locus-tag class description AMD23_RS00260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD23_RS00315 PF00150 Cellulase (glycosyl hydrolase family 5) AMD23_RS00360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD23_RS00360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS00375 PF01645 Conserved region in glutamate synthase AMD23_RS00375 PF01493 GXGXG motif AMD23_RS00375 PF04898 Glutamate synthase central domain AMD23_RS00375 PF00310 Glutamine amidotransferases class-II AMD23_RS00385 PF00310 Glutamine amidotransferases class-II AMD23_RS00385 PF04898 Glutamate synthase central domain AMD23_RS00385 PF01493 GXGXG motif AMD23_RS00385 PF01645 Conserved region in glutamate synthase AMD23_RS00480 PF13537 Glutamine amidotransferase domain AMD23_RS00480 PF00733 Asparagine synthase AMD23_RS00500 PF08299 Bacterial dnaA protein helix-turn-helix AMD23_RS00500 PF11638 DnaA N-terminal domain AMD23_RS00500 PF00308 Bacterial dnaA protein AMD23_RS00505 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD23_RS00505 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD23_RS00505 PF02767 DNA polymerase III beta subunit, central domain AMD23_RS00510 PF02463 RecF/RecN/SMC N terminal domain AMD23_RS00515 PF00986 DNA gyrase B subunit, carboxyl terminus AMD23_RS00515 PF01751 Toprim domain AMD23_RS00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS00515 PF18053 DNA gyrase B subunit insert domain AMD23_RS00515 PF00204 DNA gyrase B AMD23_RS00525 PF01435 Peptidase family M48 AMD23_RS00535 PF03544 Gram-negative bacterial TonB protein C-terminal AMD23_RS00540 PF01618 MotA/TolQ/ExbB proton channel family AMD23_RS00545 PF02472 Biopolymer transport protein ExbD/TolR AMD23_RS00550 PF02472 Biopolymer transport protein ExbD/TolR AMD23_RS00555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD23_RS00565 PF13091 PLD-like domain AMD23_RS00565 PF13396 Phospholipase_D-nuclease N-terminal AMD23_RS00580 PF04055 Radical SAM superfamily AMD23_RS00590 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD23_RS00605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD23_RS00605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD23_RS00610 PF03572 Peptidase family S41 AMD23_RS00610 PF13180 PDZ domain AMD23_RS00615 PF01551 Peptidase family M23 AMD23_RS00625 PF04389 Peptidase family M28 AMD23_RS00635 PF00150 Cellulase (glycosyl hydrolase family 5) AMD23_RS00640 PF00150 Cellulase (glycosyl hydrolase family 5) AMD23_RS00645 PF00150 Cellulase (glycosyl hydrolase family 5) AMD23_RS00650 PF00107 Zinc-binding dehydrogenase AMD23_RS00650 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS00655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD23_RS00660 PF01645 Conserved region in glutamate synthase AMD23_RS00660 PF04898 Glutamate synthase central domain AMD23_RS00660 PF00310 Glutamine amidotransferases class-II AMD23_RS00660 PF01493 GXGXG motif AMD23_RS00690 PF03466 LysR substrate binding domain AMD23_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS00705 PF02397 Bacterial sugar transferase AMD23_RS00710 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD23_RS00720 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD23_RS00725 PF00534 Glycosyl transferases group 1 AMD23_RS00725 PF13439 Glycosyltransferase Family 4 AMD23_RS00745 PF13537 Glutamine amidotransferase domain AMD23_RS00745 PF00733 Asparagine synthase AMD23_RS00760 PF16363 GDP-mannose 4,6 dehydratase AMD23_RS00775 PF00005 ABC transporter AMD23_RS00775 PF00664 ABC transporter transmembrane region AMD23_RS00790 PF00733 Asparagine synthase AMD23_RS00790 PF13537 Glutamine amidotransferase domain AMD23_RS00805 PF07475 HPr Serine kinase C-terminal domain AMD23_RS00805 PF02603 HPr Serine kinase N terminus AMD23_RS00810 