XCR_RS00005 SM00382 ATPases associated with a variety of cellular activities XCR_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain XCR_RS00010 SM00480 DNA polymerase III beta subunit XCR_RS00020 SM00387 Histidine kinase-like ATPases XCR_RS00020 SM00433 TopoisomeraseII XCR_RS00035 SM00028 Tetratricopeptide repeats XCR_RS00075 SM00155 Phospholipase D. Active site motifs. XCR_RS00080 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS00110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCR_RS00110 SM00245 tail specific protease XCR_RS00150 SM00829 Enoylreductase XCR_RS00270 SM00487 DEAD-like helicases superfamily XCR_RS00270 SM00490 helicase superfamily c-terminal domain XCR_RS00360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS00360 SM00091 PAS domain XCR_RS00360 SM00421 helix_turn_helix, Lux Regulon XCR_RS00535 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen XCR_RS00560 SM00421 helix_turn_helix, Lux Regulon XCR_RS00560 SM00448 cheY-homologous receiver domain XCR_RS00585 SM00862 Transcriptional regulatory protein, C terminal XCR_RS00710 SM00382 ATPases associated with a variety of cellular activities XCR_RS00720 SM00836 DALR anticodon binding domain XCR_RS00750 SM00564 beta-propeller repeat XCR_RS00775 SM00091 PAS domain XCR_RS00775 SM00387 Histidine kinase-like ATPases XCR_RS00775 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS00775 SM00448 cheY-homologous receiver domain XCR_RS00790 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS00795 SM00346 helix_turn_helix isocitrate lyase regulation XCR_RS00810 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCR_RS00865 SM00421 helix_turn_helix, Lux Regulon XCR_RS00865 SM00448 cheY-homologous receiver domain XCR_RS00920 SM00248 ankyrin repeats XCR_RS00925 SM00248 ankyrin repeats XCR_RS00930 SM00248 ankyrin repeats XCR_RS00935 SM00248 ankyrin repeats XCR_RS01045 SM00155 Phospholipase D. Active site motifs. XCR_RS01065 SM01266 XCR_RS01065 XCR_RS01085 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XCR_RS01085 SM00474 3'-5' exonuclease XCR_RS01085 SM00475 5'-3' exonuclease XCR_RS01085 SM00482 DNA polymerase A domain XCR_RS01135 SM00563 Phosphate acyltransferases XCR_RS01170 SM00822 XCR_RS01170 XCR_RS01195 SM00825 Beta-ketoacyl synthase XCR_RS01205 SM00248 ankyrin repeats XCR_RS01210 SM00226 Low molecular weight phosphatase family XCR_RS01230 SM01057 Eukaryotic-type carbonic anhydrase XCR_RS01235 SM00116 Domain in cystathionine beta-synthase and other proteins. XCR_RS01235 SM00924 MgtE intracellular N domain XCR_RS01245 SM00881 CoA binding domain XCR_RS01310 SM00382 ATPases associated with a variety of cellular activities XCR_RS01340 SM00530 Helix-turn-helix XRE-family like proteins XCR_RS01350 SM00382 ATPases associated with a variety of cellular activities XCR_RS01370 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCR_RS01415 SM01004 Delta-aminolevulinic acid dehydratase XCR_RS01445 SM00491 XCR_RS01445 XCR_RS01450 SM01060 XCR_RS01450 XCR_RS01455 SM00248 ankyrin repeats XCR_RS01480 SM00448 cheY-homologous receiver domain XCR_RS01480 SM00862 Transcriptional regulatory protein, C terminal XCR_RS01485 SM00387 Histidine kinase-like ATPases XCR_RS01485 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS01540 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS01570 SM00960 Roadblock/LC7 domain XCR_RS01600 SM00849 Metallo-beta-lactamase superfamily XCR_RS01640 SM00382 ATPases associated with a variety of cellular activities XCR_RS01655 SM00421 helix_turn_helix, Lux Regulon XCR_RS01655 SM00448 cheY-homologous receiver domain XCR_RS01670 SM01060 XCR_RS01670 XCR_RS01705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCR_RS01725 SM00387 Histidine kinase-like ATPases XCR_RS01725 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS01790 SM00244 prohibitin homologues XCR_RS01800 SM00986 Uracil DNA glycosylase superfamily XCR_RS01800 SM00987 UreE urease accessory protein, C-terminal domain XCR_RS01820 SM00052 Putative diguanylate phosphodiesterase XCR_RS01835 SM00382 ATPases associated with a variety of cellular activities XCR_RS01845 SM00938 Nitrogen regulatory protein P-II XCR_RS01870 SM00823 Phosphopantetheine attachment site XCR_RS01870 SM00824 Thioesterase XCR_RS01900 SM00836 DALR anticodon binding domain XCR_RS01900 SM01016 Arginyl tRNA synthetase N terminal dom XCR_RS01930 SM01259 XCR_RS01930 XCR_RS01955 SM00470 ParB-like nuclease domain XCR_RS02000 SM00363 S4 RNA-binding domain XCR_RS02105 SM00400 zinc finger XCR_RS02105 SM00493 XCR_RS02105 XCR_RS02105 SM00766 DNA primase DnaG DnaB-binding XCR_RS02130 SM00905 Dihydroneopterin aldolase XCR_RS02135 SM01217 XCR_RS02135 XCR_RS02170 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCR_RS02180 SM00644 XCR_RS02180 XCR_RS02240 SM01150 XCR_RS02240 XCR_RS02290 SM00257 Lysin motif XCR_RS02325 SM00357 Cold shock protein domain XCR_RS02325 SM00382 ATPases associated with a variety of cellular activities XCR_RS02325 SM00959 Rho termination factor, N-terminal domain XCR_RS02335 SM00487 DEAD-like helicases superfamily XCR_RS02335 SM00490 helicase superfamily c-terminal domain XCR_RS02340 SM00382 ATPases associated with a variety of cellular activities XCR_RS02350 SM00448 cheY-homologous receiver domain XCR_RS02355 SM00986 Uracil DNA glycosylase superfamily XCR_RS02355 SM00987 UreE urease accessory protein, C-terminal domain XCR_RS02390 SM00487 DEAD-like helicases superfamily XCR_RS02390 SM00490 helicase superfamily c-terminal domain XCR_RS02425 SM00091 PAS domain XCR_RS02425 SM00267 diguanylate cyclase XCR_RS02445 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XCR_RS02445 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XCR_RS02445 SM00493 XCR_RS02445 XCR_RS02470 SM00257 Lysin motif XCR_RS02555 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS02560 SM00267 diguanylate cyclase XCR_RS02600 SM00822 XCR_RS02600 XCR_RS02615 SM00631 XCR_RS02615 XCR_RS02620 SM00382 ATPases associated with a variety of cellular activities XCR_RS02660 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCR_RS02700 SM00382 ATPases associated with a variety of cellular activities XCR_RS02755 SM00382 ATPases associated with a variety of cellular activities XCR_RS02755 SM00448 cheY-homologous receiver domain XCR_RS02765 SM00448 cheY-homologous receiver domain XCR_RS02770 SM00091 PAS domain XCR_RS02770 SM00138 Methyltransferase, chemotaxis proteins XCR_RS02770 SM00911 HWE histidine kinase XCR_RS02815 SM00387 Histidine kinase-like ATPases XCR_RS02820 SM00448 cheY-homologous receiver domain XCR_RS02820 SM00850 LytTr DNA-binding domain XCR_RS02875 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS02880 SM00986 Uracil DNA glycosylase superfamily XCR_RS02880 SM00987 UreE urease accessory protein, C-terminal domain XCR_RS02885 