AMD09_RS00030 PF00204 DNA gyrase B AMD09_RS00095 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD09_RS00200 PF01694 Rhomboid family AMD09_RS00220 PF04389 Peptidase family M28 AMD09_RS00320 PF07690 Major Facilitator Superfamily AMD09_RS00400 PF00308 Bacterial dnaA protein AMD09_RS00400 PF08299 Bacterial dnaA protein helix-turn-helix AMD09_RS00400 PF11638 DnaA N-terminal domain AMD09_RS00405 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD09_RS00405 PF02767 DNA polymerase III beta subunit, central domain AMD09_RS00405 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD09_RS00410 PF02463 RecF/RecN/SMC N terminal domain AMD09_RS00415 PF00204 DNA gyrase B AMD09_RS00415 PF00986 DNA gyrase B subunit, carboxyl terminus AMD09_RS00415 PF01751 Toprim domain AMD09_RS00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS00420 PF02517 CAAX protease self-immunity AMD09_RS00425 PF01435 Peptidase family M48 AMD09_RS00430 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) AMD09_RS00435 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS00440 PF01618 AMD09_RS00440 AMD09_RS00445 PF02472 Biopolymer transport protein ExbD/TolR AMD09_RS00450 PF02472 Biopolymer transport protein ExbD/TolR AMD09_RS00455 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD09_RS00465 PF13091 PLD-like domain AMD09_RS00480 PF04055 Radical SAM superfamily AMD09_RS00485 PF13640 2OG-Fe(II) oxygenase superfamily AMD09_RS00490 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD09_RS00495 PF01694 Rhomboid family AMD09_RS00500 PF08850 AMD09_RS00500 AMD09_RS00505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD09_RS00505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD09_RS00510 PF03572 Peptidase family S41 AMD09_RS00510 PF13180 PDZ domain AMD09_RS00515 PF01551 Peptidase family M23 AMD09_RS00525 PF04389 Peptidase family M28 AMD09_RS00530 PF13670 AMD09_RS00530 AMD09_RS00535 PF00150 Cellulase (glycosyl hydrolase family 5) AMD09_RS00540 PF00150 Cellulase (glycosyl hydrolase family 5) AMD09_RS00560 PF06877 Regulator of ribonuclease activity B AMD09_RS00565 PF08212 Lipocalin-like domain AMD09_RS00570 PF04616 Glycosyl hydrolases family 43 AMD09_RS00575 PF13347 MFS/sugar transport protein AMD09_RS00580 PF00593 TonB dependent receptor AMD09_RS00580 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS00585 PF07690 Major Facilitator Superfamily AMD09_RS00590 PF00331 Glycosyl hydrolase family 10 AMD09_RS00605 PF00331 Glycosyl hydrolase family 10 AMD09_RS00610 PF02614 Glucuronate isomerase AMD09_RS00615 PF00703 Glycosyl hydrolases family 2 AMD09_RS00615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD09_RS00615 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD09_RS00615 PF16355 AMD09_RS00615 AMD09_RS00620 PF00331 Glycosyl hydrolase family 10 AMD09_RS00625 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD09_RS00630 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD09_RS00635 PF09694 AMD09_RS00635 AMD09_RS00640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD09_RS00640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD09_RS00645 PF00596 Class II Aldolase and Adducin N-terminal domain AMD09_RS00650 PF00202 Aminotransferase class-III AMD09_RS00665 PF00171 Aldehyde dehydrogenase family AMD09_RS00670 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS00675 PF01344 Kelch motif AMD09_RS00675 PF13964 Kelch motif AMD09_RS00690 PF01232 Mannitol dehydrogenase Rossmann domain AMD09_RS00690 PF08125 Mannitol dehydrogenase C-terminal domain AMD09_RS00695 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD09_RS00695 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD09_RS00695 PF07691 PA14 domain AMD09_RS00695 PF14310 Fibronectin type III-like domain AMD09_RS00700 PF04616 Glycosyl hydrolases family 43 AMD09_RS00705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD09_RS00705 PF13378 Enolase C-terminal domain-like AMD09_RS00710 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD09_RS00710 PF03629 Domain of unknown function (DUF303) AMD09_RS00715 PF03648 Glycosyl hydrolase family 67 N-terminus AMD09_RS00715 PF07477 Glycosyl hydrolase family 67 C-terminus AMD09_RS00715 PF07488 Glycosyl hydrolase family 67 middle domain AMD09_RS00720 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS00720 PF13377 Periplasmic binding protein-like domain AMD09_RS00735 PF04381 Putative exonuclease, RdgC AMD09_RS00740 PF01863 Protein of unknown function DUF45 AMD09_RS00750 PF00561 alpha/beta hydrolase fold AMD09_RS00755 PF00762 Ferrochelatase AMD09_RS00760 PF04366 AMD09_RS00760 AMD09_RS00765 PF02416 mttA/Hcf106 family AMD09_RS00770 PF02416 mttA/Hcf106 family AMD09_RS00775 PF00902 Sec-independent protein translocase protein (TatC) AMD09_RS00785 PF00117 Glutamine amidotransferase class-I AMD09_RS00795 PF00437 Type II/IV secretion system protein AMD09_RS00795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD09_RS00800 PF02091 Glycyl-tRNA synthetase alpha subunit AMD09_RS00805 PF02092 AMD09_RS00805 AMD09_RS00805 PF05746 DALR anticodon binding domain AMD09_RS00815 PF00593 TonB dependent receptor AMD09_RS00820 PF01609 Transposase DDE domain AMD09_RS00830 PF01103 Surface antigen AMD09_RS00830 PF07244 Surface antigen variable number repeat AMD09_RS00835 PF04357 AMD09_RS00835 AMD09_RS00855 PF13360 PQQ-like domain AMD09_RS00860 PF01202 Shikimate kinase AMD09_RS00865 PF13347 MFS/sugar transport protein AMD09_RS00870 PF06165 Glycosyltransferase family 36 AMD09_RS00870 PF17167 AMD09_RS00870 AMD09_RS00875 PF15979 AMD09_RS00875 AMD09_RS00885 PF00072 Response regulator receiver domain AMD09_RS00885 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS00885 PF12860 AMD09_RS00885 AMD09_RS00890 PF02659 AMD09_RS00890 AMD09_RS00895 PF01614 Bacterial transcriptional regulator AMD09_RS00895 PF09339 IclR helix-turn-helix domain AMD09_RS00900 PF07690 Major Facilitator Superfamily AMD09_RS00905 PF05336 Domain of unknown function (DUF718) AMD09_RS00915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD09_RS00915 PF13378 Enolase C-terminal domain-like AMD09_RS00920 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD09_RS00925 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS00930 PF04909 Amidohydrolase AMD09_RS00935 PF00248 Aldo/keto reductase family AMD09_RS00945 PF04616 Glycosyl hydrolases family 43 AMD09_RS00955 PF00578 AhpC/TSA family AMD09_RS00965 PF14415 Domain of unknown function (DUF4424) AMD09_RS00970 PF00072 Response regulator receiver domain AMD09_RS00970 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS00975 PF00501 AMP-binding enzyme AMD09_RS00975 PF13193 AMP-binding enzyme C-terminal domain AMD09_RS00975 PF16177 AMD09_RS00975 AMD09_RS00985 PF04341 AMD09_RS00985 AMD09_RS00990 PF00474 Sodium:solute symporter family AMD09_RS00995 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD09_RS01000 PF13616 PPIC-type PPIASE domain AMD09_RS01010 PF00480 ROK family AMD09_RS01015 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS01020 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD09_RS01025 PF04226 AMD09_RS01025 AMD09_RS01035 PF01648 4'-phosphopantetheinyl transferase superfamily AMD09_RS01040 PF09423 PhoD-like phosphatase AMD09_RS01040 PF16655 AMD09_RS01040 AMD09_RS01045 PF09423 PhoD-like phosphatase AMD09_RS01045 PF16655 AMD09_RS01045 AMD09_RS01050 PF02527 rRNA small subunit methyltransferase G AMD09_RS01055 PF05960 Bacterial protein of unknown function (DUF885) AMD09_RS01065 PF02321 Outer membrane efflux protein AMD09_RS01070 PF16576 AMD09_RS01070 AMD09_RS01075 PF00873 AcrB/AcrD/AcrF family AMD09_RS01080 PF00830 Ribosomal L28 family AMD09_RS01085 PF00471 Ribosomal protein L33 AMD09_RS01090 PF04909 Amidohydrolase AMD09_RS01095 PF04303 PrpF protein AMD09_RS01100 PF03737 Demethylmenaquinone methyltransferase AMD09_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS01105 PF03466 LysR substrate binding domain AMD09_RS01110 PF13091 PLD-like domain AMD09_RS01110 PF13396 AMD09_RS01110 AMD09_RS01120 PF13454 FAD-NAD(P)-binding AMD09_RS01125 PF00580 UvrD/REP helicase N-terminal domain AMD09_RS01125 PF13361 UvrD-like helicase C-terminal domain AMD09_RS01130 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS01130 PF12464 Maltose acetyltransferase AMD09_RS01135 PF00582 Universal stress protein family AMD09_RS01140 PF12833 Helix-turn-helix domain AMD09_RS01145 PF05591 AMD09_RS01145 AMD09_RS01150 PF05943 AMD09_RS01150 AMD09_RS01155 PF05638 Protein of unknown function (DUF796) AMD09_RS01160 PF07024 ImpE protein AMD09_RS01165 PF04965 Gene 25-like lysozyme AMD09_RS01170 PF05947 AMD09_RS01170 AMD09_RS01175 PF06996 AMD09_RS01175 AMD09_RS01180 PF00004 ATPase family associated with various cellular activities (AAA) AMD09_RS01180 PF07724 AAA domain (Cdc48 subfamily) AMD09_RS01180 PF10431 C-terminal, D2-small domain, of ClpB protein AMD09_RS01205 PF01419 Jacalin-like lectin domain AMD09_RS01210 PF00328 Histidine phosphatase superfamily (branch 2) AMD09_RS01215 PF00593 TonB dependent receptor AMD09_RS01215 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS01220 PF04773 FecR protein AMD09_RS01220 PF16220 AMD09_RS01220 AMD09_RS01220 PF16344 AMD09_RS01220 AMD09_RS01225 PF04542 Sigma-70 region 2 AMD09_RS01225 PF08281 Sigma-70, region 4 AMD09_RS01230 PF07638 ECF sigma factor AMD09_RS01235 PF00069 Protein kinase domain AMD09_RS01235 PF13374 Tetratricopeptide repeat AMD09_RS01235 PF13424 Tetratricopeptide repeat AMD09_RS01240 PF05488 PAAR motif AMD09_RS01245 PF00515 Tetratricopeptide repeat AMD09_RS01245 PF13489 Methyltransferase domain AMD09_RS01250 PF05954 Phage late control gene D protein (GPD) AMD09_RS01260 PF00498 FHA domain AMD09_RS01265 PF05936 AMD09_RS01265 AMD09_RS01270 PF00691 OmpA family AMD09_RS01270 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AMD09_RS01275 PF06744 AMD09_RS01275 AMD09_RS01275 PF06761 AMD09_RS01275 AMD09_RS01275 PF14331 AMD09_RS01275 AMD09_RS01280 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) AMD09_RS01285 PF13672 Protein phosphatase 2C AMD09_RS01290 PF00069 Protein kinase domain AMD09_RS01290 PF03781 Sulfatase-modifying factor enzyme 1 AMD09_RS01300 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD09_RS01300 PF08479 POTRA domain, ShlB-type AMD09_RS01305 PF05860 haemagglutination activity domain AMD09_RS01310 PF06812 AMD09_RS01310 AMD09_RS01315 PF11191 Protein of unknown function (DUF2782) AMD09_RS01320 PF00476 DNA polymerase family A AMD09_RS01320 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD09_RS01320 PF01612 3'-5' exonuclease AMD09_RS01320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD09_RS01325 PF01218 Coproporphyrinogen III oxidase AMD09_RS01340 PF00326 Prolyl oligopeptidase family AMD09_RS01340 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD09_RS01345 PF00501 AMP-binding enzyme AMD09_RS01360 PF04820 Tryptophan halogenase AMD09_RS01365 PF00550 Phosphopantetheine attachment site AMD09_RS01375 PF01553 Acyltransferase AMD09_RS01380 PF07977 FabA-like domain AMD09_RS01385 PF03279 AMD09_RS01385 AMD09_RS01400 PF03176 MMPL family AMD09_RS01415 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS01425 PF04820 Tryptophan halogenase AMD09_RS01425 PF13450 NAD(P)-binding Rossmann-like domain AMD09_RS01430 PF00535 Glycosyl transferase family 2 AMD09_RS01435 PF13723 AMD09_RS01435 AMD09_RS01440 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD09_RS01440 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD09_RS01445 PF05166 YcgL domain AMD09_RS01450 PF00023 Ankyrin repeat AMD09_RS01450 PF12796 Ankyrin repeats (3 copies) AMD09_RS01460 PF00723 Glycosyl hydrolases family 15 AMD09_RS01465 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD09_RS01465 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD09_RS01470 PF00999 Sodium/hydrogen exchanger family AMD09_RS01470 PF02254 TrkA-N domain AMD09_RS01475 PF00194 Eukaryotic-type carbonic anhydrase AMD09_RS01480 PF00571 CBS domain AMD09_RS01480 PF01769 Divalent cation transporter AMD09_RS01480 PF03448 MgtE intracellular N domain AMD09_RS01485 PF13302 Acetyltransferase (GNAT) domain AMD09_RS01485 PF13380 CoA binding domain AMD09_RS01485 PF13549 ATP-grasp domain AMD09_RS01485 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD09_RS01490 PF04332 AMD09_RS01490 AMD09_RS01495 PF00317 Ribonucleotide reductase, all-alpha domain AMD09_RS01495 PF02867 Ribonucleotide reductase, barrel domain AMD09_RS01500 PF00268 Ribonucleotide reductase, small chain AMD09_RS01505 PF00258 Flavodoxin AMD09_RS01510 PF00085 Thioredoxin AMD09_RS01520 PF03061 Thioesterase superfamily AMD09_RS01530 PF02558 Ketopantoate reductase PanE/ApbA AMD09_RS01530 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD09_RS01535 PF12686 AMD09_RS01535 AMD09_RS01540 PF01061 AMD09_RS01540 AMD09_RS01545 PF00005 ABC transporter AMD09_RS01550 PF00175 Oxidoreductase NAD-binding domain AMD09_RS01550 PF00970 Oxidoreductase FAD-binding domain AMD09_RS01555 PF01965 DJ-1/PfpI family AMD09_RS01555 PF12833 Helix-turn-helix domain AMD09_RS01560 PF11287 AMD09_RS01560 AMD09_RS01565 PF00593 TonB dependent receptor AMD09_RS01565 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS01575 PF01545 Cation efflux family AMD09_RS01580 PF02583 Metal-sensitive transcriptional repressor AMD09_RS01585 PF01229 Glycosyl hydrolases family 39 AMD09_RS01595 PF01381 Helix-turn-helix AMD09_RS01600 PF00561 alpha/beta hydrolase fold AMD09_RS01600 PF08386 TAP-like protein AMD09_RS01605 PF00005 ABC transporter AMD09_RS01610 PF12679 AMD09_RS01610 AMD09_RS01615 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS01620 PF04820 Tryptophan halogenase AMD09_RS01625 PF13621 Cupin-like domain AMD09_RS01630 PF07277 AMD09_RS01630 AMD09_RS01635 PF00593 TonB dependent receptor AMD09_RS01635 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS01645 PF00043 Glutathione S-transferase, C-terminal domain AMD09_RS01645 PF02798 Glutathione S-transferase, N-terminal domain AMD09_RS01650 PF00326 Prolyl oligopeptidase family AMD09_RS01650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD09_RS01655 PF05960 Bacterial protein of unknown function (DUF885) AMD09_RS01675 PF00490 Delta-aminolevulinic acid dehydratase AMD09_RS01680 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS01685 PF03466 LysR substrate binding domain AMD09_RS01690 PF01223 DNA/RNA non-specific endonuclease AMD09_RS01695 PF00175 Oxidoreductase NAD-binding domain AMD09_RS01695 PF00258 Flavodoxin AMD09_RS01695 PF03929 AMD09_RS01695 AMD09_RS01700 PF07676 WD40-like Beta Propeller Repeat AMD09_RS01705 PF01488 Shikimate / quinate 5-dehydrogenase AMD09_RS01705 PF08501 Shikimate dehydrogenase substrate binding domain AMD09_RS01720 PF13307 Helicase C-terminal domain AMD09_RS01725 PF00199 Catalase AMD09_RS01725 PF06628 Catalase-related immune-responsive AMD09_RS01730 PF12796 Ankyrin repeats (3 copies) AMD09_RS01740 PF01207 Dihydrouridine synthase (Dus) AMD09_RS01750 PF00072 Response regulator receiver domain AMD09_RS01750 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS01760 PF08811 AMD09_RS01760 AMD09_RS01765 PF07394 AMD09_RS01765 AMD09_RS01770 PF06167 Glucose-regulated metallo-peptidase M90 AMD09_RS01780 PF02237 Biotin protein ligase C terminal domain AMD09_RS01780 PF03099 Biotin/lipoate A/B protein ligase family AMD09_RS01780 PF08279 HTH domain AMD09_RS01785 PF03309 Type III pantothenate kinase AMD09_RS01790 PF05036 Sporulation related domain AMD09_RS01800 PF02223 Thymidylate kinase AMD09_RS01820 PF03259 Roadblock/LC7 domain AMD09_RS01825 PF00491 Arginase family AMD09_RS01830 PF08085 AMD09_RS01830 AMD09_RS01835 PF08085 AMD09_RS01835 AMD09_RS01840 PF05532 CsbD-like AMD09_RS01845 PF00579 tRNA synthetases class I (W and Y) AMD09_RS01845 PF07411 Domain of unknown function (DUF1508) AMD09_RS01850 PF00753 Metallo-beta-lactamase superfamily AMD09_RS01855 PF02225 PA domain AMD09_RS01855 PF04389 Peptidase family M28 AMD09_RS01865 PF00892 EamA-like transporter family AMD09_RS01870 PF00892 EamA-like transporter family AMD09_RS01875 PF12697 Alpha/beta hydrolase family AMD09_RS01880 PF02687 AMD09_RS01880 AMD09_RS01880 PF12704 MacB-like periplasmic core domain AMD09_RS01885 PF02687 AMD09_RS01885 AMD09_RS01885 PF12704 MacB-like periplasmic core domain AMD09_RS01890 PF00005 ABC transporter AMD09_RS01895 PF16576 AMD09_RS01895 AMD09_RS01900 PF07730 Histidine kinase AMD09_RS01905 PF00072 Response regulator receiver domain AMD09_RS01905 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS01910 PF06283 Trehalose utilisation AMD09_RS01915 PF01292 Prokaryotic cytochrome b561 AMD09_RS01920 PF00199 Catalase AMD09_RS01925 PF04542 Sigma-70 region 2 AMD09_RS01925 PF08281 Sigma-70, region 4 AMD09_RS01935 PF00883 Cytosol aminopeptidase family, catalytic domain AMD09_RS01940 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS01945 PF01594 AMD09_RS01945 AMD09_RS01965 PF13180 PDZ domain AMD09_RS01965 PF13365 Trypsin-like peptidase domain AMD09_RS01975 PF11769 AMD09_RS01975 AMD09_RS01985 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS01985 PF00672 HAMP domain AMD09_RS01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS01990 PF00072 Response regulator receiver domain AMD09_RS01990 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS01995 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS01995 PF08338 Domain of unknown function (DUF1731) AMD09_RS02000 PF13628 AMD09_RS02000 AMD09_RS02020 PF11379 AMD09_RS02020 AMD09_RS02025 PF00326 Prolyl oligopeptidase family AMD09_RS02035 PF01139 tRNA-splicing ligase RtcB AMD09_RS02040 PF01145 SPFH domain / Band 7 family AMD09_RS02055 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS02060 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD09_RS02060 PF00175 Oxidoreductase NAD-binding domain AMD09_RS02060 PF00970 Oxidoreductase FAD-binding domain AMD09_RS02065 PF00487 AMD09_RS02065 AMD09_RS02070 PF00563 EAL domain AMD09_RS02070 PF12792 AMD09_RS02070 AMD09_RS02080 PF08212 Lipocalin-like domain AMD09_RS02085 PF01078 Magnesium chelatase, subunit ChlI AMD09_RS02085 PF13335 AMD09_RS02085 AMD09_RS02085 PF13541 Subunit ChlI of Mg-chelatase AMD09_RS02090 PF04380 AMD09_RS02090 AMD09_RS02095 PF00543 Nitrogen regulatory protein P-II AMD09_RS02100 PF02838 Glycosyl hydrolase family 20, domain 2 AMD09_RS02100 PF07555 beta-N-acetylglucosaminidase AMD09_RS02110 PF13505 Outer membrane protein beta-barrel domain AMD09_RS02120 PF09851 AMD09_RS02120 AMD09_RS02120 PF14470 Bacterial PH domain AMD09_RS02125 PF01564 Spermine/spermidine synthase AMD09_RS02130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD09_RS02130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD09_RS02140 PF00501 AMP-binding enzyme AMD09_RS02140 PF00550 Phosphopantetheine attachment site AMD09_RS02140 PF00668 Condensation domain AMD09_RS02140 PF00975 Thioesterase domain AMD09_RS02140 PF13193 AMP-binding enzyme C-terminal domain AMD09_RS02145 PF03033 Glycosyltransferase family 28 N-terminal domain AMD09_RS02150 PF01757 AMD09_RS02150 AMD09_RS02155 PF00106 short chain dehydrogenase AMD09_RS02165 PF05036 Sporulation related domain AMD09_RS02170 PF00750 tRNA synthetases class I (R) AMD09_RS02170 PF03485 Arginyl tRNA synthetase N terminal domain AMD09_RS02170 PF05746 DALR anticodon binding domain AMD09_RS02175 PF04002 RadC-like JAB domain AMD09_RS02180 PF02441 Flavoprotein AMD09_RS02180 PF04127 DNA / pantothenate metabolism flavoprotein AMD09_RS02185 PF00692 dUTPase AMD09_RS02190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD09_RS02190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD09_RS02190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD09_RS02190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD09_RS02200 PF07578 Lipid A Biosynthesis N-terminal domain AMD09_RS02205 PF00535 Glycosyl transferase family 2 AMD09_RS02210 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS02215 PF11731 AMD09_RS02215 AMD09_RS02220 PF02195 ParB-like nuclease domain AMD09_RS02225 PF13614 AAA domain AMD09_RS02235 PF00156 Phosphoribosyl transferase domain AMD09_RS02240 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS02245 PF07690 Major Facilitator Superfamily AMD09_RS02255 PF03702 Uncharacterised protein family (UPF0075) AMD09_RS02260 PF01551 Peptidase family M23 AMD09_RS02260 PF04225 Opacity-associated protein A LysM-like domain AMD09_RS02265 PF00579 tRNA synthetases class I (W and Y) AMD09_RS02295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD09_RS02295 PF06827 Zinc finger found in FPG and IleRS AMD09_RS02295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD09_RS02300 PF14315 AMD09_RS02300 AMD09_RS02305 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD09_RS02310 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS02310 PF01590 GAF domain AMD09_RS02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS02315 PF00265 Thymidine kinase AMD09_RS02320 PF00580 UvrD/REP helicase N-terminal domain AMD09_RS02320 PF13361 UvrD-like helicase C-terminal domain AMD09_RS02325 PF13302 Acetyltransferase (GNAT) domain AMD09_RS02330 PF14094 AMD09_RS02330 AMD09_RS02340 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD09_RS02345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD09_RS02350 PF04820 Tryptophan halogenase AMD09_RS02365 PF13620 Carboxypeptidase regulatory-like domain AMD09_RS02370 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS02370 PF13377 Periplasmic binding protein-like domain AMD09_RS02380 PF01553 Acyltransferase AMD09_RS02385 PF00107 Zinc-binding dehydrogenase AMD09_RS02385 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS02390 PF04325 Protein of unknown function (DUF465) AMD09_RS02400 PF00665 Integrase core domain AMD09_RS02400 PF13936 Helix-turn-helix domain AMD09_RS02405 PF01695 IstB-like ATP binding protein AMD09_RS02410 PF00150 Cellulase (glycosyl hydrolase family 5) AMD09_RS02415 PF00107 Zinc-binding dehydrogenase AMD09_RS02415 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS02420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS02420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD09_RS02425 PF00310 Glutamine amidotransferases class-II AMD09_RS02425 PF01493 GXGXG motif AMD09_RS02425 PF01645 Conserved region in glutamate synthase AMD09_RS02425 PF04898 Glutamate synthase central domain AMD09_RS02430 PF11720 Peptidase inhibitor I78 family AMD09_RS02435 PF01028 Eukaryotic DNA topoisomerase I, catalytic core AMD09_RS02450 PF05368 NmrA-like family AMD09_RS02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS02455 PF03466 LysR substrate binding domain AMD09_RS02460 PF00534 Glycosyl transferases group 1 AMD09_RS02460 PF13439 Glycosyltransferase Family 4 AMD09_RS02465 PF00534 Glycosyl transferases group 1 AMD09_RS02465 PF13439 Glycosyltransferase Family 4 AMD09_RS02470 PF13727 CoA-binding domain AMD09_RS02475 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD09_RS02480 PF04932 AMD09_RS02480 AMD09_RS02485 PF03808 AMD09_RS02485 AMD09_RS02490 PF13439 Glycosyltransferase Family 4 AMD09_RS02490 PF13692 Glycosyl transferases group 1 AMD09_RS02505 PF13489 Methyltransferase domain AMD09_RS02520 PF05711 Macrocin-O-methyltransferase (TylF) AMD09_RS02525 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS02535 PF01943 AMD09_RS02535 AMD09_RS02535 PF14667 Polysaccharide biosynthesis C-terminal domain AMD09_RS02540 PF00005 ABC transporter AMD09_RS02540 PF00664 ABC transporter transmembrane region AMD09_RS02545 PF13471 AMD09_RS02545 AMD09_RS02560 PF13847 Methyltransferase domain AMD09_RS02565 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD09_RS02575 PF00685 Sulfotransferase domain AMD09_RS02580 PF13673 Acetyltransferase (GNAT) domain AMD09_RS02585 PF07484 Phage Tail Collar Domain AMD09_RS02590 PF07484 Phage Tail Collar Domain AMD09_RS02595 PF07484 Phage Tail Collar Domain AMD09_RS02600 PF14907 Uncharacterised nucleotidyltransferase AMD09_RS02605 PF03965 Penicillinase repressor AMD09_RS02610 PF05569 BlaR1 peptidase M56 AMD09_RS02620 PF03435 Saccharopine dehydrogenase AMD09_RS02625 PF08975 Domain of unknown function (DUF1868) AMD09_RS02630 PF00593 TonB dependent receptor AMD09_RS02630 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS02635 PF00480 ROK family AMD09_RS02640 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD09_RS02645 PF13482 RNase_H superfamily AMD09_RS02650 PF00270 DEAD/DEAH box helicase AMD09_RS02650 PF00271 Helicase conserved C-terminal domain AMD09_RS02650 PF09369 AMD09_RS02650 AMD09_RS02655 PF03006 AMD09_RS02655 AMD09_RS02660 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD09_RS02665 PF05016 Plasmid stabilisation system protein AMD09_RS02670 PF00106 short chain dehydrogenase AMD09_RS02675 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS02680 PF03466 LysR substrate binding domain AMD09_RS02685 PF14305 AMD09_RS02685 AMD09_RS02695 PF02525 Flavodoxin-like fold AMD09_RS02700 PF01527 Transposase AMD09_RS02710 PF13333 AMD09_RS02710 AMD09_RS02720 PF01609 Transposase DDE domain AMD09_RS02755 PF05532 CsbD-like AMD09_RS02760 PF08668 HDOD domain AMD09_RS02765 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD09_RS02775 PF01447 Thermolysin metallopeptidase, catalytic domain AMD09_RS02775 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD09_RS02780 PF13460 NADH(P)-binding AMD09_RS02785 PF00293 NUDIX domain AMD09_RS02790 PF01435 Peptidase family M48 AMD09_RS02800 PF10116 AMD09_RS02800 AMD09_RS02805 PF00085 Thioredoxin AMD09_RS02815 PF00083 Sugar (and other) transporter AMD09_RS02820 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD09_RS02825 PF12787 AMD09_RS02825 AMD09_RS02830 PF06080 AMD09_RS02830 AMD09_RS02845 PF07584 AMD09_RS02845 AMD09_RS02850 PF01882 AMD09_RS02850 AMD09_RS02855 PF07726 ATPase family associated with various cellular activities (AAA) AMD09_RS02860 PF13709 Domain of unknown function (DUF4159) AMD09_RS02865 PF01523 Putative modulator of DNA gyrase AMD09_RS02870 PF01523 Putative modulator of DNA gyrase AMD09_RS02875 PF01523 Putative modulator of DNA gyrase AMD09_RS02885 PF00316 Fructose-1-6-bisphosphatase AMD09_RS02890 PF00155 Aminotransferase class I and II AMD09_RS02895 PF00593 TonB dependent receptor AMD09_RS02895 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS02905 PF07883 Cupin domain AMD09_RS02910 PF00171 Aldehyde dehydrogenase family AMD09_RS02915 PF05610 AMD09_RS02915 AMD09_RS02930 PF02735 Ku70/Ku80 beta-barrel domain AMD09_RS02935 PF01070 FMN-dependent dehydrogenase AMD09_RS02945 PF00144 Beta-lactamase AMD09_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS02950 PF07730 Histidine kinase AMD09_RS02955 PF00072 Response regulator receiver domain AMD09_RS02955 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS02975 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS02975 PF13191 AAA ATPase domain AMD09_RS02980 PF07055 Enoyl reductase FAD binding domain AMD09_RS02980 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD09_RS02980 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD09_RS02990 PF00294 pfkB family carbohydrate kinase AMD09_RS02995 PF00593 TonB dependent receptor AMD09_RS02995 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS03000 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD09_RS03015 PF13619 AMD09_RS03015 AMD09_RS03020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMD09_RS03045 PF01527 Transposase AMD09_RS03050 PF00665 Integrase core domain AMD09_RS03050 PF13276 AMD09_RS03050 AMD09_RS03055 PF00128 Alpha amylase, catalytic domain AMD09_RS03055 PF11896 Domain of unknown function (DUF3416) AMD09_RS03060 PF00128 Alpha amylase, catalytic domain AMD09_RS03060 PF16657 AMD09_RS03060 AMD09_RS03065 PF00128 Alpha amylase, catalytic domain AMD09_RS03065 PF02806 Alpha amylase, C-terminal all-beta domain AMD09_RS03065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD09_RS03070 PF12850 Calcineurin-like phosphoesterase superfamily domain AMD09_RS03075 PF00248 Aldo/keto reductase family AMD09_RS03080 PF00135 Carboxylesterase family AMD09_RS03085 PF07859 alpha/beta hydrolase fold AMD09_RS03095 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD09_RS03100 PF04290 AMD09_RS03100 AMD09_RS03105 PF06808 AMD09_RS03105 AMD09_RS03110 PF04616 Glycosyl hydrolases family 43 AMD09_RS03115 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS03115 PF13377 Periplasmic binding protein-like domain AMD09_RS03120 PF04962 KduI/IolB family AMD09_RS03125 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS03130 PF02502 Ribose/Galactose Isomerase AMD09_RS03130 PF12408 Ribose-5-phosphate isomerase AMD09_RS03135 PF07883 Cupin domain AMD09_RS03135 PF13472 GDSL-like Lipase/Acylhydrolase family AMD09_RS03145 PF14300 Domain of unknown function (DUF4375) AMD09_RS03150 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD09_RS03155 PF01037 AsnC family AMD09_RS03155 PF13404 AsnC-type helix-turn-helix domain AMD09_RS03160 PF00593 TonB dependent receptor AMD09_RS03160 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS03165 PF01734 Patatin-like phospholipase AMD09_RS03170 PF01987 Mitochondrial biogenesis AIM24 AMD09_RS03175 PF00005 ABC transporter AMD09_RS03180 PF00487 AMD09_RS03180 AMD09_RS03185 PF13202 EF hand AMD09_RS03190 PF00005 ABC transporter AMD09_RS03195 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS03195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMD09_RS03200 PF00266 Aminotransferase class-V AMD09_RS03205 PF03781 Sulfatase-modifying factor enzyme 1 AMD09_RS03205 PF12867 DinB superfamily AMD09_RS03210 PF10017 AMD09_RS03210 AMD09_RS03215 PF11625 Protein of unknown function (DUF3253) AMD09_RS03220 PF07805 HipA-like N-terminal domain AMD09_RS03220 PF13657 HipA N-terminal domain AMD09_RS03225 PF13560 Helix-turn-helix domain AMD09_RS03230 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMD09_RS03240 PF03547 AMD09_RS03240 AMD09_RS03250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD09_RS03255 PF00300 Histidine phosphatase superfamily (branch 1) AMD09_RS03260 PF04264 YceI-like domain AMD09_RS03265 PF13091 PLD-like domain AMD09_RS03270 PF03061 Thioesterase superfamily AMD09_RS03275 PF01553 Acyltransferase AMD09_RS03280 PF12146 Putative lysophospholipase AMD09_RS03290 PF13432 Tetratricopeptide repeat AMD09_RS03295 PF01161 Phosphatidylethanolamine-binding protein AMD09_RS03300 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS03305 PF03724 META domain AMD09_RS03305 PF14302 AMD09_RS03305 AMD09_RS03310 PF02673 AMD09_RS03310 AMD09_RS03315 PF00120 Glutamine synthetase, catalytic domain AMD09_RS03315 PF03951 Glutamine synthetase, beta-Grasp domain AMD09_RS03320 PF00543 Nitrogen regulatory protein P-II AMD09_RS03325 PF00909 Ammonium Transporter Family AMD09_RS03330 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS03335 PF00072 Response regulator receiver domain AMD09_RS03335 PF00158 Sigma-54 interaction domain AMD09_RS03335 PF02954 Bacterial regulatory protein, Fis family AMD09_RS03340 PF00080 Copper/zinc superoxide dismutase (SODC) AMD09_RS03345 PF00080 Copper/zinc superoxide dismutase (SODC) AMD09_RS03360 PF00108 Thiolase, N-terminal domain AMD09_RS03360 PF02803 Thiolase, C-terminal domain AMD09_RS03365 PF07219 AMD09_RS03365 AMD09_RS03370 PF04375 AMD09_RS03370 AMD09_RS03375 PF02602 Uroporphyrinogen-III synthase HemD AMD09_RS03380 PF01755 AMD09_RS03380 AMD09_RS03385 PF09500 Putative thioesterase (yiiD_Cterm) AMD09_RS03395 PF00581 Rhodanese-like domain AMD09_RS03400 PF02556 Preprotein translocase subunit SecB AMD09_RS03405 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD09_RS03405 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD09_RS03410 PF13505 Outer membrane protein beta-barrel domain AMD09_RS03415 PF00205 Thiamine pyrophosphate enzyme, central domain AMD09_RS03415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD09_RS03415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD09_RS03420 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS03425 PF00072 Response regulator receiver domain AMD09_RS03425 PF00158 Sigma-54 interaction domain