AMD09_RS00590	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AMD09_RS00605	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AMD09_RS00610	PWY-7247	β-D-glucuronide and D-glucuronate degradation
AMD09_RS00610	PWY-7248	pectin degradation III
AMD09_RS00615	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS00620	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AMD09_RS00640	PWY-4261	glycerol degradation I
AMD09_RS00690	PWY-6531	mannitol cycle
AMD09_RS00705	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS00705	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS00705	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS00705	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS00705	PWY-5723	Rubisco shunt
AMD09_RS00705	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS00705	PWY-6886	1-butanol autotrophic biosynthesis
AMD09_RS00705	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS00705	PWY-7003	glycerol degradation to butanol
AMD09_RS00705	PWY-7124	ethylene biosynthesis V (engineered)
AMD09_RS00705	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMD09_RS00710	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS00845	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS00845	PWY-6416	quinate degradation II
AMD09_RS00845	PWY-6707	gallate biosynthesis
AMD09_RS00860	PWY-5530	sorbitol biosynthesis II
AMD09_RS00860	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS00915	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS00915	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS00915	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS00915	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS00915	PWY-5723	Rubisco shunt
AMD09_RS00915	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS00915	PWY-6886	1-butanol autotrophic biosynthesis
AMD09_RS00915	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS00915	PWY-7003	glycerol degradation to butanol
AMD09_RS00915	PWY-7124	ethylene biosynthesis V (engineered)
AMD09_RS00915	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMD09_RS00975	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMD09_RS00975	PWY-7118	chitin degradation to ethanol
AMD09_RS01020	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMD09_RS01035	PWY-6012	acyl carrier protein metabolism I
AMD09_RS01035	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AMD09_RS01100	PWY-7701	AMD09_RS01100
AMD09_RS01325	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMD09_RS01325	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMD09_RS01375	PWY-5667	CDP-diacylglycerol biosynthesis I
AMD09_RS01375	PWY-5981	CDP-diacylglycerol biosynthesis III
AMD09_RS01375	PWY-6453	stigma estolide biosynthesis
AMD09_RS01375	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMD09_RS01375	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AMD09_RS01375	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMD09_RS01375	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AMD09_RS01380	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMD09_RS01380	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMD09_RS01380	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMD09_RS01380	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMD09_RS01380	PWY-6113	superpathway of mycolate biosynthesis
AMD09_RS01380	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMD09_RS01380	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS01380	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS01380	PWY-7663	gondoate biosynthesis (anaerobic)
AMD09_RS01380	PWY-7664	oleate biosynthesis IV (anaerobic)
AMD09_RS01380	PWYG-321	mycolate biosynthesis
AMD09_RS01465	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMD09_RS01475	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMD09_RS01475	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS01475	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMD09_RS01475	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMD09_RS01485	PWY-5392	reductive TCA cycle II
AMD09_RS01485	PWY-5537	pyruvate fermentation to acetate V
AMD09_RS01485	PWY-5538	pyruvate fermentation to acetate VI
AMD09_RS01485	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS01485	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS01485	PWY-6728	methylaspartate cycle
AMD09_RS01485	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS01485	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMD09_RS01495	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMD09_RS01495	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS01495	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMD09_RS01495	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMD09_RS01495	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS01495	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS01495	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS01495	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMD09_RS01500	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMD09_RS01500	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS01500	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMD09_RS01500	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMD09_RS01500	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS01500	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS01500	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS01500	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMD09_RS01530	PWY-6654	phosphopantothenate biosynthesis III
AMD09_RS01675	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMD09_RS01675	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMD09_RS01705	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS01785	PWY-3961	phosphopantothenate biosynthesis II
AMD09_RS01800	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMD09_RS01800	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS01800	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS01800	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMD09_RS01800	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMD09_RS01800	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMD09_RS01825	PWY-31	canavanine degradation
AMD09_RS01825	PWY-4984	urea cycle
AMD09_RS01825	PWY-6305	putrescine biosynthesis IV
AMD09_RS01825	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMD09_RS02100	PWY-6902	chitin degradation II
AMD09_RS02100	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
AMD09_RS02130	PWY-40	putrescine biosynthesis I
AMD09_RS02130	PWY-43	putrescine biosynthesis II
AMD09_RS02130	PWY-6305	putrescine biosynthesis IV
AMD09_RS02130	PWY-6834	spermidine biosynthesis III
AMD09_RS02145	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS02145	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMD09_RS02145	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMD09_RS02145	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS02185	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMD09_RS02185	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS02185	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS02185	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMD09_RS02190	PWY-6749	CMP-legionaminate biosynthesis I
AMD09_RS02200	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMD09_RS02200	PWY-622	starch biosynthesis
AMD09_RS02235	PWY-5686	UMP biosynthesis
AMD09_RS02315	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMD09_RS02345	PWY-5686	UMP biosynthesis
AMD09_RS02380	PWY-5667	CDP-diacylglycerol biosynthesis I
AMD09_RS02380	PWY-6453	stigma estolide biosynthesis
AMD09_RS02380	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMD09_RS02380	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMD09_RS02475	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AMD09_RS02485	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMD09_RS02485	PWY-622	starch biosynthesis
AMD09_RS02885	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS02890	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS02890	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AMD09_RS02890	PWY-6638	sulfolactate degradation III
AMD09_RS02890	PWY-6642	(<i>R</i>)-cysteate degradation
AMD09_RS02890	PWY-6643	coenzyme M biosynthesis II
AMD09_RS02890	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMD09_RS02890	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMD09_RS02890	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMD09_RS02980	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMD09_RS02980	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMD09_RS02980	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMD09_RS02980	PWY-6113	superpathway of mycolate biosynthesis
AMD09_RS02980	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMD09_RS02980	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS02980	PWY-7663	gondoate biosynthesis (anaerobic)
AMD09_RS02980	PWY-7664	oleate biosynthesis IV (anaerobic)
AMD09_RS02980	PWYG-321	mycolate biosynthesis
AMD09_RS03060	PWY-2622	trehalose biosynthesis IV
AMD09_RS03065	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMD09_RS03065	PWY-622	starch biosynthesis
AMD09_RS03120	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMD09_RS03125	PWY-5515	L-arabinose degradation II
AMD09_RS03125	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMD09_RS03125	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMD09_RS03150	PWY-6134	L-tyrosine biosynthesis IV
AMD09_RS03150	PWY-7158	L-phenylalanine degradation V
AMD09_RS03205	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMD09_RS03310	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMD09_RS03315	PWY-381	nitrate reduction II (assimilatory)
AMD09_RS03315	PWY-5675	nitrate reduction V (assimilatory)
AMD09_RS03315	PWY-6549	L-glutamine biosynthesis III
AMD09_RS03315	PWY-6963	ammonia assimilation cycle I
AMD09_RS03315	PWY-6964	ammonia assimilation cycle II
AMD09_RS03340	PWY-6854	ethylene biosynthesis III (microbes)
