A9D66_RS00005	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A9D66_RS00010	SM00480	DNA polymerase III beta subunit
A9D66_RS00020	SM00387	Histidine kinase-like ATPases
A9D66_RS00020	SM00433	TopoisomeraseII
A9D66_RS00035	SM00028	Tetratricopeptide repeats
A9D66_RS00070	SM00155	Phospholipase D. Active site motifs.
A9D66_RS00085	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS00115	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9D66_RS00115	SM00245	tail specific protease
A9D66_RS00165	SM00829	Enoylreductase
A9D66_RS00295	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS00420	SM00487	DEAD-like helicases superfamily
A9D66_RS00420	SM00490	helicase superfamily c-terminal domain
A9D66_RS00450	SM00822	A9D66_RS00450
A9D66_RS00660	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
A9D66_RS00685	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS00685	SM00448	cheY-homologous receiver domain
A9D66_RS00705	SM00028	Tetratricopeptide repeats
A9D66_RS00705	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS00780	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS00785	SM00642	Alpha-amylase domain
A9D66_RS00790	SM00642	Alpha-amylase domain
A9D66_RS00795	SM00642	Alpha-amylase domain
A9D66_RS00845	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS00900	SM00344	helix_turn_helix ASNC type
A9D66_RS00920	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS00935	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS00975	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS01005	SM00855	Phosphoglycerate mutase family
A9D66_RS01010	SM00867	YceI-like domain 
A9D66_RS01015	SM00155	Phospholipase D. Active site motifs.
A9D66_RS01030	SM00563	Phosphate acyltransferases
A9D66_RS01045	SM00028	Tetratricopeptide repeats
A9D66_RS01055	SM00829	Enoylreductase
A9D66_RS01075	SM01230	A9D66_RS01075
A9D66_RS01080	SM00938	Nitrogen regulatory protein P-II
A9D66_RS01090	SM00387	Histidine kinase-like ATPases
A9D66_RS01090	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS01095	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS01095	SM00448	cheY-homologous receiver domain
A9D66_RS01160	SM00450	Rhodanese Homology Domain
A9D66_RS01205	SM00257	Lysin motif
A9D66_RS01210	SM00028	Tetratricopeptide repeats
A9D66_RS01290	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS01345	SM00387	Histidine kinase-like ATPases
A9D66_RS01345	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS01350	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS01350	SM00448	cheY-homologous receiver domain
A9D66_RS01465	SM00563	Phosphate acyltransferases
A9D66_RS01505	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS01530	SM00100	Cyclic nucleotide-monophosphate binding domain
A9D66_RS01530	SM00267	diguanylate cyclase
A9D66_RS01555	SM00878	Biotin carboxylase C-terminal domain
A9D66_RS01580	SM00953	A9D66_RS01580
A9D66_RS01620	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A9D66_RS01650	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS01685	SM00829	Enoylreductase
A9D66_RS01715	SM00487	DEAD-like helicases superfamily
A9D66_RS01715	SM00490	helicase superfamily c-terminal domain
A9D66_RS01715	SM00847	Helicase associated domain (HA2)  Add an annotation
A9D66_RS01850	SM00422	helix_turn_helix, mercury resistance
A9D66_RS01885	SM00448	cheY-homologous receiver domain
A9D66_RS01885	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS01890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS01890	SM00387	Histidine kinase-like ATPases
A9D66_RS01890	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS02075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9D66_RS02080	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS02100	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS02130	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9D66_RS02130	SM01134	A9D66_RS02130
A9D66_RS02145	SM00882	Coenzyme A transferase
A9D66_RS02150	SM00882	Coenzyme A transferase
A9D66_RS02170	SM00998	Adenylosuccinate lyase C-terminus
A9D66_RS02190	SM00346	helix_turn_helix isocitrate lyase regulation
A9D66_RS02195	SM00090	RIO-like kinase
A9D66_RS02210	SM01228	A9D66_RS02210
A9D66_RS02265	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS02265	SM00876	Biotin and Thiamin Synthesis associated domain
A9D66_RS02290	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A9D66_RS02395	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS02465	SM00267	diguanylate cyclase
A9D66_RS02475	SM00642	Alpha-amylase domain
A9D66_RS02480	SM00642	Alpha-amylase domain
A9D66_RS02490	SM00642	Alpha-amylase domain
A9D66_RS02500	SM00642	Alpha-amylase domain
A9D66_RS02530	SM00487	DEAD-like helicases superfamily
A9D66_RS02530	SM00490	helicase superfamily c-terminal domain
A9D66_RS02540	SM00326	Src homology 3 domains
A9D66_RS02545	SM00861	Transketolase, pyrimidine binding domain
A9D66_RS02555	SM00237	Domains in Na-Ca exchangers and integrin-beta4
A9D66_RS02575	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS02685	SM00271	DnaJ molecular chaperone homology domain
A9D66_RS02705	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9D66_RS02725	SM00903	Flavin reductase like domain
A9D66_RS02745	SM00100	Cyclic nucleotide-monophosphate binding domain
A9D66_RS02745	SM00419	helix_turn_helix, cAMP Regulatory protein
A9D66_RS02800	SM00387	Histidine kinase-like ATPases
A9D66_RS02800	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS02800	SM00448	cheY-homologous receiver domain
A9D66_RS02805	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS02805	SM00267	diguanylate cyclase
A9D66_RS02805	SM00448	cheY-homologous receiver domain
A9D66_RS02860	SM00563	Phosphate acyltransferases
A9D66_RS02885	SM01209	A9D66_RS02885
A9D66_RS02885	SM01210	A9D66_RS02885
A9D66_RS02895	SM00798	AICARFT/IMPCHase bienzyme
A9D66_RS02895	SM00851	MGS-like domain
A9D66_RS02910	SM00195	Dual specificity phosphatase, catalytic domain
A9D66_RS02930	SM00563	Phosphate acyltransferases
A9D66_RS02955	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS02990	SM00878	Biotin carboxylase C-terminal domain
A9D66_RS03020	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS03030	SM00234	in StAR and phosphatidylcholine transfer protein
A9D66_RS03060	SM00883	Chaperonin 10 Kd subunit
A9D66_RS03120	SM00944	Pro-kumamolisin, activation domain
A9D66_RS03135	SM00867	YceI-like domain 
A9D66_RS03190	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A9D66_RS03200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9D66_RS03200	SM00895	A9D66_RS03200
A9D66_RS03220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS03220	SM00331	Sigma factor PP2C-like phosphatases
A9D66_RS03330	SM00822	A9D66_RS03330
A9D66_RS03400	SM00267	diguanylate cyclase
A9D66_RS03435	SM00062	Bacterial periplasmic substrate-binding proteins
A9D66_RS03480	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9D66_RS03480	SM01232	A9D66_RS03480
A9D66_RS03500	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS03510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS03510	SM00091	PAS domain
A9D66_RS03510	SM00267	diguanylate cyclase
A9D66_RS03515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS03515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS03515	SM01049	A9D66_RS03515
A9D66_RS03520	SM00637	A9D66_RS03520
A9D66_RS03535	SM00267	diguanylate cyclase
A9D66_RS03570	SM00448	cheY-homologous receiver domain
A9D66_RS03570	SM00850	LytTr DNA-binding domain
A9D66_RS03655	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS03655	SM01086	C-terminal, D2-small domain, of ClpB protein
A9D66_RS03685	SM00267	diguanylate cyclase
A9D66_RS03690	SM01263	A9D66_RS03690
A9D66_RS03710	SM00564	beta-propeller repeat
A9D66_RS03715	SM00062	Bacterial periplasmic substrate-binding proteins
A9D66_RS03715	SM00248	ankyrin repeats
A9D66_RS03730	SM00829	Enoylreductase
A9D66_RS03740	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS03750	SM00268	Actin
A9D66_RS03775	SM00710	Parallel beta-helix repeats
