XCC1727 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1737 SM00670 Large family of predicted nucleotide-binding domains XCC1741 SM01130 XCC1741 XCC1746 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCC1755 SM00758 XCC1755 XCC1763 SM00646 XCC1763 XCC1777 SM00052 Putative diguanylate phosphodiesterase XCC1777 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC1777 SM00267 diguanylate cyclase XCC1779 SM00448 cheY-homologous receiver domain XCC1780 SM00387 Histidine kinase-like ATPases XCC1782 SM00014 Acid phosphatase homologues XCC1794 SM00912 haemagglutination activity domain XCC1805 SM00100 Cyclic nucleotide-monophosphate binding domain XCC1805 SM00419 helix_turn_helix, cAMP Regulatory protein XCC1820 SM01007 Class II Aldolase and Adducin N-terminal domain XCC1830 SM00841 Elongation factor P, C-terminal XCC1830 SM01185 XCC1830 XCC1834 SM00899 XCC1834 XCC1841 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XCC1843 SM00851 MGS-like domain XCC1843 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XCC1851 SM00850 LytTr DNA-binding domain XCC1852 SM00937 XCC1852 XCC1854 SM00448 cheY-homologous receiver domain XCC1854 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCC1856 SM00073 Histidine Phosphotransfer domain XCC1856 SM00387 Histidine kinase-like ATPases XCC1856 SM00388 His Kinase A (phosphoacceptor) domain XCC1856 SM00448 cheY-homologous receiver domain XCC1861 SM00966 SpoVT / AbrB like domain XCC1865 SM00052 Putative diguanylate phosphodiesterase XCC1865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC1865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC1865 SM00091 PAS domain XCC1865 SM00267 diguanylate cyclase XCC1866 SM00448 cheY-homologous receiver domain XCC1868 SM00138 Methyltransferase, chemotaxis proteins XCC1869 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1869 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1871 SM00260 Two component signalling adaptor domain XCC1873 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1874 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1876 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1876 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1878 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1878 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1879 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1879 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1881 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1881 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1882 SM01049 XCC1882 XCC1884 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1884 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC1885 SM00073 Histidine Phosphotransfer domain XCC1885 SM00260 Two component signalling adaptor domain XCC1885 SM00387 Histidine kinase-like ATPases XCC1885 SM01231 XCC1885 XCC1886 SM00448 cheY-homologous receiver domain XCC1888 SM00260 Two component signalling adaptor domain XCC1903 SM00073 Histidine Phosphotransfer domain XCC1903 SM00260 Two component signalling adaptor domain XCC1903 SM00387 Histidine kinase-like ATPases XCC1903 SM01231 XCC1903 XCC1905 SM00448 cheY-homologous receiver domain XCC1908 SM00382 ATPases associated with a variety of cellular activities XCC1908 SM00962 SRP54-type protein, GTPase domain XCC1911 SM00052 Putative diguanylate phosphodiesterase XCC1911 SM00267 diguanylate cyclase XCC1912 SM00267 diguanylate cyclase XCC1913 SM00267 diguanylate cyclase XCC1923 SM00382 ATPases associated with a variety of cellular activities XCC1933 SM00382 ATPases associated with a variety of cellular activities XCC1934 SM00448 cheY-homologous receiver domain XCC1936 SM00421 helix_turn_helix, Lux Regulon XCC1936 SM00448 cheY-homologous receiver domain XCC1944 SM00047 Lysozyme subfamily 2 XCC1953 SM00260 Two component signalling adaptor domain XCC1953 SM00448 cheY-homologous receiver domain XCC1954 SM00858 XCC1954 XCC1957 SM00387 Histidine kinase-like ATPases XCC1958 SM00052 Putative diguanylate phosphodiesterase XCC1958 SM00267 