PF00685 Sulfotransferase domain AMD23_RS00885 PF00271 Helicase conserved C-terminal domain AMD23_RS00885 PF09369 Domain of unknown function (DUF1998) AMD23_RS00885 PF00270 DEAD/DEAH box helicase AMD23_RS00890 PF03006 Haemolysin-III related AMD23_RS00905 PF00106 short chain dehydrogenase AMD23_RS00915 PF03466 LysR substrate binding domain AMD23_RS00915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS00930 PF02525 Flavodoxin-like fold AMD23_RS00990 PF05532 CsbD-like AMD23_RS01010 PF16485 Protealysin propeptide AMD23_RS01010 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD23_RS01010 PF01447 Thermolysin metallopeptidase, catalytic domain AMD23_RS01020 PF13344 Haloacid dehalogenase-like hydrolase AMD23_RS01020 PF00293 NUDIX domain AMD23_RS01040 PF00085 Thioredoxin AMD23_RS01050 PF00083 Sugar (and other) transporter AMD23_RS01050 PF08946 Osmosensory transporter coiled coil AMD23_RS01090 PF07726 ATPase family associated with various cellular activities (AAA) AMD23_RS01090 PF17863 AAA lid domain AMD23_RS01120 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMD23_RS01125 PF00155 Aminotransferase class I and II AMD23_RS01130 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS01130 PF00593 TonB dependent receptor AMD23_RS01140 PF07883 Cupin domain AMD23_RS01145 PF00171 Aldehyde dehydrogenase family AMD23_RS01165 PF02735 Ku70/Ku80 beta-barrel domain AMD23_RS01170 PF01070 FMN-dependent dehydrogenase AMD23_RS01175 PF00144 Beta-lactamase AMD23_RS01180 PF07730 Histidine kinase AMD23_RS01185 PF00072 Response regulator receiver domain AMD23_RS01185 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS01205 PF18500 CadC C-terminal domain 1 AMD23_RS01205 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS01210 PF07055 Enoyl reductase FAD binding domain AMD23_RS01210 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD23_RS01210 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD23_RS01220 PF00294 pfkB family carbohydrate kinase AMD23_RS01280 PF13333 Integrase core domain AMD23_RS01280 PF00665 Integrase core domain AMD23_RS01280 PF13276 HTH-like domain AMD23_RS01285 PF11896 Domain of unknown function (DUF3416) AMD23_RS01285 PF00128 Alpha amylase, catalytic domain AMD23_RS01290 PF00128 Alpha amylase, catalytic domain AMD23_RS01290 PF16657 Maltogenic Amylase, C-terminal domain AMD23_RS01295 PF02806 Alpha amylase, C-terminal all-beta domain AMD23_RS01295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD23_RS01295 PF00128 Alpha amylase, catalytic domain AMD23_RS01305 PF00248 Aldo/keto reductase family AMD23_RS01310 PF00135 Carboxylesterase family AMD23_RS01315 PF07859 alpha/beta hydrolase fold AMD23_RS01315 PF13472 GDSL-like Lipase/Acylhydrolase family AMD23_RS01325 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD23_RS01335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMD23_RS01340 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD23_RS01340 PF04616 Glycosyl hydrolases family 43 AMD23_RS01345 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS01350 PF04962 KduI/IolB family AMD23_RS01365 PF00657 GDSL-like Lipase/Acylhydrolase AMD23_RS01380 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD23_RS01385 PF01037 Lrp/AsnC ligand binding domain AMD23_RS01390 PF07660 Secretin and TonB N terminus short domain AMD23_RS01390 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS01390 PF00593 TonB dependent receptor AMD23_RS01395 PF01734 Patatin-like phospholipase AMD23_RS01405 PF00005 ABC transporter AMD23_RS01420 PF00005 ABC transporter AMD23_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS01435 PF12867 DinB superfamily AMD23_RS01435 PF03781 Sulfatase-modifying factor enzyme 1 AMD23_RS01455 PF01381 Helix-turn-helix