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. XCR_RS02900 SM00382 ATPases associated with a variety of cellular activities XCR_RS02955 SM00344 helix_turn_helix ASNC type XCR_RS02965 SM01005 Alanine racemase, C-terminal domain XCR_RS02985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS02985 SM00091 PAS domain XCR_RS02985 SM00387 Histidine kinase-like ATPases XCR_RS02985 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS02985 SM00448 cheY-homologous receiver domain XCR_RS03050 SM00382 ATPases associated with a variety of cellular activities XCR_RS03050 SM00930 XCR_RS03050 XCR_RS03075 SM00986 Uracil DNA glycosylase superfamily XCR_RS03075 SM00987 UreE urease accessory protein, C-terminal domain XCR_RS03145 SM00382 ATPases associated with a variety of cellular activities XCR_RS03155 SM00830 Chorismate mutase type II XCR_RS03175 SM00387 Histidine kinase-like ATPases XCR_RS03180 SM00382 ATPases associated with a variety of cellular activities XCR_RS03180 SM00448 cheY-homologous receiver domain XCR_RS03200 SM00382 ATPases associated with a variety of cellular activities XCR_RS03270 SM00825 Beta-ketoacyl synthase XCR_RS03295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS03315 SM00487 DEAD-like helicases superfamily XCR_RS03315 SM00490 helicase superfamily c-terminal domain XCR_RS03350 SM00116 Domain in cystathionine beta-synthase and other proteins. XCR_RS03370 SM00382 ATPases associated with a variety of cellular activities XCR_RS03435 SM00893 Electron transfer flavoprotein domain XCR_RS03440 SM00893 Electron transfer flavoprotein domain XCR_RS03475 SM00882 Coenzyme A transferase XCR_RS03480 SM00882 Coenzyme A transferase XCR_RS03510 SM00382 ATPases associated with a variety of cellular activities XCR_RS03525 SM00528 Domain in histone-like proteins of HNS family XCR_RS03555 SM00656 XCR_RS03555 XCR_RS03560 SM00656 XCR_RS03560 XCR_RS03565 SM00656 XCR_RS03565 XCR_RS03625 SM01211 XCR_RS03625 XCR_RS03645 SM00382 ATPases associated with a variety of cellular activities XCR_RS03705 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCR_RS03705 SM00866 XCR_RS03705 XCR_RS03780 SM00028 Tetratricopeptide repeats XCR_RS03805 SM00382 ATPases associated with a variety of cellular activities XCR_RS03865 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCR_RS03895 SM00387 Histidine kinase-like ATPases XCR_RS03895 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS03900 SM00448 cheY-homologous receiver domain XCR_RS03900 SM00862 Transcriptional regulatory protein, C terminal XCR_RS04005 SM00842 Cell division protein FtsA XCR_RS04010 SM00864 Tubulin/FtsZ family, GTPase domain XCR_RS04010 SM00865 Tubulin/FtsZ family, C-terminal domain XCR_RS04030 SM00957 SecA DEAD-like domain XCR_RS04030 SM00958 SecA preprotein cross-linking domain XCR_RS04035 SM00869 Autotransporter beta-domain XCR_RS04075 SM00829 Enoylreductase XCR_RS04105 SM00642 Alpha-amylase domain XCR_RS04130 SM00996 S-adenosyl-L-homocysteine hydrolase XCR_RS04130 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XCR_RS04255 SM00382 ATPases associated with a variety of cellular activities XCR_RS04265 SM00448 cheY-homologous receiver domain XCR_RS04265 SM00862 Transcriptional regulatory protein, C terminal XCR_RS04270 SM00387 Histidine kinase-like ATPases XCR_RS04270 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS04325 SM00650 Ribosomal RNA adenine dimethylases XCR_RS04385 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCR_RS04385 SM00895 XCR_RS04385 XCR_RS04420 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS04470 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS04490 SM00448 cheY-homologous receiver domain XCR_RS04495 SM00387 Histidine kinase-like ATPases XCR_RS04495 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS04495 SM00448 cheY-homologous receiver domain XCR_RS04500 SM00421 helix_turn_helix, Lux Regulon XCR_RS04565 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XCR_RS04565 SM00475 5'-3' exonuclease XCR_RS04690 SM00852 Probable molybdopterin binding domain XCR_RS04695 SM00028 Tetratricopeptide repeats XCR_RS04700 SM00937 XCR_RS04700 XCR_RS04710 SM00028 Tetratricopeptide repeats XCR_RS04730 SM01400 XCR_RS04730 XCR_RS04780 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XCR_RS04780 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XCR_RS04785 SM00649 Ribosomal protein L11/L12 XCR_RS04810 SM00663 RNA polymerase I subunit A N-terminus XCR_RS04825 SM00838 Elongation factor G C-terminus XCR_RS04825 SM00889 Elongation factor G, domain IV XCR_RS04835 SM01403 XCR_RS04835 XCR_RS04855 SM01382 XCR_RS04855 XCR_RS04855 SM01383 XCR_RS04855 XCR_RS04870 SM00322 K homology RNA-binding domain XCR_RS04890 SM01374 XCR_RS04890 XCR_RS04895 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XCR_RS04955 SM00363 S4 RNA-binding domain XCR_RS04955 SM01390 XCR_RS04955 XCR_RS04960 SM00662 RNA polymerases D XCR_RS04995 SM00838 Elongation factor G C-terminus XCR_RS05035 SM00829 Enoylreductase XCR_RS05050 SM00363 S4 RNA-binding domain XCR_RS05080 SM00382 ATPases associated with a variety of cellular activities XCR_RS05090 SM00829 Enoylreductase XCR_RS05105 SM00855 Phosphoglycerate mutase family XCR_RS05160 SM00014 Acid phosphatase homologues XCR_RS05180 SM00091 PAS domain XCR_RS05180 SM00387 Histidine kinase-like ATPases XCR_RS05180 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS05185 SM00448 cheY-homologous receiver domain XCR_RS05185 SM00862 Transcriptional regulatory protein, C terminal XCR_RS05210 SM01329 XCR_RS05210 XCR_RS05255 SM00382 ATPases associated with a variety of cellular activities XCR_RS05255 SM00994 ClpX C4-type zinc finger XCR_RS05255 SM01086 C-terminal, D2-small domain, of ClpB protein XCR_RS05260 SM00382 ATPases associated with a variety of cellular activities XCR_RS05260 SM00464 Found in ATP-dependent protease La (LON) XCR_RS05265 SM00411 bacterial (prokaryotic) histone like domain XCR_RS05295 SM00257 Lysin motif XCR_RS05300 SM00849 Metallo-beta-lactamase superfamily XCR_RS05315 SM00479 XCR_RS05315 XCR_RS05320 SM00331 Sigma factor PP2C-like phosphatases XCR_RS05320 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain XCR_RS05345 SM00849 Metallo-beta-lactamase superfamily XCR_RS05350 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS05380 SM00382 ATPases associated with a variety of cellular activities XCR_RS05390 SM00493 XCR_RS05390 XCR_RS05405 SM00460 Transglutaminase/protease-like homologues XCR_RS05415 SM00382 ATPases associated with a variety of cellular activities XCR_RS05460 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XCR_RS05465 SM00822 XCR_RS05465 XCR_RS05475 SM00825 Beta-ketoacyl synthase XCR_RS05515 SM00382 ATPases associated with a variety of cellular activities XCR_RS05560 SM01359 XCR_RS05560 XCR_RS05560 