CLM98_RS00015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS00015 SM00091 PAS domain CLM98_RS00075 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS00110 SM00155 Phospholipase D. Active site motifs. CLM98_RS00195 SM00796 Allophanate hydrolase subunit 1 CLM98_RS00195 SM00797 Allophanate hydrolase subunit 2 CLM98_RS00195 SM00878 Biotin carboxylase C-terminal domain CLM98_RS00255 SM00382 ATPases associated with a variety of cellular activities CLM98_RS00305 SM00829 Enoylreductase CLM98_RS00355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS00355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS00355 SM00091 PAS domain CLM98_RS00355 SM00267 diguanylate cyclase CLM98_RS00385 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CLM98_RS00420 SM00014 Acid phosphatase homologues CLM98_RS00430 SM00028 Tetratricopeptide repeats CLM98_RS00455 SM00382 ATPases associated with a variety of cellular activities CLM98_RS00455 SM00760 Bacterial dnaA protein helix-turn-helix domain CLM98_RS00460 SM00480 DNA polymerase III beta subunit CLM98_RS00470 SM00387 Histidine kinase-like ATPases CLM98_RS00470 SM00433 TopoisomeraseII CLM98_RS00485 SM00028 Tetratricopeptide repeats CLM98_RS00520 SM00155 Phospholipase D. Active site motifs. CLM98_RS00535 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS00565 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_RS00565 SM00245 tail specific protease CLM98_RS00620 SM00829 Enoylreductase CLM98_RS00750 SM00382 ATPases associated with a variety of cellular activities CLM98_RS00875 SM00487 DEAD-like helicases superfamily CLM98_RS00875 SM00490 helicase superfamily c-terminal domain CLM98_RS00900 SM00822 CLM98_RS00900 CLM98_RS00905 SM00822 CLM98_RS00905 CLM98_RS01190 SM00421 helix_turn_helix, Lux Regulon CLM98_RS01190 SM00448 cheY-homologous receiver domain CLM98_RS01210 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS01290 SM00642 Alpha-amylase domain CLM98_RS01295 SM00642 Alpha-amylase domain CLM98_RS01300 SM00642 Alpha-amylase domain CLM98_RS01350 SM00354 helix_turn _helix lactose operon repressor CLM98_RS01395 SM00344 helix_turn_helix ASNC type CLM98_RS01415 SM00382 ATPases associated with a variety of cellular activities CLM98_RS01430 SM00382 ATPases associated with a variety of cellular activities CLM98_RS01465 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS01495 SM00855 Phosphoglycerate mutase family CLM98_RS01500 SM00867 YceI-like domain CLM98_RS01505 SM00155 Phospholipase D. Active site motifs. CLM98_RS01520 SM00563 Phosphate acyltransferases CLM98_RS01535 SM00028 Tetratricopeptide repeats CLM98_RS01545 SM00829 Enoylreductase CLM98_RS01565 SM01230 CLM98_RS01565 CLM98_RS01570 SM00938 Nitrogen regulatory protein P-II CLM98_RS01580 SM00387 Histidine kinase-like ATPases CLM98_RS01580 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS01585 SM00382 ATPases associated with a variety of cellular activities CLM98_RS01585 SM00448 cheY-homologous receiver domain CLM98_RS01650 SM00450 Rhodanese Homology Domain CLM98_RS01680 SM00387 Histidine kinase-like ATPases CLM98_RS01680 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS01685 SM00382 ATPases associated with a variety of cellular activities CLM98_RS01685 SM00448 cheY-homologous receiver domain CLM98_RS01800 SM00563 Phosphate acyltransferases CLM98_RS01835 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS01860 SM00100 Cyclic nucleotide-monophosphate binding domain CLM98_RS01860 SM00267 diguanylate cyclase CLM98_RS01885 SM00878 Biotin carboxylase C-terminal domain CLM98_RS01910 SM00953 CLM98_RS01910 CLM98_RS01955 SM00833 Cobalamin synthesis protein cobW C-terminal domain CLM98_RS01980 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS02015 SM00829 Enoylreductase CLM98_RS02045 SM00487 DEAD-like helicases superfamily CLM98_RS02045 SM00490 helicase superfamily c-terminal domain CLM98_RS02045 SM00847 Helicase associated domain (HA2) Add an annotation CLM98_RS02180 SM00422 helix_turn_helix, mercury resistance CLM98_RS02215 SM00448 cheY-homologous receiver domain CLM98_RS02215 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS02220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS02220 SM00387 Histidine kinase-like ATPases CLM98_RS02220 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS02365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS02375 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS02395 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS02425 SM00420 helix_turn_helix, Deoxyribose operon repressor CLM98_RS02425 SM01134 CLM98_RS02425 CLM98_RS02440 SM00882 Coenzyme A transferase CLM98_RS02445 SM00882 Coenzyme A transferase CLM98_RS02465 SM00998 Adenylosuccinate lyase C-terminus CLM98_RS02490 SM00346 helix_turn_helix isocitrate lyase regulation CLM98_RS02495 SM00090 RIO-like kinase CLM98_RS02510 SM01228 CLM98_RS02510 CLM98_RS02565 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS02565 SM00876 Biotin and Thiamin Synthesis associated domain CLM98_RS02590 SM00369 Leucine-rich repeats, typical (most populated) subfamily CLM98_RS02695 SM00382 ATPases associated with a variety of cellular activities CLM98_RS02760 SM00267 diguanylate cyclase CLM98_RS02770 SM00642 Alpha-amylase domain CLM98_RS02775 SM00642 Alpha-amylase domain CLM98_RS02785 SM00642 Alpha-amylase domain CLM98_RS02795 SM00642 Alpha-amylase domain CLM98_RS02850 SM00822 CLM98_RS02850 CLM98_RS02865 SM00487 DEAD-like helicases superfamily CLM98_RS02865 SM00490 helicase superfamily c-terminal domain CLM98_RS02875 SM00326 Src homology 3 domains CLM98_RS02880 SM00861 Transketolase, pyrimidine binding domain CLM98_RS02890 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CLM98_RS02910 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS03025 SM00271 DnaJ molecular chaperone homology domain CLM98_RS03045 SM00046 Diacylglycerol kinase catalytic domain (presumed) CLM98_RS03075 SM00903 Flavin reductase like domain CLM98_RS03095 SM00100 Cyclic nucleotide-monophosphate binding domain CLM98_RS03095 SM00419 helix_turn_helix, cAMP Regulatory protein CLM98_RS03150 SM00387 Histidine kinase-like ATPases CLM98_RS03150 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS03150 SM00448 cheY-homologous receiver domain CLM98_RS03155 SM00052 Putative diguanylate phosphodiesterase CLM98_RS03155 SM00267 diguanylate cyclase CLM98_RS03155 SM00448 cheY-homologous receiver domain CLM98_RS03225 SM00563 Phosphate acyltransferases CLM98_RS03250 SM01209 CLM98_RS03250 CLM98_RS03250 SM01210 CLM98_RS03250 CLM98_RS03260 SM00798 AICARFT/IMPCHase bienzyme CLM98_RS03260 SM00851 MGS-like domain CLM98_RS03275 SM00195 Dual specificity phosphatase, catalytic domain CLM98_RS03295 SM00563 Phosphate acyltransferases CLM98_RS03315 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS03350 SM00878 Biotin carboxylase C-terminal domain CLM98_RS03380 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS03390 SM00234 in StAR and phosphatidylcholine transfer protein CLM98_RS03420 SM00883 Chaperonin 10 Kd subunit CLM98_RS03480 SM00944 Pro-kumamolisin, activation domain CLM98_RS03495 SM00867 YceI-like domain CLM98_RS03550 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLM98_RS03560 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_RS03560 SM00895 CLM98_RS03560 CLM98_RS03580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS03580 SM00331 Sigma factor PP2C-like phosphatases CLM98_RS03625 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS03695 SM00267 diguanylate cyclase CLM98_RS03725 