diguanylate cyclase XCC1958 SM00448 cheY-homologous receiver domain XCC1959 SM00052 Putative diguanylate phosphodiesterase XCC1959 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC1959 SM00091 PAS domain XCC1959 SM00267 diguanylate cyclase XCC1960 SM00091 PAS domain XCC1960 SM00387 Histidine kinase-like ATPases XCC1962 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC1967 SM00382 ATPases associated with a variety of cellular activities XCC1967 SM01086 C-terminal, D2-small domain, of ClpB protein XCC1968 SM00316 Ribosomal protein S1-like RNA-binding domain XCC1972 SM00382 ATPases associated with a variety of cellular activities XCC1972 SM00843 XCC1972 XCC1976 SM00382 ATPases associated with a variety of cellular activities XCC1981 SM00562 XCC1981 XCC1983 SM00028 Tetratricopeptide repeats XCC1986 SM00564 beta-propeller repeat XCC1987 SM00382 ATPases associated with a variety of cellular activities XCC1988 SM00852 Probable molybdopterin binding domain XCC1989 SM00450 Rhodanese Homology Domain XCC2000 SM00852 Probable molybdopterin binding domain XCC2004 SM00448 cheY-homologous receiver domain XCC2004 SM01012 XCC2004 XCC2009 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XCC2012 SM00858 XCC2012 XCC2023 SM00052 Putative diguanylate phosphodiesterase XCC2024 SM00869 Autotransporter beta-domain XCC2025 SM00869 Autotransporter beta-domain XCC2030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC2030 SM00387 Histidine kinase-like ATPases XCC2030 SM00388 His Kinase A (phosphoacceptor) domain XCC2034 SM00318 Staphylococcal nuclease homologues XCC2047 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC2047 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2053 SM00448 cheY-homologous receiver domain XCC2054 SM00091 PAS domain XCC2054 SM00387 Histidine kinase-like ATPases XCC2055 SM01068 Putative carbohydrate binding domain XCC2083 SM00363 S4 RNA-binding domain XCC2084 SM00316 Ribosomal protein S1-like RNA-binding domain XCC2085 SM00421 helix_turn_helix, Lux Regulon XCC2085 SM00448 cheY-homologous receiver domain XCC2086 SM00450 Rhodanese Homology Domain XCC2090 SM00984 UDP binding domain XCC2092 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC2102 SM00974 XCC2102 XCC2107 SM01126 XCC2107 XCC2115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XCC2115 SM00465 GIY-YIG type nucleases (URI domain) XCC2117 SM00226 Low molecular weight phosphatase family XCC2120 SM00382 ATPases associated with a variety of cellular activities XCC2123 SM00849 Metallo-beta-lactamase superfamily XCC2125 SM00382 ATPases associated with a variety of cellular activities XCC2135 SM00382 ATPases associated with a variety of cellular activities XCC2152 SM00448 cheY-homologous receiver domain XCC2153 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC2153 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC2153 SM00091 PAS domain XCC2153 SM00387 Histidine kinase-like ATPases XCC2153 SM00388 His Kinase A (phosphoacceptor) domain XCC2153 SM00448 cheY-homologous receiver domain XCC2154 SM00316 Ribosomal protein S1-like RNA-binding domain XCC2154 SM00732 Likely ribonuclease with RNase H fold. XCC2168 SM00479 XCC2168 XCC2170 SM00529 Helix-turn-helix diphteria tox regulatory element XCC2178 SM00342 helix_turn_helix, arabinose operon control protein XCC2179 SM00387 Histidine kinase-like ATPases XCC2180 SM00421 helix_turn_helix, Lux Regulon XCC2180 SM00448 cheY-homologous receiver domain XCC2181 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2184 SM00116 Domain in cystathionine beta-synthase and other proteins. XCC2184 SM01240 XCC2184 XCC2189 SM00822 XCC2189 XCC2193 SM00411 bacterial (prokaryotic) histone like domain XCC2194 SM00316 Ribosomal protein S1-like RNA-binding domain XCC2209 SM00354 helix_turn _helix lactose operon repressor XCC2214 SM00363 S4 RNA-binding domain XCC2219 SM00382 ATPases associated with a variety of cellular activities XCC2227 SM00028 Tetratricopeptide repeats XCC2230 SM00382 ATPases associated with a variety of cellular activities XCC2231 SM00382 