AMD09_RS03425 PF02954 Bacterial regulatory protein, Fis family AMD09_RS03440 PF07690 Major Facilitator Superfamily AMD09_RS03445 PF00588 SpoU rRNA Methylase family AMD09_RS03455 PF13698 AMD09_RS03455 AMD09_RS03460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD09_RS03460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD09_RS03470 PF00561 alpha/beta hydrolase fold AMD09_RS03475 PF03692 AMD09_RS03475 AMD09_RS03480 PF00501 AMP-binding enzyme AMD09_RS03485 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD09_RS03490 PF07043 AMD09_RS03490 AMD09_RS03500 PF01820 D-ala D-ala ligase N-terminus AMD09_RS03505 PF02036 SCP-2 sterol transfer family AMD09_RS03510 PF03109 AMD09_RS03510 AMD09_RS03515 PF07883 Cupin domain AMD09_RS03520 PF00849 RNA pseudouridylate synthase AMD09_RS03525 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) AMD09_RS03530 PF00472 RF-1 domain AMD09_RS03535 PF01553 Acyltransferase AMD09_RS03540 PF01112 Asparaginase AMD09_RS03545 PF01432 Peptidase family M3 AMD09_RS03550 PF12706 Beta-lactamase superfamily domain AMD09_RS03560 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS03560 PF14246 AefR-like transcriptional repressor, C-terminal region AMD09_RS03565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS03570 PF12833 Helix-turn-helix domain AMD09_RS03575 PF00999 Sodium/hydrogen exchanger family AMD09_RS03580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS03580 PF03466 LysR substrate binding domain AMD09_RS03585 PF01274 Malate synthase AMD09_RS03595 PF00027 Cyclic nucleotide-binding domain AMD09_RS03595 PF00990 GGDEF domain AMD09_RS03600 PF13174 Tetratricopeptide repeat AMD09_RS03600 PF14559 Tetratricopeptide repeat AMD09_RS03610 PF00881 Nitroreductase family AMD09_RS03615 PF00326 Prolyl oligopeptidase family AMD09_RS03620 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD09_RS03620 PF00364 Biotin-requiring enzyme AMD09_RS03620 PF02785 Biotin carboxylase C-terminal domain AMD09_RS03620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD09_RS03625 PF01039 Carboxyl transferase domain AMD09_RS03630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS03630 PF02770 Acyl-CoA dehydrogenase, middle domain AMD09_RS03630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD09_RS03635 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS03645 PF08808 AMD09_RS03645 AMD09_RS03650 PF11804 AMD09_RS03650 AMD09_RS03655 PF03929 AMD09_RS03655 AMD09_RS03660 PF12365 AMD09_RS03660 AMD09_RS03670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD09_RS03675 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS03680 PF03203 AMD09_RS03680 AMD09_RS03685 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD09_RS03685 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD09_RS03705 PF12146 Putative lysophospholipase AMD09_RS03710 PF03969 AFG1-like ATPase AMD09_RS03715 PF01047 MarR family AMD09_RS03720 PF02566 OsmC-like protein AMD09_RS03730 PF12697 Alpha/beta hydrolase family AMD09_RS03735 PF11101 AMD09_RS03735 AMD09_RS03750 PF00107 Zinc-binding dehydrogenase AMD09_RS03750 PF16884 AMD09_RS03750 AMD09_RS03755 PF00248 Aldo/keto reductase family AMD09_RS03765 PF00849 RNA pseudouridylate synthase AMD09_RS03780 PF00271 Helicase conserved C-terminal domain AMD09_RS03780 PF04408 Helicase associated domain (HA2) AMD09_RS03780 PF08482 AMD09_RS03780 AMD09_RS03790 PF07308 AMD09_RS03790 AMD09_RS03795 PF00576 HIUase/Transthyretin family AMD09_RS03800 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS03805 PF09349 OHCU decarboxylase AMD09_RS03810 PF11533 Protein of unknown function (DUF3225) AMD09_RS03815 PF01522 Polysaccharide deacetylase AMD09_RS03820 PF00266 Aminotransferase class-V AMD09_RS03825 PF01546 Peptidase family M20/M25/M40 AMD09_RS03825 PF07687 Peptidase dimerisation domain AMD09_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS03830 PF03466 LysR substrate binding domain AMD09_RS03835 PF07690 Major Facilitator Superfamily AMD09_RS03845 PF01019 Gamma-glutamyltranspeptidase AMD09_RS03850 PF01425 Amidase AMD09_RS03855 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD09_RS03860 PF00962 Adenosine/AMP deaminase AMD09_RS03865 PF00860 Permease family AMD09_RS03875 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD09_RS03875 PF00970 Oxidoreductase FAD-binding domain AMD09_RS03880 PF00355 Rieske [2Fe-2S] domain AMD09_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS03885 PF03466 LysR substrate binding domain AMD09_RS03890 PF01026 TatD related DNase AMD09_RS03905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS03905 PF03466 LysR substrate binding domain AMD09_RS03910 PF07690 Major Facilitator Superfamily AMD09_RS03915 PF13411 MerR HTH family regulatory protein AMD09_RS03920 PF12697 Alpha/beta hydrolase family AMD09_RS03925 PF02146 Sir2 family AMD09_RS03930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD09_RS03935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD09_RS03935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD09_RS03945 PF00551 Formyl transferase AMD09_RS03945 PF01842 ACT domain AMD09_RS03950 PF00072 Response regulator receiver domain AMD09_RS03950 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS03955 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS03955 PF00672 HAMP domain AMD09_RS03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS03960 PF16576 AMD09_RS03960 AMD09_RS03965 PF00873 AcrB/AcrD/AcrF family AMD09_RS03970 PF02321 Outer membrane efflux protein AMD09_RS03980 PF02219 Methylenetetrahydrofolate reductase AMD09_RS03985 PF02677 AMD09_RS03985 AMD09_RS03990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS03990 PF03466 LysR substrate binding domain AMD09_RS03995 PF03358 NADPH-dependent FMN reductase AMD09_RS04000 PF08908 AMD09_RS04000 AMD09_RS04005 PF01717 Cobalamin-independent synthase, Catalytic domain AMD09_RS04010 PF03812 AMD09_RS04010 AMD09_RS04015 PF07396 Phosphate-selective porin O and P AMD09_RS04020 PF05368 NmrA-like family AMD09_RS04025 PF01638 HxlR-like helix-turn-helix AMD09_RS04050 PF00665 Integrase core domain AMD09_RS04050 PF13276 AMD09_RS04050 AMD09_RS04055 PF01527 Transposase AMD09_RS04060 PF00589 Phage integrase family AMD09_RS04065 PF00920 Dehydratase family AMD09_RS04070 PF00150 Cellulase (glycosyl hydrolase family 5) AMD09_RS04085 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS04095 PF07690 Major Facilitator Superfamily AMD09_RS04100 PF11871 AMD09_RS04100 AMD09_RS04100 PF13487 HD domain AMD09_RS04105 PF12802 MarR family AMD09_RS04110 PF13557 AMD09_RS04110 AMD09_RS04115 PF00106 short chain dehydrogenase AMD09_RS04115 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS04120 PF00171 Aldehyde dehydrogenase family AMD09_RS04125 PF02311 AraC-like ligand binding domain AMD09_RS04125 PF12833 Helix-turn-helix domain AMD09_RS04130 PF01494 FAD binding domain AMD09_RS04135 PF12680 SnoaL-like domain AMD09_RS04140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD09_RS04140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD09_RS04145 PF00230 Major intrinsic protein AMD09_RS04150 PF01266 FAD dependent oxidoreductase AMD09_RS04150 PF16901 AMD09_RS04150 AMD09_RS04155 PF00455 AMD09_RS04155 AMD09_RS04155 PF08220 DeoR-like helix-turn-helix domain AMD09_RS04160 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD09_RS04160 PF00175 Oxidoreductase NAD-binding domain AMD09_RS04160 PF00970 Oxidoreductase FAD-binding domain AMD09_RS04165 PF00355 Rieske [2Fe-2S] domain AMD09_RS04170 PF01144 Coenzyme A transferase AMD09_RS04175 PF01144 Coenzyme A transferase AMD09_RS04180 PF00108 Thiolase, N-terminal domain AMD09_RS04180 PF02803 Thiolase, C-terminal domain AMD09_RS04185 PF00775 Dioxygenase AMD09_RS04185 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD09_RS04190 PF00775 Dioxygenase AMD09_RS04195 PF00206 Lyase AMD09_RS04195 PF10397 Adenylosuccinate lyase C-terminus AMD09_RS04200 PF00561 alpha/beta hydrolase fold AMD09_RS04205 PF02627 Carboxymuconolactone decarboxylase family AMD09_RS04210 PF12146 Putative lysophospholipase AMD09_RS04215 PF01614 Bacterial transcriptional regulator AMD09_RS04215 PF09339 IclR helix-turn-helix domain AMD09_RS04220 PF01163 RIO1 family AMD09_RS04225 PF07859 alpha/beta hydrolase fold AMD09_RS04230 PF10677 AMD09_RS04230 AMD09_RS04235 PF01134 Glucose inhibited division protein A AMD09_RS04235 PF13932 GidA associated domain 3 AMD09_RS04245 PF00291 Pyridoxal-phosphate dependent enzyme AMD09_RS04250 PF02698 DUF218 domain AMD09_RS04255 PF12680 SnoaL-like domain AMD09_RS04260 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AMD09_RS04265 PF08241 Methyltransferase domain AMD09_RS04270 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS04275 PF12697 Alpha/beta hydrolase family AMD09_RS04285 PF00155 Aminotransferase class I and II AMD09_RS04290 PF04055 Radical SAM superfamily AMD09_RS04290 PF06968 Biotin and Thiamin Synthesis associated domain AMD09_RS04295 PF00156 Phosphoribosyl transferase domain AMD09_RS04300 PF01040 UbiA prenyltransferase family AMD09_RS04315 PF05819 AMD09_RS04315 AMD09_RS04325 PF05932 Tir chaperone protein (CesT) family AMD09_RS04350 PF01313 AMD09_RS04350 AMD09_RS04355 PF00813 AMD09_RS04355 AMD09_RS04360 PF01052 Surface presentation of antigens (SPOA) AMD09_RS04365 PF09483 AMD09_RS04365 AMD09_RS04370 PF00771 FHIPEP family AMD09_RS04375 PF01312 FlhB HrpN YscU SpaS Family AMD09_RS04380 PF09613 AMD09_RS04380 AMD09_RS04385 PF09487 AMD09_RS04385 AMD09_RS04390 PF01514 Secretory protein of YscJ/FliF family AMD09_RS04395 PF09502 AMD09_RS04395 AMD09_RS04400 PF02108 AMD09_RS04400 AMD09_RS04405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD09_RS04405 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD09_RS04410 PF09486 AMD09_RS04410 AMD09_RS04415 PF01311 AMD09_RS04415 AMD09_RS04420 PF00263 AMD09_RS04420 AMD09_RS04420 PF03958 Bacterial type II/III secretion system short domain AMD09_RS04430 PF01464 Transglycosylase SLT domain AMD09_RS04440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD09_RS04445 PF00924 Mechanosensitive ion channel AMD09_RS04445 PF12607 AMD09_RS04445 AMD09_RS04450 PF00884 Sulfatase AMD09_RS04460 PF05661 AMD09_RS04460 AMD09_RS04465 PF00990 GGDEF domain AMD09_RS04470 PF00534 Glycosyl transferases group 1 AMD09_RS04470 PF08323 Starch synthase catalytic domain AMD09_RS04475 PF00128 Alpha amylase, catalytic domain AMD09_RS04475 PF02806 Alpha amylase, C-terminal all-beta domain AMD09_RS04475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD09_RS04480 PF00128 Alpha amylase, catalytic domain AMD09_RS04480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD09_RS04480 PF11941 Domain of unknown function (DUF3459) AMD09_RS04485 PF02446 4-alpha-glucanotransferase AMD09_RS04490 PF00128 Alpha amylase, catalytic domain AMD09_RS04495 PF11154 AMD09_RS04495 AMD09_RS04500 PF00128 Alpha amylase, catalytic domain AMD09_RS04500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD09_RS04505 PF13460 NADH(P)-binding AMD09_RS04510 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS04515 PF00890 FAD binding domain AMD09_RS04515 PF13454 FAD-NAD(P)-binding AMD09_RS04525 PF06903 AMD09_RS04525 AMD09_RS04530 PF02321 Outer membrane efflux protein AMD09_RS04535 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS04540 PF16576 AMD09_RS04540 AMD09_RS04545 PF00873 AcrB/AcrD/AcrF family AMD09_RS04550 PF00106 short chain dehydrogenase AMD09_RS04560 PF00270 DEAD/DEAH box helicase AMD09_RS04560 PF00271 Helicase conserved C-terminal domain AMD09_RS04565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD09_RS04565 PF00364 Biotin-requiring enzyme AMD09_RS04565 PF02817 e3 binding domain AMD09_RS04570 PF07653 Variant SH3 domain AMD09_RS04575 PF02779 Transketolase, pyrimidine binding domain AMD09_RS04575 PF02780 Transketolase, C-terminal domain AMD09_RS04580 PF00676 Dehydrogenase E1 component AMD09_RS04585 PF00932 Lamin Tail Domain AMD09_RS04585 PF03160 Calx-beta domain AMD09_RS04585 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS04590 PF03301 Tryptophan 2,3-dioxygenase AMD09_RS04595 PF00854 POT family AMD09_RS04600 PF13899 Thioredoxin-like AMD09_RS04605 PF12802 MarR family AMD09_RS04610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS04610 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AMD09_RS04615 PF04209 homogentisate 1,2-dioxygenase AMD09_RS04630 PF03334 AMD09_RS04630 AMD09_RS04635 PF04066 AMD09_RS04635 AMD09_RS04640 PF01899 AMD09_RS04640 AMD09_RS04645 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD09_RS04650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD09_RS04655 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD09_RS04655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD09_RS04655 PF04039 AMD09_RS04655 AMD09_RS04655 PF13244 AMD09_RS04655 AMD09_RS04660 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS04665 PF06127 AMD09_RS04665 AMD09_RS04670 PF01447 Thermolysin metallopeptidase, catalytic domain AMD09_RS04670 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD09_RS04670 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD09_RS04675 PF00182 Chitinase class I AMD09_RS04675 PF01471 Putative peptidoglycan binding domain AMD09_RS04675 PF01551 Peptidase family M23 AMD09_RS04695 PF01259 SAICAR synthetase AMD09_RS04700 PF00226 DnaJ domain AMD09_RS04705 PF13505 Outer membrane protein beta-barrel domain AMD09_RS04710 PF00834 Ribulose-phosphate 3 epimerase family AMD09_RS04715 PF00583 Acetyltransferase (GNAT) family AMD09_RS04720 PF00781 Diacylglycerol kinase catalytic domain AMD09_RS04725 PF00425 chorismate binding enzyme AMD09_RS04725 PF04715 Anthranilate synthase component I, N terminal region AMD09_RS04730 PF01212 Beta-eliminating lyase AMD09_RS04735 PF00117 Glutamine amidotransferase class-I AMD09_RS04740 PF01613 Flavin reductase like domain AMD09_RS04745 PF00591 Glycosyl transferase family, a/b domain AMD09_RS04745 PF02885 Glycosyl transferase family, helical bundle domain AMD09_RS04750 PF00218 Indole-3-glycerol phosphate synthase AMD09_RS04755 PF12710 haloacid dehalogenase-like hydrolase AMD09_RS04760 PF00027 Cyclic nucleotide-binding domain AMD09_RS04760 PF00325 Bacterial regulatory proteins, crp family AMD09_RS04765 PF02675 S-adenosylmethionine decarboxylase AMD09_RS04770 PF00893 Small Multidrug Resistance protein AMD09_RS04775 PF03232 AMD09_RS04775 AMD09_RS04780 PF00572 Ribosomal protein L13 AMD09_RS04785 PF00380 Ribosomal protein S9/S16 AMD09_RS04800 PF00293 NUDIX domain AMD09_RS04805 PF04324 BFD-like [2Fe-2S] binding domain AMD09_RS04810 PF00210 Ferritin-like domain AMD09_RS04815 PF00072 Response regulator receiver domain AMD09_RS04815 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS04815 PF01627 Hpt domain AMD09_RS04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS04820 PF00072 Response regulator receiver domain AMD09_RS04820 PF00563 EAL domain AMD09_RS04820 PF00990 GGDEF domain AMD09_RS04825 PF13548 AMD09_RS04825 AMD09_RS04835 PF04519 AMD09_RS04835 AMD09_RS04840 PF01521 Iron-sulphur cluster biosynthesis AMD09_RS04850 PF03583 Secretory lipase AMD09_RS04855 PF00293 NUDIX domain AMD09_RS04855 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD09_RS04855 PF09297 NADH pyrophosphatase zinc ribbon domain AMD09_RS04860 PF03186 AMD09_RS04860 AMD09_RS04865 PF10825 AMD09_RS04865 AMD09_RS04870 PF04505 AMD09_RS04870 AMD09_RS04880 PF01553 Acyltransferase AMD09_RS04880 PF07690 Major Facilitator Superfamily AMD09_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS04885 PF03466 LysR substrate binding domain AMD09_RS04890 PF07690 Major Facilitator Superfamily AMD09_RS04895 PF12805 AMD09_RS04895 AMD09_RS04895 PF13515 AMD09_RS04895 AMD09_RS04905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD09_RS04905 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD09_RS04905 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD09_RS04915 PF01808 AICARFT/IMPCHase bienzyme AMD09_RS04915 PF02142 MGS-like domain AMD09_RS04920 PF01066 CDP-alcohol phosphatidyltransferase AMD09_RS04925 PF12146 Putative lysophospholipase AMD09_RS04925 PF12147 AMD09_RS04925 AMD09_RS04930 PF00782 Dual specificity phosphatase, catalytic domain AMD09_RS04945 PF01066 CDP-alcohol phosphatidyltransferase AMD09_RS04950 PF01553 Acyltransferase AMD09_RS04955 PF01148 Cytidylyltransferase family AMD09_RS04960 PF02954 Bacterial regulatory protein, Fis family AMD09_RS04965 PF11906 AMD09_RS04965 AMD09_RS04975 PF01381 Helix-turn-helix AMD09_RS04985 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AMD09_RS05005 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD09_RS05005 PF02785 Biotin carboxylase C-terminal domain AMD09_RS05005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD09_RS05010 PF05635 23S rRNA-intervening sequence protein AMD09_RS05015 PF00364 Biotin-requiring enzyme AMD09_RS05020 PF01220 Dehydroquinase class II AMD09_RS05025 PF02683 AMD09_RS05025 AMD09_RS05025 PF11412 Disulphide bond corrector protein DsbC AMD09_RS05025 PF13899 Thioredoxin-like AMD09_RS05030 PF03091 CutA1 divalent ion tolerance protein AMD09_RS05035 PF12625 AMD09_RS05035 AMD09_RS05035 PF12833 Helix-turn-helix domain AMD09_RS05045 PF01852 START domain AMD09_RS05055 PF00106 short chain dehydrogenase AMD09_RS05060 PF00932 Lamin Tail Domain AMD09_RS05060 PF04231 Endonuclease I AMD09_RS05060 PF13205 Bacterial Ig-like domain AMD09_RS05065 PF00166 Chaperonin 10 Kd subunit AMD09_RS05070 PF00118 TCP-1/cpn60 chaperonin family AMD09_RS05080 PF00593 TonB dependent receptor AMD09_RS05080 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS05085 PF00793 DAHP synthetase I family AMD09_RS05100 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD09_RS05110 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD09_RS05110 PF08335 GlnD PII-uridylyltransferase AMD09_RS05115 PF02592 AMD09_RS05115 AMD09_RS05125 PF00082 Subtilase family AMD09_RS05125 PF09286 Pro-kumamolisin, activation domain AMD09_RS05130 PF06258 AMD09_RS05130 AMD09_RS05135 PF00881 Nitroreductase family AMD09_RS05140 PF04264 YceI-like domain AMD09_RS05150 PF00328 Histidine phosphatase superfamily (branch 2) AMD09_RS05155 PF04954 Siderophore-interacting protein AMD09_RS05155 PF08021 Siderophore-interacting FAD-binding domain AMD09_RS05160 PF03551 Transcriptional regulator PadR-like family AMD09_RS05165 PF16957 AMD09_RS05165 AMD09_RS05170 PF06857 AMD09_RS05170 AMD09_RS05175 PF01039 Carboxyl transferase domain AMD09_RS05180 PF06833 Malonate decarboxylase gamma subunit (MdcE) AMD09_RS05185 PF10620 AMD09_RS05185 AMD09_RS05190 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD09_RS05195 PF00698 Acyl transferase domain AMD09_RS05200 PF03600 Citrate transporter AMD09_RS05200 PF07158 AMD09_RS05200 AMD09_RS05205 PF00392 Bacterial regulatory proteins, gntR family AMD09_RS05205 PF07729 FCD domain AMD09_RS05210 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS05215 PF01740 STAS domain AMD09_RS05220 PF13581 Histidine kinase-like ATPase domain AMD09_RS05225 PF00672 HAMP domain AMD09_RS05225 PF02743 Cache domain AMD09_RS05225 PF07228 Stage II sporulation protein E (SpoIIE) AMD09_RS05235 PF01764 Lipase (class 3) AMD09_RS05240 PF07745 Glycosyl hydrolase family 53 AMD09_RS05245 PF00456 Transketolase, thiamine diphosphate binding domain AMD09_RS05250 PF13333 AMD09_RS05250 AMD09_RS05260 PF01527 Transposase AMD09_RS05265 PF00106 short chain dehydrogenase AMD09_RS05270 PF12833 Helix-turn-helix domain AMD09_RS05270 PF12852 Cupin AMD09_RS05280 PF00106 short chain dehydrogenase AMD09_RS05280 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS05285 PF01145 SPFH domain / Band 7 family AMD09_RS05290 PF13409 Glutathione S-transferase, N-terminal domain AMD09_RS05290 PF13410 Glutathione S-transferase, C-terminal domain AMD09_RS05295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS05300 PF13548 AMD09_RS05300 AMD09_RS05310 PF07791 AMD09_RS05310 AMD09_RS05315 PF01527 Transposase AMD09_RS05325 PF13333 AMD09_RS05325 AMD09_RS05330 PF07791 AMD09_RS05330 AMD09_RS05335 PF01433 Peptidase family M1 AMD09_RS05335 PF11838 ERAP1-like C-terminal domain AMD09_RS05340 PF13302 Acetyltransferase (GNAT) domain AMD09_RS05345 PF00588 SpoU rRNA Methylase family AMD09_RS05345 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD09_RS05350 PF00135 Carboxylesterase family AMD09_RS05355 PF03080 AMD09_RS05355 AMD09_RS05360 PF10566 Glycoside hydrolase 97 AMD09_RS05360 PF14508 Glycosyl-hydrolase 97 N-terminal AMD09_RS05360 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD09_RS05365 PF00703 Glycosyl hydrolases family 2 AMD09_RS05365 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD09_RS05365 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD09_RS05365 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD09_RS05370 PF00593 TonB dependent receptor AMD09_RS05370 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS05375 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS05375 PF13377 Periplasmic binding protein-like domain AMD09_RS05385 PF04389 Peptidase family M28 AMD09_RS05390 PF01741 Large-conductance mechanosensitive channel, MscL AMD09_RS05395 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD09_RS05405 PF00355 Rieske [2Fe-2S] domain AMD09_RS05410 PF02080 TrkA-C domain AMD09_RS05410 PF03600 Citrate transporter AMD09_RS05415 PF02390 Putative methyltransferase AMD09_RS05420 PF05690 Thiazole biosynthesis protein ThiG AMD09_RS05425 PF02597 ThiS family AMD09_RS05430 PF00657 GDSL-like Lipase/Acylhydrolase AMD09_RS05430 PF03797 Autotransporter beta-domain AMD09_RS05440 PF00589 Phage integrase family AMD09_RS05445 PF05593 AMD09_RS05445 AMD09_RS05450 PF05593 AMD09_RS05450 AMD09_RS05475 PF01381 Helix-turn-helix AMD09_RS05480 PF13280 AMD09_RS05480 AMD09_RS05490 PF14464 Prokaryotic homologs of the JAB domain AMD09_RS05500 PF00589 Phage integrase family AMD09_RS05515 PF04002 RadC-like JAB domain AMD09_RS05530 PF07791 AMD09_RS05530 AMD09_RS05535 PF14412 AMD09_RS05535 AMD09_RS05550 PF01555 DNA methylase AMD09_RS05555 PF04851 Type III restriction enzyme, res subunit AMD09_RS05560 PF14082 AMD09_RS05560 AMD09_RS05575 PF00665 Integrase core domain AMD09_RS05575 PF13936 Helix-turn-helix domain AMD09_RS05580 PF01695 IstB-like ATP binding protein AMD09_RS05595 PF13391 AMD09_RS05595 AMD09_RS05605 PF03389 MobA/MobL family AMD09_RS05615 PF00565 Staphylococcal nuclease homologue AMD09_RS05625 PF00816 H-NS histone family AMD09_RS05630 PF00128 Alpha amylase, catalytic domain AMD09_RS05630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD09_RS05645 PF00072 Response regulator receiver domain AMD09_RS05645 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS05650 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS05650 PF00672 HAMP domain AMD09_RS05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS05655 PF00665 Integrase core domain AMD09_RS05655 PF13276 AMD09_RS05655 AMD09_RS05660 PF01527 Transposase AMD09_RS05665 PF08845 AMD09_RS05665 AMD09_RS05670 PF05593 AMD09_RS05670 AMD09_RS05675 PF01121 Dephospho-CoA kinase AMD09_RS05680 PF01478 Type IV leader peptidase family AMD09_RS05680 PF06750 AMD09_RS05680 AMD09_RS05685 PF00482 Type II secretion system (T2SS), protein F AMD09_RS05690 PF00114 Pilin (bacterial filament) AMD09_RS05690 PF13633 Prokaryotic N-terminal methylation site AMD09_RS05695 PF00114 Pilin (bacterial filament) AMD09_RS05695 PF13633 Prokaryotic N-terminal methylation site AMD09_RS05700 PF00437 Type II/IV secretion system protein AMD09_RS05700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD09_RS05710 PF00072 Response regulator receiver domain AMD09_RS05710 PF00158 Sigma-54 interaction domain AMD09_RS05710 PF02954 Bacterial regulatory protein, Fis family AMD09_RS05715 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS05720 PF00549 CoA-ligase AMD09_RS05720 PF08442 ATP-grasp domain AMD09_RS05725 PF00549 CoA-ligase AMD09_RS05725 PF02629 CoA binding domain AMD09_RS05735 PF12760 Transposase zinc-ribbon domain AMD09_RS05735 PF12762 AMD09_RS05735 AMD09_RS05750 PF01129 NAD:arginine ADP-ribosyltransferase AMD09_RS05760 PF00665 Integrase core domain AMD09_RS05760 PF13936 Helix-turn-helix domain AMD09_RS05770 PF00959 Phage lysozyme AMD09_RS05785 PF04550 AMD09_RS05785 AMD09_RS05800 PF01527 Transposase AMD09_RS05805 PF00665 Integrase core domain AMD09_RS05805 PF13276 AMD09_RS05805 AMD09_RS05810 PF14700 DNA-directed RNA polymerase N-terminal AMD09_RS05870 PF13155 Toprim-like AMD09_RS05885 PF04606 AMD09_RS05885 AMD09_RS05900 PF05954 Phage late control gene D protein (GPD) AMD09_RS05905 PF06995 AMD09_RS05905 AMD09_RS05910 PF10145 AMD09_RS05910 AMD09_RS05915 PF10109 AMD09_RS05915 AMD09_RS05920 PF04985 AMD09_RS05920 AMD09_RS05925 PF04984 Phage tail sheath protein AMD09_RS05930 PF04965 Gene 25-like lysozyme AMD09_RS05935 PF04717 Phage-related baseplate assembly protein AMD09_RS05955 PF09684 AMD09_RS05955 AMD09_RS05960 PF04865 AMD09_RS05960 AMD09_RS05965 PF00072 Response regulator receiver domain AMD09_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS05970 PF08448 PAS fold AMD09_RS05975 PF05069 AMD09_RS05975 AMD09_RS05980 PF06891 AMD09_RS05980 AMD09_RS05995 PF05449 AMD09_RS05995 AMD09_RS06000 PF16931 AMD09_RS06000 AMD09_RS06005 PF05489 Phage Tail Protein X AMD09_RS06010 PF05926 AMD09_RS06010 AMD09_RS06015 PF05944 AMD09_RS06015 AMD09_RS06020 PF05125 AMD09_RS06020 AMD09_RS06025 PF05929 AMD09_RS06025 AMD09_RS06030 PF03237 Terminase-like family AMD09_RS06030 PF06056 Putative ATPase subunit of terminase (gpP-like) AMD09_RS06035 PF04860 Phage portal protein AMD09_RS06040 PF01555 DNA methylase AMD09_RS06045 PF01695 IstB-like ATP binding protein AMD09_RS06050 PF06114 Domain of unknown function (DUF955) AMD09_RS06055 PF00817 impB/mucB/samB family AMD09_RS06055 PF11799 impB/mucB/samB family C-terminal domain AMD09_RS06055 PF13438 AMD09_RS06055 AMD09_RS06060 PF00717 Peptidase S24-like AMD09_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS06075 PF05697 Bacterial trigger factor protein (TF) AMD09_RS06075 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD09_RS06080 PF00574 Clp protease AMD09_RS06085 PF06689 ClpX C4-type zinc finger AMD09_RS06085 PF07724 AAA domain (Cdc48 subfamily) AMD09_RS06085 PF10431 C-terminal, D2-small domain, of ClpB protein AMD09_RS06090 PF00004 ATPase family associated with various cellular activities (AAA) AMD09_RS06090 PF02190 ATP-dependent protease La (LON) domain AMD09_RS06090 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD09_RS06095 PF00216 Bacterial DNA-binding protein AMD09_RS06115 PF13145 PPIC-type PPIASE domain AMD09_RS06115 PF13616 PPIC-type PPIASE domain AMD09_RS06115 PF13623 AMD09_RS06115 AMD09_RS06120 PF01464 Transglycosylase SLT domain AMD09_RS06120 PF01476 LysM domain AMD09_RS06125 PF00753 Metallo-beta-lactamase superfamily AMD09_RS06125 PF16123 AMD09_RS06125 AMD09_RS06135 PF00075 RNase H AMD09_RS06140 PF00929 Exonuclease AMD09_RS06145 PF13672 Protein phosphatase 2C AMD09_RS06160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD09_RS06165 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family AMD09_RS06170 PF12706 Beta-lactamase superfamily domain AMD09_RS06175 PF04055 Radical SAM superfamily AMD09_RS06175 PF06463 Molybdenum Cofactor Synthesis C AMD09_RS06175 PF13353 4Fe-4S single cluster domain AMD09_RS06185 PF01967 MoaC family AMD09_RS06190 PF02597 ThiS family AMD09_RS06195 PF02391 MoaE protein AMD09_RS06200 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS06205 PF01527 Transposase AMD09_RS06210 PF00665 Integrase core domain AMD09_RS06210 PF13276 AMD09_RS06210 AMD09_RS06215 PF03389 MobA/MobL family AMD09_RS06230 PF00589 Phage integrase family AMD09_RS06240 PF12169 DNA polymerase III subunits gamma and tau domain III AMD09_RS06240 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD09_RS06240 PF13177 DNA polymerase III, delta subunit AMD09_RS06245 PF02575 YbaB/EbfC DNA-binding family AMD09_RS06250 PF02132 RecR protein AMD09_RS06250 PF13662 Toprim domain AMD09_RS06255 PF01230 HIT domain AMD09_RS06260 PF03843 AMD09_RS06260 AMD09_RS06265 PF01841 Transglutaminase-like superfamily AMD09_RS06265 PF11992 AMD09_RS06265 AMD09_RS06270 PF01882 AMD09_RS06270 AMD09_RS06275 PF07726 ATPase family associated with various cellular activities (AAA) AMD09_RS06280 PF13231 AMD09_RS06280 AMD09_RS06300 PF02545 Maf-like protein AMD09_RS06305 PF02620 AMD09_RS06305 AMD09_RS06310 PF01783 Ribosomal L32p protein family AMD09_RS06315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD09_RS06315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD09_RS06320 PF08670 AMD09_RS06320 AMD09_RS06325 PF00698 Acyl transferase domain AMD09_RS06330 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS06335 PF00550 Phosphopantetheine attachment site AMD09_RS06340 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD09_RS06340 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD09_RS06345 PF00425 chorismate binding enzyme AMD09_RS06350 PF02618 YceG-like family AMD09_RS06355 PF13177 DNA polymerase III, delta subunit AMD09_RS06360 PF07238 PilZ domain AMD09_RS06375 PF00158 Sigma-54 interaction domain AMD09_RS06375 PF02954 Bacterial regulatory protein, Fis family AMD09_RS06375 PF06506 Propionate catabolism activator AMD09_RS06380 PF13714 Phosphoenolpyruvate phosphomutase AMD09_RS06385 PF00285 Citrate synthase AMD09_RS06390 PF00330 Aconitase family (aconitate hydratase) AMD09_RS06390 PF00694 Aconitase C-terminal domain AMD09_RS06395 PF03693 Uncharacterised protein family (UPF0156) AMD09_RS06400 PF04303 PrpF protein AMD09_RS06405 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS06410 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD09_RS06415 PF00207 Alpha-2-macroglobulin family AMD09_RS06415 PF01835 MG2 domain AMD09_RS06415 PF07703 Alpha-2-macroglobulin family N-terminal region AMD09_RS06415 PF11974 Alpha-2-macroglobulin MG1 domain AMD09_RS06420 PF00593 TonB dependent receptor AMD09_RS06420 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS06425 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD09_RS06425 PF16387 AMD09_RS06425 AMD09_RS06430 PF00905 Penicillin binding protein transpeptidase domain AMD09_RS06430 PF00912 Transglycosylase AMD09_RS06430 PF06832 AMD09_RS06430 AMD09_RS06435 PF00210 Ferritin-like domain AMD09_RS06440 PF08534 Redoxin AMD09_RS06445 PF00011 Hsp20/alpha crystallin family AMD09_RS06450 PF00226 DnaJ domain AMD09_RS06450 PF01556 DnaJ C terminal domain AMD09_RS06455 PF00072 Response regulator receiver domain AMD09_RS06460 PF01145 SPFH domain / Band 7 family AMD09_RS06465 PF01145 SPFH domain / Band 7 family AMD09_RS06470 PF01797 Transposase IS200 like AMD09_RS06475 PF00709 Adenylosuccinate synthetase AMD09_RS06480 PF01433 Peptidase family M1 AMD09_RS06480 PF11838 ERAP1-like C-terminal domain AMD09_RS06490 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS06495 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS06535 PF05016 Plasmid stabilisation system protein AMD09_RS06545 PF00069 Protein kinase domain AMD09_RS06560 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS06565 PF00300 Histidine phosphatase superfamily (branch 1) AMD09_RS06570 PF01256 Carbohydrate kinase AMD09_RS06575 PF02055 O-Glycosyl hydrolase family 30 AMD09_RS06575 PF17189 AMD09_RS06575 AMD09_RS06580 PF00723 Glycosyl hydrolases family 15 AMD09_RS06585 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS06590 PF07971 Glycosyl hydrolase family 92 AMD09_RS06595 PF00106 short chain dehydrogenase AMD09_RS06605 PF13532 2OG-Fe(II) oxygenase superfamily AMD09_RS06610 PF00027 Cyclic nucleotide-binding domain AMD09_RS06610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS06615 PF02148 Zn-finger in ubiquitin-hydrolases and other protein AMD09_RS06620 PF00563 EAL domain AMD09_RS06625 PF13328 HD domain AMD09_RS06630 PF00005 ABC transporter AMD09_RS06635 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD09_RS06635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD09_RS06640 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD09_RS06640 