SM00062 Bacterial periplasmic substrate-binding proteins CLM98_RS03770 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CLM98_RS03770 SM01232 CLM98_RS03770 CLM98_RS03795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS03805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS03805 SM00091 PAS domain CLM98_RS03805 SM00267 diguanylate cyclase CLM98_RS03810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS03810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS03810 SM01049 CLM98_RS03810 CLM98_RS03815 SM00637 CLM98_RS03815 CLM98_RS03825 SM00267 diguanylate cyclase CLM98_RS03855 SM00448 cheY-homologous receiver domain CLM98_RS03855 SM00850 LytTr DNA-binding domain CLM98_RS03940 SM00382 ATPases associated with a variety of cellular activities CLM98_RS03940 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_RS03970 SM00267 diguanylate cyclase CLM98_RS03975 SM01263 CLM98_RS03975 CLM98_RS03995 SM00564 beta-propeller repeat CLM98_RS04000 SM00062 Bacterial periplasmic substrate-binding proteins CLM98_RS04000 SM00248 ankyrin repeats CLM98_RS04015 SM00829 Enoylreductase CLM98_RS04025 SM00382 ATPases associated with a variety of cellular activities CLM98_RS04035 SM00268 Actin CLM98_RS04060 SM00710 Parallel beta-helix repeats CLM98_RS04080 SM00936 Penicillin-binding protein 5, C-terminal domain CLM98_RS04100 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS04105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_RS04105 SM00245 tail specific protease CLM98_RS04160 SM01350 CLM98_RS04160 CLM98_RS04170 SM00749 bacterial OsmY and nodulation domain CLM98_RS04175 SM00387 Histidine kinase-like ATPases CLM98_RS04175 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS04180 SM00448 cheY-homologous receiver domain CLM98_RS04185 SM00387 Histidine kinase-like ATPases CLM98_RS04185 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS04185 SM00448 cheY-homologous receiver domain CLM98_RS04220 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CLM98_RS04245 SM00382 ATPases associated with a variety of cellular activities CLM98_RS04315 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_RS04315 SM00866 CLM98_RS04315 CLM98_RS04325 SM00354 helix_turn _helix lactose operon repressor CLM98_RS04395 SM00849 Metallo-beta-lactamase superfamily CLM98_RS04400 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS04415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS04415 SM00387 Histidine kinase-like ATPases CLM98_RS04415 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS04420 SM00448 cheY-homologous receiver domain CLM98_RS04420 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS04440 SM00829 Enoylreductase CLM98_RS04460 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_RS04480 SM00382 ATPases associated with a variety of cellular activities CLM98_RS04545 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CLM98_RS04575 SM00387 Histidine kinase-like ATPases CLM98_RS04575 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS04580 SM00448 cheY-homologous receiver domain CLM98_RS04580 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS04695 SM00842 Cell division protein FtsA CLM98_RS04700 SM00864 Tubulin/FtsZ family, GTPase domain CLM98_RS04700 SM00865 Tubulin/FtsZ family, C-terminal domain CLM98_RS04720 SM00957 SecA DEAD-like domain CLM98_RS04720 SM00958 SecA preprotein cross-linking domain CLM98_RS04750 SM00829 Enoylreductase CLM98_RS04755 SM00944 Pro-kumamolisin, activation domain CLM98_RS04780 SM00642 Alpha-amylase domain CLM98_RS04815 SM00996 S-adenosyl-L-homocysteine hydrolase CLM98_RS04815 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLM98_RS04950 SM00382 ATPases associated with a variety of cellular activities CLM98_RS04970 SM00382 ATPases associated with a variety of cellular activities CLM98_RS04980 SM00448 cheY-homologous receiver domain CLM98_RS04980 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS04985 SM00387 Histidine kinase-like ATPases CLM98_RS04985 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS05040 SM00382 ATPases associated with a variety of cellular activities CLM98_RS05050 SM00382 ATPases associated with a variety of cellular activities CLM98_RS05110 SM00382 ATPases associated with a variety of cellular activities CLM98_RS05125 SM00650 Ribosomal RNA adenine dimethylases CLM98_RS05150 SM00108 Bulb-type mannose-specific lectin CLM98_RS05200 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_RS05200 SM00895 CLM98_RS05200 CLM98_RS05235 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS05310 SM00448 cheY-homologous receiver domain CLM98_RS05315 SM00387 Histidine kinase-like ATPases CLM98_RS05315 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS05315 SM00448 cheY-homologous receiver domain CLM98_RS05320 SM00421 helix_turn_helix, Lux Regulon CLM98_RS05395 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLM98_RS05395 SM00475 5'-3' exonuclease CLM98_RS05425 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CLM98_RS05425 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CLM98_RS05540 SM00852 Probable molybdopterin binding domain CLM98_RS05545 SM00028 Tetratricopeptide repeats CLM98_RS05550 SM00937 CLM98_RS05550 CLM98_RS05560 SM00028 Tetratricopeptide repeats CLM98_RS05580 SM01400 CLM98_RS05580 CLM98_RS05630 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CLM98_RS05630 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLM98_RS05635 SM00649 Ribosomal protein L11/L12 CLM98_RS05660 SM00663 RNA polymerase I subunit A N-terminus CLM98_RS05675 SM00838 Elongation factor G C-terminus CLM98_RS05675 SM00889 Elongation factor G, domain IV CLM98_RS05685 SM01403 CLM98_RS05685 CLM98_RS05705 SM01382 CLM98_RS05705 CLM98_RS05705 SM01383 CLM98_RS05705 CLM98_RS05720 SM00322 K homology RNA-binding domain CLM98_RS05740 SM01374 CLM98_RS05740 CLM98_RS05745 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLM98_RS05805 SM00363 S4 RNA-binding domain CLM98_RS05805 SM01390 CLM98_RS05805 CLM98_RS05810 SM00662 RNA polymerases D CLM98_RS05860 SM00838 Elongation factor G C-terminus CLM98_RS05900 SM00829 Enoylreductase CLM98_RS05950 SM00382 ATPases associated with a variety of cellular activities CLM98_RS05960 SM00829 Enoylreductase CLM98_RS05995 SM00855 Phosphoglycerate mutase family CLM98_RS06045 SM00014 Acid phosphatase homologues CLM98_RS06065 SM00091 PAS domain CLM98_RS06065 SM00387 Histidine kinase-like ATPases CLM98_RS06065 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS06070 SM00448 cheY-homologous receiver domain CLM98_RS06070 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS06090 SM01329 CLM98_RS06090 CLM98_RS06255 SM00382 ATPases associated with a variety of cellular activities CLM98_RS06255 SM00994 ClpX C4-type zinc finger CLM98_RS06255 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_RS06260 SM00382 ATPases associated with a variety of cellular activities CLM98_RS06260 SM00464 Found in ATP-dependent protease La (LON) CLM98_RS06265 SM00411 bacterial (prokaryotic) histone like domain CLM98_RS06290 SM00257 Lysin motif CLM98_RS06295 SM00849 Metallo-beta-lactamase superfamily CLM98_RS06310 SM00479 CLM98_RS06310 CLM98_RS06315 SM00331 Sigma factor PP2C-like phosphatases CLM98_RS06315 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CLM98_RS06340 SM00849 Metallo-beta-lactamase superfamily CLM98_RS06345 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS06415 SM00382 ATPases associated with a variety of cellular activities CLM98_RS06425 SM00493 CLM98_RS06425 CLM98_RS06440 