ATPases associated with a variety of cellular activities XCC2237 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCC2239 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XCC2243 SM00859 Semialdehyde dehydrogenase, NAD binding domain XCC2251 SM00840 XCC2251 XCC2256 SM01234 XCC2256 XCC2263 SM00849 Metallo-beta-lactamase superfamily XCC2272 SM00841 Elongation factor P, C-terminal XCC2272 SM01185 XCC2272 XCC2274 SM00052 Putative diguanylate phosphodiesterase XCC2274 SM00267 diguanylate cyclase XCC2274 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2281 SM00382 ATPases associated with a variety of cellular activities XCC2282 SM00487 DEAD-like helicases superfamily XCC2282 SM00490 helicase superfamily c-terminal domain XCC2287 SM00357 Cold shock protein domain XCC2289 SM01322 XCC2289 XCC2291 SM00052 Putative diguanylate phosphodiesterase XCC2291 SM00267 diguanylate cyclase XCC2294 SM00822 XCC2294 XCC2298 SM00853 MutL C terminal dimerisation domain XCC2298 SM01340 XCC2298 XCC2299 SM00646 XCC2299 XCC2306 SM00474 3'-5' exonuclease XCC2309 SM00528 Domain in histone-like proteins of HNS family XCC2313 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC2313 SM00267 diguanylate cyclase XCC2314 SM00260 Two component signalling adaptor domain XCC2315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC2315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2317 SM00487 DEAD-like helicases superfamily XCC2317 SM00490 helicase superfamily c-terminal domain XCC2328 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC2333 SM00116 Domain in cystathionine beta-synthase and other proteins. XCC2333 SM01091 Transporter associated domain XCC2340 SM00382 ATPases associated with a variety of cellular activities XCC2346 SM01230 XCC2346 XCC2348 SM01230 XCC2348 XCC2350 SM00267 diguanylate cyclase XCC2350 SM00448 cheY-homologous receiver domain XCC2360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC2360 SM00091 PAS domain XCC2360 SM00387 Histidine kinase-like ATPases XCC2360 SM00388 His Kinase A (phosphoacceptor) domain XCC2360 SM00448 cheY-homologous receiver domain XCC2360 SM01079 XCC2360 XCC2361 SM00448 cheY-homologous receiver domain XCC2361 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCC2364 SM00342 helix_turn_helix, arabinose operon control protein XCC2369 SM00354 helix_turn _helix lactose operon repressor XCC2377 SM01323 XCC2377 XCC2380 SM00344 helix_turn_helix ASNC type XCC2393 SM00387 Histidine kinase-like ATPases XCC2411 SM01130 XCC2411 XCC2416 SM00342 helix_turn_helix, arabinose operon control protein XCC2417 SM00382 ATPases associated with a variety of cellular activities XCC2417 SM00962 SRP54-type protein, GTPase domain XCC2417 SM00963 SRP54-type protein, helical bundle domain XCC2418 SM00478 endonuclease III XCC2421 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC2421 SM00091 PAS domain XCC2421 SM00387 Histidine kinase-like ATPases XCC2421 SM00388 His Kinase A (phosphoacceptor) domain XCC2421 SM00448 cheY-homologous receiver domain XCC2426 SM00091 PAS domain XCC2426 SM00387 Histidine kinase-like ATPases XCC2426 SM00388 His Kinase A (phosphoacceptor) domain XCC2426 SM00448 cheY-homologous receiver domain XCC2427 SM00465 GIY-YIG type nucleases (URI domain) XCC2433 SM00507 HNH nucleases XCC2434 SM00861 Transketolase, pyrimidine binding domain XCC2439 SM00849 Metallo-beta-lactamase superfamily XCC2456 SM00422 helix_turn_helix, mercury resistance XCC2457 SM00411 bacterial (prokaryotic) histone like domain XCC2458 SM00873 B3/4 domain XCC2458 SM00874 tRNA synthetase B5 domain XCC2458 SM00896 Ferredoxin-fold anticodon binding domain XCC2463 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XCC2464 SM00354 helix_turn _helix lactose operon repressor XCC2465 SM00642 Alpha-amylase domain XCC2471 SM00642 Alpha-amylase domain XCC2474 SM00382 ATPases associated with a variety of cellular activities XCC2485 SM00487 DEAD-like helicases superfamily XCC2485 SM00490 helicase superfamily c-terminal domain XCC2503 SM01001 AIR carboxylase XCC2507 SM00316 Ribosomal