AMD06_RS00030 PF00204 DNA gyrase B AMD06_RS00095 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD06_RS00200 PF01694 Rhomboid family AMD06_RS00220 PF04389 Peptidase family M28 AMD06_RS00360 PF00703 Glycosyl hydrolases family 2 AMD06_RS00360 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD06_RS00370 PF00331 Glycosyl hydrolase family 10 AMD06_RS00400 PF00308 Bacterial dnaA protein AMD06_RS00400 PF08299 Bacterial dnaA protein helix-turn-helix AMD06_RS00400 PF11638 DnaA N-terminal domain AMD06_RS00405 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD06_RS00405 PF02767 DNA polymerase III beta subunit, central domain AMD06_RS00405 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD06_RS00410 PF02463 RecF/RecN/SMC N terminal domain AMD06_RS00415 PF00204 DNA gyrase B AMD06_RS00415 PF00986 DNA gyrase B subunit, carboxyl terminus AMD06_RS00415 PF01751 Toprim domain AMD06_RS00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS00420 PF02517 CAAX protease self-immunity AMD06_RS00425 PF01435 Peptidase family M48 AMD06_RS00430 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) AMD06_RS00435 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS00440 PF01618 AMD06_RS00440 AMD06_RS00445 PF02472 Biopolymer transport protein ExbD/TolR AMD06_RS00450 PF02472 Biopolymer transport protein ExbD/TolR AMD06_RS00455 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD06_RS00465 PF13091 PLD-like domain AMD06_RS00480 PF04055 Radical SAM superfamily AMD06_RS00485 PF13640 2OG-Fe(II) oxygenase superfamily AMD06_RS00490 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD06_RS00495 PF01694 Rhomboid family AMD06_RS00500 PF08850 AMD06_RS00500 AMD06_RS00505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD06_RS00505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD06_RS00510 PF03572 Peptidase family S41 AMD06_RS00510 PF13180 PDZ domain AMD06_RS00515 PF01551 Peptidase family M23 AMD06_RS00525 PF04389 Peptidase family M28 AMD06_RS00530 PF13670 AMD06_RS00530 AMD06_RS00535 PF00150 Cellulase (glycosyl hydrolase family 5) AMD06_RS00540 PF00150 Cellulase (glycosyl hydrolase family 5) AMD06_RS00560 PF06877 Regulator of ribonuclease activity B AMD06_RS00565 PF08212 Lipocalin-like domain AMD06_RS00570 PF04616 Glycosyl hydrolases family 43 AMD06_RS00575 PF13347 MFS/sugar transport protein AMD06_RS00580 PF00593 TonB dependent receptor AMD06_RS00580 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS00585 PF07690 Major Facilitator Superfamily AMD06_RS00590 PF00331 Glycosyl hydrolase family 10 AMD06_RS00605 PF00331 Glycosyl hydrolase family 10 AMD06_RS00610 PF02614 Glucuronate isomerase AMD06_RS00615 PF00703 Glycosyl hydrolases family 2 AMD06_RS00615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD06_RS00615 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD06_RS00615 PF16355 AMD06_RS00615 AMD06_RS00620 PF00331 Glycosyl hydrolase family 10 AMD06_RS00625 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD06_RS00630 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD06_RS00635 PF09694 AMD06_RS00635 AMD06_RS00640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD06_RS00640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD06_RS00645 PF00596 Class II Aldolase and Adducin N-terminal domain AMD06_RS00650 PF00202 Aminotransferase class-III AMD06_RS00665 PF00171 Aldehyde dehydrogenase family AMD06_RS00670 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS00675 PF01344 Kelch motif AMD06_RS00675 PF13964 Kelch motif AMD06_RS00690 PF01232 Mannitol dehydrogenase Rossmann domain AMD06_RS00690 PF08125 Mannitol dehydrogenase C-terminal domain AMD06_RS00695 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD06_RS00695 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD06_RS00695 PF07691 PA14 domain AMD06_RS00695 PF14310 Fibronectin type III-like domain AMD06_RS00700 PF04616 Glycosyl hydrolases family 43 AMD06_RS00705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD06_RS00705 PF13378 Enolase C-terminal domain-like AMD06_RS00710 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD06_RS00710 PF03629 Domain of unknown function (DUF303) AMD06_RS00715 PF03648 Glycosyl hydrolase family 67 N-terminus AMD06_RS00715 PF07477 Glycosyl hydrolase family 67 C-terminus AMD06_RS00715 PF07488 Glycosyl hydrolase family 67 middle domain AMD06_RS00720 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS00720 PF13377 Periplasmic binding protein-like domain AMD06_RS00735 PF04381 Putative exonuclease, RdgC AMD06_RS00740 PF01863 Protein of unknown function DUF45 AMD06_RS00750 PF00561 alpha/beta hydrolase fold AMD06_RS00755 PF00762 Ferrochelatase AMD06_RS00760 PF04366 AMD06_RS00760 AMD06_RS00765 PF02416 mttA/Hcf106 family AMD06_RS00770 PF02416 mttA/Hcf106 family AMD06_RS00775 PF00902 Sec-independent protein translocase protein (TatC) AMD06_RS00785 PF00117 Glutamine amidotransferase class-I AMD06_RS00795 PF00437 Type II/IV secretion system protein AMD06_RS00795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD06_RS00800 PF02091 Glycyl-tRNA synthetase alpha subunit AMD06_RS00805 PF02092 AMD06_RS00805 AMD06_RS00805 PF05746 DALR anticodon binding domain AMD06_RS00815 PF00593 TonB dependent receptor AMD06_RS00820 PF01609 Transposase DDE domain AMD06_RS00830 PF01103 Surface antigen AMD06_RS00830 PF07244 Surface antigen variable number repeat AMD06_RS00835 PF04357 AMD06_RS00835 AMD06_RS00855 PF13360 PQQ-like domain AMD06_RS00860 PF01202 Shikimate kinase AMD06_RS00865 PF13347 MFS/sugar transport protein AMD06_RS00870 PF06165 Glycosyltransferase family 36 AMD06_RS00870 PF17167 AMD06_RS00870 AMD06_RS00875 PF15979 AMD06_RS00875 AMD06_RS00885 PF00072 Response regulator receiver domain AMD06_RS00885 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS00885 PF12860 AMD06_RS00885 AMD06_RS00890 PF02659 AMD06_RS00890 AMD06_RS00895 PF01614 Bacterial transcriptional regulator AMD06_RS00895 PF09339 IclR helix-turn-helix domain AMD06_RS00900 PF07690 Major Facilitator Superfamily AMD06_RS00905 PF05336 Domain of unknown function (DUF718) AMD06_RS00915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD06_RS00915 PF13378 Enolase C-terminal domain-like AMD06_RS00920 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD06_RS00925 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS00930 PF04909 Amidohydrolase AMD06_RS00935 PF00248 Aldo/keto reductase family AMD06_RS00945 PF04616 Glycosyl hydrolases family 43 AMD06_RS00955 PF00578 AhpC/TSA family AMD06_RS00965 PF14415 Domain of unknown function (DUF4424) AMD06_RS00970 PF00072 Response regulator receiver domain AMD06_RS00970 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS00975 PF00501 AMP-binding enzyme AMD06_RS00975 PF13193 AMP-binding enzyme C-terminal domain AMD06_RS00975 PF16177 AMD06_RS00975 AMD06_RS00985 PF04341 AMD06_RS00985 AMD06_RS00990 PF00474 Sodium:solute symporter family AMD06_RS00995 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD06_RS01000 PF13616 PPIC-type PPIASE domain AMD06_RS01010 PF00480 ROK family AMD06_RS01015 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS01020 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD06_RS01025 PF04226 AMD06_RS01025 AMD06_RS01035 PF01648 4'-phosphopantetheinyl transferase superfamily AMD06_RS01040 PF09423 PhoD-like phosphatase AMD06_RS01040 PF16655 AMD06_RS01040 AMD06_RS01045 PF09423 PhoD-like phosphatase AMD06_RS01045 PF16655 AMD06_RS01045 AMD06_RS01050 PF02527 rRNA small subunit methyltransferase G AMD06_RS01055 PF05960 Bacterial protein of unknown function (DUF885) AMD06_RS01065 PF02321 Outer membrane efflux protein AMD06_RS01070 PF16576 AMD06_RS01070 AMD06_RS01075 PF00873 AcrB/AcrD/AcrF family AMD06_RS01080 PF00830 Ribosomal L28 family AMD06_RS01085 PF00471 Ribosomal protein L33 AMD06_RS01090 PF04909 Amidohydrolase AMD06_RS01095 PF04303 PrpF protein AMD06_RS01100 PF03737 Demethylmenaquinone methyltransferase AMD06_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS01105 PF03466 LysR substrate binding domain AMD06_RS01110 PF13091 PLD-like domain AMD06_RS01110 PF13396 AMD06_RS01110 AMD06_RS01120 PF13454 FAD-NAD(P)-binding AMD06_RS01125 PF00580 UvrD/REP helicase N-terminal domain AMD06_RS01125 PF13361 UvrD-like helicase C-terminal domain AMD06_RS01130 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS01130 PF12464 Maltose acetyltransferase AMD06_RS01135 PF00582 Universal stress protein family AMD06_RS01140 PF12833 Helix-turn-helix domain AMD06_RS01145 PF05591 AMD06_RS01145 AMD06_RS01150 PF05943 AMD06_RS01150 AMD06_RS01155 PF05638 Protein of unknown function (DUF796) AMD06_RS01160 PF07024 ImpE protein AMD06_RS01165 PF04965 Gene 25-like lysozyme AMD06_RS01170 PF05947 AMD06_RS01170 AMD06_RS01175 PF06996 AMD06_RS01175 AMD06_RS01180 PF00004 ATPase family associated with various cellular activities (AAA) AMD06_RS01180 PF07724 AAA domain (Cdc48 subfamily) AMD06_RS01180 PF10431 C-terminal, D2-small domain, of ClpB protein AMD06_RS01205 PF01419 Jacalin-like lectin domain AMD06_RS01210 PF00328 Histidine phosphatase superfamily (branch 2) AMD06_RS01215 PF00593 TonB dependent receptor AMD06_RS01215 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS01220 PF04773 FecR protein AMD06_RS01220 PF16220 AMD06_RS01220 AMD06_RS01220 PF16344 AMD06_RS01220 AMD06_RS01225 PF04542 Sigma-70 region 2 AMD06_RS01225 PF08281 Sigma-70, region 4 AMD06_RS01230 PF07638 ECF sigma factor AMD06_RS01235 PF00069 Protein kinase domain AMD06_RS01235 PF13374 Tetratricopeptide repeat AMD06_RS01235 PF13424 Tetratricopeptide repeat AMD06_RS01240 PF05488 PAAR motif AMD06_RS01245 PF00515 Tetratricopeptide repeat AMD06_RS01245 PF13489 Methyltransferase domain AMD06_RS01250 PF05954 Phage late control gene D protein (GPD) AMD06_RS01260 PF00498 FHA domain AMD06_RS01265 PF05936 AMD06_RS01265 AMD06_RS01270 PF00691 OmpA family AMD06_RS01270 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AMD06_RS01275 PF06744 AMD06_RS01275 AMD06_RS01275 PF06761 AMD06_RS01275 AMD06_RS01275 PF14331 AMD06_RS01275 AMD06_RS01280 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) AMD06_RS01285 PF13672 Protein phosphatase 2C AMD06_RS01290 PF00069 Protein kinase domain AMD06_RS01290 PF03781 Sulfatase-modifying factor enzyme 1 AMD06_RS01300 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD06_RS01300 PF08479 POTRA domain, ShlB-type AMD06_RS01305 PF05860 haemagglutination activity domain AMD06_RS01310 PF06812 AMD06_RS01310 AMD06_RS01315 PF11191 Protein of unknown function (DUF2782) AMD06_RS01320 PF00476 DNA polymerase family A AMD06_RS01320 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD06_RS01320 PF01612 3'-5' exonuclease AMD06_RS01320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD06_RS01325 PF01218 Coproporphyrinogen III oxidase AMD06_RS01340 PF00326 Prolyl oligopeptidase family AMD06_RS01340 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD06_RS01345 PF00501 AMP-binding enzyme AMD06_RS01360 PF04820 Tryptophan halogenase AMD06_RS01365 PF00550 Phosphopantetheine attachment site AMD06_RS01375 PF01553 Acyltransferase AMD06_RS01380 PF07977 FabA-like domain AMD06_RS01385 PF03279 AMD06_RS01385 AMD06_RS01400 PF03176 MMPL family AMD06_RS01415 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS01425 PF04820 Tryptophan halogenase AMD06_RS01425 PF13450 NAD(P)-binding Rossmann-like domain AMD06_RS01430 PF00535 Glycosyl transferase family 2 AMD06_RS01435 PF13723 AMD06_RS01435 AMD06_RS01440 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD06_RS01440 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD06_RS01445 PF05166 YcgL domain AMD06_RS01450 PF00023 Ankyrin repeat AMD06_RS01450 PF12796 Ankyrin repeats (3 copies) AMD06_RS01460 PF00723 Glycosyl hydrolases family 15 AMD06_RS01465 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD06_RS01465 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD06_RS01470 PF00999 Sodium/hydrogen exchanger family AMD06_RS01470 PF02254 TrkA-N domain AMD06_RS01475 PF00194 Eukaryotic-type carbonic anhydrase AMD06_RS01480 PF00571 CBS domain AMD06_RS01480 PF01769 Divalent cation transporter AMD06_RS01480 PF03448 MgtE intracellular N domain AMD06_RS01485 PF13302 Acetyltransferase (GNAT) domain AMD06_RS01485 PF13380 CoA binding domain AMD06_RS01485 PF13549 ATP-grasp domain AMD06_RS01485 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD06_RS01490 PF04332 AMD06_RS01490 AMD06_RS01495 PF00317 Ribonucleotide reductase, all-alpha domain AMD06_RS01495 PF02867 Ribonucleotide reductase, barrel domain AMD06_RS01500 PF00268 Ribonucleotide reductase, small chain AMD06_RS01505 PF00258 Flavodoxin AMD06_RS01510 PF00085 Thioredoxin AMD06_RS01520 PF03061 Thioesterase superfamily AMD06_RS01530 PF02558 Ketopantoate reductase PanE/ApbA AMD06_RS01530 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD06_RS01535 PF12686 AMD06_RS01535 AMD06_RS01540 PF01061 AMD06_RS01540 AMD06_RS01545 PF00005 ABC transporter AMD06_RS01550 PF00175 Oxidoreductase NAD-binding domain AMD06_RS01550 PF00970 Oxidoreductase FAD-binding domain AMD06_RS01555 PF01965 DJ-1/PfpI family AMD06_RS01555 PF12833 Helix-turn-helix domain AMD06_RS01560 PF11287 AMD06_RS01560 AMD06_RS01565 PF00593 TonB dependent receptor AMD06_RS01565 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS01575 PF01545 Cation efflux family AMD06_RS01580 PF02583 Metal-sensitive transcriptional repressor AMD06_RS01585 PF01229 Glycosyl hydrolases family 39 AMD06_RS01595 PF01381 Helix-turn-helix AMD06_RS01600 PF00561 alpha/beta hydrolase fold AMD06_RS01600 PF08386 TAP-like protein AMD06_RS01605 PF00005 ABC transporter AMD06_RS01610 PF12679 AMD06_RS01610 AMD06_RS01615 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS01620 PF04820 Tryptophan halogenase AMD06_RS01625 PF13621 Cupin-like domain AMD06_RS01630 PF07277 AMD06_RS01630 AMD06_RS01635 PF00593 TonB dependent receptor AMD06_RS01635 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS01645 PF00043 Glutathione S-transferase, C-terminal domain AMD06_RS01645 PF02798 Glutathione S-transferase, N-terminal domain AMD06_RS01650 PF00326 Prolyl oligopeptidase family AMD06_RS01650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD06_RS01655 PF05960 Bacterial protein of unknown function (DUF885) AMD06_RS01675 PF00490 Delta-aminolevulinic acid dehydratase AMD06_RS01680 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS01685 PF03466 LysR substrate binding domain AMD06_RS01690 PF01223 DNA/RNA non-specific endonuclease AMD06_RS01695 PF00175 Oxidoreductase NAD-binding domain AMD06_RS01695 PF00258 Flavodoxin AMD06_RS01695 PF03929 AMD06_RS01695 AMD06_RS01700 PF07676 WD40-like Beta Propeller Repeat AMD06_RS01705 PF01488 Shikimate / quinate 5-dehydrogenase AMD06_RS01705 PF08501 Shikimate dehydrogenase substrate binding domain AMD06_RS01720 PF13307 Helicase C-terminal domain AMD06_RS01725 PF00199 Catalase AMD06_RS01725 PF06628 Catalase-related immune-responsive AMD06_RS01730 PF12796 Ankyrin repeats (3 copies) AMD06_RS01740 PF01207 Dihydrouridine synthase (Dus) AMD06_RS01750 PF00072 Response regulator receiver domain AMD06_RS01750 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS01760 PF08811 AMD06_RS01760 AMD06_RS01765 PF07394 AMD06_RS01765 AMD06_RS01770 PF06167 Glucose-regulated metallo-peptidase M90 AMD06_RS01780 PF02237 Biotin protein ligase C terminal domain AMD06_RS01780 PF03099 Biotin/lipoate A/B protein ligase family AMD06_RS01780 PF08279 HTH domain AMD06_RS01785 PF03309 Type III pantothenate kinase AMD06_RS01790 PF05036 Sporulation related domain AMD06_RS01800 PF02223 Thymidylate kinase AMD06_RS01820 PF03259 Roadblock/LC7 domain AMD06_RS01825 PF00491 Arginase family AMD06_RS01830 PF08085 AMD06_RS01830 AMD06_RS01835 PF08085 AMD06_RS01835 AMD06_RS01840 PF05532 CsbD-like AMD06_RS01845 PF00579 tRNA synthetases class I (W and Y) AMD06_RS01845 PF07411 Domain of unknown function (DUF1508) AMD06_RS01850 PF00753 Metallo-beta-lactamase superfamily AMD06_RS01855 PF02225 PA domain AMD06_RS01855 PF04389 Peptidase family M28 AMD06_RS01865 PF00892 EamA-like transporter family AMD06_RS01870 PF00892 EamA-like transporter family AMD06_RS01875 PF12697 Alpha/beta hydrolase family AMD06_RS01880 PF02687 AMD06_RS01880 AMD06_RS01880 PF12704 MacB-like periplasmic core domain AMD06_RS01885 PF02687 AMD06_RS01885 AMD06_RS01885 PF12704 MacB-like periplasmic core domain AMD06_RS01890 PF00005 ABC transporter AMD06_RS01895 PF16576 AMD06_RS01895 AMD06_RS01900 PF07730 Histidine kinase AMD06_RS01905 PF00072 Response regulator receiver domain AMD06_RS01905 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS01910 PF06283 Trehalose utilisation AMD06_RS01915 PF01292 Prokaryotic cytochrome b561 AMD06_RS01920 PF00199 Catalase AMD06_RS01925 PF04542 Sigma-70 region 2 AMD06_RS01925 PF08281 Sigma-70, region 4 AMD06_RS01935 PF00883 Cytosol aminopeptidase family, catalytic domain AMD06_RS01940 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS01945 PF01594 AMD06_RS01945 AMD06_RS01965 PF13180 PDZ domain AMD06_RS01965 PF13365 Trypsin-like peptidase domain AMD06_RS01975 PF11769 AMD06_RS01975 AMD06_RS01985 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS01985 PF00672 HAMP domain AMD06_RS01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS01990 PF00072 Response regulator receiver domain AMD06_RS01990 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS01995 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS01995 PF08338 Domain of unknown function (DUF1731) AMD06_RS02000 PF13628 AMD06_RS02000 AMD06_RS02020 PF11379 AMD06_RS02020 AMD06_RS02025 PF00326 Prolyl oligopeptidase family AMD06_RS02035 PF01139 tRNA-splicing ligase RtcB AMD06_RS02040 PF01145 SPFH domain / Band 7 family AMD06_RS02055 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS02060 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD06_RS02060 PF00175 Oxidoreductase NAD-binding domain AMD06_RS02060 PF00970 Oxidoreductase FAD-binding domain AMD06_RS02065 PF00487 AMD06_RS02065 AMD06_RS02070 PF00563 EAL domain AMD06_RS02070 PF12792 AMD06_RS02070 AMD06_RS02080 PF08212 Lipocalin-like domain AMD06_RS02085 PF01078 Magnesium chelatase, subunit ChlI AMD06_RS02085 PF13335 AMD06_RS02085 AMD06_RS02085 PF13541 Subunit ChlI of Mg-chelatase AMD06_RS02090 PF04380 AMD06_RS02090 AMD06_RS02095 PF00543 Nitrogen regulatory protein P-II AMD06_RS02100 PF02838 Glycosyl hydrolase family 20, domain 2 AMD06_RS02100 PF07555 beta-N-acetylglucosaminidase AMD06_RS02110 PF13505 Outer membrane protein beta-barrel domain AMD06_RS02120 PF09851 AMD06_RS02120 AMD06_RS02120 PF14470 Bacterial PH domain AMD06_RS02125 PF01564 Spermine/spermidine synthase AMD06_RS02130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD06_RS02130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD06_RS02140 PF00501 AMP-binding enzyme AMD06_RS02140 PF00550 Phosphopantetheine attachment site AMD06_RS02140 PF00668 Condensation domain AMD06_RS02140 PF00975 Thioesterase domain AMD06_RS02140 PF13193 AMP-binding enzyme C-terminal domain AMD06_RS02145 PF03033 Glycosyltransferase family 28 N-terminal domain AMD06_RS02150 PF01757 AMD06_RS02150 AMD06_RS02155 PF00106 short chain dehydrogenase AMD06_RS02165 PF05036 Sporulation related domain AMD06_RS02170 PF00750 tRNA synthetases class I (R) AMD06_RS02170 PF03485 Arginyl tRNA synthetase N terminal domain AMD06_RS02170 PF05746 DALR anticodon binding domain AMD06_RS02175 PF04002 RadC-like JAB domain AMD06_RS02180 PF02441 Flavoprotein AMD06_RS02180 PF04127 DNA / pantothenate metabolism flavoprotein AMD06_RS02185 PF00692 dUTPase AMD06_RS02190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD06_RS02190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD06_RS02190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD06_RS02190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD06_RS02200 PF07578 Lipid A Biosynthesis N-terminal domain AMD06_RS02205 PF00535 Glycosyl transferase family 2 AMD06_RS02210 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS02215 PF11731 AMD06_RS02215 AMD06_RS02220 PF02195 ParB-like nuclease domain AMD06_RS02225 PF13614 AAA domain AMD06_RS02235 PF00156 Phosphoribosyl transferase domain AMD06_RS02240 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS02245 PF07690 Major Facilitator Superfamily AMD06_RS02255 PF03702 Uncharacterised protein family (UPF0075) AMD06_RS02260 PF01551 Peptidase family M23 AMD06_RS02260 PF04225 Opacity-associated protein A LysM-like domain AMD06_RS02265 PF00579 tRNA synthetases class I (W and Y) AMD06_RS02295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD06_RS02295 PF06827 Zinc finger found in FPG and IleRS AMD06_RS02295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD06_RS02300 PF14315 AMD06_RS02300 AMD06_RS02305 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD06_RS02310 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS02310 PF01590 GAF domain AMD06_RS02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS02315 PF00265 Thymidine kinase AMD06_RS02320 PF00580 UvrD/REP helicase N-terminal domain AMD06_RS02320 PF13361 UvrD-like helicase C-terminal domain AMD06_RS02325 PF13302 Acetyltransferase (GNAT) domain AMD06_RS02330 PF14094 AMD06_RS02330 AMD06_RS02340 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD06_RS02345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD06_RS02350 PF04820 Tryptophan halogenase AMD06_RS02365 PF13620 Carboxypeptidase regulatory-like domain AMD06_RS02370 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS02370 PF13377 Periplasmic binding protein-like domain AMD06_RS02380 PF01553 Acyltransferase AMD06_RS02385 PF00107 Zinc-binding dehydrogenase AMD06_RS02385 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS02390 PF04325 Protein of unknown function (DUF465) AMD06_RS02400 PF00665 Integrase core domain AMD06_RS02400 PF13936 Helix-turn-helix domain AMD06_RS02405 PF01695 IstB-like ATP binding protein AMD06_RS02410 PF00150 Cellulase (glycosyl hydrolase family 5) AMD06_RS02415 PF00107 Zinc-binding dehydrogenase AMD06_RS02415 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS02420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS02420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD06_RS02425 PF00310 Glutamine amidotransferases class-II AMD06_RS02425 PF01493 GXGXG motif AMD06_RS02425 PF01645 Conserved region in glutamate synthase AMD06_RS02425 PF04898 Glutamate synthase central domain AMD06_RS02430 PF11720 Peptidase inhibitor I78 family AMD06_RS02435 PF01028 Eukaryotic DNA topoisomerase I, catalytic core AMD06_RS02450 PF05368 NmrA-like family AMD06_RS02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS02455 PF03466 LysR substrate binding domain AMD06_RS02460 PF00534 Glycosyl transferases group 1 AMD06_RS02460 PF13439 Glycosyltransferase Family 4 AMD06_RS02465 PF00534 Glycosyl transferases group 1 AMD06_RS02465 PF13439 Glycosyltransferase Family 4 AMD06_RS02470 PF13727 CoA-binding domain AMD06_RS02475 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD06_RS02480 PF04932 AMD06_RS02480 AMD06_RS02485 PF03808 AMD06_RS02485 AMD06_RS02490 PF13439 Glycosyltransferase Family 4 AMD06_RS02490 PF13692 Glycosyl transferases group 1 AMD06_RS02505 PF13489 Methyltransferase domain AMD06_RS02520 PF05711 Macrocin-O-methyltransferase (TylF) AMD06_RS02525 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS02535 PF01943 AMD06_RS02535 AMD06_RS02535 PF14667 Polysaccharide biosynthesis C-terminal domain AMD06_RS02540 PF00005 ABC transporter AMD06_RS02540 PF00664 ABC transporter transmembrane region AMD06_RS02545 PF13471 AMD06_RS02545 AMD06_RS02560 PF13847 Methyltransferase domain AMD06_RS02565 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD06_RS02575 PF00685 Sulfotransferase domain AMD06_RS02580 PF13673 Acetyltransferase (GNAT) domain AMD06_RS02585 PF07484 Phage Tail Collar Domain AMD06_RS02590 PF07484 Phage Tail Collar Domain AMD06_RS02595 PF07484 Phage Tail Collar Domain AMD06_RS02600 PF14907 Uncharacterised nucleotidyltransferase AMD06_RS02605 PF03965 Penicillinase repressor AMD06_RS02610 PF05569 BlaR1 peptidase M56 AMD06_RS02625 PF03435 Saccharopine dehydrogenase AMD06_RS02630 PF08975 Domain of unknown function (DUF1868) AMD06_RS02635 PF00593 TonB dependent receptor AMD06_RS02635 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS02640 PF00480 ROK family AMD06_RS02645 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD06_RS02650 PF13482 RNase_H superfamily AMD06_RS02655 PF00270 DEAD/DEAH box helicase AMD06_RS02655 PF00271 Helicase conserved C-terminal domain AMD06_RS02655 PF09369 AMD06_RS02655 AMD06_RS02660 PF03006 AMD06_RS02660 AMD06_RS02665 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD06_RS02670 PF05016 Plasmid stabilisation system protein AMD06_RS02675 PF00106 short chain dehydrogenase AMD06_RS02680 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS02685 PF03466 LysR substrate binding domain AMD06_RS02690 PF14305 AMD06_RS02690 AMD06_RS02700 PF02525 Flavodoxin-like fold AMD06_RS02705 PF01527 Transposase AMD06_RS02715 PF13333 AMD06_RS02715 AMD06_RS02725 PF01609 Transposase DDE domain AMD06_RS02760 PF05532 CsbD-like AMD06_RS02765 PF08668 HDOD domain AMD06_RS02770 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD06_RS02780 PF01447 Thermolysin metallopeptidase, catalytic domain AMD06_RS02780 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD06_RS02785 PF13460 NADH(P)-binding AMD06_RS02790 PF00293 NUDIX domain AMD06_RS02795 PF01435 Peptidase family M48 AMD06_RS02805 PF10116 AMD06_RS02805 AMD06_RS02810 PF00085 Thioredoxin AMD06_RS02820 PF00083 Sugar (and other) transporter AMD06_RS02825 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD06_RS02830 PF12787 AMD06_RS02830 AMD06_RS02835 PF06080 AMD06_RS02835 AMD06_RS02850 PF07584 AMD06_RS02850 AMD06_RS02855 PF01882 AMD06_RS02855 AMD06_RS02860 PF07726 ATPase family associated with various cellular activities (AAA) AMD06_RS02865 PF13709 Domain of unknown function (DUF4159) AMD06_RS02870 PF01523 Putative modulator of DNA gyrase AMD06_RS02875 PF01523 Putative modulator of DNA gyrase AMD06_RS02880 PF01523 Putative modulator of DNA gyrase AMD06_RS02890 PF00316 Fructose-1-6-bisphosphatase AMD06_RS02895 PF00155 Aminotransferase class I and II AMD06_RS02900 PF00593 TonB dependent receptor AMD06_RS02900 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS02910 PF07883 Cupin domain AMD06_RS02915 PF00171 Aldehyde dehydrogenase family AMD06_RS02920 PF05610 AMD06_RS02920 AMD06_RS02935 PF02735 Ku70/Ku80 beta-barrel domain AMD06_RS02940 PF01070 FMN-dependent dehydrogenase AMD06_RS02950 PF00144 Beta-lactamase AMD06_RS02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS02955 PF07730 Histidine kinase AMD06_RS02960 PF00072 Response regulator receiver domain AMD06_RS02960 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS02980 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS02980 PF13191 AAA ATPase domain AMD06_RS02985 PF07055 Enoyl reductase FAD binding domain AMD06_RS02985 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD06_RS02985 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD06_RS02995 PF00294 pfkB family carbohydrate kinase AMD06_RS03000 PF00593 TonB dependent receptor AMD06_RS03000 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS03005 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD06_RS03020 PF13619 AMD06_RS03020 AMD06_RS03025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMD06_RS03050 PF01527 Transposase AMD06_RS03055 PF00665 Integrase core domain AMD06_RS03055 PF13276 AMD06_RS03055 AMD06_RS03060 PF00128 Alpha amylase, catalytic domain AMD06_RS03060 PF11896 Domain of unknown function (DUF3416) AMD06_RS03065 PF00128 Alpha amylase, catalytic domain AMD06_RS03065 PF16657 AMD06_RS03065 AMD06_RS03070 PF00128 Alpha amylase, catalytic domain AMD06_RS03070 PF02806 Alpha amylase, C-terminal all-beta domain AMD06_RS03070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD06_RS03075 PF12850 Calcineurin-like phosphoesterase superfamily domain AMD06_RS03080 PF00248 Aldo/keto reductase family AMD06_RS03085 PF00135 Carboxylesterase family AMD06_RS03090 PF07859 alpha/beta hydrolase fold AMD06_RS03100 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD06_RS03105 PF04290 AMD06_RS03105 AMD06_RS03110 PF06808 AMD06_RS03110 AMD06_RS03115 PF04616 Glycosyl hydrolases family 43 AMD06_RS03120 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS03120 PF13377 Periplasmic binding protein-like domain AMD06_RS03125 PF04962 KduI/IolB family AMD06_RS03130 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS03135 PF02502 Ribose/Galactose Isomerase AMD06_RS03135 PF12408 Ribose-5-phosphate isomerase AMD06_RS03140 PF07883 Cupin domain AMD06_RS03140 PF13472 GDSL-like Lipase/Acylhydrolase family AMD06_RS03150 PF14300 Domain of unknown function (DUF4375) AMD06_RS03155 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD06_RS03160 PF01037 AsnC family AMD06_RS03160 PF13404 AsnC-type helix-turn-helix domain AMD06_RS03165 PF00593 TonB dependent receptor AMD06_RS03165 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS03170 PF01734 Patatin-like phospholipase AMD06_RS03175 PF01987 Mitochondrial biogenesis AIM24 AMD06_RS03180 PF00005 ABC transporter AMD06_RS03185 PF00487 AMD06_RS03185 AMD06_RS03190 PF13202 EF hand AMD06_RS03195 PF00005 ABC transporter AMD06_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS03200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMD06_RS03205 PF00266 Aminotransferase class-V AMD06_RS03210 PF03781 Sulfatase-modifying factor enzyme 1 AMD06_RS03210 PF12867 DinB superfamily AMD06_RS03215 PF10017 AMD06_RS03215 AMD06_RS03220 PF11625 Protein of unknown function (DUF3253) AMD06_RS03225 PF07805 HipA-like N-terminal domain AMD06_RS03225 PF13657 HipA N-terminal domain AMD06_RS03230 PF13560 Helix-turn-helix domain AMD06_RS03235 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMD06_RS03245 PF03547 AMD06_RS03245 AMD06_RS03255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD06_RS03260 PF00300 Histidine phosphatase superfamily (branch 1) AMD06_RS03265 PF04264 YceI-like domain AMD06_RS03270 PF13091 PLD-like domain AMD06_RS03275 PF03061 Thioesterase superfamily AMD06_RS03280 PF01553 Acyltransferase AMD06_RS03285 PF12146 Putative lysophospholipase AMD06_RS03295 PF13432 Tetratricopeptide repeat AMD06_RS03300 PF01161 Phosphatidylethanolamine-binding protein AMD06_RS03305 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS03310 PF03724 META domain AMD06_RS03310 PF14302 AMD06_RS03310 AMD06_RS03315 PF02673 AMD06_RS03315 AMD06_RS03320 PF00120 Glutamine synthetase, catalytic domain AMD06_RS03320 PF03951 Glutamine synthetase, beta-Grasp domain AMD06_RS03325 PF00543 Nitrogen regulatory protein P-II AMD06_RS03330 PF00909 Ammonium Transporter Family AMD06_RS03335 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS03340 PF00072 Response regulator receiver domain AMD06_RS03340 PF00158 Sigma-54 interaction domain AMD06_RS03340 PF02954 Bacterial regulatory protein, Fis family AMD06_RS03345 PF00080 Copper/zinc superoxide dismutase (SODC) AMD06_RS03350 PF00080 Copper/zinc superoxide dismutase (SODC) AMD06_RS03365 PF00108 Thiolase, N-terminal domain AMD06_RS03365 PF02803 Thiolase, C-terminal domain AMD06_RS03370 PF07219 AMD06_RS03370 AMD06_RS03375 PF04375 AMD06_RS03375 AMD06_RS03380 PF02602 Uroporphyrinogen-III synthase HemD AMD06_RS03385 PF01755 AMD06_RS03385 AMD06_RS03390 PF09500 Putative thioesterase (yiiD_Cterm) AMD06_RS03400 PF00581 Rhodanese-like domain AMD06_RS03405 PF02556 Preprotein translocase subunit SecB AMD06_RS03410 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD06_RS03410 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD06_RS03415 PF13505 Outer membrane protein beta-barrel domain AMD06_RS03420 PF00205 Thiamine pyrophosphate enzyme, central domain AMD06_RS03420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD06_RS03420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD06_RS03425 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS03430 PF00072 