SM00460 Transglutaminase/protease-like homologues CLM98_RS06450 SM00382 ATPases associated with a variety of cellular activities CLM98_RS06495 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLM98_RS06500 SM00822 CLM98_RS06500 CLM98_RS06510 SM00825 Beta-ketoacyl synthase CLM98_RS06545 SM00382 ATPases associated with a variety of cellular activities CLM98_RS06600 SM01359 CLM98_RS06600 CLM98_RS06600 SM01360 CLM98_RS06600 CLM98_RS06640 SM00271 DnaJ molecular chaperone homology domain CLM98_RS06645 SM00448 cheY-homologous receiver domain CLM98_RS06650 SM00244 prohibitin homologues CLM98_RS06655 SM00244 prohibitin homologues CLM98_RS06660 SM01321 CLM98_RS06660 CLM98_RS06665 SM00788 Adenylosuccinate synthetase CLM98_RS06675 SM00822 CLM98_RS06675 CLM98_RS06735 SM00220 Serine/Threonine protein kinases, catalytic domain CLM98_RS06755 SM00855 Phosphoglycerate mutase family CLM98_RS06815 SM00052 Putative diguanylate phosphodiesterase CLM98_RS06820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS06830 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLM98_RS06835 SM01092 CO dehydrogenase flavoprotein C-terminal domain CLM98_RS06850 SM00974 CLM98_RS06850 CLM98_RS06870 SM00966 SpoVT / AbrB like domain CLM98_RS06890 SM00481 DNA polymerase alpha chain like domain CLM98_RS06905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS06940 SM00091 PAS domain CLM98_RS06940 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS06960 SM01060 CLM98_RS06960 CLM98_RS07010 SM00448 cheY-homologous receiver domain CLM98_RS07010 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS07015 SM00387 Histidine kinase-like ATPases CLM98_RS07015 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS07055 SM00421 helix_turn_helix, Lux Regulon CLM98_RS07055 SM00448 cheY-homologous receiver domain CLM98_RS07070 SM00478 endonuclease III CLM98_RS07095 SM00244 prohibitin homologues CLM98_RS07180 SM00904 Riboflavin kinase CLM98_RS07225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_RS07230 SM00382 ATPases associated with a variety of cellular activities CLM98_RS07240 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS07245 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS07280 SM00387 Histidine kinase-like ATPases CLM98_RS07280 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS07285 SM00387 Histidine kinase-like ATPases CLM98_RS07285 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS07285 SM00448 cheY-homologous receiver domain CLM98_RS07310 SM00387 Histidine kinase-like ATPases CLM98_RS07310 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS07310 SM00448 cheY-homologous receiver domain CLM98_RS07320 SM00138 Methyltransferase, chemotaxis proteins CLM98_RS07325 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS07325 SM00387 Histidine kinase-like ATPases CLM98_RS07325 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS07325 SM00448 cheY-homologous receiver domain CLM98_RS07330 SM00091 PAS domain CLM98_RS07330 SM00387 Histidine kinase-like ATPases CLM98_RS07330 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS07335 SM00448 cheY-homologous receiver domain CLM98_RS07345 SM00813 Alpha-L-arabinofuranosidase C-terminus CLM98_RS07365 SM00382 ATPases associated with a variety of cellular activities CLM98_RS07365 SM00962 SRP54-type protein, GTPase domain CLM98_RS07365 SM00963 SRP54-type protein, helical bundle domain CLM98_RS07435 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CLM98_RS07435 SM00534 ATPase domain of DNA mismatch repair MUTS family CLM98_RS07460 SM00812 Alpha-L-fucosidase CLM98_RS07485 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS07535 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_RS07540 SM00838 Elongation factor G C-terminus CLM98_RS07555 SM00358 Double-stranded RNA binding motif CLM98_RS07555 SM00535 Ribonuclease III family CLM98_RS07570 SM00448 cheY-homologous receiver domain CLM98_RS07580 SM01118 CLM98_RS07580 CLM98_RS07615 SM00357 Cold shock protein domain CLM98_RS07630 SM00487 DEAD-like helicases superfamily CLM98_RS07630 SM00490 helicase superfamily c-terminal domain CLM98_RS07660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS07660 SM00267 diguanylate cyclase CLM98_RS07680 SM00869 Autotransporter beta-domain CLM98_RS07685 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLM98_RS07690 SM00671 Sel1-like repeats. CLM98_RS07690 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CLM98_RS07890 SM00382 ATPases associated with a variety of cellular activities CLM98_RS07975 SM00481 DNA polymerase alpha chain like domain CLM98_RS08015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_RS08045 SM00267 diguanylate cyclase CLM98_RS08070 SM00972 Spore Coat Protein U domain CLM98_RS08085 SM00972 Spore Coat Protein U domain CLM98_RS08095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS08115 SM01172 CLM98_RS08115 CLM98_RS08120 SM00710 Parallel beta-helix repeats CLM98_RS08120 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CLM98_RS08160 SM00434 DNA Topoisomerase IV CLM98_RS08165 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS08170 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS08195 SM01217 CLM98_RS08195 CLM98_RS08200 SM00631 CLM98_RS08200 CLM98_RS08230 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS08255 SM00382 ATPases associated with a variety of cellular activities CLM98_RS08270 SM00947 Carbonic anhydrase CLM98_RS08285 SM00357 Cold shock protein domain CLM98_RS08410 SM00267 diguanylate cyclase CLM98_RS08420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS08420 SM00267 diguanylate cyclase CLM98_RS08440 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS08455 SM00528 Domain in histone-like proteins of HNS family CLM98_RS08480 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS08585 SM00271 DnaJ molecular chaperone homology domain CLM98_RS08630 SM00382 ATPases associated with a variety of cellular activities CLM98_RS08655 SM00861 Transketolase, pyrimidine binding domain CLM98_RS08665 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CLM98_RS08685 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS08685 SM01091 Transporter associated domain CLM98_RS08715 SM00382 ATPases associated with a variety of cellular activities CLM98_RS08720 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_RS08740 SM00984 UDP binding domain CLM98_RS08760 SM00354 helix_turn _helix lactose operon repressor CLM98_RS08780 SM01018 B12 binding domain CLM98_RS08790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLM98_RS08820 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS08820 SM00357 Cold shock protein domain CLM98_RS08820 SM00955 CLM98_RS08820 CLM98_RS08830 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLM98_RS08835 SM00267 diguanylate cyclase CLM98_RS08840 SM00479 CLM98_RS08840 CLM98_RS08855 SM00382 ATPases associated with a variety of cellular activities CLM98_RS08890 SM00947 Carbonic anhydrase CLM98_RS08900 SM00478 endonuclease III CLM98_RS08925 SM00450 Rhodanese Homology Domain CLM98_RS08935 SM00644 CLM98_RS08935 CLM98_RS08955 SM00382 ATPases associated with a variety of cellular activities CLM98_RS08965 SM00981 CLM98_RS08965 CLM98_RS08995 SM00479 CLM98_RS08995 CLM98_RS09025 SM00947 Carbonic anhydrase CLM98_RS09070 SM00421 helix_turn_helix, Lux Regulon CLM98_RS09070 SM00448 cheY-homologous receiver domain CLM98_RS09140 SM00968 SMC proteins Flexible Hinge Domain CLM98_RS09145 SM00771 ZipA, C-terminal domain (FtsZ-binding) CLM98_RS09160 SM00292 breast cancer