AMD09_RS03345	PWY-6854	ethylene biosynthesis III (microbes)
AMD09_RS03375	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMD09_RS03375	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMD09_RS03405	PWY-5667	CDP-diacylglycerol biosynthesis I
AMD09_RS03405	PWY-5981	CDP-diacylglycerol biosynthesis III
AMD09_RS03445	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMD09_RS03460	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS03500	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS03500	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS03585	PWY-6728	methylaspartate cycle
AMD09_RS03585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS03585	PWY-7118	chitin degradation to ethanol
AMD09_RS03585	PWY-7294	xylose degradation IV
AMD09_RS03585	PWY-7295	L-arabinose degradation IV
AMD09_RS03625	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS03625	PWY-5743	3-hydroxypropanoate cycle
AMD09_RS03625	PWY-5744	glyoxylate assimilation
AMD09_RS03625	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMD09_RS03625	PWY-6679	jadomycin biosynthesis
AMD09_RS03625	PWY-6722	candicidin biosynthesis
AMD09_RS03625	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS03795	PWY-5691	urate degradation to allantoin I
AMD09_RS03795	PWY-7394	urate degradation to allantoin II
AMD09_RS03805	PWY-5691	urate degradation to allantoin I
AMD09_RS03805	PWY-7394	urate degradation to allantoin II
AMD09_RS03820	PWY-6832	2-aminoethylphosphonate degradation II
AMD09_RS03845	PWY-4041	&gamma;-glutamyl cycle
AMD09_RS03845	PWY-5826	hypoglycin biosynthesis
AMD09_RS03850	PWY-5169	cyanurate degradation
AMD09_RS03850	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMD09_RS03945	PWY-2201	folate transformations I
AMD09_RS03945	PWY-5497	purine nucleobases degradation II (anaerobic)
AMD09_RS03980	PWY-2201	folate transformations I
AMD09_RS03980	PWY-3841	folate transformations II
AMD09_RS03995	PWY-7723	AMD09_RS03995
AMD09_RS04005	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMD09_RS04005	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMD09_RS04005	PWY-6936	seleno-amino acid biosynthesis
AMD09_RS04005	PWY-702	L-methionine biosynthesis II
AMD09_RS04065	PWY-5101	L-isoleucine biosynthesis II
AMD09_RS04065	PWY-5103	L-isoleucine biosynthesis III
AMD09_RS04065	PWY-5104	L-isoleucine biosynthesis IV
AMD09_RS04065	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMD09_RS04140	PWY-4261	glycerol degradation I
AMD09_RS04150	PWY-4261	glycerol degradation I
AMD09_RS04150	PWY-6118	glycerol-3-phosphate shuttle
AMD09_RS04150	PWY-6952	glycerophosphodiester degradation
AMD09_RS04180	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMD09_RS04180	PWY-2361	3-oxoadipate degradation
AMD09_RS04180	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AMD09_RS04195	PWY-6123	inosine-5'-phosphate biosynthesis I
AMD09_RS04195	PWY-6124	inosine-5'-phosphate biosynthesis II
AMD09_RS04195	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS04195	PWY-7234	inosine-5'-phosphate biosynthesis III
AMD09_RS04200	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AMD09_RS04265	PWY-2201	folate transformations I
AMD09_RS04265	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS04275	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS04285	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS04285	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AMD09_RS04285	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AMD09_RS04290	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMD09_RS04405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS04470	PWY-622	starch biosynthesis
AMD09_RS04475	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMD09_RS04475	PWY-622	starch biosynthesis
AMD09_RS04480	PWY-2661	trehalose biosynthesis V
AMD09_RS04480	PWY-6902	chitin degradation II
AMD09_RS04485	PWY-5941	glycogen degradation II (eukaryotic)
AMD09_RS04485	PWY-6724	starch degradation II
AMD09_RS04485	PWY-6737	starch degradation V
AMD09_RS04485	PWY-7238	sucrose biosynthesis II
AMD09_RS04490	PWY-2661	trehalose biosynthesis V
AMD09_RS04675	PWY-6902	chitin degradation II
AMD09_RS04695	PWY-6123	inosine-5'-phosphate biosynthesis I
AMD09_RS04695	PWY-6124	inosine-5'-phosphate biosynthesis II
AMD09_RS04695	PWY-7234	inosine-5'-phosphate biosynthesis III
AMD09_RS04710	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMD09_RS04710	PWY-5723	Rubisco shunt
AMD09_RS04725	PWY-5958	acridone alkaloid biosynthesis
AMD09_RS04725	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMD09_RS04725	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMD09_RS04735	PWY-5958	acridone alkaloid biosynthesis
AMD09_RS04735	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMD09_RS04735	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMD09_RS04765	PWY-6834	spermidine biosynthesis III
AMD09_RS04850	PWY-6857	retinol biosynthesis
AMD09_RS04855	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS04905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMD09_RS04905	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMD09_RS04905	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMD09_RS04915	PWY-6123	inosine-5'-phosphate biosynthesis I
AMD09_RS04915	PWY-6124	inosine-5'-phosphate biosynthesis II
AMD09_RS04915	PWY-7234	inosine-5'-phosphate biosynthesis III
AMD09_RS05020	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS05020	PWY-6416	quinate degradation II
AMD09_RS05020	PWY-6707	gallate biosynthesis
AMD09_RS05085	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMD09_RS05085	PWY-6164	3-dehydroquinate biosynthesis I
AMD09_RS05085	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMD09_RS05165	PWY-5794	malonate degradation I (biotin-independent)
AMD09_RS05165	PWY-6060	malonate degradation II (biotin-dependent)
AMD09_RS05175	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS05175	PWY-5743	3-hydroxypropanoate cycle
AMD09_RS05175	PWY-5744	glyoxylate assimilation
AMD09_RS05175	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMD09_RS05175	PWY-6060	malonate degradation II (biotin-dependent)
AMD09_RS05175	PWY-6679	jadomycin biosynthesis
AMD09_RS05175	PWY-6722	candicidin biosynthesis
AMD09_RS05175	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS05180	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS05180	PWY-5743	3-hydroxypropanoate cycle
AMD09_RS05180	PWY-5744	glyoxylate assimilation
AMD09_RS05180	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMD09_RS05180	PWY-6060	malonate degradation II (biotin-dependent)
AMD09_RS05180	PWY-6679	jadomycin biosynthesis
AMD09_RS05180	PWY-6722	candicidin biosynthesis
AMD09_RS05180	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS05185	PWY-5796	malonate decarboxylase activation
AMD09_RS05190	PWY-5796	malonate decarboxylase activation
AMD09_RS05245	PWY-6891	thiazole biosynthesis II (Bacillus)
AMD09_RS05245	PWY-6892	thiazole biosynthesis I (E. coli)
AMD09_RS05245	PWY-7560	methylerythritol phosphate pathway II
AMD09_RS05290	PWY-4061	glutathione-mediated detoxification I
AMD09_RS05290	PWY-6842	glutathione-mediated detoxification II
AMD09_RS05290	PWY-7112	4-hydroxy-2-nonenal detoxification
AMD09_RS05290	PWY-7533	gliotoxin biosynthesis
AMD09_RS05365	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS05420	PWY-6891	thiazole biosynthesis II (Bacillus)
AMD09_RS05420	PWY-6892	thiazole biosynthesis I (E. coli)
AMD09_RS05720	PWY-5392	reductive TCA cycle II
AMD09_RS05720	PWY-5537	pyruvate fermentation to acetate V
AMD09_RS05720	PWY-5538	pyruvate fermentation to acetate VI
AMD09_RS05720	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS05720	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS05720	PWY-6728	methylaspartate cycle
AMD09_RS05720	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS05720	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMD09_RS05725	PWY-5392	reductive TCA cycle II
AMD09_RS05725	PWY-5537	pyruvate fermentation to acetate V
AMD09_RS05725	PWY-5538	pyruvate fermentation to acetate VI
AMD09_RS05725	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS05725	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS05725	PWY-6728	methylaspartate cycle
AMD09_RS05725	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS05725	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMD09_RS06125	PWY-5386	methylglyoxal degradation I
AMD09_RS06165	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AMD09_RS06165	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AMD09_RS06175	PWY-6823	molybdenum cofactor biosynthesis
AMD09_RS06195	PWY-6823	molybdenum cofactor biosynthesis
AMD09_RS06315	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS06325	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS06325	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMD09_RS06325	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS06330	PWY-5367	petroselinate biosynthesis
AMD09_RS06330	PWY-5515	L-arabinose degradation II
AMD09_RS06330	PWY-5525	D-glucuronate degradation I
AMD09_RS06330	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMD09_RS06330	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMD09_RS06330	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMD09_RS06330	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMD09_RS06330	PWY-6113	superpathway of mycolate biosynthesis
AMD09_RS06330	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMD09_RS06330	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS06330	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS06330	PWY-7663	gondoate biosynthesis (anaerobic)
AMD09_RS06330	PWY-7664	oleate biosynthesis IV (anaerobic)
AMD09_RS06330	PWYG-321	mycolate biosynthesis
AMD09_RS06345	PWY-5958	acridone alkaloid biosynthesis
AMD09_RS06345	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMD09_RS06345	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMD09_RS06380	PWY-5747	2-methylcitrate cycle II