protein S1-like RNA-binding domain XCC2507 SM00322 K homology RNA-binding domain XCC2508 SM01387 XCC2508 XCC2512 SM00316 Ribosomal protein S1-like RNA-binding domain XCC2512 SM00322 K homology RNA-binding domain XCC2522 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCC2523 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XCC2532 SM00822 XCC2532 XCC2536 SM00052 Putative diguanylate phosphodiesterase XCC2536 SM00267 diguanylate cyclase XCC2536 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2549 SM00859 Semialdehyde dehydrogenase, NAD binding domain XCC2557 SM00257 Lysin motif XCC2564 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC2565 SM00369 Leucine-rich repeats, typical (most populated) subfamily XCC2577 SM01160 XCC2577 XCC2590 SM00382 ATPases associated with a variety of cellular activities XCC2590 SM00448 cheY-homologous receiver domain XCC2592 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2592 SM00387 Histidine kinase-like ATPases XCC2592 SM00388 His Kinase A (phosphoacceptor) domain XCC2597 SM00098 Alkaline phosphatase homologues XCC2598 SM00977 TilS substrate C-terminal domain XCC2602 SM01351 XCC2602 XCC2609 SM00316 Ribosomal protein S1-like RNA-binding domain XCC2628 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCC2633 SM00382 ATPases associated with a variety of cellular activities XCC2640 SM00363 S4 RNA-binding domain XCC2641 SM00052 Putative diguanylate phosphodiesterase XCC2641 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC2641 SM00091 PAS domain XCC2641 SM00267 diguanylate cyclase XCC2642 SM00487 DEAD-like helicases superfamily XCC2642 SM00490 helicase superfamily c-terminal domain XCC2652 SM00342 helix_turn_helix, arabinose operon control protein XCC2652 SM00478 endonuclease III XCC2652 SM01009 AlkA N-terminal domain XCC2659 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC2664 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XCC2664 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCC2676 SM00342 helix_turn_helix, arabinose operon control protein XCC2694 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2694 SM00387 Histidine kinase-like ATPases XCC2694 SM00388 His Kinase A (phosphoacceptor) domain XCC2695 SM00448 cheY-homologous receiver domain XCC2695 SM00862 Transcriptional regulatory protein, C terminal XCC2698 SM00487 DEAD-like helicases superfamily XCC2698 SM00490 helicase superfamily c-terminal domain XCC2698 SM00982 XCC2698 XCC2698 SM01058 CarD-like/TRCF domain XCC2700 SM00073 Histidine Phosphotransfer domain XCC2700 SM00260 Two component signalling adaptor domain XCC2700 SM00387 Histidine kinase-like ATPases XCC2700 SM01231 XCC2700 XCC2701 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC2701 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC2702 SM00260 Two component signalling adaptor domain XCC2703 SM00052 Putative diguanylate phosphodiesterase XCC2703 SM00448 cheY-homologous receiver domain XCC2704 SM00138 Methyltransferase, chemotaxis proteins XCC2705 SM00448 cheY-homologous receiver domain XCC2706 SM00155 Phospholipase D. Active site motifs. XCC2712 SM00855 Phosphoglycerate mutase family XCC2721 SM00248 ankyrin repeats XCC2727 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCC2728 SM01092 CO dehydrogenase flavoprotein C-terminal domain XCC2730 SM00829 Enoylreductase XCC2731 SM00267 diguanylate cyclase XCC2747 SM00732 Likely ribonuclease with RNase H fold. XCC2755 SM00382 ATPases associated with a variety of cellular activities XCC2758 SM00411 bacterial (prokaryotic) histone like domain XCC2764 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XCC2767 SM00382 ATPases associated with a variety of cellular activities XCC2773 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XCC2774 SM00671 Sel1-like repeats. XCC2797 SM00116 Domain in cystathionine beta-synthase and other proteins. XCC2801 SM00382 ATPases associated with a variety of cellular activities XCC2810 SM00924 MgtE intracellular N domain XCC2815 SM00656 XCC2815 XCC2818 SM00421 helix_turn_helix, Lux