SM01360 XCR_RS05560 XCR_RS05565 SM01321 XCR_RS05565 XCR_RS05605 SM00271 DnaJ molecular chaperone homology domain XCR_RS05610 SM00448 cheY-homologous receiver domain XCR_RS05615 SM00244 prohibitin homologues XCR_RS05620 SM00244 prohibitin homologues XCR_RS05630 SM00788 Adenylosuccinate synthetase XCR_RS05655 SM00822 XCR_RS05655 XCR_RS05730 SM00487 DEAD-like helicases superfamily XCR_RS05750 SM00855 Phosphoglycerate mutase family XCR_RS05810 SM00052 Putative diguanylate phosphodiesterase XCR_RS05815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCR_RS05825 SM01217 XCR_RS05825 XCR_RS05830 SM00829 Enoylreductase XCR_RS05855 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCR_RS05860 SM01092 CO dehydrogenase flavoprotein C-terminal domain XCR_RS05875 SM00974 XCR_RS05875 XCR_RS05905 SM00481 DNA polymerase alpha chain like domain XCR_RS05940 SM00091 PAS domain XCR_RS05940 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS05945 SM01060 XCR_RS05945 XCR_RS06010 SM00448 cheY-homologous receiver domain XCR_RS06010 SM00862 Transcriptional regulatory protein, C terminal XCR_RS06015 SM00387 Histidine kinase-like ATPases XCR_RS06015 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS06050 SM00421 helix_turn_helix, Lux Regulon XCR_RS06050 SM00448 cheY-homologous receiver domain XCR_RS06080 SM00478 endonuclease III XCR_RS06105 SM00244 prohibitin homologues XCR_RS06200 SM00904 Riboflavin kinase XCR_RS06250 SM00382 ATPases associated with a variety of cellular activities XCR_RS06260 SM00862 Transcriptional regulatory protein, C terminal XCR_RS06265 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS06305 SM00387 Histidine kinase-like ATPases XCR_RS06305 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS06310 SM00387 Histidine kinase-like ATPases XCR_RS06310 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS06310 SM00448 cheY-homologous receiver domain XCR_RS06340 SM00387 Histidine kinase-like ATPases XCR_RS06340 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS06340 SM00448 cheY-homologous receiver domain XCR_RS06350 SM00138 Methyltransferase, chemotaxis proteins XCR_RS06355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS06355 SM00387 Histidine kinase-like ATPases XCR_RS06355 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS06355 SM00448 cheY-homologous receiver domain XCR_RS06360 SM00091 PAS domain XCR_RS06360 SM00387 Histidine kinase-like ATPases XCR_RS06360 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS06365 SM00448 cheY-homologous receiver domain XCR_RS06385 SM00813 Alpha-L-arabinofuranosidase C-terminus XCR_RS06400 SM00382 ATPases associated with a variety of cellular activities XCR_RS06400 SM00962 SRP54-type protein, GTPase domain XCR_RS06400 SM00963 SRP54-type protein, helical bundle domain XCR_RS06465 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XCR_RS06465 SM00534 ATPase domain of DNA mismatch repair MUTS family XCR_RS06645 SM00382 ATPases associated with a variety of cellular activities XCR_RS06725 SM00812 Alpha-L-fucosidase XCR_RS06750 SM00530 Helix-turn-helix XRE-family like proteins XCR_RS06800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCR_RS06805 SM00838 Elongation factor G C-terminus XCR_RS06820 SM00358 Double-stranded RNA binding motif XCR_RS06820 SM00535 Ribonuclease III family XCR_RS06835 SM00448 cheY-homologous receiver domain XCR_RS06850 SM01118 XCR_RS06850 XCR_RS06885 SM00357 Cold shock protein domain XCR_RS06900 SM00487 DEAD-like helicases superfamily XCR_RS06900 SM00490 helicase superfamily c-terminal domain XCR_RS06930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS06930 SM00267 diguanylate cyclase XCR_RS06950 SM00869 Autotransporter beta-domain XCR_RS06955 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XCR_RS07265 SM00481 DNA polymerase alpha chain like domain XCR_RS07305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCR_RS07335 SM00267 diguanylate cyclase XCR_RS07360 SM00972 Spore Coat Protein U domain XCR_RS07375 SM00972 Spore Coat Protein U domain XCR_RS07385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCR_RS07410 SM00671 Sel1-like repeats. XCR_RS07415 SM01172 XCR_RS07415 XCR_RS07420 SM00710 Parallel beta-helix repeats XCR_RS07420 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses XCR_RS07445 SM00434 DNA Topoisomerase IV XCR_RS07450 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS07455 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS07490 SM01217 XCR_RS07490 XCR_RS07495 SM00631 XCR_RS07495 XCR_RS07525 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS07545 SM00382 ATPases associated with a variety of cellular activities XCR_RS07565 SM00947 Carbonic anhydrase XCR_RS07580 SM00357 Cold shock protein domain XCR_RS07675 SM00822 XCR_RS07675 XCR_RS07685 SM00267 diguanylate cyclase XCR_RS07695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS07695 SM00267 diguanylate cyclase XCR_RS07775 SM00271 DnaJ molecular chaperone homology domain XCR_RS07815 SM00382 ATPases associated with a variety of cellular activities XCR_RS07840 SM00861 Transketolase, pyrimidine binding domain XCR_RS07850 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCR_RS07900 SM00382 ATPases associated with a variety of cellular activities XCR_RS07905 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCR_RS07920 SM00984 UDP binding domain XCR_RS07940 SM00354 helix_turn _helix lactose operon repressor XCR_RS07960 SM01018 B12 binding domain XCR_RS07970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCR_RS07990 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS07990 SM00357 Cold shock protein domain XCR_RS07990 SM00955 XCR_RS07990 XCR_RS08000 SM00967 RNA 2'-O ribose methyltransferase substrate binding XCR_RS08005 SM00267 diguanylate cyclase XCR_RS08010 SM00479 XCR_RS08010 XCR_RS08025 SM00382 ATPases associated with a variety of cellular activities XCR_RS08060 SM00947 Carbonic anhydrase XCR_RS08070 SM00478 endonuclease III XCR_RS08070 SM00525 XCR_RS08070 XCR_RS08095 SM00450 Rhodanese Homology Domain XCR_RS08105 SM00644 XCR_RS08105 XCR_RS08130 SM00382 ATPases associated with a variety of cellular activities XCR_RS08135 SM00981 XCR_RS08135 XCR_RS08165 SM00479 XCR_RS08165 XCR_RS08190 SM00947 Carbonic anhydrase XCR_RS08245 SM00968 SMC proteins Flexible Hinge Domain XCR_RS08250 SM00771 ZipA, C-terminal domain (FtsZ-binding) XCR_RS08260 SM00292 breast cancer carboxy-terminal domain XCR_RS08260 SM00532 Ligase N family XCR_RS08280 SM00434 DNA Topoisomerase IV XCR_RS08285 SM00564 beta-propeller repeat XCR_RS08320 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCR_RS08320 SM00866 XCR_RS08320 XCR_RS08340 SM00240 Forkhead associated domain XCR_RS08360 SM00830 Chorismate mutase type II XCR_RS08400 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS08445 SM00477 