A9D66_RS03795	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9D66_RS03815	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS03820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9D66_RS03820	SM00245	tail specific protease
A9D66_RS03875	SM01350	A9D66_RS03875
A9D66_RS03885	SM00749	bacterial OsmY and nodulation domain
A9D66_RS03890	SM00387	Histidine kinase-like ATPases
A9D66_RS03890	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS03895	SM00448	cheY-homologous receiver domain
A9D66_RS03900	SM00387	Histidine kinase-like ATPases
A9D66_RS03900	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS03900	SM00448	cheY-homologous receiver domain
A9D66_RS03935	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A9D66_RS03960	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS04030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9D66_RS04030	SM00866	A9D66_RS04030
A9D66_RS04040	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS04110	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS04115	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS04130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS04130	SM00387	Histidine kinase-like ATPases
A9D66_RS04130	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS04135	SM00448	cheY-homologous receiver domain
A9D66_RS04135	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS04155	SM00829	Enoylreductase
A9D66_RS04175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9D66_RS04195	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS04260	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A9D66_RS04290	SM00387	Histidine kinase-like ATPases
A9D66_RS04290	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS04295	SM00448	cheY-homologous receiver domain
A9D66_RS04295	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS04415	SM00842	Cell division protein FtsA
A9D66_RS04420	SM00864	Tubulin/FtsZ family, GTPase domain
A9D66_RS04420	SM00865	Tubulin/FtsZ family, C-terminal domain
A9D66_RS04440	SM00957	SecA DEAD-like domain
A9D66_RS04440	SM00958	SecA preprotein cross-linking domain
A9D66_RS04470	SM00829	Enoylreductase
A9D66_RS04475	SM00944	Pro-kumamolisin, activation domain
A9D66_RS04500	SM00642	Alpha-amylase domain
A9D66_RS04535	SM00996	S-adenosyl-L-homocysteine hydrolase
A9D66_RS04535	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A9D66_RS04665	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS04685	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS04695	SM00448	cheY-homologous receiver domain
A9D66_RS04695	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS04700	SM00387	Histidine kinase-like ATPases
A9D66_RS04700	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS04755	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS04765	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS04830	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS04845	SM00650	Ribosomal RNA adenine dimethylases
A9D66_RS04910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9D66_RS04910	SM00895	A9D66_RS04910
A9D66_RS04945	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS05020	SM00448	cheY-homologous receiver domain
A9D66_RS05025	SM00387	Histidine kinase-like ATPases
A9D66_RS05025	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS05025	SM00448	cheY-homologous receiver domain
A9D66_RS05030	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS05100	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9D66_RS05100	SM00475	5'-3' exonuclease
A9D66_RS05130	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A9D66_RS05130	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A9D66_RS05240	SM00852	Probable molybdopterin binding domain
A9D66_RS05245	SM00028	Tetratricopeptide repeats
A9D66_RS05250	SM00937	A9D66_RS05250
A9D66_RS05260	SM00028	Tetratricopeptide repeats
A9D66_RS05280	SM01400	A9D66_RS05280
A9D66_RS05330	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A9D66_RS05330	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9D66_RS05335	SM00649	Ribosomal protein L11/L12
A9D66_RS05360	SM00663	RNA polymerase I subunit A N-terminus
A9D66_RS05375	SM00838	Elongation factor G C-terminus
A9D66_RS05375	SM00889	Elongation factor G, domain IV
A9D66_RS05385	SM01403	A9D66_RS05385
A9D66_RS05405	SM01382	A9D66_RS05405
A9D66_RS05405	SM01383	A9D66_RS05405
A9D66_RS05420	SM00322	K homology RNA-binding domain
A9D66_RS05440	SM01374	A9D66_RS05440
A9D66_RS05445	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9D66_RS05505	SM00363	S4 RNA-binding domain
A9D66_RS05505	SM01390	A9D66_RS05505
A9D66_RS05510	SM00662	RNA polymerases D
A9D66_RS05560	SM00838	Elongation factor G C-terminus
A9D66_RS05600	SM00829	Enoylreductase
A9D66_RS05650	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS05660	SM00829	Enoylreductase
A9D66_RS05695	SM00855	Phosphoglycerate mutase family
A9D66_RS05745	SM00014	Acid phosphatase homologues
A9D66_RS05765	SM00091	PAS domain
A9D66_RS05765	SM00387	Histidine kinase-like ATPases
A9D66_RS05765	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS05770	SM00448	cheY-homologous receiver domain
A9D66_RS05770	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS05790	SM01329	A9D66_RS05790
A9D66_RS05905	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS05985	SM00646	A9D66_RS05985
A9D66_RS06085	SM00954	Region found in RelA / SpoT proteins
A9D66_RS06120	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS06120	SM00994	ClpX C4-type zinc finger
A9D66_RS06120	SM01086	C-terminal, D2-small domain, of ClpB protein
A9D66_RS06125	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS06125	SM00464	Found in ATP-dependent protease La (LON)
A9D66_RS06130	SM00411	bacterial (prokaryotic) histone like domain
A9D66_RS06155	SM00257	Lysin motif
A9D66_RS06160	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS06175	SM00479	A9D66_RS06175
A9D66_RS06180	SM00331	Sigma factor PP2C-like phosphatases
A9D66_RS06180	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A9D66_RS06205	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS06210	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS06245	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS06255	SM00493	A9D66_RS06255
A9D66_RS06270	SM00460	Transglutaminase/protease-like homologues
A9D66_RS06280	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS06325	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A9D66_RS06330	SM00822	A9D66_RS06330
A9D66_RS06340	SM00825	Beta-ketoacyl synthase
A9D66_RS06395	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS06450	SM01359	A9D66_RS06450
A9D66_RS06450	SM01360	A9D66_RS06450
A9D66_RS06490	SM00271	DnaJ molecular chaperone homology domain
A9D66_RS06495	SM00448	cheY-homologous receiver domain
A9D66_RS06500	SM00244	prohibitin homologues
A9D66_RS06505	SM00244	prohibitin homologues
A9D66_RS06510	SM01321	A9D66_RS06510
A9D66_RS06515	SM00788	Adenylosuccinate synthetase
A9D66_RS06525	SM00822	A9D66_RS06525
A9D66_RS06540	SM00487	DEAD-like helicases superfamily
A9D66_RS06570	SM00220	Serine/Threonine protein kinases, catalytic domain
A9D66_RS06590	SM00855	Phosphoglycerate mutase family
A9D66_RS06650	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS06655	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9D66_RS06665	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A9D66_RS06670	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A9D66_RS06685	SM00974	A9D66_RS06685
A9D66_RS06705	SM00966	SpoVT / AbrB like domain 
A9D66_RS06725	SM00481	DNA polymerase alpha chain like domain
A9D66_RS06740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9D66_RS06780	SM00091	PAS domain
A9D66_RS06780	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS06795	SM01060	A9D66_RS06795
A9D66_RS06845	SM00448	cheY-homologous receiver domain
A9D66_RS06845	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS06850	SM00387	Histidine kinase-like ATPases
A9D66_RS06850	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS06890	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS06890	SM00448	cheY-homologous receiver domain