Response regulator receiver domain AMD06_RS03430 PF00158 Sigma-54 interaction domain AMD06_RS03430 PF02954 Bacterial regulatory protein, Fis family AMD06_RS03445 PF07690 Major Facilitator Superfamily AMD06_RS03450 PF00588 SpoU rRNA Methylase family AMD06_RS03460 PF13698 AMD06_RS03460 AMD06_RS03465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD06_RS03465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD06_RS03475 PF00561 alpha/beta hydrolase fold AMD06_RS03480 PF03692 AMD06_RS03480 AMD06_RS03485 PF00501 AMP-binding enzyme AMD06_RS03490 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD06_RS03495 PF07043 AMD06_RS03495 AMD06_RS03505 PF01820 D-ala D-ala ligase N-terminus AMD06_RS03510 PF02036 SCP-2 sterol transfer family AMD06_RS03515 PF03109 AMD06_RS03515 AMD06_RS03520 PF07883 Cupin domain AMD06_RS03525 PF00849 RNA pseudouridylate synthase AMD06_RS03530 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) AMD06_RS03535 PF00472 RF-1 domain AMD06_RS03540 PF01553 Acyltransferase AMD06_RS03545 PF01112 Asparaginase AMD06_RS03550 PF01432 Peptidase family M3 AMD06_RS03555 PF12706 Beta-lactamase superfamily domain AMD06_RS03565 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS03565 PF14246 AefR-like transcriptional repressor, C-terminal region AMD06_RS03570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS03575 PF12833 Helix-turn-helix domain AMD06_RS03580 PF00999 Sodium/hydrogen exchanger family AMD06_RS03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS03585 PF03466 LysR substrate binding domain AMD06_RS03590 PF01274 Malate synthase AMD06_RS03600 PF00027 Cyclic nucleotide-binding domain AMD06_RS03600 PF00990 GGDEF domain AMD06_RS03605 PF13174 Tetratricopeptide repeat AMD06_RS03605 PF14559 Tetratricopeptide repeat AMD06_RS03615 PF00881 Nitroreductase family AMD06_RS03620 PF00326 Prolyl oligopeptidase family AMD06_RS03625 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD06_RS03625 PF00364 Biotin-requiring enzyme AMD06_RS03625 PF02785 Biotin carboxylase C-terminal domain AMD06_RS03625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD06_RS03630 PF01039 Carboxyl transferase domain AMD06_RS03635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS03635 PF02770 Acyl-CoA dehydrogenase, middle domain AMD06_RS03635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD06_RS03640 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS03650 PF08808 AMD06_RS03650 AMD06_RS03655 PF11804 AMD06_RS03655 AMD06_RS03660 PF03929 AMD06_RS03660 AMD06_RS03665 PF12365 AMD06_RS03665 AMD06_RS03675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD06_RS03680 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS03685 PF03203 AMD06_RS03685 AMD06_RS03690 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD06_RS03690 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD06_RS03710 PF12146 Putative lysophospholipase AMD06_RS03715 PF03969 AFG1-like ATPase AMD06_RS03720 PF01047 MarR family AMD06_RS03725 PF02566 OsmC-like protein AMD06_RS03735 PF12697 Alpha/beta hydrolase family AMD06_RS03740 PF11101 AMD06_RS03740 AMD06_RS03755 PF00107 Zinc-binding dehydrogenase AMD06_RS03755 PF16884 AMD06_RS03755 AMD06_RS03760 PF00248 Aldo/keto reductase family AMD06_RS03770 PF00849 RNA pseudouridylate synthase AMD06_RS03785 PF00271 Helicase conserved C-terminal domain AMD06_RS03785 PF04408 Helicase associated domain (HA2) AMD06_RS03785 PF08482 AMD06_RS03785 AMD06_RS03795 PF07308 AMD06_RS03795 AMD06_RS03800 PF00576 HIUase/Transthyretin family AMD06_RS03805 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS03810 PF09349 OHCU decarboxylase AMD06_RS03815 PF11533 Protein of unknown function (DUF3225) AMD06_RS03820 PF01522 Polysaccharide deacetylase AMD06_RS03825 PF00266 Aminotransferase class-V AMD06_RS03830 PF01546 Peptidase family M20/M25/M40 AMD06_RS03830 PF07687 Peptidase dimerisation domain AMD06_RS03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS03835 PF03466 LysR substrate binding domain AMD06_RS03840 PF07690 Major Facilitator Superfamily AMD06_RS03850 PF01019 Gamma-glutamyltranspeptidase AMD06_RS03855 PF01425 Amidase AMD06_RS03860 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD06_RS03865 PF00962 Adenosine/AMP deaminase AMD06_RS03870 PF00860 Permease family AMD06_RS03880 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD06_RS03880 PF00970 Oxidoreductase FAD-binding domain AMD06_RS03885 PF00355 Rieske [2Fe-2S] domain AMD06_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS03890 PF03466 LysR substrate binding domain AMD06_RS03895 PF01026 TatD related DNase AMD06_RS03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS03910 PF03466 LysR substrate binding domain AMD06_RS03915 PF07690 Major Facilitator Superfamily AMD06_RS03920 PF13411 MerR HTH family regulatory protein AMD06_RS03925 PF12697 Alpha/beta hydrolase family AMD06_RS03930 PF02146 Sir2 family AMD06_RS03935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD06_RS03940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD06_RS03940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD06_RS03950 PF00551 Formyl transferase AMD06_RS03950 PF01842 ACT domain AMD06_RS03955 PF00072 Response regulator receiver domain AMD06_RS03955 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS03960 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS03960 PF00672 HAMP domain AMD06_RS03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS03965 PF16576 AMD06_RS03965 AMD06_RS03970 PF00873 AcrB/AcrD/AcrF family AMD06_RS03975 PF02321 Outer membrane efflux protein AMD06_RS03985 PF02219 Methylenetetrahydrofolate reductase AMD06_RS03990 PF02677 AMD06_RS03990 AMD06_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS03995 PF03466 LysR substrate binding domain AMD06_RS04000 PF03358 NADPH-dependent FMN reductase AMD06_RS04005 PF08908 AMD06_RS04005 AMD06_RS04010 PF01717 Cobalamin-independent synthase, Catalytic domain AMD06_RS04015 PF03812 AMD06_RS04015 AMD06_RS04020 PF07396 Phosphate-selective porin O and P AMD06_RS04025 PF05368 NmrA-like family AMD06_RS04030 PF01638 HxlR-like helix-turn-helix AMD06_RS04055 PF00665 Integrase core domain AMD06_RS04055 PF13276 AMD06_RS04055 AMD06_RS04060 PF01527 Transposase AMD06_RS04065 PF00589 Phage integrase family AMD06_RS04070 PF00920 Dehydratase family AMD06_RS04075 PF00150 Cellulase (glycosyl hydrolase family 5) AMD06_RS04090 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS04100 PF07690 Major Facilitator Superfamily AMD06_RS04105 PF11871 AMD06_RS04105 AMD06_RS04105 PF13487 HD domain AMD06_RS04110 PF12802 MarR family AMD06_RS04115 PF13557 AMD06_RS04115 AMD06_RS04120 PF00106 short chain dehydrogenase AMD06_RS04120 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS04125 PF00171 Aldehyde dehydrogenase family AMD06_RS04130 PF02311 AraC-like ligand binding domain AMD06_RS04130 PF12833 Helix-turn-helix domain AMD06_RS04135 PF01494 FAD binding domain AMD06_RS04140 PF12680 SnoaL-like domain AMD06_RS04145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD06_RS04145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD06_RS04150 PF00230 Major intrinsic protein AMD06_RS04155 PF01266 FAD dependent oxidoreductase AMD06_RS04155 PF16901 AMD06_RS04155 AMD06_RS04160 PF00455 AMD06_RS04160 AMD06_RS04160 PF08220 DeoR-like helix-turn-helix domain AMD06_RS04165 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD06_RS04165 PF00175 Oxidoreductase NAD-binding domain AMD06_RS04165 PF00970 Oxidoreductase FAD-binding domain AMD06_RS04170 PF00355 Rieske [2Fe-2S] domain AMD06_RS04175 PF01144 Coenzyme A transferase AMD06_RS04180 PF01144 Coenzyme A transferase AMD06_RS04185 PF00108 Thiolase, N-terminal domain AMD06_RS04185 PF02803 Thiolase, C-terminal domain AMD06_RS04190 PF00775 Dioxygenase AMD06_RS04190 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD06_RS04195 PF00775 Dioxygenase AMD06_RS04200 PF00206 Lyase AMD06_RS04200 PF10397 Adenylosuccinate lyase C-terminus AMD06_RS04205 PF00561 alpha/beta hydrolase fold AMD06_RS04210 PF02627 Carboxymuconolactone decarboxylase family AMD06_RS04215 PF12146 Putative lysophospholipase AMD06_RS04220 PF01614 Bacterial transcriptional regulator AMD06_RS04220 PF09339 IclR helix-turn-helix domain AMD06_RS04225 PF01163 RIO1 family AMD06_RS04230 PF07859 alpha/beta hydrolase fold AMD06_RS04235 PF10677 AMD06_RS04235 AMD06_RS04240 PF01134 Glucose inhibited division protein A AMD06_RS04240 PF13932 GidA associated domain 3 AMD06_RS04250 PF00291 Pyridoxal-phosphate dependent enzyme AMD06_RS04255 PF02698 DUF218 domain AMD06_RS04260 PF12680 SnoaL-like domain AMD06_RS04265 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AMD06_RS04270 PF08241 Methyltransferase domain AMD06_RS04275 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS04280 PF12697 Alpha/beta hydrolase family AMD06_RS04290 PF00155 Aminotransferase class I and II AMD06_RS04295 PF04055 Radical SAM superfamily AMD06_RS04295 PF06968 Biotin and Thiamin Synthesis associated domain AMD06_RS04300 PF00156 Phosphoribosyl transferase domain AMD06_RS04305 PF01040 UbiA prenyltransferase family AMD06_RS04320 PF05819 AMD06_RS04320 AMD06_RS04330 PF05932 Tir chaperone protein (CesT) family AMD06_RS04355 PF01313 AMD06_RS04355 AMD06_RS04360 PF00813 AMD06_RS04360 AMD06_RS04365 PF01052 Surface presentation of antigens (SPOA) AMD06_RS04370 PF09483 AMD06_RS04370 AMD06_RS04375 PF00771 FHIPEP family AMD06_RS04380 PF01312 FlhB HrpN YscU SpaS Family AMD06_RS04385 PF09613 AMD06_RS04385 AMD06_RS04390 PF09487 AMD06_RS04390 AMD06_RS04395 PF01514 Secretory protein of YscJ/FliF family AMD06_RS04400 PF09502 AMD06_RS04400 AMD06_RS04405 PF02108 AMD06_RS04405 AMD06_RS04410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD06_RS04410 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD06_RS04415 PF09486 AMD06_RS04415 AMD06_RS04420 PF01311 AMD06_RS04420 AMD06_RS04425 PF00263 AMD06_RS04425 AMD06_RS04425 PF03958 Bacterial type II/III secretion system short domain AMD06_RS04435 PF01464 Transglycosylase SLT domain AMD06_RS04445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD06_RS04450 PF00924 Mechanosensitive ion channel AMD06_RS04450 PF12607 AMD06_RS04450 AMD06_RS04455 PF00884 Sulfatase AMD06_RS04465 PF05661 AMD06_RS04465 AMD06_RS04470 PF00990 GGDEF domain AMD06_RS04475 PF00534 Glycosyl transferases group 1 AMD06_RS04475 PF08323 Starch synthase catalytic domain AMD06_RS04480 PF00128 Alpha amylase, catalytic domain AMD06_RS04480 PF02806 Alpha amylase, C-terminal all-beta domain AMD06_RS04480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD06_RS04485 PF00128 Alpha amylase, catalytic domain AMD06_RS04485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD06_RS04485 PF11941 Domain of unknown function (DUF3459) AMD06_RS04490 PF02446 4-alpha-glucanotransferase AMD06_RS04495 PF00128 Alpha amylase, catalytic domain AMD06_RS04500 PF11154 AMD06_RS04500 AMD06_RS04505 PF00128 Alpha amylase, catalytic domain AMD06_RS04505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD06_RS04510 PF13460 NADH(P)-binding AMD06_RS04515 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS04520 PF00890 FAD binding domain AMD06_RS04520 PF13454 FAD-NAD(P)-binding AMD06_RS04530 PF06903 AMD06_RS04530 AMD06_RS04535 PF02321 Outer membrane efflux protein AMD06_RS04540 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS04545 PF16576 AMD06_RS04545 AMD06_RS04550 PF00873 AcrB/AcrD/AcrF family AMD06_RS04555 PF00106 short chain dehydrogenase AMD06_RS04565 PF00270 DEAD/DEAH box helicase AMD06_RS04565 PF00271 Helicase conserved C-terminal domain AMD06_RS04570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD06_RS04570 PF00364 Biotin-requiring enzyme AMD06_RS04570 PF02817 e3 binding domain AMD06_RS04575 PF07653 Variant SH3 domain AMD06_RS04580 PF02779 Transketolase, pyrimidine binding domain AMD06_RS04580 PF02780 Transketolase, C-terminal domain AMD06_RS04585 PF00676 Dehydrogenase E1 component AMD06_RS04590 PF00932 Lamin Tail Domain AMD06_RS04590 PF03160 Calx-beta domain AMD06_RS04590 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS04595 PF03301 Tryptophan 2,3-dioxygenase AMD06_RS04600 PF00854 POT family AMD06_RS04605 PF13899 Thioredoxin-like AMD06_RS04610 PF12802 MarR family AMD06_RS04615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS04615 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AMD06_RS04620 PF04209 homogentisate 1,2-dioxygenase AMD06_RS04635 PF03334 AMD06_RS04635 AMD06_RS04640 PF04066 AMD06_RS04640 AMD06_RS04645 PF01899 AMD06_RS04645 AMD06_RS04650 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD06_RS04655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD06_RS04660 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD06_RS04660 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD06_RS04660 PF04039 AMD06_RS04660 AMD06_RS04660 PF13244 AMD06_RS04660 AMD06_RS04665 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS04670 PF06127 AMD06_RS04670 AMD06_RS04675 PF01447 Thermolysin metallopeptidase, catalytic domain AMD06_RS04675 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD06_RS04675 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD06_RS04680 PF00182 Chitinase class I AMD06_RS04680 PF01471 Putative peptidoglycan binding domain AMD06_RS04680 PF01551 Peptidase family M23 AMD06_RS04700 PF01259 SAICAR synthetase AMD06_RS04705 PF00226 DnaJ domain AMD06_RS04710 PF13505 Outer membrane protein beta-barrel domain AMD06_RS04715 PF00834 Ribulose-phosphate 3 epimerase family AMD06_RS04720 PF00583 Acetyltransferase (GNAT) family AMD06_RS04725 PF00781 Diacylglycerol kinase catalytic domain AMD06_RS04730 PF00425 chorismate binding enzyme AMD06_RS04730 PF04715 Anthranilate synthase component I, N terminal region AMD06_RS04735 PF01212 Beta-eliminating lyase AMD06_RS04740 PF00117 Glutamine amidotransferase class-I AMD06_RS04745 PF01613 Flavin reductase like domain AMD06_RS04750 PF00591 Glycosyl transferase family, a/b domain AMD06_RS04750 PF02885 Glycosyl transferase family, helical bundle domain AMD06_RS04755 PF00218 Indole-3-glycerol phosphate synthase AMD06_RS04760 PF12710 haloacid dehalogenase-like hydrolase AMD06_RS04765 PF00027 Cyclic nucleotide-binding domain AMD06_RS04765 PF00325 Bacterial regulatory proteins, crp family AMD06_RS04770 PF02675 S-adenosylmethionine decarboxylase AMD06_RS04775 PF00893 Small Multidrug Resistance protein AMD06_RS04780 PF03232 AMD06_RS04780 AMD06_RS04785 PF00572 Ribosomal protein L13 AMD06_RS04790 PF00380 Ribosomal protein S9/S16 AMD06_RS04805 PF00293 NUDIX domain AMD06_RS04810 PF04324 BFD-like [2Fe-2S] binding domain AMD06_RS04815 PF00210 Ferritin-like domain AMD06_RS04820 PF00072 Response regulator receiver domain AMD06_RS04820 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS04820 PF01627 Hpt domain AMD06_RS04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS04825 PF00072 Response regulator receiver domain AMD06_RS04825 PF00563 EAL domain AMD06_RS04825 PF00990 GGDEF domain AMD06_RS04830 PF13548 AMD06_RS04830 AMD06_RS04840 PF04519 AMD06_RS04840 AMD06_RS04845 PF01521 Iron-sulphur cluster biosynthesis AMD06_RS04855 PF03583 Secretory lipase AMD06_RS04860 PF00293 NUDIX domain AMD06_RS04860 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD06_RS04860 PF09297 NADH pyrophosphatase zinc ribbon domain AMD06_RS04865 PF03186 AMD06_RS04865 AMD06_RS04870 PF10825 AMD06_RS04870 AMD06_RS04875 PF04505 AMD06_RS04875 AMD06_RS04885 PF01553 Acyltransferase AMD06_RS04885 PF07690 Major Facilitator Superfamily AMD06_RS04890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS04890 PF03466 LysR substrate binding domain AMD06_RS04895 PF07690 Major Facilitator Superfamily AMD06_RS04900 PF12805 AMD06_RS04900 AMD06_RS04900 PF13515 AMD06_RS04900 AMD06_RS04910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD06_RS04910 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD06_RS04910 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD06_RS04920 PF01808 AICARFT/IMPCHase bienzyme AMD06_RS04920 PF02142 MGS-like domain AMD06_RS04925 PF01066 CDP-alcohol phosphatidyltransferase AMD06_RS04930 PF12146 Putative lysophospholipase AMD06_RS04930 PF12147 AMD06_RS04930 AMD06_RS04935 PF00782 Dual specificity phosphatase, catalytic domain AMD06_RS04950 PF01066 CDP-alcohol phosphatidyltransferase AMD06_RS04955 PF01553 Acyltransferase AMD06_RS04960 PF01148 Cytidylyltransferase family AMD06_RS04965 PF02954 Bacterial regulatory protein, Fis family AMD06_RS04970 PF11906 AMD06_RS04970 AMD06_RS04980 PF01381 Helix-turn-helix AMD06_RS04990 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AMD06_RS05010 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD06_RS05010 PF02785 Biotin carboxylase C-terminal domain AMD06_RS05010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD06_RS05015 PF05635 23S rRNA-intervening sequence protein AMD06_RS05020 PF00364 Biotin-requiring enzyme AMD06_RS05025 PF01220 Dehydroquinase class II AMD06_RS05030 PF02683 AMD06_RS05030 AMD06_RS05030 PF11412 Disulphide bond corrector protein DsbC AMD06_RS05030 PF13899 Thioredoxin-like AMD06_RS05035 PF03091 CutA1 divalent ion tolerance protein AMD06_RS05040 PF12625 AMD06_RS05040 AMD06_RS05040 PF12833 Helix-turn-helix domain AMD06_RS05050 PF01852 START domain AMD06_RS05060 PF00106 short chain dehydrogenase AMD06_RS05065 PF00932 Lamin Tail Domain AMD06_RS05065 PF04231 Endonuclease I AMD06_RS05065 PF13205 Bacterial Ig-like domain AMD06_RS05070 PF00166 Chaperonin 10 Kd subunit AMD06_RS05075 PF00118 TCP-1/cpn60 chaperonin family AMD06_RS05085 PF00593 TonB dependent receptor AMD06_RS05085 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS05090 PF00793 DAHP synthetase I family AMD06_RS05105 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD06_RS05115 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD06_RS05115 PF08335 GlnD PII-uridylyltransferase AMD06_RS05120 PF02592 AMD06_RS05120 AMD06_RS05130 PF00082 Subtilase family AMD06_RS05130 PF09286 Pro-kumamolisin, activation domain AMD06_RS05135 PF06258 AMD06_RS05135 AMD06_RS05140 PF00881 Nitroreductase family AMD06_RS05145 PF04264 YceI-like domain AMD06_RS05155 PF00328 Histidine phosphatase superfamily (branch 2) AMD06_RS05160 PF04954 Siderophore-interacting protein AMD06_RS05160 PF08021 Siderophore-interacting FAD-binding domain AMD06_RS05165 PF03551 Transcriptional regulator PadR-like family AMD06_RS05170 PF16957 AMD06_RS05170 AMD06_RS05175 PF06857 AMD06_RS05175 AMD06_RS05180 PF01039 Carboxyl transferase domain AMD06_RS05185 PF06833 Malonate decarboxylase gamma subunit (MdcE) AMD06_RS05190 PF10620 AMD06_RS05190 AMD06_RS05195 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD06_RS05200 PF00698 Acyl transferase domain AMD06_RS05205 PF03600 Citrate transporter AMD06_RS05205 PF07158 AMD06_RS05205 AMD06_RS05210 PF00392 Bacterial regulatory proteins, gntR family AMD06_RS05210 PF07729 FCD domain AMD06_RS05215 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS05220 PF01740 STAS domain AMD06_RS05225 PF13581 Histidine kinase-like ATPase domain AMD06_RS05230 PF00672 HAMP domain AMD06_RS05230 PF02743 Cache domain AMD06_RS05230 PF07228 Stage II sporulation protein E (SpoIIE) AMD06_RS05240 PF01764 Lipase (class 3) AMD06_RS05245 PF07745 Glycosyl hydrolase family 53 AMD06_RS05250 PF00456 Transketolase, thiamine diphosphate binding domain AMD06_RS05255 PF13333 AMD06_RS05255 AMD06_RS05265 PF01527 Transposase AMD06_RS05270 PF00106 short chain dehydrogenase AMD06_RS05275 PF12833 Helix-turn-helix domain AMD06_RS05275 PF12852 Cupin AMD06_RS05285 PF00106 short chain dehydrogenase AMD06_RS05285 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS05290 PF01145 SPFH domain / Band 7 family AMD06_RS05295 PF13409 Glutathione S-transferase, N-terminal domain AMD06_RS05295 PF13410 Glutathione S-transferase, C-terminal domain AMD06_RS05300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS05305 PF13548 AMD06_RS05305 AMD06_RS05315 PF07791 AMD06_RS05315 AMD06_RS05320 PF01527 Transposase AMD06_RS05330 PF13333 AMD06_RS05330 AMD06_RS05335 PF07791 AMD06_RS05335 AMD06_RS05340 PF01433 Peptidase family M1 AMD06_RS05340 PF11838 ERAP1-like C-terminal domain AMD06_RS05345 PF13302 Acetyltransferase (GNAT) domain AMD06_RS05350 PF00588 SpoU rRNA Methylase family AMD06_RS05350 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD06_RS05355 PF00135 Carboxylesterase family AMD06_RS05360 PF03080 AMD06_RS05360 AMD06_RS05365 PF10566 Glycoside hydrolase 97 AMD06_RS05365 PF14508 Glycosyl-hydrolase 97 N-terminal AMD06_RS05365 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD06_RS05370 PF00703 Glycosyl hydrolases family 2 AMD06_RS05370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD06_RS05370 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD06_RS05370 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD06_RS05375 PF00593 TonB dependent receptor AMD06_RS05375 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS05380 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS05380 PF13377 Periplasmic binding protein-like domain AMD06_RS05390 PF04389 Peptidase family M28 AMD06_RS05395 PF01741 Large-conductance mechanosensitive channel, MscL AMD06_RS05400 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD06_RS05410 PF00355 Rieske [2Fe-2S] domain AMD06_RS05415 PF02080 TrkA-C domain AMD06_RS05415 PF03600 Citrate transporter AMD06_RS05420 PF02390 Putative methyltransferase AMD06_RS05425 PF05690 Thiazole biosynthesis protein ThiG AMD06_RS05430 PF02597 ThiS family AMD06_RS05435 PF00657 GDSL-like Lipase/Acylhydrolase AMD06_RS05435 PF03797 Autotransporter beta-domain AMD06_RS05445 PF00589 Phage integrase family AMD06_RS05450 PF05593 AMD06_RS05450 AMD06_RS05455 PF05593 AMD06_RS05455 AMD06_RS05480 PF01381 Helix-turn-helix AMD06_RS05485 PF13280 AMD06_RS05485 AMD06_RS05495 PF14464 Prokaryotic homologs of the JAB domain AMD06_RS05505 PF00589 Phage integrase family AMD06_RS05520 PF04002 RadC-like JAB domain AMD06_RS05535 PF07791 AMD06_RS05535 AMD06_RS05540 PF14412 AMD06_RS05540 AMD06_RS05555 PF01555 DNA methylase AMD06_RS05560 PF04851 Type III restriction enzyme, res subunit AMD06_RS05565 PF14082 AMD06_RS05565 AMD06_RS05580 PF00665 Integrase core domain AMD06_RS05580 PF13936 Helix-turn-helix domain AMD06_RS05585 PF01695 IstB-like ATP binding protein AMD06_RS05600 PF13391 AMD06_RS05600 AMD06_RS05610 PF03389 MobA/MobL family AMD06_RS05620 PF00565 Staphylococcal nuclease homologue AMD06_RS05630 PF00816 H-NS histone family AMD06_RS05635 PF00128 Alpha amylase, catalytic domain AMD06_RS05635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD06_RS05650 PF00072 Response regulator receiver domain AMD06_RS05650 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS05655 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS05655 PF00672 HAMP domain AMD06_RS05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS05660 PF00665 Integrase core domain AMD06_RS05660 PF13276 AMD06_RS05660 AMD06_RS05665 PF01527 Transposase AMD06_RS05670 PF08845 AMD06_RS05670 AMD06_RS05675 PF05593 AMD06_RS05675 AMD06_RS05680 PF01121 Dephospho-CoA kinase AMD06_RS05685 PF01478 Type IV leader peptidase family AMD06_RS05685 PF06750 AMD06_RS05685 AMD06_RS05690 PF00482 Type II secretion system (T2SS), protein F AMD06_RS05695 PF00114 Pilin (bacterial filament) AMD06_RS05695 PF13633 Prokaryotic N-terminal methylation site AMD06_RS05700 PF00114 Pilin (bacterial filament) AMD06_RS05700 PF13633 Prokaryotic N-terminal methylation site AMD06_RS05705 PF00437 Type II/IV secretion system protein AMD06_RS05705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD06_RS05715 PF00072 Response regulator receiver domain AMD06_RS05715 PF00158 Sigma-54 interaction domain AMD06_RS05715 PF02954 Bacterial regulatory protein, Fis family AMD06_RS05720 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS05725 PF00549 CoA-ligase AMD06_RS05725 PF08442 ATP-grasp domain AMD06_RS05730 PF00549 CoA-ligase AMD06_RS05730 PF02629 CoA binding domain AMD06_RS05740 PF12760 Transposase zinc-ribbon domain AMD06_RS05740 PF12762 AMD06_RS05740 AMD06_RS05755 PF01129 NAD:arginine ADP-ribosyltransferase AMD06_RS05765 PF00665 Integrase core domain AMD06_RS05765 PF13936 Helix-turn-helix domain AMD06_RS05775 PF00959 Phage lysozyme AMD06_RS05790 PF04550 AMD06_RS05790 AMD06_RS05805 PF01527 Transposase AMD06_RS05810 PF00665 Integrase core domain AMD06_RS05810 PF13276 AMD06_RS05810 AMD06_RS05815 PF14700 DNA-directed RNA polymerase N-terminal AMD06_RS05870 PF13155 Toprim-like AMD06_RS05885 PF04606 AMD06_RS05885 AMD06_RS05900 PF05954 Phage late control gene D protein (GPD) AMD06_RS05905 PF06995 AMD06_RS05905 AMD06_RS05910 PF10145 AMD06_RS05910 AMD06_RS05915 PF10109 AMD06_RS05915 AMD06_RS05920 PF04985 AMD06_RS05920 AMD06_RS05925 PF04984 Phage tail sheath protein AMD06_RS05930 PF04965 Gene 25-like lysozyme AMD06_RS05935 PF04717 Phage-related baseplate assembly protein AMD06_RS05955 PF09684 AMD06_RS05955 AMD06_RS05960 PF04865 AMD06_RS05960 AMD06_RS05965 PF00072 Response regulator receiver domain AMD06_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS05970 PF08448 PAS fold AMD06_RS05975 PF05069 AMD06_RS05975 AMD06_RS05980 PF06891 AMD06_RS05980 AMD06_RS05995 PF05449 AMD06_RS05995 AMD06_RS06000 PF16931 AMD06_RS06000 AMD06_RS06005 PF05489 Phage Tail Protein X AMD06_RS06010 PF05926 AMD06_RS06010 AMD06_RS06015 PF05944 AMD06_RS06015 AMD06_RS06020 PF05125 AMD06_RS06020 AMD06_RS06025 PF05929 AMD06_RS06025 AMD06_RS06030 PF03237 Terminase-like family AMD06_RS06030 PF06056 Putative ATPase subunit of terminase (gpP-like) AMD06_RS06035 PF04860 Phage portal protein AMD06_RS06040 PF01555 DNA methylase AMD06_RS06045 PF01695 IstB-like ATP binding protein AMD06_RS06050 PF06114 Domain of unknown function (DUF955) AMD06_RS06055 PF00817 impB/mucB/samB family AMD06_RS06055 PF11799 impB/mucB/samB family C-terminal domain AMD06_RS06055 PF13438 AMD06_RS06055 AMD06_RS06060 PF00717 Peptidase S24-like AMD06_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS06075 PF05697 Bacterial trigger factor protein (TF) AMD06_RS06075 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD06_RS06080 PF00574 Clp protease AMD06_RS06085 PF06689 ClpX C4-type zinc finger AMD06_RS06085 PF07724 AAA domain (Cdc48 subfamily) AMD06_RS06085 PF10431 C-terminal, D2-small domain, of ClpB protein AMD06_RS06090 PF00004 ATPase family associated with various cellular activities (AAA) AMD06_RS06090 PF02190 ATP-dependent protease La (LON) domain AMD06_RS06090 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD06_RS06095 PF00216 Bacterial DNA-binding protein AMD06_RS06115 PF13145 PPIC-type PPIASE domain AMD06_RS06115 PF13616 PPIC-type PPIASE domain AMD06_RS06115 PF13623 AMD06_RS06115 AMD06_RS06120 PF01464 Transglycosylase SLT domain AMD06_RS06120 PF01476 LysM domain AMD06_RS06125 PF00753 Metallo-beta-lactamase superfamily AMD06_RS06125 PF16123 AMD06_RS06125 AMD06_RS06135 PF00075 RNase H AMD06_RS06140 PF00929 Exonuclease AMD06_RS06145 PF13672 Protein phosphatase 2C AMD06_RS06160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD06_RS06165 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family AMD06_RS06170 PF12706 Beta-lactamase superfamily domain AMD06_RS06175 PF04055 Radical SAM superfamily AMD06_RS06175 PF06463 Molybdenum Cofactor Synthesis C AMD06_RS06175 PF13353 4Fe-4S single cluster domain AMD06_RS06185 PF01967 MoaC family AMD06_RS06190 PF02597 ThiS family AMD06_RS06195 PF02391 MoaE protein AMD06_RS06200 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS06205 PF01527 Transposase AMD06_RS06210 PF00665 Integrase core domain AMD06_RS06210 PF13276 AMD06_RS06210 AMD06_RS06215 PF03389 MobA/MobL family AMD06_RS06230 PF00589 Phage integrase family AMD06_RS06240 PF12169 DNA polymerase III subunits gamma and tau domain III AMD06_RS06240 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD06_RS06240 PF13177 DNA polymerase III, delta subunit AMD06_RS06245 PF02575 YbaB/EbfC DNA-binding family AMD06_RS06250 PF02132 RecR protein AMD06_RS06250 PF13662 Toprim domain AMD06_RS06255 PF01230 HIT domain AMD06_RS06260 PF03843 AMD06_RS06260 AMD06_RS06265 PF01841 Transglutaminase-like superfamily AMD06_RS06265 PF11992 AMD06_RS06265 AMD06_RS06270 PF01882 AMD06_RS06270 AMD06_RS06275 PF07726 ATPase family associated with various cellular activities (AAA) AMD06_RS06280 PF13231 AMD06_RS06280 AMD06_RS06300 PF02545 Maf-like protein AMD06_RS06305 PF02620 AMD06_RS06305 AMD06_RS06310 PF01783 Ribosomal L32p protein family AMD06_RS06315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD06_RS06315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD06_RS06320 PF08670 AMD06_RS06320 AMD06_RS06325 PF00698 Acyl transferase domain AMD06_RS06330 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS06335 PF00550 Phosphopantetheine attachment site AMD06_RS06340 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD06_RS06340 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD06_RS06345 PF00425 chorismate binding enzyme AMD06_RS06350 PF02618 YceG-like family AMD06_RS06355 PF13177 DNA polymerase III, delta subunit AMD06_RS06360 PF07238 PilZ domain AMD06_RS06375 PF00158 Sigma-54 interaction domain AMD06_RS06375 PF02954 Bacterial regulatory protein, Fis family AMD06_RS06375 PF06506 Propionate catabolism activator AMD06_RS06380 PF13714 Phosphoenolpyruvate phosphomutase AMD06_RS06385 PF00285 Citrate synthase AMD06_RS06390 PF00330 Aconitase family (aconitate hydratase) AMD06_RS06390 PF00694 Aconitase C-terminal domain AMD06_RS06395 PF03693 Uncharacterised protein family (UPF0156) AMD06_RS06400 PF04303 PrpF protein AMD06_RS06405 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS06410 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD06_RS06415 PF00207 Alpha-2-macroglobulin family AMD06_RS06415 PF01835 MG2 domain AMD06_RS06415 PF07703 Alpha-2-macroglobulin family N-terminal region AMD06_RS06415 PF11974 Alpha-2-macroglobulin MG1 domain AMD06_RS06420 PF00593 TonB dependent receptor AMD06_RS06420 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS06425 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD06_RS06425 PF16387 AMD06_RS06425 AMD06_RS06430 PF00905 Penicillin binding protein transpeptidase domain AMD06_RS06430 PF00912 Transglycosylase AMD06_RS06430 PF06832 AMD06_RS06430 AMD06_RS06435 PF00210 Ferritin-like domain AMD06_RS06440 PF08534 Redoxin AMD06_RS06445 PF00011 Hsp20/alpha crystallin family AMD06_RS06450 PF00226 DnaJ domain AMD06_RS06450 PF01556 DnaJ C terminal domain AMD06_RS06455 PF00072 Response regulator receiver domain AMD06_RS06460 PF01145 SPFH domain / Band 7 family AMD06_RS06465 PF01145 SPFH domain / Band 7 family AMD06_RS06470 PF01797 Transposase IS200 like AMD06_RS06475 PF00709 Adenylosuccinate synthetase AMD06_RS06480 PF01433 Peptidase family M1 AMD06_RS06480 PF11838 ERAP1-like C-terminal domain AMD06_RS06490 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS06495 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS06535 PF05016 Plasmid stabilisation system protein AMD06_RS06545 PF00069 Protein kinase domain AMD06_RS06560 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS06565 PF00300 Histidine phosphatase superfamily (branch 1) AMD06_RS06570 PF01256 Carbohydrate kinase AMD06_RS06575 PF02055 O-Glycosyl hydrolase family 30 AMD06_RS06575 PF17189 AMD06_RS06575 AMD06_RS06580 PF00723 Glycosyl hydrolases family 15 AMD06_RS06585 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS06590 PF07971 Glycosyl hydrolase family 92 AMD06_RS06595 PF00106 short chain dehydrogenase AMD06_RS06605 PF13532 2OG-Fe(II) oxygenase superfamily AMD06_RS06610 PF00027 Cyclic nucleotide-binding domain AMD06_RS06610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS06615 PF02148 Zn-finger in ubiquitin-hydrolases and other protein AMD06_RS06620 PF00563 EAL domain AMD06_RS06625 PF13328 HD domain AMD06_RS06630 PF00005 ABC transporter AMD06_RS06635 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD06_RS06635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD06_RS06640 