Regulon XCC2826 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCC2831 SM00422 helix_turn_helix, mercury resistance XCC2846 SM00387 Histidine kinase-like ATPases XCC2846 SM00388 His Kinase A (phosphoacceptor) domain XCC2846 SM00448 cheY-homologous receiver domain XCC2847 SM00387 Histidine kinase-like ATPases XCC2847 SM00388 His Kinase A (phosphoacceptor) domain XCC2847 SM00448 cheY-homologous receiver domain XCC2848 SM00387 Histidine kinase-like ATPases XCC2848 SM00388 His Kinase A (phosphoacceptor) domain XCC2848 SM00448 cheY-homologous receiver domain XCC2849 SM00867 YceI-like domain XCC2851 SM00867 YceI-like domain XCC2862 SM00116 Domain in cystathionine beta-synthase and other proteins. XCC2879 SM00244 prohibitin homologues XCC2888 SM00812 Alpha-L-fucosidase XCC2889 SM00636 XCC2889 XCC2892 SM00758 XCC2892 XCC2892 SM01217 XCC2892 XCC2893 SM01149 XCC2893 XCC2903 SM01040 BRO family, N-terminal domain XCC2905 SM00487 DEAD-like helicases superfamily XCC2915 SM00327 von Willebrand factor (vWF) type A domain XCC2921 SM00073 Histidine Phosphotransfer domain XCC2921 SM00260 Two component signalling adaptor domain XCC2921 SM00387 Histidine kinase-like ATPases XCC2921 SM00448 cheY-homologous receiver domain XCC2921 SM01231 XCC2921 XCC2922 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC2923 SM00260 Two component signalling adaptor domain XCC2924 SM00448 cheY-homologous receiver domain XCC2925 SM00448 cheY-homologous receiver domain XCC2930 SM00491 XCC2930 XCC2936 SM00954 Region found in RelA / SpoT proteins XCC2945 SM00382 ATPases associated with a variety of cellular activities XCC2945 SM00487 DEAD-like helicases superfamily XCC2945 SM00490 helicase superfamily c-terminal domain XCC2945 SM00847 Helicase associated domain (HA2) Add an annotation XCC2947 SM00341 Helicase and RNase D C-terminal XCC2947 SM00487 DEAD-like helicases superfamily XCC2947 SM00490 helicase superfamily c-terminal domain XCC2947 SM00956 XCC2947 XCC2949 SM00448 cheY-homologous receiver domain XCC2951 SM00363 S4 RNA-binding domain XCC2958 SM00448 cheY-homologous receiver domain XCC2959 SM00091 PAS domain XCC2959 SM00911 HWE histidine kinase XCC2997 SM00530 Helix-turn-helix XRE-family like proteins XCC3023 SM00382 ATPases associated with a variety of cellular activities XCC3025 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XCC3033 SM00834 Putative regulatory protein XCC3042 SM00382 ATPases associated with a variety of cellular activities XCC3056 SM00342 helix_turn_helix, arabinose operon control protein XCC3056 SM00871 Bacterial transcription activator, effector binding domain XCC3058 SM00855 Phosphoglycerate mutase family XCC3070 SM00382 ATPases associated with a variety of cellular activities XCC3070 SM01086 C-terminal, D2-small domain, of ClpB protein XCC3083 SM00564 beta-propeller repeat XCC3084 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC3084 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC3093 SM00881 CoA binding domain XCC3095 SM00387 Histidine kinase-like ATPases XCC3095 SM00388 His Kinase A (phosphoacceptor) domain XCC3096 SM00382 ATPases associated with a variety of cellular activities XCC3096 SM00448 cheY-homologous receiver domain XCC3106 SM00387 Histidine kinase-like ATPases XCC3106 SM00388 His Kinase A (phosphoacceptor) domain XCC3107 SM00448 cheY-homologous receiver domain XCC3107 SM00862 Transcriptional regulatory protein, C terminal XCC3109 SM00642 Alpha-amylase domain XCC3110 SM00528 Domain in histone-like proteins of HNS family XCC3120 SM00267 diguanylate cyclase XCC3143 SM00530 Helix-turn-helix XRE-family like proteins XCC3148 SM00869 Autotransporter beta-domain XCC3159 SM00354 helix_turn _helix lactose operon repressor XCC3165 SM00967 RNA 2'-O ribose methyltransferase substrate binding XCC3178 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC3178 SM00387 Histidine kinase-like ATPases XCC3184 SM00506 Appr-1"-p processing enzyme XCC3192 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XCC3197 SM00849 Metallo-beta-lactamase superfamily