A9D66_RS06905	SM00478	endonuclease III
A9D66_RS06930	SM00244	prohibitin homologues
A9D66_RS07015	SM00904	Riboflavin kinase
A9D66_RS07060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9D66_RS07070	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS07080	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS07085	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS07125	SM00387	Histidine kinase-like ATPases
A9D66_RS07125	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS07130	SM00387	Histidine kinase-like ATPases
A9D66_RS07130	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS07130	SM00448	cheY-homologous receiver domain
A9D66_RS07155	SM00387	Histidine kinase-like ATPases
A9D66_RS07155	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS07155	SM00448	cheY-homologous receiver domain
A9D66_RS07165	SM00138	Methyltransferase, chemotaxis proteins 
A9D66_RS07170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS07170	SM00387	Histidine kinase-like ATPases
A9D66_RS07170	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS07170	SM00448	cheY-homologous receiver domain
A9D66_RS07175	SM00091	PAS domain
A9D66_RS07175	SM00387	Histidine kinase-like ATPases
A9D66_RS07175	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS07180	SM00448	cheY-homologous receiver domain
A9D66_RS07190	SM00813	Alpha-L-arabinofuranosidase C-terminus
A9D66_RS07210	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS07210	SM00962	SRP54-type protein, GTPase domain
A9D66_RS07210	SM00963	SRP54-type protein, helical bundle domain
A9D66_RS07275	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A9D66_RS07275	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9D66_RS07315	SM00812	Alpha-L-fucosidase
A9D66_RS07340	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS07390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9D66_RS07395	SM00838	Elongation factor G C-terminus
A9D66_RS07410	SM00358	Double-stranded RNA binding motif
A9D66_RS07410	SM00535	Ribonuclease III family
A9D66_RS07425	SM00448	cheY-homologous receiver domain
A9D66_RS07435	SM01118	A9D66_RS07435
A9D66_RS07470	SM00357	Cold shock protein domain
A9D66_RS07490	SM00487	DEAD-like helicases superfamily
A9D66_RS07490	SM00490	helicase superfamily c-terminal domain
A9D66_RS07520	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS07520	SM00267	diguanylate cyclase
A9D66_RS07540	SM00869	Autotransporter beta-domain
A9D66_RS07545	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A9D66_RS07550	SM00671	Sel1-like repeats.
A9D66_RS07550	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A9D66_RS07750	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS07835	SM00481	DNA polymerase alpha chain like domain
A9D66_RS07875	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9D66_RS07905	SM00267	diguanylate cyclase
A9D66_RS07930	SM00972	Spore Coat Protein U domain
A9D66_RS07945	SM00972	Spore Coat Protein U domain
A9D66_RS07955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9D66_RS07975	SM01172	A9D66_RS07975
A9D66_RS07980	SM00710	Parallel beta-helix repeats
A9D66_RS07980	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
A9D66_RS08005	SM00434	DNA Topoisomerase IV
A9D66_RS08010	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS08015	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS08040	SM01217	A9D66_RS08040
A9D66_RS08045	SM00631	A9D66_RS08045
A9D66_RS08075	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS08100	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS08115	SM00947	Carbonic anhydrase
A9D66_RS08130	SM00357	Cold shock protein domain
A9D66_RS08250	SM00267	diguanylate cyclase
A9D66_RS08260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS08260	SM00267	diguanylate cyclase
A9D66_RS08290	SM00528	Domain in histone-like proteins of HNS family
A9D66_RS08310	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS08335	SM00248	ankyrin repeats
A9D66_RS08380	SM00220	Serine/Threonine protein kinases, catalytic domain
A9D66_RS08385	SM00220	Serine/Threonine protein kinases, catalytic domain
A9D66_RS08390	SM00331	Sigma factor PP2C-like phosphatases
A9D66_RS08390	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A9D66_RS08440	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS08560	SM00271	DnaJ molecular chaperone homology domain
A9D66_RS08605	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS08630	SM00861	Transketolase, pyrimidine binding domain
A9D66_RS08640	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A9D66_RS08660	SM01091	Transporter associated domain
A9D66_RS08690	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS08695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9D66_RS08715	SM00984	UDP binding domain
A9D66_RS08735	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS08755	SM01018	B12 binding domain
A9D66_RS08765	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9D66_RS08810	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS08810	SM00357	Cold shock protein domain
A9D66_RS08810	SM00955	A9D66_RS08810
A9D66_RS08820	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9D66_RS08825	SM00267	diguanylate cyclase
A9D66_RS08830	SM00479	A9D66_RS08830
A9D66_RS08845	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS08880	SM00947	Carbonic anhydrase
A9D66_RS08890	SM00478	endonuclease III
A9D66_RS08890	SM00525	A9D66_RS08890
A9D66_RS08915	SM00450	Rhodanese Homology Domain
A9D66_RS08925	SM00644	A9D66_RS08925
A9D66_RS08945	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS08985	SM00479	A9D66_RS08985
A9D66_RS09015	SM00947	Carbonic anhydrase
A9D66_RS09060	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS09060	SM00448	cheY-homologous receiver domain
A9D66_RS09130	SM00968	SMC proteins Flexible Hinge Domain
A9D66_RS09135	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A9D66_RS09150	SM00292	breast cancer carboxy-terminal domain
A9D66_RS09150	SM00532	Ligase N family
A9D66_RS09175	SM00434	DNA Topoisomerase IV
A9D66_RS09180	SM00564	beta-propeller repeat
A9D66_RS09225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9D66_RS09225	SM00866	A9D66_RS09225
A9D66_RS09250	SM00240	Forkhead associated domain
A9D66_RS09270	SM00830	Chorismate mutase type II
A9D66_RS09315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS09315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS09325	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS09335	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS09335	SM00091	PAS domain
A9D66_RS09335	SM00387	Histidine kinase-like ATPases
A9D66_RS09335	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS09335	SM00448	cheY-homologous receiver domain
A9D66_RS09340	SM00448	cheY-homologous receiver domain
A9D66_RS09350	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS09355	SM00091	PAS domain
A9D66_RS09355	SM00387	Histidine kinase-like ATPases
A9D66_RS09355	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS09355	SM00448	cheY-homologous receiver domain
A9D66_RS09515	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS09525	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS09550	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9D66_RS09550	SM01091	Transporter associated domain
A9D66_RS09585	SM00387	Histidine kinase-like ATPases
A9D66_RS09585	SM00433	TopoisomeraseII
A9D66_RS09610	SM01192	A9D66_RS09610
A9D66_RS09610	SM01193	A9D66_RS09610
A9D66_RS09635	SM00463	Small MutS-related domain
A9D66_RS09655	SM00257	Lysin motif
A9D66_RS09665	SM01103	A9D66_RS09665
A9D66_RS09675	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS09715	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS09730	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9D66_RS09750	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS09750	SM00091	PAS domain
A9D66_RS09750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS09800	SM00670	Large family of predicted nucleotide-binding domains
A9D66_RS09820	SM01130	A9D66_RS09820
