locus-tag class description AMD17_RS00025 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD17_RS00025 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD17_RS00025 PF02767 DNA polymerase III beta subunit, central domain AMD17_RS00050 PF00204 DNA gyrase B AMD17_RS00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS00050 PF18053 DNA gyrase B subunit insert domain AMD17_RS00050 PF01751 Toprim domain AMD17_RS00050 PF00986 DNA gyrase B subunit, carboxyl terminus AMD17_RS00070 PF01435 Peptidase family M48 AMD17_RS00240 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD17_RS00295 PF00150 Cellulase (glycosyl hydrolase family 5) AMD17_RS00340 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS00340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD17_RS00355 PF00310 Glutamine amidotransferases class-II AMD17_RS00355 PF01493 GXGXG motif AMD17_RS00355 PF01645 Conserved region in glutamate synthase AMD17_RS00355 PF04898 Glutamate synthase central domain AMD17_RS00365 PF00310 Glutamine amidotransferases class-II AMD17_RS00365 PF04898 Glutamate synthase central domain AMD17_RS00365 PF01645 Conserved region in glutamate synthase AMD17_RS00365 PF01493 GXGXG motif AMD17_RS00465 PF13537 Glutamine amidotransferase domain AMD17_RS00465 PF00733 Asparagine synthase AMD17_RS00485 PF11638 DnaA N-terminal domain AMD17_RS00485 PF08299 Bacterial dnaA protein helix-turn-helix AMD17_RS00485 PF00308 Bacterial dnaA protein AMD17_RS00490 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD17_RS00490 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD17_RS00490 PF02767 DNA polymerase III beta subunit, central domain AMD17_RS00495 PF02463 RecF/RecN/SMC N terminal domain AMD17_RS00500 PF00986 DNA gyrase B subunit, carboxyl terminus AMD17_RS00500 PF18053 DNA gyrase B subunit insert domain AMD17_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS00500 PF01751 Toprim domain AMD17_RS00500 PF00204 DNA gyrase B AMD17_RS00510 PF01435 Peptidase family M48 AMD17_RS00520 PF03544 Gram-negative bacterial TonB protein C-terminal AMD17_RS00525 PF01618 MotA/TolQ/ExbB proton channel family AMD17_RS00530 PF02472 Biopolymer transport protein ExbD/TolR AMD17_RS00535 PF02472 Biopolymer transport protein ExbD/TolR AMD17_RS00540 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD17_RS00550 PF13396 Phospholipase_D-nuclease N-terminal AMD17_RS00550 PF13091 PLD-like domain AMD17_RS00565 PF04055 Radical SAM superfamily AMD17_RS00575 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD17_RS00590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD17_RS00590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD17_RS00595 PF03572 Peptidase family S41 AMD17_RS00595 PF13180 PDZ domain AMD17_RS00600 PF01551 Peptidase family M23 AMD17_RS00610 PF04389 Peptidase family M28 AMD17_RS00620 PF00150 Cellulase (glycosyl hydrolase family 5) AMD17_RS00625 PF00150 Cellulase (glycosyl hydrolase family 5) AMD17_RS00630 PF00150 Cellulase (glycosyl hydrolase family 5) AMD17_RS00635 PF00107 Zinc-binding dehydrogenase AMD17_RS00635 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS00640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD17_RS00640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS00645 PF01493 GXGXG motif AMD17_RS00645 PF04898 Glutamate synthase central domain AMD17_RS00645 PF00310 Glutamine amidotransferases class-II AMD17_RS00645 PF01645 Conserved region in glutamate synthase AMD17_RS00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS00675 PF03466 LysR substrate binding domain AMD17_RS00690 PF02397 Bacterial sugar transferase AMD17_RS00695 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD17_RS00705 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD17_RS00710 PF13439 Glycosyltransferase Family 4 AMD17_RS00710 PF00534 Glycosyl transferases group 1 AMD17_RS00730 PF13537 Glutamine amidotransferase domain AMD17_RS00730 PF00733 Asparagine synthase AMD17_RS00745 PF16363 GDP-mannose 4,6 dehydratase AMD17_RS00760 PF00664 ABC transporter transmembrane region AMD17_RS00760 PF00005 ABC transporter AMD17_RS00775 PF00733 Asparagine synthase AMD17_RS00775 PF13537 Glutamine amidotransferase domain AMD17_RS00790 PF02603 HPr Serine kinase N terminus AMD17_RS00790 PF07475 HPr Serine kinase C-terminal domain AMD17_RS00795 PF00685 Sulfotransferase domain AMD17_RS00870 PF00270 DEAD/DEAH box helicase AMD17_RS00870 PF09369 Domain of unknown function (DUF1998) AMD17_RS00870 PF00271 Helicase conserved C-terminal domain AMD17_RS00875 PF03006 Haemolysin-III related AMD17_RS00890 PF00106 short chain dehydrogenase AMD17_RS00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS00900 PF03466 LysR substrate binding domain AMD17_RS00915 PF02525 Flavodoxin-like fold AMD17_RS00975 PF05532 CsbD-like AMD17_RS00995 PF16485 Protealysin propeptide AMD17_RS00995 PF01447 Thermolysin metallopeptidase, catalytic domain AMD17_RS00995 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD17_RS01005 PF00293 NUDIX domain AMD17_RS01005 PF13344 Haloacid dehalogenase-like hydrolase AMD17_RS01025 PF00085 Thioredoxin AMD17_RS01035 PF00083 Sugar (and other) transporter AMD17_RS01035 PF08946 Osmosensory transporter coiled coil AMD17_RS01075 PF07726 ATPase family associated with various cellular activities (AAA) AMD17_RS01075 PF17863 AAA lid domain AMD17_RS01105 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMD17_RS01110 PF00155 Aminotransferase class I and II AMD17_RS01115 PF00593 TonB dependent receptor AMD17_RS01115 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS01125 PF07883 Cupin domain AMD17_RS01130 PF00171 Aldehyde dehydrogenase family AMD17_RS01150 PF02735 Ku70/Ku80 beta-barrel domain AMD17_RS01155 PF01070 FMN-dependent dehydrogenase AMD17_RS01165 PF00144 Beta-lactamase AMD17_RS01170 PF07730 Histidine kinase AMD17_RS01175 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS01175 PF00072 Response regulator receiver domain AMD17_RS01195 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS01195 PF18500 CadC C-terminal domain 1 AMD17_RS01200 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD17_RS01200 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD17_RS01200 PF07055 Enoyl reductase FAD binding domain AMD17_RS01210 PF00294 pfkB family carbohydrate kinase AMD17_RS01270 PF13276 HTH-like domain AMD17_RS01270 PF00665 Integrase core domain AMD17_RS01270 PF13333 Integrase core domain AMD17_RS01275 PF00128 Alpha amylase, catalytic domain AMD17_RS01275 PF11896 Domain of unknown function (DUF3416) AMD17_RS01280 PF00128 Alpha amylase, catalytic domain AMD17_RS01280 PF16657 Maltogenic Amylase, C-terminal domain AMD17_RS01285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD17_RS01285 PF02806 Alpha amylase, C-terminal all-beta domain AMD17_RS01285 PF00128 Alpha amylase, catalytic domain AMD17_RS01295 PF00248 Aldo/keto reductase family AMD17_RS01300 PF00135 Carboxylesterase family AMD17_RS01305 PF13472 GDSL-like Lipase/Acylhydrolase family AMD17_RS01305 PF07859 alpha/beta hydrolase fold AMD17_RS01315 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD17_RS01325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMD17_RS01330 PF04616 Glycosyl hydrolases family 43 AMD17_RS01330 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD17_RS01335 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS01340 PF04962 KduI/IolB family AMD17_RS01355 PF00657 GDSL-like Lipase/Acylhydrolase AMD17_RS01370 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD17_RS01375 PF01037 Lrp/AsnC ligand binding domain AMD17_RS01380 PF07660 Secretin and TonB N terminus short domain AMD17_RS01380 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS01380 PF00593 TonB dependent receptor AMD17_RS01385 PF01734 Patatin-like phospholipase AMD17_RS01395 PF00005 ABC transporter AMD17_RS01410 PF00005 ABC transporter AMD17_RS01415 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS01425 PF12867 DinB superfamily AMD17_RS01425 PF03781 Sulfatase-modifying factor enzyme 1 AMD17_RS01445 PF01381 Helix-turn-helix AMD17_RS01470 PF10609 NUBPL iron-transfer P-loop NTPase AMD17_RS01470 PF01883 Iron-sulfur cluster assembly protein AMD17_RS01485 PF13091 PLD-like domain AMD17_RS01490 PF03061 Thioesterase superfamily AMD17_RS01520 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS01520 PF00107 Zinc-binding dehydrogenase AMD17_RS01530 PF02673 Bacitracin resistance protein BacA AMD17_RS01535 PF03951 Glutamine synthetase, beta-Grasp domain AMD17_RS01535 PF00120 Glutamine synthetase, catalytic domain AMD17_RS01540 PF00543 Nitrogen regulatory protein P-II AMD17_RS01545 PF00909 Ammonium Transporter Family AMD17_RS01550 PF00989 PAS fold AMD17_RS01550 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS01555 PF00158 Sigma-54 interaction domain AMD17_RS01555 PF02954 Bacterial regulatory protein, Fis family AMD17_RS01555 PF00072 Response regulator receiver domain AMD17_RS01560 PF00080 Copper/zinc superoxide dismutase (SODC) AMD17_RS01565 PF00080 Copper/zinc superoxide dismutase (SODC) AMD17_RS01570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD17_RS01580 PF00108 Thiolase, N-terminal domain AMD17_RS01580 PF02803 Thiolase, C-terminal domain AMD17_RS01615 PF00581 Rhodanese-like domain AMD17_RS01620 PF02556 Preprotein translocase subunit SecB AMD17_RS01625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD17_RS01625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD17_RS01635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD17_RS01635 PF00205 Thiamine pyrophosphate enzyme, central domain AMD17_RS01635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD17_RS01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS01645 PF00072 Response regulator receiver domain AMD17_RS01645 PF00158 Sigma-54 interaction domain AMD17_RS01645 PF02954 Bacterial regulatory protein, Fis family AMD17_RS01660 PF07690 Major Facilitator Superfamily AMD17_RS01665 PF00588 SpoU rRNA Methylase family AMD17_RS01680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD17_RS01680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD17_RS01685 PF13784 Fic/DOC family N-terminal AMD17_RS01685 PF02661 Fic/DOC family AMD17_RS01690 PF00561 alpha/beta hydrolase fold AMD17_RS01695 PF03692 Putative zinc- or iron-chelating domain AMD17_RS01700 PF00501 AMP-binding enzyme AMD17_RS01705 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD17_RS01720 PF07478 D-ala D-ala ligase C-terminus AMD17_RS01720 PF01820 D-ala D-ala ligase N-terminus AMD17_RS01730 PF03109 ABC1 family AMD17_RS01740 PF00849 RNA pseudouridylate synthase AMD17_RS01750 PF00472 RF-1 domain AMD17_RS01760 PF01112 Asparaginase AMD17_RS01765 PF01432 Peptidase family M3 AMD17_RS01770 PF12706 Beta-lactamase superfamily domain AMD17_RS01790 PF12833 Helix-turn-helix domain AMD17_RS01795 PF00999 Sodium/hydrogen exchanger family AMD17_RS01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS01800 PF03466 LysR substrate binding domain AMD17_RS01805 PF01274 Malate synthase AMD17_RS01810 PF00463 Isocitrate lyase family AMD17_RS01815 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS01835 PF00326 Prolyl oligopeptidase family AMD17_RS01840 PF18140 Propionyl-coenzyme A carboxylase BT domain AMD17_RS01840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD17_RS01840 PF00364 Biotin-requiring enzyme AMD17_RS01840 PF00289 Biotin carboxylase, N-terminal domain AMD17_RS01840 PF02785 Biotin carboxylase C-terminal domain AMD17_RS01845 PF01039 Carboxyl transferase domain AMD17_RS01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD17_RS01850 PF02770 Acyl-CoA dehydrogenase, middle domain AMD17_RS01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD17_RS01905 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD17_RS01905 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD17_RS01930 PF03969 AFG1-like ATPase AMD17_RS01935 PF01047 MarR family AMD17_RS01940 PF02566 OsmC-like protein AMD17_RS01970 PF00107 Zinc-binding dehydrogenase AMD17_RS01970 PF16884 N-terminal domain of oxidoreductase AMD17_RS01975 PF00248 Aldo/keto reductase family AMD17_RS01985 PF00849 RNA pseudouridylate synthase AMD17_RS01990 PF00593 TonB dependent receptor AMD17_RS02000 PF00271 Helicase conserved C-terminal domain AMD17_RS02000 PF04408 Helicase associated domain (HA2) AMD17_RS02000 PF00270 DEAD/DEAH box helicase AMD17_RS02000 PF08482 ATP-dependent helicase C-terminal AMD17_RS02010 PF07308 Protein of unknown function (DUF1456) AMD17_RS02015 PF00576 HIUase/Transthyretin family AMD17_RS02020 PF13454 FAD-NAD(P)-binding AMD17_RS02025 PF01014 Uricase AMD17_RS02025 PF09349 OHCU decarboxylase AMD17_RS02040 PF00266 Aminotransferase class-V AMD17_RS02045 PF01546 Peptidase family M20/M25/M40 AMD17_RS02045 PF07687 Peptidase dimerisation domain AMD17_RS02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS02050 PF03466 LysR substrate binding domain AMD17_RS02055 PF07690 Major Facilitator Superfamily AMD17_RS02070 PF01425 Amidase AMD17_RS02075 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD17_RS02085 PF00860 Permease family AMD17_RS02095 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD17_RS02100 PF00355 Rieske [2Fe-2S] domain AMD17_RS02105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS02105 PF03466 LysR substrate binding domain AMD17_RS02110 PF01026 TatD related DNase AMD17_RS02125 PF03466 LysR substrate binding domain AMD17_RS02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS02130 PF07690 Major Facilitator Superfamily AMD17_RS02145 PF02146 Sir2 family AMD17_RS02150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD17_RS02155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD17_RS02155 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD17_RS02165 PF00551 Formyl transferase AMD17_RS02170 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS02170 PF00072 Response regulator receiver domain AMD17_RS02175 PF00672 HAMP domain AMD17_RS02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS02175 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS02180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS02180 PF00529 HlyD membrane-fusion protein of T1SS AMD17_RS02185 PF00873 AcrB/AcrD/AcrF family AMD17_RS02190 PF02321 Outer membrane efflux protein AMD17_RS02200 PF02219 Methylenetetrahydrofolate reductase AMD17_RS02205 PF02677 Epoxyqueuosine reductase QueH AMD17_RS02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS02210 PF03466 LysR substrate binding domain AMD17_RS02215 PF03358 NADPH-dependent FMN reductase AMD17_RS02225 PF01717 Cobalamin-independent synthase, Catalytic domain AMD17_RS02225 PF08267 Cobalamin-independent synthase, N-terminal domain AMD17_RS02230 PF03812 2-keto-3-deoxygluconate permease AMD17_RS02240 PF05368 NmrA-like family AMD17_RS02245 PF01638 HxlR-like helix-turn-helix AMD17_RS02270 PF13276 HTH-like domain AMD17_RS02270 PF13333 Integrase core domain AMD17_RS02270 PF00665 Integrase core domain AMD17_RS02280 PF13495 Phage integrase, N-terminal SAM-like domain AMD17_RS02280 PF00589 Phage integrase family AMD17_RS02285 PF00920 Dehydratase family AMD17_RS02305 PF00132 Bacterial transferase hexapeptide (six repeats) AMD17_RS02315 PF07690 Major Facilitator Superfamily AMD17_RS02320 PF01966 HD domain AMD17_RS02320 PF11871 Domain of unknown function (DUF3391) AMD17_RS02340 PF00171 Aldehyde dehydrogenase family AMD17_RS02350 PF01494 FAD binding domain AMD17_RS02360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD17_RS02360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD17_RS02365 PF00230 Major intrinsic protein AMD17_RS02370 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMD17_RS02370 PF01266 FAD dependent oxidoreductase AMD17_RS02375 PF08220 DeoR-like helix-turn-helix domain AMD17_RS02375 PF00455 DeoR C terminal sensor domain AMD17_RS02380 PF00970 Oxidoreductase FAD-binding domain AMD17_RS02380 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD17_RS02385 PF00355 Rieske [2Fe-2S] domain AMD17_RS02390 PF01144 Coenzyme A transferase AMD17_RS02395 PF01144 Coenzyme A transferase AMD17_RS02400 PF00108 Thiolase, N-terminal domain AMD17_RS02400 PF02803 Thiolase, C-terminal domain AMD17_RS02405 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD17_RS02405 PF00775 Dioxygenase AMD17_RS02415 PF10397 Adenylosuccinate lyase C-terminus AMD17_RS02415 PF00206 Lyase AMD17_RS02420 PF12146 Serine aminopeptidase, S33 AMD17_RS02425 PF02627 Carboxymuconolactone decarboxylase family AMD17_RS02435 PF09339 IclR helix-turn-helix domain AMD17_RS02435 PF01614 Bacterial transcriptional regulator AMD17_RS02445 PF07859 alpha/beta hydrolase fold AMD17_RS02450 PF10677 Protein of unknown function (DUF2490) AMD17_RS02455 PF13932 GidA associated domain AMD17_RS02455 PF01134 Glucose inhibited division protein A AMD17_RS02465 PF00291 Pyridoxal-phosphate dependent enzyme AMD17_RS02485 PF13649 Methyltransferase domain AMD17_RS02495 PF12697 Alpha/beta hydrolase family AMD17_RS02505 PF00155 Aminotransferase class I and II AMD17_RS02510 PF04055 Radical SAM superfamily AMD17_RS02510 PF06968 Biotin and Thiamin Synthesis associated domain AMD17_RS02520 PF01040 UbiA prenyltransferase family AMD17_RS02535 PF05819 NolX protein AMD17_RS02570 PF01313 Bacterial export proteins, family 3 AMD17_RS02575 PF00813 FliP family AMD17_RS02590 PF00771 FHIPEP family AMD17_RS02595 PF01312 FlhB HrpN YscU SpaS Family AMD17_RS02610 PF01514 Secretory protein of YscJ/FliF family AMD17_RS02625 PF18269 T3SS EscN ATPase C-terminal domain AMD17_RS02625 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD17_RS02625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD17_RS02635 PF01311 Bacterial export proteins, family 1 AMD17_RS02640 PF00263 Bacterial type II and III secretion system protein AMD17_RS02640 PF03958 Bacterial type II/III secretion system short domain AMD17_RS02650 PF01464 Transglycosylase SLT domain AMD17_RS02665 PF12795 Mechanosensitive ion channel porin domain AMD17_RS02665 PF00924 Mechanosensitive ion channel AMD17_RS02665 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMD17_RS02670 PF00884 Sulfatase AMD17_RS02675 PF03109 ABC1 family AMD17_RS02680 PF05661 Protein of unknown function (DUF808) AMD17_RS02685 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS02690 PF00534 Glycosyl transferases group 1 AMD17_RS02690 PF08323 Starch synthase catalytic domain AMD17_RS02695 PF02806 Alpha amylase, C-terminal all-beta domain AMD17_RS02695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD17_RS02695 PF00128 Alpha amylase, catalytic domain AMD17_RS02700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD17_RS02700 PF00128 Alpha amylase, catalytic domain AMD17_RS02700 PF11941 Domain of unknown function (DUF3459) AMD17_RS02705 PF02446 4-alpha-glucanotransferase AMD17_RS02710 PF00128 Alpha amylase, catalytic domain AMD17_RS02720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD17_RS02720 PF00128 Alpha amylase, catalytic domain AMD17_RS02725 PF13460 NAD(P)H-binding AMD17_RS02745 PF06903 VirK protein AMD17_RS02750 PF02321 Outer membrane efflux protein AMD17_RS02765 PF00873 AcrB/AcrD/AcrF family AMD17_RS02780 PF00270 DEAD/DEAH box helicase AMD17_RS02780 PF00271 Helicase conserved C-terminal domain AMD17_RS02785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD17_RS02785 PF02817 e3 binding domain AMD17_RS02785 PF00364 Biotin-requiring enzyme AMD17_RS02795 PF02779 Transketolase, pyrimidine binding domain AMD17_RS02795 PF02780 Transketolase, C-terminal domain AMD17_RS02800 PF00676 Dehydrogenase E1 component AMD17_RS02810 PF03301 Tryptophan 2,3-dioxygenase AMD17_RS02815 PF00854 POT family AMD17_RS02825 PF01047 MarR family AMD17_RS02830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD17_RS02835 PF04209 homogentisate 1,2-dioxygenase AMD17_RS02850 PF03334 Na+/H+ antiporter subunit AMD17_RS02855 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMD17_RS02865 PF00361 Proton-conducting membrane transporter AMD17_RS02870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD17_RS02875 PF00361 Proton-conducting membrane transporter AMD17_RS02875 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMD17_RS02875 PF13244 Domain of unknown function (DUF4040) AMD17_RS02875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD17_RS02890 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD17_RS02890 PF01447 Thermolysin metallopeptidase, catalytic domain AMD17_RS02890 PF01483 Proprotein convertase P-domain AMD17_RS02890 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD17_RS02895 PF00182 Chitinase class I AMD17_RS02915 PF01259 SAICAR synthetase AMD17_RS02920 PF05099 Tellurite resistance protein TerB AMD17_RS02920 PF00226 DnaJ domain AMD17_RS02930 PF00834 Ribulose-phosphate 3 epimerase family AMD17_RS02935 PF00583 Acetyltransferase (GNAT) family AMD17_RS02940 PF00781 Diacylglycerol kinase catalytic domain AMD17_RS02945 PF04715 Anthranilate synthase component I, N terminal region AMD17_RS02945 PF00425 chorismate binding enzyme AMD17_RS02955 PF00117 Glutamine amidotransferase class-I AMD17_RS02965 PF00591 Glycosyl transferase family, a/b domain AMD17_RS02965 PF02885 Glycosyl transferase family, helical bundle domain AMD17_RS02970 PF00218 Indole-3-glycerol phosphate synthase AMD17_RS02980 PF00027 Cyclic nucleotide-binding domain AMD17_RS02980 PF00325 Bacterial regulatory proteins, crp family AMD17_RS02985 PF02675 S-adenosylmethionine decarboxylase AMD17_RS02990 PF00893 Small Multidrug Resistance protein AMD17_RS02995 PF03232 Ubiquinone biosynthesis protein COQ7 AMD17_RS03000 PF00572 Ribosomal protein L13 AMD17_RS03005 PF00380 Ribosomal protein S9/S16 AMD17_RS03020 PF00293 NUDIX domain AMD17_RS03030 PF00210 Ferritin-like domain AMD17_RS03035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD17_RS03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS03035 PF00072 Response regulator receiver domain AMD17_RS03035 PF01627 Hpt domain AMD17_RS03035 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS03035 PF00672 HAMP domain AMD17_RS03040 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS03040 PF00072 Response regulator receiver domain AMD17_RS03060 PF01521 Iron-sulphur cluster biosynthesis AMD17_RS03080 PF09297 NADH pyrophosphatase zinc ribbon domain AMD17_RS03080 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD17_RS03080 PF00293 NUDIX domain AMD17_RS03085 PF03186 CobD/Cbib protein AMD17_RS03085 PF17113 Regulatory signalling modulator protein AmpE AMD17_RS03105 PF07690 Major Facilitator Superfamily AMD17_RS03110 PF03466 LysR substrate binding domain AMD17_RS03110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS03115 PF07690 Major Facilitator Superfamily AMD17_RS03120 PF12805 FUSC-like inner membrane protein yccS AMD17_RS03130 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD17_RS03130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD17_RS03130 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD17_RS03140 PF02142 MGS-like domain AMD17_RS03140 PF01808 AICARFT/IMPCHase bienzyme AMD17_RS03145 PF01066 CDP-alcohol phosphatidyltransferase AMD17_RS03150 PF12147 Putative methyltransferase AMD17_RS03150 PF12146 Serine aminopeptidase, S33 AMD17_RS03155 PF00782 Dual specificity phosphatase, catalytic domain AMD17_RS03185 PF02954 Bacterial regulatory protein, Fis family AMD17_RS03200 PF01381 Helix-turn-helix AMD17_RS03225 PF00289 Biotin carboxylase, N-terminal domain AMD17_RS03225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD17_RS03225 PF02785 Biotin carboxylase C-terminal domain AMD17_RS03235 PF00364 Biotin-requiring enzyme AMD17_RS03240 PF01220 Dehydroquinase class II AMD17_RS03245 PF02683 Cytochrome C biogenesis protein transmembrane region AMD17_RS03245 PF11412 Disulphide bond corrector protein DsbC AMD17_RS03250 PF03091 CutA1 divalent ion tolerance protein AMD17_RS03265 PF01852 START domain AMD17_RS03275 PF00106 short chain dehydrogenase AMD17_RS03280 PF04231 Endonuclease I AMD17_RS03285 PF00166 Chaperonin 10 Kd subunit AMD17_RS03290 PF00118 TCP-1/cpn60 chaperonin family AMD17_RS03300 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS03300 PF00593 TonB dependent receptor AMD17_RS03305 PF00793 DAHP synthetase I family AMD17_RS03320 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD17_RS03330 PF08335 GlnD PII-uridylyltransferase AMD17_RS03330 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD17_RS03335 PF02592 Putative vitamin uptake transporter AMD17_RS03355 PF00881 Nitroreductase family AMD17_RS03360 PF04264 YceI-like domain AMD17_RS03385 PF16957 Malonate decarboxylase, alpha subunit, transporter AMD17_RS03390 PF06857 Malonate decarboxylase delta subunit (MdcD) AMD17_RS03395 PF01039 Carboxyl transferase domain AMD17_RS03405 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AMD17_RS03410 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD17_RS03415 PF00698 Acyl transferase domain AMD17_RS03425 PF07729 FCD domain AMD17_RS03425 PF00392 Bacterial regulatory proteins, gntR family AMD17_RS03430 PF13419 Haloacid dehalogenase-like hydrolase AMD17_RS03460 PF07745 Glycosyl hydrolase family 53 AMD17_RS03465 PF17831 Pyruvate dehydrogenase E1 component middle domain AMD17_RS03465 PF00456 Transketolase, thiamine diphosphate binding domain AMD17_RS03470 PF00665 Integrase core domain AMD17_RS03470 PF13333 Integrase core domain AMD17_RS03470 PF13276 HTH-like domain AMD17_RS03480 PF00106 short chain dehydrogenase AMD17_RS03495 PF00106 short chain dehydrogenase AMD17_RS03505 PF13409 Glutathione S-transferase, N-terminal domain AMD17_RS03530 PF12823 Domain of unknown function (DUF3817) AMD17_RS03530 PF03176 MMPL family AMD17_RS03535 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD17_RS03535 PF00326 Prolyl oligopeptidase family