DNA/RNA non-specific endonuclease XCR_RS08445 SM00892 DNA/RNA non-specific endonuclease XCR_RS08450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS08450 SM00091 PAS domain XCR_RS08450 SM00387 Histidine kinase-like ATPases XCR_RS08450 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS08450 SM00448 cheY-homologous receiver domain XCR_RS08455 SM00448 cheY-homologous receiver domain XCR_RS08460 SM00382 ATPases associated with a variety of cellular activities XCR_RS08465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS08465 SM00091 PAS domain XCR_RS08465 SM00387 Histidine kinase-like ATPases XCR_RS08465 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS08465 SM00448 cheY-homologous receiver domain XCR_RS08470 SM00028 Tetratricopeptide repeats XCR_RS08600 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS08610 SM00382 ATPases associated with a variety of cellular activities XCR_RS08635 SM01091 Transporter associated domain XCR_RS08665 SM00387 Histidine kinase-like ATPases XCR_RS08665 SM00433 TopoisomeraseII XCR_RS08690 SM01192 XCR_RS08690 XCR_RS08690 SM01193 XCR_RS08690 XCR_RS08715 SM00463 Small MutS-related domain XCR_RS08735 SM00257 Lysin motif XCR_RS08745 SM01103 XCR_RS08745 XCR_RS08755 SM00382 ATPases associated with a variety of cellular activities XCR_RS08805 SM00382 ATPases associated with a variety of cellular activities XCR_RS08815 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XCR_RS08830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS08830 SM00091 PAS domain XCR_RS08830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS08880 SM00670 Large family of predicted nucleotide-binding domains XCR_RS08900 SM01130 XCR_RS08900 XCR_RS08925 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCR_RS08970 SM00758 XCR_RS08970 XCR_RS09010 SM00646 XCR_RS09010 XCR_RS09075 SM00052 Putative diguanylate phosphodiesterase XCR_RS09075 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS09075 SM00267 diguanylate cyclase XCR_RS09085 SM00448 cheY-homologous receiver domain XCR_RS09090 SM00387 Histidine kinase-like ATPases XCR_RS09100 SM00014 Acid phosphatase homologues XCR_RS09160 SM00912 haemagglutination activity domain XCR_RS09235 SM00100 Cyclic nucleotide-monophosphate binding domain XCR_RS09235 SM00419 helix_turn_helix, cAMP Regulatory protein XCR_RS09310 SM01007 Class II Aldolase and Adducin N-terminal domain XCR_RS09360 SM00841 Elongation factor P, C-terminal XCR_RS09360 SM01185 XCR_RS09360 XCR_RS09380 SM00899 XCR_RS09380 XCR_RS09415 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XCR_RS09425 SM00851 MGS-like domain XCR_RS09425 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XCR_RS09465 SM00850 LytTr DNA-binding domain XCR_RS09470 SM00937 XCR_RS09470 XCR_RS09480 SM00448 cheY-homologous receiver domain XCR_RS09480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCR_RS09490 SM00073 Histidine Phosphotransfer domain XCR_RS09490 SM00387 Histidine kinase-like ATPases XCR_RS09490 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS09490 SM00448 cheY-homologous receiver domain XCR_RS09515 SM00966 SpoVT / AbrB like domain XCR_RS09535 SM00052 Putative diguanylate phosphodiesterase XCR_RS09535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS09535 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS09535 SM00091 PAS domain XCR_RS09535 SM00267 diguanylate cyclase XCR_RS09540 SM00448 cheY-homologous receiver domain XCR_RS09550 SM00138 Methyltransferase, chemotaxis proteins XCR_RS09555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09565 SM00260 Two component signalling adaptor domain XCR_RS09575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09605 SM01049 XCR_RS09605 XCR_RS09615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS09615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS09620 SM00073 Histidine Phosphotransfer domain XCR_RS09620 SM00260 Two component signalling adaptor domain XCR_RS09620 SM00387 Histidine kinase-like ATPases XCR_RS09620 SM01231 XCR_RS09620 XCR_RS09625 SM00448 cheY-homologous receiver domain XCR_RS09635 SM00260 Two component signalling adaptor domain XCR_RS09740 SM00073 Histidine Phosphotransfer domain XCR_RS09740 SM00260 Two component signalling adaptor domain XCR_RS09740 SM00387 Histidine kinase-like ATPases XCR_RS09740 SM01231 XCR_RS09740 XCR_RS09750 SM00448 cheY-homologous receiver domain XCR_RS09765 SM00382 ATPases associated with a variety of cellular activities XCR_RS09765 SM00962 SRP54-type protein, GTPase domain XCR_RS09780 SM00052 Putative diguanylate phosphodiesterase XCR_RS09780 SM00267 diguanylate cyclase XCR_RS09785 SM00267 diguanylate cyclase XCR_RS09790 SM00267 diguanylate cyclase XCR_RS09840 SM00382 ATPases associated with a variety of cellular activities XCR_RS09910 SM00822 XCR_RS09910 XCR_RS09915 SM00822 XCR_RS09915 XCR_RS09935 SM00382 ATPases associated with a variety of cellular activities XCR_RS09940 SM00448 cheY-homologous receiver domain XCR_RS09950 SM00421 helix_turn_helix, Lux Regulon XCR_RS09950 SM00448 cheY-homologous receiver domain XCR_RS09990 SM00047 Lysozyme subfamily 2 XCR_RS10035 SM00260 Two component signalling adaptor domain XCR_RS10035 SM00448 cheY-homologous receiver domain XCR_RS10040 SM00858 XCR_RS10040 XCR_RS10055 SM00387 Histidine kinase-like ATPases XCR_RS10060 SM00052 Putative diguanylate phosphodiesterase XCR_RS10060 SM00267 diguanylate cyclase XCR_RS10060 SM00448 cheY-homologous receiver domain XCR_RS10065 SM00091 PAS domain XCR_RS10065 SM00387 Histidine kinase-like ATPases XCR_RS10070 SM00052 Putative diguanylate phosphodiesterase XCR_RS10070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS10070 SM00091 PAS domain XCR_RS10070 SM00267 diguanylate cyclase XCR_RS10085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS10110 SM00382 ATPases associated with a variety of cellular activities XCR_RS10110 SM01086 C-terminal, D2-small domain, of ClpB protein XCR_RS10115 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS10135 SM00382 ATPases associated with a variety of cellular activities XCR_RS10135 SM00843 XCR_RS10135 XCR_RS10150 SM00382 ATPases associated with a variety of cellular activities XCR_RS10175 SM00562 XCR_RS10175 XCR_RS10185 SM00028 Tetratricopeptide repeats XCR_RS10200 SM00564 beta-propeller repeat XCR_RS10205 SM00382 ATPases associated with a variety of cellular activities XCR_RS10210 SM00852 Probable molybdopterin binding domain XCR_RS10215 SM00450 Rhodanese Homology Domain XCR_RS10270 SM00852 Probable molybdopterin binding domain XCR_RS10290 SM00448 cheY-homologous receiver domain XCR_RS10290 SM01012 XCR_RS10290 XCR_RS10315 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XCR_RS10330 SM00858 XCR_RS10330 XCR_RS10385 SM00052 Putative diguanylate phosphodiesterase XCR_RS10390 SM00869 Autotransporter