AMD09_RS06475	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS06820	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMD09_RS07085	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMD09_RS07170	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS07170	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMD09_RS07185	PWY-6825	phosphatidylcholine biosynthesis V
AMD09_RS07265	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMD09_RS07265	PWY-5491	diethylphosphate degradation
AMD09_RS07360	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS07420	PWY-5669	phosphatidylethanolamine biosynthesis I
AMD09_RS07435	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS07445	PWY-2941	L-lysine biosynthesis II
AMD09_RS07445	PWY-2942	L-lysine biosynthesis III
AMD09_RS07445	PWY-5097	L-lysine biosynthesis VI
AMD09_RS07445	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMD09_RS07445	PWY-6559	spermidine biosynthesis II
AMD09_RS07445	PWY-6562	norspermidine biosynthesis
AMD09_RS07445	PWY-7153	grixazone biosynthesis
AMD09_RS07445	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMD09_RS07495	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS07495	PWY-5743	3-hydroxypropanoate cycle
AMD09_RS07495	PWY-5744	glyoxylate assimilation
AMD09_RS07495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMD09_RS07495	PWY-6679	jadomycin biosynthesis
AMD09_RS07495	PWY-6722	candicidin biosynthesis
AMD09_RS07495	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS07500	PWY-6749	CMP-legionaminate biosynthesis I
AMD09_RS07540	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS07540	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS07540	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS07540	PWY-7003	glycerol degradation to butanol
AMD09_RS07670	PWY-5316	nicotine biosynthesis
AMD09_RS07670	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS07670	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMD09_RS07670	PWY-7342	superpathway of nicotine biosynthesis
AMD09_RS07680	PWY-6123	inosine-5'-phosphate biosynthesis I
AMD09_RS07680	PWY-7234	inosine-5'-phosphate biosynthesis III
AMD09_RS07690	PWY-6854	ethylene biosynthesis III (microbes)
AMD09_RS07900	PWY-5194	siroheme biosynthesis
AMD09_RS07900	PWY-5441	S-methyl-L-methionine cycle
AMD09_RS07900	PWY-702	L-methionine biosynthesis II
AMD09_RS07900	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMD09_RS08110	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AMD09_RS08160	PWY-7158	L-phenylalanine degradation V
AMD09_RS08710	PWY-5269	cardiolipin biosynthesis II
AMD09_RS08710	PWY-5668	cardiolipin biosynthesis I
AMD09_RS08730	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMD09_RS08785	PWY-3781	aerobic respiration I (cytochrome c)
AMD09_RS08785	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMD09_RS08785	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMD09_RS08785	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS08785	PWY-6728	methylaspartate cycle
AMD09_RS08785	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS08785	PWY-7254	TCA cycle VII (acetate-producers)
AMD09_RS08785	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMD09_RS08795	PWY-3781	aerobic respiration I (cytochrome c)
AMD09_RS08795	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMD09_RS08795	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMD09_RS08795	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS08795	PWY-6728	methylaspartate cycle
AMD09_RS08795	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS08795	PWY-7254	TCA cycle VII (acetate-producers)
AMD09_RS08795	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMD09_RS08820	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMD09_RS08825	PWY-2722	trehalose degradation IV
AMD09_RS08825	PWY-2723	trehalose degradation V
AMD09_RS08825	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMD09_RS08825	PWY-5661	GDP-glucose biosynthesis
AMD09_RS08825	PWY-621	sucrose degradation III (sucrose invertase)
AMD09_RS08825	PWY-7238	sucrose biosynthesis II
AMD09_RS08825	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMD09_RS08830	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMD09_RS08830	PWY-6855	chitin degradation I (archaea)
AMD09_RS08830	PWY-6906	chitin derivatives degradation
AMD09_RS08835	PWY-5101	L-isoleucine biosynthesis II
AMD09_RS08835	PWY-5103	L-isoleucine biosynthesis III
AMD09_RS08835	PWY-5104	L-isoleucine biosynthesis IV
AMD09_RS08835	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMD09_RS08840	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS08840	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMD09_RS08840	PWY-7242	D-fructuronate degradation
AMD09_RS08840	PWY-7310	D-glucosaminate degradation
AMD09_RS08840	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMD09_RS08955	PWY-6502	oxidized GTP and dGTP detoxification
AMD09_RS08970	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS09010	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AMD09_RS09010	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AMD09_RS09015	PWY-6823	molybdenum cofactor biosynthesis
AMD09_RS09065	PWY-6823	molybdenum cofactor biosynthesis
AMD09_RS09095	PWY-2201	folate transformations I
AMD09_RS09100	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMD09_RS09100	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMD09_RS09100	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS09100	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS09100	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMD09_RS09100	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMD09_RS09100	PWY-7205	CMP phosphorylation
AMD09_RS09100	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMD09_RS09100	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS09100	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS09100	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS09100	PWY-7224	purine deoxyribonucleosides salvage
AMD09_RS09100	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS09100	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMD09_RS09110	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMD09_RS09110	PWY-5109	2-methylbutanoate biosynthesis
AMD09_RS09110	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMD09_RS09110	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMD09_RS09110	PWY-5177	glutaryl-CoA degradation
AMD09_RS09110	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMD09_RS09110	PWY-6435	4-hydroxybenzoate biosynthesis V
AMD09_RS09110	PWY-6583	pyruvate fermentation to butanol I
AMD09_RS09110	PWY-6863	pyruvate fermentation to hexanol
AMD09_RS09110	PWY-6883	pyruvate fermentation to butanol II
AMD09_RS09110	PWY-6944	androstenedione degradation
AMD09_RS09110	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMD09_RS09110	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMD09_RS09110	PWY-7007	methyl ketone biosynthesis
AMD09_RS09110	PWY-7046	4-coumarate degradation (anaerobic)
AMD09_RS09110	PWY-7094	fatty acid salvage
AMD09_RS09110	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMD09_RS09110	PWY-735	jasmonic acid biosynthesis
AMD09_RS09110	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMD09_RS09110	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMD09_RS09110	PWY-7726	AMD09_RS09110
AMD09_RS09360	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS09420	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS09540	PWY-6823	molybdenum cofactor biosynthesis
AMD09_RS09750	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS09755	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMD09_RS09755	PWY-6596	adenosine nucleotides degradation I
AMD09_RS09755	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS09760	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMD09_RS09760	PWY-2201	folate transformations I
AMD09_RS09760	PWY-3841	folate transformations II
AMD09_RS09760	PWY-5030	L-histidine degradation III
AMD09_RS09760	PWY-5497	purine nucleobases degradation II (anaerobic)
AMD09_RS09760	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMD09_RS09775	PWY-3801	sucrose degradation II (sucrose synthase)
AMD09_RS09775	PWY-6527	stachyose degradation
AMD09_RS09775	PWY-7238	sucrose biosynthesis II
AMD09_RS09775	PWY-7343	UDP-glucose biosynthesis
AMD09_RS09785	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS09785	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMD09_RS09785	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS09810	PWY-7205	CMP phosphorylation
AMD09_RS09825	PWY-43	putrescine biosynthesis II
AMD09_RS09850	PWY-5941	glycogen degradation II (eukaryotic)
AMD09_RS09850	PWY-6724	starch degradation II
AMD09_RS09850	PWY-6737	starch degradation V
AMD09_RS09850	PWY-7238	sucrose biosynthesis II
AMD09_RS09975	PWY-5344	L-homocysteine biosynthesis
AMD09_RS10005	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AMD09_RS10025	PWY-3341	L-proline biosynthesis III
AMD09_RS10025	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMD09_RS10030	PWY-3341	L-proline biosynthesis III
AMD09_RS10030	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMD09_RS10040	PWY-4983	L-citrulline-nitric oxide cycle
AMD09_RS10040	PWY-4984	urea cycle
AMD09_RS10040	PWY-5	canavanine biosynthesis
AMD09_RS10040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMD09_RS10040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMD09_RS10045	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMD09_RS10045	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMD09_RS10055	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMD09_RS10055	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMD09_RS10070	PWY-4983	L-citrulline-nitric oxide cycle
AMD09_RS10070	PWY-4984	urea cycle
AMD09_RS10070	PWY-5	canavanine biosynthesis
AMD09_RS10070	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMD09_RS10070	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMD09_RS10075	PWY-5686	UMP biosynthesis
AMD09_RS10115	PWY-5686	UMP biosynthesis
AMD09_RS10185	PWY-181	photorespiration