AMD17_RS03540 PF07759 Protein of unknown function (DUF1615) AMD17_RS03550 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS03575 PF00892 EamA-like transporter family AMD17_RS03580 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD17_RS03590 PF00324 Amino acid permease AMD17_RS03600 PF01544 CorA-like Mg2+ transporter protein AMD17_RS03610 PF01204 Trehalase AMD17_RS03620 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD17_RS03620 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD17_RS03645 PF00563 EAL domain AMD17_RS03645 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS03645 PF08448 PAS fold AMD17_RS03645 PF08447 PAS fold AMD17_RS03650 PF00672 HAMP domain AMD17_RS03650 PF02203 Tar ligand binding domain homologue AMD17_RS03650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS03655 PF00150 Cellulase (glycosyl hydrolase family 5) AMD17_RS03655 PF00553 Cellulose binding domain AMD17_RS03660 PF00916 Sulfate permease family AMD17_RS03660 PF01740 STAS domain AMD17_RS03665 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS03680 PF13632 Glycosyl transferase family group 2 AMD17_RS03690 PF06580 Histidine kinase AMD17_RS03690 PF07694 5TMR of 5TMR-LYT AMD17_RS03695 PF04397 LytTr DNA-binding domain AMD17_RS03695 PF00072 Response regulator receiver domain AMD17_RS03700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD17_RS03700 PF03900 Porphobilinogen deaminase, C-terminal domain AMD17_RS03725 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD17_RS03725 PF00326 Prolyl oligopeptidase family AMD17_RS03735 PF00155 Aminotransferase class I and II AMD17_RS03740 PF00326 Prolyl oligopeptidase family AMD17_RS03740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD17_RS03745 PF04304 Protein of unknown function (DUF454) AMD17_RS03755 PF01678 Diaminopimelate epimerase AMD17_RS03765 PF00589 Phage integrase family AMD17_RS03765 PF02899 Phage integrase, N-terminal SAM-like domain AMD17_RS03770 PF00227 Proteasome subunit AMD17_RS03775 PF00004 ATPase family associated with various cellular activities (AAA) AMD17_RS03775 PF07724 AAA domain (Cdc48 subfamily) AMD17_RS03775 PF10431 C-terminal, D2-small domain, of ClpB protein AMD17_RS03785 PF13673 Acetyltransferase (GNAT) domain AMD17_RS03790 PF13533 Biotin-lipoyl like AMD17_RS03800 PF01209 ubiE/COQ5 methyltransferase family AMD17_RS03805 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS03805 PF03707 Bacterial signalling protein N terminal repeat AMD17_RS03805 PF00563 EAL domain AMD17_RS03810 PF01433 Peptidase family M1 domain AMD17_RS03810 PF11838 ERAP1-like C-terminal domain AMD17_RS03830 PF13360 PQQ-like domain AMD17_RS03835 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD17_RS03850 PF00107 Zinc-binding dehydrogenase AMD17_RS03850 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS03860 PF01590 GAF domain AMD17_RS03860 PF02954 Bacterial regulatory protein, Fis family AMD17_RS03860 PF00158 Sigma-54 interaction domain AMD17_RS03865 PF00294 pfkB family carbohydrate kinase AMD17_RS03875 PF04085 rod shape-determining protein MreC AMD17_RS03885 PF03717 Penicillin-binding Protein dimerisation domain AMD17_RS03885 PF00905 Penicillin binding protein transpeptidase domain AMD17_RS03890 PF01098 Cell cycle protein AMD17_RS03895 PF00295 Glycosyl hydrolases family 28 AMD17_RS03900 PF13406 Transglycosylase SLT domain AMD17_RS03905 PF03330 Lytic transglycolase AMD17_RS03905 PF05036 Sporulation related domain AMD17_RS03915 PF07943 Penicillin-binding protein 5, C-terminal domain AMD17_RS03915 PF00768 D-alanyl-D-alanine carboxypeptidase AMD17_RS03925 PF04359 Protein of unknown function (DUF493) AMD17_RS03930 PF03099 Biotin/lipoate A/B protein ligase family AMD17_RS03935 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMD17_RS03935 PF04055 Radical SAM superfamily AMD17_RS03940 PF11818 C-terminal domain of tail specific protease (DUF3340) AMD17_RS03940 PF00595 PDZ domain AMD17_RS03940 PF17804 Tail specific protease N-terminal domain AMD17_RS03940 PF03572 Peptidase family S41 AMD17_RS03950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS03950 PF03466 LysR substrate binding domain AMD17_RS03960 PF00293 NUDIX domain AMD17_RS03960 PF01467 Cytidylyltransferase-like AMD17_RS03995 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD17_RS03995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD17_RS04000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD17_RS04000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD17_RS04005 PF04972 BON domain AMD17_RS04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS04010 PF01590 GAF domain AMD17_RS04010 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS04010 PF08446 PAS fold AMD17_RS04010 PF00360 Phytochrome region AMD17_RS04015 PF00072 Response regulator receiver domain AMD17_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS04020 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS04025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD17_RS04070 PF03958 Bacterial type II/III secretion system short domain AMD17_RS04070 PF00263 Bacterial type II and III secretion system protein AMD17_RS04075 PF00437 Type II/IV secretion system protein AMD17_RS04080 PF00482 Type II secretion system (T2SS), protein F AMD17_RS04085 PF08334 Type II secretion system (T2SS), protein G AMD17_RS04085 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS04090 PF12019 Type II transport protein GspH AMD17_RS04090 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS04095 PF02501 Type II secretion system (T2SS), protein I AMD17_RS04095 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS04100 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS04100 PF11612 Type II secretion system (T2SS), protein J AMD17_RS04105 PF03934 Type II secretion system (T2SS), protein K AMD17_RS04145 PF00392 Bacterial regulatory proteins, gntR family AMD17_RS04145 PF07702 UTRA domain AMD17_RS04150 PF07690 Major Facilitator Superfamily AMD17_RS04155 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS04160 PF01380 SIS domain AMD17_RS04165 PF01979 Amidohydrolase family AMD17_RS04175 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD17_RS04175 PF01966 HD domain AMD17_RS04175 PF01743 Poly A polymerase head domain AMD17_RS04180 PF00732 GMC oxidoreductase AMD17_RS04180 PF05199 GMC oxidoreductase AMD17_RS04185 PF00171 Aldehyde dehydrogenase family AMD17_RS04190 PF02028 BCCT, betaine/carnitine/choline family transporter AMD17_RS04200 PF01323 DSBA-like thioredoxin domain AMD17_RS04210 PF00034 Cytochrome c AMD17_RS04215 PF01926 50S ribosome-binding GTPase AMD17_RS04220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMD17_RS04220 PF10996 Beta-Casp domain AMD17_RS04220 PF00753 Metallo-beta-lactamase superfamily AMD17_RS04230 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD17_RS04235 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS04235 PF00672 HAMP domain AMD17_RS04240 PF00072 Response regulator receiver domain AMD17_RS04240 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS04255 PF02583 Metal-sensitive transcriptional repressor AMD17_RS04260 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS04260 PF00107 Zinc-binding dehydrogenase AMD17_RS04265 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD17_RS04270 PF00756 Putative esterase AMD17_RS04280 PF00155 Aminotransferase class I and II AMD17_RS04280 PF00392 Bacterial regulatory proteins, gntR family AMD17_RS04285 PF02567 Phenazine biosynthesis-like protein AMD17_RS04290 PF00892 EamA-like transporter family AMD17_RS04300 PF12848 ABC transporter AMD17_RS04300 PF00005 ABC transporter AMD17_RS04310 PF00464 Serine hydroxymethyltransferase AMD17_RS04315 PF03477 ATP cone domain AMD17_RS04325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD17_RS04325 PF01872 RibD C-terminal domain AMD17_RS04335 PF00677 Lumazine binding domain AMD17_RS04340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD17_RS04340 PF00925 GTP cyclohydrolase II AMD17_RS04345 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD17_RS04350 PF01029 NusB family AMD17_RS04355 PF02769 AIR synthase related protein, C-terminal domain AMD17_RS04355 PF00586 AIR synthase related protein, N-terminal domain AMD17_RS04375 PF03814 Potassium-transporting ATPase A subunit AMD17_RS04385 PF02669 K+-transporting ATPase, c chain AMD17_RS04390 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD17_RS04390 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS04390 PF13492 GAF domain AMD17_RS04390 PF13493 Domain of unknown function (DUF4118) AMD17_RS04395 PF00072 Response regulator receiver domain AMD17_RS04395 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS04410 PF01565 FAD binding domain AMD17_RS04410 PF02913 FAD linked oxidases, C-terminal domain AMD17_RS04415 PF04307 LexA-binding, inner membrane-associated putative hydrolase AMD17_RS04420 PF02021 Uncharacterised protein family UPF0102 AMD17_RS04430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD17_RS04445 PF02381 MraZ protein, putative antitoxin-like AMD17_RS04450 PF01795 MraW methylase family AMD17_RS04455 PF04999 Cell division protein FtsL AMD17_RS04460 PF03717 Penicillin-binding Protein dimerisation domain AMD17_RS04460 PF00905 Penicillin binding protein transpeptidase domain AMD17_RS04465 PF08245 Mur ligase middle domain AMD17_RS04465 PF02875 Mur ligase family, glutamate ligase domain AMD17_RS04465 PF01225 Mur ligase family, catalytic domain AMD17_RS04470 PF01225 Mur ligase family, catalytic domain AMD17_RS04470 PF02875 Mur ligase family, glutamate ligase domain AMD17_RS04470 PF08245 Mur ligase middle domain AMD17_RS04475 PF00953 Glycosyl transferase family 4 AMD17_RS04480 PF01098 Cell cycle protein AMD17_RS04485 PF03033 Glycosyltransferase family 28 N-terminal domain AMD17_RS04485 PF04101 Glycosyltransferase family 28 C-terminal domain AMD17_RS04490 PF01225 Mur ligase family, catalytic domain AMD17_RS04490 PF08245 Mur ligase middle domain AMD17_RS04490 PF02875 Mur ligase family, glutamate ligase domain AMD17_RS04495 PF07478 D-ala D-ala ligase C-terminus AMD17_RS04495 PF01820 D-ala D-ala ligase N-terminus AMD17_RS04500 PF03799 Cell division protein FtsQ AMD17_RS04500 PF08478 POTRA domain, FtsQ-type AMD17_RS04505 PF02491 SHS2 domain inserted in FTSA AMD17_RS04510 PF12327 FtsZ family, C-terminal domain AMD17_RS04510 PF00091 Tubulin/FtsZ family, GTPase domain AMD17_RS04515 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD17_RS04525 PF08525 Opacity-associated protein A N-terminal motif AMD17_RS04525 PF01476 LysM domain AMD17_RS04525 PF01551 Peptidase family M23 AMD17_RS04530 PF02810 SEC-C motif AMD17_RS04530 PF07517 SecA DEAD-like domain AMD17_RS04530 PF07516 SecA Wing and Scaffold domain AMD17_RS04530 PF01043 SecA preprotein cross-linking domain AMD17_RS04535 PF00293 NUDIX domain AMD17_RS04545 PF02219 Methylenetetrahydrofolate reductase AMD17_RS04555 PF14765 Polyketide synthase dehydratase AMD17_RS04555 PF00550 Phosphopantetheine attachment site AMD17_RS04555 PF08659 KR domain AMD17_RS04555 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD17_RS04555 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD17_RS04555 PF00107 Zinc-binding dehydrogenase AMD17_RS04555 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS04555 PF16197 Ketoacyl-synthetase C-terminal extension AMD17_RS04555 PF00698 Acyl transferase domain AMD17_RS04560 PF00082 Subtilase family AMD17_RS04560 PF09286 Pro-kumamolisin, activation domain AMD17_RS04570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD17_RS04575 PF00128 Alpha amylase, catalytic domain AMD17_RS04605 PF13649 Methyltransferase domain AMD17_RS04610 PF05221 S-adenosyl-L-homocysteine hydrolase AMD17_RS04610 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD17_RS04620 PF00311 Phosphoenolpyruvate carboxylase AMD17_RS04650 PF00328 Histidine phosphatase superfamily (branch 2) AMD17_RS04655 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD17_RS04655 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD17_RS04655 PF02772 S-adenosylmethionine synthetase, central domain AMD17_RS04665 PF13649 Methyltransferase domain AMD17_RS04670 PF01207 Dihydrouridine synthase (Dus) AMD17_RS04680 PF00294 pfkB family carbohydrate kinase AMD17_RS04685 PF01773 Na+ dependent nucleoside transporter N-terminus AMD17_RS04685 PF07662 Na+ dependent nucleoside transporter C-terminus AMD17_RS04685 PF07670 Nucleoside recognition AMD17_RS04690 PF00248 Aldo/keto reductase family AMD17_RS04700 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS04700 PF00593 TonB dependent receptor AMD17_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS04725 PF00005 ABC transporter AMD17_RS04735 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD17_RS04745 PF00005 ABC transporter AMD17_RS04750 PF13472 GDSL-like Lipase/Acylhydrolase family AMD17_RS04755 PF00072 Response regulator receiver domain AMD17_RS04755 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS04760 PF08521 Two-component sensor kinase N-terminal AMD17_RS04760 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS04770 PF01219 Prokaryotic diacylglycerol kinase AMD17_RS04790 PF01790 Prolipoprotein diacylglyceryl transferase AMD17_RS04795 PF00303 Thymidylate synthase AMD17_RS04805 PF00186 Dihydrofolate reductase AMD17_RS04810 PF00158 Sigma-54 interaction domain AMD17_RS04815 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD17_RS04815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD17_RS04820 PF00005 ABC transporter AMD17_RS04825 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS04835 PF00296 Luciferase-like monooxygenase AMD17_RS04840 PF03358 NADPH-dependent FMN reductase AMD17_RS04860 PF00296 Luciferase-like monooxygenase AMD17_RS04865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD17_RS04870 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS04875 PF12911 N-terminal TM domain of oligopeptide transport permease C AMD17_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS04880 PF00005 ABC transporter AMD17_RS04880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD17_RS04885 PF00149 Calcineurin-like phosphoesterase AMD17_RS04890 PF04379 ApaG domain AMD17_RS04895 PF00398 Ribosomal RNA adenine dimethylase AMD17_RS04900 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD17_RS04905 PF09312 SurA N-terminal domain AMD17_RS04905 PF00639 PPIC-type PPIASE domain AMD17_RS04910 PF04453 LPS transport system D AMD17_RS04910 PF03968 OstA-like protein AMD17_RS04920 PF00850 Histone deacetylase domain AMD17_RS04925 PF01923 Cobalamin adenosyltransferase AMD17_RS04935 PF01494 FAD binding domain AMD17_RS04940 PF01494 FAD binding domain AMD17_RS04960 PF07729 FCD domain AMD17_RS04960 PF00392 Bacterial regulatory proteins, gntR family AMD17_RS04965 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD17_RS04970 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD17_RS04970 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD17_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS04975 PF03466 LysR substrate binding domain AMD17_RS04980 PF00501 AMP-binding enzyme AMD17_RS04980 PF13193 AMP-binding enzyme C-terminal domain AMD17_RS04985 PF00171 Aldehyde dehydrogenase family AMD17_RS04990 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS05010 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD17_RS05015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD17_RS05015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD17_RS05020 PF01728 FtsJ-like methyltransferase AMD17_RS05020 PF18125 RlmM ferredoxin-like domain AMD17_RS05045 PF00892 EamA-like transporter family AMD17_RS05055 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD17_RS05055 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD17_RS05070 PF00072 Response regulator receiver domain AMD17_RS05070 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS05075 PF01627 Hpt domain AMD17_RS05075 PF00072 Response regulator receiver domain AMD17_RS05075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD17_RS05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS05075 PF00672 HAMP domain AMD17_RS05075 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS05080 PF00072 Response regulator receiver domain AMD17_RS05080 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS05090 PF01625 Peptide methionine sulfoxide reductase AMD17_RS05100 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMD17_RS05105 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD17_RS05105 PF14760 Rnk N-terminus AMD17_RS05110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS05110 PF03466 LysR substrate binding domain AMD17_RS05115 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS05115 PF13192 Thioredoxin domain AMD17_RS05120 PF00578 AhpC/TSA family AMD17_RS05120 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD17_RS05125 PF17827 PrmC N-terminal domain AMD17_RS05125 PF05175 Methyltransferase small domain AMD17_RS05130 PF00561 alpha/beta hydrolase fold AMD17_RS05140 PF00293 NUDIX domain AMD17_RS05145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD17_RS05145 PF01612 3'-5' exonuclease AMD17_RS05145 PF00476 DNA polymerase family A AMD17_RS05145 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD17_RS05175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD17_RS05175 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD17_RS05175 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD17_RS05200 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD17_RS05205 PF02233 NAD(P) transhydrogenase beta subunit AMD17_RS05220 PF01063 Amino-transferase class IV AMD17_RS05225 PF00082 Subtilase family AMD17_RS05225 PF04151 Bacterial pre-peptidase C-terminal domain AMD17_RS05230 PF00082 Subtilase family AMD17_RS05230 PF04151 Bacterial pre-peptidase C-terminal domain AMD17_RS05235 PF04151 Bacterial pre-peptidase C-terminal domain AMD17_RS05235 PF00082 Subtilase family AMD17_RS05240 PF04073 Aminoacyl-tRNA editing domain AMD17_RS05260 PF03358 NADPH-dependent FMN reductase AMD17_RS05265 PF03631 Virulence factor BrkB AMD17_RS05270 PF08534 Redoxin AMD17_RS05275 PF00708 Acylphosphatase AMD17_RS05285 PF03976 Polyphosphate kinase 2 (PPK2) AMD17_RS05290 PF00994 Probable molybdopterin binding domain AMD17_RS05300 PF00472 RF-1 domain AMD17_RS05300 PF03462 PCRF domain AMD17_RS05305 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD17_RS05305 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD17_RS05305 PF01488 Shikimate / quinate 5-dehydrogenase AMD17_RS05315 PF03550 Outer membrane lipoprotein LolB AMD17_RS05320 PF00288 GHMP kinases N terminal domain AMD17_RS05320 PF08544 GHMP kinases C terminal AMD17_RS05330 PF14572 Phosphoribosyl synthetase-associated domain AMD17_RS05330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD17_RS05335 PF14693 Ribosomal protein TL5, C-terminal domain AMD17_RS05335 PF01386 Ribosomal L25p family AMD17_RS05340 PF01195 Peptidyl-tRNA hydrolase AMD17_RS05345 PF01926 50S ribosome-binding GTPase AMD17_RS05345 PF06071 Protein of unknown function (DUF933) AMD17_RS05375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD17_RS05380 PF02357 Transcription termination factor nusG AMD17_RS05380 PF00467 KOW motif AMD17_RS05385 PF00298 Ribosomal protein L11, RNA binding domain AMD17_RS05385 PF03946 Ribosomal protein L11, N-terminal domain AMD17_RS05390 PF00687 Ribosomal protein L1p/L10e family AMD17_RS05395 PF00466 Ribosomal protein L10 AMD17_RS05400 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD17_RS05400 PF16320 Ribosomal protein L7/L12 dimerisation domain AMD17_RS05405 PF04565 RNA polymerase Rpb2, domain 3 AMD17_RS05405 PF10385 RNA polymerase beta subunit external 1 domain AMD17_RS05405 PF00562 RNA polymerase Rpb2, domain 6 AMD17_RS05405 PF04560 RNA polymerase Rpb2, domain 7 AMD17_RS05405 PF04561 RNA polymerase Rpb2, domain 2 AMD17_RS05405 PF04563 RNA polymerase beta subunit AMD17_RS05410 PF04998 RNA polymerase Rpb1, domain 5 AMD17_RS05410 PF05000 RNA polymerase Rpb1, domain 4 AMD17_RS05410 PF04997 RNA polymerase Rpb1, domain 1 AMD17_RS05410 PF00623 RNA polymerase Rpb1, domain 2 AMD17_RS05410 PF04983 RNA polymerase Rpb1, domain 3 AMD17_RS05415 PF00164 Ribosomal protein S12/S23 AMD17_RS05420 PF00177 Ribosomal protein S7p/S5e AMD17_RS05425 PF03144 Elongation factor Tu domain 2 AMD17_RS05425 PF00009 Elongation factor Tu GTP binding domain AMD17_RS05425 PF03764 Elongation factor G, domain IV AMD17_RS05425 PF14492 Elongation Factor G, domain II AMD17_RS05425 PF00679 Elongation factor G C-terminus AMD17_RS05430 PF03143 Elongation factor Tu C-terminal domain AMD17_RS05430 PF03144 Elongation factor Tu domain 2 AMD17_RS05430 PF00009 Elongation factor Tu GTP binding domain AMD17_RS05435 PF00338 Ribosomal protein S10p/S20e AMD17_RS05440 PF00297 Ribosomal protein L3 AMD17_RS05445 PF00573 Ribosomal protein L4/L1 family AMD17_RS05450 PF00276 Ribosomal protein L23 AMD17_RS05455 PF00181 Ribosomal Proteins L2, RNA binding domain AMD17_RS05455 PF03947 Ribosomal Proteins L2, C-terminal domain AMD17_RS05460 PF00203 Ribosomal protein S19 AMD17_RS05465 PF00237 Ribosomal protein L22p/L17e AMD17_RS05470 PF07650 KH domain AMD17_RS05470 PF00189 Ribosomal protein S3, C-terminal domain AMD17_RS05475 PF00252 Ribosomal protein L16p/L10e AMD17_RS05480 PF00831 Ribosomal L29 protein AMD17_RS05485 PF00366 Ribosomal protein S17 AMD17_RS05490 PF00238 Ribosomal protein L14p/L23e AMD17_RS05495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMD17_RS05495 PF00467 KOW motif AMD17_RS05500 PF00281 Ribosomal protein L5 AMD17_RS05500 PF00673 ribosomal L5P family C-terminus AMD17_RS05505 PF00253 Ribosomal protein S14p/S29e AMD17_RS05510 PF00410 Ribosomal protein S8 AMD17_RS05515 PF00347 Ribosomal protein L6 AMD17_RS05520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMD17_RS05525 PF00333 Ribosomal protein S5, N-terminal domain AMD17_RS05525 PF03719 Ribosomal protein S5, C-terminal domain AMD17_RS05530 PF00327 Ribosomal protein L30p/L7e AMD17_RS05535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMD17_RS05540 PF00344 SecY translocase AMD17_RS05545 PF00416 Ribosomal protein S13/S18 AMD17_RS05550 PF00411 Ribosomal protein S11 AMD17_RS05555 PF01479 S4 domain AMD17_RS05555 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD17_RS05560 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD17_RS05560 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD17_RS05560 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD17_RS05565 PF01196 Ribosomal protein L17 AMD17_RS05570 PF02600 Disulfide bond formation protein DsbB AMD17_RS05585 PF01474 Class-II DAHP synthetase family AMD17_RS05595 PF01425 Amidase AMD17_RS05605 PF00009 Elongation factor Tu GTP binding domain AMD17_RS05605 PF03144 Elongation factor Tu domain 2 AMD17_RS05605 PF00679 Elongation factor G C-terminus AMD17_RS05610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD17_RS05615 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD17_RS05615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD17_RS05620 PF02798 Glutathione S-transferase, N-terminal domain AMD17_RS05620 PF00043 Glutathione S-transferase, C-terminal domain AMD17_RS05630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS05630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD17_RS05635 PF00107 Zinc-binding dehydrogenase AMD17_RS05635 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS05640 PF05736 OprF membrane domain AMD17_RS05640 PF00691 OmpA family AMD17_RS05650 PF00849 RNA pseudouridylate synthase AMD17_RS05660 PF00155 Aminotransferase class I and II AMD17_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS05680 PF00005 ABC transporter AMD17_RS05680 PF12857 TOBE-like domain AMD17_RS05680 PF17850 CysA C-terminal regulatory domain AMD17_RS05690 PF00107 Zinc-binding dehydrogenase AMD17_RS05690 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS05705 PF04185 Phosphoesterase family AMD17_RS05705 PF05506 Domain of unknown function (DUF756) AMD17_RS05710 PF10459 Peptidase S46 AMD17_RS05715 PF10459 Peptidase S46 AMD17_RS05720 PF00300 Histidine phosphatase superfamily (branch 1) AMD17_RS05725 PF08245 Mur ligase middle domain AMD17_RS05725 PF02875 Mur ligase family, glutamate ligase domain AMD17_RS05740 PF00156 Phosphoribosyl transferase domain AMD17_RS05745 PF04305 Protein of unknown function (DUF455) AMD17_RS05765 PF00149 Calcineurin-like phosphoesterase AMD17_RS05770 PF01569 PAP2 superfamily AMD17_RS05775 PF00534 Glycosyl transferases group 1 AMD17_RS05775 PF13439 Glycosyltransferase Family 4 AMD17_RS05780 PF02541 Ppx/GppA phosphatase family AMD17_RS05785 PF13090 Polyphosphate kinase C-terminal domain 2 AMD17_RS05785 PF02503 Polyphosphate kinase middle domain AMD17_RS05785 PF17941 Polyphosphate kinase C-terminal domain 1 AMD17_RS05785 PF13089 Polyphosphate kinase N-terminal domain AMD17_RS05790 PF11808 Phosphate regulon sensor protein PhoR AMD17_RS05790 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS05790 PF00989 PAS fold AMD17_RS05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS05795 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS05795 PF00072 Response regulator receiver domain AMD17_RS05800 PF01435 Peptidase family M48 AMD17_RS05800 PF13181 Tetratricopeptide repeat AMD17_RS05805 PF00462 Glutaredoxin AMD17_RS05815 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD17_RS05945 PF13333 Integrase core domain AMD17_RS05945 PF13276 HTH-like domain AMD17_RS05945 PF00665 Integrase core domain AMD17_RS05960 PF00989 PAS fold AMD17_RS05960 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS05970 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD17_RS05970 PF05697 Bacterial trigger factor protein (TF) AMD17_RS05975 PF00574 Clp protease