carboxy-terminal domain CLM98_RS09160 SM00532 Ligase N family CLM98_RS09185 SM00434 DNA Topoisomerase IV CLM98_RS09230 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_RS09230 SM00866 CLM98_RS09230 CLM98_RS09255 SM00240 Forkhead associated domain CLM98_RS09275 SM00830 Chorismate mutase type II CLM98_RS09365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS09365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS09375 SM00347 helix_turn_helix multiple antibiotic resistance protein CLM98_RS09385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS09385 SM00091 PAS domain CLM98_RS09385 SM00387 Histidine kinase-like ATPases CLM98_RS09385 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS09385 SM00448 cheY-homologous receiver domain CLM98_RS09390 SM00448 cheY-homologous receiver domain CLM98_RS09400 SM00382 ATPases associated with a variety of cellular activities CLM98_RS09405 SM00091 PAS domain CLM98_RS09405 SM00387 Histidine kinase-like ATPases CLM98_RS09405 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS09405 SM00448 cheY-homologous receiver domain CLM98_RS09565 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS09575 SM00382 ATPases associated with a variety of cellular activities CLM98_RS09600 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS09600 SM01091 Transporter associated domain CLM98_RS09635 SM00387 Histidine kinase-like ATPases CLM98_RS09635 SM00433 TopoisomeraseII CLM98_RS09660 SM01192 CLM98_RS09660 CLM98_RS09660 SM01193 CLM98_RS09660 CLM98_RS09685 SM00463 Small MutS-related domain CLM98_RS09705 SM00257 Lysin motif CLM98_RS09715 SM01103 CLM98_RS09715 CLM98_RS09725 SM00382 ATPases associated with a variety of cellular activities CLM98_RS09765 SM00382 ATPases associated with a variety of cellular activities CLM98_RS09780 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLM98_RS09800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS09800 SM00091 PAS domain CLM98_RS09800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS09850 SM00670 Large family of predicted nucleotide-binding domains CLM98_RS09870 SM01130 CLM98_RS09870 CLM98_RS09895 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_RS09940 SM00758 CLM98_RS09940 CLM98_RS09980 SM00646 CLM98_RS09980 CLM98_RS10060 SM00052 Putative diguanylate phosphodiesterase CLM98_RS10060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS10060 SM00267 diguanylate cyclase CLM98_RS10075 SM00448 cheY-homologous receiver domain CLM98_RS10080 SM00387 Histidine kinase-like ATPases CLM98_RS10090 SM00014 Acid phosphatase homologues CLM98_RS10180 SM00912 haemagglutination activity domain CLM98_RS10235 SM00100 Cyclic nucleotide-monophosphate binding domain CLM98_RS10235 SM00419 helix_turn_helix, cAMP Regulatory protein CLM98_RS10310 SM01007 Class II Aldolase and Adducin N-terminal domain CLM98_RS10355 SM00841 Elongation factor P, C-terminal CLM98_RS10355 SM01185 CLM98_RS10355 CLM98_RS10360 SM00822 CLM98_RS10360 CLM98_RS10380 SM00899 CLM98_RS10380 CLM98_RS10415 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CLM98_RS10425 SM00851 MGS-like domain CLM98_RS10425 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLM98_RS10480 SM00850 LytTr DNA-binding domain CLM98_RS10495 SM00448 cheY-homologous receiver domain CLM98_RS10495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS10500 SM00073 Histidine Phosphotransfer domain CLM98_RS10500 SM00387 Histidine kinase-like ATPases CLM98_RS10500 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS10500 SM00448 cheY-homologous receiver domain CLM98_RS10525 SM00966 SpoVT / AbrB like domain CLM98_RS10545 SM00052 Putative diguanylate phosphodiesterase CLM98_RS10545 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS10545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS10545 SM00091 PAS domain CLM98_RS10545 SM00267 diguanylate cyclase CLM98_RS10550 SM00448 cheY-homologous receiver domain CLM98_RS10560 SM00138 Methyltransferase, chemotaxis proteins CLM98_RS10565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10575 SM00260 Two component signalling adaptor domain CLM98_RS10590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10655 SM01049 CLM98_RS10655 CLM98_RS10665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS10665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS10670 SM00073 Histidine Phosphotransfer domain CLM98_RS10670 SM00260 Two component signalling adaptor domain CLM98_RS10670 SM00387 Histidine kinase-like ATPases CLM98_RS10670 SM01231 CLM98_RS10670 CLM98_RS10675 SM00448 cheY-homologous receiver domain CLM98_RS10685 SM00260 Two component signalling adaptor domain CLM98_RS10725 SM00220 Serine/Threonine protein kinases, catalytic domain CLM98_RS10815 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS10845 SM00073 Histidine Phosphotransfer domain CLM98_RS10845 SM00260 Two component signalling adaptor domain CLM98_RS10845 SM00387 Histidine kinase-like ATPases CLM98_RS10845 SM01231 CLM98_RS10845 CLM98_RS10855 SM00448 cheY-homologous receiver domain CLM98_RS10870 SM00382 ATPases associated with a variety of cellular activities CLM98_RS10870 SM00962 SRP54-type protein, GTPase domain CLM98_RS10885 SM00052 Putative diguanylate phosphodiesterase CLM98_RS10885 SM00267 diguanylate cyclase CLM98_RS10890 SM00267 diguanylate cyclase CLM98_RS10900 SM00267 diguanylate cyclase CLM98_RS10955 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11005 SM00822 CLM98_RS11005 CLM98_RS11030 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11035 SM00448 cheY-homologous receiver domain CLM98_RS11045 SM00421 helix_turn_helix, Lux Regulon CLM98_RS11045 SM00448 cheY-homologous receiver domain CLM98_RS11085 SM00047 Lysozyme subfamily 2 CLM98_RS11130 SM00260 Two component signalling adaptor domain CLM98_RS11130 SM00448 cheY-homologous receiver domain CLM98_RS11135 SM00858 CLM98_RS11135 CLM98_RS11150 SM00387 Histidine kinase-like ATPases CLM98_RS11155 SM00052 Putative diguanylate phosphodiesterase CLM98_RS11155 SM00267 diguanylate cyclase CLM98_RS11155 SM00448 cheY-homologous receiver domain CLM98_RS11160 SM00091 PAS domain CLM98_RS11160 SM00387 Histidine kinase-like ATPases CLM98_RS11165 SM00052 Putative diguanylate phosphodiesterase CLM98_RS11165 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS11165 SM00091 PAS domain CLM98_RS11165 SM00267 diguanylate cyclase CLM98_RS11175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS11200 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11200 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_RS11205 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS11225 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11225 SM00843 CLM98_RS11225 CLM98_RS11245 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11275 SM00562 CLM98_RS11275 CLM98_RS11285 SM00028 Tetratricopeptide repeats CLM98_RS11300 SM00564 beta-propeller repeat CLM98_RS11305 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11310 SM00852 Probable molybdopterin binding domain CLM98_RS11315 SM00450 Rhodanese Homology Domain CLM98_RS11365 SM00852 Probable molybdopterin binding domain CLM98_RS11390 SM00529 Helix-turn-helix diphteria tox regulatory element CLM98_RS11400 SM00479 CLM98_RS11400 CLM98_RS11470 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS11470 SM00732 Likely ribonuclease with RNase H fold. CLM98_RS11475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS11475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS11475 SM00091 PAS domain CLM98_RS11475 SM00387 Histidine kinase-like ATPases