AMD09_RS10190	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AMD09_RS10190	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AMD09_RS10190	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AMD09_RS10190	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AMD09_RS10190	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AMD09_RS10190	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AMD09_RS10190	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AMD09_RS10190	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AMD09_RS10190	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AMD09_RS10190	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AMD09_RS10225	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMD09_RS10230	PWY-2301	<i>myo</i>-inositol biosynthesis
AMD09_RS10230	PWY-4702	phytate degradation I
AMD09_RS10230	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AMD09_RS10235	PWY-6854	ethylene biosynthesis III (microbes)
AMD09_RS10260	PWY-6605	adenine and adenosine salvage II
AMD09_RS10260	PWY-6610	adenine and adenosine salvage IV
AMD09_RS10310	PWY-5676	acetyl-CoA fermentation to butanoate II
AMD09_RS10310	PWY-5741	ethylmalonyl-CoA pathway
AMD09_RS10310	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMD09_RS10345	PWY-6938	NADH repair
AMD09_RS10350	PWY-6700	queuosine biosynthesis
AMD09_RS10595	PWY-3781	aerobic respiration I (cytochrome c)
AMD09_RS10595	PWY-6692	Fe(II) oxidation
AMD09_RS10595	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AMD09_RS10595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMD09_RS10705	PWY-381	nitrate reduction II (assimilatory)
AMD09_RS10705	PWY-5675	nitrate reduction V (assimilatory)
AMD09_RS10705	PWY-6549	L-glutamine biosynthesis III
AMD09_RS10705	PWY-6963	ammonia assimilation cycle I
AMD09_RS10705	PWY-6964	ammonia assimilation cycle II
AMD09_RS10715	PWY-381	nitrate reduction II (assimilatory)
AMD09_RS10715	PWY-5675	nitrate reduction V (assimilatory)
AMD09_RS10715	PWY-6549	L-glutamine biosynthesis III
AMD09_RS10715	PWY-6963	ammonia assimilation cycle I
AMD09_RS10715	PWY-6964	ammonia assimilation cycle II
AMD09_RS10790	PWY-5022	4-aminobutanoate degradation V
AMD09_RS10790	PWY-6728	methylaspartate cycle
AMD09_RS10790	PWY-7126	ethylene biosynthesis IV
AMD09_RS10875	PWY-6700	queuosine biosynthesis
AMD09_RS10880	PWY-6700	queuosine biosynthesis
AMD09_RS10910	PWY-4702	phytate degradation I
AMD09_RS10920	PWY-7183	pyrimidine nucleobases salvage I
AMD09_RS10925	PWY-6788	cellulose degradation II (fungi)
AMD09_RS10935	PWY-4041	&gamma;-glutamyl cycle
AMD09_RS10935	PWY-5826	hypoglycin biosynthesis
AMD09_RS10960	PWY-6825	phosphatidylcholine biosynthesis V
AMD09_RS11025	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS11155	PWY-6891	thiazole biosynthesis II (Bacillus)
AMD09_RS11155	PWY-6892	thiazole biosynthesis I (E. coli)
AMD09_RS11155	PWY-7560	methylerythritol phosphate pathway II
AMD09_RS11160	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS11160	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMD09_RS11160	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMD09_RS11160	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS11170	PWY-5129	sphingolipid biosynthesis (plants)
AMD09_RS11185	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS11200	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMD09_RS11200	PWY-622	starch biosynthesis
AMD09_RS11245	PWY-6655	xanthan biosynthesis
AMD09_RS11245	PWY-6658	acetan biosynthesis
AMD09_RS11320	PWY-5941	glycogen degradation II (eukaryotic)
AMD09_RS11320	PWY-6724	starch degradation II
AMD09_RS11320	PWY-6737	starch degradation V
AMD09_RS11320	PWY-7238	sucrose biosynthesis II
AMD09_RS11370	PWY-4261	glycerol degradation I
AMD09_RS11385	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS11390	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS11420	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS11420	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMD09_RS11420	PWY-7242	D-fructuronate degradation
AMD09_RS11420	PWY-7310	D-glucosaminate degradation
AMD09_RS11420	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMD09_RS11425	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS11425	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS11425	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS11425	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS11425	PWY-5723	Rubisco shunt
AMD09_RS11425	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS11425	PWY-6886	1-butanol autotrophic biosynthesis
AMD09_RS11425	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS11425	PWY-7003	glycerol degradation to butanol
AMD09_RS11425	PWY-7124	ethylene biosynthesis V (engineered)
AMD09_RS11425	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMD09_RS11435	PWY-7130	L-glucose degradation
AMD09_RS11450	PWY-2941	L-lysine biosynthesis II
AMD09_RS11450	PWY-2942	L-lysine biosynthesis III
AMD09_RS11450	PWY-5097	L-lysine biosynthesis VI
AMD09_RS11485	PWY-6910	hydroxymethylpyrimidine salvage
AMD09_RS11485	PWY-7356	thiamin salvage IV (yeast)
AMD09_RS11485	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMD09_RS11580	PWY-2781	<i>cis</i>-zeatin biosynthesis
AMD09_RS11585	PWY-6614	tetrahydrofolate biosynthesis
AMD09_RS11625	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS11625	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMD09_RS11625	PWY-6596	adenosine nucleotides degradation I
AMD09_RS11625	PWY-6606	guanosine nucleotides degradation II
AMD09_RS11625	PWY-6607	guanosine nucleotides degradation I
AMD09_RS11625	PWY-6608	guanosine nucleotides degradation III
AMD09_RS11625	PWY-7185	UTP and CTP dephosphorylation I
AMD09_RS11640	PWY-7560	methylerythritol phosphate pathway II
AMD09_RS11645	PWY-7560	methylerythritol phosphate pathway II
AMD09_RS11655	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS11655	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS11655	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS11655	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS11655	PWY-5723	Rubisco shunt
AMD09_RS11655	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS11655	PWY-6886	1-butanol autotrophic biosynthesis
AMD09_RS11655	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS11655	PWY-7003	glycerol degradation to butanol
AMD09_RS11655	PWY-7124	ethylene biosynthesis V (engineered)
AMD09_RS11655	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMD09_RS11665	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMD09_RS11665	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMD09_RS11670	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMD09_RS11670	PWY-7177	UTP and CTP dephosphorylation II
AMD09_RS11670	PWY-7185	UTP and CTP dephosphorylation I
AMD09_RS11815	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMD09_RS11815	PWY-7688	AMD09_RS11815
AMD09_RS12435	PWY-5747	2-methylcitrate cycle II
AMD09_RS12550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMD09_RS12550	PWY-5686	UMP biosynthesis
AMD09_RS12550	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMD09_RS12560	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMD09_RS12560	PWY-5686	UMP biosynthesis
AMD09_RS12560	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMD09_RS12565	PWY-2941	L-lysine biosynthesis II
AMD09_RS12565	PWY-2942	L-lysine biosynthesis III
AMD09_RS12565	PWY-5097	L-lysine biosynthesis VI
AMD09_RS12665	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AMD09_RS12665	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS12665	PWY-6416	quinate degradation II
AMD09_RS12665	PWY-6707	gallate biosynthesis
AMD09_RS12670	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AMD09_RS12670	PWY-5389	3-methylthiopropanoate biosynthesis
AMD09_RS12760	PWY-702	L-methionine biosynthesis II
AMD09_RS12765	PWY-2941	L-lysine biosynthesis II
AMD09_RS12765	PWY-2942	L-lysine biosynthesis III
AMD09_RS12765	PWY-5097	L-lysine biosynthesis VI
AMD09_RS12765	PWY-6559	spermidine biosynthesis II
AMD09_RS12765	PWY-6562	norspermidine biosynthesis
AMD09_RS12765	PWY-7153	grixazone biosynthesis
AMD09_RS12835	PWY-5686	UMP biosynthesis
AMD09_RS12840	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS12840	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS12850	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS12850	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS12915	PWY-3801	sucrose degradation II (sucrose synthase)
AMD09_RS12915	PWY-5054	sorbitol biosynthesis I
AMD09_RS12915	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AMD09_RS12915	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMD09_RS12915	PWY-5659	GDP-mannose biosynthesis
AMD09_RS12915	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS12915	PWY-621	sucrose degradation III (sucrose invertase)
AMD09_RS12915	PWY-622	starch biosynthesis
AMD09_RS12915	PWY-6981	chitin biosynthesis
AMD09_RS12915	PWY-6992	1,5-anhydrofructose degradation
AMD09_RS12915	PWY-7238	sucrose biosynthesis II
AMD09_RS12915	PWY-7347	sucrose biosynthesis III
AMD09_RS12915	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMD09_RS12920	PWY-5155	&beta;-alanine biosynthesis III
AMD09_RS12930	PWY-6654	phosphopantothenate biosynthesis III
AMD09_RS12935	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMD09_RS12935	PWY-6148	tetrahydromethanopterin biosynthesis
AMD09_RS12935	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMD09_RS12935	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMD09_RS12950	PWY-5663	tetrahydrobiopterin biosynthesis I
AMD09_RS12950	PWY-5664	tetrahydrobiopterin biosynthesis II
AMD09_RS12950	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMD09_RS12950	PWY-6703	preQ<sub>0</sub> biosynthesis
AMD09_RS12950	PWY-6983	tetrahydrobiopterin biosynthesis III
AMD09_RS12950	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMD09_RS13150	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AMD09_RS13165	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS13170	PWY-3461	L-tyrosine biosynthesis II