AMD23_RS01480 PF01883 Iron-sulfur cluster assembly protein AMD23_RS01480 PF10609 NUBPL iron-transfer P-loop NTPase AMD23_RS01495 PF13091 PLD-like domain AMD23_RS01500 PF03061 Thioesterase superfamily AMD23_RS01530 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS01530 PF00107 Zinc-binding dehydrogenase AMD23_RS01540 PF02673 Bacitracin resistance protein BacA AMD23_RS01545 PF00120 Glutamine synthetase, catalytic domain AMD23_RS01545 PF03951 Glutamine synthetase, beta-Grasp domain AMD23_RS01550 PF00543 Nitrogen regulatory protein P-II AMD23_RS01555 PF00909 Ammonium Transporter Family AMD23_RS01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS01560 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS01560 PF00989 PAS fold AMD23_RS01565 PF00158 Sigma-54 interaction domain AMD23_RS01565 PF02954 Bacterial regulatory protein, Fis family AMD23_RS01565 PF00072 Response regulator receiver domain AMD23_RS01570 PF00080 Copper/zinc superoxide dismutase (SODC) AMD23_RS01575 PF00080 Copper/zinc superoxide dismutase (SODC) AMD23_RS01580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD23_RS01590 PF00108 Thiolase, N-terminal domain AMD23_RS01590 PF02803 Thiolase, C-terminal domain AMD23_RS01625 PF00581 Rhodanese-like domain AMD23_RS01630 PF02556 Preprotein translocase subunit SecB AMD23_RS01635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD23_RS01635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD23_RS01645 PF00205 Thiamine pyrophosphate enzyme, central domain AMD23_RS01645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD23_RS01645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD23_RS01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS01655 PF02954 Bacterial regulatory protein, Fis family AMD23_RS01655 PF00072 Response regulator receiver domain AMD23_RS01655 PF00158 Sigma-54 interaction domain AMD23_RS01670 PF07690 Major Facilitator Superfamily AMD23_RS01675 PF00588 SpoU rRNA Methylase family AMD23_RS01690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD23_RS01690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD23_RS01695 PF13784 Fic/DOC family N-terminal AMD23_RS01695 PF02661 Fic/DOC family AMD23_RS01700 PF00561 alpha/beta hydrolase fold AMD23_RS01705 PF03692 Putative zinc- or iron-chelating domain AMD23_RS01710 PF00501 AMP-binding enzyme AMD23_RS01715 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD23_RS01730 PF01820 D-ala D-ala ligase N-terminus AMD23_RS01730 PF07478 D-ala D-ala ligase C-terminus AMD23_RS01740 PF03109 ABC1 family AMD23_RS01750 PF00849 RNA pseudouridylate synthase AMD23_RS01760 PF00472 RF-1 domain AMD23_RS01770 PF01112 Asparaginase AMD23_RS01775 PF01432 Peptidase family M3 AMD23_RS01780 PF12706 Beta-lactamase superfamily domain AMD23_RS01800 PF12833 Helix-turn-helix domain AMD23_RS01805 PF00999 Sodium/hydrogen exchanger family AMD23_RS01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS01810 PF03466 LysR substrate binding domain AMD23_RS01815 PF01274 Malate synthase AMD23_RS01820 PF00463 Isocitrate lyase family AMD23_RS01825 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS01845 PF00326 Prolyl oligopeptidase family AMD23_RS01850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD23_RS01850 PF00364 Biotin-requiring enzyme AMD23_RS01850 PF00289 Biotin carboxylase, N-terminal domain AMD23_RS01850 PF02785 Biotin carboxylase C-terminal domain AMD23_RS01850 PF18140 Propionyl-coenzyme A carboxylase BT domain AMD23_RS01855 PF01039 Carboxyl transferase domain AMD23_RS01860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD23_RS01860 PF02770 Acyl-CoA dehydrogenase, middle domain AMD23_RS01860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD23_RS01915 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD23_RS01915 