A9D66_RS09845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9D66_RS09890	SM00758	A9D66_RS09890
A9D66_RS09930	SM00646	A9D66_RS09930
A9D66_RS10010	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS10010	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS10010	SM00267	diguanylate cyclase
A9D66_RS10025	SM00448	cheY-homologous receiver domain
A9D66_RS10030	SM00387	Histidine kinase-like ATPases
A9D66_RS10040	SM00014	Acid phosphatase homologues
A9D66_RS10140	SM00528	Domain in histone-like proteins of HNS family
A9D66_RS10165	SM00248	ankyrin repeats
A9D66_RS10180	SM00248	ankyrin repeats
A9D66_RS10190	SM00487	DEAD-like helicases superfamily
A9D66_RS10190	SM00490	helicase superfamily c-terminal domain
A9D66_RS10275	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS10305	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS10350	SM00327	von Willebrand factor (vWF) type A domain
A9D66_RS10385	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS10445	SM00912	haemagglutination activity domain
A9D66_RS10475	SM00470	ParB-like nuclease domain
A9D66_RS10535	SM00100	Cyclic nucleotide-monophosphate binding domain
A9D66_RS10535	SM00419	helix_turn_helix, cAMP Regulatory protein
A9D66_RS10610	SM01007	Class II Aldolase and Adducin N-terminal domain
A9D66_RS10655	SM00841	Elongation factor P, C-terminal
A9D66_RS10655	SM01185	A9D66_RS10655
A9D66_RS10660	SM00822	A9D66_RS10660
A9D66_RS10680	SM00899	A9D66_RS10680
A9D66_RS10715	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A9D66_RS10725	SM00851	MGS-like domain
A9D66_RS10725	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A9D66_RS10750	SM00850	LytTr DNA-binding domain
A9D66_RS10755	SM00937	A9D66_RS10755
A9D66_RS10765	SM00448	cheY-homologous receiver domain
A9D66_RS10765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9D66_RS10775	SM00073	Histidine Phosphotransfer domain
A9D66_RS10775	SM00387	Histidine kinase-like ATPases
A9D66_RS10775	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS10775	SM00448	cheY-homologous receiver domain
A9D66_RS10800	SM00966	SpoVT / AbrB like domain 
A9D66_RS10820	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS10820	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS10820	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS10820	SM00091	PAS domain
A9D66_RS10820	SM00267	diguanylate cyclase
A9D66_RS10825	SM00448	cheY-homologous receiver domain
A9D66_RS10835	SM00138	Methyltransferase, chemotaxis proteins 
A9D66_RS10840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10850	SM00260	Two component signalling adaptor domain
A9D66_RS10865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10930	SM01049	A9D66_RS10930
A9D66_RS10940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS10940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS10945	SM00073	Histidine Phosphotransfer domain
A9D66_RS10945	SM00260	Two component signalling adaptor domain
A9D66_RS10945	SM00387	Histidine kinase-like ATPases
A9D66_RS10945	SM01231	A9D66_RS10945
A9D66_RS10950	SM00448	cheY-homologous receiver domain
A9D66_RS10960	SM00260	Two component signalling adaptor domain
A9D66_RS11070	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS11090	SM00073	Histidine Phosphotransfer domain
A9D66_RS11090	SM00260	Two component signalling adaptor domain
A9D66_RS11090	SM00387	Histidine kinase-like ATPases
A9D66_RS11090	SM01231	A9D66_RS11090
A9D66_RS11100	SM00448	cheY-homologous receiver domain
A9D66_RS11115	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11115	SM00962	SRP54-type protein, GTPase domain
A9D66_RS11130	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS11130	SM00267	diguanylate cyclase
A9D66_RS11135	SM00267	diguanylate cyclase
A9D66_RS11145	SM00267	diguanylate cyclase
A9D66_RS11195	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11250	SM00822	A9D66_RS11250
A9D66_RS11275	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11280	SM00448	cheY-homologous receiver domain
A9D66_RS11290	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS11290	SM00448	cheY-homologous receiver domain
A9D66_RS11330	SM00047	Lysozyme subfamily 2
A9D66_RS11380	SM00260	Two component signalling adaptor domain
A9D66_RS11380	SM00448	cheY-homologous receiver domain
A9D66_RS11385	SM00858	A9D66_RS11385
A9D66_RS11400	SM00387	Histidine kinase-like ATPases
A9D66_RS11405	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS11405	SM00267	diguanylate cyclase
A9D66_RS11405	SM00448	cheY-homologous receiver domain
A9D66_RS11410	SM00091	PAS domain
A9D66_RS11410	SM00387	Histidine kinase-like ATPases
A9D66_RS11415	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS11415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS11415	SM00091	PAS domain
A9D66_RS11415	SM00267	diguanylate cyclase
A9D66_RS11425	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS11450	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11450	SM01086	C-terminal, D2-small domain, of ClpB protein
A9D66_RS11455	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS11475	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11475	SM00843	A9D66_RS11475
A9D66_RS11495	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11525	SM00562	A9D66_RS11525
A9D66_RS11535	SM00028	Tetratricopeptide repeats
A9D66_RS11550	SM00564	beta-propeller repeat
A9D66_RS11555	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11560	SM00852	Probable molybdopterin binding domain
A9D66_RS11565	SM00450	Rhodanese Homology Domain
A9D66_RS11615	SM00852	Probable molybdopterin binding domain
A9D66_RS11635	SM00448	cheY-homologous receiver domain
A9D66_RS11680	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS11685	SM00869	Autotransporter beta-domain
A9D66_RS11690	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS11690	SM00448	cheY-homologous receiver domain
A9D66_RS11695	SM00387	Histidine kinase-like ATPases
A9D66_RS11695	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS11720	SM00869	Autotransporter beta-domain
A9D66_RS11740	SM00448	cheY-homologous receiver domain
A9D66_RS11740	SM00850	LytTr DNA-binding domain
A9D66_RS11780	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS11790	SM00923	MbtH-like protein
A9D66_RS11795	SM00824	Thioesterase
A9D66_RS11875	SM01034	Sensors of blue-light using FAD
A9D66_RS11920	SM00363	S4 RNA-binding domain
A9D66_RS11925	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS11930	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS11930	SM00448	cheY-homologous receiver domain
A9D66_RS11935	SM00450	Rhodanese Homology Domain
A9D66_RS11955	SM00984	UDP binding domain
A9D66_RS11970	SM00823	Phosphopantetheine attachment site
A9D66_RS11970	SM00824	Thioesterase
A9D66_RS11985	SM00974	A9D66_RS11985
A9D66_RS12000	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS12060	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9D66_RS12060	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9D66_RS12060	SM00493	A9D66_RS12060
A9D66_RS12155	SM00487	DEAD-like helicases superfamily
A9D66_RS12280	SM00953	A9D66_RS12280
A9D66_RS12365	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS12400	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9D66_RS12400	SM00465	GIY-YIG type nucleases (URI domain)
A9D66_RS12410	SM00226	Low molecular weight phosphatase family
A9D66_RS12425	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS12440	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS12450	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS12505	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS12950	SM00448	cheY-homologous receiver domain
A9D66_RS12955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS12955	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS12955	SM00091	PAS domain
A9D66_RS12955	SM00387	Histidine kinase-like ATPases
A9D66_RS12955	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS12955	SM00448	cheY-homologous receiver domain
A9D66_RS12960	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS12960	SM00732	Likely ribonuclease with RNase H fold.