beta-domain XCR_RS10395 SM00869 Autotransporter beta-domain XCR_RS10420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS10420 SM00387 Histidine kinase-like ATPases XCR_RS10420 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS10440 SM00318 Staphylococcal nuclease homologues XCR_RS10510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS10510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS10540 SM00448 cheY-homologous receiver domain XCR_RS10545 SM00091 PAS domain XCR_RS10545 SM00387 Histidine kinase-like ATPases XCR_RS10550 SM01068 Putative carbohydrate binding domain XCR_RS10640 SM00363 S4 RNA-binding domain XCR_RS10645 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS10655 SM00421 helix_turn_helix, Lux Regulon XCR_RS10655 SM00448 cheY-homologous receiver domain XCR_RS10660 SM00450 Rhodanese Homology Domain XCR_RS10680 SM00984 UDP binding domain XCR_RS10690 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS10715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XCR_RS10715 SM00465 GIY-YIG type nucleases (URI domain) XCR_RS10725 SM00226 Low molecular weight phosphatase family XCR_RS10740 SM00382 ATPases associated with a variety of cellular activities XCR_RS10755 SM00849 Metallo-beta-lactamase superfamily XCR_RS10765 SM00382 ATPases associated with a variety of cellular activities XCR_RS10815 SM00382 ATPases associated with a variety of cellular activities XCR_RS10900 SM00448 cheY-homologous receiver domain XCR_RS10905 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS10905 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS10905 SM00091 PAS domain XCR_RS10905 SM00387 Histidine kinase-like ATPases XCR_RS10905 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS10905 SM00448 cheY-homologous receiver domain XCR_RS10910 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS10910 SM00732 Likely ribonuclease with RNase H fold. XCR_RS10980 SM00479 XCR_RS10980 XCR_RS10990 SM00529 Helix-turn-helix diphteria tox regulatory element XCR_RS11030 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS11035 SM00387 Histidine kinase-like ATPases XCR_RS11040 SM00421 helix_turn_helix, Lux Regulon XCR_RS11040 SM00448 cheY-homologous receiver domain XCR_RS11045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS11060 SM00116 Domain in cystathionine beta-synthase and other proteins. XCR_RS11060 SM01240 XCR_RS11060 XCR_RS11085 SM00822 XCR_RS11085 XCR_RS11105 SM00411 bacterial (prokaryotic) histone like domain XCR_RS11110 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS11185 SM00354 helix_turn _helix lactose operon repressor XCR_RS11210 SM00363 S4 RNA-binding domain XCR_RS11235 SM00382 ATPases associated with a variety of cellular activities XCR_RS11275 SM00028 Tetratricopeptide repeats XCR_RS11290 SM00382 ATPases associated with a variety of cellular activities XCR_RS11295 SM00382 ATPases associated with a variety of cellular activities XCR_RS11325 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XCR_RS11335 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XCR_RS11355 SM00859 Semialdehyde dehydrogenase, NAD binding domain XCR_RS11395 SM00840 XCR_RS11395 XCR_RS11425 SM01234 XCR_RS11425 XCR_RS11460 SM00849 Metallo-beta-lactamase superfamily XCR_RS11505 SM00841 Elongation factor P, C-terminal XCR_RS11505 SM01185 XCR_RS11505 XCR_RS11515 SM00052 Putative diguanylate phosphodiesterase XCR_RS11515 SM00267 diguanylate cyclase XCR_RS11515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS11550 SM00382 ATPases associated with a variety of cellular activities XCR_RS11555 SM00487 DEAD-like helicases superfamily XCR_RS11555 SM00490 helicase superfamily c-terminal domain XCR_RS11580 SM00357 Cold shock protein domain XCR_RS11590 SM01322 XCR_RS11590 XCR_RS11600 SM00052 Putative diguanylate phosphodiesterase XCR_RS11600 SM00267 diguanylate cyclase XCR_RS11615 SM00822 XCR_RS11615 XCR_RS11635 SM00853 MutL C terminal dimerisation domain XCR_RS11635 SM01340 XCR_RS11635 XCR_RS11640 SM00646 XCR_RS11640 XCR_RS11675 SM00474 3'-5' exonuclease XCR_RS11690 SM00528 Domain in histone-like proteins of HNS family XCR_RS11715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS11715 SM00267 diguanylate cyclase XCR_RS11720 SM00260 Two component signalling adaptor domain XCR_RS11725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS11725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS11735 SM00487 DEAD-like helicases superfamily XCR_RS11735 SM00490 helicase superfamily c-terminal domain XCR_RS11795 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS11820 SM00116 Domain in cystathionine beta-synthase and other proteins. XCR_RS11820 SM01091 Transporter associated domain XCR_RS11855 SM00382 ATPases associated with a variety of cellular activities XCR_RS11890 SM01230 XCR_RS11890 XCR_RS11900 SM01230 XCR_RS11900 XCR_RS11910 SM00267 diguanylate cyclase XCR_RS11910 SM00448 cheY-homologous receiver domain XCR_RS11960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS11960 SM00091 PAS domain XCR_RS11960 SM00387 Histidine kinase-like ATPases XCR_RS11960 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS11960 SM00448 cheY-homologous receiver domain XCR_RS11960 SM01079 XCR_RS11960 XCR_RS11965 SM00448 cheY-homologous receiver domain XCR_RS11965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCR_RS11980 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS12005 SM00354 helix_turn _helix lactose operon repressor XCR_RS12085 SM01323 XCR_RS12085 XCR_RS12100 SM00344 helix_turn_helix ASNC type XCR_RS12170 SM00387 Histidine kinase-like ATPases XCR_RS12285 SM01130 XCR_RS12285 XCR_RS12310 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS12315 SM00382 ATPases associated with a variety of cellular activities XCR_RS12315 SM00962 SRP54-type protein, GTPase domain XCR_RS12315 SM00963 SRP54-type protein, helical bundle domain XCR_RS12320 SM00478 endonuclease III XCR_RS12335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS12335 SM00091 PAS domain XCR_RS12335 SM00387 Histidine kinase-like ATPases XCR_RS12335 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS12335 SM00448 cheY-homologous receiver domain XCR_RS12360 SM00091 PAS domain XCR_RS12360 SM00387 Histidine kinase-like ATPases XCR_RS12360 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS12360 SM00448 cheY-homologous receiver domain XCR_RS12365 SM00465 GIY-YIG type nucleases (URI domain) XCR_RS12430 SM00507 HNH nucleases XCR_RS12435 SM00861 Transketolase, pyrimidine binding domain XCR_RS12460 SM00849 Metallo-beta-lactamase superfamily XCR_RS12545 SM00422 helix_turn_helix, mercury resistance XCR_RS12550 SM00411 bacterial (prokaryotic) histone like domain XCR_RS12555 SM00873 B3/4 domain XCR_RS12555 SM00874 tRNA synthetase B5 domain XCR_RS12555 SM00896 Ferredoxin-fold anticodon