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD09_RS06645 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD09_RS06645 PF01799 [2Fe-2S] binding domain AMD09_RS06650 PF05559 AMD09_RS06650 AMD09_RS06660 PF07883 Cupin domain AMD09_RS06670 PF02661 Fic/DOC family AMD09_RS06675 PF04014 Antidote-toxin recognition MazE AMD09_RS06680 PF00717 Peptidase S24-like AMD09_RS06680 PF01726 LexA DNA binding domain AMD09_RS06690 PF00817 impB/mucB/samB family AMD09_RS06695 PF02811 PHP domain AMD09_RS06695 PF07733 Bacterial DNA polymerase III alpha subunit AMD09_RS06695 PF14579 Helix-hairpin-helix motif AMD09_RS06700 PF00326 Prolyl oligopeptidase family AMD09_RS06705 PF08668 HDOD domain AMD09_RS06710 PF03169 AMD09_RS06710 AMD09_RS06715 PF13557 AMD09_RS06715 AMD09_RS06725 PF00326 Prolyl oligopeptidase family AMD09_RS06725 PF07676 WD40-like Beta Propeller Repeat AMD09_RS06740 PF08448 PAS fold AMD09_RS06740 PF12833 Helix-turn-helix domain AMD09_RS06765 PF00270 DEAD/DEAH box helicase AMD09_RS06765 PF00271 Helicase conserved C-terminal domain AMD09_RS06765 PF02559 CarD-like/TRCF domain AMD09_RS06765 PF03461 TRCF domain AMD09_RS06770 PF00583 Acetyltransferase (GNAT) family AMD09_RS06775 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AMD09_RS06780 PF00072 Response regulator receiver domain AMD09_RS06780 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS06785 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS06785 PF00672 HAMP domain AMD09_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS06790 PF00112 Papain family cysteine protease AMD09_RS06795 PF06123 AMD09_RS06795 AMD09_RS06810 PF00795 Carbon-nitrogen hydrolase AMD09_RS06815 PF12275 AMD09_RS06815 AMD09_RS06820 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD09_RS06825 PF01475 Ferric uptake regulator family AMD09_RS06830 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS06830 PF14246 AefR-like transcriptional repressor, C-terminal region AMD09_RS06835 PF00529 HlyD family secretion protein AMD09_RS06835 PF16576 AMD09_RS06835 AMD09_RS06840 PF00873 AcrB/AcrD/AcrF family AMD09_RS06845 PF02321 Outer membrane efflux protein AMD09_RS06850 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS06855 PF07883 Cupin domain AMD09_RS06860 PF06719 AMD09_RS06860 AMD09_RS06860 PF12833 Helix-turn-helix domain AMD09_RS06870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS06870 PF03466 LysR substrate binding domain AMD09_RS06875 PF07690 Major Facilitator Superfamily AMD09_RS06880 PF00248 Aldo/keto reductase family AMD09_RS06890 PF00082 Subtilase family AMD09_RS06890 PF01483 Proprotein convertase P-domain AMD09_RS06900 PF00082 Subtilase family AMD09_RS06900 PF01483 Proprotein convertase P-domain AMD09_RS06905 PF00593 TonB dependent receptor AMD09_RS06905 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS06910 PF00593 TonB dependent receptor AMD09_RS06910 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS06915 PF03203 AMD09_RS06915 AMD09_RS06920 PF17067 AMD09_RS06920 AMD09_RS06925 PF00107 Zinc-binding dehydrogenase AMD09_RS06925 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS06930 PF00654 Voltage gated chloride channel AMD09_RS06935 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AMD09_RS06940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD09_RS06940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD09_RS06945 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD09_RS06945 PF02805 Metal binding domain of Ada AMD09_RS06945 PF06029 AlkA N-terminal domain AMD09_RS06945 PF12833 Helix-turn-helix domain AMD09_RS06960 PF13211 AMD09_RS06960 AMD09_RS06965 PF01124 MAPEG family AMD09_RS06975 PF13275 S4 domain AMD09_RS06985 PF04542 Sigma-70 region 2 AMD09_RS06985 PF08281 Sigma-70, region 4 AMD09_RS06990 PF00270 DEAD/DEAH box helicase AMD09_RS06990 PF00271 Helicase conserved C-terminal domain AMD09_RS06990 PF03880 DbpA RNA binding domain AMD09_RS06995 PF00563 EAL domain AMD09_RS06995 PF00990 GGDEF domain AMD09_RS06995 PF08447 PAS fold AMD09_RS07000 PF00849 RNA pseudouridylate synthase AMD09_RS07000 PF01479 S4 domain AMD09_RS07005 PF00990 GGDEF domain AMD09_RS07005 PF01590 GAF domain AMD09_RS07010 PF00892 EamA-like transporter family AMD09_RS07015 PF01904 Protein of unknown function DUF72 AMD09_RS07025 PF03737 Demethylmenaquinone methyltransferase AMD09_RS07030 PF00144 Beta-lactamase AMD09_RS07030 PF11954 AMD09_RS07030 AMD09_RS07035 PF00999 Sodium/hydrogen exchanger family AMD09_RS07040 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS07040 PF00672 HAMP domain AMD09_RS07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS07045 PF00072 Response regulator receiver domain AMD09_RS07045 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS07050 PF02321 Outer membrane efflux protein AMD09_RS07055 PF06629 AMD09_RS07055 AMD09_RS07060 PF16576 AMD09_RS07060 AMD09_RS07065 PF00873 AcrB/AcrD/AcrF family AMD09_RS07070 PF07929 Plasmid pRiA4b ORF-3-like protein AMD09_RS07075 PF00005 ABC transporter AMD09_RS07075 PF00664 ABC transporter transmembrane region AMD09_RS07080 PF05960 Bacterial protein of unknown function (DUF885) AMD09_RS07090 PF14257 AMD09_RS07090 AMD09_RS07105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS07105 PF03466 LysR substrate binding domain AMD09_RS07110 PF00892 EamA-like transporter family AMD09_RS07115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD09_RS07120 PF04070 AMD09_RS07120 AMD09_RS07135 PF14539 Domain of unknown function (DUF4442) AMD09_RS07145 PF00085 Thioredoxin AMD09_RS07145 PF14559 Tetratricopeptide repeat AMD09_RS07145 PF14561 Tetratricopeptide repeat AMD09_RS07150 PF06197 AMD09_RS07150 AMD09_RS07155 PF00133 tRNA synthetases class I (I, L, M and V) AMD09_RS07155 PF08264 Anticodon-binding domain of tRNA AMD09_RS07155 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD09_RS07160 PF04390 Lipopolysaccharide-assembly AMD09_RS07165 PF06144 DNA polymerase III, delta subunit AMD09_RS07170 PF01467 Cytidylyltransferase AMD09_RS07175 PF02410 Oligomerisation domain AMD09_RS07180 PF05787 Bacterial protein of unknown function (DUF839) AMD09_RS07180 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD09_RS07185 PF02590 Predicted SPOUT methyltransferase AMD09_RS07190 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS07195 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS07195 PF13620 Carboxypeptidase regulatory-like domain AMD09_RS07200 PF04402 Protein of unknown function (DUF541) AMD09_RS07205 PF02545 Maf-like protein AMD09_RS07210 PF10150 Ribonuclease E/G family AMD09_RS07215 PF13116 AMD09_RS07215 AMD09_RS07215 PF13502 AMD09_RS07215 AMD09_RS07225 PF01523 Putative modulator of DNA gyrase AMD09_RS07230 PF04751 Protein of unknown function (DUF615) AMD09_RS07235 PF01523 Putative modulator of DNA gyrase AMD09_RS07240 PF09685 AMD09_RS07240 AMD09_RS07245 PF14521 Lysine-specific metallo-endopeptidase AMD09_RS07250 PF00348 Polyprenyl synthetase AMD09_RS07255 PF02609 Exonuclease VII small subunit AMD09_RS07260 PF01171 PP-loop family AMD09_RS07260 PF09179 TilS substrate binding domain AMD09_RS07260 PF11734 TilS substrate C-terminal domain AMD09_RS07265 PF00245 Alkaline phosphatase AMD09_RS07270 PF00375 Sodium:dicarboxylate symporter family AMD09_RS07275 PF13847 Methyltransferase domain AMD09_RS07280 PF03061 Thioesterase superfamily AMD09_RS07285 PF00877 NlpC/P60 family AMD09_RS07290 PF00877 NlpC/P60 family AMD09_RS07295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD09_RS07300 PF04235 AMD09_RS07300 AMD09_RS07305 PF01266 FAD dependent oxidoreductase AMD09_RS07310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD09_RS07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS07315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD09_RS07320 PF01694 Rhomboid family AMD09_RS07325 PF01431 Peptidase family M13 AMD09_RS07325 PF05649 Peptidase family M13 AMD09_RS07330 PF01431 Peptidase family M13 AMD09_RS07330 PF05649 Peptidase family M13 AMD09_RS07335 PF01431 Peptidase family M13 AMD09_RS07335 PF05649 Peptidase family M13 AMD09_RS07340 PF01593 Flavin containing amine oxidoreductase AMD09_RS07345 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS07350 PF00593 TonB dependent receptor AMD09_RS07350 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS07355 PF10609 ParA/MinD ATPase like AMD09_RS07360 PF00692 dUTPase AMD09_RS07375 PF01230 HIT domain AMD09_RS07380 PF01738 Dienelactone hydrolase family AMD09_RS07385 PF00919 Uncharacterized protein family UPF0004 AMD09_RS07385 PF04055 Radical SAM superfamily AMD09_RS07390 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD09_RS07390 PF03449 Transcription elongation factor, N-terminal AMD09_RS07395 PF01694 Rhomboid family AMD09_RS07405 PF00293 NUDIX domain AMD09_RS07410 PF05872 AMD09_RS07410 AMD09_RS07415 PF01464 Transglycosylase SLT domain AMD09_RS07415 PF01476 LysM domain AMD09_RS07420 PF02666 AMD09_RS07420 AMD09_RS07425 PF02630 SCO1/SenC AMD09_RS07430 PF05175 Methyltransferase small domain AMD09_RS07435 PF01264 Chorismate synthase AMD09_RS07440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD09_RS07440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD09_RS07445 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD09_RS07445 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD09_RS07460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS07465 PF01416 tRNA pseudouridine synthase AMD09_RS07470 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD09_RS07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS07475 PF03466 LysR substrate binding domain AMD09_RS07480 PF00291 Pyridoxal-phosphate dependent enzyme AMD09_RS07490 PF00290 Tryptophan synthase alpha chain AMD09_RS07495 PF01039 Carboxyl transferase domain AMD09_RS07500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD09_RS07500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD09_RS07500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD09_RS07500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD09_RS07510 PF03171 2OG-Fe(II) oxygenase superfamily AMD09_RS07510 PF14226 non-haem dioxygenase in morphine synthesis N-terminal AMD09_RS07520 PF00563 EAL domain AMD09_RS07520 PF00672 HAMP domain AMD09_RS07520 PF00990 GGDEF domain AMD09_RS07520 PF14827 Sensory domain of two-component sensor kinase AMD09_RS07525 PF11231 AMD09_RS07525 AMD09_RS07530 PF01152 Bacterial-like globin AMD09_RS07535 PF00106 short chain dehydrogenase AMD09_RS07540 PF00121 Triosephosphate isomerase AMD09_RS07545 PF03840 Preprotein translocase SecG subunit AMD09_RS07555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD09_RS07560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD09_RS07565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD09_RS07570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD09_RS07575 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AMD09_RS07580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD09_RS07580 PF10531 SLBB domain AMD09_RS07580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD09_RS07585 PF00384 Molybdopterin oxidoreductase AMD09_RS07585 PF01568 Molydopterin dinucleotide binding domain AMD09_RS07585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD09_RS07585 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD09_RS07590 PF00146 NADH dehydrogenase AMD09_RS07595 PF12838 4Fe-4S dicluster domain AMD09_RS07600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD09_RS07605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD09_RS07610 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD09_RS07610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD09_RS07615 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD09_RS07620 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD09_RS07630 PF02576 Uncharacterised BCR, YhbC family COG0779 AMD09_RS07635 PF00575 S1 RNA binding domain AMD09_RS07635 PF08529 NusA N-terminal domain AMD09_RS07635 PF13184 NusA-like KH domain AMD09_RS07635 PF14520 Helix-hairpin-helix domain AMD09_RS07640 PF00009 Elongation factor Tu GTP binding domain AMD09_RS07640 PF04760 Translation initiation factor IF-2, N-terminal region AMD09_RS07640 PF08364 AMD09_RS07640 AMD09_RS07640 PF11987 Translation-initiation factor 2 AMD09_RS07645 PF02033 Ribosome-binding factor A AMD09_RS07650 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD09_RS07650 PF09157 Pseudouridine synthase II TruB, C-terminal AMD09_RS07650 PF16198 AMD09_RS07650 AMD09_RS07655 PF00312 Ribosomal protein S15 AMD09_RS07660 PF00013 KH domain AMD09_RS07660 PF00575 S1 RNA binding domain AMD09_RS07660 PF01138 3' exoribonuclease family, domain 1 AMD09_RS07660 PF03725 3' exoribonuclease family, domain 2 AMD09_RS07660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD09_RS07665 PF10030 AMD09_RS07665 AMD09_RS07670 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD09_RS07670 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD09_RS07675 PF03966 Trm112p-like protein AMD09_RS07680 PF00731 AIR carboxylase AMD09_RS07685 PF02222 ATP-grasp domain AMD09_RS07690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD09_RS07690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD09_RS07695 PF00462 Glutaredoxin AMD09_RS07700 PF00106 short chain dehydrogenase AMD09_RS07705 PF01914 AMD09_RS07705 AMD09_RS07710 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS07710 PF13620 Carboxypeptidase regulatory-like domain AMD09_RS07715 PF03641 Possible lysine decarboxylase AMD09_RS07715 PF11892 Domain of unknown function (DUF3412) AMD09_RS07715 PF14793 Domain of unknown function (DUF4478) AMD09_RS07720 PF06580 AMD09_RS07720 AMD09_RS07725 PF12019 Type II transport protein GspH AMD09_RS07725 PF13633 Prokaryotic N-terminal methylation site AMD09_RS07730 PF13544 AMD09_RS07730 AMD09_RS07735 PF13544 AMD09_RS07735 AMD09_RS07735 PF16074 AMD09_RS07735 AMD09_RS07740 PF13681 AMD09_RS07740 AMD09_RS07740 PF14341 AMD09_RS07740 AMD09_RS07745 PF05567 Neisseria PilC beta-propeller domain AMD09_RS07750 PF13633 Prokaryotic N-terminal methylation site AMD09_RS07750 PF16732 AMD09_RS07750 AMD09_RS07760 PF01527 Transposase AMD09_RS07770 PF04717 Phage-related baseplate assembly protein AMD09_RS07775 PF11459 AMD09_RS07775 AMD09_RS07775 PF17194 AMD09_RS07775 AMD09_RS07780 PF08843 Nucleotidyl transferase of unknown function (DUF1814) AMD09_RS07790 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD09_RS07795 PF04002 RadC-like JAB domain AMD09_RS07800 PF05284 AMD09_RS07800 AMD09_RS07805 PF13560 Helix-turn-helix domain AMD09_RS07810 PF01527 Transposase AMD09_RS07820 PF10070 AMD09_RS07820 AMD09_RS07825 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD09_RS07825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD09_RS07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS07830 PF03466 LysR substrate binding domain AMD09_RS07845 PF00672 HAMP domain AMD09_RS07845 PF17201 AMD09_RS07845 AMD09_RS07850 PF00072 Response regulator receiver domain AMD09_RS07850 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS07855 PF07495 Y_Y_Y domain AMD09_RS07855 PF07730 Histidine kinase AMD09_RS07860 PF12833 Helix-turn-helix domain AMD09_RS07865 PF00857 Isochorismatase family AMD09_RS07870 PF07681 AMD09_RS07870 AMD09_RS07875 PF07969 Amidohydrolase family AMD09_RS07885 PF05977 Transmembrane secretion effector AMD09_RS07900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD09_RS07900 PF10414 Sirohaem synthase dimerisation region AMD09_RS07900 PF13241 Putative NAD(P)-binding AMD09_RS07900 PF14824 Sirohaem biosynthesis protein central AMD09_RS07905 PF00072 Response regulator receiver domain AMD09_RS07910 PF10685 AMD09_RS07910 AMD09_RS07915 PF05974 Domain of unknown function (DUF892) AMD09_RS07920 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMD09_RS07925 PF07081 Protein of unknown function (DUF1349) AMD09_RS07930 PF00563 EAL domain AMD09_RS07935 PF12951 AMD09_RS07935 AMD09_RS07935 PF13018 AMD09_RS07935 AMD09_RS07940 PF00072 Response regulator receiver domain AMD09_RS07940 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS07945 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS07950 PF02321 Outer membrane efflux protein AMD09_RS07955 PF00873 AcrB/AcrD/AcrF family AMD09_RS07960 PF16576 AMD09_RS07960 AMD09_RS07970 PF00082 Subtilase family AMD09_RS07970 PF03797 Autotransporter beta-domain AMD09_RS07970 PF12951 AMD09_RS07970 AMD09_RS07985 PF06580 AMD09_RS07985 AMD09_RS07990 PF00072 Response regulator receiver domain AMD09_RS07990 PF04397 LytTr DNA-binding domain AMD09_RS07995 PF00144 Beta-lactamase AMD09_RS08005 PF07995 Glucose / Sorbosone dehydrogenase AMD09_RS08025 PF09335 AMD09_RS08025 AMD09_RS08035 PF01527 Transposase AMD09_RS08040 PF00665 Integrase core domain AMD09_RS08040 PF13276 AMD09_RS08040 AMD09_RS08050 PF12375 AMD09_RS08050 AMD09_RS08060 PF05707 Zonular occludens toxin (Zot) AMD09_RS08080 PF17091 AMD09_RS08080 AMD09_RS08085 PF02303 Helix-destabilising protein AMD09_RS08090 PF02486 AMD09_RS08090 AMD09_RS08100 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS08105 PF00732 GMC oxidoreductase AMD09_RS08105 PF05199 GMC oxidoreductase AMD09_RS08110 PF12697 Alpha/beta hydrolase family AMD09_RS08110 PF13618 AMD09_RS08110 AMD09_RS08115 PF00535 Glycosyl transferase family 2 AMD09_RS08120 PF05401 Nodulation protein S (NodS) AMD09_RS08125 PF02585 GlcNAc-PI de-N-acetylase AMD09_RS08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS08135 PF01596 O-methyltransferase AMD09_RS08140 PF04940 Sensors of blue-light using FAD AMD09_RS08155 PF01106 NifU-like domain AMD09_RS08155 PF01521 Iron-sulphur cluster biosynthesis AMD09_RS08160 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD09_RS08165 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS08170 PF02535 AMD09_RS08170 AMD09_RS08175 PF11737 AMD09_RS08175 AMD09_RS08180 PF00849 RNA pseudouridylate synthase AMD09_RS08180 PF01479 S4 domain AMD09_RS08185 PF00575 S1 RNA binding domain AMD09_RS08185 PF10150 Ribonuclease E/G family AMD09_RS08190 PF00072 Response regulator receiver domain AMD09_RS08190 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS08195 PF00581 Rhodanese-like domain AMD09_RS08205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD09_RS08210 PF03486 HI0933-like protein AMD09_RS08215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD09_RS08215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD09_RS08215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD09_RS08225 PF00589 Phage integrase family AMD09_RS08230 PF01527 Transposase AMD09_RS08235 PF00665 Integrase core domain AMD09_RS08235 PF13276 AMD09_RS08235 AMD09_RS08240 PF01527 Transposase AMD09_RS08245 PF00665 Integrase core domain AMD09_RS08250 PF00501 AMP-binding enzyme AMD09_RS08250 PF00550 Phosphopantetheine attachment site AMD09_RS08250 PF00668 Condensation domain AMD09_RS08250 PF00975 Thioesterase domain AMD09_RS08250 PF13193 AMP-binding enzyme C-terminal domain AMD09_RS08255 PF00501 AMP-binding enzyme AMD09_RS08255 PF00550 Phosphopantetheine attachment site AMD09_RS08255 PF00668 Condensation domain AMD09_RS08255 PF13193 AMP-binding enzyme C-terminal domain AMD09_RS08270 PF05598 AMD09_RS08270 AMD09_RS08285 PF01609 Transposase DDE domain AMD09_RS08290 PF00665 Integrase core domain AMD09_RS08290 PF13936 Helix-turn-helix domain AMD09_RS08295 PF01695 IstB-like ATP binding protein AMD09_RS08300 PF12101 AMD09_RS08300 AMD09_RS08305 PF13091 PLD-like domain AMD09_RS08310 PF09369 AMD09_RS08310 AMD09_RS08315 PF00271 Helicase conserved C-terminal domain AMD09_RS08325 PF00271 Helicase conserved C-terminal domain AMD09_RS08330 PF01695 IstB-like ATP binding protein AMD09_RS08335 PF00665 Integrase core domain AMD09_RS08335 PF13936 Helix-turn-helix domain AMD09_RS08340 PF00176 SNF2 family N-terminal domain AMD09_RS08345 PF00145 C-5 cytosine-specific DNA methylase AMD09_RS08355 PF01695 IstB-like ATP binding protein AMD09_RS08360 PF00665 Integrase core domain AMD09_RS08360 PF13936 Helix-turn-helix domain AMD09_RS08365 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD09_RS08370 PF13614 AAA domain AMD09_RS08380 PF02195 ParB-like nuclease domain AMD09_RS08385 PF11198 AMD09_RS08385 AMD09_RS08395 PF08900 AMD09_RS08395 AMD09_RS08400 PF11358 AMD09_RS08400 AMD09_RS08405 PF00436 Single-strand binding protein family AMD09_RS08410 PF01131 DNA topoisomerase AMD09_RS08410 PF01396 AMD09_RS08410 AMD09_RS08410 PF01751 Toprim domain AMD09_RS08415 PF00145 C-5 cytosine-specific DNA methylase AMD09_RS08450 PF11284 AMD09_RS08450 AMD09_RS08460 PF13936 Helix-turn-helix domain AMD09_RS08465 PF12101 AMD09_RS08465 AMD09_RS08470 PF11679 AMD09_RS08470 AMD09_RS08495 PF00271 Helicase conserved C-terminal domain AMD09_RS08515 PF01464 Transglycosylase SLT domain AMD09_RS08520 PF11072 AMD09_RS08520 AMD09_RS08525 PF12696 TraM recognition site of TraD and TraG AMD09_RS08530 PF14348 AMD09_RS08530 AMD09_RS08535 PF09686 AMD09_RS08535 AMD09_RS08540 PF11660 AMD09_RS08540 AMD09_RS08545 PF11190 AMD09_RS08545 AMD09_RS08550 PF11990 AMD09_RS08550 AMD09_RS08555 PF11444 AMD09_RS08555 AMD09_RS08560 PF11920 AMD09_RS08560 AMD09_RS08575 PF11130 AMD09_RS08575 AMD09_RS08580 PF13462 Thioredoxin AMD09_RS08585 PF04002 RadC-like JAB domain AMD09_RS08590 PF07511 AMD09_RS08590 AMD09_RS08595 PF06834 AMD09_RS08595 AMD09_RS08610 PF07916 AMD09_RS08610 AMD09_RS08615 PF12553 AMD09_RS08615 AMD09_RS08620 PF08808 AMD09_RS08620 AMD09_RS08630 PF07514 Putative helicase AMD09_RS08645 PF04610 AMD09_RS08645 AMD09_RS08655 PF05231 AMD09_RS08655 AMD09_RS08670 PF01609 Transposase DDE domain AMD09_RS08670 PF05598 AMD09_RS08670 AMD09_RS08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS08675 PF03466 LysR substrate binding domain AMD09_RS08680 PF13560 Helix-turn-helix domain AMD09_RS08690 PF01695 IstB-like ATP binding protein AMD09_RS08695 PF00665 Integrase core domain AMD09_RS08695 PF13936 Helix-turn-helix domain AMD09_RS08700 PF13356 Domain of unknown function (DUF4102) AMD09_RS08710 PF01066 CDP-alcohol phosphatidyltransferase AMD09_RS08715 PF01541 GIY-YIG catalytic domain AMD09_RS08715 PF02151 UvrB/uvrC motif AMD09_RS08715 PF08459 UvrC Helix-hairpin-helix N-terminal AMD09_RS08720 PF01436 NHL repeat AMD09_RS08725 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD09_RS08730 PF02348 Cytidylyltransferase AMD09_RS08735 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD09_RS08740 PF00005 ABC transporter AMD09_RS08740 PF00664 ABC transporter transmembrane region AMD09_RS08745 PF02472 Biopolymer transport protein ExbD/TolR AMD09_RS08750 PF01618 AMD09_RS08750 AMD09_RS08755 PF00753 Metallo-beta-lactamase superfamily AMD09_RS08755 PF03772 AMD09_RS08755 AMD09_RS08755 PF13567 AMD09_RS08755 AMD09_RS08760 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS08765 PF00005 ABC transporter AMD09_RS08770 PF02687 AMD09_RS08770 AMD09_RS08770 PF12704 MacB-like periplasmic core domain AMD09_RS08780 PF03937 Flavinator of succinate dehydrogenase AMD09_RS08785 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD09_RS08785 PF13534 4Fe-4S dicluster domain AMD09_RS08795 PF00890 FAD binding domain AMD09_RS08795 PF02910 Fumarate reductase flavoprotein C-term AMD09_RS08800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD09_RS08805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD09_RS08810 PF01571 Aminomethyltransferase folate-binding domain AMD09_RS08810 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD09_RS08815 PF00005 ABC transporter AMD09_RS08815 PF08402 TOBE domain AMD09_RS08820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD09_RS08820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD09_RS08825 PF02685 Glucokinase AMD09_RS08830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD09_RS08835 PF00920 Dehydratase family AMD09_RS08840 PF01081 KDPG and KHG aldolase AMD09_RS08845 PF00873 AcrB/AcrD/AcrF family AMD09_RS08850 PF00873 AcrB/AcrD/AcrF family AMD09_RS08855 PF00529 HlyD family secretion protein AMD09_RS08855 PF16576 AMD09_RS08855 AMD09_RS08860 PF00034 Cytochrome c AMD09_RS08865 PF00034 Cytochrome c AMD09_RS08905 PF00072 Response regulator receiver domain AMD09_RS08905 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS08905 PF01590 GAF domain AMD09_RS08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS08905 PF08447 PAS fold AMD09_RS08905 PF08448 PAS fold AMD09_RS08905 PF13185 GAF domain AMD09_RS08910 PF00575 S1 RNA binding domain AMD09_RS08910 PF09371 Tex-like protein N-terminal domain AMD09_RS08910 PF12836 Helix-hairpin-helix motif AMD09_RS08910 PF16921 AMD09_RS08910 AMD09_RS08920 PF01266 FAD dependent oxidoreductase AMD09_RS08930 PF04024 AMD09_RS08930 AMD09_RS08935 PF00561 alpha/beta hydrolase fold AMD09_RS08940 PF09712 AMD09_RS08940 AMD09_RS08945 PF01066 CDP-alcohol phosphatidyltransferase AMD09_RS08950 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS08955 PF00293 NUDIX domain AMD09_RS08960 PF06853 AMD09_RS08960 AMD09_RS08965 PF03618 AMD09_RS08965 AMD09_RS08970 PF00391 PEP-utilising enzyme, mobile domain AMD09_RS08970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD09_RS08970 PF02896 PEP-utilising enzyme, TIM barrel domain AMD09_RS08975 PF00924 Mechanosensitive ion channel AMD09_RS08980 PF00929 Exonuclease AMD09_RS08985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD09_RS08990 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD09_RS08990 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD09_RS08995 PF01566 AMD09_RS08995 AMD09_RS09000 PF00561 alpha/beta hydrolase fold AMD09_RS09010 PF12804 MobA-like NTP transferase domain AMD09_RS09015 PF00994 Probable molybdopterin binding domain AMD09_RS09015 PF03453 MoeA N-terminal region (domain I and II) AMD09_RS09015 PF03454 MoeA C-terminal region (domain IV) AMD09_RS09020 PF04193 PQ loop repeat AMD09_RS09025 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS09030 PF06884 AMD09_RS09030 AMD09_RS09035 PF00107 Zinc-binding dehydrogenase AMD09_RS09035 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS09035 PF13823 Alcohol dehydrogenase GroES-associated AMD09_RS09045 PF13628 AMD09_RS09045 AMD09_RS09055 PF00593 TonB dependent receptor AMD09_RS09055 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS09060 PF00581 Rhodanese-like domain AMD09_RS09060 PF00899 ThiF family AMD09_RS09065 PF00994 Probable molybdopterin binding domain AMD09_RS09065 PF03453 MoeA N-terminal region (domain I and II) AMD09_RS09065 PF03454 MoeA C-terminal region (domain IV) AMD09_RS09070 PF01926 50S ribosome-binding GTPase AMD09_RS09070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD09_RS09075 PF13360 PQQ-like domain AMD09_RS09080 PF09976 Tetratricopeptide repeat AMD09_RS09085 PF13413 Helix-turn-helix domain AMD09_RS09085 PF13464 AMD09_RS09085 AMD09_RS09090 PF13432 Tetratricopeptide repeat AMD09_RS09095 PF04055 Radical SAM superfamily AMD09_RS09100 PF00334 Nucleoside diphosphate kinase AMD09_RS09105 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS09110 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS09110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD09_RS09110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD09_RS09115 PF00108 Thiolase, N-terminal domain AMD09_RS09115 PF02803 Thiolase, C-terminal domain AMD09_RS09125 PF02537 AMD09_RS09125 AMD09_RS09130 PF00004 ATPase family associated with various cellular activities (AAA) AMD09_RS09130 PF12002 MgsA AAA+ ATPase C terminal AMD09_RS09130 PF16193 AMD09_RS09130 AMD09_RS09140 PF03548 Outer membrane lipoprotein carrier protein LolA AMD09_RS09150 PF01580 FtsK/SpoIIIE family AMD09_RS09150 PF09397 Ftsk gamma domain AMD09_RS09150 PF13491 AMD09_RS09150 AMD09_RS09155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS09160 PF04339 AMD09_RS09160 AMD09_RS09165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD09_RS09170 PF01176 Translation initiation factor 1A / IF-1 AMD09_RS09175 PF00004 ATPase family associated with various cellular activities (AAA) AMD09_RS09175 PF02861 Clp amino terminal domain AMD09_RS09175 PF07724 AAA domain (Cdc48 subfamily) AMD09_RS09175 PF10431 C-terminal, D2-small domain, of ClpB protein AMD09_RS09180 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD09_RS09185 PF00293 NUDIX domain AMD09_RS09190 PF03054 tRNA methyl transferase AMD09_RS09195 PF04356 Protein of unknown function (DUF489) AMD09_RS09200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS09210 PF00563 EAL domain AMD09_RS09210 PF00990 GGDEF domain AMD09_RS09210 PF08447 PAS fold AMD09_RS09210 PF13426 PAS domain AMD09_RS09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS09215 PF07730 Histidine kinase AMD09_RS09215 PF08448 PAS fold AMD09_RS09215 PF13426 PAS domain AMD09_RS09220 PF00072 Response regulator receiver domain AMD09_RS09220 PF00563 EAL domain AMD09_RS09220 PF00990 GGDEF domain AMD09_RS09225 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS09225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS09235 PF04316 Anti-sigma-28 factor, FlgM AMD09_RS09240 PF13144 SAF-like AMD09_RS09245 PF00072 Response regulator receiver domain AMD09_RS09245 PF01584 CheW-like domain AMD09_RS09250 PF00460 Flagella basal body rod protein AMD09_RS09255 PF00460 Flagella basal body rod protein AMD09_RS09255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD09_RS09260 PF03963 AMD09_RS09260 AMD09_RS09260 PF13860 FlgD Ig-like domain AMD09_RS09260 PF13861 FlgD Tudor-like domain AMD09_RS09265 PF00460 Flagella basal body rod protein AMD09_RS09265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD09_RS09265 PF07559 Flagellar basal body protein FlaE AMD09_RS09270 PF00460 Flagella basal body rod protein AMD09_RS09270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD09_RS09275 PF00460 Flagella basal body rod protein AMD09_RS09275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD09_RS09280 PF02107 AMD09_RS09280 AMD09_RS09285 PF02119 AMD09_RS09285 AMD09_RS09290 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD09_RS09290 PF10135 AMD09_RS09290 AMD09_RS09295 PF00460 Flagella basal body rod protein AMD09_RS09295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD09_RS09300 PF00669 Bacterial flagellin N-terminal helical region AMD09_RS09300 PF00700 Bacterial flagellin C-terminal helical region AMD09_RS09305 PF00669 Bacterial flagellin N-terminal helical region AMD09_RS09305 PF00700 Bacterial flagellin C-terminal helical region AMD09_RS09305 PF07196 Flagellin hook IN motif AMD09_RS09310 PF02465 AMD09_RS09310 AMD09_RS09310 PF07195 AMD09_RS09310 AMD09_RS09310 PF07196 Flagellin hook IN motif AMD09_RS09315 PF02561 Flagellar protein FliS AMD09_RS09325 PF16823 AMD09_RS09325 AMD09_RS09330 PF00072 Response regulator receiver domain AMD09_RS09330 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS09335 PF00309 AMD09_RS09335 AMD09_RS09335 PF04552 Sigma-54, DNA binding domain AMD09_RS09335 PF04963 Sigma-54 factor, core binding domain AMD09_RS09340 PF00072 Response regulator receiver domain AMD09_RS09345 PF00158 Sigma-54 interaction domain AMD09_RS09345 PF02954 Bacterial regulatory protein, Fis family AMD09_RS09345 PF06490 AMD09_RS09345 AMD09_RS09350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD09_RS09360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD09_RS09360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD09_RS09365 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS09370 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS09375 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS09375 PF14602 Hexapeptide repeat of succinyl-transferase AMD09_RS09380 PF00355 Rieske [2Fe-2S] domain AMD09_RS09380 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMD09_RS09385 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS09390 PF05050 Methyltransferase FkbM domain AMD09_RS09395 PF00535 Glycosyl transferase family 2 AMD09_RS09400 PF02049 AMD09_RS09400 AMD09_RS09405 PF01514 Secretory protein of YscJ/FliF family AMD09_RS09405 PF08345 AMD09_RS09405 AMD09_RS09410 PF01706 FliG C-terminal domain AMD09_RS09410 PF14841 FliG middle domain AMD09_RS09410 PF14842 FliG N-terminal domain AMD09_RS09415 PF02108 AMD09_RS09415 