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD23_RS01940 PF03969 AFG1-like ATPase AMD23_RS01945 PF01047 MarR family AMD23_RS01950 PF02566 OsmC-like protein AMD23_RS01980 PF00107 Zinc-binding dehydrogenase AMD23_RS01980 PF16884 N-terminal domain of oxidoreductase AMD23_RS01985 PF00248 Aldo/keto reductase family AMD23_RS01995 PF00849 RNA pseudouridylate synthase AMD23_RS02000 PF00593 TonB dependent receptor AMD23_RS02010 PF08482 ATP-dependent helicase C-terminal AMD23_RS02010 PF04408 Helicase associated domain (HA2) AMD23_RS02010 PF00270 DEAD/DEAH box helicase AMD23_RS02010 PF00271 Helicase conserved C-terminal domain AMD23_RS02020 PF07308 Protein of unknown function (DUF1456) AMD23_RS02025 PF00576 HIUase/Transthyretin family AMD23_RS02030 PF13454 FAD-NAD(P)-binding AMD23_RS02035 PF09349 OHCU decarboxylase AMD23_RS02035 PF01014 Uricase AMD23_RS02050 PF00266 Aminotransferase class-V AMD23_RS02055 PF01546 Peptidase family M20/M25/M40 AMD23_RS02055 PF07687 Peptidase dimerisation domain AMD23_RS02060 PF03466 LysR substrate binding domain AMD23_RS02060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS02065 PF07690 Major Facilitator Superfamily AMD23_RS02080 PF01425 Amidase AMD23_RS02085 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD23_RS02095 PF00860 Permease family AMD23_RS02105 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD23_RS02110 PF00355 Rieske [2Fe-2S] domain AMD23_RS02115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS02115 PF03466 LysR substrate binding domain AMD23_RS02120 PF01026 TatD related DNase AMD23_RS02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS02135 PF03466 LysR substrate binding domain AMD23_RS02140 PF07690 Major Facilitator Superfamily AMD23_RS02155 PF02146 Sir2 family AMD23_RS02160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD23_RS02165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD23_RS02165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD23_RS02175 PF00551 Formyl transferase AMD23_RS02180 PF00072 Response regulator receiver domain AMD23_RS02180 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS02185 PF00672 HAMP domain AMD23_RS02185 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS02190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS02190 PF00529 HlyD membrane-fusion protein of T1SS AMD23_RS02195 PF00873 AcrB/AcrD/AcrF family AMD23_RS02200 PF02321 Outer membrane efflux protein AMD23_RS02210 PF02219 Methylenetetrahydrofolate reductase AMD23_RS02215 PF02677 Epoxyqueuosine reductase QueH AMD23_RS02220 PF03466 LysR substrate binding domain AMD23_RS02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS02225 PF03358 NADPH-dependent FMN reductase AMD23_RS02235 PF01717 Cobalamin-independent synthase, Catalytic domain AMD23_RS02235 PF08267 Cobalamin-independent synthase, N-terminal domain AMD23_RS02240 PF03812 2-keto-3-deoxygluconate permease AMD23_RS02250 PF05368 NmrA-like family AMD23_RS02255 PF01638 HxlR-like helix-turn-helix AMD23_RS02280 PF13333 Integrase core domain AMD23_RS02280 PF13276 HTH-like domain AMD23_RS02280 PF00665 Integrase core domain AMD23_RS02290 PF13495 Phage integrase, N-terminal SAM-like domain AMD23_RS02290 PF00589 Phage integrase family AMD23_RS02295 PF00920 Dehydratase family AMD23_RS02315 PF00132 Bacterial transferase hexapeptide (six repeats) AMD23_RS02325 PF07690 Major Facilitator Superfamily AMD23_RS02330 PF01966 HD domain AMD23_RS02330 PF11871 Domain of unknown function (DUF3391) AMD23_RS02350 PF00171 Aldehyde dehydrogenase family AMD23_RS02360 PF01494 FAD binding domain AMD23_RS02370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD23_RS02370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD23_RS02375 