binding domain XCR_RS12580 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XCR_RS12585 SM00354 helix_turn _helix lactose operon repressor XCR_RS12590 SM00642 Alpha-amylase domain XCR_RS12625 SM00642 Alpha-amylase domain XCR_RS12765 SM00487 DEAD-like helicases superfamily XCR_RS12765 SM00490 helicase superfamily c-terminal domain XCR_RS12840 SM01001 AIR carboxylase XCR_RS12860 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS12860 SM00322 K homology RNA-binding domain XCR_RS12865 SM01387 XCR_RS12865 XCR_RS12885 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS12885 SM00322 K homology RNA-binding domain XCR_RS12935 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCR_RS12940 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XCR_RS12985 SM00822 XCR_RS12985 XCR_RS13020 SM00052 Putative diguanylate phosphodiesterase XCR_RS13020 SM00267 diguanylate cyclase XCR_RS13020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS13085 SM00859 Semialdehyde dehydrogenase, NAD binding domain XCR_RS13125 SM00257 Lysin motif XCR_RS13160 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS13165 SM00530 Helix-turn-helix XRE-family like proteins XCR_RS13175 SM00966 SpoVT / AbrB like domain XCR_RS13220 SM00369 Leucine-rich repeats, typical (most populated) subfamily XCR_RS13280 SM01160 XCR_RS13280 XCR_RS13340 SM00098 Alkaline phosphatase homologues XCR_RS13345 SM00977 TilS substrate C-terminal domain XCR_RS13360 SM01351 XCR_RS13360 XCR_RS13395 SM00316 Ribosomal protein S1-like RNA-binding domain XCR_RS13490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XCR_RS13525 SM00382 ATPases associated with a variety of cellular activities XCR_RS13555 SM00363 S4 RNA-binding domain XCR_RS13560 SM00052 Putative diguanylate phosphodiesterase XCR_RS13560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS13560 SM00091 PAS domain XCR_RS13560 SM00267 diguanylate cyclase XCR_RS13565 SM00487 DEAD-like helicases superfamily XCR_RS13565 SM00490 helicase superfamily c-terminal domain XCR_RS13615 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS13615 SM00478 endonuclease III XCR_RS13615 SM01009 AlkA N-terminal domain XCR_RS13650 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS13675 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XCR_RS13675 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XCR_RS13730 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS13815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS13815 SM00387 Histidine kinase-like ATPases XCR_RS13815 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS13825 SM00448 cheY-homologous receiver domain XCR_RS13825 SM00862 Transcriptional regulatory protein, C terminal XCR_RS13840 SM00487 DEAD-like helicases superfamily XCR_RS13840 SM00490 helicase superfamily c-terminal domain XCR_RS13840 SM00982 XCR_RS13840 XCR_RS13840 SM01058 CarD-like/TRCF domain XCR_RS13850 SM00073 Histidine Phosphotransfer domain XCR_RS13850 SM00260 Two component signalling adaptor domain XCR_RS13850 SM00387 Histidine kinase-like ATPases XCR_RS13850 SM01231 XCR_RS13850 XCR_RS13855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS13855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS13860 SM00260 Two component signalling adaptor domain XCR_RS13865 SM00052 Putative diguanylate phosphodiesterase XCR_RS13865 SM00448 cheY-homologous receiver domain XCR_RS13870 SM00138 Methyltransferase, chemotaxis proteins XCR_RS13875 SM00448 cheY-homologous receiver domain XCR_RS13880 SM00155 Phospholipase D. Active site motifs. XCR_RS13895 SM00855 Phosphoglycerate mutase family XCR_RS13945 SM00248 ankyrin repeats XCR_RS13975 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XCR_RS13980 SM01092 CO dehydrogenase flavoprotein C-terminal domain XCR_RS13990 SM00829 Enoylreductase XCR_RS13995 SM00267 diguanylate cyclase XCR_RS14075 SM00732 Likely ribonuclease with RNase H fold. XCR_RS14115 SM00382 ATPases associated with a variety of cellular activities XCR_RS14130 SM00411 bacterial (prokaryotic) histone like domain XCR_RS14160 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain XCR_RS14175 SM00382 ATPases associated with a variety of cellular activities XCR_RS14205 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XCR_RS14210 SM00671 Sel1-like repeats. XCR_RS14270 SM00382 ATPases associated with a variety of cellular activities XCR_RS14330 SM00116 Domain in cystathionine beta-synthase and other proteins. XCR_RS14350 SM00382 ATPases associated with a variety of cellular activities XCR_RS14395 SM00924 MgtE intracellular N domain XCR_RS14425 SM00656 XCR_RS14425 XCR_RS14440 SM00421 helix_turn_helix, Lux Regulon XCR_RS14485 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XCR_RS14510 SM00422 helix_turn_helix, mercury resistance XCR_RS14585 SM00387 Histidine kinase-like ATPases XCR_RS14585 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS14585 SM00448 cheY-homologous receiver domain XCR_RS14590 SM00387 Histidine kinase-like ATPases XCR_RS14590 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS14590 SM00448 cheY-homologous receiver domain XCR_RS14595 SM00387 Histidine kinase-like ATPases XCR_RS14595 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS14595 SM00448 cheY-homologous receiver domain XCR_RS14600 SM00867 YceI-like domain XCR_RS14610 SM00867 YceI-like domain XCR_RS14665 SM00116 Domain in cystathionine beta-synthase and other proteins. XCR_RS14745 SM00244 prohibitin homologues XCR_RS14790 SM00812 Alpha-L-fucosidase XCR_RS14795 SM00636 XCR_RS14795 XCR_RS14810 SM00758 XCR_RS14810 XCR_RS14810 SM01217 XCR_RS14810 XCR_RS14815 SM01149 XCR_RS14815 XCR_RS14850 SM00327 von Willebrand factor (vWF) type A domain XCR_RS14880 SM00073 Histidine Phosphotransfer domain XCR_RS14880 SM00260 Two component signalling adaptor domain XCR_RS14880 SM00387 Histidine kinase-like ATPases XCR_RS14880 SM00448 cheY-homologous receiver domain XCR_RS14880 SM01231 XCR_RS14880 XCR_RS14885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS14890 SM00260 Two component signalling adaptor domain XCR_RS14895 SM00448 cheY-homologous receiver domain XCR_RS14900 SM00448 cheY-homologous receiver domain XCR_RS14930 SM00491 XCR_RS14930 XCR_RS14955 SM00954 Region found in RelA / SpoT proteins XCR_RS15000 SM00382 ATPases associated with a variety of cellular activities XCR_RS15000 SM00487 DEAD-like helicases superfamily XCR_RS15000 SM00490 helicase superfamily c-terminal domain XCR_RS15000 SM00847 Helicase associated domain (HA2) Add an annotation XCR_RS15010 SM00341 Helicase and RNase D C-terminal XCR_RS15010 SM00487 DEAD-like helicases superfamily XCR_RS15010 SM00490 helicase superfamily c-terminal domain XCR_RS15010 SM00956 XCR_RS15010 XCR_RS15020 SM00448 cheY-homologous receiver domain XCR_RS15030 SM00363 S4 RNA-binding domain XCR_RS15070 