AMD17_RS05980 PF07724 AAA domain (Cdc48 subfamily) AMD17_RS05980 PF10431 C-terminal, D2-small domain, of ClpB protein AMD17_RS05980 PF06689 ClpX C4-type zinc finger AMD17_RS05985 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMD17_RS05985 PF00004 ATPase family associated with various cellular activities (AAA) AMD17_RS05985 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD17_RS05990 PF00216 Bacterial DNA-binding protein AMD17_RS06015 PF01476 LysM domain AMD17_RS06015 PF05257 CHAP domain AMD17_RS06020 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD17_RS06020 PF00753 Metallo-beta-lactamase superfamily AMD17_RS06030 PF00075 RNase H AMD17_RS06035 PF00929 Exonuclease AMD17_RS06055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD17_RS06065 PF00753 Metallo-beta-lactamase superfamily AMD17_RS06065 PF12706 Beta-lactamase superfamily domain AMD17_RS06070 PF06463 Molybdenum Cofactor Synthesis C AMD17_RS06070 PF04055 Radical SAM superfamily AMD17_RS06080 PF01967 MoaC family AMD17_RS06085 PF02597 ThiS family AMD17_RS06090 PF02391 MoaE protein AMD17_RS06140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMD17_RS06140 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD17_RS06140 PF12169 DNA polymerase III subunits gamma and tau domain III AMD17_RS06145 PF02575 YbaB/EbfC DNA-binding family AMD17_RS06150 PF13662 Toprim domain AMD17_RS06150 PF02132 RecR protein AMD17_RS06155 PF01230 HIT domain AMD17_RS06165 PF13559 Domain of unknown function (DUF4129) AMD17_RS06165 PF11992 Domain of unknown function (DUF3488) AMD17_RS06165 PF01841 Transglutaminase-like superfamily AMD17_RS06175 PF17863 AAA lid domain AMD17_RS06175 PF07726 ATPase family associated with various cellular activities (AAA) AMD17_RS06195 PF02545 Maf-like protein AMD17_RS06200 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMD17_RS06205 PF01783 Ribosomal L32p protein family AMD17_RS06210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD17_RS06210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD17_RS06220 PF00698 Acyl transferase domain AMD17_RS06230 PF00550 Phosphopantetheine attachment site AMD17_RS06235 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD17_RS06235 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD17_RS06240 PF04715 Anthranilate synthase component I, N terminal region AMD17_RS06240 PF00425 chorismate binding enzyme AMD17_RS06245 PF02618 YceG-like family AMD17_RS06250 PF09115 DNA polymerase III, delta subunit, C terminal AMD17_RS06270 PF00158 Sigma-54 interaction domain AMD17_RS06270 PF06506 Propionate catabolism activator AMD17_RS06270 PF02954 Bacterial regulatory protein, Fis family AMD17_RS06280 PF00285 Citrate synthase, C-terminal domain AMD17_RS06285 PF00694 Aconitase C-terminal domain AMD17_RS06285 PF00330 Aconitase family (aconitate hydratase) AMD17_RS06290 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AMD17_RS06295 PF04303 PrpF protein AMD17_RS06300 PF00593 TonB dependent receptor AMD17_RS06300 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS06310 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AMD17_RS06310 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AMD17_RS06310 PF07703 Alpha-2-macroglobulin bait region domain AMD17_RS06310 PF01835 MG2 domain AMD17_RS06310 PF17962 Bacterial macroglobulin domain 6 AMD17_RS06310 PF00207 Alpha-2-macroglobulin family AMD17_RS06310 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AMD17_RS06310 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AMD17_RS06325 PF00905 Penicillin binding protein transpeptidase domain AMD17_RS06325 PF06832 Penicillin-Binding Protein C-terminus Family AMD17_RS06325 PF00912 Transglycosylase AMD17_RS06335 PF08534 Redoxin AMD17_RS06345 PF00226 DnaJ domain AMD17_RS06345 PF01556 DnaJ C terminal domain AMD17_RS06350 PF00072 Response regulator receiver domain AMD17_RS06355 PF12221 Bacterial membrane protein N terminal AMD17_RS06355 PF01145 SPFH domain / Band 7 family AMD17_RS06360 PF01145 SPFH domain / Band 7 family AMD17_RS06370 PF00709 Adenylosuccinate synthetase AMD17_RS06375 PF01433 Peptidase family M1 domain AMD17_RS06375 PF11838 ERAP1-like C-terminal domain AMD17_RS06390 PF00440 Bacterial regulatory proteins, tetR family AMD17_RS06460 PF00300 Histidine phosphatase superfamily (branch 1) AMD17_RS06460 PF13456 Reverse transcriptase-like AMD17_RS06465 PF01256 Carbohydrate kinase AMD17_RS06475 PF00723 Glycosyl hydrolases family 15 AMD17_RS06485 PF07971 Glycosyl hydrolase family 92 AMD17_RS06485 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD17_RS06505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS06525 PF17755 UvrA DNA-binding domain AMD17_RS06530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD17_RS06530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD17_RS06535 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD17_RS06535 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD17_RS06540 PF01799 [2Fe-2S] binding domain AMD17_RS06540 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD17_RS06575 PF00717 Peptidase S24-like AMD17_RS06575 PF01726 LexA DNA binding domain AMD17_RS06590 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD17_RS06590 PF02811 PHP domain AMD17_RS06590 PF14579 Helix-hairpin-helix motif AMD17_RS06590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD17_RS06595 PF00326 Prolyl oligopeptidase family AMD17_RS06605 PF03169 OPT oligopeptide transporter protein AMD17_RS06620 PF00326 Prolyl oligopeptidase family AMD17_RS06620 PF07676 WD40-like Beta Propeller Repeat AMD17_RS06620 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD17_RS06635 PF02311 AraC-like ligand binding domain AMD17_RS06635 PF12833 Helix-turn-helix domain AMD17_RS06650 PF18011 C-terminal domain found in long catalases AMD17_RS06650 PF06628 Catalase-related immune-responsive AMD17_RS06650 PF00199 Catalase AMD17_RS06655 PF00248 Aldo/keto reductase family AMD17_RS06660 PF00135 Carboxylesterase family AMD17_RS06665 PF02347 Glycine cleavage system P-protein AMD17_RS06670 PF07690 Major Facilitator Superfamily AMD17_RS06685 PF08019 Phosphoethanolamine transferase EptA/EptB AMD17_RS06685 PF00884 Sulfatase AMD17_RS06700 PF00072 Response regulator receiver domain AMD17_RS06700 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS06705 PF08521 Two-component sensor kinase N-terminal AMD17_RS06705 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS06715 PF03776 Septum formation topological specificity factor MinE AMD17_RS06720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD17_RS06725 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD17_RS06725 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD17_RS06740 PF07730 Histidine kinase AMD17_RS06745 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS06745 PF00072 Response regulator receiver domain AMD17_RS06760 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD17_RS06785 PF02222 ATP-grasp domain AMD17_RS06795 PF04377 Arginine-tRNA-protein transferase, C terminus AMD17_RS06795 PF04376 Arginine-tRNA-protein transferase, N terminus AMD17_RS06820 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS06835 PF17755 UvrA DNA-binding domain AMD17_RS06835 PF17760 UvrA interaction domain AMD17_RS06835 PF00005 ABC transporter AMD17_RS06840 PF00829 Ribosomal prokaryotic L21 protein AMD17_RS06845 PF01016 Ribosomal L27 protein AMD17_RS06850 PF01926 50S ribosome-binding GTPase AMD17_RS06850 PF01018 GTP1/OBG AMD17_RS06855 PF01649 Ribosomal protein S20 AMD17_RS06860 PF03023 Lipid II flippase MurJ AMD17_RS06865 PF01687 Riboflavin kinase AMD17_RS06865 PF06574 FAD synthetase AMD17_RS06870 PF08264 Anticodon-binding domain of tRNA AMD17_RS06870 PF00133 tRNA synthetases class I (I, L, M and V) AMD17_RS06870 PF06827 Zinc finger found in FPG and IleRS AMD17_RS06875 PF01252 Signal peptidase (SPase) II AMD17_RS06880 PF02401 LytB protein AMD17_RS06890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD17_RS06890 PF06481 COX Aromatic Rich Motif AMD17_RS06895 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD17_RS06900 PF00510 Cytochrome c oxidase subunit III AMD17_RS06905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMD17_RS06915 PF18073 Rubredoxin metal binding domain AMD17_RS06920 PF05656 Protein of unknown function (DUF805) AMD17_RS06930 PF12833 Helix-turn-helix domain AMD17_RS06935 PF00183 Hsp90 protein AMD17_RS06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS06945 PF01740 STAS domain AMD17_RS06945 PF08678 Rsbr N terminal AMD17_RS06950 PF01740 STAS domain AMD17_RS06955 PF13581 Histidine kinase-like ATPase domain AMD17_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS06965 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS06965 PF00072 Response regulator receiver domain AMD17_RS06965 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD17_RS06965 PF00672 HAMP domain AMD17_RS06965 PF01627 Hpt domain AMD17_RS06970 PF08448 PAS fold AMD17_RS06970 PF00072 Response regulator receiver domain AMD17_RS06970 PF13188 PAS domain AMD17_RS06970 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS06975 PF04616 Glycosyl hydrolases family 43 AMD17_RS06975 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD17_RS06980 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS06980 PF00593 TonB dependent receptor AMD17_RS06985 PF00085 Thioredoxin AMD17_RS06990 PF07237 Protein of unknown function (DUF1428) AMD17_RS06995 PF13492 GAF domain AMD17_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS06995 PF13493 Domain of unknown function (DUF4118) AMD17_RS06995 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS06995 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD17_RS07000 PF01339 CheB methylesterase AMD17_RS07005 PF01739 CheR methyltransferase, SAM binding domain AMD17_RS07005 PF03705 CheR methyltransferase, all-alpha domain AMD17_RS07010 PF00672 HAMP domain AMD17_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS07010 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS07010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD17_RS07010 PF00072 Response regulator receiver domain AMD17_RS07010 PF01627 Hpt domain AMD17_RS07015 PF00072 Response regulator receiver domain AMD17_RS07015 PF13426 PAS domain AMD17_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS07020 PF00072 Response regulator receiver domain AMD17_RS07025 PF00722 Glycosyl hydrolases family 16 AMD17_RS07030 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMD17_RS07040 PF01263 Aldose 1-epimerase AMD17_RS07045 PF01578 Cytochrome C assembly protein AMD17_RS07050 PF02978 Signal peptide binding domain AMD17_RS07050 PF00448 SRP54-type protein, GTPase domain AMD17_RS07050 PF02881 SRP54-type protein, helical bundle domain AMD17_RS07055 PF03060 Nitronate monooxygenase AMD17_RS07060 PF01063 Amino-transferase class IV AMD17_RS07065 PF00886 Ribosomal protein S16 AMD17_RS07070 PF01782 RimM N-terminal domain AMD17_RS07070 PF05239 PRC-barrel domain AMD17_RS07075 PF01746 tRNA (Guanine-1)-methyltransferase AMD17_RS07080 PF01245 Ribosomal protein L19 AMD17_RS07105 PF01479 S4 domain AMD17_RS07110 PF00141 Peroxidase AMD17_RS07120 PF01624 MutS domain I AMD17_RS07120 PF05188 MutS domain II AMD17_RS07120 PF05190 MutS family domain IV AMD17_RS07120 PF00488 MutS domain V AMD17_RS07120 PF05192 MutS domain III AMD17_RS07130 PF03527 RHS protein AMD17_RS07130 PF05593 RHS Repeat AMD17_RS07150 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD17_RS07150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD17_RS07150 PF00703 Glycosyl hydrolases family 2 AMD17_RS07150 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD17_RS07150 PF16355 Domain of unknown function (DUF4982) AMD17_RS07155 PF07745 Glycosyl hydrolase family 53 AMD17_RS07165 PF01381 Helix-turn-helix AMD17_RS07165 PF06114 IrrE N-terminal-like domain AMD17_RS07165 PF09856 Predicted transcriptional regulator (DUF2083) AMD17_RS07170 PF00171 Aldehyde dehydrogenase family AMD17_RS07175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD17_RS07175 PF02770 Acyl-CoA dehydrogenase, middle domain AMD17_RS07175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD17_RS07180 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS07185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD17_RS07185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD17_RS07185 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS07190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD17_RS07190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD17_RS07195 PF01545 Cation efflux family AMD17_RS07200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD17_RS07200 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS07200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD17_RS07205 PF04542 Sigma-70 region 2 AMD17_RS07205 PF08281 Sigma-70, region 4 AMD17_RS07215 PF13180 PDZ domain AMD17_RS07220 PF06421 GTP-binding protein LepA C-terminus AMD17_RS07220 PF03144 Elongation factor Tu domain 2 AMD17_RS07220 PF00009 Elongation factor Tu GTP binding domain AMD17_RS07220 PF00679 Elongation factor G C-terminus AMD17_RS07225 PF10502 Signal peptidase, peptidase S26 AMD17_RS07235 PF00035 Double-stranded RNA binding motif AMD17_RS07235 PF14622 Ribonuclease-III-like AMD17_RS07240 PF01926 50S ribosome-binding GTPase AMD17_RS07240 PF07650 KH domain AMD17_RS07245 PF02565 Recombination protein O C terminal AMD17_RS07245 PF11967 Recombination protein O N terminal AMD17_RS07255 PF05958 tRNA (Uracil-5-)-methyltransferase AMD17_RS07260 PF01928 CYTH domain AMD17_RS07265 PF01323 DSBA-like thioredoxin domain AMD17_RS07270 PF01593 Flavin containing amine oxidoreductase AMD17_RS07275 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD17_RS07280 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD17_RS07285 PF00156 Phosphoribosyl transferase domain AMD17_RS07290 PF01048 Phosphorylase superfamily AMD17_RS07295 PF00313 'Cold-shock' DNA-binding domain AMD17_RS07300 PF01494 FAD binding domain AMD17_RS07310 PF08494 DEAD/H associated AMD17_RS07310 PF00270 DEAD/DEAH box helicase AMD17_RS07310 PF00271 Helicase conserved C-terminal domain AMD17_RS07315 PF04675 DNA ligase N terminus AMD17_RS07315 PF01068 ATP dependent DNA ligase domain AMD17_RS07315 PF04679 ATP dependent DNA ligase C terminal region AMD17_RS07325 PF04675 DNA ligase N terminus AMD17_RS07325 PF01068 ATP dependent DNA ligase domain AMD17_RS07325 PF04679 ATP dependent DNA ligase C terminal region AMD17_RS07340 PF00072 Response regulator receiver domain AMD17_RS07340 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS07355 PF00108 Thiolase, N-terminal domain AMD17_RS07355 PF02803 Thiolase, C-terminal domain AMD17_RS07360 PF03797 Autotransporter beta-domain AMD17_RS07360 PF12951 Passenger-associated-transport-repeat AMD17_RS07360 PF00082 Subtilase family AMD17_RS07365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD17_RS07365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD17_RS07375 PF01863 Protein of unknown function DUF45 AMD17_RS07380 PF07043 Protein of unknown function (DUF1328) AMD17_RS07390 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD17_RS07415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD17_RS07425 PF03831 PhnA domain AMD17_RS07425 PF08274 PhnA Zinc-Ribbon AMD17_RS07430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD17_RS07435 PF07690 Major Facilitator Superfamily AMD17_RS07470 PF09924 Uncharacterised conserved protein (DUF2156) AMD17_RS07470 PF03706 Lysylphosphatidylglycerol synthase TM region AMD17_RS07480 PF01042 Endoribonuclease L-PSP AMD17_RS07525 PF04542 Sigma-70 region 2 AMD17_RS07525 PF04545 Sigma-70, region 4 AMD17_RS07545 PF04060 Putative Fe-S cluster AMD17_RS07555 PF01588 Putative tRNA binding domain AMD17_RS07555 PF09334 tRNA synthetases class I (M) AMD17_RS07570 PF00005 ABC transporter AMD17_RS07570 PF13732 Domain of unknown function (DUF4162) AMD17_RS07575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD17_RS07580 PF00324 Amino acid permease AMD17_RS07585 PF02574 Homocysteine S-methyltransferase AMD17_RS07595 PF02592 Putative vitamin uptake transporter AMD17_RS07615 PF03551 Transcriptional regulator PadR-like family AMD17_RS07635 PF03653 Uncharacterised protein family (UPF0093) AMD17_RS07650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD17_RS07655 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD17_RS07655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD17_RS07655 PF14579 Helix-hairpin-helix motif AMD17_RS07655 PF01336 OB-fold nucleic acid binding domain AMD17_RS07655 PF02811 PHP domain AMD17_RS07660 PF01351 Ribonuclease HII AMD17_RS07665 PF02684 Lipid-A-disaccharide synthetase AMD17_RS07670 PF00132 Bacterial transferase hexapeptide (six repeats) AMD17_RS07670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD17_RS07675 PF07977 FabA-like domain AMD17_RS07680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD17_RS07680 PF00132 Bacterial transferase hexapeptide (six repeats) AMD17_RS07690 PF01103 Surface antigen AMD17_RS07690 PF07244 Surface antigen variable number repeat AMD17_RS07695 PF02163 Peptidase family M50 AMD17_RS07695 PF17820 PDZ domain AMD17_RS07700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD17_RS07700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMD17_RS07700 PF13288 DXP reductoisomerase C-terminal domain AMD17_RS07710 PF01255 Putative undecaprenyl diphosphate synthase AMD17_RS07715 PF01765 Ribosome recycling factor AMD17_RS07720 PF00696 Amino acid kinase family AMD17_RS07725 PF00072 Response regulator receiver domain AMD17_RS07725 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS07730 PF00889 Elongation factor TS AMD17_RS07735 PF00318 Ribosomal protein S2 AMD17_RS07770 PF00557 Metallopeptidase family M24 AMD17_RS07775 PF01909 Nucleotidyltransferase domain AMD17_RS07775 PF01966 HD domain AMD17_RS07775 PF08335 GlnD PII-uridylyltransferase AMD17_RS07780 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD17_RS07780 PF14602 Hexapeptide repeat of succinyl-transferase AMD17_RS07780 PF00132 Bacterial transferase hexapeptide (six repeats) AMD17_RS07785 PF03960 ArsC family AMD17_RS07790 PF01546 Peptidase family M20/M25/M40 AMD17_RS07790 PF07687 Peptidase dimerisation domain AMD17_RS07795 PF13537 Glutamine amidotransferase domain AMD17_RS07795 PF00733 Asparagine synthase AMD17_RS07805 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS07805 PF00593 TonB dependent receptor AMD17_RS07820 PF00210 Ferritin-like domain AMD17_RS07825 PF05724 Thiopurine S-methyltransferase (TPMT) AMD17_RS07835 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD17_RS07835 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD17_RS07850 PF02321 Outer membrane efflux protein AMD17_RS07855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS07855 PF00529 HlyD membrane-fusion protein of T1SS AMD17_RS07860 PF07690 Major Facilitator Superfamily AMD17_RS07870 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD17_RS07870 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD17_RS07870 PF14310 Fibronectin type III-like domain AMD17_RS07880 PF00854 POT family AMD17_RS07905 PF12802 MarR family AMD17_RS07910 PF01432 Peptidase family M3 AMD17_RS07915 PF00255 Glutathione peroxidase AMD17_RS07920 PF00970 Oxidoreductase FAD-binding domain AMD17_RS07920 PF00175 Oxidoreductase NAD-binding domain AMD17_RS07925 PF00005 ABC transporter AMD17_RS07930 PF05681 Fumarate hydratase (Fumerase) AMD17_RS07930 PF05683 Fumarase C-terminus AMD17_RS07940 PF00484 Carbonic anhydrase AMD17_RS07945 PF02253 Phospholipase A1 AMD17_RS07955 PF00313 'Cold-shock' DNA-binding domain AMD17_RS07970 PF00899 ThiF family AMD17_RS07975 PF01026 TatD related DNase AMD17_RS07990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD17_RS07990 PF02770 Acyl-CoA dehydrogenase, middle domain AMD17_RS07990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD17_RS08000 PF00043 Glutathione S-transferase, C-terminal domain AMD17_RS08000 PF02798 Glutathione S-transferase, N-terminal domain AMD17_RS08010 PF00733 Asparagine synthase AMD17_RS08010 PF13537 Glutamine amidotransferase domain AMD17_RS08015 PF03358 NADPH-dependent FMN reductase AMD17_RS08020 PF00772 DnaB-like helicase N terminal domain AMD17_RS08020 PF03796 DnaB-like helicase C terminal domain AMD17_RS08025 PF00875 DNA photolyase AMD17_RS08025 PF03441 FAD binding domain of DNA photolyase AMD17_RS08030 PF05736 OprF membrane domain AMD17_RS08030 PF00691 OmpA family AMD17_RS08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS08035 PF03466 LysR substrate binding domain AMD17_RS08050 PF00529 HlyD membrane-fusion protein of T1SS AMD17_RS08050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS08055 PF00873 AcrB/AcrD/AcrF family AMD17_RS08060 PF00106 short chain dehydrogenase AMD17_RS08065 PF02321 Outer membrane efflux protein AMD17_RS08070 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS08080 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS08145 PF01527 Transposase AMD17_RS08180 PF00082 Subtilase family AMD17_RS08185 PF01668 SmpB protein AMD17_RS08190 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD17_RS08195 PF03658 RnfH family Ubiquitin AMD17_RS08200 PF04355 SmpA / OmlA family AMD17_RS08205 PF01475 Ferric uptake regulator family AMD17_RS08210 PF02463 RecF/RecN/SMC N terminal domain AMD17_RS08215 PF01628 HrcA protein C terminal domain AMD17_RS08215 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD17_RS08220 PF01025 GrpE AMD17_RS08225 PF00012 Hsp70 protein AMD17_RS08230 PF00226 DnaJ domain AMD17_RS08230 PF01556 DnaJ C terminal domain AMD17_RS08230 PF00684 DnaJ central domain AMD17_RS08235 PF08543 Phosphomethylpyrimidine kinase AMD17_RS08260 PF00664 ABC transporter transmembrane region AMD17_RS08260 PF00005 ABC transporter AMD17_RS08260 PF03412 Peptidase C39 family AMD17_RS08265 PF03466 LysR substrate binding domain AMD17_RS08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS08270 PF00664 ABC transporter transmembrane region AMD17_RS08270 PF00005 ABC transporter AMD17_RS08275 PF01205 Uncharacterized protein family UPF0029 AMD17_RS08280 PF03641 Possible lysine decarboxylase AMD17_RS08285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD17_RS08285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS08290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD17_RS08290 PF02817 e3 binding domain AMD17_RS08290 PF00364 Biotin-requiring enzyme AMD17_RS08295 PF16078 2-oxoglutarate dehydrogenase N-terminus AMD17_RS08295 PF02779 Transketolase, pyrimidine binding domain AMD17_RS08295 PF16870 2-oxoglutarate dehydrogenase C-terminal AMD17_RS08295 PF00676 Dehydrogenase E1 component AMD17_RS08305 PF08007 Cupin superfamily protein AMD17_RS08315 PF08328 Adenylosuccinate lyase C-terminal AMD17_RS08315 PF00206 Lyase AMD17_RS08325 PF03471 Transporter associated domain AMD17_RS08325 PF01595 Cyclin M transmembrane N-terminal domain AMD17_RS08325 PF00571 CBS domain AMD17_RS08330 PF00206 Lyase AMD17_RS08330 PF10415 Fumarase C C-terminus AMD17_RS08355 PF00005 ABC transporter AMD17_RS08360 PF00392 Bacterial regulatory proteins, gntR family AMD17_RS08365 PF00255 Glutathione peroxidase AMD17_RS08370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD17_RS08370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD17_RS08375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD17_RS08375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD17_RS08375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD17_RS08380 PF04102 SlyX AMD17_RS08395 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS08400 PF07690 Major Facilitator Superfamily AMD17_RS08405 PF00294 pfkB family carbohydrate kinase AMD17_RS08415 PF02310 B12 binding domain AMD17_RS08415 PF02607 B12 binding domain AMD17_RS08415 PF00809 Pterin binding enzyme AMD17_RS08415 PF02574 Homocysteine S-methyltransferase AMD17_RS08415 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD17_RS08420 PF02574 Homocysteine S-methyltransferase AMD17_RS08420 PF00809 Pterin binding enzyme AMD17_RS08425 PF01209 ubiE/COQ5 methyltransferase family AMD17_RS08430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD17_RS08430 PF02770 Acyl-CoA dehydrogenase, middle domain AMD17_RS08430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD17_RS08445 PF08461 Ribonuclease R winged-helix domain AMD17_RS08445 PF00575 S1 RNA binding domain AMD17_RS08445 PF17876 Cold shock domain AMD17_RS08445 PF08206 Ribonuclease B OB domain AMD17_RS08445 PF00773 RNB domain AMD17_RS08455 PF00588 SpoU rRNA Methylase family AMD17_RS08455 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD17_RS08460 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS08465 PF00929 Exonuclease AMD17_RS08475 PF01895 PhoU domain AMD17_RS08480 PF00005 ABC transporter AMD17_RS08485 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS08490 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS08495 PF12849 PBP superfamily domain AMD17_RS08500 PF12849 PBP superfamily domain AMD17_RS08515 PF00484 Carbonic anhydrase AMD17_RS08520 PF00916 Sulfate permease family AMD17_RS08520 PF01740 STAS domain AMD17_RS08525 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD17_RS08525 PF10576 Iron-sulfur binding domain of endonuclease III AMD17_RS08525 PF00633 Helix-hairpin-helix motif AMD17_RS08535 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS08540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD17_RS08540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD17_RS08545 PF00293 NUDIX domain AMD17_RS08550 PF00581 Rhodanese-like domain AMD17_RS08580 PF16326 ABC transporter C-terminal domain AMD17_RS08580 PF12848 ABC transporter AMD17_RS08580 PF00005 ABC transporter AMD17_RS08585 PF01170 