A9D66_RS13030	SM00479	A9D66_RS13030
A9D66_RS13040	SM00529	Helix-turn-helix diphteria tox regulatory element
A9D66_RS13085	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS13090	SM00387	Histidine kinase-like ATPases
A9D66_RS13095	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS13095	SM00448	cheY-homologous receiver domain
A9D66_RS13100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS13140	SM00857	Resolvase, N terminal domain
A9D66_RS13225	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9D66_RS13225	SM01240	A9D66_RS13225
A9D66_RS13250	SM00822	A9D66_RS13250
A9D66_RS13260	SM00028	Tetratricopeptide repeats
A9D66_RS13270	SM00411	bacterial (prokaryotic) histone like domain
A9D66_RS13275	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS13355	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS13380	SM00363	S4 RNA-binding domain
A9D66_RS13405	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS13445	SM00028	Tetratricopeptide repeats
A9D66_RS13455	SM00357	Cold shock protein domain
A9D66_RS13460	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS13465	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS13495	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A9D66_RS13510	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A9D66_RS13525	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9D66_RS13565	SM00840	A9D66_RS13565
A9D66_RS13585	SM01234	A9D66_RS13585
A9D66_RS13630	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS13655	SM00656	A9D66_RS13655
A9D66_RS13695	SM00841	Elongation factor P, C-terminal
A9D66_RS13695	SM01185	A9D66_RS13695
A9D66_RS13705	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS13705	SM00267	diguanylate cyclase
A9D66_RS13705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS13745	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS13750	SM00487	DEAD-like helicases superfamily
A9D66_RS13750	SM00490	helicase superfamily c-terminal domain
A9D66_RS13775	SM00357	Cold shock protein domain
A9D66_RS13780	SM01322	A9D66_RS13780
A9D66_RS13790	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS13790	SM00267	diguanylate cyclase
A9D66_RS13805	SM00822	A9D66_RS13805
A9D66_RS13830	SM00853	MutL C terminal dimerisation domain
A9D66_RS13830	SM01340	A9D66_RS13830
A9D66_RS13835	SM00646	A9D66_RS13835
A9D66_RS13880	SM00474	3'-5' exonuclease
A9D66_RS13895	SM00528	Domain in histone-like proteins of HNS family
A9D66_RS13905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS13905	SM00267	diguanylate cyclase
A9D66_RS13910	SM00260	Two component signalling adaptor domain
A9D66_RS13915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS13915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS13925	SM00487	DEAD-like helicases superfamily
A9D66_RS13925	SM00490	helicase superfamily c-terminal domain
A9D66_RS13990	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS14015	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9D66_RS14015	SM01091	Transporter associated domain
A9D66_RS14075	SM01230	A9D66_RS14075
A9D66_RS14085	SM01230	A9D66_RS14085
A9D66_RS14095	SM00267	diguanylate cyclase
A9D66_RS14095	SM00448	cheY-homologous receiver domain
A9D66_RS14155	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS14155	SM00091	PAS domain
A9D66_RS14155	SM00387	Histidine kinase-like ATPases
A9D66_RS14155	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS14155	SM00448	cheY-homologous receiver domain
A9D66_RS14155	SM01079	A9D66_RS14155
A9D66_RS14160	SM00448	cheY-homologous receiver domain
A9D66_RS14160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9D66_RS14195	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS14245	SM01323	A9D66_RS14245
A9D66_RS14260	SM00344	helix_turn_helix ASNC type
A9D66_RS14335	SM00387	Histidine kinase-like ATPases
A9D66_RS14420	SM00944	Pro-kumamolisin, activation domain
A9D66_RS14475	SM01130	A9D66_RS14475
A9D66_RS14500	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS14505	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS14505	SM00962	SRP54-type protein, GTPase domain
A9D66_RS14505	SM00963	SRP54-type protein, helical bundle domain
A9D66_RS14515	SM00478	endonuclease III
A9D66_RS14525	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS14525	SM00091	PAS domain
A9D66_RS14525	SM00387	Histidine kinase-like ATPases
A9D66_RS14525	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS14525	SM00448	cheY-homologous receiver domain
A9D66_RS14540	SM00465	GIY-YIG type nucleases (URI domain)
A9D66_RS14575	SM00507	HNH nucleases
A9D66_RS14580	SM00861	Transketolase, pyrimidine binding domain
A9D66_RS14605	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS14690	SM00422	helix_turn_helix, mercury resistance
A9D66_RS14695	SM00411	bacterial (prokaryotic) histone like domain
A9D66_RS14700	SM00873	B3/4 domain
A9D66_RS14700	SM00874	tRNA synthetase B5 domain
A9D66_RS14700	SM00896	Ferredoxin-fold anticodon binding domain
A9D66_RS14725	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9D66_RS14730	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS14735	SM00642	Alpha-amylase domain
A9D66_RS14765	SM00642	Alpha-amylase domain
A9D66_RS14770	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS14850	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS14880	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS14940	SM00487	DEAD-like helicases superfamily
A9D66_RS14940	SM00490	helicase superfamily c-terminal domain
A9D66_RS15025	SM01001	AIR carboxylase
A9D66_RS15045	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS15045	SM00322	K homology RNA-binding domain
A9D66_RS15050	SM01387	A9D66_RS15050
A9D66_RS15070	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS15070	SM00322	K homology RNA-binding domain
A9D66_RS15120	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A9D66_RS15125	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A9D66_RS15170	SM00822	A9D66_RS15170
A9D66_RS15185	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS15185	SM00267	diguanylate cyclase
A9D66_RS15185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS15255	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9D66_RS15285	SM00257	Lysin motif
A9D66_RS15325	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS15330	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS15335	SM00966	SpoVT / AbrB like domain 
A9D66_RS15460	SM01160	A9D66_RS15460
A9D66_RS15515	SM00098	Alkaline phosphatase homologues
A9D66_RS15525	SM00977	TilS substrate C-terminal domain
A9D66_RS15540	SM01351	A9D66_RS15540
A9D66_RS15575	SM00316	Ribosomal protein S1-like RNA-binding domain
A9D66_RS15715	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS15750	SM00448	cheY-homologous receiver domain
A9D66_RS15750	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS15755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS15755	SM00387	Histidine kinase-like ATPases
A9D66_RS15755	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS15795	SM00363	S4 RNA-binding domain
A9D66_RS15800	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS15800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS15800	SM00091	PAS domain
A9D66_RS15800	SM00267	diguanylate cyclase
A9D66_RS15805	SM00487	DEAD-like helicases superfamily
A9D66_RS15805	SM00490	helicase superfamily c-terminal domain
A9D66_RS15850	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS15850	SM00478	endonuclease III
A9D66_RS15850	SM01009	AlkA N-terminal domain
A9D66_RS15870	SM00829	Enoylreductase
A9D66_RS15945	SM01126	A9D66_RS15945
A9D66_RS15995	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS16075	SM00645	Papain family cysteine protease
A9D66_RS16080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS16080	SM00387	Histidine kinase-like ATPases
A9D66_RS16080	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS16085	SM00448	cheY-homologous receiver domain