CLM98_RS11475 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS11475 SM00448 cheY-homologous receiver domain CLM98_RS11480 SM00448 cheY-homologous receiver domain CLM98_RS11575 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11630 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11640 SM00849 Metallo-beta-lactamase superfamily CLM98_RS11655 SM00382 ATPases associated with a variety of cellular activities CLM98_RS11670 SM00226 Low molecular weight phosphatase family CLM98_RS11680 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLM98_RS11680 SM00465 GIY-YIG type nucleases (URI domain) CLM98_RS11710 SM00823 Phosphopantetheine attachment site CLM98_RS11745 SM00984 UDP binding domain CLM98_RS11765 SM00450 Rhodanese Homology Domain CLM98_RS11770 SM00421 helix_turn_helix, Lux Regulon CLM98_RS11770 SM00448 cheY-homologous receiver domain CLM98_RS11775 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS11780 SM00363 S4 RNA-binding domain CLM98_RS11820 SM01034 Sensors of blue-light using FAD CLM98_RS11980 SM00448 cheY-homologous receiver domain CLM98_RS11980 SM00850 LytTr DNA-binding domain CLM98_RS12000 SM00869 Autotransporter beta-domain CLM98_RS12025 SM00387 Histidine kinase-like ATPases CLM98_RS12025 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS12030 SM00421 helix_turn_helix, Lux Regulon CLM98_RS12030 SM00448 cheY-homologous receiver domain CLM98_RS12035 SM00869 Autotransporter beta-domain CLM98_RS12040 SM00052 Putative diguanylate phosphodiesterase CLM98_RS12120 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS12125 SM00387 Histidine kinase-like ATPases CLM98_RS12130 SM00421 helix_turn_helix, Lux Regulon CLM98_RS12130 SM00448 cheY-homologous receiver domain CLM98_RS12135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS12170 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS12240 SM00966 SpoVT / AbrB like domain CLM98_RS12265 SM00965 Secretin and TonB N terminus short domain CLM98_RS12305 SM00382 ATPases associated with a variety of cellular activities CLM98_RS12355 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLM98_RS12355 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLM98_RS12355 SM00493 CLM98_RS12355 CLM98_RS12470 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS12515 SM00487 DEAD-like helicases superfamily CLM98_RS12765 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS12765 SM01240 CLM98_RS12765 CLM98_RS12795 SM00822 CLM98_RS12795 CLM98_RS12805 SM00028 Tetratricopeptide repeats CLM98_RS12815 SM00411 bacterial (prokaryotic) histone like domain CLM98_RS12820 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS12900 SM00354 helix_turn _helix lactose operon repressor CLM98_RS12925 SM00363 S4 RNA-binding domain CLM98_RS12950 SM00382 ATPases associated with a variety of cellular activities CLM98_RS13000 SM00357 Cold shock protein domain CLM98_RS13005 SM00382 ATPases associated with a variety of cellular activities CLM98_RS13010 SM00382 ATPases associated with a variety of cellular activities CLM98_RS13040 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CLM98_RS13055 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CLM98_RS13070 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLM98_RS13110 SM00840 CLM98_RS13110 CLM98_RS13130 SM01234 CLM98_RS13130 CLM98_RS13175 SM00849 Metallo-beta-lactamase superfamily CLM98_RS13200 SM00656 CLM98_RS13200 CLM98_RS13240 SM00841 Elongation factor P, C-terminal CLM98_RS13240 SM01185 CLM98_RS13240 CLM98_RS13250 SM00052 Putative diguanylate phosphodiesterase CLM98_RS13250 SM00267 diguanylate cyclase CLM98_RS13250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS13290 SM00382 ATPases associated with a variety of cellular activities CLM98_RS13295 SM00487 DEAD-like helicases superfamily CLM98_RS13295 SM00490 helicase superfamily c-terminal domain CLM98_RS13320 SM00357 Cold shock protein domain CLM98_RS13325 SM01322 CLM98_RS13325 CLM98_RS13335 SM00052 Putative diguanylate phosphodiesterase CLM98_RS13335 SM00267 diguanylate cyclase CLM98_RS13350 SM00822 CLM98_RS13350 CLM98_RS13375 SM00853 MutL C terminal dimerisation domain CLM98_RS13375 SM01340 CLM98_RS13375 CLM98_RS13380 SM00646 CLM98_RS13380 CLM98_RS13425 SM00474 3'-5' exonuclease CLM98_RS13440 SM00528 Domain in histone-like proteins of HNS family CLM98_RS13520 SM00857 Resolvase, N terminal domain CLM98_RS13590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS13590 SM00267 diguanylate cyclase CLM98_RS13595 SM00260 Two component signalling adaptor domain CLM98_RS13600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS13600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS13610 SM00487 DEAD-like helicases superfamily CLM98_RS13610 SM00490 helicase superfamily c-terminal domain CLM98_RS13675 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS13700 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS13700 SM01091 Transporter associated domain CLM98_RS13730 SM00382 ATPases associated with a variety of cellular activities CLM98_RS13760 SM01230 CLM98_RS13760 CLM98_RS13770 SM01230 CLM98_RS13770 CLM98_RS13780 SM00267 diguanylate cyclase CLM98_RS13780 SM00448 cheY-homologous receiver domain CLM98_RS13840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS13840 SM00091 PAS domain CLM98_RS13840 SM00387 Histidine kinase-like ATPases CLM98_RS13840 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS13840 SM00448 cheY-homologous receiver domain CLM98_RS13840 SM01079 CLM98_RS13840 CLM98_RS13845 SM00448 cheY-homologous receiver domain CLM98_RS13845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS13880 SM00354 helix_turn _helix lactose operon repressor CLM98_RS13950 SM01323 CLM98_RS13950 CLM98_RS13965 SM00344 helix_turn_helix ASNC type CLM98_RS14040 SM00387 Histidine kinase-like ATPases CLM98_RS14095 SM00944 Pro-kumamolisin, activation domain CLM98_RS14155 SM01130 CLM98_RS14155 CLM98_RS14180 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS14185 SM00382 ATPases associated with a variety of cellular activities CLM98_RS14185 SM00962 SRP54-type protein, GTPase domain CLM98_RS14185 SM00963 SRP54-type protein, helical bundle domain CLM98_RS14195 SM00478 endonuclease III CLM98_RS14205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS14205 SM00091 PAS domain CLM98_RS14205 SM00387 Histidine kinase-like ATPases CLM98_RS14205 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS14205 SM00448 cheY-homologous receiver domain CLM98_RS14220 SM00465 GIY-YIG type nucleases (URI domain) CLM98_RS14255 SM00507 HNH nucleases CLM98_RS14260 SM00861 Transketolase, pyrimidine binding domain CLM98_RS14285 SM00849 Metallo-beta-lactamase superfamily CLM98_RS14370 SM00422 helix_turn_helix, mercury resistance CLM98_RS14375 SM00411 bacterial (prokaryotic) histone like domain CLM98_RS14380 SM00873 B3/4 domain CLM98_RS14380 SM00874 tRNA synthetase B5 domain CLM98_RS14380 SM00896 Ferredoxin-fold anticodon binding domain CLM98_RS14405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLM98_RS14410 SM00354 helix_turn _helix lactose operon repressor CLM98_RS14415 SM00642 Alpha-amylase domain CLM98_RS14445 SM00642 Alpha-amylase domain CLM98_RS14500 SM00382 ATPases associated with a variety of cellular activities CLM98_RS14565 SM00487 DEAD-like helicases superfamily CLM98_RS14565 SM00490 helicase superfamily c-terminal domain CLM98_RS14845 SM01001 AIR carboxylase CLM98_RS14865 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS14865 SM00322 K homology RNA-binding domain CLM98_RS14870 SM01387 CLM98_RS14870 CLM98_RS14890 