AMD09_RS13170	PWY-3462	L-phenylalanine biosynthesis II
AMD09_RS13170	PWY-6120	L-tyrosine biosynthesis III
AMD09_RS13170	PWY-6627	salinosporamide A biosynthesis
AMD09_RS13170	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AMD09_RS13170	PWY-7626	bacilysin biosynthesis
AMD09_RS13230	PWY-5028	L-histidine degradation II
AMD09_RS13230	PWY-5030	L-histidine degradation III
AMD09_RS13235	PWY-5028	L-histidine degradation II
AMD09_RS13235	PWY-5030	L-histidine degradation III
AMD09_RS13245	PWY-5028	L-histidine degradation II
AMD09_RS13245	PWY-5030	L-histidine degradation III
AMD09_RS13260	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AMD09_RS13260	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AMD09_RS13400	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMD09_RS13400	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS13400	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMD09_RS13400	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMD09_RS13405	PWY-5647	2-nitrobenzoate degradation I
AMD09_RS13405	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMD09_RS13405	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMD09_RS13405	PWY-6505	L-tryptophan degradation XII (Geobacillus)
AMD09_RS13415	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMD09_RS13415	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMD09_RS13420	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMD09_RS13420	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMD09_RS13420	PWY-7717	AMD09_RS13420
AMD09_RS13445	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS13445	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMD09_RS13445	PWY-6596	adenosine nucleotides degradation I
AMD09_RS13445	PWY-6606	guanosine nucleotides degradation II
AMD09_RS13445	PWY-6607	guanosine nucleotides degradation I
AMD09_RS13445	PWY-6608	guanosine nucleotides degradation III
AMD09_RS13445	PWY-7185	UTP and CTP dephosphorylation I
AMD09_RS13450	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMD09_RS13450	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMD09_RS13450	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMD09_RS13455	PWY-6825	phosphatidylcholine biosynthesis V
AMD09_RS13525	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMD09_RS13525	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS13525	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMD09_RS13525	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMD09_RS13590	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMD09_RS13625	PWY-2201	folate transformations I
AMD09_RS13625	PWY-3841	folate transformations II
AMD09_RS13665	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AMD09_RS13710	PWY-5392	reductive TCA cycle II
AMD09_RS13710	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMD09_RS13710	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS13710	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS13710	PWY-6728	methylaspartate cycle
AMD09_RS13710	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS13710	PWY-7254	TCA cycle VII (acetate-producers)
AMD09_RS13710	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMD09_RS13725	PWY-6123	inosine-5'-phosphate biosynthesis I
AMD09_RS13725	PWY-6124	inosine-5'-phosphate biosynthesis II
AMD09_RS13725	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS13725	PWY-7234	inosine-5'-phosphate biosynthesis III
AMD09_RS13745	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMD09_RS13750	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMD09_RS13755	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMD09_RS13755	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMD09_RS13800	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AMD09_RS13805	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMD09_RS13805	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMD09_RS14100	PWY-6803	phosphatidylcholine acyl editing
AMD09_RS14100	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMD09_RS14100	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMD09_RS14100	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AMD09_RS14105	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMD09_RS14105	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS14105	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMD09_RS14105	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMD09_RS14115	PWY-5392	reductive TCA cycle II
AMD09_RS14115	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMD09_RS14115	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS14115	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS14115	PWY-6728	methylaspartate cycle
AMD09_RS14115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS14115	PWY-7254	TCA cycle VII (acetate-producers)
AMD09_RS14115	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMD09_RS14335	PWY-5667	CDP-diacylglycerol biosynthesis I
AMD09_RS14335	PWY-5981	CDP-diacylglycerol biosynthesis III
AMD09_RS14340	PWY-7294	xylose degradation IV
AMD09_RS14340	PWY-7295	L-arabinose degradation IV
AMD09_RS14340	PWY-7560	methylerythritol phosphate pathway II
AMD09_RS14365	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMD09_RS14365	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMD09_RS14365	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMD09_RS14365	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMD09_RS14365	PWY-6113	superpathway of mycolate biosynthesis
AMD09_RS14365	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMD09_RS14365	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS14365	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS14365	PWY-7663	gondoate biosynthesis (anaerobic)
AMD09_RS14365	PWY-7664	oleate biosynthesis IV (anaerobic)
AMD09_RS14365	PWYG-321	mycolate biosynthesis
AMD09_RS14375	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMD09_RS14375	PWY-622	starch biosynthesis
AMD09_RS14390	PWY-4381	fatty acid biosynthesis initiation I
AMD09_RS14390	PWY-5743	3-hydroxypropanoate cycle
AMD09_RS14390	PWY-5744	glyoxylate assimilation
AMD09_RS14390	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMD09_RS14390	PWY-6679	jadomycin biosynthesis
AMD09_RS14390	PWY-6722	candicidin biosynthesis
AMD09_RS14390	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS14760	PWY-6902	chitin degradation II
AMD09_RS14840	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMD09_RS14840	PWY-5109	2-methylbutanoate biosynthesis
AMD09_RS14840	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMD09_RS14840	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMD09_RS14840	PWY-5177	glutaryl-CoA degradation
AMD09_RS14840	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMD09_RS14840	PWY-6435	4-hydroxybenzoate biosynthesis V
AMD09_RS14840	PWY-6583	pyruvate fermentation to butanol I
AMD09_RS14840	PWY-6863	pyruvate fermentation to hexanol
AMD09_RS14840	PWY-6883	pyruvate fermentation to butanol II
AMD09_RS14840	PWY-6944	androstenedione degradation
AMD09_RS14840	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMD09_RS14840	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMD09_RS14840	PWY-7007	methyl ketone biosynthesis
AMD09_RS14840	PWY-7046	4-coumarate degradation (anaerobic)
AMD09_RS14840	PWY-7094	fatty acid salvage
AMD09_RS14840	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMD09_RS14840	PWY-735	jasmonic acid biosynthesis
AMD09_RS14840	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMD09_RS14840	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMD09_RS14840	PWY-7726	AMD09_RS14840
AMD09_RS14870	PWY-5642	2,4-dinitrotoluene degradation
AMD09_RS14870	PWY-6373	acrylate degradation
AMD09_RS14890	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS14930	PWY-5506	methanol oxidation to formaldehyde IV
AMD09_RS14965	PWY-6829	tRNA methylation (yeast)
AMD09_RS14965	PWY-7285	methylwyosine biosynthesis
AMD09_RS14965	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AMD09_RS14985	PWY-723	alkylnitronates degradation
AMD09_RS15000	PWY-6317	galactose degradation I (Leloir pathway)
AMD09_RS15145	PWY-3781	aerobic respiration I (cytochrome c)
AMD09_RS15145	PWY-4521	arsenite oxidation I (respiratory)
AMD09_RS15145	PWY-6692	Fe(II) oxidation
AMD09_RS15145	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMD09_RS15145	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AMD09_RS15175	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMD09_RS15175	PWY-6167	flavin biosynthesis II (archaea)
AMD09_RS15175	PWY-6168	flavin biosynthesis III (fungi)
AMD09_RS15465	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS15465	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS15595	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS15595	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS15610	PWY-2941	L-lysine biosynthesis II
AMD09_RS15610	PWY-2942	L-lysine biosynthesis III
AMD09_RS15610	PWY-5097	L-lysine biosynthesis VI
AMD09_RS15610	PWY-6559	spermidine biosynthesis II
AMD09_RS15610	PWY-6562	norspermidine biosynthesis
AMD09_RS15610	PWY-7153	grixazone biosynthesis
AMD09_RS15635	PWY-5686	UMP biosynthesis
AMD09_RS15680	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMD09_RS15685	PWY-3341	L-proline biosynthesis III
AMD09_RS15685	PWY-4981	L-proline biosynthesis II (from arginine)
AMD09_RS15685	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMD09_RS15745	PWY-6823	molybdenum cofactor biosynthesis
AMD09_RS15745	PWY-6891	thiazole biosynthesis II (Bacillus)
AMD09_RS15745	PWY-6892	thiazole biosynthesis I (E. coli)
AMD09_RS15745	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMD09_RS15850	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMD09_RS15850	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMD09_RS15850	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMD09_RS15860	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMD09_RS15860	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMD09_RS15880	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS15880	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS15895	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMD09_RS15895	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMD09_RS15975	PWY-7533	gliotoxin biosynthesis