Putative RNA methylase family UPF0020 AMD17_RS08585 PF02926 THUMP domain AMD17_RS08585 PF10672 S-adenosylmethionine-dependent methyltransferase AMD17_RS08590 PF01513 ATP-NAD kinase AMD17_RS08615 PF00929 Exonuclease AMD17_RS08615 PF08411 Exonuclease C-terminal AMD17_RS08620 PF01494 FAD binding domain AMD17_RS08625 PF00266 Aminotransferase class-V AMD17_RS08635 PF06052 3-hydroxyanthranilic acid dioxygenase AMD17_RS08640 PF00484 Carbonic anhydrase AMD17_RS08685 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS08685 PF00072 Response regulator receiver domain AMD17_RS08700 PF04299 Putative FMN-binding domain AMD17_RS08720 PF00152 tRNA synthetases class II (D, K and N) AMD17_RS08720 PF01336 OB-fold nucleic acid binding domain AMD17_RS08725 PF01521 Iron-sulphur cluster biosynthesis AMD17_RS08730 PF01250 Ribosomal protein S6 AMD17_RS08735 PF01084 Ribosomal protein S18 AMD17_RS08740 PF03948 Ribosomal protein L9, C-terminal domain AMD17_RS08740 PF01281 Ribosomal protein L9, N-terminal domain AMD17_RS08745 PF02463 RecF/RecN/SMC N terminal domain AMD17_RS08750 PF04354 ZipA, C-terminal FtsZ-binding domain AMD17_RS08760 PF00155 Aminotransferase class I and II AMD17_RS08765 PF01653 NAD-dependent DNA ligase adenylation domain AMD17_RS08765 PF03120 NAD-dependent DNA ligase OB-fold domain AMD17_RS08765 PF12826 Helix-hairpin-helix motif AMD17_RS08765 PF00533 BRCA1 C Terminus (BRCT) domain AMD17_RS08765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD17_RS08770 PF00152 tRNA synthetases class II (D, K and N) AMD17_RS08780 PF01008 Initiation factor 2 subunit family AMD17_RS08785 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD17_RS08785 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD17_RS08800 PF17391 Urocanase N-terminal domain AMD17_RS08800 PF17392 Urocanase C-terminal domain AMD17_RS08800 PF01175 Urocanase Rossmann-like domain AMD17_RS08810 PF00221 Aromatic amino acid lyase AMD17_RS08815 PF07969 Amidohydrolase family AMD17_RS08830 PF07702 UTRA domain AMD17_RS08830 PF00392 Bacterial regulatory proteins, gntR family AMD17_RS08860 PF01794 Ferric reductase like transmembrane component AMD17_RS08865 PF00174 Oxidoreductase molybdopterin binding domain AMD17_RS08870 PF00266 Aminotransferase class-V AMD17_RS08875 PF01817 Chorismate mutase type II AMD17_RS08875 PF00800 Prephenate dehydratase AMD17_RS08875 PF01842 ACT domain AMD17_RS08880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD17_RS08890 PF03544 Gram-negative bacterial TonB protein C-terminal AMD17_RS08895 PF02403 Seryl-tRNA synthetase N-terminal domain AMD17_RS08895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD17_RS08900 PF02525 Flavodoxin-like fold AMD17_RS08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS08905 PF03466 LysR substrate binding domain AMD17_RS08935 PF13276 HTH-like domain AMD17_RS08935 PF00665 Integrase core domain AMD17_RS08935 PF13333 Integrase core domain AMD17_RS08955 PF00672 HAMP domain AMD17_RS08955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS08955 PF02203 Tar ligand binding domain homologue AMD17_RS08960 PF01494 FAD binding domain AMD17_RS08980 PF00072 Response regulator receiver domain AMD17_RS08980 PF13188 PAS domain AMD17_RS08980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS08980 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS08980 PF08448 PAS fold AMD17_RS08985 PF01627 Hpt domain AMD17_RS08985 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS08985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD17_RS08985 PF00072 Response regulator receiver domain AMD17_RS08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS08985 PF00672 HAMP domain AMD17_RS08990 PF06745 KaiC AMD17_RS08995 PF00072 Response regulator receiver domain AMD17_RS08995 PF13426 PAS domain AMD17_RS08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS09005 PF03918 Cytochrome C biogenesis protein AMD17_RS09010 PF08534 Redoxin AMD17_RS09015 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD17_RS09015 PF01578 Cytochrome C assembly protein AMD17_RS09020 PF03100 CcmE AMD17_RS09030 PF01578 Cytochrome C assembly protein AMD17_RS09035 PF00082 Subtilase family AMD17_RS09045 PF08281 Sigma-70, region 4 AMD17_RS09045 PF04542 Sigma-70 region 2 AMD17_RS09060 PF00034 Cytochrome c AMD17_RS09075 PF05523 WxcM-like, C-terminal AMD17_RS09095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD17_RS09100 PF01943 Polysaccharide biosynthesis protein AMD17_RS09105 PF00535 Glycosyl transferase family 2 AMD17_RS09120 PF08241 Methyltransferase domain AMD17_RS09140 PF13579 Glycosyl transferase 4-like domain AMD17_RS09140 PF00534 Glycosyl transferases group 1 AMD17_RS09155 PF00005 ABC transporter AMD17_RS09160 PF00005 ABC transporter AMD17_RS09160 PF00664 ABC transporter transmembrane region AMD17_RS09165 PF07690 Major Facilitator Superfamily AMD17_RS09170 PF00296 Luciferase-like monooxygenase AMD17_RS09185 PF01595 Cyclin M transmembrane N-terminal domain AMD17_RS09185 PF03471 Transporter associated domain AMD17_RS09185 PF00571 CBS domain AMD17_RS09195 PF01384 Phosphate transporter family AMD17_RS09210 PF00986 DNA gyrase B subunit, carboxyl terminus AMD17_RS09210 PF00204 DNA gyrase B AMD17_RS09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS09210 PF01751 Toprim domain AMD17_RS09220 PF06418 CTP synthase N-terminus AMD17_RS09220 PF00117 Glutamine amidotransferase class-I AMD17_RS09225 PF00793 DAHP synthetase I family AMD17_RS09235 PF03952 Enolase, N-terminal domain AMD17_RS09235 PF00113 Enolase, C-terminal TIM barrel domain AMD17_RS09240 PF04977 Septum formation initiator AMD17_RS09245 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD17_RS09250 PF02542 YgbB family AMD17_RS09255 PF01142 tRNA pseudouridine synthase D (TruD) AMD17_RS09260 PF01713 Smr domain AMD17_RS09265 PF01975 Survival protein SurE AMD17_RS09275 PF09335 SNARE associated Golgi protein AMD17_RS09280 PF01551 Peptidase family M23 AMD17_RS09280 PF01476 LysM domain AMD17_RS09285 PF04430 Protein of unknown function (DUF498/DUF598) AMD17_RS09290 PF01985 CRS1 / YhbY (CRM) domain AMD17_RS09295 PF01728 FtsJ-like methyltransferase AMD17_RS09300 PF01434 Peptidase family M41 AMD17_RS09300 PF00004 ATPase family associated with various cellular activities (AAA) AMD17_RS09300 PF06480 FtsH Extracellular AMD17_RS09300 PF17862 AAA+ lid domain AMD17_RS09305 PF00809 Pterin binding enzyme AMD17_RS09315 PF17209 Hfq protein AMD17_RS09320 PF01926 50S ribosome-binding GTPase AMD17_RS09320 PF13167 GTP-binding GTPase N-terminal AMD17_RS09320 PF16360 GTP-binding GTPase Middle Region AMD17_RS09325 PF02464 Competence-damaged protein AMD17_RS09330 PF03109 ABC1 family AMD17_RS09335 PF00717 Peptidase S24-like AMD17_RS09335 PF01726 LexA DNA binding domain AMD17_RS09340 PF00154 recA bacterial DNA recombination protein AMD17_RS09345 PF02631 RecX family AMD17_RS09350 PF02272 DHHA1 domain AMD17_RS09350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD17_RS09350 PF01411 tRNA synthetases class II (A) AMD17_RS09355 PF02599 Global regulator protein family AMD17_RS09365 PF08447 PAS fold AMD17_RS09365 PF13426 PAS domain AMD17_RS09365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS09370 PF17954 Quercetinase C-terminal cupin domain AMD17_RS09370 PF02678 Pirin AMD17_RS09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS09380 PF03466 LysR substrate binding domain AMD17_RS09405 PF02581 Thiamine monophosphate synthase AMD17_RS09405 PF08543 Phosphomethylpyrimidine kinase AMD17_RS09420 PF02562 PhoH-like protein AMD17_RS09420 PF13638 PIN domain AMD17_RS09425 PF00578 AhpC/TSA family AMD17_RS09440 PF00701 Dihydrodipicolinate synthetase family AMD17_RS09450 PF00037 4Fe-4S binding domain AMD17_RS09450 PF11953 Domain of unknown function (DUF3470) AMD17_RS09455 PF05035 2-keto-3-deoxy-galactonokinase AMD17_RS09460 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD17_RS09465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD17_RS09465 PF13378 Enolase C-terminal domain-like AMD17_RS09470 PF01081 KDPG and KHG aldolase AMD17_RS09480 PF03466 LysR substrate binding domain AMD17_RS09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS09495 PF00942 Cellulose binding domain AMD17_RS09495 PF03442 Carbohydrate binding domain X2 AMD17_RS09510 PF16338 Domain of unknown function (DUF4968) AMD17_RS09510 PF17137 Domain of unknown function (DUF5110) AMD17_RS09510 PF01055 Glycosyl hydrolases family 31 AMD17_RS09520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD17_RS09520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD17_RS09530 PF00083 Sugar (and other) transporter AMD17_RS09540 PF01520 N-acetylmuramoyl-L-alanine amidase AMD17_RS09545 PF02649 Type I GTP cyclohydrolase folE2 AMD17_RS09555 PF12626 Polymerase A arginine-rich C-terminus AMD17_RS09555 PF01743 Poly A polymerase head domain AMD17_RS09555 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD17_RS09560 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD17_RS09565 PF02548 Ketopantoate hydroxymethyltransferase AMD17_RS09570 PF02569 Pantoate-beta-alanine ligase AMD17_RS09575 PF02261 Aspartate decarboxylase AMD17_RS09580 PF00342 Phosphoglucose isomerase AMD17_RS09600 PF14310 Fibronectin type III-like domain AMD17_RS09600 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD17_RS09600 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD17_RS09605 PF00474 Sodium:solute symporter family AMD17_RS09610 PF00563 EAL domain AMD17_RS09610 PF01590 GAF domain AMD17_RS09610 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS09610 PF00360 Phytochrome region AMD17_RS09615 PF00150 Cellulase (glycosyl hydrolase family 5) AMD17_RS09615 PF02013 Cellulose or protein binding domain AMD17_RS09620 PF00072 Response regulator receiver domain AMD17_RS09630 PF04551 GcpE protein AMD17_RS09635 PF01569 PAP2 superfamily AMD17_RS09640 PF07690 Major Facilitator Superfamily AMD17_RS09645 PF01177 Asp/Glu/Hydantoin racemase AMD17_RS09650 PF00892 EamA-like transporter family AMD17_RS09655 PF01565 FAD binding domain AMD17_RS09655 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD17_RS09660 PF01180 Dihydroorotate dehydrogenase AMD17_RS09675 PF00171 Aldehyde dehydrogenase family AMD17_RS09690 PF00535 Glycosyl transferase family 2 AMD17_RS09695 PF01522 Polysaccharide deacetylase AMD17_RS09695 PF14883 Hypothetical glycosyl hydrolase family 13 AMD17_RS09705 PF08479 POTRA domain, ShlB-type AMD17_RS09705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD17_RS09705 PF17287 POTRA domain AMD17_RS09710 PF05594 Haemagluttinin repeat AMD17_RS09710 PF04829 Pre-toxin domain with VENN motif AMD17_RS09710 PF13332 Hemagglutinin repeat AMD17_RS09715 PF05594 Haemagluttinin repeat AMD17_RS09715 PF04829 Pre-toxin domain with VENN motif AMD17_RS09715 PF13332 Hemagglutinin repeat AMD17_RS09720 PF05594 Haemagluttinin repeat AMD17_RS09720 PF05860 haemagglutination activity domain AMD17_RS09720 PF13018 Extended Signal Peptide of Type V secretion system AMD17_RS09720 PF13332 Hemagglutinin repeat AMD17_RS09720 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain AMD17_RS09730 PF13840 ACT domain AMD17_RS09730 PF00742 Homoserine dehydrogenase AMD17_RS09730 PF03447 Homoserine dehydrogenase, NAD binding domain AMD17_RS09730 PF01842 ACT domain AMD17_RS09730 PF00696 Amino acid kinase family AMD17_RS09735 PF00288 GHMP kinases N terminal domain AMD17_RS09735 PF08544 GHMP kinases C terminal AMD17_RS09745 PF14821 Threonine synthase N terminus AMD17_RS09745 PF00291 Pyridoxal-phosphate dependent enzyme AMD17_RS09755 PF00027 Cyclic nucleotide-binding domain AMD17_RS09755 PF13545 Crp-like helix-turn-helix domain AMD17_RS09760 PF13393 Histidyl-tRNA synthetase AMD17_RS09760 PF03129 Anticodon binding domain AMD17_RS09770 PF01634 ATP phosphoribosyltransferase AMD17_RS09770 PF08029 HisG, C-terminal domain AMD17_RS09775 PF00815 Histidinol dehydrogenase AMD17_RS09780 PF00155 Aminotransferase class I and II AMD17_RS09785 PF00475 Imidazoleglycerol-phosphate dehydratase AMD17_RS09790 PF00117 Glutamine amidotransferase class-I AMD17_RS09795 PF00977 Histidine biosynthesis protein AMD17_RS09800 PF00977 Histidine biosynthesis protein AMD17_RS09805 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD17_RS09805 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD17_RS09825 PF03079 ARD/ARD' family AMD17_RS09830 PF00596 Class II Aldolase and Adducin N-terminal domain AMD17_RS09835 PF13520 Amino acid permease AMD17_RS09840 PF13520 Amino acid permease AMD17_RS09850 PF01842 ACT domain AMD17_RS09850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD17_RS09850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD17_RS09855 PF01565 FAD binding domain AMD17_RS09855 PF02913 FAD linked oxidases, C-terminal domain AMD17_RS09875 PF08207 Elongation factor P (EF-P) KOW-like domain AMD17_RS09875 PF09285 Elongation factor P, C-terminal AMD17_RS09875 PF01132 Elongation factor P (EF-P) OB domain AMD17_RS09880 PF00106 short chain dehydrogenase AMD17_RS09885 PF00682 HMGL-like AMD17_RS09895 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS09905 PF07664 Ferrous iron transport protein B C terminus AMD17_RS09905 PF02421 Ferrous iron transport protein B AMD17_RS09905 PF07670 Nucleoside recognition AMD17_RS09920 PF00155 Aminotransferase class I and II AMD17_RS09925 PF03473 MOSC domain AMD17_RS09925 PF03475 3-alpha domain AMD17_RS09930 PF05173 Dihydrodipicolinate reductase, C-terminus AMD17_RS09930 PF01113 Dihydrodipicolinate reductase, N-terminus AMD17_RS09935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD17_RS09935 PF00117 Glutamine amidotransferase class-I AMD17_RS09945 PF02142 MGS-like domain AMD17_RS09945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD17_RS09945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD17_RS09950 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD17_RS09950 PF03449 Transcription elongation factor, N-terminal AMD17_RS09960 PF17768 RecJ OB domain AMD17_RS09960 PF02272 DHHA1 domain AMD17_RS09960 PF01368 DHH family AMD17_RS10005 PF04397 LytTr DNA-binding domain AMD17_RS10005 PF00072 Response regulator receiver domain AMD17_RS10010 PF03462 PCRF domain AMD17_RS10010 PF00472 RF-1 domain AMD17_RS10015 PF00152 tRNA synthetases class II (D, K and N) AMD17_RS10015 PF01336 OB-fold nucleic acid binding domain AMD17_RS10020 PF00072 Response regulator receiver domain AMD17_RS10025 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS10025 PF01627 Hpt domain AMD17_RS10025 PF00072 Response regulator receiver domain AMD17_RS10030 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS10035 PF13193 AMP-binding enzyme C-terminal domain AMD17_RS10035 PF00501 AMP-binding enzyme AMD17_RS10045 PF00330 Aconitase family (aconitate hydratase) AMD17_RS10045 PF00694 Aconitase C-terminal domain AMD17_RS10060 PF11791 Aconitate B N-terminal domain AMD17_RS10060 PF06434 Aconitate hydratase 2 N-terminus AMD17_RS10060 PF00330 Aconitase family (aconitate hydratase) AMD17_RS10065 PF00561 alpha/beta hydrolase fold AMD17_RS10070 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS10070 PF03707 Bacterial signalling protein N terminal repeat AMD17_RS10070 PF00563 EAL domain AMD17_RS10075 PF01339 CheB methylesterase AMD17_RS10075 PF00072 Response regulator receiver domain AMD17_RS10080 PF03975 CheD chemotactic sensory transduction AMD17_RS10085 PF01739 CheR methyltransferase, SAM binding domain AMD17_RS10085 PF03705 CheR methyltransferase, all-alpha domain AMD17_RS10090 PF02203 Tar ligand binding domain homologue AMD17_RS10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10090 PF00672 HAMP domain AMD17_RS10095 PF02203 Tar ligand binding domain homologue AMD17_RS10095 PF00672 HAMP domain AMD17_RS10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10100 PF00672 HAMP domain AMD17_RS10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10100 PF02203 Tar ligand binding domain homologue AMD17_RS10110 PF00672 HAMP domain AMD17_RS10110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10110 PF02203 Tar ligand binding domain homologue AMD17_RS10115 PF02203 Tar ligand binding domain homologue AMD17_RS10115 PF00672 HAMP domain AMD17_RS10115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10120 PF00672 HAMP domain AMD17_RS10125 PF02203 Tar ligand binding domain homologue AMD17_RS10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10125 PF00672 HAMP domain AMD17_RS10140 PF02203 Tar ligand binding domain homologue AMD17_RS10140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10140 PF00672 HAMP domain AMD17_RS10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10145 PF08269 Cache domain AMD17_RS10155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10155 PF00672 HAMP domain AMD17_RS10155 PF02203 Tar ligand binding domain homologue AMD17_RS10160 PF01584 CheW-like domain AMD17_RS10160 PF01627 Hpt domain AMD17_RS10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS10160 PF02895 Signal transducing histidine kinase, homodimeric domain AMD17_RS10160 PF09078 CheY binding AMD17_RS10165 PF00072 Response regulator receiver domain AMD17_RS10175 PF01584 CheW-like domain AMD17_RS10180 PF13614 AAA domain AMD17_RS10185 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD17_RS10185 PF00691 OmpA family AMD17_RS10190 PF01618 MotA/TolQ/ExbB proton channel family AMD17_RS10205 PF00069 Protein kinase domain AMD17_RS10205 PF03793 PASTA domain AMD17_RS10275 PF13186 Iron-sulfur cluster-binding domain AMD17_RS10275 PF04055 Radical SAM superfamily AMD17_RS10290 PF01584 CheW-like domain AMD17_RS10290 PF01627 Hpt domain AMD17_RS10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS10290 PF02895 Signal transducing histidine kinase, homodimeric domain AMD17_RS10290 PF00072 Response regulator receiver domain AMD17_RS10295 PF04344 Chemotaxis phosphatase, CheZ AMD17_RS10300 PF00072 Response regulator receiver domain AMD17_RS10305 PF04545 Sigma-70, region 4 AMD17_RS10305 PF04542 Sigma-70 region 2 AMD17_RS10305 PF04539 Sigma-70 region 3 AMD17_RS10310 PF10609 NUBPL iron-transfer P-loop NTPase AMD17_RS10315 PF00448 SRP54-type protein, GTPase domain AMD17_RS10320 PF00771 FHIPEP family AMD17_RS10325 PF01312 FlhB HrpN YscU SpaS Family AMD17_RS10330 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS10330 PF03707 Bacterial signalling protein N terminal repeat AMD17_RS10330 PF00563 EAL domain AMD17_RS10335 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS10345 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS10350 PF01311 Bacterial export proteins, family 1 AMD17_RS10355 PF01313 Bacterial export proteins, family 3 AMD17_RS10360 PF00813 FliP family AMD17_RS10365 PF04347 Flagellar biosynthesis protein, FliO AMD17_RS10370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD17_RS10375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD17_RS10375 PF02154 Flagellar motor switch protein FliM AMD17_RS10395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD17_RS10395 PF18269 T3SS EscN ATPase C-terminal domain AMD17_RS10405 PF14841 FliG middle domain AMD17_RS10405 PF14842 FliG N-terminal domain AMD17_RS10405 PF01706 FliG C-terminal domain AMD17_RS10410 PF08345 Flagellar M-ring protein C-terminal AMD17_RS10410 PF01514 Secretory protein of YscJ/FliF family AMD17_RS10415 PF02049 Flagellar hook-basal body complex protein FliE AMD17_RS10420 PF00535 Glycosyl transferase family 2 AMD17_RS10420 PF00534 Glycosyl transferases group 1 AMD17_RS10455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD17_RS10455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD17_RS10465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD17_RS10470 PF00158 Sigma-54 interaction domain AMD17_RS10470 PF02954 Bacterial regulatory protein, Fis family AMD17_RS10470 PF06490 Flagellar regulatory protein FleQ AMD17_RS10475 PF01339 CheB methylesterase AMD17_RS10475 PF00072 Response regulator receiver domain AMD17_RS10480 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD17_RS10480 PF04552 Sigma-54, DNA binding domain AMD17_RS10480 PF04963 Sigma-54 factor, core binding domain AMD17_RS10485 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS10485 PF00072 Response regulator receiver domain AMD17_RS10500 PF02561 Flagellar protein FliS AMD17_RS10505 PF07196 Flagellin hook IN motif AMD17_RS10505 PF07195 Flagellar hook-associated protein 2 C-terminus AMD17_RS10505 PF02465 Flagellar hook-associated protein 2 N-terminus AMD17_RS10510 PF00669 Bacterial flagellin N-terminal helical region AMD17_RS10510 PF00700 Bacterial flagellin C-terminal helical region AMD17_RS10515 PF00700 Bacterial flagellin C-terminal helical region AMD17_RS10515 PF00669 Bacterial flagellin N-terminal helical region AMD17_RS10520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD17_RS10520 PF07196 Flagellin hook IN motif AMD17_RS10525 PF10135 Rod binding protein AMD17_RS10525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD17_RS10530 PF02119 Flagellar P-ring protein AMD17_RS10535 PF02107 Flagellar L-ring protein AMD17_RS10540 PF00460 Flagella basal body rod protein AMD17_RS10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD17_RS10545 PF00460 Flagella basal body rod protein AMD17_RS10545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD17_RS10550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD17_RS10550 PF00460 Flagella basal body rod protein AMD17_RS10550 PF07559 Flagellar basal body protein FlaE AMD17_RS10555 PF03963 Flagellar hook capping protein - N-terminal region AMD17_RS10560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD17_RS10560 PF00460 Flagella basal body rod protein AMD17_RS10570 PF00072 Response regulator receiver domain AMD17_RS10570 PF01584 CheW-like domain AMD17_RS10590 PF13188 PAS domain AMD17_RS10590 PF00989 PAS fold AMD17_RS10590 PF13426 PAS domain AMD17_RS10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS10590 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS10595 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS10595 PF03707 Bacterial signalling protein N terminal repeat AMD17_RS10595 PF00563 EAL domain AMD17_RS10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS10600 PF07730 Histidine kinase AMD17_RS10605 PF00563 EAL domain AMD17_RS10605 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS10605 PF03707 Bacterial signalling protein N terminal repeat AMD17_RS10615 PF12729 Four helix bundle sensory module for signal transduction AMD17_RS10615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS10615 PF00672 HAMP domain AMD17_RS10620 PF04356 Protein of unknown function (DUF489) AMD17_RS10630 PF00293 NUDIX domain AMD17_RS10635 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD17_RS10640 PF07724 AAA domain (Cdc48 subfamily) AMD17_RS10640 PF17871 AAA lid domain AMD17_RS10640 PF02861 Clp amino terminal domain, pathogenicity island component AMD17_RS10640 PF10431 C-terminal, D2-small domain, of ClpB protein AMD17_RS10640 PF00004 ATPase family associated with various cellular activities (AAA) AMD17_RS10645 PF01176 Translation initiation factor 1A / IF-1 AMD17_RS10650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD17_RS10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS10665 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMD17_RS10665 PF17854 FtsK alpha domain AMD17_RS10665 PF09397 Ftsk gamma domain AMD17_RS10665 PF01580 FtsK/SpoIIIE family AMD17_RS10675 PF03548 Outer membrane lipoprotein carrier protein LolA AMD17_RS10685 PF00004 ATPase family associated with various cellular activities (AAA) AMD17_RS10685 PF16193 AAA C-terminal domain AMD17_RS10685 PF12002 MgsA AAA+ ATPase C terminal AMD17_RS10690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMD17_RS10700 PF00108 Thiolase, N-terminal domain AMD17_RS10700 PF02803 Thiolase, C-terminal domain AMD17_RS10705 PF00378 Enoyl-CoA hydratase/isomerase AMD17_RS10705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD17_RS10705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD17_RS10715 PF00334 Nucleoside diphosphate kinase AMD17_RS10720 PF04055 Radical SAM superfamily AMD17_RS10730 PF13464 Domain of unknown function (DUF4115) AMD17_RS10740 PF01011 PQQ enzyme repeat AMD17_RS10740 PF13360 PQQ-like domain AMD17_RS10745 PF01926 50S ribosome-binding GTPase AMD17_RS10745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD17_RS10750 PF03453 MoeA N-terminal region (domain I and II) AMD17_RS10750 PF00994 Probable molybdopterin binding domain AMD17_RS10750 PF03454 MoeA C-terminal region (domain IV) AMD17_RS10755 PF00899 ThiF family AMD17_RS10780 PF00107 Zinc-binding dehydrogenase AMD17_RS10780 PF13823 Alcohol dehydrogenase GroES-associated AMD17_RS10780 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS10790 PF03372 Endonuclease/Exonuclease/phosphatase family AMD17_RS10800 PF00994 Probable molybdopterin binding domain AMD17_RS10800 PF03453 MoeA N-terminal region (domain I and II) AMD17_RS10800 PF03454 MoeA C-terminal region (domain IV) AMD17_RS10805 PF12804 MobA-like NTP transferase domain AMD17_RS10815 PF00561 alpha/beta hydrolase fold AMD17_RS10820 PF01566 Natural resistance-associated macrophage protein AMD17_RS10825 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD17_RS10825 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD17_RS10830 PF14437 MafB19-like deaminase AMD17_RS10835 PF00929 Exonuclease AMD17_RS10840 PF05552 Conserved TM helix AMD17_RS10840 PF00924 Mechanosensitive ion channel AMD17_RS10845 PF02896 PEP-utilising enzyme, TIM barrel domain AMD17_RS10845 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD17_RS10845 PF00391 PEP-utilising enzyme, mobile domain AMD17_RS10850 PF03618 Kinase/pyrophosphorylase AMD17_RS10870 PF01066 CDP-alcohol phosphatidyltransferase AMD17_RS10880 PF00561 alpha/beta hydrolase