SM00448 cheY-homologous receiver domain XCR_RS15145 SM00382 ATPases associated with a variety of cellular activities XCR_RS15150 SM00860 SMI1 / KNR4 family XCR_RS15160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XCR_RS15205 SM00834 Putative regulatory protein XCR_RS15250 SM00382 ATPases associated with a variety of cellular activities XCR_RS15340 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS15340 SM00871 Bacterial transcription activator, effector binding domain XCR_RS15350 SM00855 Phosphoglycerate mutase family XCR_RS15415 SM00382 ATPases associated with a variety of cellular activities XCR_RS15415 SM01086 C-terminal, D2-small domain, of ClpB protein XCR_RS15485 SM00564 beta-propeller repeat XCR_RS15490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS15490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS15540 SM00881 CoA binding domain XCR_RS15550 SM00387 Histidine kinase-like ATPases XCR_RS15550 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS15555 SM00382 ATPases associated with a variety of cellular activities XCR_RS15555 SM00448 cheY-homologous receiver domain XCR_RS15610 SM00387 Histidine kinase-like ATPases XCR_RS15610 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS15615 SM00448 cheY-homologous receiver domain XCR_RS15615 SM00862 Transcriptional regulatory protein, C terminal XCR_RS15625 SM00642 Alpha-amylase domain XCR_RS15630 SM00528 Domain in histone-like proteins of HNS family XCR_RS15730 SM00974 XCR_RS15730 XCR_RS15735 SM00487 DEAD-like helicases superfamily XCR_RS15785 SM00869 Autotransporter beta-domain XCR_RS15835 SM00354 helix_turn _helix lactose operon repressor XCR_RS15840 SM00060 Fibronectin type 3 domain XCR_RS15865 SM00967 RNA 2'-O ribose methyltransferase substrate binding XCR_RS15935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS15935 SM00387 Histidine kinase-like ATPases XCR_RS15965 SM00506 Appr-1"-p processing enzyme XCR_RS16005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XCR_RS16030 SM00849 Metallo-beta-lactamase superfamily XCR_RS16045 SM00382 ATPases associated with a variety of cellular activities XCR_RS16050 SM00903 Flavin reductase like domain XCR_RS16110 SM00861 Transketolase, pyrimidine binding domain XCR_RS16125 SM00028 Tetratricopeptide repeats XCR_RS16125 SM00327 von Willebrand factor (vWF) type A domain XCR_RS16130 SM00327 von Willebrand factor (vWF) type A domain XCR_RS16145 SM00382 ATPases associated with a variety of cellular activities XCR_RS16150 SM00965 Secretin and TonB N terminus short domain XCR_RS16200 SM00487 DEAD-like helicases superfamily XCR_RS16200 SM00490 helicase superfamily c-terminal domain XCR_RS16210 SM00858 XCR_RS16210 XCR_RS16220 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCR_RS16235 SM01130 XCR_RS16235 XCR_RS16245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCR_RS16245 SM00954 Region found in RelA / SpoT proteins XCR_RS16250 SM01409 XCR_RS16250 XCR_RS16255 SM00072 Guanylate kinase homologues. XCR_RS16280 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS16305 SM01011 Aminopeptidase P, N-terminal domain XCR_RS16370 SM00028 Tetratricopeptide repeats XCR_RS16370 SM00421 helix_turn_helix, Lux Regulon XCR_RS16445 SM00464 Found in ATP-dependent protease La (LON) XCR_RS16500 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS16505 SM00862 Transcriptional regulatory protein, C terminal XCR_RS16520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS16550 SM00917 LeuA allosteric (dimerisation) domain XCR_RS16555 SM01329 XCR_RS16555 XCR_RS16580 SM00267 diguanylate cyclase XCR_RS16630 SM00919 Malic enzyme, NAD binding domain XCR_RS16630 SM01274 XCR_RS16630 XCR_RS16645 SM00387 Histidine kinase-like ATPases XCR_RS16645 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS16645 SM00448 cheY-homologous receiver domain XCR_RS16655 SM00421 helix_turn_helix, Lux Regulon XCR_RS16655 SM00448 cheY-homologous receiver domain XCR_RS16665 SM00387 Histidine kinase-like ATPases XCR_RS16665 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS16670 SM00448 cheY-homologous receiver domain XCR_RS16670 SM00862 Transcriptional regulatory protein, C terminal XCR_RS16690 SM00354 helix_turn _helix lactose operon repressor XCR_RS16705 SM00642 Alpha-amylase domain XCR_RS16715 SM01154 XCR_RS16715 XCR_RS16745 SM00450 Rhodanese Homology Domain XCR_RS16825 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCR_RS16840 SM00829 Enoylreductase XCR_RS16870 SM00448 cheY-homologous receiver domain XCR_RS16870 SM00862 Transcriptional regulatory protein, C terminal XCR_RS16875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS16875 SM00387 Histidine kinase-like ATPases XCR_RS16875 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS16945 SM00245 tail specific protease XCR_RS16960 SM00354 helix_turn _helix lactose operon repressor XCR_RS16970 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCR_RS16970 SM00866 XCR_RS16970 XCR_RS17020 SM00382 ATPases associated with a variety of cellular activities XCR_RS17045 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. XCR_RS17070 SM00387 Histidine kinase-like ATPases XCR_RS17070 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS17070 SM00448 cheY-homologous receiver domain XCR_RS17075 SM00448 cheY-homologous receiver domain XCR_RS17080 SM00387 Histidine kinase-like ATPases XCR_RS17080 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS17085 SM00749 bacterial OsmY and nodulation domain XCR_RS17095 SM01350 XCR_RS17095 XCR_RS17150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XCR_RS17150 SM00245 tail specific protease XCR_RS17155 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS17180 SM00936 Penicillin-binding protein 5, C-terminal domain XCR_RS17195 SM00710 Parallel beta-helix repeats XCR_RS17250 SM00268 Actin XCR_RS17260 SM00382 ATPases associated with a variety of cellular activities XCR_RS17285 SM00062 Bacterial periplasmic substrate-binding proteins XCR_RS17285 SM00248 ankyrin repeats XCR_RS17290 SM00564 beta-propeller repeat XCR_RS17305 SM01263 XCR_RS17305 XCR_RS17310 SM00267 diguanylate cyclase XCR_RS17345 SM00382 ATPases associated with a variety of cellular activities XCR_RS17345 SM01086 C-terminal, D2-small domain, of ClpB protein XCR_RS17440 SM00448 cheY-homologous receiver domain XCR_RS17440 SM00850 LytTr DNA-binding domain XCR_RS17475 SM00267 diguanylate cyclase XCR_RS17485 SM00637 XCR_RS17485 XCR_RS17490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS17490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS17490 SM01049 XCR_RS17490 XCR_RS17495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XCR_RS17495 SM00091 PAS domain XCR_RS17495 SM00267 diguanylate cyclase XCR_RS17505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS17515 