XCC3202 SM00382 ATPases associated with a variety of cellular activities XCC3203 SM00903 Flavin reductase like domain XCC3220 SM00861 Transketolase, pyrimidine binding domain XCC3223 SM00028 Tetratricopeptide repeats XCC3223 SM00327 von Willebrand factor (vWF) type A domain XCC3224 SM00327 von Willebrand factor (vWF) type A domain XCC3227 SM00382 ATPases associated with a variety of cellular activities XCC3228 SM00965 Secretin and TonB N terminus short domain XCC3238 SM00487 DEAD-like helicases superfamily XCC3238 SM00490 helicase superfamily c-terminal domain XCC3240 SM00858 XCC3240 XCC3242 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCC3245 SM01130 XCC3245 XCC3247 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCC3247 SM00954 Region found in RelA / SpoT proteins XCC3248 SM01409 XCC3248 XCC3249 SM00072 Guanylate kinase homologues. XCC3254 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC3259 SM01011 Aminopeptidase P, N-terminal domain XCC3273 SM00028 Tetratricopeptide repeats XCC3273 SM00421 helix_turn_helix, Lux Regulon XCC3289 SM00464 Found in ATP-dependent protease La (LON) XCC3317 SM00342 helix_turn_helix, arabinose operon control protein XCC3318 SM00862 Transcriptional regulatory protein, C terminal XCC3321 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC3327 SM00917 LeuA allosteric (dimerisation) domain XCC3328 SM01329 XCC3328 XCC3333 SM00267 diguanylate cyclase XCC3345 SM00919 Malic enzyme, NAD binding domain XCC3345 SM01274 XCC3345 XCC3348 SM00387 Histidine kinase-like ATPases XCC3348 SM00388 His Kinase A (phosphoacceptor) domain XCC3348 SM00448 cheY-homologous receiver domain XCC3349 SM00421 helix_turn_helix, Lux Regulon XCC3349 SM00448 cheY-homologous receiver domain XCC3351 SM00387 Histidine kinase-like ATPases XCC3351 SM00388 His Kinase A (phosphoacceptor) domain XCC3352 SM00448 cheY-homologous receiver domain XCC3352 SM00862 Transcriptional regulatory protein, C terminal XCC3356 SM00354 helix_turn _helix lactose operon repressor XCC3359 SM00642 Alpha-amylase domain XCC3361 SM01154 XCC3361 XCC3368 SM00450 Rhodanese Homology Domain XCC3386 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCC3389 SM00829 Enoylreductase XCC3394 SM00448 cheY-homologous receiver domain XCC3394 SM00862 Transcriptional regulatory protein, C terminal XCC3395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC3395 SM00387 Histidine kinase-like ATPases XCC3395 SM00388 His Kinase A (phosphoacceptor) domain XCC3409 SM00245 tail specific protease XCC3412 SM00354 helix_turn _helix lactose operon repressor XCC3414 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCC3414 SM00866 XCC3414 XCC3424 SM00382 ATPases associated with a variety of cellular activities XCC3429 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XCC3434 SM00387 Histidine kinase-like ATPases XCC3434 SM00388 His Kinase A (phosphoacceptor) domain XCC3434 SM00448 cheY-homologous receiver domain XCC3435 SM00448 cheY-homologous receiver domain XCC3436 SM00387 Histidine kinase-like ATPases XCC3436 SM00388 His Kinase A (phosphoacceptor) domain XCC3437 SM00749 bacterial OsmY and nodulation domain XCC3439 SM01350 XCC3439 XCC3450 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCC3450 SM00245 tail specific protease XCC3451 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC3456 SM00936 Penicillin-binding protein 5, C-terminal domain XCC3459 SM00710 Parallel beta-helix repeats XCC3470 SM00268 Actin XCC3472 SM00382 ATPases associated with a variety of cellular activities XCC3478 SM00062 Bacterial periplasmic substrate-binding proteins XCC3478 SM00248 ankyrin repeats XCC3482 SM00564 beta-propeller repeat XCC3485 SM01263 XCC3485 XCC3486 SM00267 diguanylate cyclase XCC3493 SM00382 ATPases associated with a variety of cellular activities XCC3493 SM01086 C-terminal, D2-small domain, of ClpB protein XCC3512 SM00448 cheY-homologous receiver domain XCC3512 SM00850 LytTr DNA-binding domain XCC3519 SM00267 diguanylate cyclase XCC3521 SM00637 XCC3521 XCC3522 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCC3522 