AMD09_RS09420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD09_RS09425 PF02050 Flagellar FliJ protein AMD09_RS09430 PF02120 Flagellar hook-length control protein FliK AMD09_RS09435 PF03748 AMD09_RS09435 AMD09_RS09440 PF01052 Surface presentation of antigens (SPOA) AMD09_RS09440 PF02154 Flagellar motor switch protein FliM AMD09_RS09445 PF01052 Surface presentation of antigens (SPOA) AMD09_RS09450 PF04347 AMD09_RS09450 AMD09_RS09455 PF00813 AMD09_RS09455 AMD09_RS09465 PF01313 AMD09_RS09465 AMD09_RS09470 PF01311 AMD09_RS09470 AMD09_RS09475 PF00990 GGDEF domain AMD09_RS09475 PF07494 Two component regulator propeller AMD09_RS09475 PF07495 Y_Y_Y domain AMD09_RS09480 PF07495 Y_Y_Y domain AMD09_RS09485 PF00990 GGDEF domain AMD09_RS09490 PF00563 EAL domain AMD09_RS09490 PF00990 GGDEF domain AMD09_RS09490 PF03707 AMD09_RS09490 AMD09_RS09495 PF01312 FlhB HrpN YscU SpaS Family AMD09_RS09500 PF00771 FHIPEP family AMD09_RS09505 PF00448 SRP54-type protein, GTPase domain AMD09_RS09510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD09_RS09515 PF04539 Sigma-70 region 3 AMD09_RS09515 PF04542 Sigma-70 region 2 AMD09_RS09515 PF04545 Sigma-70, region 4 AMD09_RS09520 PF00072 Response regulator receiver domain AMD09_RS09525 PF04344 Chemotaxis phosphatase, CheZ AMD09_RS09530 PF01584 CheW-like domain AMD09_RS09530 PF01627 Hpt domain AMD09_RS09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS09530 PF02895 Signal transducing histidine kinase, homodimeric domain AMD09_RS09540 PF04055 Radical SAM superfamily AMD09_RS09540 PF13353 4Fe-4S single cluster domain AMD09_RS09550 PF01381 Helix-turn-helix AMD09_RS09555 PF13683 AMD09_RS09555 AMD09_RS09560 PF01527 Transposase AMD09_RS09565 PF00665 Integrase core domain AMD09_RS09565 PF13276 AMD09_RS09565 AMD09_RS09580 PF00665 Integrase core domain AMD09_RS09580 PF13936 Helix-turn-helix domain AMD09_RS09585 PF01695 IstB-like ATP binding protein AMD09_RS09610 PF00580 UvrD/REP helicase N-terminal domain AMD09_RS09610 PF13361 UvrD-like helicase C-terminal domain AMD09_RS09635 PF09686 AMD09_RS09635 AMD09_RS09640 PF11660 AMD09_RS09640 AMD09_RS09645 PF11190 AMD09_RS09645 AMD09_RS09650 PF11990 AMD09_RS09650 AMD09_RS09655 PF11444 AMD09_RS09655 AMD09_RS09660 PF11920 AMD09_RS09660 AMD09_RS09675 PF11130 AMD09_RS09675 AMD09_RS09680 PF13462 Thioredoxin AMD09_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS09685 PF03466 LysR substrate binding domain AMD09_RS09690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD09_RS09690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD09_RS09695 PF03401 Tripartite tricarboxylate transporter family receptor AMD09_RS09700 PF06684 Amino acid synthesis AMD09_RS09710 PF04002 RadC-like JAB domain AMD09_RS09715 PF07511 AMD09_RS09715 AMD09_RS09720 PF06834 AMD09_RS09720 AMD09_RS09730 PF01507 Phosphoadenosine phosphosulfate reductase family AMD09_RS09740 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD09_RS09745 PF00589 Phage integrase family AMD09_RS09745 PF13356 Domain of unknown function (DUF4102) AMD09_RS09745 PF14659 Phage integrase, N-terminal SAM-like domain AMD09_RS09750 PF00117 Glutamine amidotransferase class-I AMD09_RS09750 PF00958 GMP synthase C terminal domain AMD09_RS09750 PF02540 NAD synthase AMD09_RS09755 PF00478 IMP dehydrogenase / GMP reductase domain AMD09_RS09755 PF00571 CBS domain AMD09_RS09760 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD09_RS09760 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD09_RS09765 PF06844 Protein of unknown function (DUF1244) AMD09_RS09770 PF00999 Sodium/hydrogen exchanger family AMD09_RS09770 PF02254 TrkA-N domain AMD09_RS09775 PF00483 Nucleotidyl transferase AMD09_RS09780 PF02719 Polysaccharide biosynthesis protein AMD09_RS09780 PF13727 CoA-binding domain AMD09_RS09785 PF00953 Glycosyl transferase family 4 AMD09_RS09790 PF13432 Tetratricopeptide repeat AMD09_RS09795 PF06305 AMD09_RS09795 AMD09_RS09800 PF00216 Bacterial DNA-binding protein AMD09_RS09805 PF00575 S1 RNA binding domain AMD09_RS09810 PF02224 Cytidylate kinase AMD09_RS09815 PF00444 Ribosomal protein L36 AMD09_RS09825 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD09_RS09830 PF00795 Carbon-nitrogen hydrolase AMD09_RS09835 PF13420 Acetyltransferase (GNAT) domain AMD09_RS09840 PF01963 AMD09_RS09840 AMD09_RS09845 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS09850 PF00754 F5/8 type C domain AMD09_RS09850 PF06202 Amylo-alpha-1,6-glucosidase AMD09_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS09860 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS09865 PF13416 Bacterial extracellular solute-binding protein AMD09_RS09870 PF10091 Putative glucoamylase AMD09_RS09875 PF13620 Carboxypeptidase regulatory-like domain AMD09_RS09880 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS09880 PF13377 Periplasmic binding protein-like domain AMD09_RS09885 PF01722 BolA-like protein AMD09_RS09890 PF03795 YCII-related domain AMD09_RS09895 PF02616 ScpA/B protein AMD09_RS09900 PF04079 Putative transcriptional regulators (Ypuh-like) AMD09_RS09905 PF00849 RNA pseudouridylate synthase AMD09_RS09905 PF01479 S4 domain AMD09_RS09915 PF05096 Glutamine cyclotransferase AMD09_RS09920 PF00795 Carbon-nitrogen hydrolase AMD09_RS09925 PF00155 Aminotransferase class I and II AMD09_RS09930 PF00005 ABC transporter AMD09_RS09935 PF03379 AMD09_RS09935 AMD09_RS09940 PF01578 AMD09_RS09940 AMD09_RS09945 PF04995 AMD09_RS09945 AMD09_RS09950 PF03100 CcmE AMD09_RS09955 PF01578 AMD09_RS09955 AMD09_RS09955 PF16327 AMD09_RS09955 AMD09_RS09960 PF08534 Redoxin AMD09_RS09965 PF03918 Cytochrome C biogenesis protein AMD09_RS09970 PF13432 Tetratricopeptide repeat AMD09_RS09975 PF00561 alpha/beta hydrolase fold AMD09_RS09980 PF00313 'Cold-shock' DNA-binding domain AMD09_RS09980 PF06961 AMD09_RS09980 AMD09_RS09985 PF00005 ABC transporter AMD09_RS09985 PF00664 ABC transporter transmembrane region AMD09_RS09990 PF00005 ABC transporter AMD09_RS09990 PF00664 ABC transporter transmembrane region AMD09_RS09995 PF01654 AMD09_RS09995 AMD09_RS10000 PF02322 AMD09_RS10000 AMD09_RS10005 PF08173 AMD09_RS10005 AMD09_RS10015 PF07690 Major Facilitator Superfamily AMD09_RS10020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD09_RS10020 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD09_RS10025 PF00171 Aldehyde dehydrogenase family AMD09_RS10030 PF00696 Amino acid kinase family AMD09_RS10030 PF01472 PUA domain AMD09_RS10035 PF03795 YCII-related domain AMD09_RS10040 PF00206 Lyase AMD09_RS10045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD09_RS10050 PF13302 Acetyltransferase (GNAT) domain AMD09_RS10055 PF00696 Amino acid kinase family AMD09_RS10055 PF04768 Protein of unknown function (DUF619) AMD09_RS10060 PF01546 Peptidase family M20/M25/M40 AMD09_RS10060 PF07687 Peptidase dimerisation domain AMD09_RS10065 PF00583 Acetyltransferase (GNAT) family AMD09_RS10070 PF00764 Arginosuccinate synthase AMD09_RS10075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD09_RS10075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD09_RS10085 PF01406 tRNA synthetases class I (C) catalytic domain AMD09_RS10085 PF09190 DALR domain AMD09_RS10090 PF02657 Fe-S metabolism associated domain AMD09_RS10095 PF05977 Transmembrane secretion effector AMD09_RS10100 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD09_RS10110 PF01809 AMD09_RS10110 AMD09_RS10115 PF01979 Amidohydrolase family AMD09_RS10120 PF01551 Peptidase family M23 AMD09_RS10125 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS10130 PF13520 Amino acid permease AMD09_RS10135 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD09_RS10140 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD09_RS10150 PF00753 Metallo-beta-lactamase superfamily AMD09_RS10155 PF16242 AMD09_RS10155 AMD09_RS10170 PF01527 Transposase AMD09_RS10175 PF00295 Glycosyl hydrolases family 28 AMD09_RS10185 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS10190 PF13489 Methyltransferase domain AMD09_RS10195 PF01979 Amidohydrolase family AMD09_RS10205 PF01132 Elongation factor P (EF-P) OB domain AMD09_RS10205 PF08207 Elongation factor P (EF-P) KOW-like domain AMD09_RS10205 PF09285 Elongation factor P, C-terminal AMD09_RS10210 PF13353 4Fe-4S single cluster domain AMD09_RS10215 PF00563 EAL domain AMD09_RS10215 PF00672 HAMP domain AMD09_RS10215 PF00990 GGDEF domain AMD09_RS10215 PF17203 AMD09_RS10215 AMD09_RS10220 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein AMD09_RS10225 PF00588 SpoU rRNA Methylase family AMD09_RS10230 PF00459 Inositol monophosphatase family AMD09_RS10235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD09_RS10235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD09_RS10240 PF00545 ribonuclease AMD09_RS10245 PF01337 Barstar (barnase inhibitor) AMD09_RS10250 PF00005 ABC transporter AMD09_RS10250 PF12848 ABC transporter AMD09_RS10250 PF16326 AMD09_RS10250 AMD09_RS10255 PF00270 DEAD/DEAH box helicase AMD09_RS10255 PF00271 Helicase conserved C-terminal domain AMD09_RS10255 PF03880 DbpA RNA binding domain AMD09_RS10260 PF00156 Phosphoribosyl transferase domain AMD09_RS10265 PF02696 AMD09_RS10265 AMD09_RS10270 PF07859 alpha/beta hydrolase fold AMD09_RS10275 PF00043 Glutathione S-transferase, C-terminal domain AMD09_RS10275 PF02798 Glutathione S-transferase, N-terminal domain AMD09_RS10280 PF00313 'Cold-shock' DNA-binding domain AMD09_RS10285 PF07152 YaeQ protein AMD09_RS10290 PF03486 HI0933-like protein AMD09_RS10295 PF00563 EAL domain AMD09_RS10295 PF00990 GGDEF domain AMD09_RS10295 PF13188 PAS domain AMD09_RS10300 PF01435 Peptidase family M48 AMD09_RS10305 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD09_RS10310 PF00106 short chain dehydrogenase AMD09_RS10315 PF05233 AMD09_RS10315 AMD09_RS10315 PF07879 AMD09_RS10315 AMD09_RS10320 PF01963 AMD09_RS10320 AMD09_RS10325 PF07920 Protein of unknown function (DUF1684) AMD09_RS10330 PF01119 DNA mismatch repair protein, C-terminal domain AMD09_RS10330 PF08676 MutL C terminal dimerisation domain AMD09_RS10330 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS10335 PF01520 N-acetylmuramoyl-L-alanine amidase AMD09_RS10335 PF11741 AMIN domain AMD09_RS10340 PF02367 Uncharacterised P-loop hydrolase UPF0079 AMD09_RS10345 PF01256 Carbohydrate kinase AMD09_RS10345 PF03853 YjeF-related protein N-terminus AMD09_RS10350 PF08331 AMD09_RS10350 AMD09_RS10350 PF13484 AMD09_RS10350 AMD09_RS10355 PF02601 AMD09_RS10355 AMD09_RS10355 PF13742 AMD09_RS10355 AMD09_RS10360 PF06057 Bacterial virulence protein (VirJ) AMD09_RS10365 PF03781 Sulfatase-modifying factor enzyme 1 AMD09_RS10370 PF00570 HRDC domain AMD09_RS10370 PF01612 3'-5' exonuclease AMD09_RS10375 PF01068 ATP dependent DNA ligase domain AMD09_RS10375 PF04679 ATP dependent DNA ligase C terminal region AMD09_RS10375 PF13298 DNA polymerase Ligase (LigD) AMD09_RS10380 PF12244 AMD09_RS10380 AMD09_RS10385 PF00816 H-NS histone family AMD09_RS10395 PF00589 Phage integrase family AMD09_RS10420 PF01609 Transposase DDE domain AMD09_RS10420 PF05598 AMD09_RS10420 AMD09_RS10425 PF00665 Integrase core domain AMD09_RS10430 PF01527 Transposase AMD09_RS10445 PF05016 Plasmid stabilisation system protein AMD09_RS10450 PF01402 Ribbon-helix-helix protein, copG family AMD09_RS10455 PF01526 AMD09_RS10455 AMD09_RS10465 PF00665 Integrase core domain AMD09_RS10465 PF13276 AMD09_RS10465 AMD09_RS10470 PF00239 Resolvase, N terminal domain AMD09_RS10475 PF13166 AMD09_RS10475 AMD09_RS10485 PF02384 N-6 DNA Methylase AMD09_RS10490 PF09572 AMD09_RS10490 AMD09_RS10500 PF07929 Plasmid pRiA4b ORF-3-like protein AMD09_RS10515 PF04796 AMD09_RS10515 AMD09_RS10525 PF13289 AMD09_RS10525 AMD09_RS10530 PF01935 Domain of unknown function DUF87 AMD09_RS10540 PF00990 GGDEF domain AMD09_RS10545 PF01584 CheW-like domain AMD09_RS10550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS10550 PF00672 HAMP domain AMD09_RS10550 PF12729 AMD09_RS10550 AMD09_RS10555 PF02245 Methylpurine-DNA glycosylase (MPG) AMD09_RS10560 PF00270 DEAD/DEAH box helicase AMD09_RS10560 PF00271 Helicase conserved C-terminal domain AMD09_RS10560 PF08494 AMD09_RS10560 AMD09_RS10565 PF11743 AMD09_RS10565 AMD09_RS10575 PF04386 Stringent starvation protein B AMD09_RS10580 PF00043 Glutathione S-transferase, C-terminal domain AMD09_RS10580 PF13417 Glutathione S-transferase, N-terminal domain AMD09_RS10585 PF02167 Cytochrome C1 family AMD09_RS10590 PF00032 Cytochrome b(C-terminal)/b6/petD AMD09_RS10590 PF00033 Cytochrome b(N-terminal)/b6/petB AMD09_RS10595 PF00355 Rieske [2Fe-2S] domain AMD09_RS10595 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD09_RS10600 PF01464 Transglycosylase SLT domain AMD09_RS10605 PF08279 HTH domain AMD09_RS10605 PF13280 AMD09_RS10605 AMD09_RS10610 PF02798 Glutathione S-transferase, N-terminal domain AMD09_RS10615 PF00919 Uncharacterized protein family UPF0004 AMD09_RS10615 PF01938 TRAM domain AMD09_RS10615 PF04055 Radical SAM superfamily AMD09_RS10620 PF02562 PhoH-like protein AMD09_RS10630 PF02130 Uncharacterized protein family UPF0054 AMD09_RS10640 PF00571 CBS domain AMD09_RS10640 PF03471 Transporter associated domain AMD09_RS10645 PF13387 AMD09_RS10645 AMD09_RS10650 PF01544 CorA-like Mg2+ transporter protein AMD09_RS10655 PF00171 Aldehyde dehydrogenase family AMD09_RS10665 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS10670 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS10675 PF00005 ABC transporter AMD09_RS10675 PF08402 TOBE domain AMD09_RS10680 PF02321 Outer membrane efflux protein AMD09_RS10685 PF07690 Major Facilitator Superfamily AMD09_RS10690 PF13533 Biotin-lipoyl like AMD09_RS10690 PF16576 AMD09_RS10690 AMD09_RS10695 PF13416 Bacterial extracellular solute-binding protein AMD09_RS10700 PF00202 Aminotransferase class-III AMD09_RS10705 PF00120 Glutamine synthetase, catalytic domain AMD09_RS10710 PF07722 Peptidase C26 AMD09_RS10715 PF00120 Glutamine synthetase, catalytic domain AMD09_RS10720 PF01266 FAD dependent oxidoreductase AMD09_RS10725 PF00072 Response regulator receiver domain AMD09_RS10725 PF00990 GGDEF domain AMD09_RS10730 PF01814 Hemerythrin HHE cation binding domain AMD09_RS10735 PF00083 Sugar (and other) transporter AMD09_RS10735 PF07690 Major Facilitator Superfamily AMD09_RS10745 PF00384 Molybdopterin oxidoreductase AMD09_RS10745 PF01568 Molydopterin dinucleotide binding domain AMD09_RS10750 PF02634 FdhD/NarQ family AMD09_RS10755 PF07690 Major Facilitator Superfamily AMD09_RS10760 PF00202 Aminotransferase class-III AMD09_RS10770 PF04286 AMD09_RS10770 AMD09_RS10775 PF00072 Response regulator receiver domain AMD09_RS10775 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS10775 PF01627 Hpt domain AMD09_RS10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS10775 PF03924 CHASE domain AMD09_RS10775 PF13426 PAS domain AMD09_RS10780 PF00072 Response regulator receiver domain AMD09_RS10780 PF13487 HD domain AMD09_RS10785 PF07690 Major Facilitator Superfamily AMD09_RS10790 PF05088 AMD09_RS10790 AMD09_RS10790 PF12466 AMD09_RS10790 AMD09_RS10795 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS10800 PF16576 AMD09_RS10800 AMD09_RS10805 PF00873 AcrB/AcrD/AcrF family AMD09_RS10810 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS10810 PF13377 Periplasmic binding protein-like domain AMD09_RS10815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD09_RS10815 PF00381 PTS HPr component phosphorylation site AMD09_RS10815 PF00391 PEP-utilising enzyme, mobile domain AMD09_RS10815 PF02896 PEP-utilising enzyme, TIM barrel domain AMD09_RS10815 PF05524 PEP-utilising enzyme, N-terminal AMD09_RS10820 PF00294 pfkB family carbohydrate kinase AMD09_RS10825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD09_RS10830 PF04966 Carbohydrate-selective porin, OprB family AMD09_RS10845 PF07791 AMD09_RS10845 AMD09_RS10860 PF02355 Protein export membrane protein AMD09_RS10860 PF07549 SecD/SecF GG Motif AMD09_RS10865 PF02355 Protein export membrane protein AMD09_RS10865 PF07549 SecD/SecF GG Motif AMD09_RS10865 PF13721 SecD export protein N-terminal TM region AMD09_RS10870 PF02699 Preprotein translocase subunit AMD09_RS10875 PF01702 Queuine tRNA-ribosyltransferase AMD09_RS10880 PF02547 Queuosine biosynthesis protein AMD09_RS10885 PF01037 AsnC family AMD09_RS10885 PF13412 Winged helix-turn-helix DNA-binding AMD09_RS10895 PF00202 Aminotransferase class-III AMD09_RS10900 PF04488 Glycosyltransferase sugar-binding region containing DXD motif AMD09_RS10905 PF00149 Calcineurin-like phosphoesterase AMD09_RS10905 PF16656 AMD09_RS10905 AMD09_RS10910 PF02333 Phytase AMD09_RS10915 PF00593 TonB dependent receptor AMD09_RS10915 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS10920 PF14681 Uracil phosphoribosyltransferase AMD09_RS10925 PF00759 Glycosyl hydrolase family 9 AMD09_RS10925 PF02927 N-terminal ig-like domain of cellulase AMD09_RS10935 PF01019 Gamma-glutamyltranspeptidase AMD09_RS10940 PF00037 4Fe-4S binding domain AMD09_RS10955 PF01467 Cytidylyltransferase AMD09_RS10960 PF03602 Conserved hypothetical protein 95 AMD09_RS10965 PF00183 Hsp90 protein AMD09_RS10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS10970 PF05593 AMD09_RS10970 AMD09_RS10970 PF14220 AMD09_RS10970 AMD09_RS10975 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMD09_RS10980 PF00593 TonB dependent receptor AMD09_RS10980 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS10985 PF00326 Prolyl oligopeptidase family AMD09_RS10985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD09_RS10990 PF04616 Glycosyl hydrolases family 43 AMD09_RS10995 PF00754 F5/8 type C domain AMD09_RS10995 PF07532 AMD09_RS10995 AMD09_RS11000 PF00593 TonB dependent receptor AMD09_RS11000 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS11010 PF00082 Subtilase family AMD09_RS11010 PF09286 Pro-kumamolisin, activation domain AMD09_RS11025 PF01301 Glycosyl hydrolases family 35 AMD09_RS11030 PF00326 Prolyl oligopeptidase family AMD09_RS11030 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD09_RS11035 PF13520 Amino acid permease AMD09_RS11040 PF05960 Bacterial protein of unknown function (DUF885) AMD09_RS11045 PF05960 Bacterial protein of unknown function (DUF885) AMD09_RS11050 PF00557 Metallopeptidase family M24 AMD09_RS11050 PF01321 Creatinase/Prolidase N-terminal domain AMD09_RS11055 PF00171 Aldehyde dehydrogenase family AMD09_RS11060 PF00701 Dihydrodipicolinate synthetase family AMD09_RS11065 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS11070 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD09_RS11075 PF01266 FAD dependent oxidoreductase AMD09_RS11080 PF05544 Proline racemase AMD09_RS11085 PF08448 PAS fold AMD09_RS11085 PF12833 Helix-turn-helix domain AMD09_RS11090 PF00448 SRP54-type protein, GTPase domain AMD09_RS11090 PF02881 SRP54-type protein, helical bundle domain AMD09_RS11095 PF00633 Helix-hairpin-helix motif AMD09_RS11095 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD09_RS11095 PF14815 NUDIX domain AMD09_RS11100 PF04362 Bacterial Fe(2+) trafficking AMD09_RS11105 PF00072 Response regulator receiver domain AMD09_RS11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS11105 PF13426 PAS domain AMD09_RS11115 PF10685 AMD09_RS11115 AMD09_RS11135 PF08212 Lipocalin-like domain AMD09_RS11140 PF03168 Late embryogenesis abundant protein AMD09_RS11145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS11145 PF02770 Acyl-CoA dehydrogenase, middle domain AMD09_RS11145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD09_RS11145 PF12418 AMD09_RS11145 AMD09_RS11145 PF12806 AMD09_RS11145 AMD09_RS11150 PF14279 AMD09_RS11150 AMD09_RS11155 PF02779 Transketolase, pyrimidine binding domain AMD09_RS11155 PF02780 Transketolase, C-terminal domain AMD09_RS11155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD09_RS11160 PF04101 Glycosyltransferase family 28 C-terminal domain AMD09_RS11170 PF13506 Glycosyl transferase family 21 AMD09_RS11175 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS11180 PF00753 Metallo-beta-lactamase superfamily AMD09_RS11185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD09_RS11185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD09_RS11190 PF01963 AMD09_RS11190 AMD09_RS11195 PF06172 Cupin superfamily (DUF985) AMD09_RS11200 PF03808 AMD09_RS11200 AMD09_RS11205 PF04230 AMD09_RS11205 AMD09_RS11215 PF13440 AMD09_RS11215 AMD09_RS11220 PF13692 Glycosyl transferases group 1 AMD09_RS11225 PF00534 Glycosyl transferases group 1 AMD09_RS11225 PF13439 Glycosyltransferase Family 4 AMD09_RS11230 PF01757 AMD09_RS11230 AMD09_RS11235 PF01757 AMD09_RS11235 AMD09_RS11245 PF02397 AMD09_RS11245 AMD09_RS11245 PF13727 CoA-binding domain AMD09_RS11250 PF02706 Chain length determinant protein AMD09_RS11250 PF13807 AMD09_RS11250 AMD09_RS11255 PF02563 Polysaccharide biosynthesis/export protein AMD09_RS11255 PF10531 SLBB domain AMD09_RS11265 PF13411 MerR HTH family regulatory protein AMD09_RS11270 PF00216 Bacterial DNA-binding protein AMD09_RS11275 PF01588 Putative tRNA binding domain AMD09_RS11275 PF03147 Ferredoxin-fold anticodon binding domain AMD09_RS11275 PF03483 B3/4 domain AMD09_RS11275 PF03484 tRNA synthetase B5 domain AMD09_RS11280 PF01409 tRNA synthetases class II core domain (F) AMD09_RS11280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD09_RS11285 PF00453 Ribosomal protein L20 AMD09_RS11290 PF01632 Ribosomal protein L35 AMD09_RS11295 PF00707 Translation initiation factor IF-3, C-terminal domain AMD09_RS11295 PF05198 Translation initiation factor IF-3, N-terminal domain AMD09_RS11300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD09_RS11300 PF02824 TGS domain AMD09_RS11300 PF03129 Anticodon binding domain AMD09_RS11300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD09_RS11305 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS11305 PF13377 Periplasmic binding protein-like domain AMD09_RS11310 PF00128 Alpha amylase, catalytic domain AMD09_RS11315 PF07690 Major Facilitator Superfamily AMD09_RS11320 PF06202 Amylo-alpha-1,6-glucosidase AMD09_RS11325 PF10566 Glycoside hydrolase 97 AMD09_RS11325 PF14508 Glycosyl-hydrolase 97 N-terminal AMD09_RS11325 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD09_RS11335 PF00593 TonB dependent receptor AMD09_RS11335 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS11340 PF00128 Alpha amylase, catalytic domain AMD09_RS11345 PF01527 Transposase AMD09_RS11350 PF13683 AMD09_RS11350 AMD09_RS11355 PF05231 AMD09_RS11355 AMD09_RS11360 PF00083 Sugar (and other) transporter AMD09_RS11370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD09_RS11370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD09_RS11375 PF14498 Glycosyl hydrolase family 65, N-terminal domain AMD09_RS11380 PF01055 Glycosyl hydrolases family 31 AMD09_RS11380 PF07691 PA14 domain AMD09_RS11380 PF16338 AMD09_RS11380 AMD09_RS11380 PF17137 AMD09_RS11380 AMD09_RS11385 PF02449 Beta-galactosidase AMD09_RS11390 PF03629 Domain of unknown function (DUF303) AMD09_RS11390 PF13364 Beta-galactosidase jelly roll domain AMD09_RS11400 PF00593 TonB dependent receptor AMD09_RS11400 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS11405 PF00593 TonB dependent receptor AMD09_RS11405 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS11410 PF03466 LysR substrate binding domain AMD09_RS11420 PF01081 KDPG and KHG aldolase AMD09_RS11425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD09_RS11425 PF13378 Enolase C-terminal domain-like AMD09_RS11430 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD09_RS11435 PF05035 2-keto-3-deoxy-galactonokinase AMD09_RS11440 PF00037 4Fe-4S binding domain AMD09_RS11440 PF11953 Domain of unknown function (DUF3470) AMD09_RS11450 PF00701 Dihydrodipicolinate synthetase family AMD09_RS11455 PF13740 ACT domain AMD09_RS11460 PF06877 Regulator of ribonuclease activity B AMD09_RS11465 PF00578 AhpC/TSA family AMD09_RS11470 PF02562 PhoH-like protein AMD09_RS11470 PF13638 PIN domain AMD09_RS11480 PF06912 AMD09_RS11480 AMD09_RS11485 PF08543 Phosphomethylpyrimidine kinase AMD09_RS11490 PF12146 Putative lysophospholipase AMD09_RS11505 PF00581 Rhodanese-like domain AMD09_RS11505 PF09335 AMD09_RS11505 AMD09_RS11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS11510 PF03466 LysR substrate binding domain AMD09_RS11520 PF02678 Pirin AMD09_RS11525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS11525 PF08447 PAS fold AMD09_RS11525 PF08448 PAS fold AMD09_RS11535 PF02599 Global regulator protein family AMD09_RS11540 PF01411 tRNA synthetases class II (A) AMD09_RS11540 PF02272 DHHA1 domain AMD09_RS11540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD09_RS11545 PF02631 RecX family AMD09_RS11550 PF00154 recA bacterial DNA recombination protein AMD09_RS11555 PF00717 Peptidase S24-like AMD09_RS11555 PF01726 LexA DNA binding domain AMD09_RS11560 PF03109 AMD09_RS11560 AMD09_RS11565 PF02464 Competence-damaged protein AMD09_RS11570 PF01926 50S ribosome-binding GTPase AMD09_RS11570 PF13167 AMD09_RS11570 AMD09_RS11570 PF16360 AMD09_RS11570 AMD09_RS11580 PF01715 IPP transferase AMD09_RS11585 PF00809 Pterin binding enzyme AMD09_RS11590 PF00004 ATPase family associated with various cellular activities (AAA) AMD09_RS11590 PF01434 Peptidase family M41 AMD09_RS11590 PF06480 FtsH Extracellular AMD09_RS11595 PF01728 FtsJ-like methyltransferase AMD09_RS11600 PF01985 CRS1 / YhbY (CRM) domain AMD09_RS11605 PF04430 Protein of unknown function (DUF498/DUF598) AMD09_RS11610 PF01476 LysM domain AMD09_RS11610 PF01551 Peptidase family M23 AMD09_RS11620 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD09_RS11625 PF01975 Survival protein SurE AMD09_RS11630 PF01713 Smr domain AMD09_RS11635 PF01142 tRNA pseudouridine synthase D (TruD) AMD09_RS11640 PF02542 YgbB family AMD09_RS11645 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD09_RS11650 PF04977 Septum formation initiator AMD09_RS11655 PF00113 Enolase, C-terminal TIM barrel domain AMD09_RS11655 PF03952 Enolase, N-terminal domain AMD09_RS11665 PF00793 DAHP synthetase I family AMD09_RS11670 PF00117 Glutamine amidotransferase class-I AMD09_RS11670 PF06418 CTP synthase N-terminus AMD09_RS11680 PF00204 DNA gyrase B AMD09_RS11680 PF00986 DNA gyrase B subunit, carboxyl terminus AMD09_RS11680 PF01751 Toprim domain AMD09_RS11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS11685 PF00450 Serine carboxypeptidase AMD09_RS11690 PF02698 DUF218 domain AMD09_RS11695 PF01384 AMD09_RS11695 AMD09_RS11700 PF01865 Protein of unknown function DUF47 AMD09_RS11705 PF00571 CBS domain AMD09_RS11705 PF01595 AMD09_RS11705 AMD09_RS11705 PF03471 Transporter associated domain AMD09_RS11710 PF06055 AMD09_RS11710 AMD09_RS11715 PF16242 AMD09_RS11715 AMD09_RS11720 PF00296 Luciferase-like monooxygenase AMD09_RS11725 PF00083 Sugar (and other) transporter AMD09_RS11730 PF00005 ABC transporter AMD09_RS11730 PF00664 ABC transporter transmembrane region AMD09_RS11740 PF04055 Radical SAM superfamily AMD09_RS11745 PF14907 Uncharacterised nucleotidyltransferase AMD09_RS11750 PF00534 Glycosyl transferases group 1 AMD09_RS11750 PF13579 Glycosyl transferase 4-like domain AMD09_RS11755 PF00534 Glycosyl transferases group 1 AMD09_RS11755 PF13439 Glycosyltransferase Family 4 AMD09_RS11760 PF08241 Methyltransferase domain AMD09_RS11765 PF01979 Amidohydrolase family AMD09_RS11770 PF13649 Methyltransferase domain AMD09_RS11775 PF02706 Chain length determinant protein AMD09_RS11785 PF00535 Glycosyl transferase family 2 AMD09_RS11790 PF13440 AMD09_RS11790 AMD09_RS11795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD09_RS11800 PF13480 Acetyltransferase (GNAT) domain AMD09_RS11810 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS11815 PF05523 WxcM-like, C-terminal AMD09_RS11820 PF01292 Prokaryotic cytochrome b561 AMD09_RS11830 PF00034 Cytochrome c AMD09_RS11845 PF04542 Sigma-70 region 2 AMD09_RS11845 PF08281 Sigma-70, region 4 AMD09_RS11855 PF00082 Subtilase family AMD09_RS11860 PF01578 AMD09_RS11860 AMD09_RS11865 PF04995 AMD09_RS11865 AMD09_RS11870 PF03100 CcmE AMD09_RS11875 PF01578 AMD09_RS11875 AMD09_RS11875 PF16327 AMD09_RS11875 AMD09_RS11880 PF00578 AhpC/TSA family AMD09_RS11885 PF03918 Cytochrome C biogenesis protein AMD09_RS11895 PF00072 Response regulator receiver domain AMD09_RS11895 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS11895 PF08448 PAS fold AMD09_RS11900 PF06745 KaiC AMD09_RS11905 PF00072 Response regulator receiver domain AMD09_RS11910 PF00072 Response regulator receiver domain AMD09_RS11910 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS11910 PF00989 PAS fold AMD09_RS11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS11910 PF08447 PAS fold AMD09_RS11910 PF08448 PAS fold AMD09_RS11925 PF01047 MarR family AMD09_RS11930 PF01494 FAD binding domain AMD09_RS11935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS11935 PF00672 HAMP domain AMD09_RS11935 PF12729 AMD09_RS11935 AMD09_RS11940 PF04343 AMD09_RS11940 AMD09_RS11945 PF00589 Phage integrase family AMD09_RS11945 PF13356 Domain of unknown function (DUF4102) AMD09_RS11950 PF02399 AMD09_RS11950 AMD09_RS11960 PF01527 Transposase AMD09_RS11965 PF13560 Helix-turn-helix domain AMD09_RS11970 PF05284 AMD09_RS11970 AMD09_RS11975 PF04002 RadC-like JAB domain AMD09_RS11980 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD09_RS11995 PF11459 AMD09_RS11995 AMD09_RS11995 PF17194 AMD09_RS11995 AMD09_RS12000 PF00589 Phage integrase family AMD09_RS12000 PF13356 Domain of unknown function (DUF4102) AMD09_RS12000 PF14659 Phage integrase, N-terminal SAM-like domain AMD09_RS12015 PF00593 TonB dependent receptor AMD09_RS12015 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS12020 PF07916 AMD09_RS12020 AMD09_RS12025 PF01850 PIN domain AMD09_RS12030 PF04014 Antidote-toxin recognition MazE AMD09_RS12035 PF16263 AMD09_RS12035 AMD09_RS12045 PF04542 Sigma-70 region 2 AMD09_RS12045 PF08281 Sigma-70, region 4 AMD09_RS12050 PF04773 FecR protein AMD09_RS12050 PF16220 AMD09_RS12050 AMD09_RS12055 PF00593 TonB dependent receptor AMD09_RS12055 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS12065 PF10947 AMD09_RS12065 AMD09_RS12070 PF07514 Putative helicase AMD09_RS12070 PF07515 Protein of unknown function (DUF1528) AMD09_RS12075 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD09_RS12075 PF05345 Putative Ig domain AMD09_RS12075 PF06594 AMD09_RS12075 AMD09_RS12085 PF13437 HlyD family secretion protein AMD09_RS12085 PF13533 Biotin-lipoyl like AMD09_RS12090 PF00005 ABC transporter AMD09_RS12090 PF00664 ABC transporter transmembrane region AMD09_RS12095 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD09_RS12100 PF13614 AAA domain AMD09_RS12115 PF11198 AMD09_RS12115 AMD09_RS12125 PF08900 AMD09_RS12125 AMD09_RS12135 PF00436 Single-strand binding protein family AMD09_RS12145 PF00145 C-5 cytosine-specific DNA methylase AMD09_RS12155 PF13304 AAA domain AMD09_RS12185 PF11284 AMD09_RS12185 AMD09_RS12190 PF00589 Phage integrase family AMD09_RS12190 PF13356 Domain of unknown function (DUF4102) AMD09_RS12190 PF14659 Phage integrase, N-terminal SAM-like domain AMD09_RS12195 PF06250 AMD09_RS12195 AMD09_RS12200 PF01527 Transposase AMD09_RS12210 PF13333 AMD09_RS12210 AMD09_RS12225 PF01695 IstB-like ATP binding protein AMD09_RS12240 PF01609 Transposase DDE domain AMD09_RS12250 PF08845 AMD09_RS12250 AMD09_RS12265 PF00069 Protein kinase domain AMD09_RS12270 PF00593 TonB dependent receptor AMD09_RS12270 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS12280 PF01618 AMD09_RS12280 AMD09_RS12285 PF00691 OmpA family AMD09_RS12285 PF13677 AMD09_RS12285 AMD09_RS12290 PF13614 AAA domain AMD09_RS12295 PF01584 CheW-like domain AMD09_RS12300 PF13466 STAS domain AMD09_RS12305 PF00072 Response regulator receiver domain AMD09_RS12310 PF01584 CheW-like domain AMD09_RS12310 PF01627 Hpt domain AMD09_RS12310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS12310 PF02895 Signal transducing histidine kinase, homodimeric domain AMD09_RS12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12315 PF00672 HAMP domain