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS14890 SM00322 K homology RNA-binding domain CLM98_RS14940 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLM98_RS14945 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLM98_RS14990 SM00822 CLM98_RS14990 CLM98_RS15005 SM00052 Putative diguanylate phosphodiesterase CLM98_RS15005 SM00267 diguanylate cyclase CLM98_RS15005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS15075 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLM98_RS15105 SM00257 Lysin motif CLM98_RS15145 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS15220 SM01160 CLM98_RS15220 CLM98_RS15275 SM00098 Alkaline phosphatase homologues CLM98_RS15285 SM00977 TilS substrate C-terminal domain CLM98_RS15300 SM01351 CLM98_RS15300 CLM98_RS15335 SM00316 Ribosomal protein S1-like RNA-binding domain CLM98_RS15475 SM00382 ATPases associated with a variety of cellular activities CLM98_RS15510 SM00448 cheY-homologous receiver domain CLM98_RS15510 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS15515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS15515 SM00387 Histidine kinase-like ATPases CLM98_RS15515 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS15550 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS15550 SM00267 diguanylate cyclase CLM98_RS15555 SM00363 S4 RNA-binding domain CLM98_RS15560 SM00052 Putative diguanylate phosphodiesterase CLM98_RS15560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS15560 SM00091 PAS domain CLM98_RS15560 SM00267 diguanylate cyclase CLM98_RS15565 SM00487 DEAD-like helicases superfamily CLM98_RS15565 SM00490 helicase superfamily c-terminal domain CLM98_RS15610 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS15610 SM00478 endonuclease III CLM98_RS15610 SM01009 AlkA N-terminal domain CLM98_RS15630 SM00829 Enoylreductase CLM98_RS15705 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS15775 SM00645 Papain family cysteine protease CLM98_RS15780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS15780 SM00387 Histidine kinase-like ATPases CLM98_RS15780 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS15785 SM00448 cheY-homologous receiver domain CLM98_RS15785 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS15800 SM00487 DEAD-like helicases superfamily CLM98_RS15800 SM00490 helicase superfamily c-terminal domain CLM98_RS15800 SM00982 CLM98_RS15800 CLM98_RS15800 SM01058 CarD-like/TRCF domain CLM98_RS15835 SM00073 Histidine Phosphotransfer domain CLM98_RS15835 SM00260 Two component signalling adaptor domain CLM98_RS15835 SM00387 Histidine kinase-like ATPases CLM98_RS15835 SM01231 CLM98_RS15835 CLM98_RS15840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS15840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS15845 SM00260 Two component signalling adaptor domain CLM98_RS15850 SM00052 Putative diguanylate phosphodiesterase CLM98_RS15850 SM00448 cheY-homologous receiver domain CLM98_RS15855 SM00138 Methyltransferase, chemotaxis proteins CLM98_RS15860 SM00448 cheY-homologous receiver domain CLM98_RS15865 SM00155 Phospholipase D. Active site motifs. CLM98_RS15880 SM00855 Phosphoglycerate mutase family CLM98_RS15930 SM00248 ankyrin repeats CLM98_RS15985 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CLM98_RS15990 SM01092 CO dehydrogenase flavoprotein C-terminal domain CLM98_RS16000 SM00829 Enoylreductase CLM98_RS16005 SM00267 diguanylate cyclase CLM98_RS16010 SM00487 DEAD-like helicases superfamily CLM98_RS16110 SM00732 Likely ribonuclease with RNase H fold. CLM98_RS16160 SM00411 bacterial (prokaryotic) histone like domain CLM98_RS16190 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain CLM98_RS16205 SM00382 ATPases associated with a variety of cellular activities CLM98_RS16235 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CLM98_RS16240 SM00671 Sel1-like repeats. CLM98_RS16270 SM00054 EF-hand, calcium binding motif CLM98_RS16360 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS16380 SM00382 ATPases associated with a variety of cellular activities CLM98_RS16430 SM00924 MgtE intracellular N domain CLM98_RS16470 SM00656 CLM98_RS16470 CLM98_RS16490 SM00421 helix_turn_helix, Lux Regulon CLM98_RS16530 SM00849 Metallo-beta-lactamase superfamily CLM98_RS16540 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CLM98_RS16565 SM00422 helix_turn_helix, mercury resistance CLM98_RS16705 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS16715 SM00387 Histidine kinase-like ATPases CLM98_RS16715 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS16715 SM00448 cheY-homologous receiver domain CLM98_RS16720 SM00387 Histidine kinase-like ATPases CLM98_RS16720 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS16720 SM00448 cheY-homologous receiver domain CLM98_RS16730 SM00387 Histidine kinase-like ATPases CLM98_RS16730 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS16730 SM00448 cheY-homologous receiver domain CLM98_RS16735 SM00867 YceI-like domain CLM98_RS16745 SM00867 YceI-like domain CLM98_RS16805 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS16835 SM00028 Tetratricopeptide repeats CLM98_RS16935 SM00812 Alpha-L-fucosidase CLM98_RS16940 SM00636 CLM98_RS16940 CLM98_RS16955 SM00758 CLM98_RS16955 CLM98_RS16955 SM01217 CLM98_RS16955 CLM98_RS16985 SM01149 CLM98_RS16985 CLM98_RS17025 SM00369 Leucine-rich repeats, typical (most populated) subfamily CLM98_RS17060 SM00260 Two component signalling adaptor domain CLM98_RS17070 SM00073 Histidine Phosphotransfer domain CLM98_RS17070 SM00260 Two component signalling adaptor domain CLM98_RS17070 SM00387 Histidine kinase-like ATPases CLM98_RS17070 SM00448 cheY-homologous receiver domain CLM98_RS17070 SM01231 CLM98_RS17070 CLM98_RS17075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS17080 SM00260 Two component signalling adaptor domain CLM98_RS17085 SM00448 cheY-homologous receiver domain CLM98_RS17090 SM00448 cheY-homologous receiver domain CLM98_RS17115 SM00491 CLM98_RS17115 CLM98_RS17150 SM00954 Region found in RelA / SpoT proteins CLM98_RS17205 SM00382 ATPases associated with a variety of cellular activities CLM98_RS17205 SM00487 DEAD-like helicases superfamily CLM98_RS17205 SM00490 helicase superfamily c-terminal domain CLM98_RS17205 SM00847 Helicase associated domain (HA2) Add an annotation CLM98_RS17220 SM00341 Helicase and RNase D C-terminal CLM98_RS17220 SM00487 DEAD-like helicases superfamily CLM98_RS17220 SM00490 helicase superfamily c-terminal domain CLM98_RS17220 SM00956 CLM98_RS17220 CLM98_RS17230 SM00448 cheY-homologous receiver domain CLM98_RS17255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS17255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS17270 SM00448 cheY-homologous receiver domain CLM98_RS17275 SM00091 PAS domain CLM98_RS17275 SM00911 HWE histidine kinase CLM98_RS17330 SM00382 ATPases associated with a variety of cellular activities CLM98_RS17345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLM98_RS17380 SM00834 Putative regulatory protein CLM98_RS17430 SM00382 ATPases associated with a variety of cellular activities CLM98_RS17540 SM00855 Phosphoglycerate mutase family CLM98_RS17590 SM00382 ATPases associated with a variety of cellular activities CLM98_RS17590 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_RS17595 SM00382 ATPases associated with a variety of cellular activities CLM98_RS17605 SM00062 Bacterial periplasmic substrate-binding proteins CLM98_RS17685 SM00564 beta-propeller repeat