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XCR_RS17515 SM01232 XCR_RS17515 XCR_RS17560 SM00062 Bacterial periplasmic substrate-binding proteins XCR_RS17600 SM00267 diguanylate cyclase XCR_RS17745 SM01321 XCR_RS17745 XCR_RS17760 SM01321 XCR_RS17760 XCR_RS17805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS17805 SM00331 Sigma factor PP2C-like phosphatases XCR_RS17825 SM00345 helix_turn_helix gluconate operon transcriptional repressor XCR_RS17825 SM00895 XCR_RS17825 XCR_RS17835 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XCR_RS17880 SM00867 YceI-like domain XCR_RS17940 SM00965 Secretin and TonB N terminus short domain XCR_RS18015 SM00883 Chaperonin 10 Kd subunit XCR_RS18050 SM00878 Biotin carboxylase C-terminal domain XCR_RS18075 SM00530 Helix-turn-helix XRE-family like proteins XCR_RS18100 SM00563 Phosphate acyltransferases XCR_RS18120 SM00195 Dual specificity phosphatase, catalytic domain XCR_RS18135 SM00798 AICARFT/IMPCHase bienzyme XCR_RS18135 SM00851 MGS-like domain XCR_RS18140 SM01209 XCR_RS18140 XCR_RS18140 SM01210 XCR_RS18140 XCR_RS18160 SM00563 Phosphate acyltransferases XCR_RS18205 SM00052 Putative diguanylate phosphodiesterase XCR_RS18205 SM00267 diguanylate cyclase XCR_RS18205 SM00448 cheY-homologous receiver domain XCR_RS18210 SM00073 Histidine Phosphotransfer domain XCR_RS18210 SM00387 Histidine kinase-like ATPases XCR_RS18210 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS18210 SM00448 cheY-homologous receiver domain XCR_RS18265 SM00100 Cyclic nucleotide-monophosphate binding domain XCR_RS18265 SM00419 helix_turn_helix, cAMP Regulatory protein XCR_RS18285 SM00903 Flavin reductase like domain XCR_RS18310 SM00046 Diacylglycerol kinase catalytic domain (presumed) XCR_RS18330 SM00271 DnaJ molecular chaperone homology domain XCR_RS18430 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS18460 SM00861 Transketolase, pyrimidine binding domain XCR_RS18465 SM00326 Src homology 3 domains XCR_RS18480 SM00487 DEAD-like helicases superfamily XCR_RS18480 SM00490 helicase superfamily c-terminal domain XCR_RS18490 SM00822 XCR_RS18490 XCR_RS18535 SM00642 Alpha-amylase domain XCR_RS18545 SM00642 Alpha-amylase domain XCR_RS18555 SM00642 Alpha-amylase domain XCR_RS18560 SM00642 Alpha-amylase domain XCR_RS18570 SM00267 diguanylate cyclase XCR_RS18665 SM00729 Elongator protein 3, MiaB family, Radical SAM XCR_RS18665 SM00876 Biotin and Thiamin Synthesis associated domain XCR_RS18720 SM01228 XCR_RS18720 XCR_RS18735 SM00090 RIO-like kinase XCR_RS18740 SM00346 helix_turn_helix isocitrate lyase regulation XCR_RS18760 SM00998 Adenylosuccinate lyase C-terminus XCR_RS18780 SM00882 Coenzyme A transferase XCR_RS18785 SM00882 Coenzyme A transferase XCR_RS18800 SM00420 helix_turn_helix, Deoxyribose operon repressor XCR_RS18800 SM01134 XCR_RS18800 XCR_RS18830 SM00342 helix_turn_helix, arabinose operon control protein XCR_RS18850 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS18855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XCR_RS18940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS19095 SM00155 Phospholipase D. Active site motifs. XCR_RS19160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XCR_RS19160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XCR_RS19165 SM00487 DEAD-like helicases superfamily XCR_RS19165 SM00490 helicase superfamily c-terminal domain XCR_RS19165 SM00847 Helicase associated domain (HA2) Add an annotation XCR_RS19190 SM00829 Enoylreductase XCR_RS19225 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS19255 SM00833 Cobalamin synthesis protein cobW C-terminal domain XCR_RS19295 SM00953 XCR_RS19295 XCR_RS19320 SM00878 Biotin carboxylase C-terminal domain XCR_RS19345 SM00100 Cyclic nucleotide-monophosphate binding domain XCR_RS19345 SM00267 diguanylate cyclase XCR_RS19410 SM00563 Phosphate acyltransferases XCR_RS19515 SM00382 ATPases associated with a variety of cellular activities XCR_RS19515 SM00448 cheY-homologous receiver domain XCR_RS19520 SM00387 Histidine kinase-like ATPases XCR_RS19520 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS19545 SM00450 Rhodanese Homology Domain XCR_RS19615 SM00382 ATPases associated with a variety of cellular activities XCR_RS19615 SM00448 cheY-homologous receiver domain XCR_RS19620 SM00387 Histidine kinase-like ATPases XCR_RS19620 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS19630 SM00938 Nitrogen regulatory protein P-II XCR_RS19635 SM01230 XCR_RS19635 XCR_RS19655 SM00028 Tetratricopeptide repeats XCR_RS19665 SM00563 Phosphate acyltransferases XCR_RS19675 SM00155 Phospholipase D. Active site motifs. XCR_RS19680 SM00867 YceI-like domain XCR_RS19685 SM00855 Phosphoglycerate mutase family XCR_RS19740 SM00382 ATPases associated with a variety of cellular activities XCR_RS19755 SM00382 ATPases associated with a variety of cellular activities XCR_RS19780 SM00344 helix_turn_helix ASNC type XCR_RS19815 SM00354 helix_turn _helix lactose operon repressor XCR_RS19885 SM00642 Alpha-amylase domain XCR_RS19890 SM00642 Alpha-amylase domain XCR_RS19895 SM00642 Alpha-amylase domain XCR_RS19975 SM00354 helix_turn _helix lactose operon repressor XCR_RS19990 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XCR_RS20000 SM00758 XCR_RS20000 XCR_RS20000 SM01217 XCR_RS20000 XCR_RS20040 SM00612 XCR_RS20040 XCR_RS20060 SM00633 Glycosyl hydrolase family 10 XCR_RS20075 SM00633 Glycosyl hydrolase family 10 XCR_RS20155 SM00829 Enoylreductase XCR_RS20160 SM00563 Phosphate acyltransferases XCR_RS20170 SM00354 helix_turn _helix lactose operon repressor XCR_RS20190 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XCR_RS20225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS20225 SM00388 His Kinase A (phosphoacceptor) domain XCR_RS20240 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XCR_RS20240 SM01232 XCR_RS20240 XCR_RS20275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS20275 SM00091 PAS domain XCR_RS20345 SM00347 helix_turn_helix multiple antibiotic resistance protein XCR_RS20390 SM00155 Phospholipase D. Active site motifs. XCR_RS20445 SM00530 Helix-turn-helix XRE-family like proteins XCR_RS20460 SM00487 DEAD-like helicases superfamily XCR_RS20460 SM00490 helicase superfamily c-terminal domain XCR_RS20500 SM00530 Helix-turn-helix XRE-family like proteins XCR_RS20520 SM00237 Domains in Na-Ca exchangers and integrin-beta4 XCR_RS20520 SM00736 Dystroglycan-type cadherin-like domains. XCR_RS20520 SM00869 Autotransporter beta-domain XCR_RS20550 SM00382 ATPases associated with a variety of cellular activities XCR_RS20600 SM00829 Enoylreductase XCR_RS20640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XCR_RS20640 SM00091 PAS domain XCR_RS20640 SM00267 diguanylate cyclase XCR_RS20710 SM00014 Acid phosphatase homologues XCR_RS20725 SM00028 Tetratricopeptide repeats