A9D66_RS16085	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS16100	SM00487	DEAD-like helicases superfamily
A9D66_RS16100	SM00490	helicase superfamily c-terminal domain
A9D66_RS16100	SM00982	A9D66_RS16100
A9D66_RS16100	SM01058	CarD-like/TRCF domain
A9D66_RS16110	SM00073	Histidine Phosphotransfer domain
A9D66_RS16110	SM00260	Two component signalling adaptor domain
A9D66_RS16110	SM00387	Histidine kinase-like ATPases
A9D66_RS16110	SM01231	A9D66_RS16110
A9D66_RS16115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS16115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS16120	SM00260	Two component signalling adaptor domain
A9D66_RS16125	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS16125	SM00448	cheY-homologous receiver domain
A9D66_RS16130	SM00138	Methyltransferase, chemotaxis proteins 
A9D66_RS16135	SM00448	cheY-homologous receiver domain
A9D66_RS16140	SM00155	Phospholipase D. Active site motifs.
A9D66_RS16155	SM00855	Phosphoglycerate mutase family
A9D66_RS16215	SM00248	ankyrin repeats
A9D66_RS16250	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A9D66_RS16255	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A9D66_RS16265	SM00829	Enoylreductase
A9D66_RS16270	SM00267	diguanylate cyclase
A9D66_RS16340	SM00732	Likely ribonuclease with RNase H fold.
A9D66_RS16375	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS16390	SM00411	bacterial (prokaryotic) histone like domain
A9D66_RS16420	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
A9D66_RS16435	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS16465	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A9D66_RS16470	SM00671	Sel1-like repeats.
A9D66_RS16500	SM00054	EF-hand, calcium binding motif
A9D66_RS16590	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9D66_RS16610	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS16660	SM00924	MgtE intracellular N domain
A9D66_RS16700	SM00656	A9D66_RS16700
A9D66_RS16720	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS16760	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS16770	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A9D66_RS16810	SM00422	helix_turn_helix, mercury resistance
A9D66_RS16890	SM00387	Histidine kinase-like ATPases
A9D66_RS16890	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS16890	SM00448	cheY-homologous receiver domain
A9D66_RS16895	SM00387	Histidine kinase-like ATPases
A9D66_RS16895	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS16895	SM00448	cheY-homologous receiver domain
A9D66_RS16900	SM00448	cheY-homologous receiver domain
A9D66_RS16910	SM00387	Histidine kinase-like ATPases
A9D66_RS16910	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS16910	SM00448	cheY-homologous receiver domain
A9D66_RS16915	SM00867	YceI-like domain 
A9D66_RS16925	SM00867	YceI-like domain 
A9D66_RS16985	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9D66_RS17115	SM00812	Alpha-L-fucosidase
A9D66_RS17120	SM00636	A9D66_RS17120
A9D66_RS17135	SM00758	A9D66_RS17135
A9D66_RS17135	SM01217	A9D66_RS17135
A9D66_RS17165	SM01149	A9D66_RS17165
A9D66_RS17205	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A9D66_RS17240	SM00260	Two component signalling adaptor domain
A9D66_RS17250	SM00073	Histidine Phosphotransfer domain
A9D66_RS17250	SM00260	Two component signalling adaptor domain
A9D66_RS17250	SM00387	Histidine kinase-like ATPases
A9D66_RS17250	SM00448	cheY-homologous receiver domain
A9D66_RS17250	SM01231	A9D66_RS17250
A9D66_RS17255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS17260	SM00260	Two component signalling adaptor domain
A9D66_RS17265	SM00448	cheY-homologous receiver domain
A9D66_RS17270	SM00448	cheY-homologous receiver domain
A9D66_RS17295	SM00491	A9D66_RS17295
A9D66_RS17325	SM00954	Region found in RelA / SpoT proteins
A9D66_RS17380	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS17380	SM00487	DEAD-like helicases superfamily
A9D66_RS17380	SM00490	helicase superfamily c-terminal domain
A9D66_RS17380	SM00847	Helicase associated domain (HA2)  Add an annotation
A9D66_RS17395	SM00341	Helicase and RNase D C-terminal
A9D66_RS17395	SM00487	DEAD-like helicases superfamily
A9D66_RS17395	SM00490	helicase superfamily c-terminal domain
A9D66_RS17395	SM00956	A9D66_RS17395
A9D66_RS17405	SM00448	cheY-homologous receiver domain
A9D66_RS17430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS17430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS17445	SM00448	cheY-homologous receiver domain
A9D66_RS17450	SM00091	PAS domain
A9D66_RS17450	SM00911	HWE histidine kinase
A9D66_RS17545	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS17775	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS17790	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9D66_RS17850	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS17925	SM01126	A9D66_RS17925
A9D66_RS17945	SM00834	Putative regulatory protein
A9D66_RS17995	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS18090	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS18090	SM00871	Bacterial transcription activator, effector binding domain
A9D66_RS18100	SM00855	Phosphoglycerate mutase family
A9D66_RS18155	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS18155	SM01086	C-terminal, D2-small domain, of ClpB protein
A9D66_RS18160	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS18170	SM00062	Bacterial periplasmic substrate-binding proteins
A9D66_RS18245	SM00564	beta-propeller repeat
A9D66_RS18255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS18300	SM00881	CoA binding domain
A9D66_RS18310	SM00387	Histidine kinase-like ATPases
A9D66_RS18310	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS18315	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS18315	SM00448	cheY-homologous receiver domain
A9D66_RS18375	SM00387	Histidine kinase-like ATPases
A9D66_RS18375	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS18380	SM00448	cheY-homologous receiver domain
A9D66_RS18380	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS18395	SM00642	Alpha-amylase domain
A9D66_RS18405	SM00528	Domain in histone-like proteins of HNS family
A9D66_RS18415	SM00318	Staphylococcal nuclease homologues
A9D66_RS18510	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS18575	SM00869	Autotransporter beta-domain
A9D66_RS18630	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS18665	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS18665	SM00448	cheY-homologous receiver domain
A9D66_RS18670	SM00387	Histidine kinase-like ATPases
A9D66_RS18670	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS18670	SM00448	cheY-homologous receiver domain
A9D66_RS18675	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS18690	SM00060	Fibronectin type 3 domain
A9D66_RS18720	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9D66_RS18785	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS18785	SM00387	Histidine kinase-like ATPases
A9D66_RS18820	SM00506	Appr-1"-p processing enzyme
A9D66_RS18875	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9D66_RS18900	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS18915	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS18975	SM00861	Transketolase, pyrimidine binding domain
A9D66_RS18995	SM00028	Tetratricopeptide repeats
A9D66_RS18995	SM00327	von Willebrand factor (vWF) type A domain
A9D66_RS19000	SM00327	von Willebrand factor (vWF) type A domain
A9D66_RS19020	SM00965	Secretin and TonB N terminus short domain
A9D66_RS19070	SM00487	DEAD-like helicases superfamily
A9D66_RS19070	SM00490	helicase superfamily c-terminal domain
A9D66_RS19080	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9D66_RS19080	SM00954	Region found in RelA / SpoT proteins
A9D66_RS19085	SM01409	A9D66_RS19085
A9D66_RS19090	SM00072	Guanylate kinase homologues.