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD06_RS06640 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD06_RS06645 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD06_RS06645 PF01799 [2Fe-2S] binding domain AMD06_RS06650 PF05559 AMD06_RS06650 AMD06_RS06660 PF07883 Cupin domain AMD06_RS06670 PF02661 Fic/DOC family AMD06_RS06675 PF04014 Antidote-toxin recognition MazE AMD06_RS06680 PF00717 Peptidase S24-like AMD06_RS06680 PF01726 LexA DNA binding domain AMD06_RS06690 PF00817 impB/mucB/samB family AMD06_RS06695 PF02811 PHP domain AMD06_RS06695 PF07733 Bacterial DNA polymerase III alpha subunit AMD06_RS06695 PF14579 Helix-hairpin-helix motif AMD06_RS06700 PF00326 Prolyl oligopeptidase family AMD06_RS06705 PF08668 HDOD domain AMD06_RS06710 PF03169 AMD06_RS06710 AMD06_RS06715 PF13557 AMD06_RS06715 AMD06_RS06725 PF00326 Prolyl oligopeptidase family AMD06_RS06725 PF07676 WD40-like Beta Propeller Repeat AMD06_RS06740 PF08448 PAS fold AMD06_RS06740 PF12833 Helix-turn-helix domain AMD06_RS06765 PF00270 DEAD/DEAH box helicase AMD06_RS06765 PF00271 Helicase conserved C-terminal domain AMD06_RS06765 PF02559 CarD-like/TRCF domain AMD06_RS06765 PF03461 TRCF domain AMD06_RS06770 PF00583 Acetyltransferase (GNAT) family AMD06_RS06775 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AMD06_RS06780 PF00072 Response regulator receiver domain AMD06_RS06780 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS06785 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS06785 PF00672 HAMP domain AMD06_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS06790 PF00112 Papain family cysteine protease AMD06_RS06795 PF06123 AMD06_RS06795 AMD06_RS06810 PF00795 Carbon-nitrogen hydrolase AMD06_RS06815 PF12275 AMD06_RS06815 AMD06_RS06820 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD06_RS06825 PF01475 Ferric uptake regulator family AMD06_RS06830 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS06830 PF14246 AefR-like transcriptional repressor, C-terminal region AMD06_RS06835 PF00529 HlyD family secretion protein AMD06_RS06835 PF16576 AMD06_RS06835 AMD06_RS06840 PF00873 AcrB/AcrD/AcrF family AMD06_RS06845 PF02321 Outer membrane efflux protein AMD06_RS06850 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS06855 PF07883 Cupin domain AMD06_RS06860 PF06719 AMD06_RS06860 AMD06_RS06860 PF12833 Helix-turn-helix domain AMD06_RS06870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS06870 PF03466 LysR substrate binding domain AMD06_RS06875 PF07690 Major Facilitator Superfamily AMD06_RS06880 PF00248 Aldo/keto reductase family AMD06_RS06890 PF00082 Subtilase family AMD06_RS06890 PF01483 Proprotein convertase P-domain AMD06_RS06900 PF00082 Subtilase family AMD06_RS06900 PF01483 Proprotein convertase P-domain AMD06_RS06905 PF00593 TonB dependent receptor AMD06_RS06905 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS06910 PF00593 TonB dependent receptor AMD06_RS06910 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS06915 PF03203 AMD06_RS06915 AMD06_RS06920 PF17067 AMD06_RS06920 AMD06_RS06925 PF00107 Zinc-binding dehydrogenase AMD06_RS06925 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS06930 PF00654 Voltage gated chloride channel AMD06_RS06935 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AMD06_RS06940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD06_RS06940 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD06_RS06945 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD06_RS06945 PF02805 Metal binding domain of Ada AMD06_RS06945 PF06029 AlkA N-terminal domain AMD06_RS06945 PF12833 Helix-turn-helix domain AMD06_RS06960 PF13211 AMD06_RS06960 AMD06_RS06965 PF01124 MAPEG family AMD06_RS06975 PF13275 S4 domain AMD06_RS06985 PF04542 Sigma-70 region 2 AMD06_RS06985 PF08281 Sigma-70, region 4 AMD06_RS06990 PF00270 DEAD/DEAH box helicase AMD06_RS06990 PF00271 Helicase conserved C-terminal domain AMD06_RS06990 PF03880 DbpA RNA binding domain AMD06_RS06995 PF00563 EAL domain AMD06_RS06995 PF00990 GGDEF domain AMD06_RS06995 PF08447 PAS fold AMD06_RS07000 PF00849 RNA pseudouridylate synthase AMD06_RS07000 PF01479 S4 domain AMD06_RS07005 PF00990 GGDEF domain AMD06_RS07005 PF01590 GAF domain AMD06_RS07010 PF00892 EamA-like transporter family AMD06_RS07015 PF01904 Protein of unknown function DUF72 AMD06_RS07025 PF03737 Demethylmenaquinone methyltransferase AMD06_RS07030 PF00144 Beta-lactamase AMD06_RS07030 PF11954 AMD06_RS07030 AMD06_RS07035 PF00999 Sodium/hydrogen exchanger family AMD06_RS07040 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS07040 PF00672 HAMP domain AMD06_RS07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS07045 PF00072 Response regulator receiver domain AMD06_RS07045 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS07050 PF02321 Outer membrane efflux protein AMD06_RS07055 PF06629 AMD06_RS07055 AMD06_RS07060 PF16576 AMD06_RS07060 AMD06_RS07065 PF00873 AcrB/AcrD/AcrF family AMD06_RS07070 PF07929 Plasmid pRiA4b ORF-3-like protein AMD06_RS07075 PF00005 ABC transporter AMD06_RS07075 PF00664 ABC transporter transmembrane region AMD06_RS07080 PF05960 Bacterial protein of unknown function (DUF885) AMD06_RS07090 PF14257 AMD06_RS07090 AMD06_RS07105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS07105 PF03466 LysR substrate binding domain AMD06_RS07110 PF00892 EamA-like transporter family AMD06_RS07115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD06_RS07120 PF04070 AMD06_RS07120 AMD06_RS07135 PF14539 Domain of unknown function (DUF4442) AMD06_RS07145 PF00085 Thioredoxin AMD06_RS07145 PF14559 Tetratricopeptide repeat AMD06_RS07145 PF14561 Tetratricopeptide repeat AMD06_RS07150 PF06197 AMD06_RS07150 AMD06_RS07155 PF00133 tRNA synthetases class I (I, L, M and V) AMD06_RS07155 PF08264 Anticodon-binding domain of tRNA AMD06_RS07155 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD06_RS07160 PF04390 Lipopolysaccharide-assembly AMD06_RS07165 PF06144 DNA polymerase III, delta subunit AMD06_RS07170 PF01467 Cytidylyltransferase AMD06_RS07175 PF02410 Oligomerisation domain AMD06_RS07180 PF05787 Bacterial protein of unknown function (DUF839) AMD06_RS07180 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD06_RS07185 PF02590 Predicted SPOUT methyltransferase AMD06_RS07190 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS07195 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS07195 PF13620 Carboxypeptidase regulatory-like domain AMD06_RS07200 PF04402 Protein of unknown function (DUF541) AMD06_RS07205 PF02545 Maf-like protein AMD06_RS07210 PF10150 Ribonuclease E/G family AMD06_RS07215 PF13116 AMD06_RS07215 AMD06_RS07215 PF13502 AMD06_RS07215 AMD06_RS07225 PF01523 Putative modulator of DNA gyrase AMD06_RS07230 PF04751 Protein of unknown function (DUF615) AMD06_RS07235 PF01523 Putative modulator of DNA gyrase AMD06_RS07240 PF09685 AMD06_RS07240 AMD06_RS07245 PF14521 Lysine-specific metallo-endopeptidase AMD06_RS07250 PF00348 Polyprenyl synthetase AMD06_RS07255 PF02609 Exonuclease VII small subunit AMD06_RS07260 PF01171 PP-loop family AMD06_RS07260 PF09179 TilS substrate binding domain AMD06_RS07260 PF11734 TilS substrate C-terminal domain AMD06_RS07265 PF00245 Alkaline phosphatase AMD06_RS07270 PF00375 Sodium:dicarboxylate symporter family AMD06_RS07275 PF13847 Methyltransferase domain AMD06_RS07280 PF03061 Thioesterase superfamily AMD06_RS07285 PF00877 NlpC/P60 family AMD06_RS07290 PF00877 NlpC/P60 family AMD06_RS07295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD06_RS07300 PF04235 AMD06_RS07300 AMD06_RS07305 PF01266 FAD dependent oxidoreductase AMD06_RS07310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD06_RS07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS07315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD06_RS07320 PF01694 Rhomboid family AMD06_RS07325 PF01431 Peptidase family M13 AMD06_RS07325 PF05649 Peptidase family M13 AMD06_RS07330 PF01431 Peptidase family M13 AMD06_RS07330 PF05649 Peptidase family M13 AMD06_RS07335 PF01431 Peptidase family M13 AMD06_RS07335 PF05649 Peptidase family M13 AMD06_RS07340 PF01593 Flavin containing amine oxidoreductase AMD06_RS07345 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS07350 PF00593 TonB dependent receptor AMD06_RS07350 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS07355 PF10609 ParA/MinD ATPase like AMD06_RS07360 PF00692 dUTPase AMD06_RS07375 PF01230 HIT domain AMD06_RS07380 PF01738 Dienelactone hydrolase family AMD06_RS07385 PF00919 Uncharacterized protein family UPF0004 AMD06_RS07385 PF04055 Radical SAM superfamily AMD06_RS07390 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD06_RS07390 PF03449 Transcription elongation factor, N-terminal AMD06_RS07395 PF01694 Rhomboid family AMD06_RS07405 PF00293 NUDIX domain AMD06_RS07410 PF05872 AMD06_RS07410 AMD06_RS07415 PF01464 Transglycosylase SLT domain AMD06_RS07415 PF01476 LysM domain AMD06_RS07420 PF02666 AMD06_RS07420 AMD06_RS07425 PF02630 SCO1/SenC AMD06_RS07430 PF05175 Methyltransferase small domain AMD06_RS07435 PF01264 Chorismate synthase AMD06_RS07440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD06_RS07440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD06_RS07445 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD06_RS07445 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD06_RS07460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS07465 PF01416 tRNA pseudouridine synthase AMD06_RS07470 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD06_RS07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS07475 PF03466 LysR substrate binding domain AMD06_RS07480 PF00291 Pyridoxal-phosphate dependent enzyme AMD06_RS07490 PF00290 Tryptophan synthase alpha chain AMD06_RS07495 PF01039 Carboxyl transferase domain AMD06_RS07500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD06_RS07500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD06_RS07500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD06_RS07500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD06_RS07510 PF03171 2OG-Fe(II) oxygenase superfamily AMD06_RS07510 PF14226 non-haem dioxygenase in morphine synthesis N-terminal AMD06_RS07520 PF00563 EAL domain AMD06_RS07520 PF00672 HAMP domain AMD06_RS07520 PF00990 GGDEF domain AMD06_RS07520 PF14827 Sensory domain of two-component sensor kinase AMD06_RS07525 PF11231 AMD06_RS07525 AMD06_RS07530 PF01152 Bacterial-like globin AMD06_RS07535 PF00106 short chain dehydrogenase AMD06_RS07540 PF00121 Triosephosphate isomerase AMD06_RS07545 PF03840 Preprotein translocase SecG subunit AMD06_RS07555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD06_RS07560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD06_RS07565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD06_RS07570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD06_RS07575 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AMD06_RS07580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD06_RS07580 PF10531 SLBB domain AMD06_RS07580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD06_RS07585 PF00384 Molybdopterin oxidoreductase AMD06_RS07585 PF01568 Molydopterin dinucleotide binding domain AMD06_RS07585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD06_RS07585 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD06_RS07590 PF00146 NADH dehydrogenase AMD06_RS07595 PF12838 4Fe-4S dicluster domain AMD06_RS07600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD06_RS07605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD06_RS07610 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD06_RS07610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD06_RS07615 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD06_RS07620 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD06_RS07630 PF02576 Uncharacterised BCR, YhbC family COG0779 AMD06_RS07635 PF00575 S1 RNA binding domain AMD06_RS07635 PF08529 NusA N-terminal domain AMD06_RS07635 PF13184 NusA-like KH domain AMD06_RS07635 PF14520 Helix-hairpin-helix domain AMD06_RS07640 PF00009 Elongation factor Tu GTP binding domain AMD06_RS07640 PF04760 Translation initiation factor IF-2, N-terminal region AMD06_RS07640 PF08364 AMD06_RS07640 AMD06_RS07640 PF11987 Translation-initiation factor 2 AMD06_RS07645 PF02033 Ribosome-binding factor A AMD06_RS07650 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD06_RS07650 PF09157 Pseudouridine synthase II TruB, C-terminal AMD06_RS07650 PF16198 AMD06_RS07650 AMD06_RS07655 PF00312 Ribosomal protein S15 AMD06_RS07660 PF00013 KH domain AMD06_RS07660 PF00575 S1 RNA binding domain AMD06_RS07660 PF01138 3' exoribonuclease family, domain 1 AMD06_RS07660 PF03725 3' exoribonuclease family, domain 2 AMD06_RS07660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD06_RS07665 PF10030 AMD06_RS07665 AMD06_RS07670 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD06_RS07670 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD06_RS07675 PF03966 Trm112p-like protein AMD06_RS07680 PF00731 AIR carboxylase AMD06_RS07685 PF02222 ATP-grasp domain AMD06_RS07690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD06_RS07690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD06_RS07695 PF00462 Glutaredoxin AMD06_RS07700 PF00106 short chain dehydrogenase AMD06_RS07705 PF01914 AMD06_RS07705 AMD06_RS07710 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS07710 PF13620 Carboxypeptidase regulatory-like domain AMD06_RS07715 PF03641 Possible lysine decarboxylase AMD06_RS07715 PF11892 Domain of unknown function (DUF3412) AMD06_RS07715 PF14793 Domain of unknown function (DUF4478) AMD06_RS07720 PF06580 AMD06_RS07720 AMD06_RS07725 PF12019 Type II transport protein GspH AMD06_RS07725 PF13633 Prokaryotic N-terminal methylation site AMD06_RS07730 PF13544 AMD06_RS07730 AMD06_RS07735 PF13544 AMD06_RS07735 AMD06_RS07735 PF16074 AMD06_RS07735 AMD06_RS07740 PF13681 AMD06_RS07740 AMD06_RS07740 PF14341 AMD06_RS07740 AMD06_RS07745 PF05567 Neisseria PilC beta-propeller domain AMD06_RS07750 PF13633 Prokaryotic N-terminal methylation site AMD06_RS07750 PF16732 AMD06_RS07750 AMD06_RS07760 PF01527 Transposase AMD06_RS07770 PF04717 Phage-related baseplate assembly protein AMD06_RS07775 PF11459 AMD06_RS07775 AMD06_RS07775 PF17194 AMD06_RS07775 AMD06_RS07780 PF08843 Nucleotidyl transferase of unknown function (DUF1814) AMD06_RS07790 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD06_RS07795 PF04002 RadC-like JAB domain AMD06_RS07800 PF05284 AMD06_RS07800 AMD06_RS07805 PF13560 Helix-turn-helix domain AMD06_RS07810 PF01527 Transposase AMD06_RS07820 PF10070 AMD06_RS07820 AMD06_RS07825 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD06_RS07825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD06_RS07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS07830 PF03466 LysR substrate binding domain AMD06_RS07845 PF00672 HAMP domain AMD06_RS07845 PF17201 AMD06_RS07845 AMD06_RS07850 PF00072 Response regulator receiver domain AMD06_RS07850 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS07855 PF07495 Y_Y_Y domain AMD06_RS07855 PF07730 Histidine kinase AMD06_RS07860 PF12833 Helix-turn-helix domain AMD06_RS07865 PF00857 Isochorismatase family AMD06_RS07870 PF07681 AMD06_RS07870 AMD06_RS07875 PF07969 Amidohydrolase family AMD06_RS07885 PF05977 Transmembrane secretion effector AMD06_RS07900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD06_RS07900 PF10414 Sirohaem synthase dimerisation region AMD06_RS07900 PF13241 Putative NAD(P)-binding AMD06_RS07900 PF14824 Sirohaem biosynthesis protein central AMD06_RS07905 PF00072 Response regulator receiver domain AMD06_RS07910 PF10685 AMD06_RS07910 AMD06_RS07915 PF05974 Domain of unknown function (DUF892) AMD06_RS07920 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMD06_RS07925 PF07081 Protein of unknown function (DUF1349) AMD06_RS07930 PF00563 EAL domain AMD06_RS07935 PF12951 AMD06_RS07935 AMD06_RS07935 PF13018 AMD06_RS07935 AMD06_RS07940 PF00072 Response regulator receiver domain AMD06_RS07940 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS07945 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS07950 PF02321 Outer membrane efflux protein AMD06_RS07955 PF00873 AcrB/AcrD/AcrF family AMD06_RS07960 PF16576 AMD06_RS07960 AMD06_RS07970 PF00082 Subtilase family AMD06_RS07970 PF03797 Autotransporter beta-domain AMD06_RS07970 PF12951 AMD06_RS07970 AMD06_RS07985 PF06580 AMD06_RS07985 AMD06_RS07990 PF00072 Response regulator receiver domain AMD06_RS07990 PF04397 LytTr DNA-binding domain AMD06_RS07995 PF00144 Beta-lactamase AMD06_RS08005 PF07995 Glucose / Sorbosone dehydrogenase AMD06_RS08025 PF09335 AMD06_RS08025 AMD06_RS08035 PF01527 Transposase AMD06_RS08040 PF00665 Integrase core domain AMD06_RS08040 PF13276 AMD06_RS08040 AMD06_RS08050 PF12375 AMD06_RS08050 AMD06_RS08060 PF05707 Zonular occludens toxin (Zot) AMD06_RS08080 PF17091 AMD06_RS08080 AMD06_RS08085 PF02303 Helix-destabilising protein AMD06_RS08090 PF02486 AMD06_RS08090 AMD06_RS08100 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS08105 PF00732 GMC oxidoreductase AMD06_RS08105 PF05199 GMC oxidoreductase AMD06_RS08110 PF12697 Alpha/beta hydrolase family AMD06_RS08110 PF13618 AMD06_RS08110 AMD06_RS08115 PF00535 Glycosyl transferase family 2 AMD06_RS08120 PF05401 Nodulation protein S (NodS) AMD06_RS08125 PF02585 GlcNAc-PI de-N-acetylase AMD06_RS08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS08135 PF01596 O-methyltransferase AMD06_RS08140 PF04940 Sensors of blue-light using FAD AMD06_RS08155 PF01106 NifU-like domain AMD06_RS08155 PF01521 Iron-sulphur cluster biosynthesis AMD06_RS08160 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD06_RS08165 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS08170 PF02535 AMD06_RS08170 AMD06_RS08175 PF11737 AMD06_RS08175 AMD06_RS08180 PF00849 RNA pseudouridylate synthase AMD06_RS08180 PF01479 S4 domain AMD06_RS08185 PF00575 S1 RNA binding domain AMD06_RS08185 PF10150 Ribonuclease E/G family AMD06_RS08190 PF00072 Response regulator receiver domain AMD06_RS08190 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS08195 PF00581 Rhodanese-like domain AMD06_RS08205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD06_RS08210 PF03486 HI0933-like protein AMD06_RS08215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD06_RS08215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD06_RS08215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD06_RS08225 PF00589 Phage integrase family AMD06_RS08230 PF01527 Transposase AMD06_RS08235 PF00665 Integrase core domain AMD06_RS08235 PF13276 AMD06_RS08235 AMD06_RS08240 PF01527 Transposase AMD06_RS08245 PF00665 Integrase core domain AMD06_RS08250 PF00501 AMP-binding enzyme AMD06_RS08250 PF00550 Phosphopantetheine attachment site AMD06_RS08250 PF00668 Condensation domain AMD06_RS08250 PF00975 Thioesterase domain AMD06_RS08250 PF13193 AMP-binding enzyme C-terminal domain AMD06_RS08255 PF00501 AMP-binding enzyme AMD06_RS08255 PF00550 Phosphopantetheine attachment site AMD06_RS08255 PF00668 Condensation domain AMD06_RS08255 PF13193 AMP-binding enzyme C-terminal domain AMD06_RS08270 PF05598 AMD06_RS08270 AMD06_RS08285 PF01609 Transposase DDE domain AMD06_RS08290 PF00665 Integrase core domain AMD06_RS08290 PF13936 Helix-turn-helix domain AMD06_RS08300 PF12101 AMD06_RS08300 AMD06_RS08305 PF13091 PLD-like domain AMD06_RS08310 PF09369 AMD06_RS08310 AMD06_RS08315 PF00271 Helicase conserved C-terminal domain AMD06_RS08325 PF00271 Helicase conserved C-terminal domain AMD06_RS08330 PF01695 IstB-like ATP binding protein AMD06_RS08335 PF00665 Integrase core domain AMD06_RS08335 PF13936 Helix-turn-helix domain AMD06_RS08340 PF00176 SNF2 family N-terminal domain AMD06_RS08345 PF00145 C-5 cytosine-specific DNA methylase AMD06_RS08355 PF01695 IstB-like ATP binding protein AMD06_RS08360 PF00665 Integrase core domain AMD06_RS08360 PF13936 Helix-turn-helix domain AMD06_RS08365 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD06_RS08370 PF13614 AAA domain AMD06_RS08380 PF02195 ParB-like nuclease domain AMD06_RS08385 PF11198 AMD06_RS08385 AMD06_RS08395 PF08900 AMD06_RS08395 AMD06_RS08400 PF11358 AMD06_RS08400 AMD06_RS08405 PF00436 Single-strand binding protein family AMD06_RS08410 PF01131 DNA topoisomerase AMD06_RS08410 PF01396 AMD06_RS08410 AMD06_RS08410 PF01751 Toprim domain AMD06_RS08415 PF00145 C-5 cytosine-specific DNA methylase AMD06_RS08450 PF11284 AMD06_RS08450 AMD06_RS08460 PF13936 Helix-turn-helix domain AMD06_RS08465 PF12101 AMD06_RS08465 AMD06_RS08470 PF11679 AMD06_RS08470 AMD06_RS08495 PF00271 Helicase conserved C-terminal domain AMD06_RS08515 PF01464 Transglycosylase SLT domain AMD06_RS08520 PF11072 AMD06_RS08520 AMD06_RS08525 PF12696 TraM recognition site of TraD and TraG AMD06_RS08530 PF14348 AMD06_RS08530 AMD06_RS08535 PF09686 AMD06_RS08535 AMD06_RS08540 PF11660 AMD06_RS08540 AMD06_RS08545 PF11190 AMD06_RS08545 AMD06_RS08550 PF11990 AMD06_RS08550 AMD06_RS08555 PF11444 AMD06_RS08555 AMD06_RS08560 PF11920 AMD06_RS08560 AMD06_RS08575 PF11130 AMD06_RS08575 AMD06_RS08580 PF13462 Thioredoxin AMD06_RS08585 PF04002 RadC-like JAB domain AMD06_RS08590 PF07511 AMD06_RS08590 AMD06_RS08595 PF06834 AMD06_RS08595 AMD06_RS08610 PF07916 AMD06_RS08610 AMD06_RS08615 PF12553 AMD06_RS08615 AMD06_RS08620 PF08808 AMD06_RS08620 AMD06_RS08630 PF07514 Putative helicase AMD06_RS08645 PF04610 AMD06_RS08645 AMD06_RS08655 PF05231 AMD06_RS08655 AMD06_RS08670 PF01609 Transposase DDE domain AMD06_RS08670 PF05598 AMD06_RS08670 AMD06_RS08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS08675 PF03466 LysR substrate binding domain AMD06_RS08680 PF13560 Helix-turn-helix domain AMD06_RS08690 PF01695 IstB-like ATP binding protein AMD06_RS08695 PF00665 Integrase core domain AMD06_RS08695 PF13936 Helix-turn-helix domain AMD06_RS08700 PF13356 Domain of unknown function (DUF4102) AMD06_RS08710 PF01066 CDP-alcohol phosphatidyltransferase AMD06_RS08715 PF01541 GIY-YIG catalytic domain AMD06_RS08715 PF02151 UvrB/uvrC motif AMD06_RS08715 PF08459 UvrC Helix-hairpin-helix N-terminal AMD06_RS08720 PF01436 NHL repeat AMD06_RS08725 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD06_RS08730 PF02348 Cytidylyltransferase AMD06_RS08735 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD06_RS08740 PF00005 ABC transporter AMD06_RS08740 PF00664 ABC transporter transmembrane region AMD06_RS08745 PF02472 Biopolymer transport protein ExbD/TolR AMD06_RS08750 PF01618 AMD06_RS08750 AMD06_RS08755 PF00753 Metallo-beta-lactamase superfamily AMD06_RS08755 PF03772 AMD06_RS08755 AMD06_RS08755 PF13567 AMD06_RS08755 AMD06_RS08760 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS08765 PF00005 ABC transporter AMD06_RS08770 PF02687 AMD06_RS08770 AMD06_RS08770 PF12704 MacB-like periplasmic core domain AMD06_RS08780 PF03937 Flavinator of succinate dehydrogenase AMD06_RS08785 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD06_RS08785 PF13534 4Fe-4S dicluster domain AMD06_RS08795 PF00890 FAD binding domain AMD06_RS08795 PF02910 Fumarate reductase flavoprotein C-term AMD06_RS08800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD06_RS08805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD06_RS08810 PF01571 Aminomethyltransferase folate-binding domain AMD06_RS08810 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD06_RS08815 PF00005 ABC transporter AMD06_RS08815 PF08402 TOBE domain AMD06_RS08820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD06_RS08820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD06_RS08825 PF02685 Glucokinase AMD06_RS08830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD06_RS08835 PF00920 Dehydratase family AMD06_RS08840 PF01081 KDPG and KHG aldolase AMD06_RS08845 PF00873 AcrB/AcrD/AcrF family AMD06_RS08850 PF00873 AcrB/AcrD/AcrF family AMD06_RS08855 PF00529 HlyD family secretion protein AMD06_RS08855 PF16576 AMD06_RS08855 AMD06_RS08860 PF00034 Cytochrome c AMD06_RS08865 PF00034 Cytochrome c AMD06_RS08905 PF00072 Response regulator receiver domain AMD06_RS08905 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS08905 PF01590 GAF domain AMD06_RS08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS08905 PF08447 PAS fold AMD06_RS08905 PF08448 PAS fold AMD06_RS08905 PF13185 GAF domain AMD06_RS08910 PF00575 S1 RNA binding domain AMD06_RS08910 PF09371 Tex-like protein N-terminal domain AMD06_RS08910 PF12836 Helix-hairpin-helix motif AMD06_RS08910 PF16921 AMD06_RS08910 AMD06_RS08920 PF01266 FAD dependent oxidoreductase AMD06_RS08930 PF04024 AMD06_RS08930 AMD06_RS08935 PF00561 alpha/beta hydrolase fold AMD06_RS08940 PF09712 AMD06_RS08940 AMD06_RS08945 PF01066 CDP-alcohol phosphatidyltransferase AMD06_RS08950 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS08955 PF00293 NUDIX domain AMD06_RS08960 PF06853 AMD06_RS08960 AMD06_RS08965 PF03618 AMD06_RS08965 AMD06_RS08970 PF00391 PEP-utilising enzyme, mobile domain AMD06_RS08970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD06_RS08970 PF02896 PEP-utilising enzyme, TIM barrel domain AMD06_RS08975 PF00924 Mechanosensitive ion channel AMD06_RS08980 PF00929 Exonuclease AMD06_RS08985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD06_RS08990 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD06_RS08990 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD06_RS08995 PF01566 AMD06_RS08995 AMD06_RS09000 PF00561 alpha/beta hydrolase fold AMD06_RS09010 PF12804 MobA-like NTP transferase domain AMD06_RS09015 PF00994 Probable molybdopterin binding domain AMD06_RS09015 PF03453 MoeA N-terminal region (domain I and II) AMD06_RS09015 PF03454 MoeA C-terminal region (domain IV) AMD06_RS09020 PF04193 PQ loop repeat AMD06_RS09025 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS09030 PF06884 AMD06_RS09030 AMD06_RS09035 PF00107 Zinc-binding dehydrogenase AMD06_RS09035 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS09035 PF13823 Alcohol dehydrogenase GroES-associated AMD06_RS09045 PF13628 AMD06_RS09045 AMD06_RS09055 PF00593 TonB dependent receptor AMD06_RS09055 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS09060 PF00581 Rhodanese-like domain AMD06_RS09060 PF00899 ThiF family AMD06_RS09065 PF00994 Probable molybdopterin binding domain AMD06_RS09065 PF03453 MoeA N-terminal region (domain I and II) AMD06_RS09065 PF03454 MoeA C-terminal region (domain IV) AMD06_RS09070 PF01926 50S ribosome-binding GTPase AMD06_RS09070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD06_RS09075 PF13360 PQQ-like domain AMD06_RS09080 PF09976 Tetratricopeptide repeat AMD06_RS09085 PF13413 Helix-turn-helix domain AMD06_RS09085 PF13464 AMD06_RS09085 AMD06_RS09090 PF13432 Tetratricopeptide repeat AMD06_RS09095 PF04055 Radical SAM superfamily AMD06_RS09100 PF00334 Nucleoside diphosphate kinase AMD06_RS09105 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS09110 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS09110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD06_RS09110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD06_RS09115 PF00108 Thiolase, N-terminal domain AMD06_RS09115 PF02803 Thiolase, C-terminal domain AMD06_RS09125 PF02537 AMD06_RS09125 AMD06_RS09130 PF00004 ATPase family associated with various cellular activities (AAA) AMD06_RS09130 PF12002 MgsA AAA+ ATPase C terminal AMD06_RS09130 PF16193 AMD06_RS09130 AMD06_RS09140 PF03548 Outer membrane lipoprotein carrier protein LolA AMD06_RS09150 PF01580 FtsK/SpoIIIE family AMD06_RS09150 PF09397 Ftsk gamma domain AMD06_RS09150 PF13491 AMD06_RS09150 AMD06_RS09155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS09160 PF04339 AMD06_RS09160 AMD06_RS09165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD06_RS09170 PF01176 Translation initiation factor 1A / IF-1 AMD06_RS09175 PF00004 ATPase family associated with various cellular activities (AAA) AMD06_RS09175 PF02861 Clp amino terminal domain AMD06_RS09175 PF07724 AAA domain (Cdc48 subfamily) AMD06_RS09175 PF10431 C-terminal, D2-small domain, of ClpB protein AMD06_RS09180 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD06_RS09185 PF00293 NUDIX domain AMD06_RS09190 PF03054 tRNA methyl transferase AMD06_RS09195 PF04356 Protein of unknown function (DUF489) AMD06_RS09200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS09210 PF00563 EAL domain AMD06_RS09210 PF00990 GGDEF domain AMD06_RS09210 PF08447 PAS fold AMD06_RS09210 PF13426 PAS domain AMD06_RS09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS09215 PF07730 Histidine kinase AMD06_RS09215 PF08448 PAS fold AMD06_RS09215 PF13426 PAS domain AMD06_RS09220 PF00072 Response regulator receiver domain AMD06_RS09220 PF00563 EAL domain AMD06_RS09220 PF00990 GGDEF domain AMD06_RS09225 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS09225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS09235 PF04316 Anti-sigma-28 factor, FlgM AMD06_RS09240 PF13144 SAF-like AMD06_RS09245 PF00072 Response regulator receiver domain AMD06_RS09245 PF01584 CheW-like domain AMD06_RS09250 PF00460 Flagella basal body rod protein AMD06_RS09255 PF00460 Flagella basal body rod protein AMD06_RS09255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD06_RS09260 PF03963 AMD06_RS09260 AMD06_RS09260 PF13860 FlgD Ig-like domain AMD06_RS09260 PF13861 FlgD Tudor-like domain AMD06_RS09265 PF00460 Flagella basal body rod protein AMD06_RS09265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD06_RS09265 PF07559 Flagellar basal body protein FlaE AMD06_RS09270 PF00460 Flagella basal body rod protein AMD06_RS09270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD06_RS09275 PF00460 Flagella basal body rod protein AMD06_RS09275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD06_RS09280 PF02107 AMD06_RS09280 AMD06_RS09285 PF02119 AMD06_RS09285 AMD06_RS09290 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD06_RS09290 PF10135 AMD06_RS09290 AMD06_RS09295 PF00460 Flagella basal body rod protein AMD06_RS09295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD06_RS09300 PF00669 Bacterial flagellin N-terminal helical region AMD06_RS09300 PF00700 Bacterial flagellin C-terminal helical region AMD06_RS09305 PF00669 Bacterial flagellin N-terminal helical region AMD06_RS09305 PF00700 Bacterial flagellin C-terminal helical region AMD06_RS09305 PF07196 Flagellin hook IN motif AMD06_RS09310 PF02465 AMD06_RS09310 AMD06_RS09310 PF07195 AMD06_RS09310 AMD06_RS09310 PF07196 Flagellin hook IN motif AMD06_RS09315 PF02561 Flagellar protein FliS AMD06_RS09325 PF16823 AMD06_RS09325 AMD06_RS09330 PF00072 Response regulator receiver domain AMD06_RS09330 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS09335 PF00309 AMD06_RS09335 AMD06_RS09335 PF04552 Sigma-54, DNA binding domain AMD06_RS09335 PF04963 Sigma-54 factor, core binding domain AMD06_RS09340 PF00072 Response regulator receiver domain AMD06_RS09345 PF00158 Sigma-54 interaction domain AMD06_RS09345 PF02954 Bacterial regulatory protein, Fis family AMD06_RS09345 PF06490 AMD06_RS09345 AMD06_RS09350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD06_RS09360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD06_RS09360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD06_RS09365 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS09370 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS09375 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS09375 PF14602 Hexapeptide repeat of succinyl-transferase AMD06_RS09380 PF00355 Rieske [2Fe-2S] domain AMD06_RS09380 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMD06_RS09385 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS09390 PF05050 Methyltransferase FkbM domain AMD06_RS09395 PF00535 Glycosyl transferase family 2 AMD06_RS09400 PF02049 AMD06_RS09400 AMD06_RS09405 PF01514 Secretory protein of YscJ/FliF family AMD06_RS09405 PF08345 AMD06_RS09405 AMD06_RS09410 PF01706 FliG C-terminal domain AMD06_RS09410 PF14841 FliG middle domain AMD06_RS09410 PF14842 FliG N-terminal domain AMD06_RS09415 PF02108 AMD06_RS09415 