AMD09_RS16110	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMD09_RS16110	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMD09_RS16115	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMD09_RS16120	PWY-6164	3-dehydroquinate biosynthesis I
AMD09_RS16130	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMD09_RS16130	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMD09_RS16270	PWY-5344	L-homocysteine biosynthesis
AMD09_RS16410	PWY-2201	folate transformations I
AMD09_RS16415	PWY-2722	trehalose degradation IV
AMD09_RS16415	PWY-2723	trehalose degradation V
AMD09_RS16415	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMD09_RS16415	PWY-5661	GDP-glucose biosynthesis
AMD09_RS16415	PWY-621	sucrose degradation III (sucrose invertase)
AMD09_RS16415	PWY-7238	sucrose biosynthesis II
AMD09_RS16415	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMD09_RS16435	PWY-6902	chitin degradation II
AMD09_RS16455	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS16485	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS16585	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMD09_RS16585	PWY-5368	dimorphecolate biosynthesis
AMD09_RS16585	PWY-5995	linoleate biosynthesis I (plants)
AMD09_RS16585	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMD09_RS16585	PWY-6803	phosphatidylcholine acyl editing
AMD09_RS16585	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMD09_RS16585	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMD09_RS16585	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMD09_RS16585	PWY-7470	phosphatidylcholine biosynthesis VII
AMD09_RS16585	PWY-7618	ricinoleate biosynthesis
AMD09_RS16600	PWY-1001	cellulose biosynthesis
AMD09_RS16600	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS16600	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMD09_RS16600	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMD09_RS16600	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS16625	PWY-6420	pyrroloquinoline quinone biosynthesis
AMD09_RS16650	PWY-2722	trehalose degradation IV
AMD09_RS16650	PWY-2723	trehalose degradation V
AMD09_RS16650	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMD09_RS16650	PWY-5661	GDP-glucose biosynthesis
AMD09_RS16650	PWY-621	sucrose degradation III (sucrose invertase)
AMD09_RS16650	PWY-7238	sucrose biosynthesis II
AMD09_RS16650	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMD09_RS16730	PWY-6703	preQ<sub>0</sub> biosynthesis
AMD09_RS16740	PWY-6703	preQ<sub>0</sub> biosynthesis
AMD09_RS16970	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMD09_RS16970	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMD09_RS16970	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMD09_RS16980	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMD09_RS16980	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMD09_RS16980	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMD09_RS16985	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMD09_RS16985	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMD09_RS16985	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMD09_RS16995	PWY-5443	aminopropanol phosphate biosynthesis I
AMD09_RS17005	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMD09_RS17005	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMD09_RS17005	PWY-6268	adenosylcobalamin salvage from cobalamin
AMD09_RS17005	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMD09_RS17155	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS17155	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMD09_RS17360	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMD09_RS17360	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMD09_RS17360	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMD09_RS17360	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMD09_RS17375	PWY-2161	folate polyglutamylation
AMD09_RS17405	PWY-5515	L-arabinose degradation II
AMD09_RS17405	PWY-5525	D-glucuronate degradation I
AMD09_RS17405	PWY-7378	aminopropanol phosphate biosynthesis II
AMD09_RS17485	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS17485	PWY-5392	reductive TCA cycle II
AMD09_RS17485	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMD09_RS17485	PWY-5690	TCA cycle II (plants and fungi)
AMD09_RS17485	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS17485	PWY-6728	methylaspartate cycle
AMD09_RS17485	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS17485	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMD09_RS17485	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMD09_RS17505	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMD09_RS17515	PWY-6164	3-dehydroquinate biosynthesis I
AMD09_RS17760	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AMD09_RS17780	PWY-7560	methylerythritol phosphate pathway II
AMD09_RS17795	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMD09_RS17840	PWY-7731	AMD09_RS17840
AMD09_RS17880	PWY-5057	L-valine degradation II
AMD09_RS17880	PWY-5076	L-leucine degradation III
AMD09_RS17880	PWY-5078	L-isoleucine degradation II
AMD09_RS17880	PWY-5101	L-isoleucine biosynthesis II
AMD09_RS17880	PWY-5103	L-isoleucine biosynthesis III
AMD09_RS17880	PWY-5104	L-isoleucine biosynthesis IV
AMD09_RS17880	PWY-5108	L-isoleucine biosynthesis V
AMD09_RS17995	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMD09_RS17995	PWY-5723	Rubisco shunt
AMD09_RS18010	PWY-2582	brassinosteroid biosynthesis II
AMD09_RS18010	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMD09_RS18010	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMD09_RS18010	PWY-6948	sitosterol degradation to androstenedione
AMD09_RS18010	PWY-699	brassinosteroid biosynthesis I
AMD09_RS18010	PWY-7299	progesterone biosynthesis
AMD09_RS18040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMD09_RS18080	PWY-5530	sorbitol biosynthesis II
AMD09_RS18170	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMD09_RS18170	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMD09_RS18170	PWY-6268	adenosylcobalamin salvage from cobalamin
AMD09_RS18170	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMD09_RS18195	PWY-7294	xylose degradation IV
AMD09_RS18195	PWY-7295	L-arabinose degradation IV
AMD09_RS18255	PWY-7723	AMD09_RS18255
AMD09_RS18290	PWY-3841	folate transformations II
AMD09_RS18290	PWY-6614	tetrahydrofolate biosynthesis
AMD09_RS18300	PWY-3841	folate transformations II
AMD09_RS18300	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMD09_RS18300	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMD09_RS18300	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMD09_RS18300	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMD09_RS18300	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMD09_RS18325	PWY-7039	phosphatidate metabolism, as a signaling molecule
AMD09_RS18440	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMD09_RS18440	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AMD09_RS18475	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS18475	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMD09_RS18475	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS18475	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS18475	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AMD09_RS18475	PWY-6549	L-glutamine biosynthesis III
AMD09_RS18475	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMD09_RS18475	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMD09_RS18475	PWY-7124	ethylene biosynthesis V (engineered)
AMD09_RS18485	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMD09_RS18545	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS18560	PWY-6502	oxidized GTP and dGTP detoxification
AMD09_RS18560	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMD09_RS18560	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMD09_RS18560	PWY-6897	thiamin salvage II
AMD09_RS18560	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMD09_RS18560	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMD09_RS18560	PWY-7356	thiamin salvage IV (yeast)
AMD09_RS18560	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMD09_RS18580	PWY-2201	folate transformations I
AMD09_RS18580	PWY-5497	purine nucleobases degradation II (anaerobic)
AMD09_RS18600	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS18600	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS18605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS18605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS18610	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS18610	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMD09_RS18610	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMD09_RS18610	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS18615	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS18615	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMD09_RS18615	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMD09_RS18615	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS18625	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS18625	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMD09_RS18625	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS18630	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMD09_RS18630	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMD09_RS18650	PWY-2201	folate transformations I
AMD09_RS18670	PWY-2201	folate transformations I
AMD09_RS18745	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMD09_RS18745	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMD09_RS18745	PWY-6896	thiamin salvage I
AMD09_RS18745	PWY-6897	thiamin salvage II
AMD09_RS18755	PWY-6167	flavin biosynthesis II (archaea)
AMD09_RS18755	PWY-6168	flavin biosynthesis III (fungi)