AMD09_RS12315 PF12729 AMD09_RS12315 AMD09_RS12325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12325 PF00672 HAMP domain AMD09_RS12325 PF17200 AMD09_RS12325 AMD09_RS12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12330 PF00672 HAMP domain AMD09_RS12330 PF02743 Cache domain AMD09_RS12335 PF13557 AMD09_RS12335 AMD09_RS12340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12345 PF00672 HAMP domain AMD09_RS12345 PF12729 AMD09_RS12345 AMD09_RS12350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12350 PF00672 HAMP domain AMD09_RS12350 PF12729 AMD09_RS12350 AMD09_RS12355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12355 PF00672 HAMP domain AMD09_RS12355 PF05227 CHASE3 domain AMD09_RS12365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12365 PF00672 HAMP domain AMD09_RS12365 PF12729 AMD09_RS12365 AMD09_RS12370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12370 PF00672 HAMP domain AMD09_RS12375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12375 PF00672 HAMP domain AMD09_RS12375 PF12729 AMD09_RS12375 AMD09_RS12380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12380 PF00672 HAMP domain AMD09_RS12380 PF12729 AMD09_RS12380 AMD09_RS12385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12385 PF00672 HAMP domain AMD09_RS12385 PF17201 AMD09_RS12385 AMD09_RS12390 PF07238 PilZ domain AMD09_RS12390 PF07317 Flagellar regulator YcgR AMD09_RS12395 PF01584 CheW-like domain AMD09_RS12405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS12405 PF00672 HAMP domain AMD09_RS12405 PF12729 AMD09_RS12405 AMD09_RS12410 PF01739 CheR methyltransferase, SAM binding domain AMD09_RS12410 PF03705 CheR methyltransferase, all-alpha domain AMD09_RS12415 PF03975 CheD chemotactic sensory transduction AMD09_RS12420 PF00072 Response regulator receiver domain AMD09_RS12420 PF01339 CheB methylesterase AMD09_RS12425 PF00563 EAL domain AMD09_RS12425 PF00990 GGDEF domain AMD09_RS12425 PF13185 GAF domain AMD09_RS12425 PF13426 PAS domain AMD09_RS12430 PF00561 alpha/beta hydrolase fold AMD09_RS12435 PF00330 Aconitase family (aconitate hydratase) AMD09_RS12435 PF06434 Aconitate hydratase 2 N-terminus AMD09_RS12435 PF11791 Aconitate B N-terminal domain AMD09_RS12440 PF01850 PIN domain AMD09_RS12445 PF04014 Antidote-toxin recognition MazE AMD09_RS12450 PF00330 Aconitase family (aconitate hydratase) AMD09_RS12450 PF00694 Aconitase C-terminal domain AMD09_RS12460 PF00501 AMP-binding enzyme AMD09_RS12460 PF13193 AMP-binding enzyme C-terminal domain AMD09_RS12465 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS12470 PF00072 Response regulator receiver domain AMD09_RS12470 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS12470 PF01627 Hpt domain AMD09_RS12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS12475 PF00072 Response regulator receiver domain AMD09_RS12475 PF01966 HD domain AMD09_RS12480 PF00152 tRNA synthetases class II (D, K and N) AMD09_RS12480 PF01336 OB-fold nucleic acid binding domain AMD09_RS12485 PF00472 RF-1 domain AMD09_RS12485 PF03462 PCRF domain AMD09_RS12490 PF04397 LytTr DNA-binding domain AMD09_RS12495 PF01757 AMD09_RS12495 AMD09_RS12505 PF13683 AMD09_RS12505 AMD09_RS12520 PF15649 AMD09_RS12520 AMD09_RS12530 PF05593 AMD09_RS12530 AMD09_RS12535 PF01368 DHH family AMD09_RS12535 PF02272 DHHA1 domain AMD09_RS12545 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD09_RS12545 PF03449 Transcription elongation factor, N-terminal AMD09_RS12550 PF02142 MGS-like domain AMD09_RS12550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD09_RS12550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD09_RS12560 PF00117 Glutamine amidotransferase class-I AMD09_RS12560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD09_RS12565 PF01113 Dihydrodipicolinate reductase, N-terminus AMD09_RS12565 PF05173 Dihydrodipicolinate reductase, C-terminus AMD09_RS12570 PF03473 MOSC domain AMD09_RS12570 PF03475 3-alpha domain AMD09_RS12575 PF00155 Aminotransferase class I and II AMD09_RS12590 PF02421 Ferrous iron transport protein B AMD09_RS12590 PF07664 AMD09_RS12590 AMD09_RS12590 PF07670 Nucleoside recognition AMD09_RS12595 PF04023 FeoA domain AMD09_RS12600 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS12605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS12610 PF00682 HMGL-like AMD09_RS12615 PF00106 short chain dehydrogenase AMD09_RS12620 PF01132 Elongation factor P (EF-P) OB domain AMD09_RS12620 PF08207 Elongation factor P (EF-P) KOW-like domain AMD09_RS12620 PF09285 Elongation factor P, C-terminal AMD09_RS12630 PF13387 AMD09_RS12630 AMD09_RS12635 PF09498 AMD09_RS12635 AMD09_RS12640 PF01565 FAD binding domain AMD09_RS12640 PF02913 FAD linked oxidases, C-terminal domain AMD09_RS12645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD09_RS12645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD09_RS12650 PF00293 NUDIX domain AMD09_RS12655 PF13520 Amino acid permease AMD09_RS12660 PF13520 Amino acid permease AMD09_RS12665 PF00596 Class II Aldolase and Adducin N-terminal domain AMD09_RS12670 PF03079 ARD/ARD' family AMD09_RS12680 PF01650 Peptidase C13 family AMD09_RS12685 PF00149 Calcineurin-like phosphoesterase AMD09_RS12685 PF16370 AMD09_RS12685 AMD09_RS12685 PF16371 AMD09_RS12685 AMD09_RS12690 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD09_RS12690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD09_RS12695 PF00977 Histidine biosynthesis protein AMD09_RS12700 PF00977 Histidine biosynthesis protein AMD09_RS12705 PF00117 Glutamine amidotransferase class-I AMD09_RS12710 PF00475 Imidazoleglycerol-phosphate dehydratase AMD09_RS12710 PF13242 HAD-hyrolase-like AMD09_RS12715 PF00155 Aminotransferase class I and II AMD09_RS12720 PF00815 Histidinol dehydrogenase AMD09_RS12725 PF01634 ATP phosphoribosyltransferase AMD09_RS12725 PF08029 HisG, C-terminal domain AMD09_RS12730 PF01371 Trp repressor protein AMD09_RS12735 PF03129 Anticodon binding domain AMD09_RS12735 PF13393 Histidyl-tRNA synthetase AMD09_RS12740 PF00027 Cyclic nucleotide-binding domain AMD09_RS12740 PF13545 Crp-like helix-turn-helix domain AMD09_RS12745 PF13645 AMD09_RS12745 AMD09_RS12750 PF00291 Pyridoxal-phosphate dependent enzyme AMD09_RS12750 PF14821 Threonine synthase N terminus AMD09_RS12755 PF07110 EthD domain AMD09_RS12760 PF00288 GHMP kinases N terminal domain AMD09_RS12760 PF08544 GHMP kinases C terminal AMD09_RS12765 PF00696 Amino acid kinase family AMD09_RS12765 PF00742 Homoserine dehydrogenase AMD09_RS12765 PF03447 Homoserine dehydrogenase, NAD binding domain AMD09_RS12765 PF13840 ACT domain AMD09_RS12770 PF03073 TspO/MBR family AMD09_RS12775 PF05594 AMD09_RS12775 AMD09_RS12780 PF05594 AMD09_RS12780 AMD09_RS12780 PF13332 AMD09_RS12780 AMD09_RS12785 PF05594 AMD09_RS12785 AMD09_RS12785 PF05860 haemagglutination activity domain AMD09_RS12785 PF13332 AMD09_RS12785 AMD09_RS12790 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD09_RS12790 PF08479 POTRA domain, ShlB-type AMD09_RS12795 PF13432 Tetratricopeptide repeat AMD09_RS12795 PF14559 Tetratricopeptide repeat AMD09_RS12800 PF01522 Polysaccharide deacetylase AMD09_RS12800 PF14883 Hypothetical glycosyl hydrolase family 13 AMD09_RS12805 PF13641 Glycosyltransferase like family 2 AMD09_RS12810 PF13994 AMD09_RS12810 AMD09_RS12820 PF00171 Aldehyde dehydrogenase family AMD09_RS12825 PF13828 AMD09_RS12825 AMD09_RS12830 PF08241 Methyltransferase domain AMD09_RS12835 PF01180 Dihydroorotate dehydrogenase AMD09_RS12840 PF01565 FAD binding domain AMD09_RS12840 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD09_RS12845 PF00892 EamA-like transporter family AMD09_RS12850 PF01177 Asp/Glu/Hydantoin racemase AMD09_RS12855 PF07690 Major Facilitator Superfamily AMD09_RS12860 PF01569 PAP2 superfamily AMD09_RS12865 PF04551 GcpE protein AMD09_RS12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS12875 PF00072 Response regulator receiver domain AMD09_RS12875 PF02954 Bacterial regulatory protein, Fis family AMD09_RS12880 PF00150 Cellulase (glycosyl hydrolase family 5) AMD09_RS12885 PF00563 EAL domain AMD09_RS12885 PF00990 GGDEF domain AMD09_RS12885 PF01590 GAF domain AMD09_RS12890 PF00474 Sodium:solute symporter family AMD09_RS12895 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD09_RS12895 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD09_RS12900 PF05787 Bacterial protein of unknown function (DUF839) AMD09_RS12910 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD09_RS12915 PF00342 Phosphoglucose isomerase AMD09_RS12920 PF02261 Aspartate decarboxylase AMD09_RS12925 PF02569 Pantoate-beta-alanine ligase AMD09_RS12930 PF02548 Ketopantoate hydroxymethyltransferase AMD09_RS12935 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD09_RS12940 PF01743 Poly A polymerase head domain AMD09_RS12940 PF12626 Polymerase A arginine-rich C-terminus AMD09_RS12940 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD09_RS12950 PF02649 Type I GTP cyclohydrolase folE2 AMD09_RS12955 PF01520 N-acetylmuramoyl-L-alanine amidase AMD09_RS12955 PF11741 AMIN domain AMD09_RS12960 PF00128 Alpha amylase, catalytic domain AMD09_RS12965 PF01527 Transposase AMD09_RS12970 PF13683 AMD09_RS12970 AMD09_RS12985 PF01471 Putative peptidoglycan binding domain AMD09_RS12995 PF04610 AMD09_RS12995 AMD09_RS13005 PF03135 AMD09_RS13005 AMD09_RS13010 PF05101 AMD09_RS13010 AMD09_RS13015 PF04956 AMD09_RS13015 AMD09_RS13020 PF01464 Transglycosylase SLT domain AMD09_RS13025 PF00437 Type II/IV secretion system protein AMD09_RS13030 PF03743 Bacterial conjugation TrbI-like protein AMD09_RS13035 PF03524 Conjugal transfer protein AMD09_RS13040 PF04335 VirB8 protein AMD09_RS13045 PF10671 Toxin co-regulated pilus biosynthesis protein Q AMD09_RS13050 PF02534 Type IV secretory system Conjugative DNA transfer AMD09_RS13065 PF00271 Helicase conserved C-terminal domain AMD09_RS13065 PF02151 UvrB/uvrC motif AMD09_RS13065 PF04851 Type III restriction enzyme, res subunit AMD09_RS13065 PF12344 Ultra-violet resistance protein B AMD09_RS13100 PF01527 Transposase AMD09_RS13110 PF13333 AMD09_RS13110 AMD09_RS13115 PF13936 Helix-turn-helix domain AMD09_RS13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS13140 PF03466 LysR substrate binding domain AMD09_RS13145 PF02525 Flavodoxin-like fold AMD09_RS13150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD09_RS13150 PF02403 Seryl-tRNA synthetase N-terminal domain AMD09_RS13155 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS13160 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS13165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD09_RS13170 PF00800 Prephenate dehydratase AMD09_RS13170 PF01817 Chorismate mutase type II AMD09_RS13170 PF01842 ACT domain AMD09_RS13175 PF00266 Aminotransferase class-V AMD09_RS13180 PF00174 Oxidoreductase molybdopterin binding domain AMD09_RS13185 PF01794 AMD09_RS13185 AMD09_RS13190 PF16697 AMD09_RS13190 AMD09_RS13195 PF09650 AMD09_RS13195 AMD09_RS13200 PF05597 AMD09_RS13200 AMD09_RS13210 PF04471 Restriction endonuclease AMD09_RS13215 PF00392 Bacterial regulatory proteins, gntR family AMD09_RS13215 PF07702 UTRA domain AMD09_RS13225 PF01979 Amidohydrolase family AMD09_RS13230 PF07969 Amidohydrolase family AMD09_RS13235 PF00221 Aromatic amino acid lyase AMD09_RS13240 PF05013 N-formylglutamate amidohydrolase AMD09_RS13245 PF01175 Urocanase AMD09_RS13255 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD09_RS13255 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD09_RS13260 PF01008 Initiation factor 2 subunit family AMD09_RS13265 PF11218 AMD09_RS13265 AMD09_RS13270 PF00152 tRNA synthetases class II (D, K and N) AMD09_RS13275 PF00533 BRCA1 C Terminus (BRCT) domain AMD09_RS13275 PF01653 NAD-dependent DNA ligase adenylation domain AMD09_RS13275 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD09_RS13275 PF03120 NAD-dependent DNA ligase OB-fold domain AMD09_RS13275 PF12826 Helix-hairpin-helix motif AMD09_RS13280 PF00155 Aminotransferase class I and II AMD09_RS13290 PF04354 ZipA, C-terminal FtsZ-binding domain AMD09_RS13295 PF02463 RecF/RecN/SMC N terminal domain AMD09_RS13300 PF01281 Ribosomal protein L9, N-terminal domain AMD09_RS13300 PF03948 Ribosomal protein L9, C-terminal domain AMD09_RS13305 PF01084 Ribosomal protein S18 AMD09_RS13310 PF01250 Ribosomal protein S6 AMD09_RS13315 PF01521 Iron-sulphur cluster biosynthesis AMD09_RS13320 PF00152 tRNA synthetases class II (D, K and N) AMD09_RS13320 PF01336 OB-fold nucleic acid binding domain AMD09_RS13340 PF04299 Putative FMN-binding domain AMD09_RS13350 PF00161 Ribosome inactivating protein AMD09_RS13355 PF00072 Response regulator receiver domain AMD09_RS13355 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS13385 PF11655 AMD09_RS13385 AMD09_RS13390 PF11655 AMD09_RS13390 AMD09_RS13395 PF05838 Glycosyl hydrolase 108 AMD09_RS13395 PF09374 Predicted Peptidoglycan domain AMD09_RS13400 PF00484 Carbonic anhydrase AMD09_RS13405 PF06052 3-hydroxyanthranilic acid dioxygenase AMD09_RS13410 PF12805 AMD09_RS13410 AMD09_RS13410 PF13515 AMD09_RS13410 AMD09_RS13415 PF00266 Aminotransferase class-V AMD09_RS13420 PF01494 FAD binding domain AMD09_RS13425 PF00929 Exonuclease AMD09_RS13425 PF08411 Exonuclease C-terminal AMD09_RS13430 PF09365 AMD09_RS13430 AMD09_RS13440 PF11159 AMD09_RS13440 AMD09_RS13445 PF06189 AMD09_RS13445 AMD09_RS13450 PF01513 ATP-NAD kinase AMD09_RS13455 PF01170 Putative RNA methylase family UPF0020 AMD09_RS13455 PF02926 THUMP domain AMD09_RS13455 PF10672 S-adenosylmethionine-dependent methyltransferase AMD09_RS13460 PF00005 ABC transporter AMD09_RS13465 PF00583 Acetyltransferase (GNAT) family AMD09_RS13470 PF05728 Uncharacterised protein family (UPF0227) AMD09_RS13475 PF03473 MOSC domain AMD09_RS13480 PF01510 N-acetylmuramoyl-L-alanine amidase AMD09_RS13485 PF07920 Protein of unknown function (DUF1684) AMD09_RS13490 PF00581 Rhodanese-like domain AMD09_RS13495 PF00293 NUDIX domain AMD09_RS13495 PF06945 AMD09_RS13495 AMD09_RS13500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD09_RS13500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD09_RS13505 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS13515 PF00633 Helix-hairpin-helix motif AMD09_RS13515 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD09_RS13520 PF00916 AMD09_RS13520 AMD09_RS13525 PF00484 Carbonic anhydrase AMD09_RS13535 PF07396 Phosphate-selective porin O and P AMD09_RS13540 PF12849 PBP superfamily domain AMD09_RS13545 PF12849 PBP superfamily domain AMD09_RS13550 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS13555 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS13560 PF00005 ABC transporter AMD09_RS13565 PF01895 PhoU domain AMD09_RS13570 PF11776 Domain of unknown function (DUF3315) AMD09_RS13575 PF00929 Exonuclease AMD09_RS13580 PF00990 GGDEF domain AMD09_RS13580 PF07494 Two component regulator propeller AMD09_RS13580 PF07495 Y_Y_Y domain AMD09_RS13585 PF00588 SpoU rRNA Methylase family AMD09_RS13585 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD09_RS13590 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD09_RS13595 PF00575 S1 RNA binding domain AMD09_RS13595 PF00773 RNB domain AMD09_RS13595 PF08206 Ribonuclease B OB domain AMD09_RS13605 PF13472 GDSL-like Lipase/Acylhydrolase family AMD09_RS13610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS13610 PF02770 Acyl-CoA dehydrogenase, middle domain AMD09_RS13610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD09_RS13615 PF01022 Bacterial regulatory protein, arsR family AMD09_RS13615 PF08241 Methyltransferase domain AMD09_RS13620 PF02574 Homocysteine S-methyltransferase AMD09_RS13625 PF00809 Pterin binding enzyme AMD09_RS13625 PF02310 B12 binding domain AMD09_RS13625 PF02607 B12 binding domain AMD09_RS13625 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD09_RS13630 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) AMD09_RS13635 PF00294 pfkB family carbohydrate kinase AMD09_RS13640 PF07690 Major Facilitator Superfamily AMD09_RS13645 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS13645 PF13377 Periplasmic binding protein-like domain AMD09_RS13650 PF13557 AMD09_RS13650 AMD09_RS13655 PF09831 AMD09_RS13655 AMD09_RS13660 PF04102 SlyX AMD09_RS13665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD09_RS13665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD09_RS13665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD09_RS13670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD09_RS13670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD09_RS13675 PF00255 Glutathione peroxidase AMD09_RS13680 PF00392 Bacterial regulatory proteins, gntR family AMD09_RS13685 PF00005 ABC transporter AMD09_RS13700 PF11101 AMD09_RS13700 AMD09_RS13710 PF00206 Lyase AMD09_RS13710 PF10415 Fumarase C C-terminus AMD09_RS13715 PF00571 CBS domain AMD09_RS13715 PF01595 AMD09_RS13715 AMD09_RS13715 PF03471 Transporter associated domain AMD09_RS13720 PF00188 Cysteine-rich secretory protein family AMD09_RS13725 PF00206 Lyase AMD09_RS13725 PF08328 Adenylosuccinate lyase C-terminal AMD09_RS13730 PF11259 AMD09_RS13730 AMD09_RS13735 PF08007 Cupin superfamily protein AMD09_RS13740 PF13673 Acetyltransferase (GNAT) domain AMD09_RS13745 PF00676 Dehydrogenase E1 component AMD09_RS13745 PF02779 Transketolase, pyrimidine binding domain AMD09_RS13745 PF16078 AMD09_RS13745 AMD09_RS13745 PF16870 AMD09_RS13745 AMD09_RS13750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD09_RS13750 PF00364 Biotin-requiring enzyme AMD09_RS13750 PF02817 e3 binding domain AMD09_RS13755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD09_RS13755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS13760 PF03641 Possible lysine decarboxylase AMD09_RS13765 PF01205 Uncharacterized protein family UPF0029 AMD09_RS13765 PF09186 Domain of unknown function (DUF1949) AMD09_RS13770 PF00005 ABC transporter AMD09_RS13770 PF00664 ABC transporter transmembrane region AMD09_RS13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS13775 PF03466 LysR substrate binding domain AMD09_RS13785 PF16576 AMD09_RS13785 AMD09_RS13790 PF02321 Outer membrane efflux protein AMD09_RS13800 PF01842 ACT domain AMD09_RS13800 PF02153 Prephenate dehydrogenase AMD09_RS13805 PF08543 Phosphomethylpyrimidine kinase AMD09_RS13810 PF00226 DnaJ domain AMD09_RS13810 PF00684 DnaJ central domain AMD09_RS13810 PF01556 DnaJ C terminal domain AMD09_RS13815 PF00012 Hsp70 protein AMD09_RS13820 PF01025 GrpE AMD09_RS13825 PF01628 HrcA protein C terminal domain AMD09_RS13825 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD09_RS13830 PF02463 RecF/RecN/SMC N terminal domain AMD09_RS13835 PF01475 Ferric uptake regulator family AMD09_RS13840 PF04355 SmpA / OmlA family AMD09_RS13845 PF03658 RnfH family Ubiquitin AMD09_RS13850 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD09_RS13855 PF01668 SmpB protein AMD09_RS13860 PF00082 Subtilase family AMD09_RS13880 PF13910 AMD09_RS13880 AMD09_RS13885 PF03389 MobA/MobL family AMD09_RS13890 PF00665 Integrase core domain AMD09_RS13895 PF01527 Transposase AMD09_RS13905 PF01381 Helix-turn-helix AMD09_RS13920 PF05598 AMD09_RS13920 AMD09_RS13925 PF00589 Phage integrase family AMD09_RS13935 PF00816 H-NS histone family AMD09_RS13945 PF06114 Domain of unknown function (DUF955) AMD09_RS13950 PF01381 Helix-turn-helix AMD09_RS13965 PF00990 GGDEF domain AMD09_RS13965 PF05227 CHASE3 domain AMD09_RS13965 PF13185 GAF domain AMD09_RS13975 PF00990 GGDEF domain AMD09_RS13980 PF02321 Outer membrane efflux protein AMD09_RS13985 PF00106 short chain dehydrogenase AMD09_RS13990 PF00873 AcrB/AcrD/AcrF family AMD09_RS13995 PF16576 AMD09_RS13995 AMD09_RS14000 PF00106 short chain dehydrogenase AMD09_RS14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS14010 PF03466 LysR substrate binding domain AMD09_RS14015 PF00691 OmpA family AMD09_RS14015 PF13488 AMD09_RS14015 AMD09_RS14020 PF00875 DNA photolyase AMD09_RS14020 PF03441 FAD binding domain of DNA photolyase AMD09_RS14025 PF00772 DnaB-like helicase N terminal domain AMD09_RS14025 PF03796 DnaB-like helicase C terminal domain AMD09_RS14030 PF03358 NADPH-dependent FMN reductase AMD09_RS14035 PF00733 Asparagine synthase AMD09_RS14035 PF13537 Glutamine amidotransferase domain AMD09_RS14045 PF00043 Glutathione S-transferase, C-terminal domain AMD09_RS14045 PF02798 Glutathione S-transferase, N-terminal domain AMD09_RS14050 PF01841 Transglutaminase-like superfamily AMD09_RS14050 PF12969 Domain of Unknown Function with PDB structure (DUF3857) AMD09_RS14055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS14055 PF02770 Acyl-CoA dehydrogenase, middle domain AMD09_RS14055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD09_RS14060 PF05433 AMD09_RS14060 AMD09_RS14070 PF01026 TatD related DNase AMD09_RS14075 PF00899 ThiF family AMD09_RS14080 PF01322 Cytochrome C' AMD09_RS14085 PF05433 AMD09_RS14085 AMD09_RS14090 PF00313 'Cold-shock' DNA-binding domain AMD09_RS14095 PF04306 AMD09_RS14095 AMD09_RS14100 PF02253 Phospholipase A1 AMD09_RS14105 PF00484 Carbonic anhydrase AMD09_RS14110 PF02798 Glutathione S-transferase, N-terminal domain AMD09_RS14110 PF14497 Glutathione S-transferase, C-terminal domain AMD09_RS14115 PF05681 AMD09_RS14115 AMD09_RS14115 PF05683 Fumarase C-terminus AMD09_RS14120 PF00005 ABC transporter AMD09_RS14125 PF00175 Oxidoreductase NAD-binding domain AMD09_RS14125 PF00970 Oxidoreductase FAD-binding domain AMD09_RS14130 PF00255 Glutathione peroxidase AMD09_RS14135 PF01432 Peptidase family M3 AMD09_RS14140 PF01047 MarR family AMD09_RS14145 PF13739 Domain of unknown function (DUF4163) AMD09_RS14150 PF14542 GCN5-related N-acetyl-transferase AMD09_RS14160 PF01694 Rhomboid family AMD09_RS14165 PF00854 POT family AMD09_RS14170 PF00246 Zinc carboxypeptidase AMD09_RS14175 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD09_RS14175 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD09_RS14175 PF14310 Fibronectin type III-like domain AMD09_RS14185 PF07690 Major Facilitator Superfamily AMD09_RS14190 PF00529 HlyD family secretion protein AMD09_RS14190 PF16576 AMD09_RS14190 AMD09_RS14195 PF02321 Outer membrane efflux protein AMD09_RS14200 PF01047 MarR family AMD09_RS14205 PF02311 AraC-like ligand binding domain AMD09_RS14205 PF12833 Helix-turn-helix domain AMD09_RS14210 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD09_RS14210 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD09_RS14220 PF05724 Thiopurine S-methyltransferase (TPMT) AMD09_RS14225 PF00210 Ferritin-like domain AMD09_RS14230 PF01804 Penicillin amidase AMD09_RS14235 PF00593 TonB dependent receptor AMD09_RS14235 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS14240 PF13229 Right handed beta helix region AMD09_RS14245 PF00733 Asparagine synthase AMD09_RS14245 PF13537 Glutamine amidotransferase domain AMD09_RS14250 PF01546 Peptidase family M20/M25/M40 AMD09_RS14250 PF07687 Peptidase dimerisation domain AMD09_RS14255 PF03960 ArsC family AMD09_RS14260 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS14260 PF14602 Hexapeptide repeat of succinyl-transferase AMD09_RS14260 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD09_RS14265 PF01909 Nucleotidyltransferase domain AMD09_RS14265 PF01966 HD domain AMD09_RS14265 PF08335 GlnD PII-uridylyltransferase AMD09_RS14270 PF00557 Metallopeptidase family M24 AMD09_RS14275 PF05229 AMD09_RS14275 AMD09_RS14280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD09_RS14285 PF00577 Outer membrane usher protein AMD09_RS14285 PF13953 PapC C-terminal domain AMD09_RS14290 PF05229 AMD09_RS14290 AMD09_RS14300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD09_RS14305 PF00318 Ribosomal protein S2 AMD09_RS14310 PF00889 Elongation factor TS AMD09_RS14315 PF00990 GGDEF domain AMD09_RS14315 PF08668 HDOD domain AMD09_RS14320 PF00696 Amino acid kinase family AMD09_RS14325 PF01765 Ribosome recycling factor AMD09_RS14330 PF01255 Putative undecaprenyl diphosphate synthase AMD09_RS14335 PF01148 Cytidylyltransferase family AMD09_RS14340 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD09_RS14340 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AMD09_RS14340 PF13288 DXP reductoisomerase C-terminal domain AMD09_RS14345 PF02163 Peptidase family M50 AMD09_RS14350 PF01103 Surface antigen AMD09_RS14350 PF07244 Surface antigen variable number repeat AMD09_RS14360 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS14360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD09_RS14365 PF07977 FabA-like domain AMD09_RS14370 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS14370 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD09_RS14375 PF02684 AMD09_RS14375 AMD09_RS14380 PF01351 Ribonuclease HII AMD09_RS14385 PF01336 OB-fold nucleic acid binding domain AMD09_RS14385 PF02811 PHP domain AMD09_RS14385 PF07733 Bacterial DNA polymerase III alpha subunit AMD09_RS14385 PF14579 Helix-hairpin-helix motif AMD09_RS14390 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD09_RS14395 PF14559 Tetratricopeptide repeat AMD09_RS14405 PF03653 AMD09_RS14405 AMD09_RS14410 PF13489 Methyltransferase domain AMD09_RS14415 PF06850 AMD09_RS14415 AMD09_RS14420 PF13796 AMD09_RS14420 AMD09_RS14425 PF03551 Transcriptional regulator PadR-like family AMD09_RS14430 PF13372 Alginate export AMD09_RS14440 PF04367 AMD09_RS14440 AMD09_RS14445 PF02592 AMD09_RS14445 AMD09_RS14450 PF05960 Bacterial protein of unknown function (DUF885) AMD09_RS14455 PF02574 Homocysteine S-methyltransferase AMD09_RS14460 PF00324 Amino acid permease AMD09_RS14465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS14470 PF00005 ABC transporter AMD09_RS14475 PF01433 Peptidase family M1 AMD09_RS14475 PF12679 AMD09_RS14475 AMD09_RS14480 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD09_RS14485 PF01588 Putative tRNA binding domain AMD09_RS14485 PF09334 tRNA synthetases class I (M) AMD09_RS14490 PF12710 haloacid dehalogenase-like hydrolase AMD09_RS14495 PF04060 Putative Fe-S cluster AMD09_RS14495 PF14697 4Fe-4S dicluster domain AMD09_RS14515 PF04542 Sigma-70 region 2 AMD09_RS14515 PF08281 Sigma-70, region 4 AMD09_RS14520 PF10099 AMD09_RS14520 AMD09_RS14525 PF00487 AMD09_RS14525 AMD09_RS14530 PF01593 Flavin containing amine oxidoreductase AMD09_RS14535 PF07103 AMD09_RS14535 AMD09_RS14540 PF02353 Mycolic acid cyclopropane synthetase AMD09_RS14545 PF11086 AMD09_RS14545 AMD09_RS14550 PF06966 AMD09_RS14550 AMD09_RS14555 PF02353 Mycolic acid cyclopropane synthetase AMD09_RS14560 PF01042 Endoribonuclease L-PSP AMD09_RS14565 PF06197 AMD09_RS14565 AMD09_RS14570 PF03706 AMD09_RS14570 AMD09_RS14570 PF09924 Uncharacterized conserved protein (DUF2156) AMD09_RS14575 PF06057 Bacterial virulence protein (VirJ) AMD09_RS14580 PF09791 AMD09_RS14580 AMD09_RS14590 PF13563 2'-5' RNA ligase superfamily AMD09_RS14595 PF09537 Domain of unknown function (DUF2383) AMD09_RS14605 PF07690 Major Facilitator Superfamily AMD09_RS14610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD09_RS14615 PF03831 PhnA protein AMD09_RS14615 PF08274 PhnA Zinc-Ribbon AMD09_RS14620 PF01545 Cation efflux family AMD09_RS14625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD09_RS14630 PF06723 MreB/Mbl protein AMD09_RS14645 PF00924 Mechanosensitive ion channel AMD09_RS14650 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD09_RS14655 PF10982 Protein of unknown function (DUF2789) AMD09_RS14660 PF07043 AMD09_RS14660 AMD09_RS14665 PF01863 Protein of unknown function DUF45 AMD09_RS14670 PF13640 2OG-Fe(II) oxygenase superfamily AMD09_RS14675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD09_RS14675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD09_RS14680 PF00082 Subtilase family AMD09_RS14680 PF03797 Autotransporter beta-domain AMD09_RS14680 PF12951 AMD09_RS14680 AMD09_RS14685 PF00108 Thiolase, N-terminal domain AMD09_RS14685 PF02803 Thiolase, C-terminal domain AMD09_RS14700 PF00990 GGDEF domain AMD09_RS14700 PF05227 CHASE3 domain AMD09_RS14700 PF13185 GAF domain AMD09_RS14705 PF04519 AMD09_RS14705 AMD09_RS14725 PF01068 ATP dependent DNA ligase domain AMD09_RS14725 PF04675 DNA ligase N terminus AMD09_RS14725 PF04679 ATP dependent DNA ligase C terminal region AMD09_RS14730 PF00270 DEAD/DEAH box helicase AMD09_RS14730 PF00271 Helicase conserved C-terminal domain AMD09_RS14730 PF08494 AMD09_RS14730 AMD09_RS14735 PF00149 Calcineurin-like phosphoesterase AMD09_RS14740 PF01494 FAD binding domain AMD09_RS14745 PF00313 'Cold-shock' DNA-binding domain AMD09_RS14750 PF01048 Phosphorylase superfamily AMD09_RS14755 PF00156 Phosphoribosyl transferase domain AMD09_RS14760 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD09_RS14765 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD09_RS14770 PF13450 NAD(P)-binding Rossmann-like domain AMD09_RS14775 PF01323 DSBA-like thioredoxin domain AMD09_RS14780 PF01928 CYTH domain AMD09_RS14785 PF05958 tRNA (Uracil-5-)-methyltransferase AMD09_RS14790 PF00072 Response regulator receiver domain AMD09_RS14790 PF01627 Hpt domain AMD09_RS14795 PF02565 Recombination protein O C terminal AMD09_RS14795 PF11967 Recombination protein O N terminal AMD09_RS14800 PF01926 50S ribosome-binding GTPase AMD09_RS14800 PF07650 KH domain AMD09_RS14805 PF00035 Double-stranded RNA binding motif AMD09_RS14805 PF14622 Ribonuclease-III-like AMD09_RS14810 PF16137 AMD09_RS14810 AMD09_RS14815 PF00717 Peptidase S24-like AMD09_RS14820 PF00009 Elongation factor Tu GTP binding domain AMD09_RS14820 PF00679 Elongation factor G C-terminus AMD09_RS14820 PF03144 Elongation factor Tu domain 2 AMD09_RS14820 PF06421 GTP-binding protein LepA C-terminus AMD09_RS14825 PF13180 PDZ domain AMD09_RS14825 PF13365 Trypsin-like peptidase domain AMD09_RS14830 PF03872 Anti sigma-E protein RseA, N-terminal domain AMD09_RS14835 PF04542 Sigma-70 region 2 AMD09_RS14835 PF08281 Sigma-70, region 4 AMD09_RS14840 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS14840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD09_RS14840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD09_RS14845 PF01545 Cation efflux family AMD09_RS14850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD09_RS14850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD09_RS14855 PF16113 AMD09_RS14855 AMD09_RS14860 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS14865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS14865 PF02770 Acyl-CoA dehydrogenase, middle domain AMD09_RS14865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD09_RS14870 PF00171 Aldehyde dehydrogenase family AMD09_RS14875 PF06114 Domain of unknown function (DUF955) AMD09_RS14875 PF09856 AMD09_RS14875 AMD09_RS14875 PF13560 Helix-turn-helix domain AMD09_RS14880 PF00593 TonB dependent receptor AMD09_RS14880 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS14885 PF07745 Glycosyl hydrolase family 53 AMD09_RS14890 PF00703 Glycosyl hydrolases family 2 AMD09_RS14890 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD09_RS14890 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD09_RS14890 PF16355 AMD09_RS14890 AMD09_RS14900 PF00754 F5/8 type C domain AMD09_RS14900 PF01120 Alpha-L-fucosidase AMD09_RS14905 PF14085 AMD09_RS14905 AMD09_RS14910 PF16158 AMD09_RS14910 AMD09_RS14915 PF05593 AMD09_RS14915 AMD09_RS14920 PF00488 MutS domain V AMD09_RS14920 PF01624 MutS domain I AMD09_RS14920 PF05188 MutS domain II AMD09_RS14920 PF05190 MutS family domain IV AMD09_RS14920 PF05192 MutS domain III AMD09_RS14925 PF06078 Bacterial protein of unknown function (DUF937) AMD09_RS14930 PF00141 Peroxidase AMD09_RS14935 PF01479 S4 domain AMD09_RS14940 PF00043 Glutathione S-transferase, C-terminal domain AMD09_RS14940 PF13417 Glutathione S-transferase, N-terminal domain AMD09_RS14945 PF08279 HTH domain AMD09_RS14945 PF13280 AMD09_RS14945 AMD09_RS14955 PF01554 MatE AMD09_RS14960 PF01245 Ribosomal protein L19 AMD09_RS14965 PF01746 tRNA (Guanine-1)-methyltransferase AMD09_RS14970 PF01782 RimM N-terminal domain AMD09_RS14970 PF05239 PRC-barrel domain AMD09_RS14975 PF00886 Ribosomal protein S16 