CLM98_RS17695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS17785 SM01126 CLM98_RS17785 CLM98_RS17795 SM00881 CoA binding domain CLM98_RS17805 SM00387 Histidine kinase-like ATPases CLM98_RS17805 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS17810 SM00382 ATPases associated with a variety of cellular activities CLM98_RS17810 SM00448 cheY-homologous receiver domain CLM98_RS17890 SM00387 Histidine kinase-like ATPases CLM98_RS17890 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS17895 SM00448 cheY-homologous receiver domain CLM98_RS17895 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS17910 SM00642 Alpha-amylase domain CLM98_RS17920 SM00528 Domain in histone-like proteins of HNS family CLM98_RS17930 SM00318 Staphylococcal nuclease homologues CLM98_RS18005 SM00387 Histidine kinase-like ATPases CLM98_RS18005 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS18010 SM00448 cheY-homologous receiver domain CLM98_RS18030 SM01034 Sensors of blue-light using FAD CLM98_RS18040 SM00646 CLM98_RS18040 CLM98_RS18090 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS18110 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS18110 SM00387 Histidine kinase-like ATPases CLM98_RS18140 SM00255 Toll - interleukin 1 - resistance CLM98_RS18160 SM00869 Autotransporter beta-domain CLM98_RS18220 SM00354 helix_turn _helix lactose operon repressor CLM98_RS18250 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLM98_RS18375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS18375 SM00387 Histidine kinase-like ATPases CLM98_RS18410 SM00506 Appr-1"-p processing enzyme CLM98_RS18465 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLM98_RS18490 SM00849 Metallo-beta-lactamase superfamily CLM98_RS18505 SM00382 ATPases associated with a variety of cellular activities CLM98_RS18565 SM00861 Transketolase, pyrimidine binding domain CLM98_RS18585 SM00028 Tetratricopeptide repeats CLM98_RS18585 SM00327 von Willebrand factor (vWF) type A domain CLM98_RS18590 SM00327 von Willebrand factor (vWF) type A domain CLM98_RS18605 SM00382 ATPases associated with a variety of cellular activities CLM98_RS18615 SM00965 Secretin and TonB N terminus short domain CLM98_RS18665 SM00487 DEAD-like helicases superfamily CLM98_RS18665 SM00490 helicase superfamily c-terminal domain CLM98_RS18675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS18675 SM00954 Region found in RelA / SpoT proteins CLM98_RS18680 SM01409 CLM98_RS18680 CLM98_RS18685 SM00072 Guanylate kinase homologues. CLM98_RS18710 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS18735 SM01011 Aminopeptidase P, N-terminal domain CLM98_RS18810 SM00028 Tetratricopeptide repeats CLM98_RS18810 SM00382 ATPases associated with a variety of cellular activities CLM98_RS18810 SM00421 helix_turn_helix, Lux Regulon CLM98_RS18885 SM00464 Found in ATP-dependent protease La (LON) CLM98_RS18935 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS18940 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS18960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS18990 SM00917 LeuA allosteric (dimerisation) domain CLM98_RS18995 SM01329 CLM98_RS18995 CLM98_RS19015 SM00267 diguanylate cyclase CLM98_RS19065 SM00919 Malic enzyme, NAD binding domain CLM98_RS19065 SM01274 CLM98_RS19065 CLM98_RS19080 SM00387 Histidine kinase-like ATPases CLM98_RS19080 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS19080 SM00448 cheY-homologous receiver domain CLM98_RS19115 SM00421 helix_turn_helix, Lux Regulon CLM98_RS19115 SM00448 cheY-homologous receiver domain CLM98_RS19125 SM00387 Histidine kinase-like ATPases CLM98_RS19125 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS19130 SM00448 cheY-homologous receiver domain CLM98_RS19130 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS19150 SM00822 CLM98_RS19150 CLM98_RS19155 SM00354 helix_turn _helix lactose operon repressor CLM98_RS19170 SM00642 Alpha-amylase domain CLM98_RS19180 SM01154 CLM98_RS19180 CLM98_RS19225 SM00450 Rhodanese Homology Domain CLM98_RS19300 SM00028 Tetratricopeptide repeats CLM98_RS19385 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLM98_RS19385 SM00866 CLM98_RS19385 CLM98_RS19450 SM00382 ATPases associated with a variety of cellular activities CLM98_RS19480 SM01211 CLM98_RS19480 CLM98_RS19555 SM00656 CLM98_RS19555 CLM98_RS19585 SM00528 Domain in histone-like proteins of HNS family CLM98_RS19600 SM00382 ATPases associated with a variety of cellular activities CLM98_RS19630 SM00882 Coenzyme A transferase CLM98_RS19635 SM00882 Coenzyme A transferase CLM98_RS19655 SM00984 UDP binding domain CLM98_RS19680 SM00893 Electron transfer flavoprotein domain CLM98_RS19685 SM00893 Electron transfer flavoprotein domain CLM98_RS19755 SM00382 ATPases associated with a variety of cellular activities CLM98_RS19770 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS19815 SM00487 DEAD-like helicases superfamily CLM98_RS19815 SM00490 helicase superfamily c-terminal domain CLM98_RS19855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS19890 SM00825 Beta-ketoacyl synthase CLM98_RS19965 SM00382 ATPases associated with a variety of cellular activities CLM98_RS19990 SM00387 Histidine kinase-like ATPases CLM98_RS20005 SM00830 Chorismate mutase type II CLM98_RS20015 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20085 SM00986 Uracil DNA glycosylase superfamily CLM98_RS20085 SM00987 UreE urease accessory protein, C-terminal domain CLM98_RS20120 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20120 SM00930 CLM98_RS20120 CLM98_RS20140 SM00387 Histidine kinase-like ATPases CLM98_RS20140 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS20140 SM00448 cheY-homologous receiver domain CLM98_RS20195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLM98_RS20195 SM00091 PAS domain CLM98_RS20195 SM00387 Histidine kinase-like ATPases CLM98_RS20195 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS20195 SM00448 cheY-homologous receiver domain CLM98_RS20215 SM01005 Alanine racemase, C-terminal domain CLM98_RS20225 SM00344 helix_turn_helix ASNC type CLM98_RS20285 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20300 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CLM98_RS20305 SM00986 Uracil DNA glycosylase superfamily CLM98_RS20305 SM00987 UreE urease accessory protein, C-terminal domain CLM98_RS20310 SM00729 Elongator protein 3, MiaB family, Radical SAM CLM98_RS20380 SM00448 cheY-homologous receiver domain CLM98_RS20380 SM00850 LytTr DNA-binding domain CLM98_RS20385 SM00387 Histidine kinase-like ATPases CLM98_RS20435 SM00091 PAS domain CLM98_RS20435 SM00138 Methyltransferase, chemotaxis proteins CLM98_RS20435 SM00911 HWE histidine kinase CLM98_RS20440 SM00448 cheY-homologous receiver domain CLM98_RS20450 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20450 SM00448 cheY-homologous receiver domain CLM98_RS20510 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20585 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20590 SM00631 CLM98_RS20590 CLM98_RS20630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLM98_RS20630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS20635 SM00477 DNA/RNA non-specific endonuclease CLM98_RS20635 SM00892 DNA/RNA non-specific endonuclease CLM98_RS20805 SM00257 Lysin motif CLM98_RS20830 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLM98_RS20830 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLM98_RS20830 SM00493 CLM98_RS20830 CLM98_RS20885 SM00487 DEAD-like helicases superfamily CLM98_RS20885 SM00490 helicase superfamily