A9D66_RS19115	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS19140	SM01011	Aminopeptidase P, N-terminal domain
A9D66_RS19215	SM00028	Tetratricopeptide repeats
A9D66_RS19215	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS19215	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS19300	SM00464	Found in ATP-dependent protease La (LON)
A9D66_RS19350	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS19375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS19405	SM00917	LeuA allosteric (dimerisation) domain
A9D66_RS19410	SM01329	A9D66_RS19410
A9D66_RS19430	SM00267	diguanylate cyclase
A9D66_RS19485	SM00919	Malic enzyme, NAD binding domain
A9D66_RS19485	SM01274	A9D66_RS19485
A9D66_RS19500	SM00387	Histidine kinase-like ATPases
A9D66_RS19500	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS19500	SM00448	cheY-homologous receiver domain
A9D66_RS19540	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS19540	SM00448	cheY-homologous receiver domain
A9D66_RS19555	SM00387	Histidine kinase-like ATPases
A9D66_RS19555	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS19560	SM00448	cheY-homologous receiver domain
A9D66_RS19560	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS19580	SM00822	A9D66_RS19580
A9D66_RS19585	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS19600	SM00642	Alpha-amylase domain
A9D66_RS19610	SM01154	A9D66_RS19610
A9D66_RS19655	SM00450	Rhodanese Homology Domain
A9D66_RS19735	SM00028	Tetratricopeptide repeats
A9D66_RS19820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9D66_RS19820	SM00866	A9D66_RS19820
A9D66_RS19880	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS19910	SM01211	A9D66_RS19910
A9D66_RS20015	SM00528	Domain in histone-like proteins of HNS family
A9D66_RS20030	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20055	SM00882	Coenzyme A transferase
A9D66_RS20060	SM00882	Coenzyme A transferase
A9D66_RS20075	SM00984	UDP binding domain
A9D66_RS20100	SM00893	Electron transfer flavoprotein domain
A9D66_RS20105	SM00893	Electron transfer flavoprotein domain
A9D66_RS20160	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20185	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9D66_RS20225	SM00487	DEAD-like helicases superfamily
A9D66_RS20225	SM00490	helicase superfamily c-terminal domain
A9D66_RS20260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS20295	SM00825	Beta-ketoacyl synthase
A9D66_RS20370	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20390	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20390	SM00448	cheY-homologous receiver domain
A9D66_RS20395	SM00387	Histidine kinase-like ATPases
A9D66_RS20410	SM00830	Chorismate mutase type II
A9D66_RS20420	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20490	SM00986	Uracil DNA glycosylase superfamily
A9D66_RS20490	SM00987	UreE urease accessory protein, C-terminal domain 
A9D66_RS20525	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20525	SM00930	A9D66_RS20525
A9D66_RS20545	SM00387	Histidine kinase-like ATPases
A9D66_RS20545	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS20545	SM00448	cheY-homologous receiver domain
A9D66_RS20595	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS20595	SM00091	PAS domain
A9D66_RS20595	SM00387	Histidine kinase-like ATPases
A9D66_RS20595	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS20595	SM00448	cheY-homologous receiver domain
A9D66_RS20615	SM01005	Alanine racemase, C-terminal domain
A9D66_RS20625	SM00344	helix_turn_helix ASNC type
A9D66_RS20680	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20695	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
A9D66_RS20700	SM00986	Uracil DNA glycosylase superfamily
A9D66_RS20700	SM00987	UreE urease accessory protein, C-terminal domain 
A9D66_RS20705	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9D66_RS20775	SM00448	cheY-homologous receiver domain
A9D66_RS20775	SM00850	LytTr DNA-binding domain
A9D66_RS20780	SM00387	Histidine kinase-like ATPases
A9D66_RS20830	SM00091	PAS domain
A9D66_RS20830	SM00138	Methyltransferase, chemotaxis proteins 
A9D66_RS20830	SM00911	HWE histidine kinase
A9D66_RS20835	SM00448	cheY-homologous receiver domain
A9D66_RS20845	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20845	SM00448	cheY-homologous receiver domain
A9D66_RS20905	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20980	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS20985	SM00631	A9D66_RS20985
A9D66_RS21010	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9D66_RS21010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS21015	SM00477	DNA/RNA non-specific endonuclease
A9D66_RS21015	SM00892	DNA/RNA non-specific endonuclease
A9D66_RS21135	SM00493	A9D66_RS21135
A9D66_RS21355	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS21530	SM00257	Lysin motif
A9D66_RS21555	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9D66_RS21555	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9D66_RS21555	SM00493	A9D66_RS21555
A9D66_RS21610	SM00487	DEAD-like helicases superfamily
A9D66_RS21610	SM00490	helicase superfamily c-terminal domain
A9D66_RS21645	SM00986	Uracil DNA glycosylase superfamily
A9D66_RS21645	SM00987	UreE urease accessory protein, C-terminal domain 
A9D66_RS21650	SM00448	cheY-homologous receiver domain
A9D66_RS21660	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS21665	SM00487	DEAD-like helicases superfamily
A9D66_RS21665	SM00490	helicase superfamily c-terminal domain
A9D66_RS21675	SM00357	Cold shock protein domain
A9D66_RS21675	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS21675	SM00959	Rho termination factor, N-terminal domain
A9D66_RS21705	SM00257	Lysin motif
A9D66_RS21735	SM01150	A9D66_RS21735
A9D66_RS21790	SM00644	A9D66_RS21790
A9D66_RS21800	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9D66_RS21835	SM01217	A9D66_RS21835
A9D66_RS21840	SM00905	Dihydroneopterin aldolase
A9D66_RS21870	SM00400	zinc finger
A9D66_RS21870	SM00493	A9D66_RS21870
A9D66_RS21870	SM00766	DNA primase DnaG DnaB-binding