AMD06_RS09420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD06_RS09425 PF02050 Flagellar FliJ protein AMD06_RS09430 PF02120 Flagellar hook-length control protein FliK AMD06_RS09435 PF03748 AMD06_RS09435 AMD06_RS09440 PF01052 Surface presentation of antigens (SPOA) AMD06_RS09440 PF02154 Flagellar motor switch protein FliM AMD06_RS09445 PF01052 Surface presentation of antigens (SPOA) AMD06_RS09450 PF04347 AMD06_RS09450 AMD06_RS09455 PF00813 AMD06_RS09455 AMD06_RS09465 PF01313 AMD06_RS09465 AMD06_RS09470 PF01311 AMD06_RS09470 AMD06_RS09475 PF00990 GGDEF domain AMD06_RS09475 PF07494 Two component regulator propeller AMD06_RS09475 PF07495 Y_Y_Y domain AMD06_RS09480 PF07495 Y_Y_Y domain AMD06_RS09485 PF00990 GGDEF domain AMD06_RS09490 PF00563 EAL domain AMD06_RS09490 PF00990 GGDEF domain AMD06_RS09490 PF03707 AMD06_RS09490 AMD06_RS09495 PF01312 FlhB HrpN YscU SpaS Family AMD06_RS09500 PF00771 FHIPEP family AMD06_RS09505 PF00448 SRP54-type protein, GTPase domain AMD06_RS09510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD06_RS09515 PF04539 Sigma-70 region 3 AMD06_RS09515 PF04542 Sigma-70 region 2 AMD06_RS09515 PF04545 Sigma-70, region 4 AMD06_RS09520 PF00072 Response regulator receiver domain AMD06_RS09525 PF04344 Chemotaxis phosphatase, CheZ AMD06_RS09530 PF01584 CheW-like domain AMD06_RS09530 PF01627 Hpt domain AMD06_RS09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS09530 PF02895 Signal transducing histidine kinase, homodimeric domain AMD06_RS09540 PF04055 Radical SAM superfamily AMD06_RS09540 PF13353 4Fe-4S single cluster domain AMD06_RS09550 PF01381 Helix-turn-helix AMD06_RS09555 PF13683 AMD06_RS09555 AMD06_RS09560 PF01527 Transposase AMD06_RS09565 PF00665 Integrase core domain AMD06_RS09565 PF13276 AMD06_RS09565 AMD06_RS09580 PF00665 Integrase core domain AMD06_RS09580 PF13936 Helix-turn-helix domain AMD06_RS09585 PF01695 IstB-like ATP binding protein AMD06_RS09610 PF00580 UvrD/REP helicase N-terminal domain AMD06_RS09610 PF13361 UvrD-like helicase C-terminal domain AMD06_RS09635 PF09686 AMD06_RS09635 AMD06_RS09640 PF11660 AMD06_RS09640 AMD06_RS09645 PF11190 AMD06_RS09645 AMD06_RS09650 PF11990 AMD06_RS09650 AMD06_RS09655 PF11444 AMD06_RS09655 AMD06_RS09660 PF11920 AMD06_RS09660 AMD06_RS09675 PF11130 AMD06_RS09675 AMD06_RS09680 PF13462 Thioredoxin AMD06_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS09685 PF03466 LysR substrate binding domain AMD06_RS09690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD06_RS09690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD06_RS09695 PF03401 Tripartite tricarboxylate transporter family receptor AMD06_RS09700 PF06684 Amino acid synthesis AMD06_RS09710 PF04002 RadC-like JAB domain AMD06_RS09715 PF07511 AMD06_RS09715 AMD06_RS09720 PF06834 AMD06_RS09720 AMD06_RS09730 PF01507 Phosphoadenosine phosphosulfate reductase family AMD06_RS09740 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD06_RS09745 PF00589 Phage integrase family AMD06_RS09745 PF13356 Domain of unknown function (DUF4102) AMD06_RS09745 PF14659 Phage integrase, N-terminal SAM-like domain AMD06_RS09750 PF00117 Glutamine amidotransferase class-I AMD06_RS09750 PF00958 GMP synthase C terminal domain AMD06_RS09750 PF02540 NAD synthase AMD06_RS09755 PF00478 IMP dehydrogenase / GMP reductase domain AMD06_RS09755 PF00571 CBS domain AMD06_RS09760 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD06_RS09760 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD06_RS09765 PF06844 Protein of unknown function (DUF1244) AMD06_RS09770 PF00999 Sodium/hydrogen exchanger family AMD06_RS09770 PF02254 TrkA-N domain AMD06_RS09775 PF00483 Nucleotidyl transferase AMD06_RS09780 PF02719 Polysaccharide biosynthesis protein AMD06_RS09780 PF13727 CoA-binding domain AMD06_RS09785 PF00953 Glycosyl transferase family 4 AMD06_RS09790 PF13432 Tetratricopeptide repeat AMD06_RS09795 PF06305 AMD06_RS09795 AMD06_RS09800 PF00216 Bacterial DNA-binding protein AMD06_RS09805 PF00575 S1 RNA binding domain AMD06_RS09810 PF02224 Cytidylate kinase AMD06_RS09815 PF00444 Ribosomal protein L36 AMD06_RS09825 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD06_RS09830 PF00795 Carbon-nitrogen hydrolase AMD06_RS09835 PF13420 Acetyltransferase (GNAT) domain AMD06_RS09840 PF01963 AMD06_RS09840 AMD06_RS09845 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS09850 PF00754 F5/8 type C domain AMD06_RS09850 PF06202 Amylo-alpha-1,6-glucosidase AMD06_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS09860 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS09865 PF13416 Bacterial extracellular solute-binding protein AMD06_RS09870 PF10091 Putative glucoamylase AMD06_RS09875 PF13620 Carboxypeptidase regulatory-like domain AMD06_RS09880 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS09880 PF13377 Periplasmic binding protein-like domain AMD06_RS09885 PF01722 BolA-like protein AMD06_RS09890 PF03795 YCII-related domain AMD06_RS09895 PF02616 ScpA/B protein AMD06_RS09900 PF04079 Putative transcriptional regulators (Ypuh-like) AMD06_RS09905 PF00849 RNA pseudouridylate synthase AMD06_RS09905 PF01479 S4 domain AMD06_RS09915 PF05096 Glutamine cyclotransferase AMD06_RS09920 PF00795 Carbon-nitrogen hydrolase AMD06_RS09925 PF00155 Aminotransferase class I and II AMD06_RS09930 PF00005 ABC transporter AMD06_RS09935 PF03379 AMD06_RS09935 AMD06_RS09940 PF01578 AMD06_RS09940 AMD06_RS09945 PF04995 AMD06_RS09945 AMD06_RS09950 PF03100 CcmE AMD06_RS09955 PF01578 AMD06_RS09955 AMD06_RS09955 PF16327 AMD06_RS09955 AMD06_RS09960 PF08534 Redoxin AMD06_RS09965 PF03918 Cytochrome C biogenesis protein AMD06_RS09970 PF13432 Tetratricopeptide repeat AMD06_RS09975 PF00561 alpha/beta hydrolase fold AMD06_RS09980 PF00313 'Cold-shock' DNA-binding domain AMD06_RS09980 PF06961 AMD06_RS09980 AMD06_RS09985 PF00005 ABC transporter AMD06_RS09985 PF00664 ABC transporter transmembrane region AMD06_RS09990 PF00005 ABC transporter AMD06_RS09990 PF00664 ABC transporter transmembrane region AMD06_RS09995 PF01654 AMD06_RS09995 AMD06_RS10000 PF02322 AMD06_RS10000 AMD06_RS10005 PF08173 AMD06_RS10005 AMD06_RS10015 PF07690 Major Facilitator Superfamily AMD06_RS10020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD06_RS10020 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD06_RS10025 PF00171 Aldehyde dehydrogenase family AMD06_RS10030 PF00696 Amino acid kinase family AMD06_RS10030 PF01472 PUA domain AMD06_RS10035 PF03795 YCII-related domain AMD06_RS10040 PF00206 Lyase AMD06_RS10045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD06_RS10050 PF13302 Acetyltransferase (GNAT) domain AMD06_RS10055 PF00696 Amino acid kinase family AMD06_RS10055 PF04768 Protein of unknown function (DUF619) AMD06_RS10060 PF01546 Peptidase family M20/M25/M40 AMD06_RS10060 PF07687 Peptidase dimerisation domain AMD06_RS10065 PF00583 Acetyltransferase (GNAT) family AMD06_RS10070 PF00764 Arginosuccinate synthase AMD06_RS10075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD06_RS10075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD06_RS10085 PF01406 tRNA synthetases class I (C) catalytic domain AMD06_RS10085 PF09190 DALR domain AMD06_RS10090 PF02657 Fe-S metabolism associated domain AMD06_RS10095 PF05977 Transmembrane secretion effector AMD06_RS10100 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD06_RS10110 PF01809 AMD06_RS10110 AMD06_RS10115 PF01979 Amidohydrolase family AMD06_RS10120 PF01551 Peptidase family M23 AMD06_RS10125 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS10130 PF13520 Amino acid permease AMD06_RS10135 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD06_RS10140 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD06_RS10150 PF00753 Metallo-beta-lactamase superfamily AMD06_RS10155 PF16242 AMD06_RS10155 AMD06_RS10170 PF01527 Transposase AMD06_RS10175 PF00295 Glycosyl hydrolases family 28 AMD06_RS10185 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS10190 PF13489 Methyltransferase domain AMD06_RS10195 PF01979 Amidohydrolase family AMD06_RS10205 PF01132 Elongation factor P (EF-P) OB domain AMD06_RS10205 PF08207 Elongation factor P (EF-P) KOW-like domain AMD06_RS10205 PF09285 Elongation factor P, C-terminal AMD06_RS10210 PF13353 4Fe-4S single cluster domain AMD06_RS10215 PF00563 EAL domain AMD06_RS10215 PF00672 HAMP domain AMD06_RS10215 PF00990 GGDEF domain AMD06_RS10215 PF17203 AMD06_RS10215 AMD06_RS10220 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein AMD06_RS10225 PF00588 SpoU rRNA Methylase family AMD06_RS10230 PF00459 Inositol monophosphatase family AMD06_RS10235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD06_RS10235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD06_RS10240 PF00545 ribonuclease AMD06_RS10245 PF01337 Barstar (barnase inhibitor) AMD06_RS10250 PF00005 ABC transporter AMD06_RS10250 PF12848 ABC transporter AMD06_RS10250 PF16326 AMD06_RS10250 AMD06_RS10255 PF00270 DEAD/DEAH box helicase AMD06_RS10255 PF00271 Helicase conserved C-terminal domain AMD06_RS10255 PF03880 DbpA RNA binding domain AMD06_RS10260 PF00156 Phosphoribosyl transferase domain AMD06_RS10265 PF02696 AMD06_RS10265 AMD06_RS10270 PF07859 alpha/beta hydrolase fold AMD06_RS10275 PF00043 Glutathione S-transferase, C-terminal domain AMD06_RS10275 PF02798 Glutathione S-transferase, N-terminal domain AMD06_RS10280 PF00313 'Cold-shock' DNA-binding domain AMD06_RS10285 PF07152 YaeQ protein AMD06_RS10290 PF03486 HI0933-like protein AMD06_RS10295 PF00563 EAL domain AMD06_RS10295 PF00990 GGDEF domain AMD06_RS10295 PF13188 PAS domain AMD06_RS10300 PF01435 Peptidase family M48 AMD06_RS10305 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD06_RS10310 PF00106 short chain dehydrogenase AMD06_RS10315 PF05233 AMD06_RS10315 AMD06_RS10315 PF07879 AMD06_RS10315 AMD06_RS10320 PF01963 AMD06_RS10320 AMD06_RS10325 PF07920 Protein of unknown function (DUF1684) AMD06_RS10330 PF01119 DNA mismatch repair protein, C-terminal domain AMD06_RS10330 PF08676 MutL C terminal dimerisation domain AMD06_RS10330 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS10335 PF01520 N-acetylmuramoyl-L-alanine amidase AMD06_RS10335 PF11741 AMIN domain AMD06_RS10340 PF02367 Uncharacterised P-loop hydrolase UPF0079 AMD06_RS10345 PF01256 Carbohydrate kinase AMD06_RS10345 PF03853 YjeF-related protein N-terminus AMD06_RS10350 PF08331 AMD06_RS10350 AMD06_RS10350 PF13484 AMD06_RS10350 AMD06_RS10355 PF02601 AMD06_RS10355 AMD06_RS10355 PF13742 AMD06_RS10355 AMD06_RS10360 PF06057 Bacterial virulence protein (VirJ) AMD06_RS10365 PF03781 Sulfatase-modifying factor enzyme 1 AMD06_RS10370 PF00570 HRDC domain AMD06_RS10370 PF01612 3'-5' exonuclease AMD06_RS10375 PF01068 ATP dependent DNA ligase domain AMD06_RS10375 PF04679 ATP dependent DNA ligase C terminal region AMD06_RS10375 PF13298 DNA polymerase Ligase (LigD) AMD06_RS10380 PF12244 AMD06_RS10380 AMD06_RS10385 PF00816 H-NS histone family AMD06_RS10395 PF00589 Phage integrase family AMD06_RS10420 PF01609 Transposase DDE domain AMD06_RS10420 PF05598 AMD06_RS10420 AMD06_RS10425 PF00665 Integrase core domain AMD06_RS10430 PF01527 Transposase AMD06_RS10445 PF05016 Plasmid stabilisation system protein AMD06_RS10450 PF01402 Ribbon-helix-helix protein, copG family AMD06_RS10455 PF01526 AMD06_RS10455 AMD06_RS10465 PF00665 Integrase core domain AMD06_RS10465 PF13276 AMD06_RS10465 AMD06_RS10470 PF00239 Resolvase, N terminal domain AMD06_RS10475 PF13166 AMD06_RS10475 AMD06_RS10485 PF02384 N-6 DNA Methylase AMD06_RS10490 PF09572 AMD06_RS10490 AMD06_RS10500 PF07929 Plasmid pRiA4b ORF-3-like protein AMD06_RS10515 PF04796 AMD06_RS10515 AMD06_RS10525 PF13289 AMD06_RS10525 AMD06_RS10530 PF01935 Domain of unknown function DUF87 AMD06_RS10540 PF00990 GGDEF domain AMD06_RS10545 PF01584 CheW-like domain AMD06_RS10550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS10550 PF00672 HAMP domain AMD06_RS10550 PF12729 AMD06_RS10550 AMD06_RS10555 PF02245 Methylpurine-DNA glycosylase (MPG) AMD06_RS10560 PF00270 DEAD/DEAH box helicase AMD06_RS10560 PF00271 Helicase conserved C-terminal domain AMD06_RS10560 PF08494 AMD06_RS10560 AMD06_RS10565 PF11743 AMD06_RS10565 AMD06_RS10575 PF04386 Stringent starvation protein B AMD06_RS10580 PF00043 Glutathione S-transferase, C-terminal domain AMD06_RS10580 PF13417 Glutathione S-transferase, N-terminal domain AMD06_RS10585 PF02167 Cytochrome C1 family AMD06_RS10590 PF00032 Cytochrome b(C-terminal)/b6/petD AMD06_RS10590 PF00033 Cytochrome b(N-terminal)/b6/petB AMD06_RS10595 PF00355 Rieske [2Fe-2S] domain AMD06_RS10595 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD06_RS10600 PF01464 Transglycosylase SLT domain AMD06_RS10605 PF08279 HTH domain AMD06_RS10605 PF13280 AMD06_RS10605 AMD06_RS10610 PF02798 Glutathione S-transferase, N-terminal domain AMD06_RS10615 PF00919 Uncharacterized protein family UPF0004 AMD06_RS10615 PF01938 TRAM domain AMD06_RS10615 PF04055 Radical SAM superfamily AMD06_RS10620 PF02562 PhoH-like protein AMD06_RS10630 PF02130 Uncharacterized protein family UPF0054 AMD06_RS10640 PF00571 CBS domain AMD06_RS10640 PF03471 Transporter associated domain AMD06_RS10645 PF13387 AMD06_RS10645 AMD06_RS10650 PF01544 CorA-like Mg2+ transporter protein AMD06_RS10655 PF00171 Aldehyde dehydrogenase family AMD06_RS10665 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS10670 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS10675 PF00005 ABC transporter AMD06_RS10675 PF08402 TOBE domain AMD06_RS10680 PF02321 Outer membrane efflux protein AMD06_RS10685 PF07690 Major Facilitator Superfamily AMD06_RS10690 PF13533 Biotin-lipoyl like AMD06_RS10690 PF16576 AMD06_RS10690 AMD06_RS10695 PF13416 Bacterial extracellular solute-binding protein AMD06_RS10700 PF00202 Aminotransferase class-III AMD06_RS10705 PF00120 Glutamine synthetase, catalytic domain AMD06_RS10710 PF07722 Peptidase C26 AMD06_RS10715 PF00120 Glutamine synthetase, catalytic domain AMD06_RS10720 PF01266 FAD dependent oxidoreductase AMD06_RS10725 PF00072 Response regulator receiver domain AMD06_RS10725 PF00990 GGDEF domain AMD06_RS10730 PF01814 Hemerythrin HHE cation binding domain AMD06_RS10735 PF00083 Sugar (and other) transporter AMD06_RS10735 PF07690 Major Facilitator Superfamily AMD06_RS10745 PF00384 Molybdopterin oxidoreductase AMD06_RS10745 PF01568 Molydopterin dinucleotide binding domain AMD06_RS10750 PF02634 FdhD/NarQ family AMD06_RS10755 PF07690 Major Facilitator Superfamily AMD06_RS10765 PF00202 Aminotransferase class-III AMD06_RS10775 PF04286 AMD06_RS10775 AMD06_RS10780 PF00072 Response regulator receiver domain AMD06_RS10780 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS10780 PF01627 Hpt domain AMD06_RS10780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS10780 PF03924 CHASE domain AMD06_RS10780 PF13426 PAS domain AMD06_RS10785 PF00072 Response regulator receiver domain AMD06_RS10785 PF13487 HD domain AMD06_RS10790 PF07690 Major Facilitator Superfamily AMD06_RS10795 PF05088 AMD06_RS10795 AMD06_RS10795 PF12466 AMD06_RS10795 AMD06_RS10800 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS10805 PF16576 AMD06_RS10805 AMD06_RS10810 PF00873 AcrB/AcrD/AcrF family AMD06_RS10815 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS10815 PF13377 Periplasmic binding protein-like domain AMD06_RS10820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD06_RS10820 PF00381 PTS HPr component phosphorylation site AMD06_RS10820 PF00391 PEP-utilising enzyme, mobile domain AMD06_RS10820 PF02896 PEP-utilising enzyme, TIM barrel domain AMD06_RS10820 PF05524 PEP-utilising enzyme, N-terminal AMD06_RS10825 PF00294 pfkB family carbohydrate kinase AMD06_RS10830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD06_RS10835 PF04966 Carbohydrate-selective porin, OprB family AMD06_RS10850 PF07791 AMD06_RS10850 AMD06_RS10865 PF02355 Protein export membrane protein AMD06_RS10865 PF07549 SecD/SecF GG Motif AMD06_RS10870 PF02355 Protein export membrane protein AMD06_RS10870 PF07549 SecD/SecF GG Motif AMD06_RS10870 PF13721 SecD export protein N-terminal TM region AMD06_RS10875 PF02699 Preprotein translocase subunit AMD06_RS10880 PF01702 Queuine tRNA-ribosyltransferase AMD06_RS10885 PF02547 Queuosine biosynthesis protein AMD06_RS10890 PF01037 AsnC family AMD06_RS10890 PF13412 Winged helix-turn-helix DNA-binding AMD06_RS10900 PF00202 Aminotransferase class-III AMD06_RS10905 PF04488 Glycosyltransferase sugar-binding region containing DXD motif AMD06_RS10910 PF00149 Calcineurin-like phosphoesterase AMD06_RS10910 PF16656 AMD06_RS10910 AMD06_RS10915 PF02333 Phytase AMD06_RS10920 PF00593 TonB dependent receptor AMD06_RS10920 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS10925 PF14681 Uracil phosphoribosyltransferase AMD06_RS10930 PF00759 Glycosyl hydrolase family 9 AMD06_RS10930 PF02927 N-terminal ig-like domain of cellulase AMD06_RS10940 PF01019 Gamma-glutamyltranspeptidase AMD06_RS10945 PF00037 4Fe-4S binding domain AMD06_RS10960 PF01467 Cytidylyltransferase AMD06_RS10965 PF03602 Conserved hypothetical protein 95 AMD06_RS10970 PF00183 Hsp90 protein AMD06_RS10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS10975 PF05593 AMD06_RS10975 AMD06_RS10975 PF14220 AMD06_RS10975 AMD06_RS10980 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMD06_RS10985 PF00593 TonB dependent receptor AMD06_RS10985 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS10990 PF00326 Prolyl oligopeptidase family AMD06_RS10990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD06_RS10995 PF04616 Glycosyl hydrolases family 43 AMD06_RS11000 PF00754 F5/8 type C domain AMD06_RS11000 PF07532 AMD06_RS11000 AMD06_RS11005 PF00593 TonB dependent receptor AMD06_RS11005 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS11015 PF00082 Subtilase family AMD06_RS11015 PF09286 Pro-kumamolisin, activation domain AMD06_RS11030 PF01301 Glycosyl hydrolases family 35 AMD06_RS11035 PF00326 Prolyl oligopeptidase family AMD06_RS11035 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD06_RS11040 PF13520 Amino acid permease AMD06_RS11045 PF05960 Bacterial protein of unknown function (DUF885) AMD06_RS11050 PF05960 Bacterial protein of unknown function (DUF885) AMD06_RS11055 PF00557 Metallopeptidase family M24 AMD06_RS11055 PF01321 Creatinase/Prolidase N-terminal domain AMD06_RS11060 PF00171 Aldehyde dehydrogenase family AMD06_RS11065 PF00701 Dihydrodipicolinate synthetase family AMD06_RS11070 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS11075 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD06_RS11080 PF01266 FAD dependent oxidoreductase AMD06_RS11085 PF05544 Proline racemase AMD06_RS11090 PF08448 PAS fold AMD06_RS11090 PF12833 Helix-turn-helix domain AMD06_RS11095 PF00448 SRP54-type protein, GTPase domain AMD06_RS11095 PF02881 SRP54-type protein, helical bundle domain AMD06_RS11100 PF00633 Helix-hairpin-helix motif AMD06_RS11100 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD06_RS11100 PF14815 NUDIX domain AMD06_RS11105 PF04362 Bacterial Fe(2+) trafficking AMD06_RS11110 PF00072 Response regulator receiver domain AMD06_RS11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS11110 PF13426 PAS domain AMD06_RS11120 PF10685 AMD06_RS11120 AMD06_RS11140 PF08212 Lipocalin-like domain AMD06_RS11145 PF03168 Late embryogenesis abundant protein AMD06_RS11150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS11150 PF02770 Acyl-CoA dehydrogenase, middle domain AMD06_RS11150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD06_RS11150 PF12418 AMD06_RS11150 AMD06_RS11150 PF12806 AMD06_RS11150 AMD06_RS11155 PF14279 AMD06_RS11155 AMD06_RS11160 PF02779 Transketolase, pyrimidine binding domain AMD06_RS11160 PF02780 Transketolase, C-terminal domain AMD06_RS11160 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD06_RS11165 PF04101 Glycosyltransferase family 28 C-terminal domain AMD06_RS11175 PF13506 Glycosyl transferase family 21 AMD06_RS11180 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS11185 PF00753 Metallo-beta-lactamase superfamily AMD06_RS11190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD06_RS11190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD06_RS11195 PF01963 AMD06_RS11195 AMD06_RS11200 PF06172 Cupin superfamily (DUF985) AMD06_RS11205 PF03808 AMD06_RS11205 AMD06_RS11210 PF04230 AMD06_RS11210 AMD06_RS11220 PF13440 AMD06_RS11220 AMD06_RS11225 PF13692 Glycosyl transferases group 1 AMD06_RS11230 PF00534 Glycosyl transferases group 1 AMD06_RS11230 PF13439 Glycosyltransferase Family 4 AMD06_RS11235 PF01757 AMD06_RS11235 AMD06_RS11240 PF01757 AMD06_RS11240 AMD06_RS11250 PF02397 AMD06_RS11250 AMD06_RS11250 PF13727 CoA-binding domain AMD06_RS11255 PF02706 Chain length determinant protein AMD06_RS11255 PF13807 AMD06_RS11255 AMD06_RS11260 PF02563 Polysaccharide biosynthesis/export protein AMD06_RS11260 PF10531 SLBB domain AMD06_RS11270 PF13411 MerR HTH family regulatory protein AMD06_RS11275 PF00216 Bacterial DNA-binding protein AMD06_RS11280 PF01588 Putative tRNA binding domain AMD06_RS11280 PF03147 Ferredoxin-fold anticodon binding domain AMD06_RS11280 PF03483 B3/4 domain AMD06_RS11280 PF03484 tRNA synthetase B5 domain AMD06_RS11285 PF01409 tRNA synthetases class II core domain (F) AMD06_RS11285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD06_RS11290 PF00453 Ribosomal protein L20 AMD06_RS11295 PF01632 Ribosomal protein L35 AMD06_RS11300 PF00707 Translation initiation factor IF-3, C-terminal domain AMD06_RS11300 PF05198 Translation initiation factor IF-3, N-terminal domain AMD06_RS11305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD06_RS11305 PF02824 TGS domain AMD06_RS11305 PF03129 Anticodon binding domain AMD06_RS11305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD06_RS11310 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS11310 PF13377 Periplasmic binding protein-like domain AMD06_RS11315 PF00128 Alpha amylase, catalytic domain AMD06_RS11320 PF07690 Major Facilitator Superfamily AMD06_RS11325 PF06202 Amylo-alpha-1,6-glucosidase AMD06_RS11330 PF10566 Glycoside hydrolase 97 AMD06_RS11330 PF14508 Glycosyl-hydrolase 97 N-terminal AMD06_RS11330 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD06_RS11340 PF00593 TonB dependent receptor AMD06_RS11340 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS11345 PF00128 Alpha amylase, catalytic domain AMD06_RS11350 PF01527 Transposase AMD06_RS11355 PF13683 AMD06_RS11355 AMD06_RS11360 PF05231 AMD06_RS11360 AMD06_RS11365 PF00083 Sugar (and other) transporter AMD06_RS11375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD06_RS11375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD06_RS11380 PF14498 Glycosyl hydrolase family 65, N-terminal domain AMD06_RS11385 PF01055 Glycosyl hydrolases family 31 AMD06_RS11385 PF07691 PA14 domain AMD06_RS11385 PF16338 AMD06_RS11385 AMD06_RS11385 PF17137 AMD06_RS11385 AMD06_RS11390 PF02449 Beta-galactosidase AMD06_RS11395 PF03629 Domain of unknown function (DUF303) AMD06_RS11395 PF13364 Beta-galactosidase jelly roll domain AMD06_RS11405 PF00593 TonB dependent receptor AMD06_RS11405 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS11410 PF00593 TonB dependent receptor AMD06_RS11410 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS11415 PF03466 LysR substrate binding domain AMD06_RS11425 PF01081 KDPG and KHG aldolase AMD06_RS11430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD06_RS11430 PF13378 Enolase C-terminal domain-like AMD06_RS11435 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD06_RS11440 PF05035 2-keto-3-deoxy-galactonokinase AMD06_RS11445 PF00037 4Fe-4S binding domain AMD06_RS11445 PF11953 Domain of unknown function (DUF3470) AMD06_RS11455 PF00701 Dihydrodipicolinate synthetase family AMD06_RS11460 PF13740 ACT domain AMD06_RS11465 PF06877 Regulator of ribonuclease activity B AMD06_RS11470 PF00578 AhpC/TSA family AMD06_RS11475 PF02562 PhoH-like protein AMD06_RS11475 PF13638 PIN domain AMD06_RS11485 PF06912 AMD06_RS11485 AMD06_RS11490 PF08543 Phosphomethylpyrimidine kinase AMD06_RS11495 PF12146 Putative lysophospholipase AMD06_RS11510 PF00581 Rhodanese-like domain AMD06_RS11510 PF09335 AMD06_RS11510 AMD06_RS11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS11515 PF03466 LysR substrate binding domain AMD06_RS11525 PF02678 Pirin AMD06_RS11530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS11530 PF08447 PAS fold AMD06_RS11530 PF08448 PAS fold AMD06_RS11540 PF02599 Global regulator protein family AMD06_RS11545 PF01411 tRNA synthetases class II (A) AMD06_RS11545 PF02272 DHHA1 domain AMD06_RS11545 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD06_RS11550 PF02631 RecX family AMD06_RS11555 PF00154 recA bacterial DNA recombination protein AMD06_RS11560 PF00717 Peptidase S24-like AMD06_RS11560 PF01726 LexA DNA binding domain AMD06_RS11565 PF03109 AMD06_RS11565 AMD06_RS11570 PF02464 Competence-damaged protein AMD06_RS11575 PF01926 50S ribosome-binding GTPase AMD06_RS11575 PF13167 AMD06_RS11575 AMD06_RS11575 PF16360 AMD06_RS11575 AMD06_RS11585 PF01715 IPP transferase AMD06_RS11590 PF00809 Pterin binding enzyme AMD06_RS11595 PF00004 ATPase family associated with various cellular activities (AAA) AMD06_RS11595 PF01434 Peptidase family M41 AMD06_RS11595 PF06480 FtsH Extracellular AMD06_RS11600 PF01728 FtsJ-like methyltransferase AMD06_RS11605 PF01985 CRS1 / YhbY (CRM) domain AMD06_RS11610 PF04430 Protein of unknown function (DUF498/DUF598) AMD06_RS11615 PF01476 LysM domain AMD06_RS11615 PF01551 Peptidase family M23 AMD06_RS11625 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD06_RS11630 PF01975 Survival protein SurE AMD06_RS11635 PF01713 Smr domain AMD06_RS11640 PF01142 tRNA pseudouridine synthase D (TruD) AMD06_RS11645 PF02542 YgbB family AMD06_RS11650 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD06_RS11655 PF04977 Septum formation initiator AMD06_RS11660 PF00113 Enolase, C-terminal TIM barrel domain AMD06_RS11660 PF03952 Enolase, N-terminal domain AMD06_RS11670 PF00793 DAHP synthetase I family AMD06_RS11675 PF00117 Glutamine amidotransferase class-I AMD06_RS11675 PF06418 CTP synthase N-terminus AMD06_RS11685 PF00204 DNA gyrase B AMD06_RS11685 PF00986 DNA gyrase B subunit, carboxyl terminus AMD06_RS11685 PF01751 Toprim domain AMD06_RS11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS11690 PF00450 Serine carboxypeptidase AMD06_RS11695 PF02698 DUF218 domain AMD06_RS11700 PF01384 AMD06_RS11700 AMD06_RS11705 PF01865 Protein of unknown function DUF47 AMD06_RS11710 PF00571 CBS domain AMD06_RS11710 PF01595 AMD06_RS11710 AMD06_RS11710 PF03471 Transporter associated domain AMD06_RS11715 PF06055 AMD06_RS11715 AMD06_RS11720 PF16242 AMD06_RS11720 AMD06_RS11725 PF00296 Luciferase-like monooxygenase AMD06_RS11730 PF00083 Sugar (and other) transporter AMD06_RS11735 PF00005 ABC transporter AMD06_RS11735 PF00664 ABC transporter transmembrane region AMD06_RS11745 PF04055 Radical SAM superfamily AMD06_RS11750 PF14907 Uncharacterised nucleotidyltransferase AMD06_RS11755 PF00534 Glycosyl transferases group 1 AMD06_RS11755 PF13579 Glycosyl transferase 4-like domain AMD06_RS11760 PF00534 Glycosyl transferases group 1 AMD06_RS11760 PF13439 Glycosyltransferase Family 4 AMD06_RS11765 PF08241 Methyltransferase domain AMD06_RS11770 PF01979 Amidohydrolase family AMD06_RS11775 PF13649 Methyltransferase domain AMD06_RS11780 PF02706 Chain length determinant protein AMD06_RS11790 PF00535 Glycosyl transferase family 2 AMD06_RS11795 PF13440 AMD06_RS11795 AMD06_RS11800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD06_RS11805 PF13480 Acetyltransferase (GNAT) domain AMD06_RS11815 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS11820 PF05523 WxcM-like, C-terminal AMD06_RS11825 PF01292 Prokaryotic cytochrome b561 AMD06_RS11835 PF00034 Cytochrome c AMD06_RS11850 PF04542 Sigma-70 region 2 AMD06_RS11850 PF08281 Sigma-70, region 4 AMD06_RS11860 PF00082 Subtilase family AMD06_RS11865 PF01578 AMD06_RS11865 AMD06_RS11870 PF04995 AMD06_RS11870 AMD06_RS11875 PF03100 CcmE AMD06_RS11880 PF01578 AMD06_RS11880 AMD06_RS11880 PF16327 AMD06_RS11880 AMD06_RS11885 PF00578 AhpC/TSA family AMD06_RS11890 PF03918 Cytochrome C biogenesis protein AMD06_RS11900 PF00072 Response regulator receiver domain AMD06_RS11900 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS11900 PF08448 PAS fold AMD06_RS11905 PF06745 KaiC AMD06_RS11910 PF00072 Response regulator receiver domain AMD06_RS11915 PF00072 Response regulator receiver domain AMD06_RS11915 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS11915 PF00989 PAS fold AMD06_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS11915 PF08447 PAS fold AMD06_RS11915 PF08448 PAS fold AMD06_RS11930 PF01047 MarR family AMD06_RS11935 PF01494 FAD binding domain AMD06_RS11940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS11940 PF00672 HAMP domain AMD06_RS11940 PF12729 AMD06_RS11940 AMD06_RS11945 PF04343 AMD06_RS11945 AMD06_RS11950 PF00589 Phage integrase family AMD06_RS11950 PF13356 Domain of unknown function (DUF4102) AMD06_RS11955 PF02399 AMD06_RS11955 AMD06_RS11965 PF01527 Transposase AMD06_RS11970 PF13560 Helix-turn-helix domain AMD06_RS11975 PF05284 AMD06_RS11975 AMD06_RS11980 PF04002 RadC-like JAB domain AMD06_RS11985 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD06_RS11995 PF08843 Nucleotidyl transferase of unknown function (DUF1814) AMD06_RS12000 PF11459 AMD06_RS12000 AMD06_RS12000 PF17194 AMD06_RS12000 AMD06_RS12005 PF00589 Phage integrase family AMD06_RS12005 PF13356 Domain of unknown function (DUF4102) AMD06_RS12005 PF14659 Phage integrase, N-terminal SAM-like domain AMD06_RS12020 PF00593 TonB dependent receptor AMD06_RS12020 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS12025 PF07916 AMD06_RS12025 AMD06_RS12030 PF01850 PIN domain AMD06_RS12035 PF04014 Antidote-toxin recognition MazE AMD06_RS12040 PF16263 AMD06_RS12040 AMD06_RS12050 PF04542 Sigma-70 region 2 AMD06_RS12050 PF08281 Sigma-70, region 4 AMD06_RS12055 PF04773 FecR protein AMD06_RS12055 PF16220 AMD06_RS12055 AMD06_RS12060 PF00593 TonB dependent receptor AMD06_RS12060 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS12070 PF10947 AMD06_RS12070 AMD06_RS12075 PF07514 Putative helicase AMD06_RS12075 PF07515 Protein of unknown function (DUF1528) AMD06_RS12080 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD06_RS12080 PF05345 Putative Ig domain AMD06_RS12080 PF06594 AMD06_RS12080 AMD06_RS12090 PF13437 HlyD family secretion protein AMD06_RS12090 PF13533 Biotin-lipoyl like AMD06_RS12095 PF00005 ABC transporter AMD06_RS12095 PF00664 ABC transporter transmembrane region AMD06_RS12100 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD06_RS12105 PF13614 AAA domain AMD06_RS12120 PF11198 AMD06_RS12120 AMD06_RS12130 PF08900 AMD06_RS12130 AMD06_RS12140 PF00436 Single-strand binding protein family AMD06_RS12150 PF00145 C-5 cytosine-specific DNA methylase AMD06_RS12160 PF13304 AAA domain AMD06_RS12190 PF11284 AMD06_RS12190 AMD06_RS12195 PF00589 Phage integrase family AMD06_RS12195 PF13356 Domain of unknown function (DUF4102) AMD06_RS12195 PF14659 Phage integrase, N-terminal SAM-like domain AMD06_RS12200 PF06250 AMD06_RS12200 AMD06_RS12205 PF01527 Transposase AMD06_RS12215 PF13333 AMD06_RS12215 AMD06_RS12230 PF01695 IstB-like ATP binding protein AMD06_RS12245 PF01609 Transposase DDE domain AMD06_RS12255 PF08845 AMD06_RS12255 AMD06_RS12270 PF00069 Protein kinase domain AMD06_RS12275 PF00593 TonB dependent receptor AMD06_RS12275 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS12285 PF01618 AMD06_RS12285 AMD06_RS12290 PF00691 OmpA family AMD06_RS12290 PF13677 AMD06_RS12290 AMD06_RS12295 PF13614 AAA domain AMD06_RS12300 PF01584 CheW-like domain AMD06_RS12305 PF13466 STAS domain AMD06_RS12310 PF00072 Response regulator receiver domain AMD06_RS12315 PF01584 CheW-like domain AMD06_RS12315 PF01627 Hpt domain AMD06_RS12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS12315 PF02895 Signal transducing histidine kinase, homodimeric domain AMD06_RS12320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12320 