AMD09_RS18760	PWY-6167	flavin biosynthesis II (archaea)
AMD09_RS18760	PWY-6168	flavin biosynthesis III (fungi)
AMD09_RS18760	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMD09_RS18765	PWY-6167	flavin biosynthesis II (archaea)
AMD09_RS18765	PWY-6168	flavin biosynthesis III (fungi)
AMD09_RS18765	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS18775	PWY-5525	D-glucuronate degradation I
AMD09_RS18790	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS18790	PWY-181	photorespiration
AMD09_RS18790	PWY-2161	folate polyglutamylation
AMD09_RS18790	PWY-2201	folate transformations I
AMD09_RS18790	PWY-3661	glycine betaine degradation I
AMD09_RS18790	PWY-3661-1	glycine betaine degradation II (mammalian)
AMD09_RS18790	PWY-3841	folate transformations II
AMD09_RS18790	PWY-5497	purine nucleobases degradation II (anaerobic)
AMD09_RS18830	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMD09_RS18835	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMD09_RS18840	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMD09_RS18840	PWY-3162	L-tryptophan degradation V (side chain pathway)
AMD09_RS18840	PWY-5057	L-valine degradation II
AMD09_RS18840	PWY-5076	L-leucine degradation III
AMD09_RS18840	PWY-5078	L-isoleucine degradation II
AMD09_RS18840	PWY-5079	L-phenylalanine degradation III
AMD09_RS18840	PWY-5082	L-methionine degradation III
AMD09_RS18840	PWY-5480	pyruvate fermentation to ethanol I
AMD09_RS18840	PWY-5486	pyruvate fermentation to ethanol II
AMD09_RS18840	PWY-5751	phenylethanol biosynthesis
AMD09_RS18840	PWY-6313	serotonin degradation
AMD09_RS18840	PWY-6333	acetaldehyde biosynthesis I
AMD09_RS18840	PWY-6342	noradrenaline and adrenaline degradation
AMD09_RS18840	PWY-6454	vancomycin resistance I
AMD09_RS18840	PWY-6587	pyruvate fermentation to ethanol III
AMD09_RS18840	PWY-6802	salidroside biosynthesis
AMD09_RS18840	PWY-6871	3-methylbutanol biosynthesis
AMD09_RS18840	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS18840	PWY-7013	L-1,2-propanediol degradation
AMD09_RS18840	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMD09_RS18840	PWY-7118	chitin degradation to ethanol
AMD09_RS18840	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMD09_RS18870	PWY-6840	homoglutathione biosynthesis
AMD09_RS18870	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMD09_RS18915	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMD09_RS18915	PWY-7494	choline degradation IV
AMD09_RS18920	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMD09_RS18920	PWY-7494	choline degradation IV
AMD09_RS18935	PWY-6906	chitin derivatives degradation
AMD09_RS18935	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AMD09_RS18935	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AMD09_RS18970	PWY-6807	xyloglucan degradation II (exoglucanase)
AMD09_RS19075	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMD09_RS19075	PWY-6148	tetrahydromethanopterin biosynthesis
AMD09_RS19075	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMD09_RS19075	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMD09_RS19135	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS19165	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMD09_RS19165	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMD09_RS19170	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMD09_RS19170	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMD09_RS19185	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMD09_RS19185	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMD09_RS19250	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMD09_RS19250	PWY-3162	L-tryptophan degradation V (side chain pathway)
AMD09_RS19250	PWY-5057	L-valine degradation II
AMD09_RS19250	PWY-5076	L-leucine degradation III
AMD09_RS19250	PWY-5078	L-isoleucine degradation II
AMD09_RS19250	PWY-5079	L-phenylalanine degradation III
AMD09_RS19250	PWY-5082	L-methionine degradation III
AMD09_RS19250	PWY-5480	pyruvate fermentation to ethanol I
AMD09_RS19250	PWY-5486	pyruvate fermentation to ethanol II
AMD09_RS19250	PWY-5751	phenylethanol biosynthesis
AMD09_RS19250	PWY-6313	serotonin degradation
AMD09_RS19250	PWY-6333	acetaldehyde biosynthesis I
AMD09_RS19250	PWY-6342	noradrenaline and adrenaline degradation
AMD09_RS19250	PWY-6454	vancomycin resistance I
AMD09_RS19250	PWY-6587	pyruvate fermentation to ethanol III
AMD09_RS19250	PWY-6802	salidroside biosynthesis
AMD09_RS19250	PWY-6871	3-methylbutanol biosynthesis
AMD09_RS19250	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS19250	PWY-7013	L-1,2-propanediol degradation
AMD09_RS19250	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMD09_RS19250	PWY-7118	chitin degradation to ethanol
AMD09_RS19250	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMD09_RS19300	PWY-5839	menaquinol-7 biosynthesis
AMD09_RS19300	PWY-5844	menaquinol-9 biosynthesis
AMD09_RS19300	PWY-5849	menaquinol-6 biosynthesis
AMD09_RS19300	PWY-5890	menaquinol-10 biosynthesis
AMD09_RS19300	PWY-5891	menaquinol-11 biosynthesis
AMD09_RS19300	PWY-5892	menaquinol-12 biosynthesis
AMD09_RS19300	PWY-5895	menaquinol-13 biosynthesis
AMD09_RS19345	PWY-2941	L-lysine biosynthesis II
AMD09_RS19345	PWY-5097	L-lysine biosynthesis VI
AMD09_RS19400	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMD09_RS19400	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMD09_RS19605	PWY-4061	glutathione-mediated detoxification I
AMD09_RS19605	PWY-6842	glutathione-mediated detoxification II
AMD09_RS19605	PWY-7112	4-hydroxy-2-nonenal detoxification
AMD09_RS19605	PWY-7533	gliotoxin biosynthesis
AMD09_RS19700	PWY-5278	sulfite oxidation III
AMD09_RS19700	PWY-5340	sulfate activation for sulfonation
AMD09_RS19700	PWY-6683	sulfate reduction III (assimilatory)
AMD09_RS19700	PWY-6932	selenate reduction
AMD09_RS19705	PWY-5278	sulfite oxidation III
AMD09_RS19705	PWY-5340	sulfate activation for sulfonation
AMD09_RS19705	PWY-6683	sulfate reduction III (assimilatory)
AMD09_RS19705	PWY-6932	selenate reduction
AMD09_RS19710	PWY-6683	sulfate reduction III (assimilatory)
AMD09_RS19715	PWY-6683	sulfate reduction III (assimilatory)
AMD09_RS19760	PWY-5194	siroheme biosynthesis
AMD09_RS19760	PWY-5441	S-methyl-L-methionine cycle
AMD09_RS19760	PWY-702	L-methionine biosynthesis II
AMD09_RS19760	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMD09_RS19765	PWY-6936	seleno-amino acid biosynthesis
AMD09_RS19770	PWY-6825	phosphatidylcholine biosynthesis V
AMD09_RS19780	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS19780	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMD09_RS19780	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS19780	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS19780	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMD09_RS19785	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS19785	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS19785	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS19785	PWY-5723	Rubisco shunt
AMD09_RS19785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS19785	PWY-6886	1-butanol autotrophic biosynthesis
AMD09_RS19785	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS19785	PWY-7003	glycerol degradation to butanol
AMD09_RS19785	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMD09_RS19785	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMD09_RS19795	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS19795	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS19795	PWY-6886	1-butanol autotrophic biosynthesis
AMD09_RS19795	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS19795	PWY-7003	glycerol degradation to butanol
AMD09_RS19815	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS19815	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS19815	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS19815	PWY-7003	glycerol degradation to butanol
AMD09_RS19820	PWY-2582	brassinosteroid biosynthesis II
AMD09_RS19820	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMD09_RS19820	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMD09_RS19820	PWY-6948	sitosterol degradation to androstenedione
AMD09_RS19820	PWY-699	brassinosteroid biosynthesis I
AMD09_RS19820	PWY-7299	progesterone biosynthesis
AMD09_RS19925	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMD09_RS19925	PWY-5723	Rubisco shunt
AMD09_RS19925	PWY-6891	thiazole biosynthesis II (Bacillus)
AMD09_RS19925	PWY-6892	thiazole biosynthesis I (E. coli)
AMD09_RS19925	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS19925	PWY-7560	methylerythritol phosphate pathway II
AMD09_RS20035	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS20055	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMD09_RS20115	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMD09_RS20115	PWY-5723	Rubisco shunt
AMD09_RS20135	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMD09_RS20135	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMD09_RS20135	PWY-6897	thiamin salvage II
AMD09_RS20135	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMD09_RS20135	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMD09_RS20135	PWY-7356	thiamin salvage IV (yeast)
AMD09_RS20135	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMD09_RS20150	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMD09_RS20235	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS20240	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS20240	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMD09_RS20240	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS20240	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMD09_RS20285	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AMD09_RS20300	PWY-4041	&gamma;-glutamyl cycle
AMD09_RS20300	PWY-5826	hypoglycin biosynthesis
AMD09_RS20305	PWY-5103	L-isoleucine biosynthesis III
AMD09_RS20305	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMD09_RS20310	PWY-5101	L-isoleucine biosynthesis II
AMD09_RS20310	PWY-5103	L-isoleucine biosynthesis III
AMD09_RS20310	PWY-5104	L-isoleucine biosynthesis IV