fold AMD17_RS10895 PF00355 Rieske [2Fe-2S] domain AMD17_RS10895 PF01266 FAD dependent oxidoreductase AMD17_RS10905 PF09371 Tex-like protein N-terminal domain AMD17_RS10905 PF00575 S1 RNA binding domain AMD17_RS10905 PF16921 Tex protein YqgF-like domain AMD17_RS10905 PF17674 HHH domain AMD17_RS10910 PF00072 Response regulator receiver domain AMD17_RS10910 PF09308 LuxQ, periplasmic AMD17_RS10910 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS10950 PF00034 Cytochrome c AMD17_RS10960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS10965 PF00873 AcrB/AcrD/AcrF family AMD17_RS10970 PF00873 AcrB/AcrD/AcrF family AMD17_RS10975 PF01081 KDPG and KHG aldolase AMD17_RS10980 PF00920 Dehydratase family AMD17_RS10985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD17_RS10990 PF02685 Glucokinase AMD17_RS10995 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD17_RS10995 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD17_RS11000 PF00005 ABC transporter AMD17_RS11000 PF17912 MalK OB fold domain AMD17_RS11010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD17_RS11015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD17_RS11020 PF00890 FAD binding domain AMD17_RS11020 PF02910 Fumarate reductase flavoprotein C-term AMD17_RS11030 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD17_RS11035 PF03937 Flavinator of succinate dehydrogenase AMD17_RS11045 PF12704 MacB-like periplasmic core domain AMD17_RS11045 PF02687 FtsX-like permease family AMD17_RS11050 PF00005 ABC transporter AMD17_RS11060 PF00753 Metallo-beta-lactamase superfamily AMD17_RS11060 PF03772 Competence protein AMD17_RS11065 PF01618 MotA/TolQ/ExbB proton channel family AMD17_RS11075 PF00664 ABC transporter transmembrane region AMD17_RS11075 PF00005 ABC transporter AMD17_RS11080 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD17_RS11085 PF02348 Cytidylyltransferase AMD17_RS11090 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD17_RS11100 PF01541 GIY-YIG catalytic domain AMD17_RS11100 PF02151 UvrB/uvrC motif AMD17_RS11100 PF08459 UvrC Helix-hairpin-helix N-terminal AMD17_RS11105 PF01066 CDP-alcohol phosphatidyltransferase AMD17_RS11125 PF00501 AMP-binding enzyme AMD17_RS11125 PF00668 Condensation domain AMD17_RS11125 PF00550 Phosphopantetheine attachment site AMD17_RS11125 PF13193 AMP-binding enzyme C-terminal domain AMD17_RS11130 PF00501 AMP-binding enzyme AMD17_RS11130 PF00668 Condensation domain AMD17_RS11130 PF00550 Phosphopantetheine attachment site AMD17_RS11130 PF00975 Thioesterase domain AMD17_RS11130 PF13193 AMP-binding enzyme C-terminal domain AMD17_RS11140 PF01527 Transposase AMD17_RS11145 PF13276 HTH-like domain AMD17_RS11145 PF13333 Integrase core domain AMD17_RS11145 PF00665 Integrase core domain AMD17_RS11155 PF00589 Phage integrase family AMD17_RS11165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD17_RS11165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD17_RS11165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD17_RS11175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD17_RS11185 PF17773 UPF0176 acylphosphatase like domain AMD17_RS11185 PF00581 Rhodanese-like domain AMD17_RS11190 PF00072 Response regulator receiver domain AMD17_RS11190 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS11195 PF10150 Ribonuclease E/G family AMD17_RS11195 PF12111 Polyribonucleotide phosphorylase C terminal AMD17_RS11195 PF00575 S1 RNA binding domain AMD17_RS11200 PF01479 S4 domain AMD17_RS11200 PF00849 RNA pseudouridylate synthase AMD17_RS11205 PF11737 Protein of unknown function (DUF3300) AMD17_RS11210 PF02535 ZIP Zinc transporter AMD17_RS11220 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD17_RS11225 PF01106 NifU-like domain AMD17_RS11280 PF00106 short chain dehydrogenase AMD17_RS11310 PF01494 FAD binding domain AMD17_RS11315 PF09335 SNARE associated Golgi protein AMD17_RS11325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD17_RS11335 PF07995 Glucose / Sorbosone dehydrogenase AMD17_RS11345 PF00144 Beta-lactamase AMD17_RS11350 PF00072 Response regulator receiver domain AMD17_RS11350 PF04397 LytTr DNA-binding domain AMD17_RS11355 PF06580 Histidine kinase AMD17_RS11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS11355 PF07694 5TMR of 5TMR-LYT AMD17_RS11370 PF00082 Subtilase family AMD17_RS11370 PF03797 Autotransporter beta-domain AMD17_RS11375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS11380 PF00873 AcrB/AcrD/AcrF family AMD17_RS11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS11390 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS11390 PF08448 PAS fold AMD17_RS11390 PF13426 PAS domain AMD17_RS11390 PF00072 Response regulator receiver domain AMD17_RS11395 PF00072 Response regulator receiver domain AMD17_RS11395 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS11400 PF12951 Passenger-associated-transport-repeat AMD17_RS11400 PF12951 Passenger-associated-transport-repeat AMD17_RS11405 PF08448 PAS fold AMD17_RS11405 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS11405 PF08447 PAS fold AMD17_RS11405 PF00563 EAL domain AMD17_RS11420 PF05974 Domain of unknown function (DUF892) AMD17_RS11435 PF10414 Sirohaem synthase dimerisation region AMD17_RS11435 PF14824 Sirohaem biosynthesis protein central AMD17_RS11435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD17_RS11450 PF05977 Transmembrane secretion effector AMD17_RS11460 PF07969 Amidohydrolase family AMD17_RS11470 PF00857 Isochorismatase family AMD17_RS11485 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS11485 PF00072 Response regulator receiver domain AMD17_RS11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS11505 PF03466 LysR substrate binding domain AMD17_RS11510 PF00361 Proton-conducting membrane transporter AMD17_RS11510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD17_RS11510 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AMD17_RS11515 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AMD17_RS11530 PF01381 Helix-turn-helix AMD17_RS11535 PF05284 Protein of unknown function (DUF736) AMD17_RS11540 PF04002 RadC-like JAB domain AMD17_RS11565 PF00589 Phage integrase family AMD17_RS11565 PF13356 Arm DNA-binding domain AMD17_RS11580 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS11580 PF00593 TonB dependent receptor AMD17_RS11595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMD17_RS11620 PF00593 TonB dependent receptor AMD17_RS11620 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS11630 PF10947 Protein of unknown function (DUF2628) AMD17_RS11640 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AMD17_RS11640 PF00722 Glycosyl hydrolases family 16 AMD17_RS11660 PF03412 Peptidase C39 family AMD17_RS11660 PF00664 ABC transporter transmembrane region AMD17_RS11660 PF00005 ABC transporter AMD17_RS11670 PF13614 AAA domain AMD17_RS11710 PF01751 Toprim domain AMD17_RS11710 PF01131 DNA topoisomerase AMD17_RS11715 PF00145 C-5 cytosine-specific DNA methylase AMD17_RS11765 PF17761 DUF1016 N-terminal domain AMD17_RS11765 PF06250 YhcG PDDEXK nuclease domain AMD17_RS11785 PF00892 EamA-like transporter family AMD17_RS11790 PF00892 EamA-like transporter family AMD17_RS11800 PF02525 Flavodoxin-like fold AMD17_RS11805 PF02798 Glutathione S-transferase, N-terminal domain AMD17_RS11805 PF00043 Glutathione S-transferase, C-terminal domain AMD17_RS11810 PF05544 Proline racemase AMD17_RS11815 PF03358 NADPH-dependent FMN reductase AMD17_RS11825 PF07690 Major Facilitator Superfamily AMD17_RS11830 PF12833 Helix-turn-helix domain AMD17_RS11830 PF02311 AraC-like ligand binding domain AMD17_RS11980 PF12462 DNA helicase IV / RNA helicase N terminal AMD17_RS11980 PF00580 UvrD/REP helicase N-terminal domain AMD17_RS11980 PF13361 UvrD-like helicase C-terminal domain AMD17_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS12055 PF03466 LysR substrate binding domain AMD17_RS12060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD17_RS12060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD17_RS12065 PF03401 Tripartite tricarboxylate transporter family receptor AMD17_RS12080 PF04002 RadC-like JAB domain AMD17_RS12115 PF00589 Phage integrase family AMD17_RS12115 PF13356 Arm DNA-binding domain AMD17_RS12120 PF00958 GMP synthase C terminal domain AMD17_RS12120 PF02540 NAD synthase AMD17_RS12120 PF00117 Glutamine amidotransferase class-I AMD17_RS12125 PF00571 CBS domain AMD17_RS12125 PF00478 IMP dehydrogenase / GMP reductase domain AMD17_RS12130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD17_RS12130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD17_RS12140 PF02254 TrkA-N domain AMD17_RS12140 PF00999 Sodium/hydrogen exchanger family AMD17_RS12145 PF00483 Nucleotidyl transferase AMD17_RS12150 PF02719 Polysaccharide biosynthesis protein AMD17_RS12155 PF00953 Glycosyl transferase family 4 AMD17_RS12160 PF18073 Rubredoxin metal binding domain AMD17_RS12170 PF00216 Bacterial DNA-binding protein AMD17_RS12175 PF00575 S1 RNA binding domain AMD17_RS12180 PF02224 Cytidylate kinase AMD17_RS12185 PF00444 Ribosomal protein L36 AMD17_RS12195 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD17_RS12200 PF00795 Carbon-nitrogen hydrolase AMD17_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS12250 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS12260 PF03795 YCII-related domain AMD17_RS12265 PF02616 Segregation and condensation protein ScpA AMD17_RS12270 PF04079 Segregation and condensation complex subunit ScpB AMD17_RS12275 PF01479 S4 domain AMD17_RS12275 PF00849 RNA pseudouridylate synthase AMD17_RS12290 PF00795 Carbon-nitrogen hydrolase AMD17_RS12295 PF00155 Aminotransferase class I and II AMD17_RS12300 PF00005 ABC transporter AMD17_RS12305 PF03379 CcmB protein AMD17_RS12310 PF01578 Cytochrome C assembly protein AMD17_RS12320 PF03100 CcmE AMD17_RS12325 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD17_RS12325 PF01578 Cytochrome C assembly protein AMD17_RS12330 PF08534 Redoxin AMD17_RS12335 PF03918 Cytochrome C biogenesis protein AMD17_RS12345 PF00561 alpha/beta hydrolase fold AMD17_RS12350 PF00313 'Cold-shock' DNA-binding domain AMD17_RS12355 PF00005 ABC transporter AMD17_RS12355 PF00664 ABC transporter transmembrane region AMD17_RS12360 PF00664 ABC transporter transmembrane region AMD17_RS12360 PF00005 ABC transporter AMD17_RS12365 PF01654 Cytochrome bd terminal oxidase subunit I AMD17_RS12370 PF02322 Cytochrome bd terminal oxidase subunit II AMD17_RS12390 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD17_RS12390 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD17_RS12395 PF00171 Aldehyde dehydrogenase family AMD17_RS12400 PF00696 Amino acid kinase family AMD17_RS12400 PF01472 PUA domain AMD17_RS12410 PF00206 Lyase AMD17_RS12415 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD17_RS12425 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AMD17_RS12425 PF00696 Amino acid kinase family AMD17_RS12430 PF01546 Peptidase family M20/M25/M40 AMD17_RS12430 PF07687 Peptidase dimerisation domain AMD17_RS12440 PF00764 Arginosuccinate synthase AMD17_RS12445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD17_RS12445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD17_RS12455 PF01406 tRNA synthetases class I (C) catalytic domain AMD17_RS12455 PF09190 DALR domain AMD17_RS12460 PF02657 Fe-S metabolism associated domain AMD17_RS12470 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD17_RS12480 PF01809 Putative membrane protein insertion efficiency factor AMD17_RS12485 PF01979 Amidohydrolase family AMD17_RS12490 PF08460 Bacterial SH3 domain AMD17_RS12490 PF01551 Peptidase family M23 AMD17_RS12505 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD17_RS12510 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD17_RS12520 PF00753 Metallo-beta-lactamase superfamily AMD17_RS12540 PF01527 Transposase AMD17_RS12545 PF00295 Glycosyl hydrolases family 28 AMD17_RS12555 PF13419 Haloacid dehalogenase-like hydrolase AMD17_RS12565 PF01979 Amidohydrolase family AMD17_RS12575 PF01132 Elongation factor P (EF-P) OB domain AMD17_RS12575 PF09285 Elongation factor P, C-terminal AMD17_RS12575 PF08207 Elongation factor P (EF-P) KOW-like domain AMD17_RS12580 PF04055 Radical SAM superfamily AMD17_RS12585 PF00563 EAL domain AMD17_RS12585 PF13188 PAS domain AMD17_RS12585 PF03707 Bacterial signalling protein N terminal repeat AMD17_RS12585 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS12595 PF00588 SpoU rRNA Methylase family AMD17_RS12600 PF00459 Inositol monophosphatase family AMD17_RS12605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD17_RS12605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD17_RS12610 PF00545 ribonuclease AMD17_RS12620 PF12848 ABC transporter AMD17_RS12620 PF16326 ABC transporter C-terminal domain AMD17_RS12620 PF00005 ABC transporter AMD17_RS12625 PF00270 DEAD/DEAH box helicase AMD17_RS12625 PF00271 Helicase conserved C-terminal domain AMD17_RS12625 PF03880 DbpA RNA binding domain AMD17_RS12630 PF00156 Phosphoribosyl transferase domain AMD17_RS12635 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMD17_RS12640 PF00135 Carboxylesterase family AMD17_RS12645 PF14497 Glutathione S-transferase, C-terminal domain AMD17_RS12645 PF02798 Glutathione S-transferase, N-terminal domain AMD17_RS12650 PF00313 'Cold-shock' DNA-binding domain AMD17_RS12655 PF07152 YaeQ protein AMD17_RS12665 PF00072 Response regulator receiver domain AMD17_RS12665 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS12665 PF00563 EAL domain AMD17_RS12670 PF01435 Peptidase family M48 AMD17_RS12675 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD17_RS12680 PF00106 short chain dehydrogenase AMD17_RS12685 PF05233 PHB accumulation regulatory domain AMD17_RS12685 PF07879 PHB/PHA accumulation regulator DNA-binding domain AMD17_RS12700 PF08676 MutL C terminal dimerisation domain AMD17_RS12700 PF01119 DNA mismatch repair protein, C-terminal domain AMD17_RS12705 PF11741 AMIN domain AMD17_RS12705 PF01520 N-acetylmuramoyl-L-alanine amidase AMD17_RS12710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMD17_RS12715 PF03853 YjeF-related protein N-terminus AMD17_RS12715 PF01256 Carbohydrate kinase AMD17_RS12720 PF08331 Domain of unknown function (DUF1730) AMD17_RS12725 PF02601 Exonuclease VII, large subunit AMD17_RS12725 PF13742 OB-fold nucleic acid binding domain AMD17_RS12735 PF03781 Sulfatase-modifying factor enzyme 1 AMD17_RS12740 PF00570 HRDC domain AMD17_RS12740 PF01612 3'-5' exonuclease AMD17_RS12745 PF01068 ATP dependent DNA ligase domain AMD17_RS12745 PF13298 DNA polymerase Ligase (LigD) AMD17_RS12745 PF04679 ATP dependent DNA ligase C terminal region AMD17_RS12765 PF00589 Phage integrase family AMD17_RS12790 PF05598 Transposase domain (DUF772) AMD17_RS12800 PF01527 Transposase AMD17_RS12820 PF00171 Aldehyde dehydrogenase family AMD17_RS12820 PF01619 Proline dehydrogenase AMD17_RS12820 PF14850 DNA-binding domain of Proline dehydrogenase AMD17_RS12820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD17_RS12830 PF01527 Transposase AMD17_RS12835 PF13333 Integrase core domain AMD17_RS12835 PF13276 HTH-like domain AMD17_RS12835 PF00665 Integrase core domain AMD17_RS12840 PF00239 Resolvase, N terminal domain AMD17_RS12840 PF02796 Helix-turn-helix domain of resolvase AMD17_RS12855 PF02384 N-6 DNA Methylase AMD17_RS12860 PF09572 XamI restriction endonuclease AMD17_RS12915 PF01584 CheW-like domain AMD17_RS12920 PF02743 Cache domain AMD17_RS12920 PF00672 HAMP domain AMD17_RS12920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS12925 PF02245 Methylpurine-DNA glycosylase (MPG) AMD17_RS12930 PF00270 DEAD/DEAH box helicase AMD17_RS12930 PF00271 Helicase conserved C-terminal domain AMD17_RS12930 PF08494 DEAD/H associated AMD17_RS12945 PF04386 Stringent starvation protein B AMD17_RS12950 PF00043 Glutathione S-transferase, C-terminal domain AMD17_RS12950 PF02798 Glutathione S-transferase, N-terminal domain AMD17_RS12955 PF02167 Cytochrome C1 family AMD17_RS12960 PF00032 Cytochrome b(C-terminal)/b6/petD AMD17_RS12960 PF00033 Cytochrome b/b6/petB AMD17_RS12965 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD17_RS12965 PF00355 Rieske [2Fe-2S] domain AMD17_RS12970 PF01464 Transglycosylase SLT domain AMD17_RS12985 PF04055 Radical SAM superfamily AMD17_RS12985 PF00919 Uncharacterized protein family UPF0004 AMD17_RS12985 PF01938 TRAM domain AMD17_RS12990 PF02562 PhoH-like protein AMD17_RS13000 PF02130 Uncharacterized protein family UPF0054 AMD17_RS13010 PF03471 Transporter associated domain AMD17_RS13010 PF00571 CBS domain AMD17_RS13025 PF00171 Aldehyde dehydrogenase family AMD17_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS13040 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS13045 PF08402 TOBE domain AMD17_RS13045 PF00005 ABC transporter AMD17_RS13050 PF02321 Outer membrane efflux protein AMD17_RS13055 PF07690 Major Facilitator Superfamily AMD17_RS13060 PF13533 Biotin-lipoyl like AMD17_RS13065 PF13416 Bacterial extracellular solute-binding protein AMD17_RS13070 PF00202 Aminotransferase class-III AMD17_RS13075 PF00120 Glutamine synthetase, catalytic domain AMD17_RS13080 PF07722 Peptidase C26 AMD17_RS13085 PF00120 Glutamine synthetase, catalytic domain AMD17_RS13090 PF01266 FAD dependent oxidoreductase AMD17_RS13095 PF00072 Response regulator receiver domain AMD17_RS13095 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS13100 PF01814 Hemerythrin HHE cation binding domain AMD17_RS13105 PF07690 Major Facilitator Superfamily AMD17_RS13105 PF00083 Sugar (and other) transporter AMD17_RS13115 PF00384 Molybdopterin oxidoreductase AMD17_RS13120 PF02634 FdhD/NarQ family AMD17_RS13125 PF07690 Major Facilitator Superfamily AMD17_RS13130 PF00202 Aminotransferase class-III AMD17_RS13140 PF04286 Protein of unknown function (DUF445) AMD17_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS13145 PF00672 HAMP domain AMD17_RS13145 PF01627 Hpt domain AMD17_RS13145 PF00072 Response regulator receiver domain AMD17_RS13145 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS13145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD17_RS13150 PF00072 Response regulator receiver domain AMD17_RS13155 PF07690 Major Facilitator Superfamily AMD17_RS13160 PF05088 Bacterial NAD-glutamate dehydrogenase AMD17_RS13170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS13170 PF00529 HlyD membrane-fusion protein of T1SS AMD17_RS13175 PF00873 AcrB/AcrD/AcrF family AMD17_RS13180 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS13185 PF05524 PEP-utilising enzyme, N-terminal AMD17_RS13185 PF00391 PEP-utilising enzyme, mobile domain AMD17_RS13185 PF02896 PEP-utilising enzyme, TIM barrel domain AMD17_RS13185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD17_RS13185 PF00381 PTS HPr component phosphorylation site AMD17_RS13190 PF00294 pfkB family carbohydrate kinase AMD17_RS13195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD17_RS13230 PF02355 Protein export membrane protein AMD17_RS13230 PF07549 SecD/SecF GG Motif AMD17_RS13235 PF07549 SecD/SecF GG Motif AMD17_RS13235 PF02355 Protein export membrane protein AMD17_RS13235 PF13721 SecD export protein N-terminal TM region AMD17_RS13240 PF02699 Preprotein translocase subunit AMD17_RS13245 PF01702 Queuine tRNA-ribosyltransferase AMD17_RS13250 PF02547 Queuosine biosynthesis protein AMD17_RS13295 PF00759 Glycosyl hydrolase family 9 AMD17_RS13295 PF02927 Cellulase N-terminal ig-like domain AMD17_RS13310 PF00037 4Fe-4S binding domain AMD17_RS13325 PF01467 Cytidylyltransferase-like AMD17_RS13335 PF00183 Hsp90 protein AMD17_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS13350 PF00593 TonB dependent receptor AMD17_RS13350 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS13360 PF04616 Glycosyl hydrolases family 43 AMD17_RS13365 PF07532 Bacterial Ig-like domain (group 4) AMD17_RS13370 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS13370 PF00593 TonB dependent receptor AMD17_RS13380 PF09286 Pro-kumamolisin, activation domain AMD17_RS13380 PF00082 Subtilase family AMD17_RS13405 PF13520 Amino acid permease AMD17_RS13420 PF01321 Creatinase/Prolidase N-terminal domain AMD17_RS13420 PF00557 Metallopeptidase family M24 AMD17_RS13425 PF00171 Aldehyde dehydrogenase family AMD17_RS13430 PF00701 Dihydrodipicolinate synthetase family AMD17_RS13435 PF04324 BFD-like [2Fe-2S] binding domain AMD17_RS13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS13445 PF01266 FAD dependent oxidoreductase AMD17_RS13450 PF05544 Proline racemase AMD17_RS13460 PF00448 SRP54-type protein, GTPase domain AMD17_RS13460 PF02881 SRP54-type protein, helical bundle domain AMD17_RS13465 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD17_RS13465 PF00633 Helix-hairpin-helix motif AMD17_RS13465 PF10576 Iron-sulfur binding domain of endonuclease III AMD17_RS13465 PF14815 NUDIX domain AMD17_RS13470 PF04362 Bacterial Fe(2+) trafficking AMD17_RS13475 PF13426 PAS domain AMD17_RS13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS13475 PF00072 Response regulator receiver domain AMD17_RS13505 PF08212 Lipocalin-like domain AMD17_RS13515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD17_RS13515 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMD17_RS13515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD17_RS13515 PF02770 Acyl-CoA dehydrogenase, middle domain AMD17_RS13525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD17_RS13525 PF02779 Transketolase, pyrimidine binding domain AMD17_RS13525 PF02780 Transketolase, C-terminal domain AMD17_RS13545 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD17_RS13550 PF00753 Metallo-beta-lactamase superfamily AMD17_RS13550 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD17_RS13555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD17_RS13555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD17_RS13570 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD17_RS13585 PF14667 Polysaccharide biosynthesis C-terminal domain AMD17_RS13595 PF00534 Glycosyl transferases group 1 AMD17_RS13595 PF13439 Glycosyltransferase Family 4 AMD17_RS13615 PF02397 Bacterial sugar transferase AMD17_RS13635 PF13411 MerR HTH family regulatory protein AMD17_RS13640 PF00216 Bacterial DNA-binding protein AMD17_RS13645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMD17_RS13645 PF03483 B3/4 domain AMD17_RS13645 PF03147 Ferredoxin-fold anticodon binding domain AMD17_RS13645 PF03484 tRNA synthetase B5 domain AMD17_RS13645 PF01588 Putative tRNA binding domain AMD17_RS13650 PF01409 tRNA synthetases class II core domain (F) AMD17_RS13650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD17_RS13655 PF00453 Ribosomal protein L20 AMD17_RS13660 PF01632 Ribosomal protein L35 AMD17_RS13665 PF05198 Translation initiation factor IF-3, N-terminal domain AMD17_RS13665 PF00707 Translation initiation factor IF-3, C-terminal domain AMD17_RS13670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD17_RS13670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD17_RS13670 PF03129 Anticodon binding domain AMD17_RS13670 PF02824 TGS domain AMD17_RS13675 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS13680 PF00686 Starch binding domain AMD17_RS13680 PF00128 Alpha amylase, catalytic domain AMD17_RS13685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD17_RS13695 PF14508 Glycosyl-hydrolase 97 N-terminal AMD17_RS13695 PF10566 Glycoside hydrolase 97 AMD17_RS13695 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD17_RS13710 PF00128 Alpha amylase, catalytic domain AMD17_RS13715 PF01527 Transposase AMD17_RS13755 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AMD17_RS13770 PF01464 Transglycosylase SLT domain AMD17_RS13775 PF00437 Type II/IV secretion system protein AMD17_RS13780 PF03743 Bacterial conjugation TrbI-like protein AMD17_RS13800 PF02534 Type IV secretory system Conjugative DNA transfer AMD17_RS13815 PF00271 Helicase conserved C-terminal domain AMD17_RS13815 PF17757 UvrB interaction domain AMD17_RS13815 PF12344 Ultra-violet resistance protein B AMD17_RS13815 PF02151 UvrB/uvrC motif AMD17_RS13815 PF04851 Type III restriction enzyme, res subunit AMD17_RS13880 PF01555 DNA methylase AMD17_RS13930 PF00182 Chitinase class I AMD17_RS13995 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMD17_RS13995 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS14000 PF05567 Neisseria PilC beta-propeller domain AMD17_RS14025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS14025 PF06580 Histidine kinase AMD17_RS14025 PF07694 5TMR of 5TMR-LYT AMD17_RS14030 PF11892 Domain of unknown function (DUF3412) AMD17_RS14030 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AMD17_RS14030 PF03641 Possible lysine decarboxylase AMD17_RS14035 PF00593 TonB dependent receptor AMD17_RS14040 PF01914 MarC family integral membrane protein AMD17_RS14050 PF00462 Glutaredoxin AMD17_RS14055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD17_RS14055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD17_RS14060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMD17_RS14060 PF02222 ATP-grasp domain AMD17_RS14065 PF00731 AIR carboxylase AMD17_RS14075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD17_RS14075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD17_RS14085 PF03725 3' exoribonuclease family, domain 2 AMD17_RS14085 PF01138 3' exoribonuclease family, domain 1 AMD17_RS14085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD17_RS14085 PF00013 KH domain AMD17_RS14085 PF00575 S1 RNA binding domain AMD17_RS14090 PF00312 Ribosomal protein S15 AMD17_RS14095 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMD17_RS14095 PF09157 Pseudouridine synthase II