PF00672 HAMP domain AMD06_RS12320 PF12729 AMD06_RS12320 AMD06_RS12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12330 PF00672 HAMP domain AMD06_RS12330 PF17200 AMD06_RS12330 AMD06_RS12335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12335 PF00672 HAMP domain AMD06_RS12335 PF02743 Cache domain AMD06_RS12340 PF13557 AMD06_RS12340 AMD06_RS12345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12350 PF00672 HAMP domain AMD06_RS12350 PF12729 AMD06_RS12350 AMD06_RS12355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12355 PF00672 HAMP domain AMD06_RS12355 PF12729 AMD06_RS12355 AMD06_RS12360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12360 PF00672 HAMP domain AMD06_RS12360 PF05227 CHASE3 domain AMD06_RS12370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12370 PF00672 HAMP domain AMD06_RS12370 PF12729 AMD06_RS12370 AMD06_RS12375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12375 PF00672 HAMP domain AMD06_RS12380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12380 PF00672 HAMP domain AMD06_RS12380 PF12729 AMD06_RS12380 AMD06_RS12385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12385 PF00672 HAMP domain AMD06_RS12385 PF12729 AMD06_RS12385 AMD06_RS12390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12390 PF00672 HAMP domain AMD06_RS12390 PF17201 AMD06_RS12390 AMD06_RS12395 PF07238 PilZ domain AMD06_RS12395 PF07317 Flagellar regulator YcgR AMD06_RS12400 PF01584 CheW-like domain AMD06_RS12410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS12410 PF00672 HAMP domain AMD06_RS12410 PF12729 AMD06_RS12410 AMD06_RS12415 PF01739 CheR methyltransferase, SAM binding domain AMD06_RS12415 PF03705 CheR methyltransferase, all-alpha domain AMD06_RS12420 PF03975 CheD chemotactic sensory transduction AMD06_RS12425 PF00072 Response regulator receiver domain AMD06_RS12425 PF01339 CheB methylesterase AMD06_RS12430 PF00563 EAL domain AMD06_RS12430 PF00990 GGDEF domain AMD06_RS12430 PF13185 GAF domain AMD06_RS12430 PF13426 PAS domain AMD06_RS12435 PF00561 alpha/beta hydrolase fold AMD06_RS12440 PF00330 Aconitase family (aconitate hydratase) AMD06_RS12440 PF06434 Aconitate hydratase 2 N-terminus AMD06_RS12440 PF11791 Aconitate B N-terminal domain AMD06_RS12445 PF01850 PIN domain AMD06_RS12450 PF04014 Antidote-toxin recognition MazE AMD06_RS12455 PF00330 Aconitase family (aconitate hydratase) AMD06_RS12455 PF00694 Aconitase C-terminal domain AMD06_RS12465 PF00501 AMP-binding enzyme AMD06_RS12465 PF13193 AMP-binding enzyme C-terminal domain AMD06_RS12470 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS12475 PF00072 Response regulator receiver domain AMD06_RS12475 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS12475 PF01627 Hpt domain AMD06_RS12475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS12480 PF00072 Response regulator receiver domain AMD06_RS12480 PF01966 HD domain AMD06_RS12485 PF00152 tRNA synthetases class II (D, K and N) AMD06_RS12485 PF01336 OB-fold nucleic acid binding domain AMD06_RS12490 PF00472 RF-1 domain AMD06_RS12490 PF03462 PCRF domain AMD06_RS12495 PF04397 LytTr DNA-binding domain AMD06_RS12500 PF01757 AMD06_RS12500 AMD06_RS12510 PF13683 AMD06_RS12510 AMD06_RS12525 PF15649 AMD06_RS12525 AMD06_RS12535 PF05593 AMD06_RS12535 AMD06_RS12540 PF01368 DHH family AMD06_RS12540 PF02272 DHHA1 domain AMD06_RS12550 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD06_RS12550 PF03449 Transcription elongation factor, N-terminal AMD06_RS12555 PF02142 MGS-like domain AMD06_RS12555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD06_RS12555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD06_RS12565 PF00117 Glutamine amidotransferase class-I AMD06_RS12565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD06_RS12570 PF01113 Dihydrodipicolinate reductase, N-terminus AMD06_RS12570 PF05173 Dihydrodipicolinate reductase, C-terminus AMD06_RS12575 PF03473 MOSC domain AMD06_RS12575 PF03475 3-alpha domain AMD06_RS12580 PF00155 Aminotransferase class I and II AMD06_RS12595 PF02421 Ferrous iron transport protein B AMD06_RS12595 PF07664 AMD06_RS12595 AMD06_RS12595 PF07670 Nucleoside recognition AMD06_RS12600 PF04023 FeoA domain AMD06_RS12605 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS12610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS12615 PF00682 HMGL-like AMD06_RS12620 PF00106 short chain dehydrogenase AMD06_RS12625 PF01132 Elongation factor P (EF-P) OB domain AMD06_RS12625 PF08207 Elongation factor P (EF-P) KOW-like domain AMD06_RS12625 PF09285 Elongation factor P, C-terminal AMD06_RS12635 PF13387 AMD06_RS12635 AMD06_RS12640 PF09498 AMD06_RS12640 AMD06_RS12645 PF01565 FAD binding domain AMD06_RS12645 PF02913 FAD linked oxidases, C-terminal domain AMD06_RS12650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD06_RS12650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD06_RS12655 PF00293 NUDIX domain AMD06_RS12660 PF13520 Amino acid permease AMD06_RS12665 PF13520 Amino acid permease AMD06_RS12670 PF00596 Class II Aldolase and Adducin N-terminal domain AMD06_RS12675 PF03079 ARD/ARD' family AMD06_RS12685 PF01650 Peptidase C13 family AMD06_RS12690 PF00149 Calcineurin-like phosphoesterase AMD06_RS12690 PF16370 AMD06_RS12690 AMD06_RS12690 PF16371 AMD06_RS12690 AMD06_RS12695 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD06_RS12695 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD06_RS12700 PF00977 Histidine biosynthesis protein AMD06_RS12705 PF00977 Histidine biosynthesis protein AMD06_RS12710 PF00117 Glutamine amidotransferase class-I AMD06_RS12715 PF00475 Imidazoleglycerol-phosphate dehydratase AMD06_RS12715 PF13242 HAD-hyrolase-like AMD06_RS12720 PF00155 Aminotransferase class I and II AMD06_RS12725 PF00815 Histidinol dehydrogenase AMD06_RS12730 PF01634 ATP phosphoribosyltransferase AMD06_RS12730 PF08029 HisG, C-terminal domain AMD06_RS12735 PF01371 Trp repressor protein AMD06_RS12740 PF03129 Anticodon binding domain AMD06_RS12740 PF13393 Histidyl-tRNA synthetase AMD06_RS12745 PF00027 Cyclic nucleotide-binding domain AMD06_RS12745 PF13545 Crp-like helix-turn-helix domain AMD06_RS12750 PF13645 AMD06_RS12750 AMD06_RS12755 PF00291 Pyridoxal-phosphate dependent enzyme AMD06_RS12755 PF14821 Threonine synthase N terminus AMD06_RS12760 PF07110 EthD domain AMD06_RS12765 PF00288 GHMP kinases N terminal domain AMD06_RS12765 PF08544 GHMP kinases C terminal AMD06_RS12770 PF00696 Amino acid kinase family AMD06_RS12770 PF00742 Homoserine dehydrogenase AMD06_RS12770 PF03447 Homoserine dehydrogenase, NAD binding domain AMD06_RS12770 PF13840 ACT domain AMD06_RS12775 PF03073 TspO/MBR family AMD06_RS12780 PF05594 AMD06_RS12780 AMD06_RS12785 PF05594 AMD06_RS12785 AMD06_RS12785 PF13332 AMD06_RS12785 AMD06_RS12790 PF05594 AMD06_RS12790 AMD06_RS12790 PF05860 haemagglutination activity domain AMD06_RS12790 PF13332 AMD06_RS12790 AMD06_RS12795 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD06_RS12795 PF08479 POTRA domain, ShlB-type AMD06_RS12800 PF13432 Tetratricopeptide repeat AMD06_RS12800 PF14559 Tetratricopeptide repeat AMD06_RS12805 PF01522 Polysaccharide deacetylase AMD06_RS12805 PF14883 Hypothetical glycosyl hydrolase family 13 AMD06_RS12810 PF13641 Glycosyltransferase like family 2 AMD06_RS12815 PF13994 AMD06_RS12815 AMD06_RS12825 PF00171 Aldehyde dehydrogenase family AMD06_RS12830 PF13828 AMD06_RS12830 AMD06_RS12835 PF08241 Methyltransferase domain AMD06_RS12840 PF01180 Dihydroorotate dehydrogenase AMD06_RS12845 PF01565 FAD binding domain AMD06_RS12845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD06_RS12850 PF00892 EamA-like transporter family AMD06_RS12855 PF01177 Asp/Glu/Hydantoin racemase AMD06_RS12860 PF07690 Major Facilitator Superfamily AMD06_RS12865 PF01569 PAP2 superfamily AMD06_RS12870 PF04551 GcpE protein AMD06_RS12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS12880 PF00072 Response regulator receiver domain AMD06_RS12880 PF02954 Bacterial regulatory protein, Fis family AMD06_RS12885 PF00150 Cellulase (glycosyl hydrolase family 5) AMD06_RS12890 PF00563 EAL domain AMD06_RS12890 PF00990 GGDEF domain AMD06_RS12890 PF01590 GAF domain AMD06_RS12895 PF00474 Sodium:solute symporter family AMD06_RS12900 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD06_RS12900 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD06_RS12905 PF05787 Bacterial protein of unknown function (DUF839) AMD06_RS12915 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD06_RS12920 PF00342 Phosphoglucose isomerase AMD06_RS12925 PF02261 Aspartate decarboxylase AMD06_RS12930 PF02569 Pantoate-beta-alanine ligase AMD06_RS12935 PF02548 Ketopantoate hydroxymethyltransferase AMD06_RS12940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD06_RS12945 PF01743 Poly A polymerase head domain AMD06_RS12945 PF12626 Polymerase A arginine-rich C-terminus AMD06_RS12945 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD06_RS12955 PF02649 Type I GTP cyclohydrolase folE2 AMD06_RS12960 PF01520 N-acetylmuramoyl-L-alanine amidase AMD06_RS12960 PF11741 AMIN domain AMD06_RS12965 PF00128 Alpha amylase, catalytic domain AMD06_RS12970 PF01527 Transposase AMD06_RS12975 PF13683 AMD06_RS12975 AMD06_RS12990 PF01471 Putative peptidoglycan binding domain AMD06_RS13000 PF04610 AMD06_RS13000 AMD06_RS13010 PF03135 AMD06_RS13010 AMD06_RS13015 PF05101 AMD06_RS13015 AMD06_RS13020 PF04956 AMD06_RS13020 AMD06_RS13025 PF01464 Transglycosylase SLT domain AMD06_RS13030 PF00437 Type II/IV secretion system protein AMD06_RS13035 PF03743 Bacterial conjugation TrbI-like protein AMD06_RS13040 PF03524 Conjugal transfer protein AMD06_RS13045 PF04335 VirB8 protein AMD06_RS13050 PF10671 Toxin co-regulated pilus biosynthesis protein Q AMD06_RS13055 PF02534 Type IV secretory system Conjugative DNA transfer AMD06_RS13070 PF00271 Helicase conserved C-terminal domain AMD06_RS13070 PF02151 UvrB/uvrC motif AMD06_RS13070 PF04851 Type III restriction enzyme, res subunit AMD06_RS13070 PF12344 Ultra-violet resistance protein B AMD06_RS13105 PF01527 Transposase AMD06_RS13115 PF13333 AMD06_RS13115 AMD06_RS13120 PF13936 Helix-turn-helix domain AMD06_RS13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS13145 PF03466 LysR substrate binding domain AMD06_RS13150 PF02525 Flavodoxin-like fold AMD06_RS13155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD06_RS13155 PF02403 Seryl-tRNA synthetase N-terminal domain AMD06_RS13160 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS13165 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS13170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD06_RS13175 PF00800 Prephenate dehydratase AMD06_RS13175 PF01817 Chorismate mutase type II AMD06_RS13175 PF01842 ACT domain AMD06_RS13180 PF00266 Aminotransferase class-V AMD06_RS13185 PF00174 Oxidoreductase molybdopterin binding domain AMD06_RS13190 PF01794 AMD06_RS13190 AMD06_RS13195 PF16697 AMD06_RS13195 AMD06_RS13200 PF09650 AMD06_RS13200 AMD06_RS13205 PF05597 AMD06_RS13205 AMD06_RS13215 PF04471 Restriction endonuclease AMD06_RS13220 PF00392 Bacterial regulatory proteins, gntR family AMD06_RS13220 PF07702 UTRA domain AMD06_RS13230 PF01979 Amidohydrolase family AMD06_RS13235 PF07969 Amidohydrolase family AMD06_RS13240 PF00221 Aromatic amino acid lyase AMD06_RS13245 PF05013 N-formylglutamate amidohydrolase AMD06_RS13250 PF01175 Urocanase AMD06_RS13260 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD06_RS13260 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD06_RS13265 PF01008 Initiation factor 2 subunit family AMD06_RS13270 PF11218 AMD06_RS13270 AMD06_RS13275 PF00152 tRNA synthetases class II (D, K and N) AMD06_RS13280 PF00533 BRCA1 C Terminus (BRCT) domain AMD06_RS13280 PF01653 NAD-dependent DNA ligase adenylation domain AMD06_RS13280 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD06_RS13280 PF03120 NAD-dependent DNA ligase OB-fold domain AMD06_RS13280 PF12826 Helix-hairpin-helix motif AMD06_RS13285 PF00155 Aminotransferase class I and II AMD06_RS13295 PF04354 ZipA, C-terminal FtsZ-binding domain AMD06_RS13300 PF02463 RecF/RecN/SMC N terminal domain AMD06_RS13305 PF01281 Ribosomal protein L9, N-terminal domain AMD06_RS13305 PF03948 Ribosomal protein L9, C-terminal domain AMD06_RS13310 PF01084 Ribosomal protein S18 AMD06_RS13315 PF01250 Ribosomal protein S6 AMD06_RS13320 PF01521 Iron-sulphur cluster biosynthesis AMD06_RS13325 PF00152 tRNA synthetases class II (D, K and N) AMD06_RS13325 PF01336 OB-fold nucleic acid binding domain AMD06_RS13345 PF04299 Putative FMN-binding domain AMD06_RS13355 PF00161 Ribosome inactivating protein AMD06_RS13360 PF00072 Response regulator receiver domain AMD06_RS13360 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS13390 PF11655 AMD06_RS13390 AMD06_RS13395 PF11655 AMD06_RS13395 AMD06_RS13400 PF05838 Glycosyl hydrolase 108 AMD06_RS13400 PF09374 Predicted Peptidoglycan domain AMD06_RS13405 PF00484 Carbonic anhydrase AMD06_RS13410 PF06052 3-hydroxyanthranilic acid dioxygenase AMD06_RS13415 PF12805 AMD06_RS13415 AMD06_RS13415 PF13515 AMD06_RS13415 AMD06_RS13420 PF00266 Aminotransferase class-V AMD06_RS13425 PF01494 FAD binding domain AMD06_RS13430 PF00929 Exonuclease AMD06_RS13430 PF08411 Exonuclease C-terminal AMD06_RS13435 PF09365 AMD06_RS13435 AMD06_RS13445 PF11159 AMD06_RS13445 AMD06_RS13450 PF06189 AMD06_RS13450 AMD06_RS13455 PF01513 ATP-NAD kinase AMD06_RS13460 PF01170 Putative RNA methylase family UPF0020 AMD06_RS13460 PF02926 THUMP domain AMD06_RS13460 PF10672 S-adenosylmethionine-dependent methyltransferase AMD06_RS13465 PF00005 ABC transporter AMD06_RS13470 PF00583 Acetyltransferase (GNAT) family AMD06_RS13475 PF05728 Uncharacterised protein family (UPF0227) AMD06_RS13480 PF03473 MOSC domain AMD06_RS13485 PF01510 N-acetylmuramoyl-L-alanine amidase AMD06_RS13490 PF07920 Protein of unknown function (DUF1684) AMD06_RS13495 PF00581 Rhodanese-like domain AMD06_RS13500 PF00293 NUDIX domain AMD06_RS13500 PF06945 AMD06_RS13500 AMD06_RS13505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD06_RS13505 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD06_RS13510 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS13520 PF00633 Helix-hairpin-helix motif AMD06_RS13520 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD06_RS13525 PF00916 AMD06_RS13525 AMD06_RS13530 PF00484 Carbonic anhydrase AMD06_RS13540 PF07396 Phosphate-selective porin O and P AMD06_RS13545 PF12849 PBP superfamily domain AMD06_RS13550 PF12849 PBP superfamily domain AMD06_RS13555 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS13560 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS13565 PF00005 ABC transporter AMD06_RS13570 PF01895 PhoU domain AMD06_RS13575 PF11776 Domain of unknown function (DUF3315) AMD06_RS13580 PF00929 Exonuclease AMD06_RS13585 PF00990 GGDEF domain AMD06_RS13585 PF07494 Two component regulator propeller AMD06_RS13585 PF07495 Y_Y_Y domain AMD06_RS13590 PF00588 SpoU rRNA Methylase family AMD06_RS13590 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD06_RS13595 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD06_RS13600 PF00575 S1 RNA binding domain AMD06_RS13600 PF00773 RNB domain AMD06_RS13600 PF08206 Ribonuclease B OB domain AMD06_RS13610 PF13472 GDSL-like Lipase/Acylhydrolase family AMD06_RS13615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS13615 PF02770 Acyl-CoA dehydrogenase, middle domain AMD06_RS13615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD06_RS13620 PF01022 Bacterial regulatory protein, arsR family AMD06_RS13620 PF08241 Methyltransferase domain AMD06_RS13625 PF02574 Homocysteine S-methyltransferase AMD06_RS13630 PF00809 Pterin binding enzyme AMD06_RS13630 PF02310 B12 binding domain AMD06_RS13630 PF02607 B12 binding domain AMD06_RS13630 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD06_RS13635 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) AMD06_RS13640 PF00294 pfkB family carbohydrate kinase AMD06_RS13645 PF07690 Major Facilitator Superfamily AMD06_RS13650 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS13650 PF13377 Periplasmic binding protein-like domain AMD06_RS13655 PF13557 AMD06_RS13655 AMD06_RS13660 PF09831 AMD06_RS13660 AMD06_RS13665 PF04102 SlyX AMD06_RS13670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD06_RS13670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD06_RS13670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD06_RS13675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD06_RS13675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD06_RS13680 PF00255 Glutathione peroxidase AMD06_RS13685 PF00392 Bacterial regulatory proteins, gntR family AMD06_RS13690 PF00005 ABC transporter AMD06_RS13705 PF11101 AMD06_RS13705 AMD06_RS13715 PF00206 Lyase AMD06_RS13715 PF10415 Fumarase C C-terminus AMD06_RS13720 PF00571 CBS domain AMD06_RS13720 PF01595 AMD06_RS13720 AMD06_RS13720 PF03471 Transporter associated domain AMD06_RS13725 PF00188 Cysteine-rich secretory protein family AMD06_RS13730 PF00206 Lyase AMD06_RS13730 PF08328 Adenylosuccinate lyase C-terminal AMD06_RS13735 PF11259 AMD06_RS13735 AMD06_RS13740 PF08007 Cupin superfamily protein AMD06_RS13745 PF13673 Acetyltransferase (GNAT) domain AMD06_RS13750 PF00676 Dehydrogenase E1 component AMD06_RS13750 PF02779 Transketolase, pyrimidine binding domain AMD06_RS13750 PF16078 AMD06_RS13750 AMD06_RS13750 PF16870 AMD06_RS13750 AMD06_RS13755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD06_RS13755 PF00364 Biotin-requiring enzyme AMD06_RS13755 PF02817 e3 binding domain AMD06_RS13760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD06_RS13760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS13765 PF03641 Possible lysine decarboxylase AMD06_RS13770 PF01205 Uncharacterized protein family UPF0029 AMD06_RS13770 PF09186 Domain of unknown function (DUF1949) AMD06_RS13775 PF00005 ABC transporter AMD06_RS13775 PF00664 ABC transporter transmembrane region AMD06_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS13780 PF03466 LysR substrate binding domain AMD06_RS13790 PF16576 AMD06_RS13790 AMD06_RS13795 PF02321 Outer membrane efflux protein AMD06_RS13805 PF01842 ACT domain AMD06_RS13805 PF02153 Prephenate dehydrogenase AMD06_RS13810 PF08543 Phosphomethylpyrimidine kinase AMD06_RS13815 PF00226 DnaJ domain AMD06_RS13815 PF00684 DnaJ central domain AMD06_RS13815 PF01556 DnaJ C terminal domain AMD06_RS13820 PF00012 Hsp70 protein AMD06_RS13825 PF01025 GrpE AMD06_RS13830 PF01628 HrcA protein C terminal domain AMD06_RS13830 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD06_RS13835 PF02463 RecF/RecN/SMC N terminal domain AMD06_RS13840 PF01475 Ferric uptake regulator family AMD06_RS13845 PF04355 SmpA / OmlA family AMD06_RS13850 PF03658 RnfH family Ubiquitin AMD06_RS13855 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD06_RS13860 PF01668 SmpB protein AMD06_RS13865 PF00082 Subtilase family AMD06_RS13885 PF13910 AMD06_RS13885 AMD06_RS13890 PF03389 MobA/MobL family AMD06_RS13895 PF00665 Integrase core domain AMD06_RS13900 PF01527 Transposase AMD06_RS13910 PF01381 Helix-turn-helix AMD06_RS13925 PF05598 AMD06_RS13925 AMD06_RS13930 PF00589 Phage integrase family AMD06_RS13940 PF00816 H-NS histone family AMD06_RS13950 PF06114 Domain of unknown function (DUF955) AMD06_RS13955 PF01381 Helix-turn-helix AMD06_RS13970 PF00990 GGDEF domain AMD06_RS13970 PF05227 CHASE3 domain AMD06_RS13970 PF13185 GAF domain AMD06_RS13980 PF00990 GGDEF domain AMD06_RS13985 PF02321 Outer membrane efflux protein AMD06_RS13990 PF00106 short chain dehydrogenase AMD06_RS13995 PF00873 AcrB/AcrD/AcrF family AMD06_RS14000 PF16576 AMD06_RS14000 AMD06_RS14005 PF00106 short chain dehydrogenase AMD06_RS14015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS14015 PF03466 LysR substrate binding domain AMD06_RS14020 PF00691 OmpA family AMD06_RS14020 PF13488 AMD06_RS14020 AMD06_RS14025 PF00875 DNA photolyase AMD06_RS14025 PF03441 FAD binding domain of DNA photolyase AMD06_RS14030 PF00772 DnaB-like helicase N terminal domain AMD06_RS14030 PF03796 DnaB-like helicase C terminal domain AMD06_RS14035 PF03358 NADPH-dependent FMN reductase AMD06_RS14040 PF00733 Asparagine synthase AMD06_RS14040 PF13537 Glutamine amidotransferase domain AMD06_RS14050 PF00043 Glutathione S-transferase, C-terminal domain AMD06_RS14050 PF02798 Glutathione S-transferase, N-terminal domain AMD06_RS14055 PF01841 Transglutaminase-like superfamily AMD06_RS14055 PF12969 Domain of Unknown Function with PDB structure (DUF3857) AMD06_RS14060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS14060 PF02770 Acyl-CoA dehydrogenase, middle domain AMD06_RS14060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD06_RS14065 PF05433 AMD06_RS14065 AMD06_RS14075 PF01026 TatD related DNase AMD06_RS14080 PF00899 ThiF family AMD06_RS14085 PF01322 Cytochrome C' AMD06_RS14090 PF05433 AMD06_RS14090 AMD06_RS14095 PF00313 'Cold-shock' DNA-binding domain AMD06_RS14100 PF04306 AMD06_RS14100 AMD06_RS14105 PF02253 Phospholipase A1 AMD06_RS14110 PF00484 Carbonic anhydrase AMD06_RS14115 PF02798 Glutathione S-transferase, N-terminal domain AMD06_RS14115 PF14497 Glutathione S-transferase, C-terminal domain AMD06_RS14120 PF05681 AMD06_RS14120 AMD06_RS14120 PF05683 Fumarase C-terminus AMD06_RS14125 PF00005 ABC transporter AMD06_RS14130 PF00175 Oxidoreductase NAD-binding domain AMD06_RS14130 PF00970 Oxidoreductase FAD-binding domain AMD06_RS14135 PF00255 Glutathione peroxidase AMD06_RS14140 PF01432 Peptidase family M3 AMD06_RS14145 PF01047 MarR family AMD06_RS14150 PF13739 Domain of unknown function (DUF4163) AMD06_RS14155 PF14542 GCN5-related N-acetyl-transferase AMD06_RS14165 PF01694 Rhomboid family AMD06_RS14170 PF00854 POT family AMD06_RS14175 PF00246 Zinc carboxypeptidase AMD06_RS14180 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD06_RS14180 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD06_RS14180 PF14310 Fibronectin type III-like domain AMD06_RS14190 PF07690 Major Facilitator Superfamily AMD06_RS14195 PF00529 HlyD family secretion protein AMD06_RS14195 PF16576 AMD06_RS14195 AMD06_RS14200 PF02321 Outer membrane efflux protein AMD06_RS14205 PF01047 MarR family AMD06_RS14210 PF02311 AraC-like ligand binding domain AMD06_RS14210 PF12833 Helix-turn-helix domain AMD06_RS14215 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD06_RS14215 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD06_RS14225 PF05724 Thiopurine S-methyltransferase (TPMT) AMD06_RS14230 PF00210 Ferritin-like domain AMD06_RS14235 PF01804 Penicillin amidase AMD06_RS14240 PF00593 TonB dependent receptor AMD06_RS14240 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS14245 PF13229 Right handed beta helix region AMD06_RS14250 PF00733 Asparagine synthase AMD06_RS14250 PF13537 Glutamine amidotransferase domain AMD06_RS14255 PF01546 Peptidase family M20/M25/M40 AMD06_RS14255 PF07687 Peptidase dimerisation domain AMD06_RS14260 PF03960 ArsC family AMD06_RS14265 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS14265 PF14602 Hexapeptide repeat of succinyl-transferase AMD06_RS14265 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD06_RS14270 PF01909 Nucleotidyltransferase domain AMD06_RS14270 PF01966 HD domain AMD06_RS14270 PF08335 GlnD PII-uridylyltransferase AMD06_RS14275 PF00557 Metallopeptidase family M24 AMD06_RS14280 PF05229 AMD06_RS14280 AMD06_RS14285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD06_RS14290 PF00577 Outer membrane usher protein AMD06_RS14290 PF13953 PapC C-terminal domain AMD06_RS14295 PF05229 AMD06_RS14295 AMD06_RS14305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD06_RS14310 PF00318 Ribosomal protein S2 AMD06_RS14315 PF00889 Elongation factor TS AMD06_RS14320 PF00990 GGDEF domain AMD06_RS14320 PF08668 HDOD domain AMD06_RS14325 PF00696 Amino acid kinase family AMD06_RS14330 PF01765 Ribosome recycling factor AMD06_RS14335 PF01255 Putative undecaprenyl diphosphate synthase AMD06_RS14340 PF01148 Cytidylyltransferase family AMD06_RS14345 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD06_RS14345 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AMD06_RS14345 PF13288 DXP reductoisomerase C-terminal domain AMD06_RS14350 PF02163 Peptidase family M50 AMD06_RS14355 PF01103 Surface antigen AMD06_RS14355 PF07244 Surface antigen variable number repeat AMD06_RS14365 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS14365 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD06_RS14370 PF07977 FabA-like domain AMD06_RS14375 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS14375 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD06_RS14380 PF02684 AMD06_RS14380 AMD06_RS14385 PF01351 Ribonuclease HII AMD06_RS14390 PF01336 OB-fold nucleic acid binding domain AMD06_RS14390 PF02811 PHP domain AMD06_RS14390 PF07733 Bacterial DNA polymerase III alpha subunit AMD06_RS14390 PF14579 Helix-hairpin-helix motif AMD06_RS14395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD06_RS14400 PF14559 Tetratricopeptide repeat AMD06_RS14410 PF03653 AMD06_RS14410 AMD06_RS14415 PF13489 Methyltransferase domain AMD06_RS14420 PF06850 AMD06_RS14420 AMD06_RS14425 PF13796 AMD06_RS14425 AMD06_RS14430 PF03551 Transcriptional regulator PadR-like family AMD06_RS14435 PF13372 Alginate export AMD06_RS14445 PF04367 AMD06_RS14445 AMD06_RS14450 PF02592 AMD06_RS14450 AMD06_RS14455 PF05960 Bacterial protein of unknown function (DUF885) AMD06_RS14460 PF02574 Homocysteine S-methyltransferase AMD06_RS14465 PF00324 Amino acid permease AMD06_RS14470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS14475 PF00005 ABC transporter AMD06_RS14480 PF01433 Peptidase family M1 AMD06_RS14480 PF12679 AMD06_RS14480 AMD06_RS14485 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD06_RS14490 PF01588 Putative tRNA binding domain AMD06_RS14490 PF09334 tRNA synthetases class I (M) AMD06_RS14495 PF12710 haloacid dehalogenase-like hydrolase AMD06_RS14500 PF04060 Putative Fe-S cluster AMD06_RS14500 PF14697 4Fe-4S dicluster domain AMD06_RS14520 PF04542 Sigma-70 region 2 AMD06_RS14520 PF08281 Sigma-70, region 4 AMD06_RS14525 PF10099 AMD06_RS14525 AMD06_RS14530 PF00487 AMD06_RS14530 AMD06_RS14535 PF01593 Flavin containing amine oxidoreductase AMD06_RS14540 PF07103 AMD06_RS14540 AMD06_RS14545 PF02353 Mycolic acid cyclopropane synthetase AMD06_RS14550 PF11086 AMD06_RS14550 AMD06_RS14555 PF06966 AMD06_RS14555 AMD06_RS14560 PF02353 Mycolic acid cyclopropane synthetase AMD06_RS14565 PF01042 Endoribonuclease L-PSP AMD06_RS14570 PF06197 AMD06_RS14570 AMD06_RS14575 PF03706 AMD06_RS14575 AMD06_RS14575 PF09924 Uncharacterized conserved protein (DUF2156) AMD06_RS14580 PF06057 Bacterial virulence protein (VirJ) AMD06_RS14585 PF09791 AMD06_RS14585 AMD06_RS14595 PF13563 2'-5' RNA ligase superfamily AMD06_RS14600 PF09537 Domain of unknown function (DUF2383) AMD06_RS14610 PF07690 Major Facilitator Superfamily AMD06_RS14615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD06_RS14620 PF03831 PhnA protein AMD06_RS14620 PF08274 PhnA Zinc-Ribbon AMD06_RS14625 PF01545 Cation efflux family AMD06_RS14630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD06_RS14635 PF06723 MreB/Mbl protein AMD06_RS14650 PF00924 Mechanosensitive ion channel AMD06_RS14655 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD06_RS14660 PF10982 Protein of unknown function (DUF2789) AMD06_RS14665 PF07043 AMD06_RS14665 AMD06_RS14670 PF01863 Protein of unknown function DUF45 AMD06_RS14675 PF13640 2OG-Fe(II) oxygenase superfamily AMD06_RS14680 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD06_RS14680 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD06_RS14685 PF00082 Subtilase family AMD06_RS14685 PF03797 Autotransporter beta-domain AMD06_RS14685 PF12951 AMD06_RS14685 AMD06_RS14690 PF00108 Thiolase, N-terminal domain AMD06_RS14690 PF02803 Thiolase, C-terminal domain AMD06_RS14705 PF00990 GGDEF domain AMD06_RS14705 PF05227 CHASE3 domain AMD06_RS14705 PF13185 GAF domain AMD06_RS14710 PF04519 AMD06_RS14710 AMD06_RS14730 PF01068 ATP dependent DNA ligase domain AMD06_RS14730 PF04675 DNA ligase N terminus AMD06_RS14730 PF04679 ATP dependent DNA ligase C terminal region AMD06_RS14735 PF00270 DEAD/DEAH box helicase AMD06_RS14735 PF00271 Helicase conserved C-terminal domain AMD06_RS14735 PF08494 AMD06_RS14735 AMD06_RS14740 PF00149 Calcineurin-like phosphoesterase AMD06_RS14745 PF01494 FAD binding domain AMD06_RS14750 PF00313 'Cold-shock' DNA-binding domain AMD06_RS14755 PF01048 Phosphorylase superfamily AMD06_RS14760 PF00156 Phosphoribosyl transferase domain AMD06_RS14765 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD06_RS14770 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD06_RS14775 PF13450 NAD(P)-binding Rossmann-like domain AMD06_RS14780 PF01323 DSBA-like thioredoxin domain AMD06_RS14785 PF01928 CYTH domain AMD06_RS14790 PF05958 tRNA (Uracil-5-)-methyltransferase AMD06_RS14795 PF00072 Response regulator receiver domain AMD06_RS14795 PF01627 Hpt domain AMD06_RS14800 PF02565 Recombination protein O C terminal AMD06_RS14800 PF11967 Recombination protein O N terminal AMD06_RS14805 PF01926 50S ribosome-binding GTPase AMD06_RS14805 PF07650 KH domain AMD06_RS14810 PF00035 Double-stranded RNA binding motif AMD06_RS14810 PF14622 Ribonuclease-III-like AMD06_RS14815 PF16137 AMD06_RS14815 AMD06_RS14820 PF00717 Peptidase S24-like AMD06_RS14825 PF00009 Elongation factor Tu GTP binding domain AMD06_RS14825 PF00679 Elongation factor G C-terminus AMD06_RS14825 PF03144 Elongation factor Tu domain 2 AMD06_RS14825 PF06421 GTP-binding protein LepA C-terminus AMD06_RS14830 PF13180 PDZ domain AMD06_RS14830 PF13365 Trypsin-like peptidase domain AMD06_RS14835 PF03872 Anti sigma-E protein RseA, N-terminal domain AMD06_RS14840 PF04542 Sigma-70 region 2 AMD06_RS14840 PF08281 Sigma-70, region 4 AMD06_RS14845 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS14845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD06_RS14845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD06_RS14850 PF01545 Cation efflux family AMD06_RS14855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD06_RS14855 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD06_RS14860 PF16113 AMD06_RS14860 AMD06_RS14865 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS14870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS14870 PF02770 Acyl-CoA dehydrogenase, middle domain AMD06_RS14870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD06_RS14875 PF00171 Aldehyde dehydrogenase family AMD06_RS14880 PF06114 Domain of unknown function (DUF955) AMD06_RS14880 PF09856 AMD06_RS14880 AMD06_RS14880 PF13560 Helix-turn-helix domain AMD06_RS14885 PF00593 TonB dependent receptor AMD06_RS14885 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS14890 PF07745 Glycosyl hydrolase family 53 AMD06_RS14895 PF00703 Glycosyl hydrolases family 2 AMD06_RS14895 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD06_RS14895 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD06_RS14895 PF16355 AMD06_RS14895 AMD06_RS14905 PF00754 F5/8 type C domain AMD06_RS14905 PF01120 Alpha-L-fucosidase AMD06_RS14910 PF14085 AMD06_RS14910 AMD06_RS14915 PF16158 AMD06_RS14915 AMD06_RS14920 PF05593 AMD06_RS14920 AMD06_RS14925 PF00488 MutS domain V AMD06_RS14925 PF01624 MutS domain I AMD06_RS14925 PF05188 MutS domain II AMD06_RS14925 PF05190 MutS family domain IV AMD06_RS14925 PF05192 MutS domain III AMD06_RS14930 PF06078 Bacterial protein of unknown function (DUF937) AMD06_RS14935 PF00141 Peroxidase AMD06_RS14940 PF01479 S4 domain AMD06_RS14945 PF00043 Glutathione S-transferase, C-terminal domain AMD06_RS14945 PF13417 Glutathione S-transferase, N-terminal domain AMD06_RS14950 PF08279 HTH domain AMD06_RS14950 PF13280 AMD06_RS14950 AMD06_RS14960 PF01554 MatE AMD06_RS14965 PF01245 Ribosomal protein L19 AMD06_RS14970 PF01746 tRNA (Guanine-1)-methyltransferase AMD06_RS14975 PF01782 RimM N-terminal domain AMD06_RS14975 PF05239 PRC-barrel domain AMD06_RS14980 