AMD09_RS14980 PF01063 Aminotransferase class IV AMD09_RS14985 PF03060 Nitronate monooxygenase AMD09_RS14990 PF00448 SRP54-type protein, GTPase domain AMD09_RS14990 PF02881 SRP54-type protein, helical bundle domain AMD09_RS14990 PF02978 Signal peptide binding domain AMD09_RS14995 PF01578 AMD09_RS14995 AMD09_RS15000 PF01263 Aldose 1-epimerase AMD09_RS15010 PF06964 Alpha-L-arabinofuranosidase C-terminus AMD09_RS15015 PF00722 Glycosyl hydrolases family 16 AMD09_RS15020 PF00072 Response regulator receiver domain AMD09_RS15025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15025 PF13426 PAS domain AMD09_RS15030 PF00072 Response regulator receiver domain AMD09_RS15030 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15030 PF13185 GAF domain AMD09_RS15035 PF01739 CheR methyltransferase, SAM binding domain AMD09_RS15035 PF03705 CheR methyltransferase, all-alpha domain AMD09_RS15040 PF01339 CheB methylesterase AMD09_RS15045 PF00072 Response regulator receiver domain AMD09_RS15045 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15050 PF07237 Protein of unknown function (DUF1428) AMD09_RS15055 PF00085 Thioredoxin AMD09_RS15060 PF00593 TonB dependent receptor AMD09_RS15060 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS15065 PF04616 Glycosyl hydrolases family 43 AMD09_RS15070 PF00072 Response regulator receiver domain AMD09_RS15070 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15070 PF08448 PAS fold AMD09_RS15075 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS15075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15080 PF07228 Stage II sporulation protein E (SpoIIE) AMD09_RS15080 PF13581 Histidine kinase-like ATPase domain AMD09_RS15085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15095 PF01740 STAS domain AMD09_RS15095 PF14361 AMD09_RS15095 AMD09_RS15105 PF00183 Hsp90 protein AMD09_RS15105 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15110 PF12833 Helix-turn-helix domain AMD09_RS15115 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS15120 PF05656 AMD09_RS15120 AMD09_RS15125 PF13481 AAA domain AMD09_RS15125 PF13541 Subunit ChlI of Mg-chelatase AMD09_RS15130 PF05299 M61 glycyl aminopeptidase AMD09_RS15130 PF07720 Tetratricopeptide repeat AMD09_RS15135 PF03626 AMD09_RS15135 AMD09_RS15140 PF00510 Cytochrome c oxidase subunit III AMD09_RS15145 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD09_RS15150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD09_RS15150 PF06481 COX Aromatic Rich Motif AMD09_RS15160 PF02401 LytB protein AMD09_RS15165 PF01252 AMD09_RS15165 AMD09_RS15170 PF00133 tRNA synthetases class I (I, L, M and V) AMD09_RS15170 PF06827 Zinc finger found in FPG and IleRS AMD09_RS15170 PF08264 Anticodon-binding domain of tRNA AMD09_RS15175 PF01687 Riboflavin kinase AMD09_RS15175 PF06574 FAD synthetase AMD09_RS15180 PF03023 AMD09_RS15180 AMD09_RS15185 PF01649 Ribosomal protein S20 AMD09_RS15190 PF01018 GTP1/OBG AMD09_RS15190 PF01926 50S ribosome-binding GTPase AMD09_RS15195 PF01016 Ribosomal L27 protein AMD09_RS15200 PF00829 Ribosomal prokaryotic L21 protein AMD09_RS15205 PF00005 ABC transporter AMD09_RS15210 PF13279 Thioesterase-like superfamily AMD09_RS15215 PF04314 Protein of unknown function (DUF461) AMD09_RS15220 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS15225 PF13622 Thioesterase-like superfamily AMD09_RS15230 PF09413 Domain of unknown function (DUF2007) AMD09_RS15240 PF13202 EF hand AMD09_RS15240 PF13499 EF-hand domain pair AMD09_RS15245 PF04376 AMD09_RS15245 AMD09_RS15245 PF04377 AMD09_RS15245 AMD09_RS15250 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS15255 PF02222 ATP-grasp domain AMD09_RS15260 PF01145 SPFH domain / Band 7 family AMD09_RS15275 PF02557 D-alanyl-D-alanine carboxypeptidase AMD09_RS15280 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD09_RS15285 PF04241 AMD09_RS15285 AMD09_RS15290 PF10604 Polyketide cyclase / dehydrase and lipid transport AMD09_RS15295 PF00072 Response regulator receiver domain AMD09_RS15295 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS15300 PF07730 Histidine kinase AMD09_RS15310 PF00583 Acetyltransferase (GNAT) family AMD09_RS15315 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD09_RS15315 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD09_RS15320 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD09_RS15325 PF03776 Septum formation topological specificity factor MinE AMD09_RS15335 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15340 PF00072 Response regulator receiver domain AMD09_RS15340 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS15345 PF13231 AMD09_RS15345 AMD09_RS15350 PF01569 PAP2 superfamily AMD09_RS15355 PF00884 Sulfatase AMD09_RS15355 PF08019 AMD09_RS15355 AMD09_RS15360 PF01401 Angiotensin-converting enzyme AMD09_RS15370 PF07690 Major Facilitator Superfamily AMD09_RS15375 PF02347 Glycine cleavage system P-protein AMD09_RS15380 PF00135 Carboxylesterase family AMD09_RS15385 PF00248 Aldo/keto reductase family AMD09_RS15390 PF00199 Catalase AMD09_RS15390 PF06628 Catalase-related immune-responsive AMD09_RS15400 PF14412 AMD09_RS15400 AMD09_RS15405 PF07791 AMD09_RS15405 AMD09_RS15410 PF08845 AMD09_RS15410 AMD09_RS15415 PF13466 STAS domain AMD09_RS15420 PF01584 CheW-like domain AMD09_RS15420 PF01627 Hpt domain AMD09_RS15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS15420 PF02895 Signal transducing histidine kinase, homodimeric domain AMD09_RS15425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS15430 PF01584 CheW-like domain AMD09_RS15435 PF00072 Response regulator receiver domain AMD09_RS15435 PF00563 EAL domain AMD09_RS15440 PF01739 CheR methyltransferase, SAM binding domain AMD09_RS15440 PF03705 CheR methyltransferase, all-alpha domain AMD09_RS15445 PF00072 Response regulator receiver domain AMD09_RS15445 PF01339 CheB methylesterase AMD09_RS15450 PF13091 PLD-like domain AMD09_RS15455 PF01431 Peptidase family M13 AMD09_RS15455 PF05649 Peptidase family M13 AMD09_RS15465 PF00300 Histidine phosphatase superfamily (branch 1) AMD09_RS15470 PF04493 Endonuclease V AMD09_RS15480 PF02678 Pirin AMD09_RS15480 PF05726 Pirin C-terminal cupin domain AMD09_RS15490 PF02566 OsmC-like protein AMD09_RS15495 PF02678 Pirin AMD09_RS15495 PF05726 Pirin C-terminal cupin domain AMD09_RS15500 PF02554 AMD09_RS15500 AMD09_RS15500 PF13722 AMD09_RS15500 AMD09_RS15505 PF04328 AMD09_RS15505 AMD09_RS15510 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS15515 PF12796 Ankyrin repeats (3 copies) AMD09_RS15520 PF11187 Protein of unknown function (DUF2974) AMD09_RS15525 PF05684 AMD09_RS15525 AMD09_RS15540 PF12804 MobA-like NTP transferase domain AMD09_RS15550 PF02625 XdhC and CoxI family AMD09_RS15550 PF13478 XdhC Rossmann domain AMD09_RS15555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD09_RS15555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD09_RS15560 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD09_RS15560 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD09_RS15565 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD09_RS15565 PF01799 [2Fe-2S] binding domain AMD09_RS15570 PF00107 Zinc-binding dehydrogenase AMD09_RS15570 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS15575 PF00990 GGDEF domain AMD09_RS15575 PF02743 Cache domain AMD09_RS15580 PF00436 Single-strand binding protein family AMD09_RS15585 PF00348 Polyprenyl synthetase AMD09_RS15590 PF01738 Dienelactone hydrolase family AMD09_RS15595 PF02875 Mur ligase family, glutamate ligase domain AMD09_RS15595 PF08245 Mur ligase middle domain AMD09_RS15610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD09_RS15610 PF00696 Amino acid kinase family AMD09_RS15610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD09_RS15615 PF02567 Phenazine biosynthesis-like protein AMD09_RS15620 PF02567 Phenazine biosynthesis-like protein AMD09_RS15625 PF05433 AMD09_RS15625 AMD09_RS15630 PF02566 OsmC-like protein AMD09_RS15635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD09_RS15635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD09_RS15640 PF03652 Uncharacterised protein family (UPF0081) AMD09_RS15645 PF02622 Uncharacterized ACR, COG1678 AMD09_RS15655 PF03352 Methyladenine glycosylase AMD09_RS15660 PF01904 Protein of unknown function DUF72 AMD09_RS15665 PF03211 Pectate lyase AMD09_RS15670 PF00437 Type II/IV secretion system protein AMD09_RS15675 PF00437 Type II/IV secretion system protein AMD09_RS15680 PF01168 Alanine racemase, N-terminal domain AMD09_RS15685 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD09_RS15685 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD09_RS15690 PF00216 Bacterial DNA-binding protein AMD09_RS15695 PF01551 Peptidase family M23 AMD09_RS15700 PF12977 Domain of Unknown Function with PDB structure (DUF3861) AMD09_RS15710 PF07273 Protein of unknown function (DUF1439) AMD09_RS15715 PF01965 DJ-1/PfpI family AMD09_RS15720 PF00856 SET domain AMD09_RS15725 PF02082 Transcriptional regulator AMD09_RS15730 PF01458 Uncharacterized protein family (UPF0051) AMD09_RS15735 PF00005 ABC transporter AMD09_RS15740 PF01458 Uncharacterized protein family (UPF0051) AMD09_RS15745 PF00266 Aminotransferase class-V AMD09_RS15750 PF13673 Acetyltransferase (GNAT) domain AMD09_RS15755 PF00355 Rieske [2Fe-2S] domain AMD09_RS15760 PF00593 TonB dependent receptor AMD09_RS15760 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS15765 PF13640 2OG-Fe(II) oxygenase superfamily AMD09_RS15770 PF08238 Sel1 repeat AMD09_RS15775 PF16357 AMD09_RS15775 AMD09_RS15780 PF10029 AMD09_RS15780 AMD09_RS15785 PF10670 AMD09_RS15785 AMD09_RS15790 PF02424 ApbE family AMD09_RS15795 PF00175 Oxidoreductase NAD-binding domain AMD09_RS15795 PF00258 Flavodoxin AMD09_RS15800 PF13202 EF hand AMD09_RS15800 PF13499 EF-hand domain pair AMD09_RS15805 PF05962 HutD AMD09_RS15810 PF12836 Helix-hairpin-helix motif AMD09_RS15815 PF01546 Peptidase family M20/M25/M40 AMD09_RS15815 PF07687 Peptidase dimerisation domain AMD09_RS15820 PF04226 AMD09_RS15820 AMD09_RS15825 PF01636 Phosphotransferase enzyme family AMD09_RS15830 PF00483 Nucleotidyl transferase AMD09_RS15835 PF00308 Bacterial dnaA protein AMD09_RS15840 PF01594 AMD09_RS15840 AMD09_RS15845 PF09839 AMD09_RS15845 AMD09_RS15850 PF00586 AIR synthase related protein, N-terminal domain AMD09_RS15850 PF02769 AIR synthase related protein, C-terminal domain AMD09_RS15860 PF00551 Formyl transferase AMD09_RS15865 PF11306 Protein of unknown function (DUF3108) AMD09_RS15870 PF11306 Protein of unknown function (DUF3108) AMD09_RS15880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD09_RS15885 PF01722 BolA-like protein AMD09_RS15890 PF00571 CBS domain AMD09_RS15890 PF01380 SIS domain AMD09_RS15895 PF08282 haloacid dehalogenase-like hydrolase AMD09_RS15900 PF06835 Lipopolysaccharide-assembly, LptC-related AMD09_RS15905 PF03968 OstA-like protein AMD09_RS15910 PF00005 ABC transporter AMD09_RS15910 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD09_RS15915 PF00309 AMD09_RS15915 AMD09_RS15915 PF04552 Sigma-54, DNA binding domain AMD09_RS15915 PF04963 Sigma-54 factor, core binding domain AMD09_RS15920 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD09_RS15925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD09_RS15930 PF02603 HPr Serine kinase N terminus AMD09_RS15930 PF07475 HPr Serine kinase C-terminal domain AMD09_RS15935 PF03668 AMD09_RS15935 AMD09_RS15940 PF03610 PTS system fructose IIA component AMD09_RS15945 PF00381 PTS HPr component phosphorylation site AMD09_RS15950 PF00391 PEP-utilising enzyme, mobile domain AMD09_RS15950 PF02896 PEP-utilising enzyme, TIM barrel domain AMD09_RS15950 PF05524 PEP-utilising enzyme, N-terminal AMD09_RS15955 PF00571 CBS domain AMD09_RS15955 PF01769 Divalent cation transporter AMD09_RS15955 PF03448 MgtE intracellular N domain AMD09_RS15960 PF00326 Prolyl oligopeptidase family AMD09_RS15965 PF02322 AMD09_RS15965 AMD09_RS15970 PF01654 AMD09_RS15970 AMD09_RS15975 PF01244 Membrane dipeptidase (Peptidase family M19) AMD09_RS15980 PF00324 Amino acid permease AMD09_RS15985 PF00544 Pectate lyase AMD09_RS15995 PF00561 alpha/beta hydrolase fold AMD09_RS16005 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS16005 PF03472 Autoinducer binding domain AMD09_RS16010 PF13520 Amino acid permease AMD09_RS16015 PF01764 Lipase (class 3) AMD09_RS16020 PF13365 Trypsin-like peptidase domain AMD09_RS16030 PF12706 Beta-lactamase superfamily domain AMD09_RS16035 PF04820 Tryptophan halogenase AMD09_RS16040 PF13621 Cupin-like domain AMD09_RS16045 PF07277 AMD09_RS16045 AMD09_RS16050 PF00593 TonB dependent receptor AMD09_RS16050 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16060 PF00376 MerR family regulatory protein AMD09_RS16060 PF09278 MerR, DNA binding AMD09_RS16065 PF07690 Major Facilitator Superfamily AMD09_RS16075 PF03738 Glutathionylspermidine synthase preATP-grasp AMD09_RS16080 PF06693 AMD09_RS16080 AMD09_RS16085 PF03994 AMD09_RS16085 AMD09_RS16090 PF10679 AMD09_RS16090 AMD09_RS16095 PF07885 Ion channel AMD09_RS16100 PF04012 AMD09_RS16100 AMD09_RS16105 PF09938 AMD09_RS16105 AMD09_RS16110 PF01243 Pyridoxamine 5'-phosphate oxidase AMD09_RS16110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD09_RS16115 PF01202 Shikimate kinase AMD09_RS16120 PF01761 3-dehydroquinate synthase AMD09_RS16130 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD09_RS16135 PF11747 AMD09_RS16135 AMD09_RS16140 PF11747 AMD09_RS16140 AMD09_RS16145 PF11747 AMD09_RS16145 AMD09_RS16150 PF11747 AMD09_RS16150 AMD09_RS16160 PF11747 AMD09_RS16160 AMD09_RS16165 PF11747 AMD09_RS16165 AMD09_RS16185 PF08924 Domain of unknown function (DUF1906) AMD09_RS16200 PF12833 Helix-turn-helix domain AMD09_RS16200 PF14532 Sigma-54 interaction domain AMD09_RS16205 PF07690 Major Facilitator Superfamily AMD09_RS16210 PF00072 Response regulator receiver domain AMD09_RS16210 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS16210 PF07494 Two component regulator propeller AMD09_RS16210 PF07495 Y_Y_Y domain AMD09_RS16215 PF00072 Response regulator receiver domain AMD09_RS16215 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS16215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS16215 PF07494 Two component regulator propeller AMD09_RS16215 PF07495 Y_Y_Y domain AMD09_RS16225 PF00072 Response regulator receiver domain AMD09_RS16225 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS16225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS16225 PF07494 Two component regulator propeller AMD09_RS16225 PF07495 Y_Y_Y domain AMD09_RS16230 PF04264 YceI-like domain AMD09_RS16235 PF01292 Prokaryotic cytochrome b561 AMD09_RS16240 PF04264 YceI-like domain AMD09_RS16245 PF05768 Glutaredoxin-like domain (DUF836) AMD09_RS16250 PF03313 AMD09_RS16250 AMD09_RS16250 PF03315 Serine dehydratase beta chain AMD09_RS16255 PF00561 alpha/beta hydrolase fold AMD09_RS16260 PF00742 Homoserine dehydrogenase AMD09_RS16260 PF03447 Homoserine dehydrogenase, NAD binding domain AMD09_RS16265 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD09_RS16270 PF00561 alpha/beta hydrolase fold AMD09_RS16275 PF01551 Peptidase family M23 AMD09_RS16280 PF00009 Elongation factor Tu GTP binding domain AMD09_RS16280 PF16658 AMD09_RS16280 AMD09_RS16285 PF03006 AMD09_RS16285 AMD09_RS16290 PF05170 AMD09_RS16290 AMD09_RS16295 PF00571 CBS domain AMD09_RS16300 PF00535 Glycosyl transferase family 2 AMD09_RS16305 PF00912 Transglycosylase AMD09_RS16310 PF01430 Hsp33 protein AMD09_RS16320 PF00593 TonB dependent receptor AMD09_RS16320 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16330 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS16335 PF12146 Putative lysophospholipase AMD09_RS16340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS16340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD09_RS16340 PF09317 AMD09_RS16340 AMD09_RS16345 PF06993 AMD09_RS16345 AMD09_RS16350 PF07690 Major Facilitator Superfamily AMD09_RS16355 PF00144 Beta-lactamase AMD09_RS16365 PF01597 Glycine cleavage H-protein AMD09_RS16370 PF01571 Aminomethyltransferase folate-binding domain AMD09_RS16370 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD09_RS16375 PF01957 NfeD-like C-terminal, partner-binding AMD09_RS16380 PF16200 AMD09_RS16380 AMD09_RS16385 PF02694 AMD09_RS16385 AMD09_RS16390 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD09_RS16395 PF00459 Inositol monophosphatase family AMD09_RS16400 PF00293 NUDIX domain AMD09_RS16405 PF00202 Aminotransferase class-III AMD09_RS16410 PF04452 RNA methyltransferase AMD09_RS16415 PF02685 Glucokinase AMD09_RS16420 PF00593 TonB dependent receptor AMD09_RS16420 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16425 PF01120 Alpha-L-fucosidase AMD09_RS16425 PF16757 AMD09_RS16425 AMD09_RS16430 PF00704 Glycosyl hydrolases family 18 AMD09_RS16435 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD09_RS16435 PF02838 Glycosyl hydrolase family 20, domain 2 AMD09_RS16435 PF13290 AMD09_RS16435 AMD09_RS16440 PF00703 Glycosyl hydrolases family 2 AMD09_RS16445 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD09_RS16445 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD09_RS16445 PF07691 PA14 domain AMD09_RS16445 PF14310 Fibronectin type III-like domain AMD09_RS16450 PF00593 TonB dependent receptor AMD09_RS16450 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16450 PF13620 Carboxypeptidase regulatory-like domain AMD09_RS16455 PF01301 Glycosyl hydrolases family 35 AMD09_RS16460 PF13520 Amino acid permease AMD09_RS16465 PF00294 pfkB family carbohydrate kinase AMD09_RS16470 PF02056 Family 4 glycosyl hydrolase AMD09_RS16470 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD09_RS16475 PF06824 Protein of unknown function (DUF1237) AMD09_RS16480 PF07971 Glycosyl hydrolase family 92 AMD09_RS16485 PF01301 Glycosyl hydrolases family 35 AMD09_RS16500 PF11747 AMD09_RS16500 AMD09_RS16505 PF13088 BNR repeat-like domain AMD09_RS16510 PF13855 Leucine rich repeat AMD09_RS16515 PF03932 CutC family AMD09_RS16520 PF01112 Asparaginase AMD09_RS16530 PF13302 Acetyltransferase (GNAT) domain AMD09_RS16535 PF01584 CheW-like domain AMD09_RS16540 PF01339 CheB methylesterase AMD09_RS16545 PF00072 Response regulator receiver domain AMD09_RS16545 PF01584 CheW-like domain AMD09_RS16545 PF01627 Hpt domain AMD09_RS16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS16545 PF02895 Signal transducing histidine kinase, homodimeric domain AMD09_RS16550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS16555 PF01584 CheW-like domain AMD09_RS16560 PF00072 Response regulator receiver domain AMD09_RS16565 PF00072 Response regulator receiver domain AMD09_RS16570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD09_RS16570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD09_RS16575 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS16580 PF03747 ADP-ribosylglycohydrolase AMD09_RS16585 PF00814 Glycoprotease family AMD09_RS16590 PF00270 DEAD/DEAH box helicase AMD09_RS16590 PF13307 Helicase C-terminal domain AMD09_RS16600 PF00905 Penicillin binding protein transpeptidase domain AMD09_RS16600 PF00912 Transglycosylase AMD09_RS16600 PF14814 Bifunctional transglycosylase second domain AMD09_RS16605 PF00535 Glycosyl transferase family 2 AMD09_RS16605 PF13692 Glycosyl transferases group 1 AMD09_RS16615 PF02824 TGS domain AMD09_RS16615 PF04607 Region found in RelA / SpoT proteins AMD09_RS16615 PF13291 ACT domain AMD09_RS16615 PF13328 HD domain AMD09_RS16620 PF12706 Beta-lactamase superfamily domain AMD09_RS16625 PF03070 TENA/THI-4/PQQC family AMD09_RS16630 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD09_RS16635 PF04055 Radical SAM superfamily AMD09_RS16635 PF13186 Iron-sulfur cluster-binding domain AMD09_RS16635 PF13353 4Fe-4S single cluster domain AMD09_RS16645 PF10142 PhoPQ-activated pathogenicity-related protein AMD09_RS16650 PF02685 Glucokinase AMD09_RS16655 PF00593 TonB dependent receptor AMD09_RS16655 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16660 PF00270 DEAD/DEAH box helicase AMD09_RS16660 PF00271 Helicase conserved C-terminal domain AMD09_RS16660 PF04408 Helicase associated domain (HA2) AMD09_RS16660 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD09_RS16660 PF11898 AMD09_RS16660 AMD09_RS16665 PF00210 Ferritin-like domain AMD09_RS16670 PF00270 DEAD/DEAH box helicase AMD09_RS16670 PF00271 Helicase conserved C-terminal domain AMD09_RS16670 PF00570 HRDC domain AMD09_RS16670 PF09382 RQC domain AMD09_RS16670 PF16124 AMD09_RS16670 AMD09_RS16680 PF00072 Response regulator receiver domain AMD09_RS16690 PF01479 S4 domain AMD09_RS16705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS16705 PF00672 HAMP domain AMD09_RS16705 PF12729 AMD09_RS16705 AMD09_RS16710 PF01810 AMD09_RS16710 AMD09_RS16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS16715 PF03466 LysR substrate binding domain AMD09_RS16720 PF00072 Response regulator receiver domain AMD09_RS16725 PF07536 AMD09_RS16725 AMD09_RS16725 PF08448 PAS fold AMD09_RS16730 PF06508 Queuosine biosynthesis protein QueC AMD09_RS16740 PF04055 Radical SAM superfamily AMD09_RS16740 PF13394 4Fe-4S single cluster domain AMD09_RS16745 PF13525 Outer membrane lipoprotein AMD09_RS16745 PF16331 AMD09_RS16745 AMD09_RS16750 PF00691 OmpA family AMD09_RS16755 PF04052 TolB amino-terminal domain AMD09_RS16755 PF07676 WD40-like Beta Propeller Repeat AMD09_RS16760 PF13103 TonB C terminal AMD09_RS16765 PF02472 Biopolymer transport protein ExbD/TolR AMD09_RS16770 PF01618 AMD09_RS16770 AMD09_RS16775 PF03061 Thioesterase superfamily AMD09_RS16780 PF05491 Holliday junction DNA helicase ruvB C-terminus AMD09_RS16780 PF05496 Holliday junction DNA helicase ruvB N-terminus AMD09_RS16790 PF02705 AMD09_RS16790 AMD09_RS16795 PF01330 RuvA N terminal domain AMD09_RS16795 PF07499 RuvA, C-terminal domain AMD09_RS16795 PF14520 Helix-hairpin-helix domain AMD09_RS16800 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD09_RS16805 PF01709 Transcriptional regulator AMD09_RS16810 PF12697 Alpha/beta hydrolase family AMD09_RS16815 PF13673 Acetyltransferase (GNAT) domain AMD09_RS16820 PF00152 tRNA synthetases class II (D, K and N) AMD09_RS16820 PF01336 OB-fold nucleic acid binding domain AMD09_RS16820 PF02938 GAD domain AMD09_RS16825 PF11218 AMD09_RS16825 AMD09_RS16830 PF09723 AMD09_RS16830 AMD09_RS16835 PF07690 Major Facilitator Superfamily AMD09_RS16840 PF00593 TonB dependent receptor AMD09_RS16840 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16855 PF13354 Beta-lactamase enzyme family AMD09_RS16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS16860 PF03466 LysR substrate binding domain AMD09_RS16865 PF14317 AMD09_RS16865 AMD09_RS16870 PF00005 ABC transporter AMD09_RS16870 PF12848 ABC transporter AMD09_RS16870 PF16326 AMD09_RS16870 AMD09_RS16875 PF00593 TonB dependent receptor AMD09_RS16875 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS16890 PF00593 TonB dependent receptor AMD09_RS16890 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16895 PF00593 TonB dependent receptor AMD09_RS16895 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16900 PF00067 Cytochrome P450 AMD09_RS16905 PF00999 Sodium/hydrogen exchanger family AMD09_RS16905 PF02254 TrkA-N domain AMD09_RS16925 PF03328 HpcH/HpaI aldolase/citrate lyase family AMD09_RS16930 PF00593 TonB dependent receptor AMD09_RS16930 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS16935 PF02655 ATP-grasp domain AMD09_RS16940 PF04183 IucA / IucC family AMD09_RS16940 PF06276 Ferric iron reductase FhuF-like transporter AMD09_RS16945 PF07690 Major Facilitator Superfamily AMD09_RS16950 PF04183 IucA / IucC family AMD09_RS16950 PF06276 Ferric iron reductase FhuF-like transporter AMD09_RS16955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD09_RS16955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD09_RS16970 PF02654 AMD09_RS16970 AMD09_RS16975 PF00300 Histidine phosphatase superfamily (branch 1) AMD09_RS16980 PF02277 Phosphoribosyltransferase AMD09_RS16985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD09_RS16990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD09_RS16990 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD09_RS16995 PF00155 Aminotransferase class I and II AMD09_RS17000 PF03186 AMD09_RS17000 AMD09_RS17005 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD09_RS17005 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD09_RS17020 PF00593 TonB dependent receptor AMD09_RS17020 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS17025 PF00004 ATPase family associated with various cellular activities (AAA) AMD09_RS17025 PF02861 Clp amino terminal domain AMD09_RS17025 PF07724 AAA domain (Cdc48 subfamily) AMD09_RS17025 PF10431 C-terminal, D2-small domain, of ClpB protein AMD09_RS17030 PF00005 ABC transporter AMD09_RS17035 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS17040 PF09084 NMT1/THI5 like AMD09_RS17045 PF00248 Aldo/keto reductase family AMD09_RS17050 PF00296 Luciferase-like monooxygenase AMD09_RS17055 PF00593 TonB dependent receptor AMD09_RS17055 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS17060 PF01541 GIY-YIG catalytic domain AMD09_RS17065 PF14497 Glutathione S-transferase, C-terminal domain AMD09_RS17070 PF11219 AMD09_RS17070 AMD09_RS17075 PF07007 Protein of unknown function (DUF1311) AMD09_RS17090 PF12098 AMD09_RS17090 AMD09_RS17095 PF00593 TonB dependent receptor AMD09_RS17095 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS17100 PF02358 Trehalose-phosphatase AMD09_RS17105 PF00723 Glycosyl hydrolases family 15 AMD09_RS17110 PF00982 Glycosyltransferase family 20 AMD09_RS17115 PF01011 PQQ enzyme repeat AMD09_RS17115 PF13360 PQQ-like domain AMD09_RS17120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS17125 PF04134 AMD09_RS17125 AMD09_RS17130 PF13761 AMD09_RS17130 AMD09_RS17135 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD09_RS17140 PF00849 RNA pseudouridylate synthase AMD09_RS17145 PF13525 Outer membrane lipoprotein AMD09_RS17155 PF00795 Carbon-nitrogen hydrolase AMD09_RS17155 PF02540 NAD synthase AMD09_RS17160 PF04480 Protein of unknown function (DUF559) AMD09_RS17165 PF01527 Transposase AMD09_RS17175 PF13333 AMD09_RS17175 AMD09_RS17185 PF01471 Putative peptidoglycan binding domain AMD09_RS17185 PF13406 Transglycosylase SLT domain AMD09_RS17190 PF01526 AMD09_RS17190 AMD09_RS17190 PF13700 AMD09_RS17190 AMD09_RS17230 PF01695 IstB-like ATP binding protein AMD09_RS17250 PF01527 Transposase AMD09_RS17255 PF00665 Integrase core domain AMD09_RS17255 PF13276 AMD09_RS17255 AMD09_RS17280 PF12811 AMD09_RS17280 AMD09_RS17285 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD09_RS17290 PF02627 Carboxymuconolactone decarboxylase family AMD09_RS17295 PF00462 Glutaredoxin AMD09_RS17300 PF01435 Peptidase family M48 AMD09_RS17305 PF00072 Response regulator receiver domain AMD09_RS17305 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS17310 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS17310 PF11808 AMD09_RS17310 AMD09_RS17315 PF02503 Polyphosphate kinase middle domain AMD09_RS17315 PF13089 Polyphosphate kinase N-terminal domain AMD09_RS17315 PF13090 Polyphosphate kinase C-terminal domain AMD09_RS17320 PF02541 Ppx/GppA phosphatase family AMD09_RS17325 PF00534 Glycosyl transferases group 1 AMD09_RS17325 PF13439 Glycosyltransferase Family 4 AMD09_RS17330 PF01569 PAP2 superfamily AMD09_RS17335 PF00149 Calcineurin-like phosphoesterase AMD09_RS17345 PF13688 Metallo-peptidase family M12 AMD09_RS17360 PF13522 Glutamine amidotransferase domain AMD09_RS17365 PF02674 AMD09_RS17365 AMD09_RS17370 PF05036 Sporulation related domain AMD09_RS17375 PF08245 Mur ligase middle domain AMD09_RS17380 PF00300 Histidine phosphatase superfamily (branch 1) AMD09_RS17385 PF10459 Peptidase S46 AMD09_RS17390 PF10459 Peptidase S46 AMD09_RS17395 PF04185 Phosphoesterase family AMD09_RS17395 PF05506 AMD09_RS17395 AMD09_RS17400 PF00593 TonB dependent receptor AMD09_RS17400 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS17405 PF00107 Zinc-binding dehydrogenase AMD09_RS17405 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS17410 PF09694 AMD09_RS17410 AMD09_RS17415 PF00005 ABC transporter AMD09_RS17415 PF12857 AMD09_RS17415 AMD09_RS17420 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS17425 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS17430 PF13531 Bacterial extracellular solute-binding protein AMD09_RS17435 PF00155 Aminotransferase class I and II AMD09_RS17445 PF00849 RNA pseudouridylate synthase AMD09_RS17445 PF01479 S4 domain AMD09_RS17455 PF00691 OmpA family AMD09_RS17455 PF13505 Outer membrane protein beta-barrel domain AMD09_RS17465 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS17465 PF13602 Zinc-binding dehydrogenase AMD09_RS17470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD09_RS17470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS17475 PF07486 Cell Wall Hydrolase AMD09_RS17480 PF00043 Glutathione S-transferase, C-terminal domain AMD09_RS17480 PF02798 Glutathione S-transferase, N-terminal domain AMD09_RS17485 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD09_RS17485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD09_RS17490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD09_RS17495 PF00009 Elongation factor Tu GTP binding domain AMD09_RS17495 PF00679 Elongation factor G C-terminus AMD09_RS17495 PF03144 Elongation factor Tu domain 2 AMD09_RS17500 PF09900 AMD09_RS17500 AMD09_RS17505 PF01425 Amidase AMD09_RS17510 PF00924 Mechanosensitive ion channel AMD09_RS17515 PF01474 Class-II DAHP synthetase family AMD09_RS17520 PF00593 TonB dependent receptor AMD09_RS17520 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS17530 PF02600 Disulfide bond formation protein DsbB AMD09_RS17535 PF01196 Ribosomal protein L17 AMD09_RS17540 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD09_RS17540 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD09_RS17540 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD09_RS17545 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD09_RS17545 PF01479 S4 domain AMD09_RS17550 PF00411 Ribosomal protein S11 AMD09_RS17555 PF00416 Ribosomal protein S13/S18 AMD09_RS17560 PF00344 SecY translocase AMD09_RS17565 PF00828 Ribosomal protein L18e/L15 AMD09_RS17570 PF00327 Ribosomal protein L30p/L7e AMD09_RS17575 PF00333 Ribosomal protein S5, N-terminal domain AMD09_RS17575 PF03719 Ribosomal protein S5, C-terminal domain AMD09_RS17580 PF00861 Ribosomal L18p/L5e family AMD09_RS17585 PF00347 Ribosomal protein L6 AMD09_RS17590 PF00410 Ribosomal protein S8 AMD09_RS17595 PF00253 Ribosomal protein S14p/S29e AMD09_RS17600 PF00281 Ribosomal protein L5 AMD09_RS17600 PF00673 ribosomal L5P family C-terminus AMD09_RS17605 PF00467 KOW motif AMD09_RS17605 PF17136 AMD09_RS17605 AMD09_RS17610 PF00238 Ribosomal protein L14p/L23e AMD09_RS17615 PF00366 Ribosomal protein S17 AMD09_RS17620 PF00831 Ribosomal L29 protein AMD09_RS17625 PF00252 Ribosomal protein L16p/L10e AMD09_RS17630 PF00189 Ribosomal protein S3, C-terminal domain AMD09_RS17630 PF07650 KH domain AMD09_RS17635 PF00237 Ribosomal protein L22p/L17e AMD09_RS17640 PF00203 Ribosomal protein S19 AMD09_RS17645 PF00181 Ribosomal Proteins L2, RNA binding domain AMD09_RS17645 PF03947 Ribosomal Proteins L2, C-terminal domain AMD09_RS17650 PF00276 Ribosomal protein L23 AMD09_RS17655 PF00573 Ribosomal protein L4/L1 family AMD09_RS17660 PF00297 Ribosomal protein L3 AMD09_RS17665 PF00338 Ribosomal protein S10p/S20e AMD09_RS17670 PF00009 Elongation factor Tu GTP binding domain AMD09_RS17670 PF03143 Elongation factor Tu C-terminal domain AMD09_RS17670 PF03144 Elongation factor Tu domain 2 AMD09_RS17675 PF00009 Elongation factor Tu GTP binding domain AMD09_RS17675 PF00679 Elongation factor G C-terminus AMD09_RS17675 PF03144 Elongation factor Tu domain 2 AMD09_RS17675 PF03764 Elongation factor G, domain IV AMD09_RS17675 PF14492 Elongation Factor G, domain II AMD09_RS17680 PF00177 