TruB, C-terminal AMD17_RS14095 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD17_RS14100 PF02033 Ribosome-binding factor A AMD17_RS14105 PF11987 Translation-initiation factor 2 AMD17_RS14105 PF04760 Translation initiation factor IF-2, N-terminal region AMD17_RS14105 PF08364 Bacterial translation initiation factor IF-2 associated region AMD17_RS14105 PF00009 Elongation factor Tu GTP binding domain AMD17_RS14110 PF08529 NusA N-terminal domain AMD17_RS14110 PF00575 S1 RNA binding domain AMD17_RS14110 PF13184 NusA-like KH domain AMD17_RS14115 PF17384 RimP C-terminal SH3 domain AMD17_RS14115 PF02576 RimP N-terminal domain AMD17_RS14125 PF00361 Proton-conducting membrane transporter AMD17_RS14130 PF00361 Proton-conducting membrane transporter AMD17_RS14130 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMD17_RS14135 PF00361 Proton-conducting membrane transporter AMD17_RS14135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD17_RS14140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD17_RS14145 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD17_RS14150 PF12838 4Fe-4S dicluster domain AMD17_RS14155 PF00146 NADH dehydrogenase AMD17_RS14160 PF00384 Molybdopterin oxidoreductase AMD17_RS14160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD17_RS14160 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMD17_RS14165 PF10531 SLBB domain AMD17_RS14165 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD17_RS14165 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD17_RS14175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD17_RS14180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD17_RS14185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD17_RS14190 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD17_RS14205 PF00121 Triosephosphate isomerase AMD17_RS14210 PF00106 short chain dehydrogenase AMD17_RS14225 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS14225 PF03707 Bacterial signalling protein N terminal repeat AMD17_RS14225 PF00563 EAL domain AMD17_RS14245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD17_RS14245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD17_RS14245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD17_RS14245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD17_RS14250 PF01039 Carboxyl transferase domain AMD17_RS14250 PF17848 Acetyl-coA carboxylase zinc finger domain AMD17_RS14255 PF00290 Tryptophan synthase alpha chain AMD17_RS14265 PF00291 Pyridoxal-phosphate dependent enzyme AMD17_RS14270 PF03466 LysR substrate binding domain AMD17_RS14270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS14275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD17_RS14280 PF01416 tRNA pseudouridine synthase AMD17_RS14300 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD17_RS14300 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD17_RS14305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD17_RS14305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD17_RS14310 PF01264 Chorismate synthase AMD17_RS14315 PF05175 Methyltransferase small domain AMD17_RS14320 PF02630 SCO1/SenC AMD17_RS14325 PF02666 Phosphatidylserine decarboxylase AMD17_RS14335 PF05872 Bacterial protein of unknown function (DUF853) AMD17_RS14340 PF00293 NUDIX domain AMD17_RS14355 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD17_RS14355 PF03449 Transcription elongation factor, N-terminal AMD17_RS14360 PF18693 TRAM domain AMD17_RS14360 PF00919 Uncharacterized protein family UPF0004 AMD17_RS14360 PF04055 Radical SAM superfamily AMD17_RS14365 PF01738 Dienelactone hydrolase family AMD17_RS14385 PF00692 dUTPase AMD17_RS14390 PF10609 NUBPL iron-transfer P-loop NTPase AMD17_RS14395 PF00593 TonB dependent receptor AMD17_RS14395 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS14410 PF05649 Peptidase family M13 AMD17_RS14410 PF01431 Peptidase family M13 AMD17_RS14415 PF05649 Peptidase family M13 AMD17_RS14415 PF01431 Peptidase family M13 AMD17_RS14430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD17_RS14435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD17_RS14435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS14440 PF01266 FAD dependent oxidoreductase AMD17_RS14445 PF04235 Protein of unknown function (DUF418) AMD17_RS14450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD17_RS14455 PF00877 NlpC/P60 family AMD17_RS14460 PF00877 NlpC/P60 family AMD17_RS14475 PF00375 Sodium:dicarboxylate symporter family AMD17_RS14480 PF00245 Alkaline phosphatase AMD17_RS14485 PF11734 TilS substrate C-terminal domain AMD17_RS14485 PF01171 PP-loop family AMD17_RS14485 PF09179 TilS substrate binding domain AMD17_RS14490 PF02609 Exonuclease VII small subunit AMD17_RS14495 PF00348 Polyprenyl synthetase AMD17_RS14500 PF14521 Lysine-specific metallo-endopeptidase AMD17_RS14510 PF01523 Putative modulator of DNA gyrase AMD17_RS14515 PF04751 Protein of unknown function (DUF615) AMD17_RS14520 PF01523 Putative modulator of DNA gyrase AMD17_RS14530 PF13502 AsmA-like C-terminal region AMD17_RS14530 PF13116 Protein of unknown function AMD17_RS14535 PF00575 S1 RNA binding domain AMD17_RS14535 PF10150 Ribonuclease E/G family AMD17_RS14540 PF02545 Maf-like protein AMD17_RS14545 PF04402 Protein of unknown function (DUF541) AMD17_RS14560 PF02590 Predicted SPOUT methyltransferase AMD17_RS14575 PF01467 Cytidylyltransferase-like AMD17_RS14590 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD17_RS14590 PF00133 tRNA synthetases class I (I, L, M and V) AMD17_RS14590 PF08264 Anticodon-binding domain of tRNA AMD17_RS14600 PF00085 Thioredoxin AMD17_RS14625 PF04070 Domain of unknown function (DUF378) AMD17_RS14630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD17_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS14640 PF03466 LysR substrate binding domain AMD17_RS14670 PF00664 ABC transporter transmembrane region AMD17_RS14670 PF00005 ABC transporter AMD17_RS14680 PF00873 AcrB/AcrD/AcrF family AMD17_RS14695 PF02321 Outer membrane efflux protein AMD17_RS14700 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS14700 PF00072 Response regulator receiver domain AMD17_RS14705 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS14705 PF00672 HAMP domain AMD17_RS14710 PF00999 Sodium/hydrogen exchanger family AMD17_RS14715 PF00144 Beta-lactamase AMD17_RS14720 PF03737 Aldolase/RraA AMD17_RS14740 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS14745 PF00849 RNA pseudouridylate synthase AMD17_RS14745 PF01479 S4 domain AMD17_RS14750 PF00563 EAL domain AMD17_RS14750 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS14750 PF08448 PAS fold AMD17_RS14755 PF00271 Helicase conserved C-terminal domain AMD17_RS14755 PF00270 DEAD/DEAH box helicase AMD17_RS14755 PF03880 DbpA RNA binding domain AMD17_RS14805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD17_RS14805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD17_RS14815 PF00654 Voltage gated chloride channel AMD17_RS14820 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS14820 PF00107 Zinc-binding dehydrogenase AMD17_RS14835 PF00593 TonB dependent receptor AMD17_RS14835 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS14845 PF00082 Subtilase family AMD17_RS14845 PF01483 Proprotein convertase P-domain AMD17_RS14855 PF00082 Subtilase family AMD17_RS14855 PF01483 Proprotein convertase P-domain AMD17_RS14865 PF00248 Aldo/keto reductase family AMD17_RS14870 PF07690 Major Facilitator Superfamily AMD17_RS14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS14875 PF03466 LysR substrate binding domain AMD17_RS14885 PF06719 AraC-type transcriptional regulator N-terminus AMD17_RS14885 PF12833 Helix-turn-helix domain AMD17_RS14895 PF00440 Bacterial regulatory proteins, tetR family AMD17_RS14895 PF16859 Tetracyclin repressor-like, C-terminal domain AMD17_RS14900 PF02321 Outer membrane efflux protein AMD17_RS14905 PF00873 AcrB/AcrD/AcrF family AMD17_RS14910 PF00529 HlyD membrane-fusion protein of T1SS AMD17_RS14910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS14920 PF01475 Ferric uptake regulator family AMD17_RS14925 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD17_RS14950 PF06123 Inner membrane protein CreD AMD17_RS14960 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS14960 PF00672 HAMP domain AMD17_RS14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS14965 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS14965 PF00072 Response regulator receiver domain AMD17_RS14970 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMD17_RS14980 PF00270 DEAD/DEAH box helicase AMD17_RS14980 PF17757 UvrB interaction domain AMD17_RS14980 PF02559 CarD-like/TRCF domain AMD17_RS14980 PF00271 Helicase conserved C-terminal domain AMD17_RS14980 PF03461 TRCF domain AMD17_RS15015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS15015 PF01584 CheW-like domain AMD17_RS15015 PF09078 CheY binding AMD17_RS15015 PF02895 Signal transducing histidine kinase, homodimeric domain AMD17_RS15015 PF01627 Hpt domain AMD17_RS15020 PF00672 HAMP domain AMD17_RS15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS15020 PF02203 Tar ligand binding domain homologue AMD17_RS15025 PF01584 CheW-like domain AMD17_RS15030 PF13426 PAS domain AMD17_RS15030 PF00563 EAL domain AMD17_RS15030 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS15035 PF01739 CheR methyltransferase, SAM binding domain AMD17_RS15035 PF03705 CheR methyltransferase, all-alpha domain AMD17_RS15040 PF01339 CheB methylesterase AMD17_RS15040 PF00072 Response regulator receiver domain AMD17_RS15045 PF13091 PLD-like domain AMD17_RS15050 PF05649 Peptidase family M13 AMD17_RS15050 PF01431 Peptidase family M13 AMD17_RS15060 PF00300 Histidine phosphatase superfamily (branch 1) AMD17_RS15065 PF04493 Endonuclease V AMD17_RS15075 PF05726 Pirin C-terminal cupin domain AMD17_RS15075 PF02678 Pirin AMD17_RS15090 PF02678 Pirin AMD17_RS15090 PF05726 Pirin C-terminal cupin domain AMD17_RS15095 PF02554 Carbon starvation protein CstA AMD17_RS15095 PF13722 5TM C-terminal transporter carbon starvation CstA AMD17_RS15100 PF04328 Selenoprotein, putative AMD17_RS15145 PF01527 Transposase AMD17_RS15155 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD17_RS15155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD17_RS15160 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD17_RS15160 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD17_RS15165 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD17_RS15165 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD17_RS15165 PF01799 [2Fe-2S] binding domain AMD17_RS15170 PF00698 Acyl transferase domain AMD17_RS15170 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS15170 PF00550 Phosphopantetheine attachment site AMD17_RS15170 PF08659 KR domain AMD17_RS15170 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD17_RS15170 PF14765 Polyketide synthase dehydratase AMD17_RS15170 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD17_RS15170 PF16197 Ketoacyl-synthetase C-terminal extension AMD17_RS15170 PF09277 Erythronolide synthase, docking AMD17_RS15170 PF08990 Erythronolide synthase docking AMD17_RS15175 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS15175 PF00563 EAL domain AMD17_RS15175 PF00360 Phytochrome region AMD17_RS15175 PF01590 GAF domain AMD17_RS15190 PF02384 N-6 DNA Methylase AMD17_RS15190 PF12161 HsdM N-terminal domain AMD17_RS15215 PF00436 Single-strand binding protein family AMD17_RS15220 PF00348 Polyprenyl synthetase AMD17_RS15230 PF08245 Mur ligase middle domain AMD17_RS15230 PF02875 Mur ligase family, glutamate ligase domain AMD17_RS15245 PF01842 ACT domain AMD17_RS15245 PF00696 Amino acid kinase family AMD17_RS15250 PF02567 Phenazine biosynthesis-like protein AMD17_RS15255 PF02567 Phenazine biosynthesis-like protein AMD17_RS15265 PF02566 OsmC-like protein AMD17_RS15270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD17_RS15270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD17_RS15275 PF03652 Holliday junction resolvase AMD17_RS15280 PF02622 Uncharacterized ACR, COG1678 AMD17_RS15290 PF00958 GMP synthase C terminal domain AMD17_RS15290 PF00117 Glutamine amidotransferase class-I AMD17_RS15290 PF03352 Methyladenine glycosylase AMD17_RS15290 PF13302 Acetyltransferase (GNAT) domain AMD17_RS15290 PF13673 Acetyltransferase (GNAT) domain AMD17_RS15300 PF03211 Pectate lyase AMD17_RS15305 PF00437 Type II/IV secretion system protein AMD17_RS15310 PF00437 Type II/IV secretion system protein AMD17_RS15315 PF01168 Alanine racemase, N-terminal domain AMD17_RS15320 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD17_RS15320 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD17_RS15330 PF01551 Peptidase family M23 AMD17_RS15350 PF01965 DJ-1/PfpI family AMD17_RS15360 PF02082 Transcriptional regulator AMD17_RS15365 PF01458 Uncharacterized protein family (UPF0051) AMD17_RS15370 PF00005 ABC transporter AMD17_RS15375 PF01458 Uncharacterized protein family (UPF0051) AMD17_RS15380 PF00266 Aminotransferase class-V AMD17_RS15390 PF00355 Rieske [2Fe-2S] domain AMD17_RS15395 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS15395 PF00593 TonB dependent receptor AMD17_RS15400 PF18331 PKHD-type hydroxylase C-terminal domain AMD17_RS15400 PF13640 2OG-Fe(II) oxygenase superfamily AMD17_RS15425 PF02424 ApbE family AMD17_RS15430 PF00667 FAD binding domain AMD17_RS15430 PF00258 Flavodoxin AMD17_RS15430 PF00175 Oxidoreductase NAD-binding domain AMD17_RS15450 PF01546 Peptidase family M20/M25/M40 AMD17_RS15450 PF07687 Peptidase dimerisation domain AMD17_RS15460 PF01636 Phosphotransferase enzyme family AMD17_RS15465 PF00483 Nucleotidyl transferase AMD17_RS15470 PF00308 Bacterial dnaA protein AMD17_RS15475 PF01594 AI-2E family transporter AMD17_RS15485 PF00586 AIR synthase related protein, N-terminal domain AMD17_RS15485 PF02769 AIR synthase related protein, C-terminal domain AMD17_RS15495 PF00551 Formyl transferase AMD17_RS15515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD17_RS15520 PF01722 BolA-like protein AMD17_RS15525 PF01380 SIS domain AMD17_RS15525 PF00571 CBS domain AMD17_RS15540 PF03968 OstA-like protein AMD17_RS15545 PF00005 ABC transporter AMD17_RS15550 PF04963 Sigma-54 factor, core binding domain AMD17_RS15550 PF04552 Sigma-54, DNA binding domain AMD17_RS15550 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD17_RS15555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD17_RS15560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD17_RS15565 PF07475 HPr Serine kinase C-terminal domain AMD17_RS15565 PF02603 HPr Serine kinase N terminus AMD17_RS15570 PF03668 P-loop ATPase protein family AMD17_RS15580 PF00381 PTS HPr component phosphorylation site AMD17_RS15585 PF00391 PEP-utilising enzyme, mobile domain AMD17_RS15585 PF05524 PEP-utilising enzyme, N-terminal AMD17_RS15585 PF02896 PEP-utilising enzyme, TIM barrel domain AMD17_RS15590 PF03448 MgtE intracellular N domain AMD17_RS15590 PF00571 CBS domain AMD17_RS15590 PF01769 Divalent cation transporter AMD17_RS15595 PF00756 Putative esterase AMD17_RS15600 PF02322 Cytochrome bd terminal oxidase subunit II AMD17_RS15605 PF01654 Cytochrome bd terminal oxidase subunit I AMD17_RS15615 PF00324 Amino acid permease AMD17_RS15620 PF00544 Pectate lyase AMD17_RS15625 PF00561 alpha/beta hydrolase fold AMD17_RS15635 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS15640 PF00324 Amino acid permease AMD17_RS15660 PF12706 Beta-lactamase superfamily domain AMD17_RS15665 PF04820 Tryptophan halogenase AMD17_RS15690 PF09278 MerR, DNA binding AMD17_RS15690 PF00376 MerR family regulatory protein AMD17_RS15695 PF07690 Major Facilitator Superfamily AMD17_RS15705 PF03738 Glutathionylspermidine synthase preATP-grasp AMD17_RS15730 PF04012 PspA/IM30 family AMD17_RS15740 PF01243 Pyridoxamine 5'-phosphate oxidase AMD17_RS15740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD17_RS15745 PF01202 Shikimate kinase AMD17_RS15750 PF01761 3-dehydroquinate synthase AMD17_RS15760 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD17_RS15830 PF00158 Sigma-54 interaction domain AMD17_RS15830 PF02954 Bacterial regulatory protein, Fis family AMD17_RS15830 PF01590 GAF domain AMD17_RS15835 PF07690 Major Facilitator Superfamily AMD17_RS15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS15840 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD17_RS15840 PF00072 Response regulator receiver domain AMD17_RS15840 PF00672 HAMP domain AMD17_RS15840 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS15840 PF01627 Hpt domain AMD17_RS15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS15845 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS15845 PF01627 Hpt domain AMD17_RS15845 PF00072 Response regulator receiver domain AMD17_RS15845 PF00672 HAMP domain AMD17_RS15845 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD17_RS15855 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS15855 PF01627 Hpt domain AMD17_RS15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS15855 PF00072 Response regulator receiver domain AMD17_RS15860 PF04264 YceI-like domain AMD17_RS15880 PF03315 Serine dehydratase beta chain AMD17_RS15880 PF03313 Serine dehydratase alpha chain AMD17_RS15885 PF12697 Alpha/beta hydrolase family AMD17_RS15890 PF00696 Amino acid kinase family AMD17_RS15890 PF03447 Homoserine dehydrogenase, NAD binding domain AMD17_RS15890 PF00742 Homoserine dehydrogenase AMD17_RS15895 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD17_RS15900 PF00561 alpha/beta hydrolase fold AMD17_RS15905 PF01476 LysM domain AMD17_RS15905 PF08525 Opacity-associated protein A N-terminal motif AMD17_RS15905 PF01551 Peptidase family M23 AMD17_RS15910 PF00009 Elongation factor Tu GTP binding domain AMD17_RS15910 PF16658 Class II release factor RF3, C-terminal domain AMD17_RS15915 PF03006 Haemolysin-III related AMD17_RS15920 PF05170 AsmA family AMD17_RS15925 PF00478 IMP dehydrogenase / GMP reductase domain AMD17_RS15925 PF00571 CBS domain AMD17_RS15930 PF00535 Glycosyl transferase family 2 AMD17_RS15935 PF00912 Transglycosylase AMD17_RS15940 PF01430 Hsp33 protein AMD17_RS15950 PF00593 TonB dependent receptor AMD17_RS15950 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS15960 PF00440 Bacterial regulatory proteins, tetR family AMD17_RS15965 PF00561 alpha/beta hydrolase fold AMD17_RS15970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD17_RS15970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD17_RS15970 PF09317 Domain of unknown function (DUF1974) AMD17_RS15995 PF01597 Glycine cleavage H-protein AMD17_RS16000 PF01571 Aminomethyltransferase folate-binding domain AMD17_RS16000 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD17_RS16010 PF01145 SPFH domain / Band 7 family AMD17_RS16010 PF16200 C-terminal region of band_7 AMD17_RS16015 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMD17_RS16020 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD17_RS16025 PF00459 Inositol monophosphatase family AMD17_RS16030 PF00293 NUDIX domain AMD17_RS16035 PF00202 Aminotransferase class-III AMD17_RS16040 PF04452 RNA methyltransferase AMD17_RS16045 PF02685 Glucokinase AMD17_RS16060 PF00704 Glycosyl hydrolases family 18 AMD17_RS16060 PF01476 LysM domain AMD17_RS16065 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD17_RS16065 PF02838 Glycosyl hydrolase family 20, domain 2 AMD17_RS16065 PF07691 PA14 domain AMD17_RS16075 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD17_RS16075 PF07691 PA14 domain AMD17_RS16075 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD17_RS16075 PF14310 Fibronectin type III-like domain AMD17_RS16085 PF01301 Glycosyl hydrolases family 35 AMD17_RS16090 PF13520 Amino acid permease AMD17_RS16100 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD17_RS16100 PF02056 Family 4 glycosyl hydrolase AMD17_RS16110 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD17_RS16110 PF07971 Glycosyl hydrolase family 92 AMD17_RS16115 PF01301 Glycosyl hydrolases family 35 AMD17_RS16145 PF03932 CutC family AMD17_RS16150 PF01112 Asparaginase AMD17_RS16160 PF13302 Acetyltransferase (GNAT) domain AMD17_RS16175 PF01627 Hpt domain AMD17_RS16175 PF01584 CheW-like domain AMD17_RS16175 PF00072 Response regulator receiver domain AMD17_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS16175 PF02895 Signal transducing histidine kinase, homodimeric domain AMD17_RS16180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS16180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMD17_RS16185 PF01584 CheW-like domain AMD17_RS16190 PF00072 Response regulator receiver domain AMD17_RS16195 PF00072 Response regulator receiver domain AMD17_RS16200 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD17_RS16200 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD17_RS16210 PF03747 ADP-ribosylglycohydrolase AMD17_RS16215 PF00814 Glycoprotease family AMD17_RS16220 PF13307 Helicase C-terminal domain AMD17_RS16220 PF04851 Type III restriction enzyme, res subunit AMD17_RS16230 PF00912 Transglycosylase AMD17_RS16230 PF00905 Penicillin binding protein transpeptidase domain AMD17_RS16230 PF14814 Bifunctional transglycosylase second domain AMD17_RS16235 PF00535 Glycosyl transferase family 2 AMD17_RS16245 PF02824 TGS domain AMD17_RS16245 PF04607 Region found in RelA / SpoT proteins AMD17_RS16245 PF13291 ACT domain AMD17_RS16250 PF12706 Beta-lactamase superfamily domain AMD17_RS16255 PF03070 TENA/THI-4/PQQC family AMD17_RS16260 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD17_RS16265 PF13186 Iron-sulfur cluster-binding domain AMD17_RS16265 PF04055 Radical SAM superfamily AMD17_RS16280 PF02685 Glucokinase AMD17_RS16290 PF11898 Domain of unknown function (DUF3418) AMD17_RS16290 PF04408 Helicase associated domain (HA2) AMD17_RS16290 PF00270 DEAD/DEAH box helicase AMD17_RS16290 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD17_RS16290 PF00271 Helicase conserved C-terminal domain AMD17_RS16295 PF00210 Ferritin-like domain AMD17_RS16300 PF09382 RQC domain AMD17_RS16300 PF16124 RecQ zinc-binding AMD17_RS16300 PF00570 HRDC domain AMD17_RS16300 PF00271 Helicase conserved C-terminal domain AMD17_RS16300 PF00270 DEAD/DEAH box helicase AMD17_RS16335 PF00672 HAMP domain AMD17_RS16335 PF02203 Tar ligand binding domain homologue AMD17_RS16335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS16340 PF01810 LysE type translocator AMD17_RS16345 PF03466 LysR substrate binding domain AMD17_RS16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS16355 PF13581 Histidine kinase-like ATPase domain AMD17_RS16355 PF07536 HWE histidine kinase AMD17_RS16355 PF13426 PAS domain AMD17_RS16360 PF06508 Queuosine biosynthesis protein QueC AMD17_RS16370 PF04055 Radical SAM superfamily AMD17_RS16380 PF00691 OmpA family AMD17_RS16385 PF04052 TolB amino-terminal domain AMD17_RS16385 PF07676 WD40-like Beta Propeller Repeat AMD17_RS16395 PF02472 Biopolymer transport protein ExbD/TolR AMD17_RS16400 PF01618 MotA/TolQ/ExbB proton channel family AMD17_RS16405 PF03061 Thioesterase superfamily AMD17_RS16410 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMD17_RS16410 PF17864 RuvB AAA lid domain AMD17_RS16410 PF05491 RuvB C-terminal winged helix domain AMD17_RS16420 PF02705 K+ potassium transporter AMD17_RS16425 PF07499 RuvA, C-terminal domain AMD17_RS16425 PF01330 RuvA N terminal domain AMD17_RS16430 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD17_RS16435 PF01709 Transcriptional regulator AMD17_RS16450 PF02938 GAD domain AMD17_RS16450 PF01336 OB-fold nucleic acid binding domain AMD17_RS16450 PF00152 tRNA synthetases class II (D, K and N) AMD17_RS16465 PF07690 Major Facilitator Superfamily AMD17_RS16490 PF03466 LysR substrate binding domain AMD17_RS16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS16500 PF00005 ABC transporter AMD17_RS16500 PF12848 ABC transporter AMD17_RS16505 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS16505 PF00593 TonB dependent receptor AMD17_RS16520 PF00593 TonB dependent receptor AMD17_RS16520 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS16525 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS16525 PF00593 TonB dependent receptor AMD17_RS16530 PF00067 Cytochrome P450 AMD17_RS16535 PF02254 TrkA-N domain AMD17_RS16535 PF00999 Sodium/hydrogen exchanger family AMD17_RS16560 PF07660 Secretin and TonB N terminus short domain AMD17_RS16560 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS16560 PF00593 TonB dependent receptor AMD17_RS16570 PF06276 Ferric iron reductase FhuF-like transporter AMD17_RS16570 PF04183 IucA / IucC family AMD17_RS16575 PF07690 Major Facilitator Superfamily AMD17_RS16580 PF04183 IucA / IucC family AMD17_RS16580 PF06276 Ferric iron reductase FhuF-like transporter AMD17_RS16585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD17_RS16585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD17_RS16600 PF02654 Cobalamin-5-phosphate synthase AMD17_RS16610 PF02277 Phosphoribosyltransferase AMD17_RS16615 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD17_RS16620 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD17_RS16620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD17_RS16625 PF00155 Aminotransferase class I and II AMD17_RS16630 PF17113 Regulatory signalling modulator protein AmpE AMD17_RS16630 PF03186 CobD/Cbib protein AMD17_RS16635 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD17_RS16635 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD17_RS16650 PF00593 TonB dependent receptor AMD17_RS16650 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS16655 PF07724 AAA domain (Cdc48 subfamily) AMD17_RS16655 PF00004 ATPase family associated