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC3522 SM01049 XCC3522 XCC3523 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC3523 SM00091 PAS domain XCC3523 SM00267 diguanylate cyclase XCC3525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC3527 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XCC3527 SM01232 XCC3527 XCC3537 SM00062 Bacterial periplasmic substrate-binding proteins XCC3546 SM00267 diguanylate cyclase XCC3595 SM00965 Secretin and TonB N terminus short domain XCC3606 SM00867 YceI-like domain XCC3615 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XCC3617 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCC3617 SM00895 XCC3617 XCC3621 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCC3621 SM00331 Sigma factor PP2C-like phosphatases XCC3630 SM00382 ATPases associated with a variety of cellular activities XCC3630 SM00930 XCC3630 XCC3643 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCC3643 SM00091 PAS domain XCC3643 SM00387 Histidine kinase-like ATPases XCC3643 SM00388 His Kinase A (phosphoacceptor) domain XCC3643 SM00448 cheY-homologous receiver domain XCC3647 SM01005 Alanine racemase, C-terminal domain XCC3649 SM00344 helix_turn_helix ASNC type XCC3660 SM00382 ATPases associated with a variety of cellular activities XCC3663 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. XCC3664 SM00986 Uracil DNA glycosylase superfamily XCC3664 SM00987 UreE urease accessory protein, C-terminal domain XCC3665 SM00729 Elongator protein 3, MiaB family, Radical SAM XCC3676 SM00448 cheY-homologous receiver domain XCC3676 SM00850 LytTr DNA-binding domain XCC3677 SM00387 Histidine kinase-like ATPases XCC3686 SM00091 PAS domain XCC3686 SM00138 Methyltransferase, chemotaxis proteins XCC3686 SM00911 HWE histidine kinase XCC3687 SM00448 cheY-homologous receiver domain XCC3689 SM00382 ATPases associated with a variety of cellular activities XCC3689 SM00448 cheY-homologous receiver domain XCC3700 SM00382 ATPases associated with a variety of cellular activities XCC3709 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCC3717 SM00382 ATPases associated with a variety of cellular activities XCC3718 SM00631 XCC3718 XCC3721 SM00822 XCC3721 XCC3729 SM00267 diguanylate cyclase XCC3730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC3750 SM00257 Lysin motif XCC3755 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XCC3755 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XCC3755 SM00493 XCC3755 XCC3759 SM00091 PAS domain XCC3759 SM00267 diguanylate cyclase XCC3765 SM00487 DEAD-like helicases superfamily XCC3765 SM00490 helicase superfamily c-terminal domain XCC3772 SM00986 Uracil DNA glycosylase superfamily XCC3772 SM00987 UreE urease accessory protein, C-terminal domain XCC3773 SM00448 cheY-homologous receiver domain XCC3775 SM00382 ATPases associated with a variety of cellular activities XCC3776 SM00487 DEAD-like helicases superfamily XCC3776 SM00490 helicase superfamily c-terminal domain XCC3778 SM00357 Cold shock protein domain XCC3778 SM00382 ATPases associated with a variety of cellular activities XCC3778 SM00959 Rho termination factor, N-terminal domain XCC3784 SM00257 Lysin motif XCC3793 SM01150 XCC3793 XCC3805 SM00644 XCC3805 XCC3807 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCC3814 SM01217 XCC3814 XCC3815 SM00905 Dihydroneopterin aldolase XCC3820 SM00400 zinc finger XCC3820 SM00493 XCC3820 XCC3820 SM00766 DNA primase DnaG DnaB-binding XCC3841 SM00363 S4 RNA-binding domain XCC3850 SM00470 ParB-like nuclease domain XCC3855 SM01259 XCC3855 XCC3861 SM00836 DALR anticodon binding domain XCC3861 SM01016 Arginyl tRNA synthetase N terminal dom XCC3867 SM00823 Phosphopantetheine attachment site XCC3867 SM00824 Thioesterase XCC3872 SM00938 Nitrogen regulatory protein P-II XCC3874 SM00382 ATPases associated with a variety of cellular activities XCC3877 SM00052 Putative diguanylate phosphodiesterase XCC3881 SM00986 Uracil DNA glycosylase superfamily XCC3881 SM00987 UreE urease accessory