PF00886 Ribosomal protein S16 AMD06_RS14985 PF01063 Aminotransferase class IV AMD06_RS14990 PF03060 Nitronate monooxygenase AMD06_RS14995 PF00448 SRP54-type protein, GTPase domain AMD06_RS14995 PF02881 SRP54-type protein, helical bundle domain AMD06_RS14995 PF02978 Signal peptide binding domain AMD06_RS15000 PF01578 AMD06_RS15000 AMD06_RS15005 PF01263 Aldose 1-epimerase AMD06_RS15015 PF06964 Alpha-L-arabinofuranosidase C-terminus AMD06_RS15020 PF00722 Glycosyl hydrolases family 16 AMD06_RS15025 PF00072 Response regulator receiver domain AMD06_RS15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15030 PF13426 PAS domain AMD06_RS15035 PF00072 Response regulator receiver domain AMD06_RS15035 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS15035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15035 PF13185 GAF domain AMD06_RS15040 PF01739 CheR methyltransferase, SAM binding domain AMD06_RS15040 PF03705 CheR methyltransferase, all-alpha domain AMD06_RS15045 PF01339 CheB methylesterase AMD06_RS15050 PF00072 Response regulator receiver domain AMD06_RS15050 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15055 PF07237 Protein of unknown function (DUF1428) AMD06_RS15060 PF00085 Thioredoxin AMD06_RS15065 PF00593 TonB dependent receptor AMD06_RS15065 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS15070 PF04616 Glycosyl hydrolases family 43 AMD06_RS15075 PF00072 Response regulator receiver domain AMD06_RS15075 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS15075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15075 PF08448 PAS fold AMD06_RS15080 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15085 PF07228 Stage II sporulation protein E (SpoIIE) AMD06_RS15085 PF13581 Histidine kinase-like ATPase domain AMD06_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15100 PF01740 STAS domain AMD06_RS15100 PF14361 AMD06_RS15100 AMD06_RS15110 PF00183 Hsp90 protein AMD06_RS15110 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15115 PF12833 Helix-turn-helix domain AMD06_RS15120 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS15125 PF05656 AMD06_RS15125 AMD06_RS15130 PF13481 AAA domain AMD06_RS15130 PF13541 Subunit ChlI of Mg-chelatase AMD06_RS15135 PF05299 M61 glycyl aminopeptidase AMD06_RS15135 PF07720 Tetratricopeptide repeat AMD06_RS15140 PF03626 AMD06_RS15140 AMD06_RS15145 PF00510 Cytochrome c oxidase subunit III AMD06_RS15150 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD06_RS15155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD06_RS15155 PF06481 COX Aromatic Rich Motif AMD06_RS15165 PF02401 LytB protein AMD06_RS15170 PF01252 AMD06_RS15170 AMD06_RS15175 PF00133 tRNA synthetases class I (I, L, M and V) AMD06_RS15175 PF06827 Zinc finger found in FPG and IleRS AMD06_RS15175 PF08264 Anticodon-binding domain of tRNA AMD06_RS15180 PF01687 Riboflavin kinase AMD06_RS15180 PF06574 FAD synthetase AMD06_RS15185 PF03023 AMD06_RS15185 AMD06_RS15190 PF01649 Ribosomal protein S20 AMD06_RS15195 PF01018 GTP1/OBG AMD06_RS15195 PF01926 50S ribosome-binding GTPase AMD06_RS15200 PF01016 Ribosomal L27 protein AMD06_RS15205 PF00829 Ribosomal prokaryotic L21 protein AMD06_RS15210 PF00005 ABC transporter AMD06_RS15215 PF13279 Thioesterase-like superfamily AMD06_RS15220 PF04314 Protein of unknown function (DUF461) AMD06_RS15225 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS15230 PF13622 Thioesterase-like superfamily AMD06_RS15235 PF09413 Domain of unknown function (DUF2007) AMD06_RS15245 PF13202 EF hand AMD06_RS15245 PF13499 EF-hand domain pair AMD06_RS15250 PF04376 AMD06_RS15250 AMD06_RS15250 PF04377 AMD06_RS15250 AMD06_RS15255 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS15260 PF02222 ATP-grasp domain AMD06_RS15265 PF01145 SPFH domain / Band 7 family AMD06_RS15280 PF02557 D-alanyl-D-alanine carboxypeptidase AMD06_RS15285 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD06_RS15290 PF04241 AMD06_RS15290 AMD06_RS15295 PF10604 Polyketide cyclase / dehydrase and lipid transport AMD06_RS15300 PF00072 Response regulator receiver domain AMD06_RS15300 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS15305 PF07730 Histidine kinase AMD06_RS15315 PF00583 Acetyltransferase (GNAT) family AMD06_RS15320 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD06_RS15320 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD06_RS15325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD06_RS15330 PF03776 Septum formation topological specificity factor MinE AMD06_RS15340 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS15340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15345 PF00072 Response regulator receiver domain AMD06_RS15345 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS15350 PF13231 AMD06_RS15350 AMD06_RS15355 PF01569 PAP2 superfamily AMD06_RS15360 PF00884 Sulfatase AMD06_RS15360 PF08019 AMD06_RS15360 AMD06_RS15365 PF01401 Angiotensin-converting enzyme AMD06_RS15375 PF07690 Major Facilitator Superfamily AMD06_RS15380 PF02347 Glycine cleavage system P-protein AMD06_RS15385 PF00135 Carboxylesterase family AMD06_RS15390 PF00248 Aldo/keto reductase family AMD06_RS15395 PF00199 Catalase AMD06_RS15395 PF06628 Catalase-related immune-responsive AMD06_RS15405 PF14412 AMD06_RS15405 AMD06_RS15410 PF07791 AMD06_RS15410 AMD06_RS15415 PF08845 AMD06_RS15415 AMD06_RS15420 PF13466 STAS domain AMD06_RS15425 PF01584 CheW-like domain AMD06_RS15425 PF01627 Hpt domain AMD06_RS15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS15425 PF02895 Signal transducing histidine kinase, homodimeric domain AMD06_RS15430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS15435 PF01584 CheW-like domain AMD06_RS15440 PF00072 Response regulator receiver domain AMD06_RS15440 PF00563 EAL domain AMD06_RS15445 PF01739 CheR methyltransferase, SAM binding domain AMD06_RS15445 PF03705 CheR methyltransferase, all-alpha domain AMD06_RS15450 PF00072 Response regulator receiver domain AMD06_RS15450 PF01339 CheB methylesterase AMD06_RS15455 PF13091 PLD-like domain AMD06_RS15460 PF01431 Peptidase family M13 AMD06_RS15460 PF05649 Peptidase family M13 AMD06_RS15470 PF00300 Histidine phosphatase superfamily (branch 1) AMD06_RS15475 PF04493 Endonuclease V AMD06_RS15485 PF02678 Pirin AMD06_RS15485 PF05726 Pirin C-terminal cupin domain AMD06_RS15495 PF02566 OsmC-like protein AMD06_RS15500 PF02678 Pirin AMD06_RS15500 PF05726 Pirin C-terminal cupin domain AMD06_RS15505 PF02554 AMD06_RS15505 AMD06_RS15505 PF13722 AMD06_RS15505 AMD06_RS15510 PF04328 AMD06_RS15510 AMD06_RS15515 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS15520 PF12796 Ankyrin repeats (3 copies) AMD06_RS15525 PF11187 Protein of unknown function (DUF2974) AMD06_RS15530 PF05684 AMD06_RS15530 AMD06_RS15545 PF12804 MobA-like NTP transferase domain AMD06_RS15555 PF02625 XdhC and CoxI family AMD06_RS15555 PF13478 XdhC Rossmann domain AMD06_RS15560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD06_RS15560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD06_RS15565 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD06_RS15565 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD06_RS15570 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD06_RS15570 PF01799 [2Fe-2S] binding domain AMD06_RS15575 PF00107 Zinc-binding dehydrogenase AMD06_RS15575 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS15580 PF00990 GGDEF domain AMD06_RS15580 PF02743 Cache domain AMD06_RS15585 PF00436 Single-strand binding protein family AMD06_RS15590 PF00348 Polyprenyl synthetase AMD06_RS15595 PF01738 Dienelactone hydrolase family AMD06_RS15600 PF02875 Mur ligase family, glutamate ligase domain AMD06_RS15600 PF08245 Mur ligase middle domain AMD06_RS15615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD06_RS15615 PF00696 Amino acid kinase family AMD06_RS15615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD06_RS15620 PF02567 Phenazine biosynthesis-like protein AMD06_RS15625 PF02567 Phenazine biosynthesis-like protein AMD06_RS15630 PF05433 AMD06_RS15630 AMD06_RS15635 PF02566 OsmC-like protein AMD06_RS15640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD06_RS15640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD06_RS15645 PF03652 Uncharacterised protein family (UPF0081) AMD06_RS15650 PF02622 Uncharacterized ACR, COG1678 AMD06_RS15660 PF03352 Methyladenine glycosylase AMD06_RS15665 PF01904 Protein of unknown function DUF72 AMD06_RS15670 PF03211 Pectate lyase AMD06_RS15675 PF00437 Type II/IV secretion system protein AMD06_RS15680 PF00437 Type II/IV secretion system protein AMD06_RS15685 PF01168 Alanine racemase, N-terminal domain AMD06_RS15690 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD06_RS15690 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD06_RS15695 PF00216 Bacterial DNA-binding protein AMD06_RS15700 PF01551 Peptidase family M23 AMD06_RS15705 PF12977 Domain of Unknown Function with PDB structure (DUF3861) AMD06_RS15715 PF07273 Protein of unknown function (DUF1439) AMD06_RS15720 PF01965 DJ-1/PfpI family AMD06_RS15725 PF00856 SET domain AMD06_RS15730 PF02082 Transcriptional regulator AMD06_RS15735 PF01458 Uncharacterized protein family (UPF0051) AMD06_RS15740 PF00005 ABC transporter AMD06_RS15745 PF01458 Uncharacterized protein family (UPF0051) AMD06_RS15750 PF00266 Aminotransferase class-V AMD06_RS15755 PF13673 Acetyltransferase (GNAT) domain AMD06_RS15760 PF00355 Rieske [2Fe-2S] domain AMD06_RS15765 PF00593 TonB dependent receptor AMD06_RS15765 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS15770 PF13640 2OG-Fe(II) oxygenase superfamily AMD06_RS15775 PF08238 Sel1 repeat AMD06_RS15780 PF16357 AMD06_RS15780 AMD06_RS15785 PF10029 AMD06_RS15785 AMD06_RS15790 PF10670 AMD06_RS15790 AMD06_RS15795 PF02424 ApbE family AMD06_RS15800 PF00175 Oxidoreductase NAD-binding domain AMD06_RS15800 PF00258 Flavodoxin AMD06_RS15805 PF13202 EF hand AMD06_RS15805 PF13499 EF-hand domain pair AMD06_RS15810 PF05962 HutD AMD06_RS15815 PF12836 Helix-hairpin-helix motif AMD06_RS15820 PF01546 Peptidase family M20/M25/M40 AMD06_RS15820 PF07687 Peptidase dimerisation domain AMD06_RS15825 PF04226 AMD06_RS15825 AMD06_RS15830 PF01636 Phosphotransferase enzyme family AMD06_RS15835 PF00483 Nucleotidyl transferase AMD06_RS15840 PF00308 Bacterial dnaA protein AMD06_RS15845 PF01594 AMD06_RS15845 AMD06_RS15850 PF09839 AMD06_RS15850 AMD06_RS15855 PF00586 AIR synthase related protein, N-terminal domain AMD06_RS15855 PF02769 AIR synthase related protein, C-terminal domain AMD06_RS15865 PF00551 Formyl transferase AMD06_RS15870 PF11306 Protein of unknown function (DUF3108) AMD06_RS15875 PF11306 Protein of unknown function (DUF3108) AMD06_RS15885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD06_RS15890 PF01722 BolA-like protein AMD06_RS15895 PF00571 CBS domain AMD06_RS15895 PF01380 SIS domain AMD06_RS15900 PF08282 haloacid dehalogenase-like hydrolase AMD06_RS15905 PF06835 Lipopolysaccharide-assembly, LptC-related AMD06_RS15910 PF03968 OstA-like protein AMD06_RS15915 PF00005 ABC transporter AMD06_RS15915 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD06_RS15920 PF00309 AMD06_RS15920 AMD06_RS15920 PF04552 Sigma-54, DNA binding domain AMD06_RS15920 PF04963 Sigma-54 factor, core binding domain AMD06_RS15925 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD06_RS15930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD06_RS15935 PF02603 HPr Serine kinase N terminus AMD06_RS15935 PF07475 HPr Serine kinase C-terminal domain AMD06_RS15940 PF03668 AMD06_RS15940 AMD06_RS15945 PF03610 PTS system fructose IIA component AMD06_RS15950 PF00381 PTS HPr component phosphorylation site AMD06_RS15955 PF00391 PEP-utilising enzyme, mobile domain AMD06_RS15955 PF02896 PEP-utilising enzyme, TIM barrel domain AMD06_RS15955 PF05524 PEP-utilising enzyme, N-terminal AMD06_RS15960 PF00571 CBS domain AMD06_RS15960 PF01769 Divalent cation transporter AMD06_RS15960 PF03448 MgtE intracellular N domain AMD06_RS15965 PF00326 Prolyl oligopeptidase family AMD06_RS15970 PF02322 AMD06_RS15970 AMD06_RS15975 PF01654 AMD06_RS15975 AMD06_RS15980 PF01244 Membrane dipeptidase (Peptidase family M19) AMD06_RS15985 PF00324 Amino acid permease AMD06_RS15990 PF00544 Pectate lyase AMD06_RS16000 PF00561 alpha/beta hydrolase fold AMD06_RS16010 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS16010 PF03472 Autoinducer binding domain AMD06_RS16015 PF13520 Amino acid permease AMD06_RS16020 PF01764 Lipase (class 3) AMD06_RS16025 PF13365 Trypsin-like peptidase domain AMD06_RS16035 PF12706 Beta-lactamase superfamily domain AMD06_RS16040 PF04820 Tryptophan halogenase AMD06_RS16045 PF13621 Cupin-like domain AMD06_RS16050 PF07277 AMD06_RS16050 AMD06_RS16055 PF00593 TonB dependent receptor AMD06_RS16055 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16065 PF00376 MerR family regulatory protein AMD06_RS16065 PF09278 MerR, DNA binding AMD06_RS16070 PF07690 Major Facilitator Superfamily AMD06_RS16080 PF03738 Glutathionylspermidine synthase preATP-grasp AMD06_RS16085 PF06693 AMD06_RS16085 AMD06_RS16090 PF03994 AMD06_RS16090 AMD06_RS16095 PF10679 AMD06_RS16095 AMD06_RS16100 PF07885 Ion channel AMD06_RS16105 PF04012 AMD06_RS16105 AMD06_RS16110 PF09938 AMD06_RS16110 AMD06_RS16115 PF01243 Pyridoxamine 5'-phosphate oxidase AMD06_RS16115 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD06_RS16120 PF01202 Shikimate kinase AMD06_RS16125 PF01761 3-dehydroquinate synthase AMD06_RS16135 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD06_RS16140 PF11747 AMD06_RS16140 AMD06_RS16145 PF11747 AMD06_RS16145 AMD06_RS16150 PF11747 AMD06_RS16150 AMD06_RS16155 PF11747 AMD06_RS16155 AMD06_RS16165 PF11747 AMD06_RS16165 AMD06_RS16170 PF11747 AMD06_RS16170 AMD06_RS16190 PF08924 Domain of unknown function (DUF1906) AMD06_RS16205 PF12833 Helix-turn-helix domain AMD06_RS16205 PF14532 Sigma-54 interaction domain AMD06_RS16210 PF07690 Major Facilitator Superfamily AMD06_RS16215 PF00072 Response regulator receiver domain AMD06_RS16215 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS16215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS16215 PF07494 Two component regulator propeller AMD06_RS16215 PF07495 Y_Y_Y domain AMD06_RS16220 PF00072 Response regulator receiver domain AMD06_RS16220 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS16220 PF07494 Two component regulator propeller AMD06_RS16220 PF07495 Y_Y_Y domain AMD06_RS16230 PF00072 Response regulator receiver domain AMD06_RS16230 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS16230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS16230 PF07494 Two component regulator propeller AMD06_RS16230 PF07495 Y_Y_Y domain AMD06_RS16235 PF04264 YceI-like domain AMD06_RS16240 PF01292 Prokaryotic cytochrome b561 AMD06_RS16245 PF04264 YceI-like domain AMD06_RS16250 PF05768 Glutaredoxin-like domain (DUF836) AMD06_RS16255 PF03313 AMD06_RS16255 AMD06_RS16255 PF03315 Serine dehydratase beta chain AMD06_RS16260 PF00561 alpha/beta hydrolase fold AMD06_RS16265 PF00742 Homoserine dehydrogenase AMD06_RS16265 PF03447 Homoserine dehydrogenase, NAD binding domain AMD06_RS16270 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD06_RS16275 PF00561 alpha/beta hydrolase fold AMD06_RS16280 PF01551 Peptidase family M23 AMD06_RS16285 PF00009 Elongation factor Tu GTP binding domain AMD06_RS16285 PF16658 AMD06_RS16285 AMD06_RS16290 PF03006 AMD06_RS16290 AMD06_RS16295 PF05170 AMD06_RS16295 AMD06_RS16300 PF00571 CBS domain AMD06_RS16305 PF00535 Glycosyl transferase family 2 AMD06_RS16310 PF00912 Transglycosylase AMD06_RS16315 PF01430 Hsp33 protein AMD06_RS16325 PF00593 TonB dependent receptor AMD06_RS16325 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16335 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS16340 PF12146 Putative lysophospholipase AMD06_RS16345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS16345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD06_RS16345 PF09317 AMD06_RS16345 AMD06_RS16350 PF06993 AMD06_RS16350 AMD06_RS16355 PF07690 Major Facilitator Superfamily AMD06_RS16360 PF00144 Beta-lactamase AMD06_RS16370 PF01597 Glycine cleavage H-protein AMD06_RS16375 PF01571 Aminomethyltransferase folate-binding domain AMD06_RS16375 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD06_RS16380 PF01957 NfeD-like C-terminal, partner-binding AMD06_RS16385 PF16200 AMD06_RS16385 AMD06_RS16390 PF02694 AMD06_RS16390 AMD06_RS16395 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD06_RS16400 PF00459 Inositol monophosphatase family AMD06_RS16405 PF00293 NUDIX domain AMD06_RS16410 PF00202 Aminotransferase class-III AMD06_RS16415 PF04452 RNA methyltransferase AMD06_RS16420 PF02685 Glucokinase AMD06_RS16425 PF00593 TonB dependent receptor AMD06_RS16425 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16430 PF01120 Alpha-L-fucosidase AMD06_RS16430 PF16757 AMD06_RS16430 AMD06_RS16435 PF00704 Glycosyl hydrolases family 18 AMD06_RS16440 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD06_RS16440 PF02838 Glycosyl hydrolase family 20, domain 2 AMD06_RS16440 PF13290 AMD06_RS16440 AMD06_RS16445 PF00703 Glycosyl hydrolases family 2 AMD06_RS16450 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD06_RS16450 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD06_RS16450 PF07691 PA14 domain AMD06_RS16450 PF14310 Fibronectin type III-like domain AMD06_RS16455 PF00593 TonB dependent receptor AMD06_RS16455 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16455 PF13620 Carboxypeptidase regulatory-like domain AMD06_RS16460 PF01301 Glycosyl hydrolases family 35 AMD06_RS16465 PF13520 Amino acid permease AMD06_RS16470 PF00294 pfkB family carbohydrate kinase AMD06_RS16475 PF02056 Family 4 glycosyl hydrolase AMD06_RS16475 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD06_RS16480 PF06824 Protein of unknown function (DUF1237) AMD06_RS16485 PF07971 Glycosyl hydrolase family 92 AMD06_RS16490 PF01301 Glycosyl hydrolases family 35 AMD06_RS16505 PF11747 AMD06_RS16505 AMD06_RS16510 PF13088 BNR repeat-like domain AMD06_RS16515 PF13855 Leucine rich repeat AMD06_RS16520 PF03932 CutC family AMD06_RS16525 PF01112 Asparaginase AMD06_RS16535 PF13302 Acetyltransferase (GNAT) domain AMD06_RS16540 PF01584 CheW-like domain AMD06_RS16545 PF01339 CheB methylesterase AMD06_RS16550 PF00072 Response regulator receiver domain AMD06_RS16550 PF01584 CheW-like domain AMD06_RS16550 PF01627 Hpt domain AMD06_RS16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS16550 PF02895 Signal transducing histidine kinase, homodimeric domain AMD06_RS16555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS16560 PF01584 CheW-like domain AMD06_RS16565 PF00072 Response regulator receiver domain AMD06_RS16570 PF00072 Response regulator receiver domain AMD06_RS16575 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD06_RS16575 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD06_RS16580 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS16585 PF03747 ADP-ribosylglycohydrolase AMD06_RS16590 PF00814 Glycoprotease family AMD06_RS16595 PF00270 DEAD/DEAH box helicase AMD06_RS16595 PF13307 Helicase C-terminal domain AMD06_RS16605 PF00905 Penicillin binding protein transpeptidase domain AMD06_RS16605 PF00912 Transglycosylase AMD06_RS16605 PF14814 Bifunctional transglycosylase second domain AMD06_RS16610 PF00535 Glycosyl transferase family 2 AMD06_RS16610 PF13692 Glycosyl transferases group 1 AMD06_RS16620 PF02824 TGS domain AMD06_RS16620 PF04607 Region found in RelA / SpoT proteins AMD06_RS16620 PF13291 ACT domain AMD06_RS16620 PF13328 HD domain AMD06_RS16625 PF12706 Beta-lactamase superfamily domain AMD06_RS16630 PF03070 TENA/THI-4/PQQC family AMD06_RS16635 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD06_RS16640 PF04055 Radical SAM superfamily AMD06_RS16640 PF13186 Iron-sulfur cluster-binding domain AMD06_RS16640 PF13353 4Fe-4S single cluster domain AMD06_RS16650 PF10142 PhoPQ-activated pathogenicity-related protein AMD06_RS16655 PF02685 Glucokinase AMD06_RS16660 PF00593 TonB dependent receptor AMD06_RS16660 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16665 PF00270 DEAD/DEAH box helicase AMD06_RS16665 PF00271 Helicase conserved C-terminal domain AMD06_RS16665 PF04408 Helicase associated domain (HA2) AMD06_RS16665 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD06_RS16665 PF11898 AMD06_RS16665 AMD06_RS16670 PF00210 Ferritin-like domain AMD06_RS16675 PF00270 DEAD/DEAH box helicase AMD06_RS16675 PF00271 Helicase conserved C-terminal domain AMD06_RS16675 PF00570 HRDC domain AMD06_RS16675 PF09382 RQC domain AMD06_RS16675 PF16124 AMD06_RS16675 AMD06_RS16685 PF00072 Response regulator receiver domain AMD06_RS16695 PF01479 S4 domain AMD06_RS16710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS16710 PF00672 HAMP domain AMD06_RS16710 PF12729 AMD06_RS16710 AMD06_RS16715 PF01810 AMD06_RS16715 AMD06_RS16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS16720 PF03466 LysR substrate binding domain AMD06_RS16725 PF00072 Response regulator receiver domain AMD06_RS16730 PF07536 AMD06_RS16730 AMD06_RS16730 PF08448 PAS fold AMD06_RS16735 PF06508 Queuosine biosynthesis protein QueC AMD06_RS16745 PF04055 Radical SAM superfamily AMD06_RS16745 PF13394 4Fe-4S single cluster domain AMD06_RS16750 PF13525 Outer membrane lipoprotein AMD06_RS16750 PF16331 AMD06_RS16750 AMD06_RS16755 PF00691 OmpA family AMD06_RS16760 PF04052 TolB amino-terminal domain AMD06_RS16760 PF07676 WD40-like Beta Propeller Repeat AMD06_RS16765 PF13103 TonB C terminal AMD06_RS16770 PF02472 Biopolymer transport protein ExbD/TolR AMD06_RS16775 PF01618 AMD06_RS16775 AMD06_RS16780 PF03061 Thioesterase superfamily AMD06_RS16785 PF05491 Holliday junction DNA helicase ruvB C-terminus AMD06_RS16785 PF05496 Holliday junction DNA helicase ruvB N-terminus AMD06_RS16795 PF02705 AMD06_RS16795 AMD06_RS16800 PF01330 RuvA N terminal domain AMD06_RS16800 PF07499 RuvA, C-terminal domain AMD06_RS16800 PF14520 Helix-hairpin-helix domain AMD06_RS16805 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD06_RS16810 PF01709 Transcriptional regulator AMD06_RS16815 PF12697 Alpha/beta hydrolase family AMD06_RS16820 PF13673 Acetyltransferase (GNAT) domain AMD06_RS16825 PF00152 tRNA synthetases class II (D, K and N) AMD06_RS16825 PF01336 OB-fold nucleic acid binding domain AMD06_RS16825 PF02938 GAD domain AMD06_RS16830 PF11218 AMD06_RS16830 AMD06_RS16835 PF09723 AMD06_RS16835 AMD06_RS16840 PF07690 Major Facilitator Superfamily AMD06_RS16845 PF00593 TonB dependent receptor AMD06_RS16845 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16860 PF13354 Beta-lactamase enzyme family AMD06_RS16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS16865 PF03466 LysR substrate binding domain AMD06_RS16870 PF14317 AMD06_RS16870 AMD06_RS16875 PF00005 ABC transporter AMD06_RS16875 PF12848 ABC transporter AMD06_RS16875 PF16326 AMD06_RS16875 AMD06_RS16880 PF00593 TonB dependent receptor AMD06_RS16880 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS16895 PF00593 TonB dependent receptor AMD06_RS16895 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16900 PF00593 TonB dependent receptor AMD06_RS16900 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16905 PF00067 Cytochrome P450 AMD06_RS16910 PF00999 Sodium/hydrogen exchanger family AMD06_RS16910 PF02254 TrkA-N domain AMD06_RS16930 PF03328 HpcH/HpaI aldolase/citrate lyase family AMD06_RS16935 PF00593 TonB dependent receptor AMD06_RS16935 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS16940 PF02655 ATP-grasp domain AMD06_RS16945 PF04183 IucA / IucC family AMD06_RS16945 PF06276 Ferric iron reductase FhuF-like transporter AMD06_RS16950 PF07690 Major Facilitator Superfamily AMD06_RS16955 PF04183 IucA / IucC family AMD06_RS16955 PF06276 Ferric iron reductase FhuF-like transporter AMD06_RS16960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD06_RS16960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD06_RS16975 PF02654 AMD06_RS16975 AMD06_RS16980 PF00300 Histidine phosphatase superfamily (branch 1) AMD06_RS16985 PF02277 Phosphoribosyltransferase AMD06_RS16990 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD06_RS16995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD06_RS16995 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD06_RS17000 PF00155 Aminotransferase class I and II AMD06_RS17005 PF03186 AMD06_RS17005 AMD06_RS17010 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD06_RS17010 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD06_RS17025 PF00593 TonB dependent receptor AMD06_RS17025 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS17030 PF00004 ATPase family associated with various cellular activities (AAA) AMD06_RS17030 PF02861 Clp amino terminal domain AMD06_RS17030 PF07724 AAA domain (Cdc48 subfamily) AMD06_RS17030 PF10431 C-terminal, D2-small domain, of ClpB protein AMD06_RS17035 PF00005 ABC transporter AMD06_RS17040 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS17045 PF09084 NMT1/THI5 like AMD06_RS17050 PF00248 Aldo/keto reductase family AMD06_RS17055 PF00296 Luciferase-like monooxygenase AMD06_RS17060 PF00593 TonB dependent receptor AMD06_RS17060 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS17065 PF01541 GIY-YIG catalytic domain AMD06_RS17070 PF14497 Glutathione S-transferase, C-terminal domain AMD06_RS17075 PF11219 AMD06_RS17075 AMD06_RS17080 PF07007 Protein of unknown function (DUF1311) AMD06_RS17095 PF12098 AMD06_RS17095 AMD06_RS17100 PF00593 TonB dependent receptor AMD06_RS17100 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS17105 PF02358 Trehalose-phosphatase AMD06_RS17110 PF00723 Glycosyl hydrolases family 15 AMD06_RS17115 PF00982 Glycosyltransferase family 20 AMD06_RS17120 PF01011 PQQ enzyme repeat AMD06_RS17120 PF13360 PQQ-like domain AMD06_RS17125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS17130 PF04134 AMD06_RS17130 AMD06_RS17135 PF13761 AMD06_RS17135 AMD06_RS17140 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD06_RS17145 PF00849 RNA pseudouridylate synthase AMD06_RS17150 PF13525 Outer membrane lipoprotein AMD06_RS17160 PF00795 Carbon-nitrogen hydrolase AMD06_RS17160 PF02540 NAD synthase AMD06_RS17165 PF04480 Protein of unknown function (DUF559) AMD06_RS17170 PF01527 Transposase AMD06_RS17180 PF13333 AMD06_RS17180 AMD06_RS17190 PF01471 Putative peptidoglycan binding domain AMD06_RS17190 PF13406 Transglycosylase SLT domain AMD06_RS17195 PF01526 AMD06_RS17195 AMD06_RS17195 PF13700 AMD06_RS17195 AMD06_RS17235 PF01695 IstB-like ATP binding protein AMD06_RS17255 PF01527 Transposase AMD06_RS17260 PF00665 Integrase core domain AMD06_RS17260 PF13276 AMD06_RS17260 AMD06_RS17285 PF12811 AMD06_RS17285 AMD06_RS17290 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD06_RS17295 PF02627 Carboxymuconolactone decarboxylase family AMD06_RS17300 PF00462 Glutaredoxin AMD06_RS17305 PF01435 Peptidase family M48 AMD06_RS17310 PF00072 Response regulator receiver domain AMD06_RS17310 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS17315 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS17315 PF11808 AMD06_RS17315 AMD06_RS17320 PF02503 Polyphosphate kinase middle domain AMD06_RS17320 PF13089 Polyphosphate kinase N-terminal domain AMD06_RS17320 PF13090 Polyphosphate kinase C-terminal domain AMD06_RS17325 PF02541 Ppx/GppA phosphatase family AMD06_RS17330 PF00534 Glycosyl transferases group 1 AMD06_RS17330 PF13439 Glycosyltransferase Family 4 AMD06_RS17335 PF01569 PAP2 superfamily AMD06_RS17340 PF00149 Calcineurin-like phosphoesterase AMD06_RS17350 PF13688 Metallo-peptidase family M12 AMD06_RS17365 PF13522 Glutamine amidotransferase domain AMD06_RS17370 PF02674 AMD06_RS17370 AMD06_RS17375 PF05036 Sporulation related domain AMD06_RS17380 PF08245 Mur ligase middle domain AMD06_RS17385 PF00300 Histidine phosphatase superfamily (branch 1) AMD06_RS17390 PF10459 Peptidase S46 AMD06_RS17395 PF10459 Peptidase S46 AMD06_RS17400 PF04185 Phosphoesterase family AMD06_RS17400 PF05506 AMD06_RS17400 AMD06_RS17405 PF00593 TonB dependent receptor AMD06_RS17405 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS17410 PF00107 Zinc-binding dehydrogenase AMD06_RS17410 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS17415 PF09694 AMD06_RS17415 AMD06_RS17420 PF00005 ABC transporter AMD06_RS17420 PF12857 AMD06_RS17420 AMD06_RS17425 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS17435 PF13531 Bacterial extracellular solute-binding protein AMD06_RS17440 PF00155 Aminotransferase class I and II AMD06_RS17450 PF00849 RNA pseudouridylate synthase AMD06_RS17450 PF01479 S4 domain AMD06_RS17460 PF00691 OmpA family AMD06_RS17460 PF13505 Outer membrane protein beta-barrel domain AMD06_RS17470 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS17470 PF13602 Zinc-binding dehydrogenase AMD06_RS17475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD06_RS17475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS17480 PF07486 Cell Wall Hydrolase AMD06_RS17485 PF00043 Glutathione S-transferase, C-terminal domain AMD06_RS17485 PF02798 Glutathione S-transferase, N-terminal domain AMD06_RS17490 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD06_RS17490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD06_RS17495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD06_RS17500 PF00009 Elongation factor Tu GTP binding domain AMD06_RS17500 PF00679 Elongation factor G C-terminus AMD06_RS17500 PF03144 Elongation factor Tu domain 2 AMD06_RS17505 PF09900 AMD06_RS17505 AMD06_RS17510 PF01425 Amidase AMD06_RS17515 PF00924 Mechanosensitive ion channel AMD06_RS17520 PF01474 Class-II DAHP synthetase family AMD06_RS17525 PF00593 TonB dependent receptor AMD06_RS17525 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS17535 PF02600 Disulfide bond formation protein DsbB AMD06_RS17540 PF01196 Ribosomal protein L17 AMD06_RS17545 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD06_RS17545 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD06_RS17545 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD06_RS17550 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD06_RS17550 PF01479 S4 domain AMD06_RS17555 PF00411 Ribosomal protein S11 AMD06_RS17560 PF00416 Ribosomal protein S13/S18 AMD06_RS17565 PF00344 SecY translocase AMD06_RS17570 PF00828 Ribosomal protein L18e/L15 AMD06_RS17575 PF00327 Ribosomal protein L30p/L7e AMD06_RS17580 PF00333 Ribosomal protein S5, N-terminal domain AMD06_RS17580 PF03719 Ribosomal protein S5, C-terminal domain AMD06_RS17585 PF00861 Ribosomal L18p/L5e family AMD06_RS17590 PF00347 Ribosomal protein L6 AMD06_RS17595 PF00410 Ribosomal protein S8 AMD06_RS17600 PF00253 Ribosomal protein S14p/S29e AMD06_RS17605 PF00281 Ribosomal protein L5 AMD06_RS17605 PF00673 ribosomal L5P family C-terminus AMD06_RS17610 PF00467 KOW motif AMD06_RS17610 PF17136 AMD06_RS17610 AMD06_RS17615 PF00238 Ribosomal protein L14p/L23e AMD06_RS17620 PF00366 Ribosomal protein S17 AMD06_RS17625 PF00831 Ribosomal L29 protein AMD06_RS17630 PF00252 Ribosomal protein L16p/L10e AMD06_RS17635 PF00189 Ribosomal protein S3, C-terminal domain AMD06_RS17635 PF07650 KH domain AMD06_RS17640 PF00237 Ribosomal protein L22p/L17e AMD06_RS17645 PF00203 Ribosomal protein S19 AMD06_RS17650 PF00181 Ribosomal Proteins L2, RNA binding domain AMD06_RS17650 PF03947 Ribosomal Proteins L2, C-terminal domain AMD06_RS17655 PF00276 Ribosomal protein L23 AMD06_RS17660 PF00573 Ribosomal protein L4/L1 family AMD06_RS17665 PF00297 Ribosomal protein L3 AMD06_RS17670 PF00338 Ribosomal protein S10p/S20e AMD06_RS17675 PF00009 Elongation factor Tu GTP binding domain AMD06_RS17675 PF03143 Elongation factor Tu C-terminal domain AMD06_RS17675 PF03144 Elongation factor Tu domain 2 AMD06_RS17680 PF00009 Elongation factor Tu GTP binding domain AMD06_RS17680 PF00679 Elongation factor G C-terminus AMD06_RS17680 PF03144 Elongation factor Tu domain 2 AMD06_RS17680 PF03764 Elongation factor G, domain IV