with various cellular activities (AAA) AMD17_RS16655 PF17871 AAA lid domain AMD17_RS16655 PF10431 C-terminal, D2-small domain, of ClpB protein AMD17_RS16655 PF02861 Clp amino terminal domain, pathogenicity island component AMD17_RS16660 PF00005 ABC transporter AMD17_RS16665 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS16670 PF09084 NMT1/THI5 like AMD17_RS16675 PF00248 Aldo/keto reductase family AMD17_RS16680 PF00296 Luciferase-like monooxygenase AMD17_RS16685 PF00593 TonB dependent receptor AMD17_RS16685 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS16690 PF01541 GIY-YIG catalytic domain AMD17_RS16725 PF00593 TonB dependent receptor AMD17_RS16725 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS16730 PF02358 Trehalose-phosphatase AMD17_RS16735 PF00723 Glycosyl hydrolases family 15 AMD17_RS16740 PF00982 Glycosyltransferase family 20 AMD17_RS16745 PF01011 PQQ enzyme repeat AMD17_RS16750 PF02203 Tar ligand binding domain homologue AMD17_RS16750 PF00672 HAMP domain AMD17_RS16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS16755 PF04134 Protein of unknown function, DUF393 AMD17_RS16765 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD17_RS16770 PF00849 RNA pseudouridylate synthase AMD17_RS16775 PF13525 Outer membrane lipoprotein AMD17_RS16785 PF02540 NAD synthase AMD17_RS16785 PF00795 Carbon-nitrogen hydrolase AMD17_RS16815 PF13406 Transglycosylase SLT domain AMD17_RS16820 PF01526 Tn3 transposase DDE domain AMD17_RS16820 PF13700 Domain of unknown function (DUF4158) AMD17_RS16840 PF01129 NAD:arginine ADP-ribosyltransferase AMD17_RS16860 PF00549 CoA-ligase AMD17_RS16860 PF02629 CoA binding domain AMD17_RS16865 PF08442 ATP-grasp domain AMD17_RS16865 PF00549 CoA-ligase AMD17_RS16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS16870 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS16875 PF00072 Response regulator receiver domain AMD17_RS16875 PF02954 Bacterial regulatory protein, Fis family AMD17_RS16875 PF00158 Sigma-54 interaction domain AMD17_RS16880 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD17_RS16880 PF00437 Type II/IV secretion system protein AMD17_RS16885 PF00437 Type II/IV secretion system protein AMD17_RS16885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD17_RS16890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD17_RS16890 PF00437 Type II/IV secretion system protein AMD17_RS16895 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS16895 PF00114 Pilin (bacterial filament) AMD17_RS16900 PF00114 Pilin (bacterial filament) AMD17_RS16900 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS16905 PF00482 Type II secretion system (T2SS), protein F AMD17_RS16910 PF06750 Bacterial Peptidase A24 N-terminal domain AMD17_RS16910 PF01478 Type IV leader peptidase family AMD17_RS16915 PF01121 Dephospho-CoA kinase AMD17_RS16935 PF13276 HTH-like domain AMD17_RS16935 PF00665 Integrase core domain AMD17_RS16935 PF13333 Integrase core domain AMD17_RS16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS16940 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS16940 PF00989 PAS fold AMD17_RS16940 PF16736 Single Cache-like AMD17_RS16945 PF00072 Response regulator receiver domain AMD17_RS16945 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS16955 PF18030 RimK PreATP-grasp domain AMD17_RS16955 PF08443 RimK-like ATP-grasp domain AMD17_RS16960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD17_RS16960 PF00128 Alpha amylase, catalytic domain AMD17_RS17015 PF04002 RadC-like JAB domain AMD17_RS17040 PF00072 Response regulator receiver domain AMD17_RS17040 PF13426 PAS domain AMD17_RS17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS17045 PF00072 Response regulator receiver domain AMD17_RS17045 PF13426 PAS domain AMD17_RS17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS17085 PF01527 Transposase AMD17_RS17130 PF00072 Response regulator receiver domain AMD17_RS17130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS17130 PF08448 PAS fold AMD17_RS17130 PF13188 PAS domain AMD17_RS17130 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS17155 PF13676 TIR domain AMD17_RS17170 PF03797 Autotransporter beta-domain AMD17_RS17170 PF00657 GDSL-like Lipase/Acylhydrolase AMD17_RS17180 PF05690 Thiazole biosynthesis protein ThiG AMD17_RS17185 PF02390 Putative methyltransferase AMD17_RS17190 PF02080 TrkA-C domain AMD17_RS17190 PF03600 Citrate transporter AMD17_RS17205 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD17_RS17210 PF01741 Large-conductance mechanosensitive channel, MscL AMD17_RS17225 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS17235 PF00703 Glycosyl hydrolases family 2 AMD17_RS17235 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AMD17_RS17235 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD17_RS17240 PF14508 Glycosyl-hydrolase 97 N-terminal AMD17_RS17240 PF10566 Glycoside hydrolase 97 AMD17_RS17240 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD17_RS17250 PF00135 Carboxylesterase family AMD17_RS17255 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD17_RS17255 PF00588 SpoU rRNA Methylase family AMD17_RS17265 PF11838 ERAP1-like C-terminal domain AMD17_RS17265 PF01433 Peptidase family M1 domain AMD17_RS17315 PF00873 AcrB/AcrD/AcrF family AMD17_RS17320 PF00529 HlyD membrane-fusion protein of T1SS AMD17_RS17320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS17325 PF00009 Elongation factor Tu GTP binding domain AMD17_RS17330 PF01507 Phosphoadenosine phosphosulfate reductase family AMD17_RS17335 PF00258 Flavodoxin AMD17_RS17335 PF00175 Oxidoreductase NAD-binding domain AMD17_RS17335 PF00667 FAD binding domain AMD17_RS17340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD17_RS17340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD17_RS17345 PF01507 Phosphoadenosine phosphosulfate reductase family AMD17_RS17365 PF00072 Response regulator receiver domain AMD17_RS17365 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS17365 PF01627 Hpt domain AMD17_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS17380 PF03466 LysR substrate binding domain AMD17_RS17385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD17_RS17385 PF14824 Sirohaem biosynthesis protein central AMD17_RS17385 PF10414 Sirohaem synthase dimerisation region AMD17_RS17390 PF00291 Pyridoxal-phosphate dependent enzyme AMD17_RS17400 PF01661 Macro domain AMD17_RS17405 PF00274 Fructose-bisphosphate aldolase class-I AMD17_RS17410 PF00224 Pyruvate kinase, barrel domain AMD17_RS17410 PF02887 Pyruvate kinase, alpha/beta domain AMD17_RS17415 PF13419 Haloacid dehalogenase-like hydrolase AMD17_RS17420 PF00162 Phosphoglycerate kinase AMD17_RS17440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD17_RS17440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD17_RS17450 PF03922 OmpW family AMD17_RS17455 PF03922 OmpW family AMD17_RS17465 PF00753 Metallo-beta-lactamase superfamily AMD17_RS17465 PF04273 Putative phosphatase (DUF442) AMD17_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS17480 PF00005 ABC transporter AMD17_RS17480 PF03459 TOBE domain AMD17_RS17515 PF01476 LysM domain AMD17_RS17515 PF03734 L,D-transpeptidase catalytic domain AMD17_RS17520 PF01551 Peptidase family M23 AMD17_RS17520 PF04225 Opacity-associated protein A LysM-like domain AMD17_RS17530 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS17530 PF00593 TonB dependent receptor AMD17_RS17550 PF02779 Transketolase, pyrimidine binding domain AMD17_RS17550 PF00456 Transketolase, thiamine diphosphate binding domain AMD17_RS17550 PF02780 Transketolase, C-terminal domain AMD17_RS17555 PF00375 Sodium:dicarboxylate symporter family AMD17_RS17565 PF00092 von Willebrand factor type A domain AMD17_RS17565 PF07584 Aerotolerance regulator N-terminal AMD17_RS17585 PF07726 ATPase family associated with various cellular activities (AAA) AMD17_RS17585 PF17863 AAA lid domain AMD17_RS17590 PF11741 AMIN domain AMD17_RS17590 PF03958 Bacterial type II/III secretion system short domain AMD17_RS17590 PF00263 Bacterial type II and III secretion system protein AMD17_RS17590 PF07660 Secretin and TonB N terminus short domain AMD17_RS17595 PF04351 Pilus assembly protein, PilP AMD17_RS17600 PF04350 Pilus assembly protein, PilO AMD17_RS17605 PF05137 Fimbrial assembly protein (PilN) AMD17_RS17610 PF11104 Type IV pilus assembly protein PilM; AMD17_RS17615 PF17092 Penicillin-binding protein OB-like domain AMD17_RS17615 PF00912 Transglycosylase AMD17_RS17615 PF00905 Penicillin binding protein transpeptidase domain AMD17_RS17625 PF00285 Citrate synthase, C-terminal domain AMD17_RS17630 PF01197 Ribosomal protein L31 AMD17_RS17635 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD17_RS17640 PF00271 Helicase conserved C-terminal domain AMD17_RS17640 PF00270 DEAD/DEAH box helicase AMD17_RS17640 PF17191 RecG wedge domain AMD17_RS17645 PF01042 Endoribonuclease L-PSP AMD17_RS17650 PF04607 Region found in RelA / SpoT proteins AMD17_RS17650 PF02824 TGS domain AMD17_RS17650 PF13291 ACT domain AMD17_RS17655 PF01192 RNA polymerase Rpb6 AMD17_RS17660 PF00625 Guanylate kinase AMD17_RS17665 PF08340 Domain of unknown function (DUF1732) AMD17_RS17665 PF03755 YicC-like family, N-terminal region AMD17_RS17670 PF03725 3' exoribonuclease family, domain 2 AMD17_RS17670 PF01138 3' exoribonuclease family, domain 1 AMD17_RS17680 PF01725 Ham1 family AMD17_RS17685 PF06969 HemN C-terminal domain AMD17_RS17685 PF04055 Radical SAM superfamily AMD17_RS17700 PF00557 Metallopeptidase family M24 AMD17_RS17710 PF05195 Aminopeptidase P, N-terminal domain AMD17_RS17710 PF00557 Metallopeptidase family M24 AMD17_RS17715 PF03695 Uncharacterised protein family (UPF0149) AMD17_RS17725 PF05164 Cell division protein ZapA AMD17_RS17730 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD17_RS17740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD17_RS17750 PF13369 Transglutaminase-like superfamily AMD17_RS17755 PF00301 Rubredoxin AMD17_RS17760 PF02581 Thiamine monophosphate synthase AMD17_RS17775 PF00202 Aminotransferase class-III AMD17_RS17780 PF17874 MalT-like TPR region AMD17_RS17780 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS17785 PF00127 Copper binding proteins, plastocyanin/azurin family AMD17_RS17790 PF00155 Aminotransferase class I and II AMD17_RS17800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD17_RS17800 PF00034 Cytochrome c AMD17_RS17805 PF01593 Flavin containing amine oxidoreductase AMD17_RS17820 PF00202 Aminotransferase class-III AMD17_RS17825 PF00027 Cyclic nucleotide-binding domain AMD17_RS17825 PF00520 Ion transport protein AMD17_RS17840 PF01569 PAP2 superfamily AMD17_RS17845 PF01062 Bestrophin, RFP-TM, chloride channel AMD17_RS17855 PF08245 Mur ligase middle domain AMD17_RS17855 PF01225 Mur ligase family, catalytic domain AMD17_RS17855 PF02875 Mur ligase family, glutamate ligase domain AMD17_RS17865 PF00365 Phosphofructokinase AMD17_RS17875 PF03030 Inorganic H+ pyrophosphatase AMD17_RS17885 PF00719 Inorganic pyrophosphatase AMD17_RS17895 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS17895 PF00593 TonB dependent receptor AMD17_RS17900 PF12833 Helix-turn-helix domain AMD17_RS17905 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS17905 PF18500 CadC C-terminal domain 1 AMD17_RS17910 PF01964 Radical SAM ThiC family AMD17_RS17910 PF13667 ThiC-associated domain AMD17_RS17915 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS17915 PF00593 TonB dependent receptor AMD17_RS17920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS17920 PF00672 HAMP domain AMD17_RS17930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMD17_RS17930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD17_RS17935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD17_RS17935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD17_RS17935 PF00205 Thiamine pyrophosphate enzyme, central domain AMD17_RS17945 PF00291 Pyridoxal-phosphate dependent enzyme AMD17_RS17950 PF00682 HMGL-like AMD17_RS17950 PF08502 LeuA allosteric (dimerisation) domain AMD17_RS17955 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD17_RS17960 PF00694 Aconitase C-terminal domain AMD17_RS17965 PF00330 Aconitase family (aconitate hydratase) AMD17_RS17970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS17975 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS17990 PF02321 Outer membrane efflux protein AMD17_RS17995 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD17_RS18000 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD17_RS18025 PF01515 Phosphate acetyl/butaryl transferase AMD17_RS18025 PF00390 Malic enzyme, N-terminal domain AMD17_RS18025 PF03949 Malic enzyme, NAD binding domain AMD17_RS18030 PF00375 Sodium:dicarboxylate symporter family AMD17_RS18040 PF02743 Cache domain AMD17_RS18040 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS18040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS18045 PF07690 Major Facilitator Superfamily AMD17_RS18055 PF03466 LysR substrate binding domain AMD17_RS18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS18060 PF00248 Aldo/keto reductase family AMD17_RS18075 PF00072 Response regulator receiver domain AMD17_RS18075 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS18085 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS18085 PF08521 Two-component sensor kinase N-terminal AMD17_RS18090 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS18090 PF00072 Response regulator receiver domain AMD17_RS18100 PF03600 Citrate transporter AMD17_RS18105 PF00106 short chain dehydrogenase AMD17_RS18110 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS18125 PF00128 Alpha amylase, catalytic domain AMD17_RS18140 PF03193 RsgA GTPase AMD17_RS18145 PF00155 Aminotransferase class I and II AMD17_RS18160 PF00593 TonB dependent receptor AMD17_RS18160 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS18165 PF01522 Polysaccharide deacetylase AMD17_RS18170 PF00462 Glutaredoxin AMD17_RS18185 PF01527 Transposase AMD17_RS18205 PF02645 Uncharacterised protein, DegV family COG1307 AMD17_RS18210 PF01327 Polypeptide deformylase AMD17_RS18215 PF03960 ArsC family AMD17_RS18230 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AMD17_RS18235 PF01270 Glycosyl hydrolases family 8 AMD17_RS18240 PF03170 Bacterial cellulose synthase subunit AMD17_RS18245 PF03552 Cellulose synthase AMD17_RS18245 PF00535 Glycosyl transferase family 2 AMD17_RS18245 PF07238 PilZ domain AMD17_RS18260 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMD17_RS18260 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD17_RS18315 PF07702 UTRA domain AMD17_RS18315 PF00392 Bacterial regulatory proteins, gntR family AMD17_RS18325 PF00263 Bacterial type II and III secretion system protein AMD17_RS18325 PF03958 Bacterial type II/III secretion system short domain AMD17_RS18335 PF10741 Type II secretion system (T2SS), protein M subtype b AMD17_RS18340 PF05137 Fimbrial assembly protein (PilN) AMD17_RS18345 PF03934 Type II secretion system (T2SS), protein K AMD17_RS18355 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS18360 PF12019 Type II transport protein GspH AMD17_RS18365 PF08334 Type II secretion system (T2SS), protein G AMD17_RS18370 PF00482 Type II secretion system (T2SS), protein F AMD17_RS18375 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD17_RS18375 PF00437 Type II/IV secretion system protein AMD17_RS18380 PF00082 Subtilase family AMD17_RS18380 PF04151 Bacterial pre-peptidase C-terminal domain AMD17_RS18385 PF03895 YadA-like membrane anchor domain AMD17_RS18385 PF13018 Extended Signal Peptide of Type V secretion system AMD17_RS18385 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD17_RS18385 PF05658 Head domain of trimeric autotransporter adhesin AMD17_RS18390 PF00082 Subtilase family AMD17_RS18390 PF04151 Bacterial pre-peptidase C-terminal domain AMD17_RS18395 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD17_RS18395 PF03895 YadA-like membrane anchor domain AMD17_RS18395 PF05658 Head domain of trimeric autotransporter adhesin AMD17_RS18395 PF13018 Extended Signal Peptide of Type V secretion system AMD17_RS18405 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMD17_RS18405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMD17_RS18405 PF02769 AIR synthase related protein, C-terminal domain AMD17_RS18410 PF10411 Disulfide bond isomerase protein N-terminus AMD17_RS18410 PF13098 Thioredoxin-like domain AMD17_RS18415 PF02899 Phage integrase, N-terminal SAM-like domain AMD17_RS18415 PF00589 Phage integrase family AMD17_RS18430 PF03739 Lipopolysaccharide export system permease LptF/LptG AMD17_RS18440 PF00883 Cytosol aminopeptidase family, catalytic domain AMD17_RS18440 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD17_RS18455 PF08264 Anticodon-binding domain of tRNA AMD17_RS18455 PF00133 tRNA synthetases class I (I, L, M and V) AMD17_RS18455 PF10458 Valyl tRNA synthetase tRNA binding arm AMD17_RS18460 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS18460 PF00593 TonB dependent receptor AMD17_RS18465 PF01464 Transglycosylase SLT domain AMD17_RS18465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AMD17_RS18470 PF00544 Pectate lyase AMD17_RS18485 PF01066 CDP-alcohol phosphatidyltransferase AMD17_RS18495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD17_RS18495 PF03129 Anticodon binding domain AMD17_RS18495 PF04073 Aminoacyl-tRNA editing domain AMD17_RS18500 PF00816 H-NS histone family AMD17_RS18510 PF02405 Permease MlaE AMD17_RS18515 PF00005 ABC transporter AMD17_RS18520 PF02470 MlaD protein AMD17_RS18520 PF03886 ABC-type transport auxiliary lipoprotein component AMD17_RS18540 PF14307 Glycosyltransferase WbsX AMD17_RS18540 PF05045 Rhamnan synthesis protein F AMD17_RS18545 PF01144 Coenzyme A transferase AMD17_RS18550 PF01144 Coenzyme A transferase AMD17_RS18555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD17_RS18555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD17_RS18555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD17_RS18555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD17_RS18560 PF01050 Mannose-6-phosphate isomerase AMD17_RS18560 PF00483 Nucleotidyl transferase AMD17_RS18565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD17_RS18565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD17_RS18565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD17_RS18570 PF04321 RmlD substrate binding domain AMD17_RS18575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD17_RS18580 PF00483 Nucleotidyl transferase AMD17_RS18585 PF16363 GDP-mannose 4,6 dehydratase AMD17_RS18590 PF01012 Electron transfer flavoprotein domain AMD17_RS18595 PF00766 Electron transfer flavoprotein FAD-binding domain AMD17_RS18595 PF01012 Electron transfer flavoprotein domain AMD17_RS18605 PF01040 UbiA prenyltransferase family AMD17_RS18610 PF04030 D-arabinono-1,4-lactone oxidase AMD17_RS18610 PF01565 FAD binding domain AMD17_RS18615 PF00106 short chain dehydrogenase AMD17_RS18625 PF01370 NAD dependent epimerase/dehydratase family AMD17_RS18630 PF01593 Flavin containing amine oxidoreductase AMD17_RS18655 PF00535 Glycosyl transferase family 2 AMD17_RS18665 PF14524 Wzt C-terminal domain AMD17_RS18665 PF00005 ABC transporter AMD17_RS18675 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD17_RS18680 PF00571 CBS domain AMD17_RS18680 PF00291 Pyridoxal-phosphate dependent enzyme AMD17_RS18700 PF00437 Type II/IV secretion system protein AMD17_RS18710 PF02798 Glutathione S-transferase, N-terminal domain AMD17_RS18710 PF14497 Glutathione S-transferase, C-terminal domain AMD17_RS18720 PF00271 Helicase conserved C-terminal domain AMD17_RS18720 PF00270 DEAD/DEAH box helicase AMD17_RS18730 PF00593 TonB dependent receptor AMD17_RS18730 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS18735 PF01242 6-pyruvoyl tetrahydropterin synthase AMD17_RS18755 PF13185 GAF domain AMD17_RS18765 PF00756 Putative esterase AMD17_RS18770 PF00593 TonB dependent receptor AMD17_RS18770 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS18775 PF13419 Haloacid dehalogenase-like hydrolase AMD17_RS18780 PF11799 impB/mucB/samB family C-terminal domain AMD17_RS18780 PF00817 impB/mucB/samB family AMD17_RS18785 PF07977 FabA-like domain AMD17_RS18790 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD17_RS18790 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD17_RS18800 PF01432 Peptidase family M3 AMD17_RS18815 PF07731 Multicopper oxidase AMD17_RS18815 PF00394 Multicopper oxidase AMD17_RS18815 PF07732 Multicopper oxidase AMD17_RS18820 PF05275 Copper resistance protein B precursor (CopB) AMD17_RS18825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD17_RS18850 PF01380 SIS domain AMD17_RS18855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS18860 PF00005 ABC transporter AMD17_RS18860 PF12704 MacB-like periplasmic core domain AMD17_RS18860 PF02687 FtsX-like permease family AMD17_RS18865 PF02687 FtsX-like permease family AMD17_RS18865 PF00005 ABC transporter AMD17_RS18865 PF12704 MacB-like periplasmic core domain AMD17_RS18870 PF12704 MacB-like periplasmic core domain AMD17_RS18870 PF02687 FtsX-like permease family AMD17_RS18880 PF02954 Bacterial regulatory protein, Fis family AMD17_RS18880 PF00158 Sigma-54 interaction domain AMD17_RS18880 PF00072 Response regulator receiver domain AMD17_RS18885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS18885 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS18890 PF14602 Hexapeptide repeat of succinyl-transferase AMD17_RS18890 PF00132 Bacterial transferase hexapeptide (six repeats) AMD17_RS18890 PF12804 MobA-like NTP transferase domain AMD17_RS18905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD17_RS18905 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD17_RS18910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD17_RS18910 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD17_RS18915 PF00231 ATP synthase AMD17_RS18920 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD17_RS18920 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD17_RS18920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD17_RS18925 PF00213 ATP synthase delta (OSCP) subunit AMD17_RS18930 PF00430 ATP synthase B/B' CF(0) AMD17_RS18935 PF00137 ATP synthase subunit C AMD17_RS18940 PF00119 ATP synthase A chain AMD17_RS18960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD17_RS18960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS18970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD17_RS18970 PF00364 Biotin-requiring enzyme AMD17_RS18970 PF02817 e3 binding domain AMD17_RS19010 PF03180 NLPA lipoprotein AMD17_RS19015 PF00528 Binding-protein-dependent transport system inner membrane component AMD17_RS19020 PF00005 ABC transporter AMD17_RS19020 PF09383 NIL domain AMD17_RS19025 PF00892 EamA-like transporter family AMD17_RS19030 PF04461 Protein of unknown function (DUF520) AMD17_RS19040 PF00989 PAS fold AMD17_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS19040 PF01627 Hpt domain AMD17_RS19040 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS19040 PF00072 Response regulator receiver domain AMD17_RS19040 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMD17_RS19065 PF13419 Haloacid dehalogenase-like hydrolase AMD17_RS19070 PF01479 S4 domain AMD17_RS19070 PF00849 RNA pseudouridylate synthase AMD17_RS19075 PF08468 Methyltransferase small domain N-terminal AMD17_RS19075 PF05175 Methyltransferase small domain AMD17_RS19085 PF07995 Glucose / Sorbosone dehydrogenase AMD17_RS19095 PF00989 PAS fold AMD17_RS19095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS19095 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS19115 PF00842 Alanine racemase, C-terminal domain AMD17_RS19115 PF01168 Alanine racemase, N-terminal domain AMD17_RS19120 PF01266 FAD dependent oxidoreductase AMD17_RS19125 PF01037 Lrp/AsnC ligand binding domain AMD17_RS19135 PF01641 SelR domain AMD17_RS19145 PF01618 MotA/TolQ/ExbB proton channel family AMD17_RS19150 PF00691 OmpA family AMD17_RS19150 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD17_RS19175 PF01061 ABC-2 type transporter AMD17_RS19180 PF00005 ABC transporter AMD17_RS19185 PF00999 Sodium/hydrogen exchanger family AMD17_RS19190 PF02469 Fasciclin domain AMD17_RS19195 PF03167 Uracil DNA glycosylase superfamily AMD17_RS19205 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD17_RS19215 PF03466 LysR substrate binding domain AMD17_RS19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS19220 PF03358 NADPH-dependent FMN reductase AMD17_RS19225 PF00248 Aldo/keto reductase family AMD17_RS19235 PF01431 Peptidase family M13 AMD17_RS19235 PF05649 Peptidase family M13 AMD17_RS19255 PF13520 Amino acid permease AMD17_RS19265 PF04397 LytTr DNA-binding domain AMD17_RS19265 PF00072 Response regulator receiver domain AMD17_RS19270 PF02743 Cache domain AMD17_RS19270 PF00672 HAMP domain AMD17_RS19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS19270 PF06580 Histidine kinase AMD17_RS19285 PF05974 Domain of unknown function (DUF892) AMD17_RS19290 PF05067 Manganese containing catalase AMD17_RS19310 PF03705 CheR methyltransferase, all-alpha domain AMD17_RS19310 PF01739 CheR methyltransferase, SAM binding domain AMD17_RS19310 PF08448 PAS fold AMD17_RS19310 PF01339 CheB methylesterase AMD17_RS19325 PF00158 Sigma-54 interaction domain AMD17_RS19325 PF00072 Response regulator receiver domain AMD17_RS19325 PF02954 Bacterial regulatory protein, Fis family AMD17_RS19335 PF01654 Cytochrome bd terminal oxidase subunit I AMD17_RS19340 PF02322 Cytochrome bd terminal oxidase subunit II AMD17_RS19360 PF16363 GDP-mannose 4,6 dehydratase AMD17_RS19370 PF03275 