c-terminal domain CLM98_RS20920 SM00986 Uracil DNA glycosylase superfamily CLM98_RS20920 SM00987 UreE urease accessory protein, C-terminal domain CLM98_RS20925 SM00448 cheY-homologous receiver domain CLM98_RS20935 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20940 SM00487 DEAD-like helicases superfamily CLM98_RS20940 SM00490 helicase superfamily c-terminal domain CLM98_RS20950 SM00357 Cold shock protein domain CLM98_RS20950 SM00382 ATPases associated with a variety of cellular activities CLM98_RS20950 SM00959 Rho termination factor, N-terminal domain CLM98_RS20985 SM00487 DEAD-like helicases superfamily CLM98_RS21025 SM00257 Lysin motif CLM98_RS21055 SM01150 CLM98_RS21055 CLM98_RS21115 SM00644 CLM98_RS21115 CLM98_RS21125 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_RS21160 SM01217 CLM98_RS21160 CLM98_RS21165 SM00905 Dihydroneopterin aldolase CLM98_RS21195 SM00400 zinc finger CLM98_RS21195 SM00493 CLM98_RS21195 CLM98_RS21195 SM00766 DNA primase DnaG DnaB-binding CLM98_RS21300 SM00363 S4 RNA-binding domain CLM98_RS21345 SM00470 ParB-like nuclease domain CLM98_RS21370 SM01259 CLM98_RS21370 CLM98_RS21400 SM00836 DALR anticodon binding domain CLM98_RS21400 SM01016 Arginyl tRNA synthetase N terminal dom CLM98_RS21430 SM00823 Phosphopantetheine attachment site CLM98_RS21430 SM00824 Thioesterase CLM98_RS21475 SM00938 Nitrogen regulatory protein P-II CLM98_RS21485 SM00382 ATPases associated with a variety of cellular activities CLM98_RS21500 SM00052 Putative diguanylate phosphodiesterase CLM98_RS21530 SM00244 prohibitin homologues CLM98_RS21575 SM00448 cheY-homologous receiver domain CLM98_RS21575 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS21580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLM98_RS21580 SM00387 Histidine kinase-like ATPases CLM98_RS21580 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS21610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_RS21655 SM01060 CLM98_RS21655 CLM98_RS21670 SM00421 helix_turn_helix, Lux Regulon CLM98_RS21670 SM00448 cheY-homologous receiver domain CLM98_RS21685 SM00382 ATPases associated with a variety of cellular activities CLM98_RS21730 SM00849 Metallo-beta-lactamase superfamily CLM98_RS21760 SM00960 Roadblock/LC7 domain CLM98_RS21835 SM00387 Histidine kinase-like ATPases CLM98_RS21835 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS21840 SM00448 cheY-homologous receiver domain CLM98_RS21840 SM00862 Transcriptional regulatory protein, C terminal CLM98_RS21865 SM00248 ankyrin repeats CLM98_RS21880 SM00491 CLM98_RS21880 CLM98_RS21910 SM00477 DNA/RNA non-specific endonuclease CLM98_RS21910 SM00892 DNA/RNA non-specific endonuclease CLM98_RS21930 SM01004 Delta-aminolevulinic acid dehydratase CLM98_RS21975 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CLM98_RS21995 SM00382 ATPases associated with a variety of cellular activities CLM98_RS22005 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS22045 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS22055 SM00382 ATPases associated with a variety of cellular activities CLM98_RS22125 SM00881 CoA binding domain CLM98_RS22130 SM00116 Domain in cystathionine beta-synthase and other proteins. CLM98_RS22130 SM00924 MgtE intracellular N domain CLM98_RS22160 SM00248 ankyrin repeats CLM98_RS22170 SM00825 Beta-ketoacyl synthase CLM98_RS22200 SM00822 CLM98_RS22200 CLM98_RS22240 SM00563 Phosphate acyltransferases CLM98_RS22310 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLM98_RS22310 SM00474 3'-5' exonuclease CLM98_RS22310 SM00475 5'-3' exonuclease CLM98_RS22310 SM00482 DNA polymerase A domain CLM98_RS22325 SM00912 haemagglutination activity domain CLM98_RS22345 SM00331 Sigma factor PP2C-like phosphatases CLM98_RS22345 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CLM98_RS22370 SM00240 Forkhead associated domain CLM98_RS22385 SM00028 Tetratricopeptide repeats CLM98_RS22395 SM00220 Serine/Threonine protein kinases, catalytic domain CLM98_RS22420 SM00965 Secretin and TonB N terminus short domain CLM98_RS22430 SM00915 Jacalin-like lectin domain CLM98_RS22460 SM00382 ATPases associated with a variety of cellular activities CLM98_RS22460 SM01086 C-terminal, D2-small domain, of ClpB protein CLM98_RS22500 SM00342 helix_turn_helix, arabinose operon control protein CLM98_RS22510 SM01266 CLM98_RS22510 CLM98_RS22530 SM00155 Phospholipase D. Active site motifs. CLM98_RS22670 SM00421 helix_turn_helix, Lux Regulon CLM98_RS22670 SM00448 cheY-homologous receiver domain CLM98_RS22730 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_RS22750 SM00346 helix_turn_helix isocitrate lyase regulation CLM98_RS22760 SM00091 PAS domain CLM98_RS22760 SM00387 Histidine kinase-like ATPases CLM98_RS22760 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS22760 SM00448 cheY-homologous receiver domain CLM98_RS22795 SM00564 beta-propeller repeat CLM98_RS22850 SM00836 DALR anticodon binding domain CLM98_RS22860 SM00382 ATPases associated with a variety of cellular activities CLM98_RS22950 SM00354 helix_turn _helix lactose operon repressor CLM98_RS22965 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLM98_RS22975 SM00758 CLM98_RS22975 CLM98_RS22975 SM01217 CLM98_RS22975 CLM98_RS23005 SM00612 CLM98_RS23005 CLM98_RS23035 SM01007 Class II Aldolase and Adducin N-terminal domain CLM98_RS23065 SM00633 Glycosyl hydrolase family 10 CLM98_RS23080 SM00633 Glycosyl hydrolase family 10 CLM98_RS23090 SM00633 Glycosyl hydrolase family 10 CLM98_RS23165 SM00829 Enoylreductase CLM98_RS23170 SM00563 Phosphate acyltransferases CLM98_RS23185 SM00354 helix_turn _helix lactose operon repressor CLM98_RS23205 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CLM98_RS23245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLM98_RS23245 SM00388 His Kinase A (phosphoacceptor) domain CLM98_RS23260 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CLM98_RS23260 SM01232 CLM98_RS23260 CLM98_RS23355 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS23405 SM00491 CLM98_RS23405 CLM98_RS23425 SM00448 cheY-homologous receiver domain CLM98_RS23470 SM00047 Lysozyme subfamily 2 CLM98_RS23505 SM00318 Staphylococcal nuclease homologues CLM98_RS23525 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLM98_RS23540 SM00487 DEAD-like helicases superfamily CLM98_RS23540 SM00490 helicase superfamily c-terminal domain CLM98_RS23560 SM00480 DNA polymerase III beta subunit CLM98_RS23565 SM00470 ParB-like nuclease domain CLM98_RS23635 SM00487 DEAD-like helicases superfamily CLM98_RS23660 SM00487 DEAD-like helicases superfamily CLM98_RS23660 SM00490 helicase superfamily c-terminal domain CLM98_RS23665 SM00671 Sel1-like repeats. CLM98_RS23670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLM98_RS23950 SM00530 Helix-turn-helix XRE-family like proteins CLM98_RS24005 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLM98_RS24010 SM00226 Low molecular weight phosphatase family CLM98_RS24060 SM00422 helix_turn_helix, mercury resistance CLM98_RS24240 SM00248 ankyrin repeats CLM98_RS24365 SM00470 ParB-like nuclease domain CLM98_RS24505 SM00470 ParB-like nuclease domain CLM98_RS24735 SM00857 Resolvase, N terminal domain CLM98_RS24770 SM00670 Large family of predicted nucleotide-binding domains CLM98_RS24780 SM00857 Resolvase, N terminal domain CLM98_RS24965 SM00966 SpoVT / AbrB like domain CLM98_RS24970 SM00857 Resolvase, N terminal domain CLM98_RS25020 SM00857 Resolvase, N terminal domain CLM98_RS25030 SM00670 Large family of predicted nucleotide-binding domains