protein, C-terminal domain XCC3882 SM00244 prohibitin homologues XCC3893 SM00448 cheY-homologous receiver domain XCC3893 SM00862 Transcriptional regulatory protein, C terminal XCC3894 SM00387 Histidine kinase-like ATPases XCC3894 SM00388 His Kinase A (phosphoacceptor) domain XCC3898 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCC3905 SM01060 XCC3905 XCC3909 SM00421 helix_turn_helix, Lux Regulon XCC3909 SM00448 cheY-homologous receiver domain XCC3912 SM00382 ATPases associated with a variety of cellular activities XCC3922 SM00849 Metallo-beta-lactamase superfamily XCC3927 SM00960 Roadblock/LC7 domain XCC3932 SM00342 helix_turn_helix, arabinose operon control protein XCC3942 SM00387 Histidine kinase-like ATPases XCC3942 SM00388 His Kinase A (phosphoacceptor) domain XCC3943 SM00448 cheY-homologous receiver domain XCC3943 SM00862 Transcriptional regulatory protein, C terminal XCC3948 SM00248 ankyrin repeats XCC3949 SM01060 XCC3949 XCC3950 SM00491 XCC3950 XCC3956 SM01004 Delta-aminolevulinic acid dehydratase XCC3965 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCC3969 SM00382 ATPases associated with a variety of cellular activities XCC3971 SM00530 Helix-turn-helix XRE-family like proteins XCC3976 SM00382 ATPases associated with a variety of cellular activities XCC3988 SM00881 CoA binding domain XCC3990 SM00116 Domain in cystathionine beta-synthase and other proteins. XCC3990 SM00924 MgtE intracellular N domain XCC3991 SM01057 Eukaryotic-type carbonic anhydrase XCC3996 SM00248 ankyrin repeats XCC3998 SM00825 Beta-ketoacyl synthase XCC4003 SM00822 XCC4003 XCC4010 SM00563 Phosphate acyltransferases XCC4020 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XCC4020 SM00474 3'-5' exonuclease XCC4020 SM00475 5'-3' exonuclease XCC4020 SM00482 DNA polymerase A domain XCC4025 SM01266 XCC4025 XCC4028 SM00155 Phospholipase D. Active site motifs. XCC4049 SM00248 ankyrin repeats XCC4050 SM00248 ankyrin repeats XCC4061 SM00421 helix_turn_helix, Lux Regulon XCC4061 SM00448 cheY-homologous receiver domain XCC4069 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCC4072 SM00346 helix_turn_helix isocitrate lyase regulation XCC4073 SM00342 helix_turn_helix, arabinose operon control protein XCC4076 SM00091 PAS domain XCC4076 SM00387 Histidine kinase-like ATPases XCC4076 SM00388 His Kinase A (phosphoacceptor) domain XCC4076 SM00448 cheY-homologous receiver domain XCC4080 SM00564 beta-propeller repeat XCC4086 SM00836 DALR anticodon binding domain XCC4088 SM00382 ATPases associated with a variety of cellular activities XCC4101 SM00354 helix_turn _helix lactose operon repressor XCC4104 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCC4106 SM00758 XCC4106 XCC4106 SM01217 XCC4106 XCC4112 SM00612 XCC4112 XCC4115 SM00633 Glycosyl hydrolase family 10 XCC4118 SM00633 Glycosyl hydrolase family 10 XCC4127 SM00829 Enoylreductase XCC4128 SM00563 Phosphate acyltransferases XCC4129 SM00354 helix_turn _helix lactose operon repressor XCC4134 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XCC4144 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC4144 SM00388 His Kinase A (phosphoacceptor) domain XCC4147 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XCC4147 SM01232 XCC4147 XCC4154 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC4154 SM00091 PAS domain XCC4167 SM00347 helix_turn_helix multiple antibiotic resistance protein XCC4176 SM00155 Phospholipase D. Active site motifs. XCC4186 SM00369 Leucine-rich repeats, typical (most populated) subfamily XCC4197 SM00530 Helix-turn-helix XRE-family like proteins XCC4201 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XCC4201 SM00736 Dystroglycan-type cadherin-like domains. XCC4201 SM00869 Autotransporter beta-domain XCC4207 SM00382 ATPases associated with a variety of cellular activities XCC4216 SM00829 Enoylreductase XCC4224 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCC4224 SM00091 PAS domain XCC4224 SM00267 diguanylate cyclase XCC4236 SM00014 Acid phosphatase homologues XCC4239 SM00028 Tetratricopeptide repeats