Ribosomal protein S7p/S5e AMD09_RS17685 PF00164 Ribosomal protein S12/S23 AMD09_RS17690 PF00623 RNA polymerase Rpb1, domain 2 AMD09_RS17690 PF04983 RNA polymerase Rpb1, domain 3 AMD09_RS17690 PF04997 RNA polymerase Rpb1, domain 1 AMD09_RS17690 PF04998 RNA polymerase Rpb1, domain 5 AMD09_RS17690 PF05000 RNA polymerase Rpb1, domain 4 AMD09_RS17695 PF00562 RNA polymerase Rpb2, domain 6 AMD09_RS17695 PF04560 RNA polymerase Rpb2, domain 7 AMD09_RS17695 PF04561 RNA polymerase Rpb2, domain 2 AMD09_RS17695 PF04563 RNA polymerase beta subunit AMD09_RS17695 PF04565 RNA polymerase Rpb2, domain 3 AMD09_RS17695 PF10385 RNA polymerase beta subunit external 1 domain AMD09_RS17700 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD09_RS17700 PF16320 AMD09_RS17700 AMD09_RS17705 PF00466 Ribosomal protein L10 AMD09_RS17710 PF00687 Ribosomal protein L1p/L10e family AMD09_RS17715 PF00298 Ribosomal protein L11, RNA binding domain AMD09_RS17715 PF03946 Ribosomal protein L11, N-terminal domain AMD09_RS17720 PF00467 KOW motif AMD09_RS17720 PF02357 Transcription termination factor nusG AMD09_RS17725 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD09_RS17735 PF00009 Elongation factor Tu GTP binding domain AMD09_RS17735 PF03143 Elongation factor Tu C-terminal domain AMD09_RS17735 PF03144 Elongation factor Tu domain 2 AMD09_RS17755 PF01926 50S ribosome-binding GTPase AMD09_RS17755 PF06071 Protein of unknown function (DUF933) AMD09_RS17760 PF01195 Peptidyl-tRNA hydrolase AMD09_RS17765 PF01386 Ribosomal L25p family AMD09_RS17765 PF14693 Ribosomal protein TL5, C-terminal domain AMD09_RS17770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD09_RS17770 PF14572 Phosphoribosyl synthetase-associated domain AMD09_RS17780 PF00288 GHMP kinases N terminal domain AMD09_RS17780 PF08544 GHMP kinases C terminal AMD09_RS17785 PF03550 Outer membrane lipoprotein LolB AMD09_RS17790 PF13429 Tetratricopeptide repeat AMD09_RS17795 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD09_RS17795 PF01488 Shikimate / quinate 5-dehydrogenase AMD09_RS17795 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD09_RS17800 PF00472 RF-1 domain AMD09_RS17800 PF03462 PCRF domain AMD09_RS17805 PF13844 Glycosyl transferase family 41 AMD09_RS17805 PF14559 Tetratricopeptide repeat AMD09_RS17810 PF00994 Probable molybdopterin binding domain AMD09_RS17815 PF03976 Polyphosphate kinase 2 (PPK2) AMD09_RS17825 PF00708 Acylphosphatase AMD09_RS17830 PF00578 AhpC/TSA family AMD09_RS17835 PF03631 AMD09_RS17835 AMD09_RS17840 PF03358 NADPH-dependent FMN reductase AMD09_RS17845 PF09842 AMD09_RS17845 AMD09_RS17855 PF00710 Asparaginase AMD09_RS17860 PF04073 Aminoacyl-tRNA editing domain AMD09_RS17865 PF00082 Subtilase family AMD09_RS17865 PF04151 Bacterial pre-peptidase C-terminal domain AMD09_RS17870 PF00082 Subtilase family AMD09_RS17875 PF00082 Subtilase family AMD09_RS17875 PF04151 Bacterial pre-peptidase C-terminal domain AMD09_RS17880 PF01063 Aminotransferase class IV AMD09_RS17885 PF01883 Domain of unknown function DUF59 AMD09_RS17895 PF02233 NAD(P) transhydrogenase beta subunit AMD09_RS17900 PF12769 Domain of unknown function (DUF3814) AMD09_RS17905 PF04542 Sigma-70 region 2 AMD09_RS17905 PF08281 Sigma-70, region 4 AMD09_RS17915 PF11304 AMD09_RS17915 AMD09_RS17920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD09_RS17920 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD09_RS17925 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS17925 PF13305 WHG domain AMD09_RS17930 PF12146 Putative lysophospholipase AMD09_RS17935 PF07793 AMD09_RS17935 AMD09_RS17940 PF07793 AMD09_RS17940 AMD09_RS17945 PF00881 Nitroreductase family AMD09_RS17950 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD09_RS17950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD09_RS17955 PF00293 NUDIX domain AMD09_RS17960 PF05013 N-formylglutamate amidohydrolase AMD09_RS17965 PF00561 alpha/beta hydrolase fold AMD09_RS17970 PF05175 Methyltransferase small domain AMD09_RS17975 PF00578 AhpC/TSA family AMD09_RS17975 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD09_RS17980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS17980 PF13192 Thioredoxin domain AMD09_RS17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS17985 PF03466 LysR substrate binding domain AMD09_RS17990 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD09_RS17990 PF14760 Rnk N-terminus AMD09_RS17995 PF00923 Transaldolase AMD09_RS18000 PF01965 DJ-1/PfpI family AMD09_RS18005 PF01625 Peptide methionine sulfoxide reductase AMD09_RS18010 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD09_RS18015 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS18020 PF00072 Response regulator receiver domain AMD09_RS18020 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS18020 PF00672 HAMP domain AMD09_RS18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS18020 PF05227 CHASE3 domain AMD09_RS18025 PF00072 Response regulator receiver domain AMD09_RS18030 PF09413 Domain of unknown function (DUF2007) AMD09_RS18035 PF13409 Glutathione S-transferase, N-terminal domain AMD09_RS18040 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD09_RS18040 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD09_RS18070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD09_RS18075 PF01728 FtsJ-like methyltransferase AMD09_RS18080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD09_RS18085 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD09_RS18095 PF13202 EF hand AMD09_RS18100 PF12802 MarR family AMD09_RS18105 PF00378 Enoyl-CoA hydratase/isomerase family AMD09_RS18110 PF00171 Aldehyde dehydrogenase family AMD09_RS18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS18120 PF03466 LysR substrate binding domain AMD09_RS18125 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD09_RS18130 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD09_RS18135 PF00392 Bacterial regulatory proteins, gntR family AMD09_RS18135 PF07729 FCD domain AMD09_RS18140 PF13557 AMD09_RS18140 AMD09_RS18145 PF13577 SnoaL-like domain AMD09_RS18150 PF12697 Alpha/beta hydrolase family AMD09_RS18155 PF01494 FAD binding domain AMD09_RS18160 PF01494 FAD binding domain AMD09_RS18170 PF01923 Cobalamin adenosyltransferase AMD09_RS18175 PF00850 Histone deacetylase domain AMD09_RS18180 PF00850 Histone deacetylase domain AMD09_RS18185 PF03968 OstA-like protein AMD09_RS18185 PF04453 Organic solvent tolerance protein AMD09_RS18190 PF00639 PPIC-type PPIASE domain AMD09_RS18190 PF09312 SurA N-terminal domain AMD09_RS18190 PF13616 PPIC-type PPIASE domain AMD09_RS18195 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD09_RS18200 PF00398 Ribosomal RNA adenine dimethylase AMD09_RS18205 PF04379 Protein of unknown function (DUF525) AMD09_RS18210 PF00149 Calcineurin-like phosphoesterase AMD09_RS18215 PF00005 ABC transporter AMD09_RS18215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD09_RS18220 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS18225 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS18230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD09_RS18235 PF00296 Luciferase-like monooxygenase AMD09_RS18240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS18250 PF00593 TonB dependent receptor AMD09_RS18250 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS18255 PF03358 NADPH-dependent FMN reductase AMD09_RS18260 PF00296 Luciferase-like monooxygenase AMD09_RS18265 PF09084 NMT1/THI5 like AMD09_RS18270 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS18275 PF00005 ABC transporter AMD09_RS18280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD09_RS18280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD09_RS18285 PF00158 Sigma-54 interaction domain AMD09_RS18290 PF00186 Dihydrofolate reductase AMD09_RS18300 PF00303 Thymidylate synthase AMD09_RS18305 PF01790 AMD09_RS18305 AMD09_RS18310 PF04536 TLP18 AMD09_RS18315 PF04536 TLP18 AMD09_RS18320 PF04011 LemA family AMD09_RS18325 PF01219 Prokaryotic diacylglycerol kinase AMD09_RS18330 PF13472 GDSL-like Lipase/Acylhydrolase family AMD09_RS18335 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS18340 PF00072 Response regulator receiver domain AMD09_RS18340 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS18345 PF13472 GDSL-like Lipase/Acylhydrolase family AMD09_RS18350 PF00005 ABC transporter AMD09_RS18355 PF02687 AMD09_RS18355 AMD09_RS18360 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD09_RS18365 PF13379 NMT1-like family AMD09_RS18370 PF00005 ABC transporter AMD09_RS18375 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS18380 PF04342 AMD09_RS18380 AMD09_RS18395 PF00593 TonB dependent receptor AMD09_RS18395 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS18400 PF10636 Hemin uptake protein hemP AMD09_RS18405 PF00248 Aldo/keto reductase family AMD09_RS18410 PF01773 Na+ dependent nucleoside transporter N-terminus AMD09_RS18410 PF07662 Na+ dependent nucleoside transporter C-terminus AMD09_RS18410 PF07670 Nucleoside recognition AMD09_RS18415 PF00294 pfkB family carbohydrate kinase AMD09_RS18420 PF08306 Glycosyl hydrolase family 98 AMD09_RS18420 PF08307 Glycosyl hydrolase family 98 C-terminal domain AMD09_RS18420 PF16990 AMD09_RS18420 AMD09_RS18425 PF01207 Dihydrouridine synthase (Dus) AMD09_RS18430 PF08241 Methyltransferase domain AMD09_RS18435 PF04307 AMD09_RS18435 AMD09_RS18440 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD09_RS18440 PF02772 S-adenosylmethionine synthetase, central domain AMD09_RS18440 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD09_RS18445 PF00328 Histidine phosphatase superfamily (branch 2) AMD09_RS18450 PF00593 TonB dependent receptor AMD09_RS18450 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS18465 PF13387 AMD09_RS18465 AMD09_RS18470 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS18475 PF00311 Phosphoenolpyruvate carboxylase AMD09_RS18480 PF00326 Prolyl oligopeptidase family AMD09_RS18485 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD09_RS18485 PF05221 S-adenosyl-L-homocysteine hydrolase AMD09_RS18490 PF13649 Methyltransferase domain AMD09_RS18495 PF00685 Sulfotransferase domain AMD09_RS18505 PF11539 Protein of unknown function (DUF3228) AMD09_RS18510 PF09831 AMD09_RS18510 AMD09_RS18520 PF00128 Alpha amylase, catalytic domain AMD09_RS18525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD09_RS18535 PF00082 Subtilase family AMD09_RS18535 PF09286 Pro-kumamolisin, activation domain AMD09_RS18540 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS18540 PF13602 Zinc-binding dehydrogenase AMD09_RS18545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD09_RS18560 PF00293 NUDIX domain AMD09_RS18560 PF02581 Thiamine monophosphate synthase/TENI AMD09_RS18565 PF01043 SecA preprotein cross-linking domain AMD09_RS18565 PF02810 SEC-C motif AMD09_RS18565 PF07516 SecA Wing and Scaffold domain AMD09_RS18565 PF07517 SecA DEAD-like domain AMD09_RS18570 PF01551 Peptidase family M23 AMD09_RS18575 PF05258 AMD09_RS18575 AMD09_RS18580 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD09_RS18585 PF00091 Tubulin/FtsZ family, GTPase domain AMD09_RS18585 PF12327 FtsZ family, C-terminal domain AMD09_RS18590 PF02491 SHS2 domain inserted in FTSA AMD09_RS18590 PF14450 Cell division protein FtsA AMD09_RS18595 PF03799 Cell division protein FtsQ AMD09_RS18595 PF08478 POTRA domain, FtsQ-type AMD09_RS18600 PF01820 D-ala D-ala ligase N-terminus AMD09_RS18600 PF07478 D-ala D-ala ligase C-terminus AMD09_RS18605 PF01225 Mur ligase family, catalytic domain AMD09_RS18605 PF02875 Mur ligase family, glutamate ligase domain AMD09_RS18605 PF08245 Mur ligase middle domain AMD09_RS18610 PF03033 Glycosyltransferase family 28 N-terminal domain AMD09_RS18610 PF04101 Glycosyltransferase family 28 C-terminal domain AMD09_RS18615 PF03033 Glycosyltransferase family 28 N-terminal domain AMD09_RS18615 PF04101 Glycosyltransferase family 28 C-terminal domain AMD09_RS18620 PF01098 AMD09_RS18620 AMD09_RS18625 PF00953 Glycosyl transferase family 4 AMD09_RS18630 PF01225 Mur ligase family, catalytic domain AMD09_RS18630 PF02875 Mur ligase family, glutamate ligase domain AMD09_RS18630 PF08245 Mur ligase middle domain AMD09_RS18635 PF01225 Mur ligase family, catalytic domain AMD09_RS18635 PF02875 Mur ligase family, glutamate ligase domain AMD09_RS18635 PF08245 Mur ligase middle domain AMD09_RS18640 PF00905 Penicillin binding protein transpeptidase domain AMD09_RS18640 PF03717 Penicillin-binding Protein dimerisation domain AMD09_RS18645 PF04999 AMD09_RS18645 AMD09_RS18650 PF01795 MraW methylase family AMD09_RS18655 PF02381 MraZ protein AMD09_RS18660 PF05742 AMD09_RS18660 AMD09_RS18665 PF07362 Post-segregation antitoxin CcdA AMD09_RS18670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD09_RS18675 PF04348 LppC putative lipoprotein AMD09_RS18680 PF02021 Uncharacterised protein family UPF0102 AMD09_RS18685 PF04307 AMD09_RS18685 AMD09_RS18690 PF01565 FAD binding domain AMD09_RS18690 PF02913 FAD linked oxidases, C-terminal domain AMD09_RS18695 PF07007 Protein of unknown function (DUF1311) AMD09_RS18705 PF00072 Response regulator receiver domain AMD09_RS18705 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS18710 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS18710 PF00582 Universal stress protein family AMD09_RS18710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS18710 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD09_RS18710 PF13493 Domain of unknown function (DUF4118) AMD09_RS18715 PF02669 AMD09_RS18715 AMD09_RS18720 PF00122 E1-E2 ATPase AMD09_RS18720 PF00702 haloacid dehalogenase-like hydrolase AMD09_RS18725 PF03814 AMD09_RS18725 AMD09_RS18730 PF09604 AMD09_RS18730 AMD09_RS18735 PF00646 F-box domain AMD09_RS18740 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD09_RS18740 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD09_RS18745 PF00586 AIR synthase related protein, N-terminal domain AMD09_RS18745 PF02769 AIR synthase related protein, C-terminal domain AMD09_RS18750 PF01029 NusB family AMD09_RS18755 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD09_RS18760 PF00925 GTP cyclohydrolase II AMD09_RS18760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD09_RS18765 PF00677 Lumazine binding domain AMD09_RS18775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD09_RS18775 PF01872 RibD C-terminal domain AMD09_RS18780 PF00583 Acetyltransferase (GNAT) family AMD09_RS18785 PF03477 ATP cone domain AMD09_RS18790 PF00464 Serine hydroxymethyltransferase AMD09_RS18795 PF11776 Domain of unknown function (DUF3315) AMD09_RS18800 PF00005 ABC transporter AMD09_RS18800 PF12848 ABC transporter AMD09_RS18810 PF00892 EamA-like transporter family AMD09_RS18815 PF02567 Phenazine biosynthesis-like protein AMD09_RS18820 PF00155 Aminotransferase class I and II AMD09_RS18820 PF00392 Bacterial regulatory proteins, gntR family AMD09_RS18830 PF00756 Putative esterase AMD09_RS18835 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD09_RS18840 PF00107 Zinc-binding dehydrogenase AMD09_RS18840 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS18845 PF02583 Metal-sensitive transcriptional repressor AMD09_RS18855 PF00534 Glycosyl transferases group 1 AMD09_RS18860 PF00072 Response regulator receiver domain AMD09_RS18860 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS18865 PF00672 HAMP domain AMD09_RS18865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS18870 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD09_RS18875 PF12833 Helix-turn-helix domain AMD09_RS18880 PF00753 Metallo-beta-lactamase superfamily AMD09_RS18885 PF01926 50S ribosome-binding GTPase AMD09_RS18890 PF00034 Cytochrome c AMD09_RS18895 PF13462 Thioredoxin AMD09_RS18900 PF01323 DSBA-like thioredoxin domain AMD09_RS18905 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS18910 PF02028 BCCT family transporter AMD09_RS18915 PF00171 Aldehyde dehydrogenase family AMD09_RS18920 PF00732 GMC oxidoreductase AMD09_RS18920 PF05199 GMC oxidoreductase AMD09_RS18925 PF01743 Poly A polymerase head domain AMD09_RS18925 PF01966 HD domain AMD09_RS18925 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD09_RS18930 PF00593 TonB dependent receptor AMD09_RS18930 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS18935 PF01979 Amidohydrolase family AMD09_RS18940 PF01380 SIS domain AMD09_RS18945 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS18945 PF13377 Periplasmic binding protein-like domain AMD09_RS18950 PF07690 Major Facilitator Superfamily AMD09_RS18955 PF00392 Bacterial regulatory proteins, gntR family AMD09_RS18955 PF07702 UTRA domain AMD09_RS18960 PF07786 AMD09_RS18960 AMD09_RS18965 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain AMD09_RS18965 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain AMD09_RS18965 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain AMD09_RS18970 PF00703 Glycosyl hydrolases family 2 AMD09_RS18970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD09_RS18970 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD09_RS18970 PF16355 AMD09_RS18970 AMD09_RS18975 PF00593 TonB dependent receptor AMD09_RS18975 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS18980 PF01203 AMD09_RS18980 AMD09_RS18985 PF04612 Type II secretion system (T2SS), protein M AMD09_RS18990 PF05134 Type II secretion system (T2SS), protein L AMD09_RS18990 PF12693 GspL periplasmic domain AMD09_RS18995 PF03934 Type II secretion system (T2SS), protein K AMD09_RS19000 PF11612 Type II secretion system (T2SS), protein J AMD09_RS19000 PF13544 AMD09_RS19000 AMD09_RS19005 PF02501 Type II secretion system (T2SS), protein I AMD09_RS19005 PF13633 Prokaryotic N-terminal methylation site AMD09_RS19010 PF12019 Type II transport protein GspH AMD09_RS19015 PF08334 Type II secretion system (T2SS), protein G AMD09_RS19015 PF13544 AMD09_RS19015 AMD09_RS19020 PF00482 Type II secretion system (T2SS), protein F AMD09_RS19025 PF00437 Type II/IV secretion system protein AMD09_RS19030 PF00263 AMD09_RS19030 AMD09_RS19030 PF03958 Bacterial type II/III secretion system short domain AMD09_RS19035 PF11356 Type IV pilus biogenesis AMD09_RS19035 PF13180 PDZ domain AMD09_RS19040 PF00593 TonB dependent receptor AMD09_RS19040 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS19050 PF13640 2OG-Fe(II) oxygenase superfamily AMD09_RS19055 PF00593 TonB dependent receptor AMD09_RS19055 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS19060 PF04892 AMD09_RS19060 AMD09_RS19065 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AMD09_RS19070 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS19075 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD09_RS19080 PF00072 Response regulator receiver domain AMD09_RS19080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS19085 PF00072 Response regulator receiver domain AMD09_RS19090 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS19090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS19090 PF05227 CHASE3 domain AMD09_RS19090 PF13188 PAS domain AMD09_RS19095 PF04972 BON domain AMD09_RS19100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD09_RS19100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD09_RS19105 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD09_RS19105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD09_RS19115 PF05433 AMD09_RS19115 AMD09_RS19120 PF10001 AMD09_RS19120 AMD09_RS19125 PF01555 DNA methylase AMD09_RS19135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD09_RS19140 PF00293 NUDIX domain AMD09_RS19140 PF01467 Cytidylyltransferase AMD09_RS19145 PF03372 Endonuclease/Exonuclease/phosphatase family AMD09_RS19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS19150 PF03466 LysR substrate binding domain AMD09_RS19155 PF01925 AMD09_RS19155 AMD09_RS19160 PF00595 PDZ domain (Also known as DHR or GLGF) AMD09_RS19160 PF03572 Peptidase family S41 AMD09_RS19160 PF11818 AMD09_RS19160 AMD09_RS19165 PF04055 Radical SAM superfamily AMD09_RS19165 PF16881 AMD09_RS19165 AMD09_RS19170 PF03099 Biotin/lipoate A/B protein ligase family AMD09_RS19175 PF04359 Protein of unknown function (DUF493) AMD09_RS19180 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) AMD09_RS19185 PF00768 D-alanyl-D-alanine carboxypeptidase AMD09_RS19185 PF07943 Penicillin-binding protein 5, C-terminal domain AMD09_RS19195 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AMD09_RS19195 PF05036 Sporulation related domain AMD09_RS19200 PF13406 Transglycosylase SLT domain AMD09_RS19205 PF00295 Glycosyl hydrolases family 28 AMD09_RS19210 PF01098 AMD09_RS19210 AMD09_RS19215 PF00905 Penicillin binding protein transpeptidase domain AMD09_RS19215 PF03717 Penicillin-binding Protein dimerisation domain AMD09_RS19220 PF04093 AMD09_RS19220 AMD09_RS19225 PF04085 rod shape-determining protein MreC AMD09_RS19230 PF06723 MreB/Mbl protein AMD09_RS19235 PF00294 pfkB family carbohydrate kinase AMD09_RS19240 PF00158 Sigma-54 interaction domain AMD09_RS19240 PF02954 Bacterial regulatory protein, Fis family AMD09_RS19245 PF00593 TonB dependent receptor AMD09_RS19245 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS19250 PF00107 Zinc-binding dehydrogenase AMD09_RS19250 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS19255 PF10282 Lactonase, 7-bladed beta-propeller AMD09_RS19260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD09_RS19265 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD09_RS19265 PF12796 Ankyrin repeats (3 copies) AMD09_RS19265 PF13857 Ankyrin repeats (many copies) AMD09_RS19270 PF13360 PQQ-like domain AMD09_RS19270 PF13570 PQQ-like domain AMD09_RS19275 PF00702 haloacid dehalogenase-like hydrolase AMD09_RS19290 PF01433 Peptidase family M1 AMD09_RS19290 PF09127 Leukotriene A4 hydrolase, C-terminal AMD09_RS19295 PF00672 HAMP domain AMD09_RS19295 PF00990 GGDEF domain AMD09_RS19300 PF01209 ubiE/COQ5 methyltransferase family AMD09_RS19305 PF07690 Major Facilitator Superfamily AMD09_RS19310 PF16576 AMD09_RS19310 AMD09_RS19315 PF13673 Acetyltransferase (GNAT) domain AMD09_RS19320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD09_RS19325 PF00004 ATPase family associated with various cellular activities (AAA) AMD09_RS19325 PF07724 AAA domain (Cdc48 subfamily) AMD09_RS19325 PF10431 C-terminal, D2-small domain, of ClpB protein AMD09_RS19330 PF00227 Proteasome subunit AMD09_RS19335 PF00589 Phage integrase family AMD09_RS19335 PF02899 Phage integrase, N-terminal SAM-like domain AMD09_RS19340 PF04340 Protein of unknown function, DUF484 AMD09_RS19345 PF01678 Diaminopimelate epimerase AMD09_RS19350 PF13627 AMD09_RS19350 AMD09_RS19355 PF04304 AMD09_RS19355 AMD09_RS19360 PF00326 Prolyl oligopeptidase family AMD09_RS19360 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD09_RS19365 PF00155 Aminotransferase class I and II AMD09_RS19375 PF00326 Prolyl oligopeptidase family AMD09_RS19375 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD09_RS19385 PF08212 Lipocalin-like domain AMD09_RS19390 PF08279 HTH domain AMD09_RS19390 PF13280 AMD09_RS19390 AMD09_RS19395 PF04338 Protein of unknown function, DUF481 AMD09_RS19400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD09_RS19400 PF03900 Porphobilinogen deaminase, C-terminal domain AMD09_RS19405 PF00072 Response regulator receiver domain AMD09_RS19405 PF04397 LytTr DNA-binding domain AMD09_RS19410 PF06580 AMD09_RS19410 AMD09_RS19415 PF02230 Phospholipase/Carboxylesterase AMD09_RS19420 PF13632 Glycosyl transferase family group 2 AMD09_RS19430 PF02225 PA domain AMD09_RS19430 PF04389 Peptidase family M28 AMD09_RS19435 PF00990 GGDEF domain AMD09_RS19445 PF00150 Cellulase (glycosyl hydrolase family 5) AMD09_RS19445 PF00553 Cellulose binding domain AMD09_RS19450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS19450 PF00672 HAMP domain AMD09_RS19450 PF17200 AMD09_RS19450 AMD09_RS19455 PF00990 GGDEF domain AMD09_RS19455 PF01590 GAF domain AMD09_RS19455 PF08447 PAS fold AMD09_RS19455 PF08448 PAS fold AMD09_RS19460 PF00675 Insulinase (Peptidase family M16) AMD09_RS19460 PF05193 Peptidase M16 inactive domain AMD09_RS19480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD09_RS19480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD09_RS19485 PF01904 Protein of unknown function DUF72 AMD09_RS19490 PF01204 Trehalase AMD09_RS19495 PF01987 Mitochondrial biogenesis AIM24 AMD09_RS19500 PF01544 CorA-like Mg2+ transporter protein AMD09_RS19510 PF00324 Amino acid permease AMD09_RS19520 PF01695 IstB-like ATP binding protein AMD09_RS19525 PF00665 Integrase core domain AMD09_RS19525 PF13936 Helix-turn-helix domain AMD09_RS19530 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD09_RS19535 PF00892 EamA-like transporter family AMD09_RS19540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMD09_RS19570 PF07759 AMD09_RS19570 AMD09_RS19575 PF00326 Prolyl oligopeptidase family AMD09_RS19575 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD09_RS19580 PF12823 AMD09_RS19580 AMD09_RS19585 PF05708 Orthopoxvirus protein of unknown function (DUF830) AMD09_RS19595 PF13548 AMD09_RS19595 AMD09_RS19600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS19605 PF13409 Glutathione S-transferase, N-terminal domain AMD09_RS19605 PF13410 Glutathione S-transferase, C-terminal domain AMD09_RS19610 PF01145 SPFH domain / Band 7 family AMD09_RS19615 PF14412 AMD09_RS19615 AMD09_RS19620 PF07791 AMD09_RS19620 AMD09_RS19630 PF04002 RadC-like JAB domain AMD09_RS19645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS19655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS19655 PF08448 PAS fold AMD09_RS19660 PF00665 Integrase core domain AMD09_RS19660 PF13936 Helix-turn-helix domain AMD09_RS19665 PF01695 IstB-like ATP binding protein AMD09_RS19690 PF00873 AcrB/AcrD/AcrF family AMD09_RS19695 PF16576 AMD09_RS19695 AMD09_RS19700 PF00009 Elongation factor Tu GTP binding domain AMD09_RS19700 PF01583 Adenylylsulphate kinase AMD09_RS19705 PF01507 Phosphoadenosine phosphosulfate reductase family AMD09_RS19710 PF00175 Oxidoreductase NAD-binding domain AMD09_RS19710 PF00258 Flavodoxin AMD09_RS19710 PF00667 FAD binding domain AMD09_RS19715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD09_RS19715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD09_RS19720 PF01507 Phosphoadenosine phosphosulfate reductase family AMD09_RS19725 PF03929 AMD09_RS19725 AMD09_RS19730 PF00593 TonB dependent receptor AMD09_RS19730 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS19740 PF01590 GAF domain AMD09_RS19740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS19755 PF03466 LysR substrate binding domain AMD09_RS19760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD09_RS19765 PF00291 Pyridoxal-phosphate dependent enzyme AMD09_RS19770 PF04191 Phospholipid methyltransferase AMD09_RS19775 PF01661 Macro domain AMD09_RS19780 PF00274 Fructose-bisphosphate aldolase class-I AMD09_RS19785 PF00224 Pyruvate kinase, barrel domain AMD09_RS19785 PF02887 Pyruvate kinase, alpha/beta domain AMD09_RS19790 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS19795 PF00162 Phosphoglycerate kinase AMD09_RS19800 PF13163 AMD09_RS19800 AMD09_RS19805 PF10101 AMD09_RS19805 AMD09_RS19815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD09_RS19815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD09_RS19820 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD09_RS19825 PF03922 OmpW family AMD09_RS19830 PF03922 OmpW family AMD09_RS19835 PF02265 S1/P1 Nuclease AMD09_RS19840 PF00753 Metallo-beta-lactamase superfamily AMD09_RS19845 PF13531 Bacterial extracellular solute-binding protein AMD09_RS19850 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS19855 PF00005 ABC transporter AMD09_RS19865 PF03544 Gram-negative bacterial TonB protein C-terminal AMD09_RS19865 PF05569 BlaR1 peptidase M56 AMD09_RS19870 PF03965 Penicillinase repressor AMD09_RS19875 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AMD09_RS19880 PF16670 AMD09_RS19880 AMD09_RS19885 PF00593 TonB dependent receptor AMD09_RS19885 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS19890 PF01471 Putative peptidoglycan binding domain AMD09_RS19890 PF03734 L,D-transpeptidase catalytic domain AMD09_RS19895 PF01551 Peptidase family M23 AMD09_RS19905 PF00593 TonB dependent receptor AMD09_RS19905 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS19925 PF00456 Transketolase, thiamine diphosphate binding domain AMD09_RS19925 PF02779 Transketolase, pyrimidine binding domain AMD09_RS19925 PF02780 Transketolase, C-terminal domain AMD09_RS19930 PF00375 Sodium:dicarboxylate symporter family AMD09_RS19935 PF13584 AMD09_RS19935 AMD09_RS19940 PF00515 Tetratricopeptide repeat AMD09_RS19940 PF13519 von Willebrand factor type A domain AMD09_RS19945 PF00092 von Willebrand factor type A domain AMD09_RS19950 PF14316 AMD09_RS19950 AMD09_RS19955 PF01882 AMD09_RS19955 AMD09_RS19960 PF07726 ATPase family associated with various cellular activities (AAA) AMD09_RS19965 PF00263 AMD09_RS19965 AMD09_RS19965 PF03958 Bacterial type II/III secretion system short domain AMD09_RS19965 PF07660 Secretin and TonB N terminus short domain AMD09_RS19970 PF04351 Pilus assembly protein, PilP AMD09_RS19975 PF04350 Pilus assembly protein, PilO AMD09_RS19980 PF05137 AMD09_RS19980 AMD09_RS19985 PF11104 Type IV pilus assembly protein PilM; AMD09_RS19990 PF00905 Penicillin binding protein transpeptidase domain AMD09_RS19990 PF00912 Transglycosylase AMD09_RS19990 PF17092 AMD09_RS19990 AMD09_RS20000 PF00285 Citrate synthase AMD09_RS20005 PF01197 Ribosomal protein L31 AMD09_RS20010 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD09_RS20015 PF00270 DEAD/DEAH box helicase AMD09_RS20015 PF00271 Helicase conserved C-terminal domain AMD09_RS20015 PF17191 AMD09_RS20015 AMD09_RS20020 PF01042 Endoribonuclease L-PSP AMD09_RS20025 PF02824 TGS domain AMD09_RS20025 PF04607 Region found in RelA / SpoT proteins AMD09_RS20025 PF13291 ACT domain AMD09_RS20025 PF13328 HD domain AMD09_RS20030 PF01192 RNA polymerase Rpb6 AMD09_RS20035 PF00625 Guanylate kinase AMD09_RS20040 PF03755 AMD09_RS20040 AMD09_RS20040 PF08340 AMD09_RS20040 AMD09_RS20045 PF01138 3' exoribonuclease family, domain 1 AMD09_RS20045 PF03725 3' exoribonuclease family, domain 2 AMD09_RS20050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS20055 PF01725 Ham1 family AMD09_RS20060 PF04055 Radical SAM superfamily AMD09_RS20060 PF06969 HemN C-terminal domain AMD09_RS20065 PF07793 AMD09_RS20065 AMD09_RS20070 PF07238 PilZ domain AMD09_RS20075 PF00557 Metallopeptidase family M24 AMD09_RS20085 PF00557 Metallopeptidase family M24 AMD09_RS20085 PF05195 Aminopeptidase P, N-terminal domain AMD09_RS20090 PF03695 Uncharacterised protein family (UPF0149) AMD09_RS20100 PF05164 Cell division protein ZapA AMD09_RS20105 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD09_RS20110 PF01878 EVE domain AMD09_RS20115 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD09_RS20120 PF02643 Uncharacterized ACR, COG1430 AMD09_RS20125 PF13369 AMD09_RS20125 AMD09_RS20125 PF13371 Tetratricopeptide repeat AMD09_RS20130 PF00301 Rubredoxin AMD09_RS20135 PF02581 Thiamine monophosphate synthase/TENI AMD09_RS20140 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20150 PF00202 Aminotransferase class-III AMD09_RS20155 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS20155 PF13424 Tetratricopeptide repeat AMD09_RS20155 PF13481 AAA domain AMD09_RS20160 PF00127 Copper binding proteins, plastocyanin/azurin family AMD09_RS20165 PF00155 Aminotransferase class I and II AMD09_RS20170 PF01042 Endoribonuclease L-PSP AMD09_RS20175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD09_RS20180 PF01593 Flavin containing amine oxidoreductase AMD09_RS20185 PF00593 TonB dependent receptor AMD09_RS20185 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20195 PF00202 Aminotransferase class-III AMD09_RS20200 PF00520 Ion transport protein AMD09_RS20205 PF00106 short chain dehydrogenase AMD09_RS20215 