AMD06_RS17680 PF14492 Elongation Factor G, domain II AMD06_RS17685 PF00177 Ribosomal protein S7p/S5e AMD06_RS17690 PF00164 Ribosomal protein S12/S23 AMD06_RS17695 PF00623 RNA polymerase Rpb1, domain 2 AMD06_RS17695 PF04983 RNA polymerase Rpb1, domain 3 AMD06_RS17695 PF04997 RNA polymerase Rpb1, domain 1 AMD06_RS17695 PF04998 RNA polymerase Rpb1, domain 5 AMD06_RS17695 PF05000 RNA polymerase Rpb1, domain 4 AMD06_RS17700 PF00562 RNA polymerase Rpb2, domain 6 AMD06_RS17700 PF04560 RNA polymerase Rpb2, domain 7 AMD06_RS17700 PF04561 RNA polymerase Rpb2, domain 2 AMD06_RS17700 PF04563 RNA polymerase beta subunit AMD06_RS17700 PF04565 RNA polymerase Rpb2, domain 3 AMD06_RS17700 PF10385 RNA polymerase beta subunit external 1 domain AMD06_RS17705 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD06_RS17705 PF16320 AMD06_RS17705 AMD06_RS17710 PF00466 Ribosomal protein L10 AMD06_RS17715 PF00687 Ribosomal protein L1p/L10e family AMD06_RS17720 PF00298 Ribosomal protein L11, RNA binding domain AMD06_RS17720 PF03946 Ribosomal protein L11, N-terminal domain AMD06_RS17725 PF00467 KOW motif AMD06_RS17725 PF02357 Transcription termination factor nusG AMD06_RS17730 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD06_RS17740 PF00009 Elongation factor Tu GTP binding domain AMD06_RS17740 PF03143 Elongation factor Tu C-terminal domain AMD06_RS17740 PF03144 Elongation factor Tu domain 2 AMD06_RS17760 PF01926 50S ribosome-binding GTPase AMD06_RS17760 PF06071 Protein of unknown function (DUF933) AMD06_RS17765 PF01195 Peptidyl-tRNA hydrolase AMD06_RS17770 PF01386 Ribosomal L25p family AMD06_RS17770 PF14693 Ribosomal protein TL5, C-terminal domain AMD06_RS17775 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD06_RS17775 PF14572 Phosphoribosyl synthetase-associated domain AMD06_RS17785 PF00288 GHMP kinases N terminal domain AMD06_RS17785 PF08544 GHMP kinases C terminal AMD06_RS17790 PF03550 Outer membrane lipoprotein LolB AMD06_RS17795 PF13429 Tetratricopeptide repeat AMD06_RS17800 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD06_RS17800 PF01488 Shikimate / quinate 5-dehydrogenase AMD06_RS17800 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD06_RS17805 PF00472 RF-1 domain AMD06_RS17805 PF03462 PCRF domain AMD06_RS17810 PF13844 Glycosyl transferase family 41 AMD06_RS17810 PF14559 Tetratricopeptide repeat AMD06_RS17815 PF00994 Probable molybdopterin binding domain AMD06_RS17820 PF03976 Polyphosphate kinase 2 (PPK2) AMD06_RS17830 PF00708 Acylphosphatase AMD06_RS17835 PF00578 AhpC/TSA family AMD06_RS17840 PF03631 AMD06_RS17840 AMD06_RS17845 PF03358 NADPH-dependent FMN reductase AMD06_RS17850 PF09842 AMD06_RS17850 AMD06_RS17860 PF00710 Asparaginase AMD06_RS17865 PF04073 Aminoacyl-tRNA editing domain AMD06_RS17870 PF00082 Subtilase family AMD06_RS17870 PF04151 Bacterial pre-peptidase C-terminal domain AMD06_RS17875 PF00082 Subtilase family AMD06_RS17880 PF00082 Subtilase family AMD06_RS17880 PF04151 Bacterial pre-peptidase C-terminal domain AMD06_RS17885 PF01063 Aminotransferase class IV AMD06_RS17890 PF01883 Domain of unknown function DUF59 AMD06_RS17900 PF02233 NAD(P) transhydrogenase beta subunit AMD06_RS17905 PF12769 Domain of unknown function (DUF3814) AMD06_RS17910 PF04542 Sigma-70 region 2 AMD06_RS17910 PF08281 Sigma-70, region 4 AMD06_RS17920 PF11304 AMD06_RS17920 AMD06_RS17925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD06_RS17925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD06_RS17930 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS17930 PF13305 WHG domain AMD06_RS17935 PF12146 Putative lysophospholipase AMD06_RS17940 PF07793 AMD06_RS17940 AMD06_RS17945 PF07793 AMD06_RS17945 AMD06_RS17950 PF00881 Nitroreductase family AMD06_RS17955 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD06_RS17955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD06_RS17960 PF00293 NUDIX domain AMD06_RS17965 PF05013 N-formylglutamate amidohydrolase AMD06_RS17970 PF00561 alpha/beta hydrolase fold AMD06_RS17975 PF05175 Methyltransferase small domain AMD06_RS17980 PF00578 AhpC/TSA family AMD06_RS17980 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD06_RS17985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS17985 PF13192 Thioredoxin domain AMD06_RS17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS17990 PF03466 LysR substrate binding domain AMD06_RS17995 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD06_RS17995 PF14760 Rnk N-terminus AMD06_RS18000 PF00923 Transaldolase AMD06_RS18005 PF01965 DJ-1/PfpI family AMD06_RS18010 PF01625 Peptide methionine sulfoxide reductase AMD06_RS18015 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD06_RS18020 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS18025 PF00072 Response regulator receiver domain AMD06_RS18025 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS18025 PF00672 HAMP domain AMD06_RS18025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS18025 PF05227 CHASE3 domain AMD06_RS18030 PF00072 Response regulator receiver domain AMD06_RS18035 PF09413 Domain of unknown function (DUF2007) AMD06_RS18040 PF13409 Glutathione S-transferase, N-terminal domain AMD06_RS18045 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD06_RS18045 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD06_RS18075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD06_RS18080 PF01728 FtsJ-like methyltransferase AMD06_RS18085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD06_RS18090 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD06_RS18100 PF13202 EF hand AMD06_RS18105 PF12802 MarR family AMD06_RS18110 PF00378 Enoyl-CoA hydratase/isomerase family AMD06_RS18115 PF00171 Aldehyde dehydrogenase family AMD06_RS18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS18125 PF03466 LysR substrate binding domain AMD06_RS18130 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD06_RS18135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD06_RS18140 PF00392 Bacterial regulatory proteins, gntR family AMD06_RS18140 PF07729 FCD domain AMD06_RS18145 PF13557 AMD06_RS18145 AMD06_RS18150 PF13577 SnoaL-like domain AMD06_RS18155 PF12697 Alpha/beta hydrolase family AMD06_RS18160 PF01494 FAD binding domain AMD06_RS18165 PF01494 FAD binding domain AMD06_RS18175 PF01923 Cobalamin adenosyltransferase AMD06_RS18180 PF00850 Histone deacetylase domain AMD06_RS18185 PF00850 Histone deacetylase domain AMD06_RS18190 PF03968 OstA-like protein AMD06_RS18190 PF04453 Organic solvent tolerance protein AMD06_RS18195 PF00639 PPIC-type PPIASE domain AMD06_RS18195 PF09312 SurA N-terminal domain AMD06_RS18195 PF13616 PPIC-type PPIASE domain AMD06_RS18200 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD06_RS18205 PF00398 Ribosomal RNA adenine dimethylase AMD06_RS18210 PF04379 Protein of unknown function (DUF525) AMD06_RS18215 PF00149 Calcineurin-like phosphoesterase AMD06_RS18220 PF00005 ABC transporter AMD06_RS18220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD06_RS18225 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS18230 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS18235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD06_RS18240 PF00296 Luciferase-like monooxygenase AMD06_RS18245 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS18255 PF00593 TonB dependent receptor AMD06_RS18255 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS18260 PF03358 NADPH-dependent FMN reductase AMD06_RS18265 PF00296 Luciferase-like monooxygenase AMD06_RS18270 PF09084 NMT1/THI5 like AMD06_RS18275 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS18280 PF00005 ABC transporter AMD06_RS18285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD06_RS18285 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD06_RS18290 PF00158 Sigma-54 interaction domain AMD06_RS18295 PF00186 Dihydrofolate reductase AMD06_RS18305 PF00303 Thymidylate synthase AMD06_RS18310 PF01790 AMD06_RS18310 AMD06_RS18315 PF04536 TLP18 AMD06_RS18320 PF04536 TLP18 AMD06_RS18325 PF04011 LemA family AMD06_RS18330 PF01219 Prokaryotic diacylglycerol kinase AMD06_RS18335 PF13472 GDSL-like Lipase/Acylhydrolase family AMD06_RS18340 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS18345 PF00072 Response regulator receiver domain AMD06_RS18345 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS18350 PF13472 GDSL-like Lipase/Acylhydrolase family AMD06_RS18355 PF00005 ABC transporter AMD06_RS18360 PF02687 AMD06_RS18360 AMD06_RS18365 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD06_RS18370 PF13379 NMT1-like family AMD06_RS18375 PF00005 ABC transporter AMD06_RS18380 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS18385 PF04342 AMD06_RS18385 AMD06_RS18400 PF00593 TonB dependent receptor AMD06_RS18400 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS18405 PF10636 Hemin uptake protein hemP AMD06_RS18410 PF00248 Aldo/keto reductase family AMD06_RS18415 PF01773 Na+ dependent nucleoside transporter N-terminus AMD06_RS18415 PF07662 Na+ dependent nucleoside transporter C-terminus AMD06_RS18415 PF07670 Nucleoside recognition AMD06_RS18420 PF00294 pfkB family carbohydrate kinase AMD06_RS18425 PF08306 Glycosyl hydrolase family 98 AMD06_RS18425 PF08307 Glycosyl hydrolase family 98 C-terminal domain AMD06_RS18425 PF16990 AMD06_RS18425 AMD06_RS18430 PF01207 Dihydrouridine synthase (Dus) AMD06_RS18435 PF08241 Methyltransferase domain AMD06_RS18440 PF04307 AMD06_RS18440 AMD06_RS18445 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD06_RS18445 PF02772 S-adenosylmethionine synthetase, central domain AMD06_RS18445 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD06_RS18450 PF00328 Histidine phosphatase superfamily (branch 2) AMD06_RS18455 PF00593 TonB dependent receptor AMD06_RS18455 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS18470 PF13387 AMD06_RS18470 AMD06_RS18475 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS18480 PF00311 Phosphoenolpyruvate carboxylase AMD06_RS18485 PF00326 Prolyl oligopeptidase family AMD06_RS18490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD06_RS18490 PF05221 S-adenosyl-L-homocysteine hydrolase AMD06_RS18495 PF13649 Methyltransferase domain AMD06_RS18500 PF00685 Sulfotransferase domain AMD06_RS18510 PF11539 Protein of unknown function (DUF3228) AMD06_RS18515 PF09831 AMD06_RS18515 AMD06_RS18525 PF00128 Alpha amylase, catalytic domain AMD06_RS18530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD06_RS18540 PF00082 Subtilase family AMD06_RS18540 PF09286 Pro-kumamolisin, activation domain AMD06_RS18545 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS18545 PF13602 Zinc-binding dehydrogenase AMD06_RS18550 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD06_RS18565 PF00293 NUDIX domain AMD06_RS18565 PF02581 Thiamine monophosphate synthase/TENI AMD06_RS18570 PF01043 SecA preprotein cross-linking domain AMD06_RS18570 PF02810 SEC-C motif AMD06_RS18570 PF07516 SecA Wing and Scaffold domain AMD06_RS18570 PF07517 SecA DEAD-like domain AMD06_RS18575 PF01551 Peptidase family M23 AMD06_RS18580 PF05258 AMD06_RS18580 AMD06_RS18585 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD06_RS18590 PF00091 Tubulin/FtsZ family, GTPase domain AMD06_RS18590 PF12327 FtsZ family, C-terminal domain AMD06_RS18595 PF02491 SHS2 domain inserted in FTSA AMD06_RS18595 PF14450 Cell division protein FtsA AMD06_RS18600 PF03799 Cell division protein FtsQ AMD06_RS18600 PF08478 POTRA domain, FtsQ-type AMD06_RS18605 PF01820 D-ala D-ala ligase N-terminus AMD06_RS18605 PF07478 D-ala D-ala ligase C-terminus AMD06_RS18610 PF01225 Mur ligase family, catalytic domain AMD06_RS18610 PF02875 Mur ligase family, glutamate ligase domain AMD06_RS18610 PF08245 Mur ligase middle domain AMD06_RS18615 PF03033 Glycosyltransferase family 28 N-terminal domain AMD06_RS18615 PF04101 Glycosyltransferase family 28 C-terminal domain AMD06_RS18620 PF03033 Glycosyltransferase family 28 N-terminal domain AMD06_RS18620 PF04101 Glycosyltransferase family 28 C-terminal domain AMD06_RS18625 PF01098 AMD06_RS18625 AMD06_RS18630 PF00953 Glycosyl transferase family 4 AMD06_RS18635 PF01225 Mur ligase family, catalytic domain AMD06_RS18635 PF02875 Mur ligase family, glutamate ligase domain AMD06_RS18635 PF08245 Mur ligase middle domain AMD06_RS18640 PF01225 Mur ligase family, catalytic domain AMD06_RS18640 PF02875 Mur ligase family, glutamate ligase domain AMD06_RS18640 PF08245 Mur ligase middle domain AMD06_RS18645 PF00905 Penicillin binding protein transpeptidase domain AMD06_RS18645 PF03717 Penicillin-binding Protein dimerisation domain AMD06_RS18650 PF04999 AMD06_RS18650 AMD06_RS18655 PF01795 MraW methylase family AMD06_RS18660 PF02381 MraZ protein AMD06_RS18665 PF05742 AMD06_RS18665 AMD06_RS18670 PF07362 Post-segregation antitoxin CcdA AMD06_RS18675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD06_RS18680 PF04348 LppC putative lipoprotein AMD06_RS18685 PF02021 Uncharacterised protein family UPF0102 AMD06_RS18690 PF04307 AMD06_RS18690 AMD06_RS18695 PF01565 FAD binding domain AMD06_RS18695 PF02913 FAD linked oxidases, C-terminal domain AMD06_RS18700 PF07007 Protein of unknown function (DUF1311) AMD06_RS18710 PF00072 Response regulator receiver domain AMD06_RS18710 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS18715 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS18715 PF00582 Universal stress protein family AMD06_RS18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS18715 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD06_RS18715 PF13493 Domain of unknown function (DUF4118) AMD06_RS18720 PF02669 AMD06_RS18720 AMD06_RS18725 PF00122 E1-E2 ATPase AMD06_RS18725 PF00702 haloacid dehalogenase-like hydrolase AMD06_RS18730 PF03814 AMD06_RS18730 AMD06_RS18735 PF09604 AMD06_RS18735 AMD06_RS18740 PF00646 F-box domain AMD06_RS18745 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD06_RS18745 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD06_RS18750 PF00586 AIR synthase related protein, N-terminal domain AMD06_RS18750 PF02769 AIR synthase related protein, C-terminal domain AMD06_RS18755 PF01029 NusB family AMD06_RS18760 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD06_RS18765 PF00925 GTP cyclohydrolase II AMD06_RS18765 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD06_RS18770 PF00677 Lumazine binding domain AMD06_RS18780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD06_RS18780 PF01872 RibD C-terminal domain AMD06_RS18785 PF00583 Acetyltransferase (GNAT) family AMD06_RS18790 PF03477 ATP cone domain AMD06_RS18795 PF00464 Serine hydroxymethyltransferase AMD06_RS18800 PF11776 Domain of unknown function (DUF3315) AMD06_RS18805 PF00005 ABC transporter AMD06_RS18805 PF12848 ABC transporter AMD06_RS18815 PF00892 EamA-like transporter family AMD06_RS18820 PF02567 Phenazine biosynthesis-like protein AMD06_RS18825 PF00155 Aminotransferase class I and II AMD06_RS18825 PF00392 Bacterial regulatory proteins, gntR family AMD06_RS18835 PF00756 Putative esterase AMD06_RS18840 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD06_RS18845 PF00107 Zinc-binding dehydrogenase AMD06_RS18845 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS18850 PF02583 Metal-sensitive transcriptional repressor AMD06_RS18860 PF00534 Glycosyl transferases group 1 AMD06_RS18865 PF00072 Response regulator receiver domain AMD06_RS18865 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS18870 PF00672 HAMP domain AMD06_RS18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS18875 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD06_RS18880 PF12833 Helix-turn-helix domain AMD06_RS18885 PF00753 Metallo-beta-lactamase superfamily AMD06_RS18890 PF01926 50S ribosome-binding GTPase AMD06_RS18895 PF00034 Cytochrome c AMD06_RS18900 PF13462 Thioredoxin AMD06_RS18905 PF01323 DSBA-like thioredoxin domain AMD06_RS18910 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS18915 PF02028 BCCT family transporter AMD06_RS18920 PF00171 Aldehyde dehydrogenase family AMD06_RS18925 PF00732 GMC oxidoreductase AMD06_RS18925 PF05199 GMC oxidoreductase AMD06_RS18930 PF01743 Poly A polymerase head domain AMD06_RS18930 PF01966 HD domain AMD06_RS18930 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD06_RS18935 PF00593 TonB dependent receptor AMD06_RS18935 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS18940 PF01979 Amidohydrolase family AMD06_RS18945 PF01380 SIS domain AMD06_RS18950 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS18950 PF13377 Periplasmic binding protein-like domain AMD06_RS18955 PF07690 Major Facilitator Superfamily AMD06_RS18960 PF00392 Bacterial regulatory proteins, gntR family AMD06_RS18960 PF07702 UTRA domain AMD06_RS18965 PF07786 AMD06_RS18965 AMD06_RS18970 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain AMD06_RS18970 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain AMD06_RS18970 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain AMD06_RS18975 PF00703 Glycosyl hydrolases family 2 AMD06_RS18975 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD06_RS18975 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD06_RS18975 PF16355 AMD06_RS18975 AMD06_RS18980 PF00593 TonB dependent receptor AMD06_RS18980 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS18985 PF01203 AMD06_RS18985 AMD06_RS18990 PF04612 Type II secretion system (T2SS), protein M AMD06_RS18995 PF05134 Type II secretion system (T2SS), protein L AMD06_RS18995 PF12693 GspL periplasmic domain AMD06_RS19000 PF03934 Type II secretion system (T2SS), protein K AMD06_RS19005 PF11612 Type II secretion system (T2SS), protein J AMD06_RS19005 PF13544 AMD06_RS19005 AMD06_RS19010 PF02501 Type II secretion system (T2SS), protein I AMD06_RS19010 PF13633 Prokaryotic N-terminal methylation site AMD06_RS19015 PF12019 Type II transport protein GspH AMD06_RS19020 PF08334 Type II secretion system (T2SS), protein G AMD06_RS19020 PF13544 AMD06_RS19020 AMD06_RS19025 PF00482 Type II secretion system (T2SS), protein F AMD06_RS19030 PF00437 Type II/IV secretion system protein AMD06_RS19035 PF00263 AMD06_RS19035 AMD06_RS19035 PF03958 Bacterial type II/III secretion system short domain AMD06_RS19040 PF11356 Type IV pilus biogenesis AMD06_RS19040 PF13180 PDZ domain AMD06_RS19045 PF00593 TonB dependent receptor AMD06_RS19045 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS19055 PF13640 2OG-Fe(II) oxygenase superfamily AMD06_RS19060 PF00593 TonB dependent receptor AMD06_RS19060 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS19065 PF04892 AMD06_RS19065 AMD06_RS19070 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AMD06_RS19075 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS19080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD06_RS19085 PF00072 Response regulator receiver domain AMD06_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS19090 PF00072 Response regulator receiver domain AMD06_RS19095 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS19095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS19095 PF05227 CHASE3 domain AMD06_RS19095 PF13188 PAS domain AMD06_RS19100 PF04972 BON domain AMD06_RS19105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD06_RS19105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD06_RS19110 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD06_RS19110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD06_RS19120 PF05433 AMD06_RS19120 AMD06_RS19125 PF10001 AMD06_RS19125 AMD06_RS19130 PF01555 DNA methylase AMD06_RS19140 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD06_RS19145 PF00293 NUDIX domain AMD06_RS19145 PF01467 Cytidylyltransferase AMD06_RS19150 PF03372 Endonuclease/Exonuclease/phosphatase family AMD06_RS19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS19155 PF03466 LysR substrate binding domain AMD06_RS19160 PF01925 AMD06_RS19160 AMD06_RS19165 PF00595 PDZ domain (Also known as DHR or GLGF) AMD06_RS19165 PF03572 Peptidase family S41 AMD06_RS19165 PF11818 AMD06_RS19165 AMD06_RS19170 PF04055 Radical SAM superfamily AMD06_RS19170 PF16881 AMD06_RS19170 AMD06_RS19175 PF03099 Biotin/lipoate A/B protein ligase family AMD06_RS19180 PF04359 Protein of unknown function (DUF493) AMD06_RS19185 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) AMD06_RS19190 PF00768 D-alanyl-D-alanine carboxypeptidase AMD06_RS19190 PF07943 Penicillin-binding protein 5, C-terminal domain AMD06_RS19200 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AMD06_RS19200 PF05036 Sporulation related domain AMD06_RS19205 PF13406 Transglycosylase SLT domain AMD06_RS19210 PF00295 Glycosyl hydrolases family 28 AMD06_RS19215 PF01098 AMD06_RS19215 AMD06_RS19220 PF00905 Penicillin binding protein transpeptidase domain AMD06_RS19220 PF03717 Penicillin-binding Protein dimerisation domain AMD06_RS19225 PF04093 AMD06_RS19225 AMD06_RS19230 PF04085 rod shape-determining protein MreC AMD06_RS19235 PF06723 MreB/Mbl protein AMD06_RS19240 PF00294 pfkB family carbohydrate kinase AMD06_RS19245 PF00158 Sigma-54 interaction domain AMD06_RS19245 PF02954 Bacterial regulatory protein, Fis family AMD06_RS19250 PF00593 TonB dependent receptor AMD06_RS19250 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS19255 PF00107 Zinc-binding dehydrogenase AMD06_RS19255 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS19260 PF10282 Lactonase, 7-bladed beta-propeller AMD06_RS19265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD06_RS19270 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD06_RS19270 PF12796 Ankyrin repeats (3 copies) AMD06_RS19270 PF13857 Ankyrin repeats (many copies) AMD06_RS19275 PF13360 PQQ-like domain AMD06_RS19275 PF13570 PQQ-like domain AMD06_RS19280 PF00702 haloacid dehalogenase-like hydrolase AMD06_RS19295 PF01433 Peptidase family M1 AMD06_RS19295 PF09127 Leukotriene A4 hydrolase, C-terminal AMD06_RS19300 PF00672 HAMP domain AMD06_RS19300 PF00990 GGDEF domain AMD06_RS19305 PF01209 ubiE/COQ5 methyltransferase family AMD06_RS19310 PF07690 Major Facilitator Superfamily AMD06_RS19315 PF16576 AMD06_RS19315 AMD06_RS19320 PF13673 Acetyltransferase (GNAT) domain AMD06_RS19325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD06_RS19330 PF00004 ATPase family associated with various cellular activities (AAA) AMD06_RS19330 PF07724 AAA domain (Cdc48 subfamily) AMD06_RS19330 PF10431 C-terminal, D2-small domain, of ClpB protein AMD06_RS19335 PF00227 Proteasome subunit AMD06_RS19340 PF00589 Phage integrase family AMD06_RS19340 PF02899 Phage integrase, N-terminal SAM-like domain AMD06_RS19345 PF04340 Protein of unknown function, DUF484 AMD06_RS19350 PF01678 Diaminopimelate epimerase AMD06_RS19355 PF13627 AMD06_RS19355 AMD06_RS19360 PF04304 AMD06_RS19360 AMD06_RS19365 PF00326 Prolyl oligopeptidase family AMD06_RS19365 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD06_RS19370 PF00155 Aminotransferase class I and II AMD06_RS19380 PF00326 Prolyl oligopeptidase family AMD06_RS19380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD06_RS19390 PF08212 Lipocalin-like domain AMD06_RS19395 PF08279 HTH domain AMD06_RS19395 PF13280 AMD06_RS19395 AMD06_RS19400 PF04338 Protein of unknown function, DUF481 AMD06_RS19405 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD06_RS19405 PF03900 Porphobilinogen deaminase, C-terminal domain AMD06_RS19410 PF00072 Response regulator receiver domain AMD06_RS19410 PF04397 LytTr DNA-binding domain AMD06_RS19415 PF06580 AMD06_RS19415 AMD06_RS19420 PF02230 Phospholipase/Carboxylesterase AMD06_RS19425 PF13632 Glycosyl transferase family group 2 AMD06_RS19435 PF02225 PA domain AMD06_RS19435 PF04389 Peptidase family M28 AMD06_RS19440 PF00990 GGDEF domain AMD06_RS19455 PF00150 Cellulase (glycosyl hydrolase family 5) AMD06_RS19455 PF00553 Cellulose binding domain AMD06_RS19460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS19460 PF00672 HAMP domain AMD06_RS19460 PF17200 AMD06_RS19460 AMD06_RS19465 PF00990 GGDEF domain AMD06_RS19465 PF01590 GAF domain AMD06_RS19465 PF08447 PAS fold AMD06_RS19465 PF08448 PAS fold AMD06_RS19470 PF00675 Insulinase (Peptidase family M16) AMD06_RS19470 PF05193 Peptidase M16 inactive domain AMD06_RS19495 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD06_RS19495 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD06_RS19500 PF01904 Protein of unknown function DUF72 AMD06_RS19505 PF01204 Trehalase AMD06_RS19510 PF01987 Mitochondrial biogenesis AIM24 AMD06_RS19515 PF01544 CorA-like Mg2+ transporter protein AMD06_RS19525 PF00324 Amino acid permease AMD06_RS19535 PF01695 IstB-like ATP binding protein AMD06_RS19540 PF00665 Integrase core domain AMD06_RS19540 PF13936 Helix-turn-helix domain AMD06_RS19545 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD06_RS19550 PF00892 EamA-like transporter family AMD06_RS19555 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMD06_RS19585 PF07759 AMD06_RS19585 AMD06_RS19590 PF00326 Prolyl oligopeptidase family AMD06_RS19590 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD06_RS19595 PF12823 AMD06_RS19595 AMD06_RS19600 PF05708 Orthopoxvirus protein of unknown function (DUF830) AMD06_RS19610 PF13548 AMD06_RS19610 AMD06_RS19615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS19620 PF13409 Glutathione S-transferase, N-terminal domain AMD06_RS19620 PF13410 Glutathione S-transferase, C-terminal domain AMD06_RS19625 PF01145 SPFH domain / Band 7 family AMD06_RS19630 PF14412 AMD06_RS19630 AMD06_RS19635 PF07791 AMD06_RS19635 AMD06_RS19645 PF04002 RadC-like JAB domain AMD06_RS19660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS19670 PF08448 PAS fold AMD06_RS19675 PF00665 Integrase core domain AMD06_RS19675 PF13936 Helix-turn-helix domain AMD06_RS19680 PF01695 IstB-like ATP binding protein AMD06_RS19705 PF00873 AcrB/AcrD/AcrF family AMD06_RS19710 PF16576 AMD06_RS19710 AMD06_RS19715 PF00009 Elongation factor Tu GTP binding domain AMD06_RS19715 PF01583 Adenylylsulphate kinase AMD06_RS19720 PF01507 Phosphoadenosine phosphosulfate reductase family AMD06_RS19725 PF00175 Oxidoreductase NAD-binding domain AMD06_RS19725 PF00258 Flavodoxin AMD06_RS19725 PF00667 FAD binding domain AMD06_RS19730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD06_RS19730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD06_RS19735 PF01507 Phosphoadenosine phosphosulfate reductase family AMD06_RS19740 PF03929 AMD06_RS19740 AMD06_RS19745 PF00593 TonB dependent receptor AMD06_RS19745 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS19755 PF01590 GAF domain AMD06_RS19755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS19770 PF03466 LysR substrate binding domain AMD06_RS19775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD06_RS19780 PF00291 Pyridoxal-phosphate dependent enzyme AMD06_RS19785 PF04191 Phospholipid methyltransferase AMD06_RS19790 PF01661 Macro domain AMD06_RS19795 PF00274 Fructose-bisphosphate aldolase class-I AMD06_RS19800 PF00224 Pyruvate kinase, barrel domain AMD06_RS19800 PF02887 Pyruvate kinase, alpha/beta domain AMD06_RS19805 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS19810 PF00162 Phosphoglycerate kinase AMD06_RS19815 PF13163 AMD06_RS19815 AMD06_RS19820 PF10101 AMD06_RS19820 AMD06_RS19830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD06_RS19830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD06_RS19835 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD06_RS19840 PF03922 OmpW family AMD06_RS19845 PF03922 OmpW family AMD06_RS19850 PF02265 S1/P1 Nuclease AMD06_RS19855 PF00753 Metallo-beta-lactamase superfamily AMD06_RS19860 PF13531 Bacterial extracellular solute-binding protein AMD06_RS19865 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS19870 PF00005 ABC transporter AMD06_RS19880 PF03544 Gram-negative bacterial TonB protein C-terminal AMD06_RS19880 PF05569 BlaR1 peptidase M56 AMD06_RS19885 PF03965 Penicillinase repressor AMD06_RS19890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AMD06_RS19895 PF16670 AMD06_RS19895 AMD06_RS19900 PF00593 TonB dependent receptor AMD06_RS19900 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS19905 PF01471 Putative peptidoglycan binding domain AMD06_RS19905 PF03734 L,D-transpeptidase catalytic domain AMD06_RS19910 PF01551 Peptidase family M23 AMD06_RS19920 PF00593 TonB dependent receptor AMD06_RS19920 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS19940 PF00456 Transketolase, thiamine diphosphate binding domain AMD06_RS19940 PF02779 Transketolase, pyrimidine binding domain AMD06_RS19940 PF02780 Transketolase, C-terminal domain AMD06_RS19945 PF00375 Sodium:dicarboxylate symporter family AMD06_RS19950 PF13584 AMD06_RS19950 AMD06_RS19955 PF00515 Tetratricopeptide repeat AMD06_RS19955 PF13519 von Willebrand factor type A domain AMD06_RS19960 PF00092 von Willebrand factor type A domain AMD06_RS19965 PF14316 AMD06_RS19965 AMD06_RS19970 PF01882 AMD06_RS19970 AMD06_RS19975 PF07726 ATPase family associated with various cellular activities (AAA) AMD06_RS19980 PF00263 AMD06_RS19980 AMD06_RS19980 PF03958 Bacterial type II/III secretion system short domain AMD06_RS19980 PF07660 Secretin and TonB N terminus short domain AMD06_RS19985 PF04351 Pilus assembly protein, PilP AMD06_RS19990 PF04350 Pilus assembly protein, PilO AMD06_RS19995 PF05137 AMD06_RS19995 AMD06_RS20000 PF11104 Type IV pilus assembly protein PilM; AMD06_RS20005 PF00905 Penicillin binding protein transpeptidase domain AMD06_RS20005 PF00912 Transglycosylase AMD06_RS20005 PF17092 AMD06_RS20005 AMD06_RS20015 PF00285 Citrate synthase AMD06_RS20020 PF01197 Ribosomal protein L31 AMD06_RS20025 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD06_RS20030 PF00270 DEAD/DEAH box helicase AMD06_RS20030 PF00271 Helicase conserved C-terminal domain AMD06_RS20030 PF17191 AMD06_RS20030 AMD06_RS20035 PF01042 Endoribonuclease L-PSP AMD06_RS20040 PF02824 TGS domain AMD06_RS20040 PF04607 Region found in RelA / SpoT proteins AMD06_RS20040 PF13291 ACT domain AMD06_RS20040 PF13328 HD domain AMD06_RS20045 PF01192 RNA polymerase Rpb6 AMD06_RS20050 PF00625 Guanylate kinase AMD06_RS20055 PF03755 AMD06_RS20055 AMD06_RS20055 PF08340 AMD06_RS20055 AMD06_RS20060 PF01138 3' exoribonuclease family, domain 1 AMD06_RS20060 PF03725 3' exoribonuclease family, domain 2 AMD06_RS20065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS20070 PF01725 Ham1 family AMD06_RS20075 PF04055 Radical SAM superfamily AMD06_RS20075 PF06969 HemN C-terminal domain AMD06_RS20080 PF07793 AMD06_RS20080 AMD06_RS20085 PF07238 PilZ domain AMD06_RS20090 PF00557 Metallopeptidase family M24 AMD06_RS20100 PF00557 Metallopeptidase family M24 AMD06_RS20100 PF05195 Aminopeptidase P, N-terminal domain AMD06_RS20105 PF03695 Uncharacterised protein family (UPF0149) AMD06_RS20115 PF05164 Cell division protein ZapA AMD06_RS20120 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD06_RS20125 PF01878 EVE domain AMD06_RS20130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD06_RS20135 PF02643 Uncharacterized ACR, COG1430 AMD06_RS20140 PF13369 AMD06_RS20140 AMD06_RS20140 PF13371 Tetratricopeptide repeat AMD06_RS20145 PF00301 Rubredoxin AMD06_RS20150 PF02581 Thiamine monophosphate synthase/TENI AMD06_RS20155 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20165 PF00202 Aminotransferase class-III AMD06_RS20170 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS20170 PF13424 Tetratricopeptide repeat AMD06_RS20170 PF13481 AAA domain AMD06_RS20175 PF00127 Copper binding proteins, plastocyanin/azurin family AMD06_RS20180 PF00155 Aminotransferase class I and II AMD06_RS20185 PF01042 Endoribonuclease L-PSP AMD06_RS20190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD06_RS20195 PF01593 Flavin containing amine oxidoreductase AMD06_RS20200 PF00593 TonB dependent receptor AMD06_RS20200 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20210 PF00202 Aminotransferase class-III AMD06_RS20215 PF00520 Ion transport protein AMD06_RS20220 PF00106 short chain dehydrogenase AMD06_RS20230 PF01569 PAP2 