UDP-galactopyranose mutase AMD17_RS19380 PF00664 ABC transporter transmembrane region AMD17_RS19380 PF00005 ABC transporter AMD17_RS19395 PF13823 Alcohol dehydrogenase GroES-associated AMD17_RS19395 PF00107 Zinc-binding dehydrogenase AMD17_RS19395 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS19440 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS19440 PF00593 TonB dependent receptor AMD17_RS19455 PF00005 ABC transporter AMD17_RS19465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS19465 PF03466 LysR substrate binding domain AMD17_RS19470 PF01042 Endoribonuclease L-PSP AMD17_RS19480 PF01527 Transposase AMD17_RS19500 PF02203 Tar ligand binding domain homologue AMD17_RS19500 PF00672 HAMP domain AMD17_RS19500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD17_RS19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS19515 PF03466 LysR substrate binding domain AMD17_RS19520 PF02525 Flavodoxin-like fold AMD17_RS19560 PF00557 Metallopeptidase family M24 AMD17_RS19580 PF04545 Sigma-70, region 4 AMD17_RS19580 PF03979 Sigma-70 factor, region 1.1 AMD17_RS19580 PF04546 Sigma-70, non-essential region AMD17_RS19580 PF04539 Sigma-70 region 3 AMD17_RS19580 PF00140 Sigma-70 factor, region 1.2 AMD17_RS19580 PF04542 Sigma-70 region 2 AMD17_RS19585 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD17_RS19590 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD17_RS19605 PF00925 GTP cyclohydrolase II AMD17_RS19625 PF00535 Glycosyl transferase family 2 AMD17_RS19640 PF01189 16S rRNA methyltransferase RsmB/F AMD17_RS19640 PF01029 NusB family AMD17_RS19645 PF00551 Formyl transferase AMD17_RS19645 PF02911 Formyl transferase, C-terminal domain AMD17_RS19650 PF01327 Polypeptide deformylase AMD17_RS19655 PF01476 LysM domain AMD17_RS19660 PF17782 DprA winged helix domain AMD17_RS19660 PF02481 DNA recombination-mediator protein A AMD17_RS19665 PF04361 Protein of unknown function (DUF494) AMD17_RS19670 PF00114 Pilin (bacterial filament) AMD17_RS19670 PF07963 Prokaryotic N-terminal methylation motif AMD17_RS19680 PF13368 Topoisomerase C-terminal repeat AMD17_RS19680 PF01751 Toprim domain AMD17_RS19680 PF01131 DNA topoisomerase AMD17_RS19685 PF01300 Telomere recombination AMD17_RS19710 PF01343 Peptidase family S49 AMD17_RS19715 PF01554 MatE AMD17_RS19735 PF17764 3′ DNA-binding domain (3′BD) AMD17_RS19735 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMD17_RS19735 PF00271 Helicase conserved C-terminal domain AMD17_RS19735 PF00270 DEAD/DEAH box helicase AMD17_RS19735 PF18074 Primosomal protein N C-terminal domain AMD17_RS19740 PF00043 Glutathione S-transferase, C-terminal domain AMD17_RS19740 PF13417 Glutathione S-transferase, N-terminal domain AMD17_RS19755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD17_RS19760 PF03458 UPF0126 domain AMD17_RS19765 PF04545 Sigma-70, region 4 AMD17_RS19765 PF04542 Sigma-70 region 2 AMD17_RS19770 PF03167 Uracil DNA glycosylase superfamily AMD17_RS19775 PF00072 Response regulator receiver domain AMD17_RS19775 PF01339 CheB methylesterase AMD17_RS19780 PF18075 FtsX extracellular domain AMD17_RS19785 PF00005 ABC transporter AMD17_RS19790 PF00271 Helicase conserved C-terminal domain AMD17_RS19790 PF12300 ATP-dependent RNA helicase RhlB AMD17_RS19790 PF00270 DEAD/DEAH box helicase AMD17_RS19795 PF00085 Thioredoxin AMD17_RS19800 PF07497 Rho termination factor, RNA-binding domain AMD17_RS19800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD17_RS19800 PF07498 Rho termination factor, N-terminal domain AMD17_RS19805 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD17_RS19810 PF03466 LysR substrate binding domain AMD17_RS19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS19820 PF03971 Monomeric isocitrate dehydrogenase AMD17_RS19835 PF09704 CRISPR-associated protein (Cas_Cas5) AMD17_RS19855 PF01867 CRISPR associated protein Cas1 AMD17_RS19860 PF09827 CRISPR associated protein Cas2 AMD17_RS19870 PF01476 LysM domain AMD17_RS19870 PF04972 BON domain AMD17_RS19875 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD17_RS19875 PF14489 QueF-like protein AMD17_RS19880 PF07687 Peptidase dimerisation domain AMD17_RS19880 PF01546 Peptidase family M20/M25/M40 AMD17_RS19885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS19890 PF00873 AcrB/AcrD/AcrF family AMD17_RS19895 PF00873 AcrB/AcrD/AcrF family AMD17_RS19900 PF07063 Domain of unknown function (DUF1338) AMD17_RS19940 PF01427 D-ala-D-ala dipeptidase AMD17_RS19945 PF01510 N-acetylmuramoyl-L-alanine amidase AMD17_RS19955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD17_RS19955 PF13378 Enolase C-terminal domain-like AMD17_RS19965 PF13520 Amino acid permease AMD17_RS19980 PF05360 yiaA/B two helix domain AMD17_RS19985 PF07995 Glucose / Sorbosone dehydrogenase AMD17_RS19990 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD17_RS19990 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD17_RS19990 PF14310 Fibronectin type III-like domain AMD17_RS19995 PF02152 Dihydroneopterin aldolase AMD17_RS20000 PF00814 Glycoprotease family AMD17_RS20005 PF01165 Ribosomal protein S21 AMD17_RS20010 PF09424 Yqey-like protein AMD17_RS20015 PF03631 Virulence factor BrkB AMD17_RS20020 PF10410 DnaB-helicase binding domain of primase AMD17_RS20020 PF08275 DNA primase catalytic core, N-terminal domain AMD17_RS20020 PF01807 CHC2 zinc finger AMD17_RS20020 PF08278 DNA primase DnaG DnaB-binding AMD17_RS20025 PF13593 SBF-like CPA transporter family (DUF4137) AMD17_RS20035 PF01040 UbiA prenyltransferase family AMD17_RS20060 PF00510 Cytochrome c oxidase subunit III AMD17_RS20065 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD17_RS20070 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD17_RS20075 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMD17_RS20075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD17_RS20085 PF00171 Aldehyde dehydrogenase family AMD17_RS20085 PF01619 Proline dehydrogenase AMD17_RS20085 PF14850 DNA-binding domain of Proline dehydrogenase AMD17_RS20085 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD17_RS20120 PF00579 tRNA synthetases class I (W and Y) AMD17_RS20125 PF04225 Opacity-associated protein A LysM-like domain AMD17_RS20125 PF01551 Peptidase family M23 AMD17_RS20130 PF03702 Anhydro-N-acetylmuramic acid kinase AMD17_RS20140 PF07690 Major Facilitator Superfamily AMD17_RS20145 PF03372 Endonuclease/Exonuclease/phosphatase family AMD17_RS20150 PF00156 Phosphoribosyl transferase domain AMD17_RS20160 PF13614 AAA domain AMD17_RS20165 PF02195 ParB-like nuclease domain AMD17_RS20165 PF17762 HTH domain found in ParB protein AMD17_RS20175 PF01370 NAD dependent epimerase/dehydratase family AMD17_RS20180 PF00535 Glycosyl transferase family 2 AMD17_RS20195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD17_RS20195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD17_RS20195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD17_RS20195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD17_RS20200 PF00692 dUTPase AMD17_RS20205 PF02441 Flavoprotein AMD17_RS20205 PF04127 DNA / pantothenate metabolism flavoprotein AMD17_RS20210 PF04002 RadC-like JAB domain AMD17_RS20215 PF00750 tRNA synthetases class I (R) AMD17_RS20215 PF03485 Arginyl tRNA synthetase N terminal domain AMD17_RS20215 PF05746 DALR anticodon binding domain AMD17_RS20230 PF00106 short chain dehydrogenase AMD17_RS20235 PF01757 Acyltransferase family AMD17_RS20240 PF03033 Glycosyltransferase family 28 N-terminal domain AMD17_RS20245 PF00501 AMP-binding enzyme AMD17_RS20245 PF13193 AMP-binding enzyme C-terminal domain AMD17_RS20245 PF00668 Condensation domain AMD17_RS20245 PF00550 Phosphopantetheine attachment site AMD17_RS20245 PF00975 Thioesterase domain AMD17_RS20255 PF17944 Arginine decarboxylase C-terminal helical extension AMD17_RS20255 PF17810 Arginine decarboxylase helical bundle domain AMD17_RS20255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD17_RS20260 PF17284 Spermidine synthase tetramerisation domain AMD17_RS20290 PF00543 Nitrogen regulatory protein P-II AMD17_RS20295 PF04380 Membrane fusogenic activity AMD17_RS20300 PF01078 Magnesium chelatase, subunit ChlI AMD17_RS20300 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMD17_RS20335 PF00580 UvrD/REP helicase N-terminal domain AMD17_RS20335 PF13361 UvrD-like helicase C-terminal domain AMD17_RS20335 PF00570 HRDC domain AMD17_RS20350 PF01527 Transposase AMD17_RS20395 PF01078 Magnesium chelatase, subunit ChlI AMD17_RS20395 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMD17_RS20410 PF00563 EAL domain AMD17_RS20410 PF12792 CSS motif domain associated with EAL AMD17_RS20415 PF00487 Fatty acid desaturase AMD17_RS20420 PF00175 Oxidoreductase NAD-binding domain AMD17_RS20420 PF00970 Oxidoreductase FAD-binding domain AMD17_RS20420 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD17_RS20425 PF00440 Bacterial regulatory proteins, tetR family AMD17_RS20445 PF01139 tRNA-splicing ligase RtcB AMD17_RS20485 PF08338 Domain of unknown function (DUF1731) AMD17_RS20485 PF01370 NAD dependent epimerase/dehydratase family AMD17_RS20490 PF00072 Response regulator receiver domain AMD17_RS20490 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS20495 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS20495 PF08521 Two-component sensor kinase N-terminal AMD17_RS20515 PF00595 PDZ domain AMD17_RS20535 PF01594 AI-2E family transporter AMD17_RS20540 PF13419 Haloacid dehalogenase-like hydrolase AMD17_RS20545 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD17_RS20545 PF00883 Cytosol aminopeptidase family, catalytic domain AMD17_RS20555 PF04542 Sigma-70 region 2 AMD17_RS20555 PF08281 Sigma-70, region 4 AMD17_RS20560 PF00199 Catalase AMD17_RS20575 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS20575 PF00072 Response regulator receiver domain AMD17_RS20580 PF07730 Histidine kinase AMD17_RS20585 PF13533 Biotin-lipoyl like AMD17_RS20590 PF00005 ABC transporter AMD17_RS20615 PF00892 EamA-like transporter family AMD17_RS20630 PF00753 Metallo-beta-lactamase superfamily AMD17_RS20635 PF00579 tRNA synthetases class I (W and Y) AMD17_RS20640 PF05532 CsbD-like AMD17_RS20655 PF00491 Arginase family AMD17_RS20680 PF02223 Thymidylate kinase AMD17_RS20695 PF03309 Type III pantothenate kinase AMD17_RS20700 PF08279 HTH domain AMD17_RS20700 PF03099 Biotin/lipoate A/B protein ligase family AMD17_RS20700 PF02237 Biotin protein ligase C terminal domain AMD17_RS20710 PF06167 Glucose-regulated metallo-peptidase M90 AMD17_RS20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS20730 PF00486 Transcriptional regulatory protein, C terminal AMD17_RS20730 PF00072 Response regulator receiver domain AMD17_RS20740 PF01207 Dihydrouridine synthase (Dus) AMD17_RS20760 PF13307 Helicase C-terminal domain AMD17_RS20760 PF06733 DEAD_2 AMD17_RS20775 PF01488 Shikimate / quinate 5-dehydrogenase AMD17_RS20775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMD17_RS20775 PF08501 Shikimate dehydrogenase substrate binding domain AMD17_RS20785 PF00667 FAD binding domain AMD17_RS20785 PF00258 Flavodoxin AMD17_RS20785 PF00175 Oxidoreductase NAD-binding domain AMD17_RS20795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS20795 PF03466 LysR substrate binding domain AMD17_RS20805 PF00490 Delta-aminolevulinic acid dehydratase AMD17_RS20830 PF00326 Prolyl oligopeptidase family AMD17_RS20830 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD17_RS20835 PF02798 Glutathione S-transferase, N-terminal domain AMD17_RS20835 PF00043 Glutathione S-transferase, C-terminal domain AMD17_RS20860 PF04820 Tryptophan halogenase AMD17_RS20875 PF00005 ABC transporter AMD17_RS20885 PF01381 Helix-turn-helix AMD17_RS20895 PF01229 Glycosyl hydrolases family 39 AMD17_RS20900 PF02583 Metal-sensitive transcriptional repressor AMD17_RS20905 PF01545 Cation efflux family AMD17_RS20905 PF16916 Dimerisation domain of Zinc Transporter AMD17_RS20915 PF07715 TonB-dependent Receptor Plug Domain AMD17_RS20915 PF00593 TonB dependent receptor AMD17_RS20925 PF01965 DJ-1/PfpI family AMD17_RS20925 PF12833 Helix-turn-helix domain AMD17_RS20930 PF00175 Oxidoreductase NAD-binding domain AMD17_RS20930 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD17_RS20930 PF00970 Oxidoreductase FAD-binding domain AMD17_RS20935 PF00005 ABC transporter AMD17_RS20940 PF01061 ABC-2 type transporter AMD17_RS20950 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD17_RS20950 PF02558 Ketopantoate reductase PanE/ApbA AMD17_RS20980 PF00268 Ribonucleotide reductase, small chain AMD17_RS20985 PF02867 Ribonucleotide reductase, barrel domain AMD17_RS20985 PF03477 ATP cone domain AMD17_RS20985 PF00317 Ribonucleotide reductase, all-alpha domain AMD17_RS20995 PF13380 CoA binding domain AMD17_RS20995 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD17_RS20995 PF00583 Acetyltransferase (GNAT) family AMD17_RS21000 PF00571 CBS domain AMD17_RS21000 PF03448 MgtE intracellular N domain AMD17_RS21000 PF01769 Divalent cation transporter AMD17_RS21005 PF00194 Eukaryotic-type carbonic anhydrase AMD17_RS21010 PF00999 Sodium/hydrogen exchanger family AMD17_RS21010 PF02254 TrkA-N domain AMD17_RS21015 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD17_RS21015 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD17_RS21020 PF00723 Glycosyl hydrolases family 15 AMD17_RS21035 PF05166 YcgL domain AMD17_RS21040 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD17_RS21040 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD17_RS21050 PF00535 Glycosyl transferase family 2 AMD17_RS21105 PF07977 FabA-like domain AMD17_RS21110 PF01553 Acyltransferase AMD17_RS21120 PF00550 Phosphopantetheine attachment site AMD17_RS21125 PF04820 Tryptophan halogenase AMD17_RS21145 PF00326 Prolyl oligopeptidase family AMD17_RS21145 PF07676 WD40-like Beta Propeller Repeat AMD17_RS21160 PF01218 Coproporphyrinogen III oxidase AMD17_RS21165 PF00476 DNA polymerase family A AMD17_RS21165 PF01612 3'-5' exonuclease AMD17_RS21165 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD17_RS21165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD17_RS21175 PF06812 ImpA, N-terminal, type VI secretion system AMD17_RS21195 PF03793 PASTA domain AMD17_RS21195 PF00069 Protein kinase domain AMD17_RS21210 PF06761 Intracellular multiplication and human macrophage-killing AMD17_RS21210 PF06744 Type VI secretion protein IcmF C-terminal AMD17_RS21210 PF14331 ImcF-related N-terminal domain AMD17_RS21220 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AMD17_RS21235 PF04717 Type VI secretion system, phage-baseplate injector AMD17_RS21250 PF00069 Protein kinase domain AMD17_RS21250 PF03793 PASTA domain AMD17_RS21260 PF08281 Sigma-70, region 4 AMD17_RS21260 PF04542 Sigma-70 region 2 AMD17_RS21275 PF00328 Histidine phosphatase superfamily (branch 2) AMD17_RS21305 PF00004 ATPase family associated with various cellular activities (AAA) AMD17_RS21305 PF10431 C-terminal, D2-small domain, of ClpB protein AMD17_RS21305 PF07724 AAA domain (Cdc48 subfamily) AMD17_RS21305 PF17871 AAA lid domain AMD17_RS21315 PF05947 Type VI secretion system, TssF AMD17_RS21320 PF04965 Gene 25-like lysozyme AMD17_RS21325 PF07024 ImpE protein AMD17_RS21330 PF05638 Type VI secretion system effector, Hcp AMD17_RS21335 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMD17_RS21340 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AMD17_RS21355 PF12464 Maltose acetyltransferase AMD17_RS21355 PF14602 Hexapeptide repeat of succinyl-transferase AMD17_RS21360 PF00580 UvrD/REP helicase N-terminal domain AMD17_RS21360 PF13361 UvrD-like helicase C-terminal domain AMD17_RS21375 PF13091 PLD-like domain AMD17_RS21375 PF13396 Phospholipase_D-nuclease N-terminal AMD17_RS21380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS21380 PF03466 LysR substrate binding domain AMD17_RS21385 PF03737 Aldolase/RraA AMD17_RS21390 PF04303 PrpF protein AMD17_RS21395 PF04909 Amidohydrolase AMD17_RS21400 PF00471 Ribosomal protein L33 AMD17_RS21405 PF00830 Ribosomal L28 family AMD17_RS21410 PF00873 AcrB/AcrD/AcrF family AMD17_RS21415 PF13533 Biotin-lipoyl like AMD17_RS21435 PF02527 rRNA small subunit methyltransferase G AMD17_RS21440 PF16655 PhoD-like phosphatase, N-terminal domain AMD17_RS21440 PF09423 PhoD-like phosphatase AMD17_RS21445 PF16655 PhoD-like phosphatase, N-terminal domain AMD17_RS21445 PF09423 PhoD-like phosphatase AMD17_RS21450 PF01648 4'-phosphopantetheinyl transferase superfamily AMD17_RS21460 PF04226 Transglycosylase associated protein AMD17_RS21470 PF03372 Endonuclease/Exonuclease/phosphatase family AMD17_RS21475 PF00480 ROK family AMD17_RS21485 PF09312 SurA N-terminal domain AMD17_RS21495 PF00474 Sodium:solute symporter family AMD17_RS21500 PF04341 Protein of unknown function, DUF485 AMD17_RS21510 PF16177 Acetyl-coenzyme A synthetase N-terminus AMD17_RS21510 PF00501 AMP-binding enzyme AMD17_RS21510 PF13193 AMP-binding enzyme C-terminal domain AMD17_RS21515 PF00196 Bacterial regulatory proteins, luxR family AMD17_RS21515 PF00072 Response regulator receiver domain AMD17_RS21540 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD17_RS21540 PF04616 Glycosyl hydrolases family 43 AMD17_RS21550 PF00248 Aldo/keto reductase family AMD17_RS21565 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD17_RS21570 PF13378 Enolase C-terminal domain-like AMD17_RS21570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD17_RS21580 PF05336 L-rhamnose mutarotase AMD17_RS21585 PF07690 Major Facilitator Superfamily AMD17_RS21590 PF01614 Bacterial transcriptional regulator AMD17_RS21590 PF09339 IclR helix-turn-helix domain AMD17_RS21595 PF02659 Putative manganese efflux pump AMD17_RS21600 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS21615 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AMD17_RS21615 PF06165 Glycosyltransferase family 36 AMD17_RS21630 PF13570 PQQ-like domain AMD17_RS21630 PF13360 PQQ-like domain AMD17_RS21630 PF01011 PQQ enzyme repeat AMD17_RS21650 PF04357 TamB, inner membrane protein subunit of TAM complex AMD17_RS21655 PF17243 POTRA domain TamA domain 1 AMD17_RS21655 PF01103 Surface antigen AMD17_RS21685 PF03412 Peptidase C39 family AMD17_RS21685 PF00005 ABC transporter AMD17_RS21685 PF00664 ABC transporter transmembrane region AMD17_RS21690 PF02092 Glycyl-tRNA synthetase beta subunit AMD17_RS21690 PF05746 DALR anticodon binding domain AMD17_RS21695 PF02091 Glycyl-tRNA synthetase alpha subunit AMD17_RS21700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD17_RS21700 PF00437 Type II/IV secretion system protein AMD17_RS21710 PF00958 GMP synthase C terminal domain AMD17_RS21710 PF00117 Glutamine amidotransferase class-I AMD17_RS21720 PF00902 Sec-independent protein translocase protein (TatC) AMD17_RS21725 PF02416 mttA/Hcf106 family AMD17_RS21730 PF02416 mttA/Hcf106 family AMD17_RS21740 PF00762 Ferrochelatase AMD17_RS21745 PF12697 Alpha/beta hydrolase family AMD17_RS21760 PF04381 Putative exonuclease, RdgC AMD17_RS21765 PF01171 PP-loop family AMD17_RS21775 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS21780 PF03648 Glycosyl hydrolase family 67 N-terminus AMD17_RS21780 PF07488 Glycosyl hydrolase family 67 middle domain AMD17_RS21780 PF07477 Glycosyl hydrolase family 67 C-terminus AMD17_RS21790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD17_RS21790 PF13378 Enolase C-terminal domain-like AMD17_RS21795 PF04616 Glycosyl hydrolases family 43 AMD17_RS21795 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD17_RS21800 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD17_RS21800 PF14310 Fibronectin type III-like domain AMD17_RS21800 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD17_RS21800 PF07691 PA14 domain AMD17_RS21805 PF08125 Mannitol dehydrogenase C-terminal domain AMD17_RS21805 PF01232 Mannitol dehydrogenase Rossmann domain AMD17_RS21830 PF00171 Aldehyde dehydrogenase family AMD17_RS21855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD17_RS21855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD17_RS21880 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD17_RS21885 PF00331 Glycosyl hydrolase family 10 AMD17_RS21890 PF00703 Glycosyl hydrolases family 2 AMD17_RS21890 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD17_RS21890 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD17_RS21890 PF16355 Domain of unknown function (DUF4982) AMD17_RS21890 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD17_RS21895 PF02614 Glucuronate isomerase AMD17_RS21900 PF00553 Cellulose binding domain AMD17_RS21900 PF00331 Glycosyl hydrolase family 10 AMD17_RS21900 PF03422 Carbohydrate binding module (family 6) AMD17_RS21915 PF00553 Cellulose binding domain AMD17_RS21915 PF03422 Carbohydrate binding module (family 6) AMD17_RS21915 PF00331 Glycosyl hydrolase family 10 AMD17_RS21935 PF04616 Glycosyl hydrolases family 43 AMD17_RS21970 PF08659 KR domain AMD17_RS21970 PF00550 Phosphopantetheine attachment site AMD17_RS21970 PF16197 Ketoacyl-synthetase C-terminal extension AMD17_RS21970 PF00107 Zinc-binding dehydrogenase AMD17_RS21970 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS21970 PF00698 Acyl transferase domain AMD17_RS21970 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD17_RS21970 PF14765 Polyketide synthase dehydratase AMD17_RS21970 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD17_RS21975 PF01553 Acyltransferase AMD17_RS21985 PF00356 Bacterial regulatory proteins, lacI family AMD17_RS22005 PF04820 Tryptophan halogenase AMD17_RS22010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD17_RS22015 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD17_RS22020 PF04337 Protein of unknown function, DUF480 AMD17_RS22035 PF00580 UvrD/REP helicase N-terminal domain AMD17_RS22035 PF13361 UvrD-like helicase C-terminal domain AMD17_RS22040 PF00265 Thymidine kinase AMD17_RS22045 PF00360 Phytochrome region AMD17_RS22045 PF00512 His Kinase A (phospho-acceptor) domain AMD17_RS22045 PF01590 GAF domain AMD17_RS22045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD17_RS22045 PF08446 PAS fold AMD17_RS22050 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD17_RS22060 PF06827 Zinc finger found in FPG and IleRS AMD17_RS22060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD17_RS22060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD17_RS22095 PF03594 Benzoate membrane transport protein AMD17_RS22100 PF01590 GAF domain AMD17_RS22100 PF08446 PAS fold AMD17_RS22100 PF13426 PAS domain AMD17_RS22100 PF00360 Phytochrome region AMD17_RS22105 PF01126 Heme oxygenase AMD17_RS22110 PF07690 Major Facilitator Superfamily AMD17_RS22115 PF01263 Aldose 1-epimerase AMD17_RS22125 PF02810 SEC-C motif AMD17_RS22130 PF01925 Sulfite exporter TauE/SafE AMD17_RS22150 PF01227 GTP cyclohydrolase I AMD17_RS22160 PF07869 Protein of unknown function (DUF1656) AMD17_RS22165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD17_RS22165 PF00529 HlyD membrane-fusion protein of T1SS AMD17_RS22170 PF02321 Outer membrane efflux protein AMD17_RS22175 PF04632 Fusaric acid resistance protein family AMD17_RS22180 PF00083 Sugar (and other) transporter AMD17_RS22185 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD17_RS22190 PF13396 Phospholipase_D-nuclease N-terminal AMD17_RS22190 PF13091 PLD-like domain AMD17_RS22215 PF01850 PIN domain AMD17_RS22240 PF00849 RNA pseudouridylate synthase AMD17_RS22275 PF00289 Biotin carboxylase, N-terminal domain AMD17_RS22275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD17_RS22275 PF02785 Biotin carboxylase C-terminal domain AMD17_RS22280 PF01425 Amidase AMD17_RS22310 PF13538 UvrD-like helicase C-terminal domain AMD17_RS22315 PF12705 PD-(D/E)XK nuclease superfamily AMD17_RS22315 PF13361 UvrD-like helicase C-terminal domain AMD17_RS22315 PF00580 UvrD/REP helicase N-terminal domain AMD17_RS22320 PF17946 RecC C-terminal domain AMD17_RS22335 PF00005 ABC transporter AMD17_RS22340 PF02405 Permease MlaE AMD17_RS22345 PF02470 MlaD protein AMD17_RS22350 PF05494 MlaC protein AMD17_RS22360 PF04333 MlaA lipoprotein AMD17_RS22370 PF00255 Glutathione peroxidase AMD17_RS22380 PF02646 RmuC family AMD17_RS22385 PF00107 Zinc-binding dehydrogenase AMD17_RS22385 PF08240 Alcohol dehydrogenase GroES-like domain AMD17_RS22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD17_RS22390 PF03466 LysR substrate binding domain AMD17_RS22400 PF13417 Glutathione S-transferase, N-terminal domain AMD17_RS22400 PF00043 Glutathione S-transferase, C-terminal domain AMD17_RS22410 PF13520 Amino acid permease AMD17_RS22415 PF07971 Glycosyl hydrolase family 92 AMD17_RS22415 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD17_RS22420 PF10947 Protein of unknown function (DUF2628) AMD17_RS22425 PF00990 Diguanylate cyclase, GGDEF domain AMD17_RS22430 PF13556 PucR C-terminal helix-turn-helix domain AMD17_RS22430 PF05651 Putative sugar diacid recognition AMD17_RS22430 PF17853 GGDEF-like domain AMD17_RS22435 PF02595 Glycerate kinase family AMD17_RS22440 PF07690 Major Facilitator Superfamily AMD17_RS22455 PF10672 S-adenosylmethionine-dependent methyltransferase AMD17_RS22455 PF17785 PUA-like domain AMD17_RS22460 PF03741 Integral membrane protein TerC family AMD17_RS22465 PF01694 Rhomboid family AMD17_RS22470 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD17_RS22480 PF01569 PAP2 superfamily AMD17_RS22485 PF10396 GTP-binding protein TrmE N-terminus AMD17_RS22485 PF12631 MnmE helical domain AMD17_RS22485 PF01926 50S ribosome-binding GTPase AMD17_RS22490 PF01522 Polysaccharide deacetylase AMD17_RS22500 PF02096 60Kd inner membrane protein AMD17_RS22500 PF14849 YidC periplasmic domain AMD17_RS22505 PF00825 Ribonuclease P AMD17_RS22510 PF00468 Ribosomal protein L34