A9D66_RS21975	SM00363	S4 RNA-binding domain
A9D66_RS22020	SM00470	ParB-like nuclease domain
A9D66_RS22045	SM01259	A9D66_RS22045
A9D66_RS22075	SM00836	DALR anticodon binding domain
A9D66_RS22075	SM01016	Arginyl tRNA synthetase N terminal dom
A9D66_RS22105	SM00823	Phosphopantetheine attachment site
A9D66_RS22105	SM00824	Thioesterase
A9D66_RS22145	SM00938	Nitrogen regulatory protein P-II
A9D66_RS22155	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS22170	SM00052	Putative diguanylate phosphodiesterase
A9D66_RS22205	SM00244	prohibitin homologues
A9D66_RS22250	SM00448	cheY-homologous receiver domain
A9D66_RS22250	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS22255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9D66_RS22255	SM00387	Histidine kinase-like ATPases
A9D66_RS22255	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS22285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9D66_RS22330	SM01060	A9D66_RS22330
A9D66_RS22345	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS22345	SM00448	cheY-homologous receiver domain
A9D66_RS22360	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS22405	SM00849	Metallo-beta-lactamase superfamily
A9D66_RS22435	SM00960	Roadblock/LC7 domain
A9D66_RS22530	SM00387	Histidine kinase-like ATPases
A9D66_RS22530	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS22535	SM00448	cheY-homologous receiver domain
A9D66_RS22535	SM00862	Transcriptional regulatory protein, C terminal
A9D66_RS22560	SM00248	ankyrin repeats
A9D66_RS22565	SM01060	A9D66_RS22565
A9D66_RS22575	SM00491	A9D66_RS22575
A9D66_RS22605	SM00477	DNA/RNA non-specific endonuclease
A9D66_RS22605	SM00892	DNA/RNA non-specific endonuclease
A9D66_RS22625	SM01004	Delta-aminolevulinic acid dehydratase
A9D66_RS22675	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A9D66_RS22700	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS22710	SM00530	Helix-turn-helix XRE-family like proteins 
A9D66_RS22750	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS22760	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS22840	SM00881	CoA binding domain
A9D66_RS22845	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9D66_RS22845	SM00924	MgtE intracellular N domain
A9D66_RS22880	SM00248	ankyrin repeats
A9D66_RS22890	SM00825	Beta-ketoacyl synthase
A9D66_RS22915	SM00822	A9D66_RS22915
A9D66_RS22955	SM00563	Phosphate acyltransferases
A9D66_RS23025	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9D66_RS23025	SM00474	3'-5' exonuclease
A9D66_RS23025	SM00475	5'-3' exonuclease
A9D66_RS23025	SM00482	DNA polymerase A domain
A9D66_RS23040	SM00912	haemagglutination activity domain
A9D66_RS23060	SM00331	Sigma factor PP2C-like phosphatases
A9D66_RS23060	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A9D66_RS23085	SM00240	Forkhead associated domain
A9D66_RS23100	SM00028	Tetratricopeptide repeats
A9D66_RS23110	SM00220	Serine/Threonine protein kinases, catalytic domain
A9D66_RS23135	SM00965	Secretin and TonB N terminus short domain
A9D66_RS23180	SM00915	Jacalin-like lectin domain
A9D66_RS23210	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS23210	SM01086	C-terminal, D2-small domain, of ClpB protein
A9D66_RS23250	SM00342	helix_turn_helix, arabinose operon control protein
A9D66_RS23260	SM01266	A9D66_RS23260
A9D66_RS23280	SM00155	Phospholipase D. Active site motifs.
A9D66_RS23425	SM00421	helix_turn_helix, Lux Regulon
A9D66_RS23425	SM00448	cheY-homologous receiver domain
A9D66_RS23485	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9D66_RS23500	SM00346	helix_turn_helix isocitrate lyase regulation
A9D66_RS23510	SM00091	PAS domain
A9D66_RS23510	SM00387	Histidine kinase-like ATPases
A9D66_RS23510	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS23510	SM00448	cheY-homologous receiver domain
A9D66_RS23545	SM00564	beta-propeller repeat
A9D66_RS23590	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS23595	SM00836	DALR anticodon binding domain
A9D66_RS23605	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS23695	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS23710	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9D66_RS23720	SM00758	A9D66_RS23720
A9D66_RS23720	SM01217	A9D66_RS23720
A9D66_RS23750	SM00612	A9D66_RS23750
A9D66_RS23780	SM01007	Class II Aldolase and Adducin N-terminal domain
A9D66_RS23810	SM00633	Glycosyl hydrolase family 10
A9D66_RS23825	SM00633	Glycosyl hydrolase family 10
A9D66_RS23835	SM00633	Glycosyl hydrolase family 10
A9D66_RS23885	SM00829	Enoylreductase
A9D66_RS23890	SM00563	Phosphate acyltransferases
A9D66_RS23905	SM00354	helix_turn _helix lactose operon repressor
A9D66_RS23925	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9D66_RS23965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS23965	SM00388	His Kinase A (phosphoacceptor) domain
A9D66_RS23980	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9D66_RS23980	SM01232	A9D66_RS23980
A9D66_RS24015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS24015	SM00091	PAS domain
A9D66_RS24070	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9D66_RS24105	SM00155	Phospholipase D. Active site motifs.
A9D66_RS24170	SM00796	Allophanate hydrolase subunit 1
A9D66_RS24170	SM00797	Allophanate hydrolase subunit 2
A9D66_RS24170	SM00878	Biotin carboxylase C-terminal domain
A9D66_RS24230	SM00382	ATPases associated with a variety of cellular activities
A9D66_RS24280	SM00829	Enoylreductase
A9D66_RS24330	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9D66_RS24330	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9D66_RS24330	SM00091	PAS domain
A9D66_RS24330	SM00267	diguanylate cyclase
A9D66_RS24360	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A9D66_RS24390	SM00014	Acid phosphatase homologues
A9D66_RS24400	SM00028	Tetratricopeptide repeats
A9D66_RS24435	SM00670	Large family of predicted nucleotide-binding domains
A9D66_RS24445	SM00857	Resolvase, N terminal domain
A9D66_RS24470	SM00857	Resolvase, N terminal domain
A9D66_RS24480	SM00966	SpoVT / AbrB like domain 