superfamily AMD06_RS20230 PF09335 AMD06_RS20230 AMD06_RS20230 PF14067 AMD06_RS20230 AMD06_RS20235 PF01062 AMD06_RS20235 AMD06_RS20240 PF02190 ATP-dependent protease La (LON) domain AMD06_RS20245 PF01225 Mur ligase family, catalytic domain AMD06_RS20245 PF02875 Mur ligase family, glutamate ligase domain AMD06_RS20245 PF08245 Mur ligase middle domain AMD06_RS20250 PF00406 Adenylate kinase AMD06_RS20255 PF00365 Phosphofructokinase AMD06_RS20265 PF03030 Inorganic H+ pyrophosphatase AMD06_RS20275 PF00719 Inorganic pyrophosphatase AMD06_RS20280 PF08668 HDOD domain AMD06_RS20285 PF00593 TonB dependent receptor AMD06_RS20285 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20290 PF12833 Helix-turn-helix domain AMD06_RS20295 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS20295 PF07676 WD40-like Beta Propeller Repeat AMD06_RS20300 PF01964 ThiC family AMD06_RS20300 PF13667 ThiC-associated domain AMD06_RS20305 PF00593 TonB dependent receptor AMD06_RS20305 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS20315 PF01019 Gamma-glutamyltranspeptidase AMD06_RS20320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD06_RS20320 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMD06_RS20325 PF00205 Thiamine pyrophosphate enzyme, central domain AMD06_RS20325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD06_RS20325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD06_RS20330 PF13710 ACT domain AMD06_RS20335 PF00291 Pyridoxal-phosphate dependent enzyme AMD06_RS20340 PF00682 HMGL-like AMD06_RS20340 PF08502 LeuA allosteric (dimerisation) domain AMD06_RS20345 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD06_RS20350 PF00694 Aconitase C-terminal domain AMD06_RS20355 PF00330 Aconitase family (aconitate hydratase) AMD06_RS20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS20360 PF03466 LysR substrate binding domain AMD06_RS20365 PF00990 GGDEF domain AMD06_RS20365 PF07494 Two component regulator propeller AMD06_RS20365 PF07495 Y_Y_Y domain AMD06_RS20370 PF00440 Bacterial regulatory proteins, tetR family AMD06_RS20370 PF14246 AefR-like transcriptional repressor, C-terminal region AMD06_RS20375 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD06_RS20380 PF02321 Outer membrane efflux protein AMD06_RS20385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD06_RS20390 PF03279 AMD06_RS20390 AMD06_RS20395 PF04932 AMD06_RS20395 AMD06_RS20400 PF00534 Glycosyl transferases group 1 AMD06_RS20400 PF13439 Glycosyltransferase Family 4 AMD06_RS20405 PF10276 Zinc-finger domain AMD06_RS20415 PF00390 Malic enzyme, N-terminal domain AMD06_RS20415 PF01515 Phosphate acetyl/butaryl transferase AMD06_RS20415 PF03949 Malic enzyme, NAD binding domain AMD06_RS20420 PF00375 Sodium:dicarboxylate symporter family AMD06_RS20425 PF07396 Phosphate-selective porin O and P AMD06_RS20430 PF00072 Response regulator receiver domain AMD06_RS20430 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS20430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS20430 PF02743 Cache domain AMD06_RS20430 PF12860 AMD06_RS20430 AMD06_RS20435 PF00083 Sugar (and other) transporter AMD06_RS20440 PF13531 Bacterial extracellular solute-binding protein AMD06_RS20445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS20445 PF03466 LysR substrate binding domain AMD06_RS20450 PF00248 Aldo/keto reductase family AMD06_RS20455 PF12680 SnoaL-like domain AMD06_RS20460 PF11512 Agrobacterium tumefaciens protein Atu4866 AMD06_RS20465 PF00072 Response regulator receiver domain AMD06_RS20465 PF00196 Bacterial regulatory proteins, luxR family AMD06_RS20470 PF13531 Bacterial extracellular solute-binding protein AMD06_RS20475 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS20475 PF08521 AMD06_RS20475 AMD06_RS20480 PF00072 Response regulator receiver domain AMD06_RS20480 PF00486 Transcriptional regulatory protein, C terminal AMD06_RS20485 PF07396 Phosphate-selective porin O and P AMD06_RS20490 PF03600 Citrate transporter AMD06_RS20495 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS20500 PF00356 Bacterial regulatory proteins, lacI family AMD06_RS20500 PF13377 Periplasmic binding protein-like domain AMD06_RS20505 PF07690 Major Facilitator Superfamily AMD06_RS20510 PF00593 TonB dependent receptor AMD06_RS20510 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20515 PF00128 Alpha amylase, catalytic domain AMD06_RS20520 PF01965 DJ-1/PfpI family AMD06_RS20525 PF08014 AMD06_RS20525 AMD06_RS20530 PF03193 Protein of unknown function, DUF258 AMD06_RS20535 PF00155 Aminotransferase class I and II AMD06_RS20540 PF13472 GDSL-like Lipase/Acylhydrolase family AMD06_RS20545 PF08242 Methyltransferase domain AMD06_RS20550 PF00593 TonB dependent receptor AMD06_RS20550 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20555 PF01522 Polysaccharide deacetylase AMD06_RS20560 PF00462 Glutaredoxin AMD06_RS20560 PF00581 Rhodanese-like domain AMD06_RS20570 PF06041 Bacterial protein of unknown function (DUF924) AMD06_RS20575 PF01527 Transposase AMD06_RS20580 PF13683 AMD06_RS20580 AMD06_RS20585 PF09284 Rhamnogalacturonase B, N-terminal AMD06_RS20585 PF14683 Polysaccharide lyase family 4, domain III AMD06_RS20585 PF14686 Polysaccharide lyase family 4, domain II AMD06_RS20595 PF02645 Uncharacterised protein, DegV family COG1307 AMD06_RS20600 PF01327 Polypeptide deformylase AMD06_RS20605 PF03960 ArsC family AMD06_RS20615 PF02225 PA domain AMD06_RS20625 PF01270 Glycosyl hydrolases family 8 AMD06_RS20630 PF03170 Bacterial cellulose synthase subunit AMD06_RS20635 PF00535 Glycosyl transferase family 2 AMD06_RS20635 PF07238 PilZ domain AMD06_RS20650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD06_RS20670 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD06_RS20670 PF13641 Glycosyltransferase like family 2 AMD06_RS20680 PF00535 Glycosyl transferase family 2 AMD06_RS20690 PF01636 Phosphotransferase enzyme family AMD06_RS20695 PF00593 TonB dependent receptor AMD06_RS20695 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20700 PF04973 AMD06_RS20700 AMD06_RS20705 PF00392 Bacterial regulatory proteins, gntR family AMD06_RS20705 PF07702 UTRA domain AMD06_RS20715 PF00263 AMD06_RS20715 AMD06_RS20715 PF03958 Bacterial type II/III secretion system short domain AMD06_RS20725 PF10741 AMD06_RS20725 AMD06_RS20730 PF05137 AMD06_RS20730 AMD06_RS20735 PF03934 Type II secretion system (T2SS), protein K AMD06_RS20745 PF13544 AMD06_RS20745 AMD06_RS20750 PF12019 Type II transport protein GspH AMD06_RS20755 PF08334 Type II secretion system (T2SS), protein G AMD06_RS20760 PF00482 Type II secretion system (T2SS), protein F AMD06_RS20765 PF00437 Type II/IV secretion system protein AMD06_RS20765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD06_RS20770 PF00082 Subtilase family AMD06_RS20770 PF04151 Bacterial pre-peptidase C-terminal domain AMD06_RS20775 PF05658 Head domain of trimeric autotransporter adhesin AMD06_RS20775 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD06_RS20775 PF13018 AMD06_RS20775 AMD06_RS20780 PF00082 Subtilase family AMD06_RS20780 PF04151 Bacterial pre-peptidase C-terminal domain AMD06_RS20785 PF03895 YadA-like C-terminal region AMD06_RS20785 PF05658 Head domain of trimeric autotransporter adhesin AMD06_RS20785 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD06_RS20795 PF02769 AIR synthase related protein, C-terminal domain AMD06_RS20795 PF13507 CobB/CobQ-like glutamine amidotransferase domain AMD06_RS20800 PF10411 Disulfide bond isomerase protein N-terminus AMD06_RS20800 PF13098 Thioredoxin-like domain AMD06_RS20805 PF00589 Phage integrase family AMD06_RS20805 PF02899 Phage integrase, N-terminal SAM-like domain AMD06_RS20810 PF06271 AMD06_RS20810 AMD06_RS20820 PF03739 AMD06_RS20820 AMD06_RS20825 PF03739 AMD06_RS20825 AMD06_RS20830 PF00883 Cytosol aminopeptidase family, catalytic domain AMD06_RS20830 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD06_RS20840 PF04364 DNA polymerase III chi subunit, HolC AMD06_RS20845 PF00133 tRNA synthetases class I (I, L, M and V) AMD06_RS20845 PF08264 Anticodon-binding domain of tRNA AMD06_RS20845 PF10458 Valyl tRNA synthetase tRNA binding arm AMD06_RS20850 PF00593 TonB dependent receptor AMD06_RS20850 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS20855 PF01464 Transglycosylase SLT domain AMD06_RS20855 PF14718 Soluble lytic murein transglycosylase L domain AMD06_RS20860 PF00544 Pectate lyase AMD06_RS20865 PF00583 Acetyltransferase (GNAT) family AMD06_RS20875 PF01066 CDP-alcohol phosphatidyltransferase AMD06_RS20880 PF13511 AMD06_RS20880 AMD06_RS20885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD06_RS20885 PF03129 Anticodon binding domain AMD06_RS20885 PF04073 Aminoacyl-tRNA editing domain AMD06_RS20890 PF00816 H-NS histone family AMD06_RS20895 PF06738 AMD06_RS20895 AMD06_RS20895 PF12821 AMD06_RS20895 AMD06_RS20900 PF02405 AMD06_RS20900 AMD06_RS20905 PF00005 ABC transporter AMD06_RS20910 PF02470 AMD06_RS20910 AMD06_RS20915 PF03886 Protein of unknown function (DUF330) AMD06_RS20920 PF13532 2OG-Fe(II) oxygenase superfamily AMD06_RS20925 PF01946 Thi4 family AMD06_RS20925 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AMD06_RS20930 PF05045 AMD06_RS20930 AMD06_RS20930 PF14307 AMD06_RS20930 AMD06_RS20935 PF01144 Coenzyme A transferase AMD06_RS20940 PF01144 Coenzyme A transferase AMD06_RS20945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD06_RS20945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD06_RS20945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD06_RS20945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD06_RS20950 PF00483 Nucleotidyl transferase AMD06_RS20950 PF01050 Mannose-6-phosphate isomerase AMD06_RS20955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD06_RS20955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD06_RS20955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD06_RS20960 PF04321 RmlD substrate binding domain AMD06_RS20965 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD06_RS20970 PF00483 Nucleotidyl transferase AMD06_RS20975 PF16363 AMD06_RS20975 AMD06_RS20980 PF01012 Electron transfer flavoprotein domain AMD06_RS20985 PF00766 Electron transfer flavoprotein FAD-binding domain AMD06_RS20985 PF01012 Electron transfer flavoprotein domain AMD06_RS20990 PF03706 AMD06_RS20990 AMD06_RS20995 PF01040 UbiA prenyltransferase family AMD06_RS21000 PF01565 FAD binding domain AMD06_RS21005 PF00106 short chain dehydrogenase AMD06_RS21015 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS21020 PF01593 Flavin containing amine oxidoreductase AMD06_RS21025 PF04138 AMD06_RS21025 AMD06_RS21035 PF08241 Methyltransferase domain AMD06_RS21040 PF05045 AMD06_RS21040 AMD06_RS21045 PF14307 AMD06_RS21045 AMD06_RS21050 PF13578 Methyltransferase domain AMD06_RS21055 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS21060 PF00005 ABC transporter AMD06_RS21060 PF14524 Wzt C-terminal domain AMD06_RS21065 PF01061 AMD06_RS21065 AMD06_RS21070 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD06_RS21075 PF00291 Pyridoxal-phosphate dependent enzyme AMD06_RS21075 PF00571 CBS domain AMD06_RS21080 PF04325 Protein of unknown function (DUF465) AMD06_RS21090 PF14346 Domain of unknown function (DUF4398) AMD06_RS21095 PF00437 Type II/IV secretion system protein AMD06_RS21100 PF13410 Glutathione S-transferase, C-terminal domain AMD06_RS21100 PF13417 Glutathione S-transferase, N-terminal domain AMD06_RS21105 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD06_RS21110 PF00270 DEAD/DEAH box helicase AMD06_RS21110 PF00271 Helicase conserved C-terminal domain AMD06_RS21115 PF02225 PA domain AMD06_RS21115 PF04253 Transferrin receptor-like dimerisation domain AMD06_RS21115 PF04389 Peptidase family M28 AMD06_RS21120 PF00593 TonB dependent receptor AMD06_RS21120 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS21125 PF01242 6-pyruvoyl tetrahydropterin synthase AMD06_RS21130 PF09361 AMD06_RS21130 AMD06_RS21135 PF13500 AAA domain AMD06_RS21145 PF13185 GAF domain AMD06_RS21150 PF04994 TfoX C-terminal domain AMD06_RS21155 PF00756 Putative esterase AMD06_RS21160 PF00593 TonB dependent receptor AMD06_RS21160 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS21165 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS21170 PF00817 impB/mucB/samB family AMD06_RS21170 PF11799 impB/mucB/samB family C-terminal domain AMD06_RS21175 PF07977 FabA-like domain AMD06_RS21180 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD06_RS21180 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD06_RS21190 PF01432 Peptidase family M3 AMD06_RS21195 PF00291 Pyridoxal-phosphate dependent enzyme AMD06_RS21205 PF00394 Multicopper oxidase AMD06_RS21205 PF07731 Multicopper oxidase AMD06_RS21205 PF07732 Multicopper oxidase AMD06_RS21210 PF05275 AMD06_RS21210 AMD06_RS21215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD06_RS21225 PF01471 Putative peptidoglycan binding domain AMD06_RS21240 PF01380 SIS domain AMD06_RS21240 PF13522 Glutamine amidotransferase domain AMD06_RS21245 PF13437 HlyD family secretion protein AMD06_RS21245 PF13533 Biotin-lipoyl like AMD06_RS21250 PF00005 ABC transporter AMD06_RS21255 PF02687 AMD06_RS21255 AMD06_RS21255 PF12704 MacB-like periplasmic core domain AMD06_RS21260 PF02687 AMD06_RS21260 AMD06_RS21260 PF12704 MacB-like periplasmic core domain AMD06_RS21270 PF00072 Response regulator receiver domain AMD06_RS21270 PF00158 Sigma-54 interaction domain AMD06_RS21270 PF02954 Bacterial regulatory protein, Fis family AMD06_RS21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS21280 PF00132 Bacterial transferase hexapeptide (six repeats) AMD06_RS21280 PF12804 MobA-like NTP transferase domain AMD06_RS21280 PF14602 Hexapeptide repeat of succinyl-transferase AMD06_RS21285 PF04138 AMD06_RS21285 AMD06_RS21290 PF01817 Chorismate mutase type II AMD06_RS21295 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD06_RS21295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD06_RS21300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD06_RS21300 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD06_RS21305 PF00231 ATP synthase AMD06_RS21310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD06_RS21310 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD06_RS21310 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD06_RS21315 PF00213 ATP synthase delta (OSCP) subunit AMD06_RS21320 PF00430 ATP synthase B/B' CF(0) AMD06_RS21325 PF00137 ATP synthase subunit C AMD06_RS21330 PF00119 ATP synthase A chain AMD06_RS21350 PF00364 Biotin-requiring enzyme AMD06_RS21350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD06_RS21350 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS21360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD06_RS21360 PF00364 Biotin-requiring enzyme AMD06_RS21360 PF02817 e3 binding domain AMD06_RS21365 PF11101 AMD06_RS21365 AMD06_RS21370 PF03167 Uracil DNA glycosylase superfamily AMD06_RS21375 PF03922 OmpW family AMD06_RS21400 PF03180 NLPA lipoprotein AMD06_RS21405 PF00528 Binding-protein-dependent transport system inner membrane component AMD06_RS21410 PF00005 ABC transporter AMD06_RS21410 PF09383 NIL domain AMD06_RS21415 PF00892 EamA-like transporter family AMD06_RS21420 PF04461 Protein of unknown function (DUF520) AMD06_RS21430 PF00072 Response regulator receiver domain AMD06_RS21430 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS21435 PF12146 Putative lysophospholipase AMD06_RS21440 PF07209 AMD06_RS21440 AMD06_RS21450 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS21455 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS21460 PF00849 RNA pseudouridylate synthase AMD06_RS21465 PF05175 Methyltransferase small domain AMD06_RS21475 PF07995 Glucose / Sorbosone dehydrogenase AMD06_RS21480 PF11607 Protein of unknown function (DUF3247) AMD06_RS21485 PF00072 Response regulator receiver domain AMD06_RS21485 PF00512 His Kinase A (phospho-acceptor) domain AMD06_RS21485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS21485 PF08448 PAS fold AMD06_RS21485 PF13188 PAS domain AMD06_RS21500 PF11454 AMD06_RS21500 AMD06_RS21505 PF00842 Alanine racemase, C-terminal domain AMD06_RS21505 PF01168 Alanine racemase, N-terminal domain AMD06_RS21510 PF01266 FAD dependent oxidoreductase AMD06_RS21515 PF01037 AsnC family AMD06_RS21515 PF13404 AsnC-type helix-turn-helix domain AMD06_RS21525 PF01641 SelR domain AMD06_RS21530 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AMD06_RS21535 PF01618 AMD06_RS21535 AMD06_RS21540 PF00691 OmpA family AMD06_RS21540 PF13677 AMD06_RS21540 AMD06_RS21550 PF13223 AMD06_RS21550 AMD06_RS21560 PF11730 AMD06_RS21560 AMD06_RS21565 PF01061 AMD06_RS21565 AMD06_RS21570 PF00005 ABC transporter AMD06_RS21575 PF00999 Sodium/hydrogen exchanger family AMD06_RS21580 PF02469 Fasciclin domain AMD06_RS21585 PF03167 Uracil DNA glycosylase superfamily AMD06_RS21585 PF13566 AMD06_RS21585 AMD06_RS21590 PF04055 Radical SAM superfamily AMD06_RS21595 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD06_RS21600 PF07681 AMD06_RS21600 AMD06_RS21605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS21605 PF03466 LysR substrate binding domain AMD06_RS21610 PF03358 NADPH-dependent FMN reductase AMD06_RS21615 PF00248 Aldo/keto reductase family AMD06_RS21620 PF00535 Glycosyl transferase family 2 AMD06_RS21625 PF01431 Peptidase family M13 AMD06_RS21625 PF05649 Peptidase family M13 AMD06_RS21630 PF09995 AMD06_RS21630 AMD06_RS21645 PF13520 Amino acid permease AMD06_RS21655 PF00072 Response regulator receiver domain AMD06_RS21655 PF04397 LytTr DNA-binding domain AMD06_RS21660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD06_RS21660 PF06580 AMD06_RS21660 AMD06_RS21665 PF01266 FAD dependent oxidoreductase AMD06_RS21675 PF05974 Domain of unknown function (DUF892) AMD06_RS21680 PF05067 Manganese containing catalase AMD06_RS21700 PF01339 CheB methylesterase AMD06_RS21700 PF01739 CheR methyltransferase, SAM binding domain AMD06_RS21700 PF03705 CheR methyltransferase, all-alpha domain AMD06_RS21700 PF07536 AMD06_RS21700 AMD06_RS21700 PF08447 PAS fold AMD06_RS21700 PF13596 PAS domain AMD06_RS21705 PF00072 Response regulator receiver domain AMD06_RS21715 PF00072 Response regulator receiver domain AMD06_RS21715 PF00158 Sigma-54 interaction domain AMD06_RS21715 PF02954 Bacterial regulatory protein, Fis family AMD06_RS21725 PF01654 AMD06_RS21725 AMD06_RS21730 PF02322 AMD06_RS21730 AMD06_RS21745 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS21750 PF01370 NAD dependent epimerase/dehydratase family AMD06_RS21755 PF13692 Glycosyl transferases group 1 AMD06_RS21760 PF03275 UDP-galactopyranose mutase AMD06_RS21760 PF13450 NAD(P)-binding Rossmann-like domain AMD06_RS21770 PF00005 ABC transporter AMD06_RS21770 PF00664 ABC transporter transmembrane region AMD06_RS21775 PF12244 AMD06_RS21775 AMD06_RS21780 PF13628 AMD06_RS21780 AMD06_RS21785 PF00107 Zinc-binding dehydrogenase AMD06_RS21785 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS21785 PF13823 Alcohol dehydrogenase GroES-associated AMD06_RS21795 PF03692 AMD06_RS21795 AMD06_RS21810 PF11828 AMD06_RS21810 AMD06_RS21815 PF05650 AMD06_RS21815 AMD06_RS21820 PF00691 OmpA family AMD06_RS21825 PF11445 AMD06_RS21825 AMD06_RS21830 PF00593 TonB dependent receptor AMD06_RS21830 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS21835 PF12040 AMD06_RS21835 AMD06_RS21840 PF12040 AMD06_RS21840 AMD06_RS21840 PF12679 AMD06_RS21840 AMD06_RS21845 PF00005 ABC transporter AMD06_RS21850 PF00246 Zinc carboxypeptidase AMD06_RS21855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS21855 PF03466 LysR substrate binding domain AMD06_RS21860 PF01042 Endoribonuclease L-PSP AMD06_RS21870 PF12849 PBP superfamily domain AMD06_RS21875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD06_RS21875 PF00672 HAMP domain AMD06_RS21880 PF01223 DNA/RNA non-specific endonuclease AMD06_RS21885 PF12697 Alpha/beta hydrolase family AMD06_RS21895 PF02525 Flavodoxin-like fold AMD06_RS21900 PF03795 YCII-related domain AMD06_RS21910 PF07866 Protein of unknown function (DUF1653) AMD06_RS21935 PF00557 Metallopeptidase family M24 AMD06_RS21940 PF11903 AMD06_RS21940 AMD06_RS21945 PF01695 IstB-like ATP binding protein AMD06_RS21950 PF00665 Integrase core domain AMD06_RS21950 PF13936 Helix-turn-helix domain AMD06_RS21955 PF01527 Transposase AMD06_RS21960 PF00665 Integrase core domain AMD06_RS21960 PF13276 AMD06_RS21960 AMD06_RS21970 PF00717 Peptidase S24-like AMD06_RS21975 PF00817 impB/mucB/samB family AMD06_RS21975 PF11799 impB/mucB/samB family C-terminal domain AMD06_RS21975 PF13438 AMD06_RS21975 AMD06_RS21980 PF07791 AMD06_RS21980 AMD06_RS21995 PF01555 DNA methylase AMD06_RS22005 PF04860 Phage portal protein AMD06_RS22010 PF03237 Terminase-like family AMD06_RS22010 PF06056 Putative ATPase subunit of terminase (gpP-like) AMD06_RS22015 PF05929 AMD06_RS22015 AMD06_RS22020 PF05125 AMD06_RS22020 AMD06_RS22025 PF05944 AMD06_RS22025 AMD06_RS22030 PF05926 AMD06_RS22030 AMD06_RS22035 PF05489 Phage Tail Protein X AMD06_RS22040 PF16931 AMD06_RS22040 AMD06_RS22045 PF05449 AMD06_RS22045 AMD06_RS22060 PF06891 AMD06_RS22060 AMD06_RS22065 PF05069 AMD06_RS22065 AMD06_RS22070 PF04865 AMD06_RS22070 AMD06_RS22075 PF09684 AMD06_RS22075 AMD06_RS22095 PF04717 Phage-related baseplate assembly protein AMD06_RS22100 PF04965 Gene 25-like lysozyme AMD06_RS22105 PF04984 Phage tail sheath protein AMD06_RS22110 PF04985 AMD06_RS22110 AMD06_RS22115 PF10109 AMD06_RS22115 AMD06_RS22125 PF06995 AMD06_RS22125 AMD06_RS22130 PF05954 Phage late control gene D protein (GPD) AMD06_RS22140 PF04606 AMD06_RS22140 AMD06_RS22155 PF13155 Toprim-like AMD06_RS22160 PF01695 IstB-like ATP binding protein AMD06_RS22165 PF00665 Integrase core domain AMD06_RS22165 PF13936 Helix-turn-helix domain AMD06_RS22230 PF00140 Sigma-70 factor, region 1 AMD06_RS22230 PF03979 Sigma-70 factor, region 1 AMD06_RS22230 PF04539 Sigma-70 region 3 AMD06_RS22230 PF04542 Sigma-70 region 2 AMD06_RS22230 PF04545 Sigma-70, region 4 AMD06_RS22230 PF04546 Sigma-70, non-essential region AMD06_RS22235 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD06_RS22240 PF03279 AMD06_RS22240 AMD06_RS22245 PF13420 Acetyltransferase (GNAT) domain AMD06_RS22255 PF00925 GTP cyclohydrolase II AMD06_RS22260 PF03703 AMD06_RS22260 AMD06_RS22265 PF03703 AMD06_RS22265 AMD06_RS22270 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD06_RS22275 PF00535 Glycosyl transferase family 2 AMD06_RS22280 PF04932 AMD06_RS22280 AMD06_RS22285 PF13231 AMD06_RS22285 AMD06_RS22290 PF01029 NusB family AMD06_RS22290 PF01189 NOL1/NOP2/sun family AMD06_RS22295 PF00551 Formyl transferase AMD06_RS22295 PF02911 Formyl transferase, C-terminal domain AMD06_RS22300 PF01327 Polypeptide deformylase AMD06_RS22305 PF01476 LysM domain AMD06_RS22310 PF02481 DNA recombination-mediator protein A AMD06_RS22315 PF04361 AMD06_RS22315 AMD06_RS22320 PF00114 Pilin (bacterial filament) AMD06_RS22320 PF14237 AMD06_RS22320 AMD06_RS22325 PF06271 AMD06_RS22325 AMD06_RS22325 PF14237 AMD06_RS22325 AMD06_RS22330 PF01131 DNA topoisomerase AMD06_RS22330 PF01751 Toprim domain AMD06_RS22330 PF13368 AMD06_RS22330 AMD06_RS22335 PF01300 Telomere recombination AMD06_RS22350 PF13561 Enoyl-(Acyl carrier protein) reductase AMD06_RS22360 PF01343 Peptidase family S49 AMD06_RS22365 PF01554 MatE AMD06_RS22370 PF12412 AMD06_RS22370 AMD06_RS22375 PF11304 AMD06_RS22375 AMD06_RS22385 PF00270 DEAD/DEAH box helicase AMD06_RS22385 PF00271 Helicase conserved C-terminal domain AMD06_RS22390 PF13410 Glutathione S-transferase, C-terminal domain AMD06_RS22390 PF13417 Glutathione S-transferase, N-terminal domain AMD06_RS22395 PF01936 NYN domain AMD06_RS22395 PF12872 OST-HTH/LOTUS domain AMD06_RS22405 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD06_RS22410 PF03458 AMD06_RS22410 AMD06_RS22415 PF00140 Sigma-70 factor, region 1 AMD06_RS22415 PF04542 Sigma-70 region 2 AMD06_RS22415 PF04545 Sigma-70, region 4 AMD06_RS22420 PF03167 Uracil DNA glycosylase superfamily AMD06_RS22425 PF00072 Response regulator receiver domain AMD06_RS22430 PF02687 AMD06_RS22430 AMD06_RS22435 PF00005 ABC transporter AMD06_RS22440 PF00270 DEAD/DEAH box helicase AMD06_RS22440 PF00271 Helicase conserved C-terminal domain AMD06_RS22440 PF12300 AMD06_RS22440 AMD06_RS22445 PF00085 Thioredoxin AMD06_RS22450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD06_RS22450 PF07497 Rho termination factor, RNA-binding domain AMD06_RS22450 PF07498 Rho termination factor, N-terminal domain AMD06_RS22455 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD06_RS22460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS22460 PF03466 LysR substrate binding domain AMD06_RS22470 PF03971 Monomeric isocitrate dehydrogenase AMD06_RS22480 PF00270 DEAD/DEAH box helicase AMD06_RS22490 PF09709 AMD06_RS22490 AMD06_RS22495 PF05107 AMD06_RS22495 AMD06_RS22500 PF01930 Domain of unknown function DUF83 AMD06_RS22505 PF01867 CRISPR associated protein Cas1 AMD06_RS22515 PF00665 Integrase core domain AMD06_RS22515 PF13936 Helix-turn-helix domain AMD06_RS22520 PF01695 IstB-like ATP binding protein AMD06_RS22530 PF01476 LysM domain AMD06_RS22535 PF14489 QueF-like protein AMD06_RS22535 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD06_RS22540 PF01546 Peptidase family M20/M25/M40 AMD06_RS22540 PF07687 Peptidase dimerisation domain AMD06_RS22545 PF16576 AMD06_RS22545 AMD06_RS22550 PF00873 AcrB/AcrD/AcrF family AMD06_RS22555 PF00873 AcrB/AcrD/AcrF family AMD06_RS22560 PF07063 Domain of unknown function (DUF1338) AMD06_RS22575 PF13419 Haloacid dehalogenase-like hydrolase AMD06_RS22580 PF13202 EF hand AMD06_RS22585 PF13202 EF hand AMD06_RS22595 PF14255 AMD06_RS22595 AMD06_RS22600 PF01427 D-ala-D-ala dipeptidase AMD06_RS22605 PF01510 N-acetylmuramoyl-L-alanine amidase AMD06_RS22610 PF00877 NlpC/P60 family AMD06_RS22610 PF12913 SH3 domain of the SH3b1 type AMD06_RS22610 PF12914 SH3 domain of SH3b2 type AMD06_RS22615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD06_RS22615 PF13378 Enolase C-terminal domain-like AMD06_RS22625 PF13520 Amino acid permease AMD06_RS22640 PF05360 AMD06_RS22640 AMD06_RS22645 PF07995 Glucose / Sorbosone dehydrogenase AMD06_RS22650 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD06_RS22650 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD06_RS22650 PF14310 Fibronectin type III-like domain AMD06_RS22655 PF02152 Dihydroneopterin aldolase AMD06_RS22660 PF00814 Glycoprotease family AMD06_RS22665 PF01165 Ribosomal protein S21 AMD06_RS22670 PF09424 Yqey-like protein AMD06_RS22675 PF03631 AMD06_RS22675 AMD06_RS22680 PF01807 CHC2 zinc finger AMD06_RS22680 PF08275 DNA primase catalytic core, N-terminal domain AMD06_RS22680 PF08278 DNA primase DnaG DnaB-binding AMD06_RS22680 PF10410 DnaB-helicase binding domain of primase AMD06_RS22680 PF13155 Toprim-like AMD06_RS22685 PF13593 SBF-like CPA transporter family (DUF4137) AMD06_RS22690 PF13899 Thioredoxin-like AMD06_RS22695 PF01040 UbiA prenyltransferase family AMD06_RS22700 PF02628 AMD06_RS22700 AMD06_RS22710 PF02104 AMD06_RS22710 AMD06_RS22715 PF11137 AMD06_RS22715 AMD06_RS22720 PF00510 Cytochrome c oxidase subunit III AMD06_RS22725 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD06_RS22730 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD06_RS22735 PF10003 AMD06_RS22735 AMD06_RS22740 PF00171 Aldehyde dehydrogenase family AMD06_RS22740 PF01619 Proline dehydrogenase AMD06_RS22740 PF14850 DNA-binding domain of Proline dehydrogenase AMD06_RS22780 PF03594 AMD06_RS22780 AMD06_RS22785 PF00360 Phytochrome region AMD06_RS22785 PF01590 GAF domain AMD06_RS22785 PF08446 PAS fold AMD06_RS22785 PF08448 PAS fold AMD06_RS22790 PF01126 Heme oxygenase AMD06_RS22795 PF07690 Major Facilitator Superfamily AMD06_RS22800 PF01263 Aldose 1-epimerase AMD06_RS22800 PF01471 Putative peptidoglycan binding domain AMD06_RS22800 PF13406 Transglycosylase SLT domain AMD06_RS22815 PF01925 AMD06_RS22815 AMD06_RS22820 PF13555 P-loop containing region of AAA domain AMD06_RS22820 PF13558 Putative exonuclease SbcCD, C subunit AMD06_RS22825 PF13835 AMD06_RS22825 AMD06_RS22830 PF11855 AMD06_RS22830 AMD06_RS22835 PF01227 GTP cyclohydrolase I AMD06_RS22840 PF12802 MarR family AMD06_RS22845 PF07869 AMD06_RS22845 AMD06_RS22850 PF13437 HlyD family secretion protein AMD06_RS22850 PF13533 Biotin-lipoyl like AMD06_RS22855 PF02321 Outer membrane efflux protein AMD06_RS22860 PF04632 AMD06_RS22860 AMD06_RS22865 PF00083 Sugar (and other) transporter AMD06_RS22870 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD06_RS22875 PF13091 PLD-like domain AMD06_RS22890 PF05016 Plasmid stabilisation system protein AMD06_RS22895 PF03869 Arc-like DNA binding domain AMD06_RS22900 PF01850 PIN domain AMD06_RS22905 PF00756 Putative esterase AMD06_RS22910 PF09722 AMD06_RS22910 AMD06_RS22925 PF00849 RNA pseudouridylate synthase AMD06_RS22935 PF01527 Transposase AMD06_RS22945 PF13333 AMD06_RS22945 AMD06_RS22950 PF07080 Protein of unknown function (DUF1348) AMD06_RS22955 PF01609 Transposase DDE domain AMD06_RS22960 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD06_RS22960 PF00364 Biotin-requiring enzyme AMD06_RS22960 PF02626 Allophanate hydrolase subunit 2 AMD06_RS22960 PF02682 Allophanate hydrolase subunit 1 AMD06_RS22960 PF02785 Biotin carboxylase C-terminal domain AMD06_RS22960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD06_RS22965 PF01425 Amidase AMD06_RS22970 PF01609 Transposase DDE domain AMD06_RS22975 PF07080 Protein of unknown function (DUF1348) AMD06_RS22985 PF05299 M61 glycyl aminopeptidase AMD06_RS22990 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD06_RS22995 PF13538 UvrD-like helicase C-terminal domain AMD06_RS22995 PF13604 AAA domain AMD06_RS23000 PF00580 UvrD/REP helicase N-terminal domain AMD06_RS23000 PF12705 PD-(D/E)XK nuclease superfamily AMD06_RS23000 PF13361 UvrD-like helicase C-terminal domain AMD06_RS23005 PF04257 Exodeoxyribonuclease V, gamma subunit AMD06_RS23020 PF00005 ABC transporter AMD06_RS23025 PF02405 AMD06_RS23025 AMD06_RS23030 PF02470 AMD06_RS23030 AMD06_RS23035 PF05494 Toluene tolerance, Ttg2 AMD06_RS23040 PF13466 STAS domain AMD06_RS23045 PF04333 AMD06_RS23045 AMD06_RS23050 PF14534 Domain of unknown function (DUF4440) AMD06_RS23055 PF00255 Glutathione peroxidase AMD06_RS23065 PF02646 AMD06_RS23065 AMD06_RS23070 PF08240 Alcohol dehydrogenase GroES-like domain AMD06_RS23070 PF13602 Zinc-binding dehydrogenase AMD06_RS23075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD06_RS23075 PF03466 LysR substrate binding domain AMD06_RS23085 PF13410 Glutathione S-transferase, C-terminal domain AMD06_RS23085 PF13417 Glutathione S-transferase, N-terminal domain AMD06_RS23095 PF13520 Amino acid permease AMD06_RS23100 PF07971 Glycosyl hydrolase family 92 AMD06_RS23105 PF10947 AMD06_RS23105 AMD06_RS23110 PF00990 GGDEF domain AMD06_RS23110 PF08448 PAS fold AMD06_RS23115 PF05651 AMD06_RS23115 AMD06_RS23115 PF13556 PucR C-terminal helix-turn-helix domain AMD06_RS23120 PF02595 Glycerate kinase family AMD06_RS23125 PF07690 Major Facilitator Superfamily AMD06_RS23130 PF01244 Membrane dipeptidase (Peptidase family M19) AMD06_RS23140 PF10672 S-adenosylmethionine-dependent methyltransferase AMD06_RS23145 PF03741 AMD06_RS23145 AMD06_RS23150 PF01694 Rhomboid family AMD06_RS23155 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD06_RS23160 PF00593 TonB dependent receptor AMD06_RS23160 PF07715 TonB-dependent Receptor Plug Domain AMD06_RS23165 PF01569 PAP2 superfamily AMD06_RS23170 PF01926 50S ribosome-binding GTPase AMD06_RS23170 PF10396 GTP-binding protein TrmE N-terminus AMD06_RS23170 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AMD06_RS23175 PF00656 Caspase domain AMD06_RS23175 PF01522 Polysaccharide deacetylase AMD06_RS23175 PF13432 Tetratricopeptide repeat AMD06_RS23185 PF02096 60Kd inner membrane protein AMD06_RS23185 PF14849 YidC periplasmic domain AMD06_RS23190 PF00825 Ribonuclease P AMD06_RS23195 PF00468 Ribosomal protein L34