AMD09_RS20310	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMD09_RS20310	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMD09_RS20310	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMD09_RS20310	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMD09_RS20325	PWY-6871	3-methylbutanol biosynthesis
AMD09_RS20330	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMD09_RS20370	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AMD09_RS20400	PWY-1281	sulfoacetaldehyde degradation I
AMD09_RS20400	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMD09_RS20400	PWY-5482	pyruvate fermentation to acetate II
AMD09_RS20400	PWY-5485	pyruvate fermentation to acetate IV
AMD09_RS20400	PWY-5497	purine nucleobases degradation II (anaerobic)
AMD09_RS20400	PWY-6637	sulfolactate degradation II
AMD09_RS20400	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMD09_RS20480	PWY-5676	acetyl-CoA fermentation to butanoate II
AMD09_RS20480	PWY-5741	ethylmalonyl-CoA pathway
AMD09_RS20480	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMD09_RS20570	PWY-6769	rhamnogalacturonan type I degradation I (fungi)
AMD09_RS20570	PWY-6771	rhamnogalacturonan type I degradation II (bacteria)
AMD09_RS20590	PWY-4202	arsenate detoxification I (glutaredoxin)
AMD09_RS20590	PWY-4621	arsenate detoxification II (glutaredoxin)
AMD09_RS20610	PWY-6788	cellulose degradation II (fungi)
AMD09_RS20620	PWY-1001	cellulose biosynthesis
AMD09_RS20635	PWY-5381	pyridine nucleotide cycling (plants)
AMD09_RS20780	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMD09_RS20780	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMD09_RS20780	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMD09_RS20860	PWY-5669	phosphatidylethanolamine biosynthesis I
AMD09_RS20930	PWY-6749	CMP-legionaminate biosynthesis I
AMD09_RS20935	PWY-5659	GDP-mannose biosynthesis
AMD09_RS20935	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMD09_RS20940	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AMD09_RS20955	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMD09_RS20955	PWY-6808	dTDP-D-forosamine biosynthesis
AMD09_RS20955	PWY-6942	dTDP-D-desosamine biosynthesis
AMD09_RS20955	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMD09_RS20955	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMD09_RS20955	PWY-6974	dTDP-L-olivose biosynthesis
AMD09_RS20955	PWY-6976	dTDP-L-mycarose biosynthesis
AMD09_RS20955	PWY-7104	dTDP-L-megosamine biosynthesis
AMD09_RS20955	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMD09_RS20955	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMD09_RS20955	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMD09_RS20955	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMD09_RS20955	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMD09_RS20955	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMD09_RS20955	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMD09_RS20955	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMD09_RS20955	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMD09_RS20955	PWY-7688	AMD09_RS20955
AMD09_RS20960	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMD09_RS20960	PWY-6808	dTDP-D-forosamine biosynthesis
AMD09_RS20960	PWY-6942	dTDP-D-desosamine biosynthesis
AMD09_RS20960	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMD09_RS20960	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMD09_RS20960	PWY-6974	dTDP-L-olivose biosynthesis
AMD09_RS20960	PWY-6976	dTDP-L-mycarose biosynthesis
AMD09_RS20960	PWY-7104	dTDP-L-megosamine biosynthesis
AMD09_RS20960	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMD09_RS20960	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMD09_RS20960	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMD09_RS20960	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMD09_RS20960	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMD09_RS20960	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMD09_RS20960	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMD09_RS20960	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMD09_RS20960	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMD09_RS20960	PWY-7688	AMD09_RS20960
AMD09_RS21120	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMD09_RS21150	PWY-181	photorespiration
AMD09_RS21160	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMD09_RS21160	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMD09_RS21160	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMD09_RS21160	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMD09_RS21160	PWY-6113	superpathway of mycolate biosynthesis
AMD09_RS21160	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMD09_RS21160	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMD09_RS21160	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMD09_RS21160	PWY-7663	gondoate biosynthesis (anaerobic)
AMD09_RS21160	PWY-7664	oleate biosynthesis IV (anaerobic)
AMD09_RS21160	PWYG-321	mycolate biosynthesis
AMD09_RS21200	PWY-5386	methylglyoxal degradation I
AMD09_RS21225	PWY-6749	CMP-legionaminate biosynthesis I
AMD09_RS21265	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMD09_RS21265	PWY-5667	CDP-diacylglycerol biosynthesis I
AMD09_RS21265	PWY-6453	stigma estolide biosynthesis
AMD09_RS21265	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMD09_RS21265	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMD09_RS21275	PWY-3461	L-tyrosine biosynthesis II
AMD09_RS21275	PWY-3462	L-phenylalanine biosynthesis II
AMD09_RS21275	PWY-6120	L-tyrosine biosynthesis III
AMD09_RS21275	PWY-6627	salinosporamide A biosynthesis
AMD09_RS21275	PWY-7626	bacilysin biosynthesis
AMD09_RS21285	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS21295	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS21335	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMD09_RS21335	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMD09_RS21490	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMD09_RS21735	PWY-3821	galactose degradation III
AMD09_RS21735	PWY-6317	galactose degradation I (Leloir pathway)
AMD09_RS21735	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMD09_RS21735	PWY-6527	stachyose degradation
AMD09_RS21735	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMD09_RS21735	PWY-7344	UDP-D-galactose biosynthesis
AMD09_RS21745	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMD09_RS21745	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMD09_RS21745	PWY-7622	UDP-galactofuranose biosynthesis
AMD09_RS22240	PWY-6168	flavin biosynthesis III (fungi)
AMD09_RS22240	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMD09_RS22275	PWY-6825	phosphatidylcholine biosynthesis V
AMD09_RS22435	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMD09_RS22455	PWY-5913	TCA cycle VI (obligate autotrophs)
AMD09_RS22455	PWY-6549	L-glutamine biosynthesis III
AMD09_RS22455	PWY-6728	methylaspartate cycle
AMD09_RS22455	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMD09_RS22455	PWY-7124	ethylene biosynthesis V (engineered)
AMD09_RS22455	PWY-7254	TCA cycle VII (acetate-producers)
AMD09_RS22455	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMD09_RS22520	PWY-6700	queuosine biosynthesis
AMD09_RS22585	PWY-6454	vancomycin resistance I
AMD09_RS22585	PWY-6455	vancomycin resistance II
AMD09_RS22600	PWY-1042	glycolysis IV (plant cytosol)
AMD09_RS22600	PWY-1622	formaldehyde assimilation I (serine pathway)
AMD09_RS22600	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMD09_RS22600	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMD09_RS22600	PWY-5723	Rubisco shunt
AMD09_RS22600	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMD09_RS22600	PWY-6886	1-butanol autotrophic biosynthesis
AMD09_RS22600	PWY-6901	superpathway of glucose and xylose degradation
AMD09_RS22600	PWY-7003	glycerol degradation to butanol
AMD09_RS22600	PWY-7124	ethylene biosynthesis V (engineered)
AMD09_RS22600	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMD09_RS22640	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMD09_RS22640	PWY-6148	tetrahydromethanopterin biosynthesis
AMD09_RS22640	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMD09_RS22640	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMD09_RS22645	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMD09_RS22645	PWY-5368	dimorphecolate biosynthesis
AMD09_RS22645	PWY-5995	linoleate biosynthesis I (plants)
AMD09_RS22645	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMD09_RS22645	PWY-6803	phosphatidylcholine acyl editing
AMD09_RS22645	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMD09_RS22645	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMD09_RS22645	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMD09_RS22645	PWY-7470	phosphatidylcholine biosynthesis VII
AMD09_RS22645	PWY-7618	ricinoleate biosynthesis
AMD09_RS22715	PWY-3781	aerobic respiration I (cytochrome c)
AMD09_RS22715	PWY-4521	arsenite oxidation I (respiratory)
AMD09_RS22715	PWY-6692	Fe(II) oxidation
AMD09_RS22715	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMD09_RS22725	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AMD09_RS22725	PWY-6853	ethylene biosynthesis II (microbes)
AMD09_RS22725	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMD09_RS22820	PWY-5663	tetrahydrobiopterin biosynthesis I
AMD09_RS22820	PWY-5664	tetrahydrobiopterin biosynthesis II
AMD09_RS22820	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMD09_RS22820	PWY-6703	preQ<sub>0</sub> biosynthesis
AMD09_RS22820	PWY-6983	tetrahydrobiopterin biosynthesis III
AMD09_RS22820	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMD09_RS22945	PWY-5169	cyanurate degradation
AMD09_RS22945	PWY-5703	urea degradation I
AMD09_RS22950	PWY-5169	cyanurate degradation
AMD09_RS22950	PWY-5703	urea degradation I
AMD09_RS22950	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMD09_RS23115	PWY-7533	gliotoxin biosynthesis
AMD09_RS23150	PWY-6348	phosphate acquisition