PF01569 PAP2 superfamily AMD09_RS20215 PF09335 AMD09_RS20215 AMD09_RS20215 PF14067 AMD09_RS20215 AMD09_RS20220 PF01062 AMD09_RS20220 AMD09_RS20225 PF02190 ATP-dependent protease La (LON) domain AMD09_RS20230 PF01225 Mur ligase family, catalytic domain AMD09_RS20230 PF02875 Mur ligase family, glutamate ligase domain AMD09_RS20230 PF08245 Mur ligase middle domain AMD09_RS20235 PF00406 Adenylate kinase AMD09_RS20240 PF00365 Phosphofructokinase AMD09_RS20250 PF03030 Inorganic H+ pyrophosphatase AMD09_RS20260 PF00719 Inorganic pyrophosphatase AMD09_RS20265 PF08668 HDOD domain AMD09_RS20270 PF00593 TonB dependent receptor AMD09_RS20270 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20275 PF12833 Helix-turn-helix domain AMD09_RS20280 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS20280 PF07676 WD40-like Beta Propeller Repeat AMD09_RS20285 PF01964 ThiC family AMD09_RS20285 PF13667 ThiC-associated domain AMD09_RS20290 PF00593 TonB dependent receptor AMD09_RS20290 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS20300 PF01019 Gamma-glutamyltranspeptidase AMD09_RS20305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD09_RS20305 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMD09_RS20310 PF00205 Thiamine pyrophosphate enzyme, central domain AMD09_RS20310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD09_RS20310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD09_RS20315 PF13710 ACT domain AMD09_RS20320 PF00291 Pyridoxal-phosphate dependent enzyme AMD09_RS20325 PF00682 HMGL-like AMD09_RS20325 PF08502 LeuA allosteric (dimerisation) domain AMD09_RS20330 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD09_RS20335 PF00694 Aconitase C-terminal domain AMD09_RS20340 PF00330 Aconitase family (aconitate hydratase) AMD09_RS20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS20345 PF03466 LysR substrate binding domain AMD09_RS20350 PF00990 GGDEF domain AMD09_RS20350 PF07494 Two component regulator propeller AMD09_RS20350 PF07495 Y_Y_Y domain AMD09_RS20355 PF00440 Bacterial regulatory proteins, tetR family AMD09_RS20355 PF14246 AefR-like transcriptional repressor, C-terminal region AMD09_RS20360 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD09_RS20365 PF02321 Outer membrane efflux protein AMD09_RS20370 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD09_RS20375 PF03279 AMD09_RS20375 AMD09_RS20380 PF04932 AMD09_RS20380 AMD09_RS20385 PF00534 Glycosyl transferases group 1 AMD09_RS20385 PF13439 Glycosyltransferase Family 4 AMD09_RS20390 PF10276 Zinc-finger domain AMD09_RS20400 PF00390 Malic enzyme, N-terminal domain AMD09_RS20400 PF01515 Phosphate acetyl/butaryl transferase AMD09_RS20400 PF03949 Malic enzyme, NAD binding domain AMD09_RS20405 PF00375 Sodium:dicarboxylate symporter family AMD09_RS20410 PF07396 Phosphate-selective porin O and P AMD09_RS20415 PF00072 Response regulator receiver domain AMD09_RS20415 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS20415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS20415 PF02743 Cache domain AMD09_RS20415 PF12860 AMD09_RS20415 AMD09_RS20420 PF00083 Sugar (and other) transporter AMD09_RS20425 PF13531 Bacterial extracellular solute-binding protein AMD09_RS20430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS20430 PF03466 LysR substrate binding domain AMD09_RS20435 PF00248 Aldo/keto reductase family AMD09_RS20440 PF12680 SnoaL-like domain AMD09_RS20445 PF11512 Agrobacterium tumefaciens protein Atu4866 AMD09_RS20450 PF00072 Response regulator receiver domain AMD09_RS20450 PF00196 Bacterial regulatory proteins, luxR family AMD09_RS20455 PF13531 Bacterial extracellular solute-binding protein AMD09_RS20460 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS20460 PF08521 AMD09_RS20460 AMD09_RS20465 PF00072 Response regulator receiver domain AMD09_RS20465 PF00486 Transcriptional regulatory protein, C terminal AMD09_RS20470 PF07396 Phosphate-selective porin O and P AMD09_RS20475 PF03600 Citrate transporter AMD09_RS20480 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS20485 PF00356 Bacterial regulatory proteins, lacI family AMD09_RS20485 PF13377 Periplasmic binding protein-like domain AMD09_RS20490 PF07690 Major Facilitator Superfamily AMD09_RS20495 PF00593 TonB dependent receptor AMD09_RS20495 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20500 PF00128 Alpha amylase, catalytic domain AMD09_RS20505 PF01965 DJ-1/PfpI family AMD09_RS20510 PF08014 AMD09_RS20510 AMD09_RS20515 PF03193 Protein of unknown function, DUF258 AMD09_RS20520 PF00155 Aminotransferase class I and II AMD09_RS20525 PF13472 GDSL-like Lipase/Acylhydrolase family AMD09_RS20530 PF08242 Methyltransferase domain AMD09_RS20535 PF00593 TonB dependent receptor AMD09_RS20535 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20540 PF01522 Polysaccharide deacetylase AMD09_RS20545 PF00462 Glutaredoxin AMD09_RS20545 PF00581 Rhodanese-like domain AMD09_RS20555 PF06041 Bacterial protein of unknown function (DUF924) AMD09_RS20560 PF01527 Transposase AMD09_RS20565 PF13683 AMD09_RS20565 AMD09_RS20570 PF09284 Rhamnogalacturonase B, N-terminal AMD09_RS20570 PF14683 Polysaccharide lyase family 4, domain III AMD09_RS20570 PF14686 Polysaccharide lyase family 4, domain II AMD09_RS20580 PF02645 Uncharacterised protein, DegV family COG1307 AMD09_RS20585 PF01327 Polypeptide deformylase AMD09_RS20590 PF03960 ArsC family AMD09_RS20600 PF02225 PA domain AMD09_RS20610 PF01270 Glycosyl hydrolases family 8 AMD09_RS20615 PF03170 Bacterial cellulose synthase subunit AMD09_RS20620 PF00535 Glycosyl transferase family 2 AMD09_RS20620 PF07238 PilZ domain AMD09_RS20635 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD09_RS20655 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD09_RS20655 PF13641 Glycosyltransferase like family 2 AMD09_RS20665 PF00535 Glycosyl transferase family 2 AMD09_RS20675 PF01636 Phosphotransferase enzyme family AMD09_RS20680 PF00593 TonB dependent receptor AMD09_RS20680 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20685 PF04973 AMD09_RS20685 AMD09_RS20690 PF00392 Bacterial regulatory proteins, gntR family AMD09_RS20690 PF07702 UTRA domain AMD09_RS20700 PF00263 AMD09_RS20700 AMD09_RS20700 PF03958 Bacterial type II/III secretion system short domain AMD09_RS20710 PF10741 AMD09_RS20710 AMD09_RS20715 PF05137 AMD09_RS20715 AMD09_RS20720 PF03934 Type II secretion system (T2SS), protein K AMD09_RS20730 PF13544 AMD09_RS20730 AMD09_RS20735 PF12019 Type II transport protein GspH AMD09_RS20740 PF08334 Type II secretion system (T2SS), protein G AMD09_RS20745 PF00482 Type II secretion system (T2SS), protein F AMD09_RS20750 PF00437 Type II/IV secretion system protein AMD09_RS20750 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD09_RS20755 PF00082 Subtilase family AMD09_RS20755 PF04151 Bacterial pre-peptidase C-terminal domain AMD09_RS20760 PF05658 Head domain of trimeric autotransporter adhesin AMD09_RS20760 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD09_RS20760 PF13018 AMD09_RS20760 AMD09_RS20765 PF00082 Subtilase family AMD09_RS20765 PF04151 Bacterial pre-peptidase C-terminal domain AMD09_RS20770 PF03895 YadA-like C-terminal region AMD09_RS20770 PF05658 Head domain of trimeric autotransporter adhesin AMD09_RS20770 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD09_RS20780 PF02769 AIR synthase related protein, C-terminal domain AMD09_RS20780 PF13507 CobB/CobQ-like glutamine amidotransferase domain AMD09_RS20785 PF10411 Disulfide bond isomerase protein N-terminus AMD09_RS20785 PF13098 Thioredoxin-like domain AMD09_RS20790 PF00589 Phage integrase family AMD09_RS20790 PF02899 Phage integrase, N-terminal SAM-like domain AMD09_RS20795 PF06271 AMD09_RS20795 AMD09_RS20805 PF03739 AMD09_RS20805 AMD09_RS20810 PF03739 AMD09_RS20810 AMD09_RS20815 PF00883 Cytosol aminopeptidase family, catalytic domain AMD09_RS20815 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD09_RS20825 PF04364 DNA polymerase III chi subunit, HolC AMD09_RS20830 PF00133 tRNA synthetases class I (I, L, M and V) AMD09_RS20830 PF08264 Anticodon-binding domain of tRNA AMD09_RS20830 PF10458 Valyl tRNA synthetase tRNA binding arm AMD09_RS20835 PF00593 TonB dependent receptor AMD09_RS20835 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS20840 PF01464 Transglycosylase SLT domain AMD09_RS20840 PF14718 Soluble lytic murein transglycosylase L domain AMD09_RS20845 PF00544 Pectate lyase AMD09_RS20850 PF00583 Acetyltransferase (GNAT) family AMD09_RS20860 PF01066 CDP-alcohol phosphatidyltransferase AMD09_RS20865 PF13511 AMD09_RS20865 AMD09_RS20870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD09_RS20870 PF03129 Anticodon binding domain AMD09_RS20870 PF04073 Aminoacyl-tRNA editing domain AMD09_RS20875 PF00816 H-NS histone family AMD09_RS20880 PF06738 AMD09_RS20880 AMD09_RS20880 PF12821 AMD09_RS20880 AMD09_RS20885 PF02405 AMD09_RS20885 AMD09_RS20890 PF00005 ABC transporter AMD09_RS20895 PF02470 AMD09_RS20895 AMD09_RS20900 PF03886 Protein of unknown function (DUF330) AMD09_RS20905 PF13532 2OG-Fe(II) oxygenase superfamily AMD09_RS20910 PF01946 Thi4 family AMD09_RS20910 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AMD09_RS20915 PF05045 AMD09_RS20915 AMD09_RS20915 PF14307 AMD09_RS20915 AMD09_RS20920 PF01144 Coenzyme A transferase AMD09_RS20925 PF01144 Coenzyme A transferase AMD09_RS20930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD09_RS20930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD09_RS20930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD09_RS20930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD09_RS20935 PF00483 Nucleotidyl transferase AMD09_RS20935 PF01050 Mannose-6-phosphate isomerase AMD09_RS20940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD09_RS20940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD09_RS20940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD09_RS20945 PF04321 RmlD substrate binding domain AMD09_RS20950 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD09_RS20955 PF00483 Nucleotidyl transferase AMD09_RS20960 PF16363 AMD09_RS20960 AMD09_RS20965 PF01012 Electron transfer flavoprotein domain AMD09_RS20970 PF00766 Electron transfer flavoprotein FAD-binding domain AMD09_RS20970 PF01012 Electron transfer flavoprotein domain AMD09_RS20975 PF03706 AMD09_RS20975 AMD09_RS20980 PF01040 UbiA prenyltransferase family AMD09_RS20985 PF01565 FAD binding domain AMD09_RS20990 PF00106 short chain dehydrogenase AMD09_RS21000 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS21005 PF01593 Flavin containing amine oxidoreductase AMD09_RS21010 PF04138 AMD09_RS21010 AMD09_RS21020 PF08241 Methyltransferase domain AMD09_RS21025 PF05045 AMD09_RS21025 AMD09_RS21030 PF14307 AMD09_RS21030 AMD09_RS21035 PF13578 Methyltransferase domain AMD09_RS21040 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS21045 PF00005 ABC transporter AMD09_RS21045 PF14524 Wzt C-terminal domain AMD09_RS21050 PF01061 AMD09_RS21050 AMD09_RS21055 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD09_RS21060 PF00291 Pyridoxal-phosphate dependent enzyme AMD09_RS21060 PF00571 CBS domain AMD09_RS21065 PF04325 Protein of unknown function (DUF465) AMD09_RS21075 PF14346 Domain of unknown function (DUF4398) AMD09_RS21080 PF00437 Type II/IV secretion system protein AMD09_RS21085 PF13410 Glutathione S-transferase, C-terminal domain AMD09_RS21085 PF13417 Glutathione S-transferase, N-terminal domain AMD09_RS21090 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD09_RS21095 PF00270 DEAD/DEAH box helicase AMD09_RS21095 PF00271 Helicase conserved C-terminal domain AMD09_RS21100 PF02225 PA domain AMD09_RS21100 PF04253 Transferrin receptor-like dimerisation domain AMD09_RS21100 PF04389 Peptidase family M28 AMD09_RS21105 PF00593 TonB dependent receptor AMD09_RS21105 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS21110 PF01242 6-pyruvoyl tetrahydropterin synthase AMD09_RS21115 PF09361 AMD09_RS21115 AMD09_RS21120 PF13500 AAA domain AMD09_RS21130 PF13185 GAF domain AMD09_RS21135 PF04994 TfoX C-terminal domain AMD09_RS21140 PF00756 Putative esterase AMD09_RS21145 PF00593 TonB dependent receptor AMD09_RS21145 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS21150 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS21155 PF00817 impB/mucB/samB family AMD09_RS21155 PF11799 impB/mucB/samB family C-terminal domain AMD09_RS21160 PF07977 FabA-like domain AMD09_RS21165 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD09_RS21165 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD09_RS21175 PF01432 Peptidase family M3 AMD09_RS21180 PF00291 Pyridoxal-phosphate dependent enzyme AMD09_RS21190 PF00394 Multicopper oxidase AMD09_RS21190 PF07731 Multicopper oxidase AMD09_RS21190 PF07732 Multicopper oxidase AMD09_RS21195 PF05275 AMD09_RS21195 AMD09_RS21200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD09_RS21210 PF01471 Putative peptidoglycan binding domain AMD09_RS21225 PF01380 SIS domain AMD09_RS21225 PF13522 Glutamine amidotransferase domain AMD09_RS21230 PF13437 HlyD family secretion protein AMD09_RS21230 PF13533 Biotin-lipoyl like AMD09_RS21235 PF00005 ABC transporter AMD09_RS21240 PF02687 AMD09_RS21240 AMD09_RS21240 PF12704 MacB-like periplasmic core domain AMD09_RS21245 PF02687 AMD09_RS21245 AMD09_RS21245 PF12704 MacB-like periplasmic core domain AMD09_RS21255 PF00072 Response regulator receiver domain AMD09_RS21255 PF00158 Sigma-54 interaction domain AMD09_RS21255 PF02954 Bacterial regulatory protein, Fis family AMD09_RS21260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS21265 PF00132 Bacterial transferase hexapeptide (six repeats) AMD09_RS21265 PF12804 MobA-like NTP transferase domain AMD09_RS21265 PF14602 Hexapeptide repeat of succinyl-transferase AMD09_RS21270 PF04138 AMD09_RS21270 AMD09_RS21275 PF01817 Chorismate mutase type II AMD09_RS21280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD09_RS21280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD09_RS21285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD09_RS21285 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD09_RS21290 PF00231 ATP synthase AMD09_RS21295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD09_RS21295 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD09_RS21295 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD09_RS21300 PF00213 ATP synthase delta (OSCP) subunit AMD09_RS21305 PF00430 ATP synthase B/B' CF(0) AMD09_RS21310 PF00137 ATP synthase subunit C AMD09_RS21315 PF00119 ATP synthase A chain AMD09_RS21335 PF00364 Biotin-requiring enzyme AMD09_RS21335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD09_RS21335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS21345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD09_RS21345 PF00364 Biotin-requiring enzyme AMD09_RS21345 PF02817 e3 binding domain AMD09_RS21350 PF11101 AMD09_RS21350 AMD09_RS21355 PF03167 Uracil DNA glycosylase superfamily AMD09_RS21360 PF03922 OmpW family AMD09_RS21385 PF03180 NLPA lipoprotein AMD09_RS21390 PF00528 Binding-protein-dependent transport system inner membrane component AMD09_RS21395 PF00005 ABC transporter AMD09_RS21395 PF09383 NIL domain AMD09_RS21400 PF00892 EamA-like transporter family AMD09_RS21405 PF04461 Protein of unknown function (DUF520) AMD09_RS21415 PF00072 Response regulator receiver domain AMD09_RS21415 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS21420 PF12146 Putative lysophospholipase AMD09_RS21425 PF07209 AMD09_RS21425 AMD09_RS21435 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS21440 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS21445 PF00849 RNA pseudouridylate synthase AMD09_RS21450 PF05175 Methyltransferase small domain AMD09_RS21460 PF07995 Glucose / Sorbosone dehydrogenase AMD09_RS21465 PF11607 Protein of unknown function (DUF3247) AMD09_RS21470 PF00072 Response regulator receiver domain AMD09_RS21470 PF00512 His Kinase A (phospho-acceptor) domain AMD09_RS21470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS21470 PF08448 PAS fold AMD09_RS21470 PF13188 PAS domain AMD09_RS21485 PF11454 AMD09_RS21485 AMD09_RS21490 PF00842 Alanine racemase, C-terminal domain AMD09_RS21490 PF01168 Alanine racemase, N-terminal domain AMD09_RS21495 PF01266 FAD dependent oxidoreductase AMD09_RS21500 PF01037 AsnC family AMD09_RS21500 PF13404 AsnC-type helix-turn-helix domain AMD09_RS21510 PF01641 SelR domain AMD09_RS21515 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AMD09_RS21520 PF01618 AMD09_RS21520 AMD09_RS21525 PF00691 OmpA family AMD09_RS21525 PF13677 AMD09_RS21525 AMD09_RS21535 PF13223 AMD09_RS21535 AMD09_RS21545 PF11730 AMD09_RS21545 AMD09_RS21550 PF01061 AMD09_RS21550 AMD09_RS21555 PF00005 ABC transporter AMD09_RS21560 PF00999 Sodium/hydrogen exchanger family AMD09_RS21565 PF02469 Fasciclin domain AMD09_RS21570 PF03167 Uracil DNA glycosylase superfamily AMD09_RS21570 PF13566 AMD09_RS21570 AMD09_RS21575 PF04055 Radical SAM superfamily AMD09_RS21580 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD09_RS21585 PF07681 AMD09_RS21585 AMD09_RS21590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS21590 PF03466 LysR substrate binding domain AMD09_RS21595 PF03358 NADPH-dependent FMN reductase AMD09_RS21600 PF00248 Aldo/keto reductase family AMD09_RS21605 PF00535 Glycosyl transferase family 2 AMD09_RS21610 PF01431 Peptidase family M13 AMD09_RS21610 PF05649 Peptidase family M13 AMD09_RS21615 PF09995 AMD09_RS21615 AMD09_RS21630 PF13520 Amino acid permease AMD09_RS21640 PF00072 Response regulator receiver domain AMD09_RS21640 PF04397 LytTr DNA-binding domain AMD09_RS21645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD09_RS21645 PF06580 AMD09_RS21645 AMD09_RS21650 PF01266 FAD dependent oxidoreductase AMD09_RS21660 PF05974 Domain of unknown function (DUF892) AMD09_RS21665 PF05067 Manganese containing catalase AMD09_RS21685 PF01339 CheB methylesterase AMD09_RS21685 PF01739 CheR methyltransferase, SAM binding domain AMD09_RS21685 PF03705 CheR methyltransferase, all-alpha domain AMD09_RS21685 PF07536 AMD09_RS21685 AMD09_RS21685 PF08447 PAS fold AMD09_RS21685 PF13596 PAS domain AMD09_RS21690 PF00072 Response regulator receiver domain AMD09_RS21700 PF00072 Response regulator receiver domain AMD09_RS21700 PF00158 Sigma-54 interaction domain AMD09_RS21700 PF02954 Bacterial regulatory protein, Fis family AMD09_RS21710 PF01654 AMD09_RS21710 AMD09_RS21715 PF02322 AMD09_RS21715 AMD09_RS21730 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS21735 PF01370 NAD dependent epimerase/dehydratase family AMD09_RS21740 PF13692 Glycosyl transferases group 1 AMD09_RS21745 PF03275 UDP-galactopyranose mutase AMD09_RS21745 PF13450 NAD(P)-binding Rossmann-like domain AMD09_RS21755 PF00005 ABC transporter AMD09_RS21755 PF00664 ABC transporter transmembrane region AMD09_RS21760 PF12244 AMD09_RS21760 AMD09_RS21765 PF13628 AMD09_RS21765 AMD09_RS21770 PF00107 Zinc-binding dehydrogenase AMD09_RS21770 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS21770 PF13823 Alcohol dehydrogenase GroES-associated AMD09_RS21780 PF03692 AMD09_RS21780 AMD09_RS21795 PF11828 AMD09_RS21795 AMD09_RS21800 PF05650 AMD09_RS21800 AMD09_RS21805 PF00691 OmpA family AMD09_RS21810 PF11445 AMD09_RS21810 AMD09_RS21815 PF00593 TonB dependent receptor AMD09_RS21815 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS21820 PF12040 AMD09_RS21820 AMD09_RS21825 PF12040 AMD09_RS21825 AMD09_RS21825 PF12679 AMD09_RS21825 AMD09_RS21830 PF00005 ABC transporter AMD09_RS21835 PF00246 Zinc carboxypeptidase AMD09_RS21840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS21840 PF03466 LysR substrate binding domain AMD09_RS21845 PF01042 Endoribonuclease L-PSP AMD09_RS21855 PF12849 PBP superfamily domain AMD09_RS21860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD09_RS21860 PF00672 HAMP domain AMD09_RS21865 PF01223 DNA/RNA non-specific endonuclease AMD09_RS21870 PF12697 Alpha/beta hydrolase family AMD09_RS21880 PF02525 Flavodoxin-like fold AMD09_RS21885 PF03795 YCII-related domain AMD09_RS21895 PF07866 Protein of unknown function (DUF1653) AMD09_RS21920 PF00557 Metallopeptidase family M24 AMD09_RS21925 PF11903 AMD09_RS21925 AMD09_RS21930 PF01695 IstB-like ATP binding protein AMD09_RS21935 PF00665 Integrase core domain AMD09_RS21935 PF13936 Helix-turn-helix domain AMD09_RS21940 PF01527 Transposase AMD09_RS21945 PF00665 Integrase core domain AMD09_RS21945 PF13276 AMD09_RS21945 AMD09_RS21955 PF00717 Peptidase S24-like AMD09_RS21960 PF00817 impB/mucB/samB family AMD09_RS21960 PF11799 impB/mucB/samB family C-terminal domain AMD09_RS21960 PF13438 AMD09_RS21960 AMD09_RS21980 PF01555 DNA methylase AMD09_RS21990 PF04860 Phage portal protein AMD09_RS21995 PF03237 Terminase-like family AMD09_RS21995 PF06056 Putative ATPase subunit of terminase (gpP-like) AMD09_RS22000 PF05929 AMD09_RS22000 AMD09_RS22005 PF05125 AMD09_RS22005 AMD09_RS22010 PF05944 AMD09_RS22010 AMD09_RS22015 PF05926 AMD09_RS22015 AMD09_RS22020 PF05489 Phage Tail Protein X AMD09_RS22025 PF16931 AMD09_RS22025 AMD09_RS22030 PF05449 AMD09_RS22030 AMD09_RS22045 PF06891 AMD09_RS22045 AMD09_RS22050 PF05069 AMD09_RS22050 AMD09_RS22055 PF04865 AMD09_RS22055 AMD09_RS22060 PF09684 AMD09_RS22060 AMD09_RS22080 PF04717 Phage-related baseplate assembly protein AMD09_RS22085 PF04965 Gene 25-like lysozyme AMD09_RS22090 PF04984 Phage tail sheath protein AMD09_RS22095 PF04985 AMD09_RS22095 AMD09_RS22100 PF10109 AMD09_RS22100 AMD09_RS22110 PF06995 AMD09_RS22110 AMD09_RS22115 PF05954 Phage late control gene D protein (GPD) AMD09_RS22125 PF04606 AMD09_RS22125 AMD09_RS22140 PF13155 Toprim-like AMD09_RS22145 PF01695 IstB-like ATP binding protein AMD09_RS22150 PF00665 Integrase core domain AMD09_RS22150 PF13936 Helix-turn-helix domain AMD09_RS22215 PF00140 Sigma-70 factor, region 1 AMD09_RS22215 PF03979 Sigma-70 factor, region 1 AMD09_RS22215 PF04539 Sigma-70 region 3 AMD09_RS22215 PF04542 Sigma-70 region 2 AMD09_RS22215 PF04545 Sigma-70, region 4 AMD09_RS22215 PF04546 Sigma-70, non-essential region AMD09_RS22220 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD09_RS22225 PF03279 AMD09_RS22225 AMD09_RS22230 PF13420 Acetyltransferase (GNAT) domain AMD09_RS22240 PF00925 GTP cyclohydrolase II AMD09_RS22245 PF03703 AMD09_RS22245 AMD09_RS22250 PF03703 AMD09_RS22250 AMD09_RS22255 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD09_RS22260 PF00535 Glycosyl transferase family 2 AMD09_RS22265 PF04932 AMD09_RS22265 AMD09_RS22270 PF13231 AMD09_RS22270 AMD09_RS22275 PF01029 NusB family AMD09_RS22275 PF01189 NOL1/NOP2/sun family AMD09_RS22280 PF00551 Formyl transferase AMD09_RS22280 PF02911 Formyl transferase, C-terminal domain AMD09_RS22285 PF01327 Polypeptide deformylase AMD09_RS22290 PF01476 LysM domain AMD09_RS22295 PF02481 DNA recombination-mediator protein A AMD09_RS22300 PF04361 AMD09_RS22300 AMD09_RS22305 PF00114 Pilin (bacterial filament) AMD09_RS22305 PF14237 AMD09_RS22305 AMD09_RS22310 PF06271 AMD09_RS22310 AMD09_RS22310 PF14237 AMD09_RS22310 AMD09_RS22315 PF01131 DNA topoisomerase AMD09_RS22315 PF01751 Toprim domain AMD09_RS22315 PF13368 AMD09_RS22315 AMD09_RS22320 PF01300 Telomere recombination AMD09_RS22335 PF13561 Enoyl-(Acyl carrier protein) reductase AMD09_RS22345 PF01343 Peptidase family S49 AMD09_RS22350 PF01554 MatE AMD09_RS22355 PF12412 AMD09_RS22355 AMD09_RS22360 PF11304 AMD09_RS22360 AMD09_RS22370 PF00270 DEAD/DEAH box helicase AMD09_RS22370 PF00271 Helicase conserved C-terminal domain AMD09_RS22375 PF13410 Glutathione S-transferase, C-terminal domain AMD09_RS22375 PF13417 Glutathione S-transferase, N-terminal domain AMD09_RS22380 PF01936 NYN domain AMD09_RS22380 PF12872 OST-HTH/LOTUS domain AMD09_RS22390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD09_RS22395 PF03458 AMD09_RS22395 AMD09_RS22400 PF00140 Sigma-70 factor, region 1 AMD09_RS22400 PF04542 Sigma-70 region 2 AMD09_RS22400 PF04545 Sigma-70, region 4 AMD09_RS22405 PF03167 Uracil DNA glycosylase superfamily AMD09_RS22410 PF00072 Response regulator receiver domain AMD09_RS22415 PF02687 AMD09_RS22415 AMD09_RS22420 PF00005 ABC transporter AMD09_RS22425 PF00270 DEAD/DEAH box helicase AMD09_RS22425 PF00271 Helicase conserved C-terminal domain AMD09_RS22425 PF12300 AMD09_RS22425 AMD09_RS22430 PF00085 Thioredoxin AMD09_RS22435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD09_RS22435 PF07497 Rho termination factor, RNA-binding domain AMD09_RS22435 PF07498 Rho termination factor, N-terminal domain AMD09_RS22440 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD09_RS22445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS22445 PF03466 LysR substrate binding domain AMD09_RS22455 PF03971 Monomeric isocitrate dehydrogenase AMD09_RS22465 PF00270 DEAD/DEAH box helicase AMD09_RS22475 PF09709 AMD09_RS22475 AMD09_RS22480 PF05107 AMD09_RS22480 AMD09_RS22485 PF01930 Domain of unknown function DUF83 AMD09_RS22490 PF01867 CRISPR associated protein Cas1 AMD09_RS22500 PF00665 Integrase core domain AMD09_RS22500 PF13936 Helix-turn-helix domain AMD09_RS22505 PF01695 IstB-like ATP binding protein AMD09_RS22515 PF01476 LysM domain AMD09_RS22520 PF14489 QueF-like protein AMD09_RS22520 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD09_RS22525 PF01546 Peptidase family M20/M25/M40 AMD09_RS22525 PF07687 Peptidase dimerisation domain AMD09_RS22530 PF16576 AMD09_RS22530 AMD09_RS22535 PF00873 AcrB/AcrD/AcrF family AMD09_RS22540 PF00873 AcrB/AcrD/AcrF family AMD09_RS22545 PF07063 Domain of unknown function (DUF1338) AMD09_RS22560 PF13419 Haloacid dehalogenase-like hydrolase AMD09_RS22565 PF13202 EF hand AMD09_RS22570 PF13202 EF hand AMD09_RS22580 PF14255 AMD09_RS22580 AMD09_RS22585 PF01427 D-ala-D-ala dipeptidase AMD09_RS22590 PF01510 N-acetylmuramoyl-L-alanine amidase AMD09_RS22595 PF00877 NlpC/P60 family AMD09_RS22595 PF12913 SH3 domain of the SH3b1 type AMD09_RS22595 PF12914 SH3 domain of SH3b2 type AMD09_RS22600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD09_RS22600 PF13378 Enolase C-terminal domain-like AMD09_RS22610 PF13520 Amino acid permease AMD09_RS22625 PF05360 AMD09_RS22625 AMD09_RS22630 PF07995 Glucose / Sorbosone dehydrogenase AMD09_RS22635 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD09_RS22635 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD09_RS22635 PF14310 Fibronectin type III-like domain AMD09_RS22640 PF02152 Dihydroneopterin aldolase AMD09_RS22645 PF00814 Glycoprotease family AMD09_RS22650 PF01165 Ribosomal protein S21 AMD09_RS22655 PF09424 Yqey-like protein AMD09_RS22660 PF03631 AMD09_RS22660 AMD09_RS22665 PF01807 CHC2 zinc finger AMD09_RS22665 PF08275 DNA primase catalytic core, N-terminal domain AMD09_RS22665 PF08278 DNA primase DnaG DnaB-binding AMD09_RS22665 PF10410 DnaB-helicase binding domain of primase AMD09_RS22665 PF13155 Toprim-like AMD09_RS22670 PF13593 SBF-like CPA transporter family (DUF4137) AMD09_RS22675 PF13899 Thioredoxin-like AMD09_RS22680 PF01040 UbiA prenyltransferase family AMD09_RS22685 PF02628 AMD09_RS22685 AMD09_RS22695 PF02104 AMD09_RS22695 AMD09_RS22700 PF11137 AMD09_RS22700 AMD09_RS22705 PF00510 Cytochrome c oxidase subunit III AMD09_RS22710 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD09_RS22715 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD09_RS22720 PF10003 AMD09_RS22720 AMD09_RS22725 PF00171 Aldehyde dehydrogenase family AMD09_RS22725 PF01619 Proline dehydrogenase AMD09_RS22725 PF14850 DNA-binding domain of Proline dehydrogenase AMD09_RS22765 PF03594 AMD09_RS22765 AMD09_RS22770 PF00360 Phytochrome region AMD09_RS22770 PF01590 GAF domain AMD09_RS22770 PF08446 PAS fold AMD09_RS22770 PF08448 PAS fold AMD09_RS22775 PF01126 Heme oxygenase AMD09_RS22780 PF07690 Major Facilitator Superfamily AMD09_RS22785 PF01263 Aldose 1-epimerase AMD09_RS22785 PF01471 Putative peptidoglycan binding domain AMD09_RS22785 PF13406 Transglycosylase SLT domain AMD09_RS22800 PF01925 AMD09_RS22800 AMD09_RS22805 PF13555 P-loop containing region of AAA domain AMD09_RS22805 PF13558 Putative exonuclease SbcCD, C subunit AMD09_RS22810 PF13835 AMD09_RS22810 AMD09_RS22815 PF11855 AMD09_RS22815 AMD09_RS22820 PF01227 GTP cyclohydrolase I AMD09_RS22825 PF12802 MarR family AMD09_RS22830 PF07869 AMD09_RS22830 AMD09_RS22835 PF13437 HlyD family secretion protein AMD09_RS22835 PF13533 Biotin-lipoyl like AMD09_RS22840 PF02321 Outer membrane efflux protein AMD09_RS22845 PF04632 AMD09_RS22845 AMD09_RS22850 PF00083 Sugar (and other) transporter AMD09_RS22855 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD09_RS22860 PF13091 PLD-like domain AMD09_RS22875 PF05016 Plasmid stabilisation system protein AMD09_RS22880 PF03869 Arc-like DNA binding domain AMD09_RS22885 PF01850 PIN domain AMD09_RS22890 PF00756 Putative esterase AMD09_RS22895 PF09722 AMD09_RS22895 AMD09_RS22910 PF00849 RNA pseudouridylate synthase AMD09_RS22920 PF01527 Transposase AMD09_RS22930 PF13333 AMD09_RS22930 AMD09_RS22935 PF07080 Protein of unknown function (DUF1348) AMD09_RS22940 PF01609 Transposase DDE domain AMD09_RS22945 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD09_RS22945 PF00364 Biotin-requiring enzyme AMD09_RS22945 PF02626 Allophanate hydrolase subunit 2 AMD09_RS22945 PF02682 Allophanate hydrolase subunit 1 AMD09_RS22945 PF02785 Biotin carboxylase C-terminal domain AMD09_RS22945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD09_RS22950 PF01425 Amidase AMD09_RS22955 PF01609 Transposase DDE domain AMD09_RS22960 PF07080 Protein of unknown function (DUF1348) AMD09_RS22970 PF05299 M61 glycyl aminopeptidase AMD09_RS22975 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD09_RS22980 PF13538 UvrD-like helicase C-terminal domain AMD09_RS22980 PF13604 AAA domain AMD09_RS22985 PF00580 UvrD/REP helicase N-terminal domain AMD09_RS22985 PF12705 PD-(D/E)XK nuclease superfamily AMD09_RS22985 PF13361 UvrD-like helicase C-terminal domain AMD09_RS22990 PF04257 Exodeoxyribonuclease V, gamma subunit AMD09_RS23005 PF00005 ABC transporter AMD09_RS23010 PF02405 AMD09_RS23010 AMD09_RS23015 PF02470 AMD09_RS23015 AMD09_RS23020 PF05494 Toluene tolerance, Ttg2 AMD09_RS23025 PF13466 STAS domain AMD09_RS23030 PF04333 AMD09_RS23030 AMD09_RS23035 PF14534 Domain of unknown function (DUF4440) AMD09_RS23040 PF00255 Glutathione peroxidase AMD09_RS23050 PF02646 AMD09_RS23050 AMD09_RS23055 PF08240 Alcohol dehydrogenase GroES-like domain AMD09_RS23055 PF13602 Zinc-binding dehydrogenase AMD09_RS23060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD09_RS23060 PF03466 LysR substrate binding domain AMD09_RS23070 PF13410 Glutathione S-transferase, C-terminal domain AMD09_RS23070 PF13417 Glutathione S-transferase, N-terminal domain AMD09_RS23080 PF13520 Amino acid permease AMD09_RS23085 PF07971 Glycosyl hydrolase family 92 AMD09_RS23090 PF10947 AMD09_RS23090 AMD09_RS23095 PF00990 GGDEF domain AMD09_RS23095 PF08448 PAS fold AMD09_RS23100 PF05651 AMD09_RS23100 AMD09_RS23100 PF13556 PucR C-terminal helix-turn-helix domain AMD09_RS23105 PF02595 Glycerate kinase family AMD09_RS23110 PF07690 Major Facilitator Superfamily AMD09_RS23115 PF01244 Membrane dipeptidase (Peptidase family M19) AMD09_RS23125 PF10672 S-adenosylmethionine-dependent methyltransferase AMD09_RS23130 PF03741 AMD09_RS23130 AMD09_RS23135 PF01694 Rhomboid family AMD09_RS23140 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD09_RS23145 PF00593 TonB dependent receptor AMD09_RS23145 PF07715 TonB-dependent Receptor Plug Domain AMD09_RS23150 PF01569 PAP2 superfamily AMD09_RS23155 PF01926 50S ribosome-binding GTPase AMD09_RS23155 PF10396 GTP-binding protein TrmE N-terminus AMD09_RS23155 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AMD09_RS23160 PF00656 Caspase domain AMD09_RS23160 PF01522 Polysaccharide deacetylase AMD09_RS23160 PF13432 Tetratricopeptide repeat AMD09_RS23170 PF02096 60Kd inner membrane protein AMD09_RS23170 PF14849 YidC periplasmic domain AMD09_RS23175 PF00825 Ribonuclease P AMD09_RS23180 PF00468 Ribosomal protein L34