PF00230 Major intrinsic protein AMD23_RS02380 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMD23_RS02380 PF01266 FAD dependent oxidoreductase AMD23_RS02385 PF00455 DeoR C terminal sensor domain AMD23_RS02385 PF08220 DeoR-like helix-turn-helix domain AMD23_RS02390 PF00970 Oxidoreductase FAD-binding domain AMD23_RS02390 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD23_RS02395 PF00355 Rieske [2Fe-2S] domain AMD23_RS02400 PF01144 Coenzyme A transferase AMD23_RS02405 PF01144 Coenzyme A transferase AMD23_RS02410 PF00108 Thiolase, N-terminal domain AMD23_RS02410 PF02803 Thiolase, C-terminal domain AMD23_RS02415 PF00775 Dioxygenase AMD23_RS02415 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD23_RS02425 PF10397 Adenylosuccinate lyase C-terminus AMD23_RS02425 PF00206 Lyase AMD23_RS02430 PF12146 Serine aminopeptidase, S33 AMD23_RS02435 PF02627 Carboxymuconolactone decarboxylase family AMD23_RS02445 PF01614 Bacterial transcriptional regulator AMD23_RS02445 PF09339 IclR helix-turn-helix domain AMD23_RS02455 PF07859 alpha/beta hydrolase fold AMD23_RS02460 PF10677 Protein of unknown function (DUF2490) AMD23_RS02465 PF13932 GidA associated domain AMD23_RS02465 PF01134 Glucose inhibited division protein A AMD23_RS02475 PF00291 Pyridoxal-phosphate dependent enzyme AMD23_RS02495 PF13649 Methyltransferase domain AMD23_RS02505 PF12697 Alpha/beta hydrolase family AMD23_RS02515 PF00155 Aminotransferase class I and II AMD23_RS02520 PF06968 Biotin and Thiamin Synthesis associated domain AMD23_RS02520 PF04055 Radical SAM superfamily AMD23_RS02530 PF01040 UbiA prenyltransferase family AMD23_RS02545 PF05819 NolX protein AMD23_RS02580 PF01313 Bacterial export proteins, family 3 AMD23_RS02585 PF00813 FliP family AMD23_RS02600 PF00771 FHIPEP family AMD23_RS02605 PF01312 FlhB HrpN YscU SpaS Family AMD23_RS02620 PF01514 Secretory protein of YscJ/FliF family AMD23_RS02635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD23_RS02635 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD23_RS02635 PF18269 T3SS EscN ATPase C-terminal domain AMD23_RS02645 PF01311 Bacterial export proteins, family 1 AMD23_RS02650 PF00263 Bacterial type II and III secretion system protein AMD23_RS02650 PF03958 Bacterial type II/III secretion system short domain AMD23_RS02660 PF01464 Transglycosylase SLT domain AMD23_RS02675 PF00924 Mechanosensitive ion channel AMD23_RS02675 PF12795 Mechanosensitive ion channel porin domain AMD23_RS02675 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMD23_RS02680 PF00884 Sulfatase AMD23_RS02685 PF03109 ABC1 family AMD23_RS02690 PF05661 Protein of unknown function (DUF808) AMD23_RS02695 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS02700 PF08323 Starch synthase catalytic domain AMD23_RS02700 PF00534 Glycosyl transferases group 1 AMD23_RS02705 PF00128 Alpha amylase, catalytic domain AMD23_RS02705 PF02806 Alpha amylase, C-terminal all-beta domain AMD23_RS02705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD23_RS02710 PF11941 Domain of unknown function (DUF3459) AMD23_RS02710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD23_RS02710 PF00128 Alpha amylase, catalytic domain AMD23_RS02715 PF02446 4-alpha-glucanotransferase AMD23_RS02720 PF00128 Alpha amylase, catalytic domain AMD23_RS02730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD23_RS02730 PF00128 Alpha amylase, catalytic domain AMD23_RS02735 PF13460 NAD(P)H-binding AMD23_RS02755 PF06903 VirK protein AMD23_RS02760 PF02321 Outer membrane efflux protein AMD23_RS02775 PF00873 AcrB/AcrD/AcrF family AMD23_RS02790 PF00271 Helicase conserved C-terminal domain AMD23_RS02790 PF00270 DEAD/DEAH box helicase AMD23_RS02795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD23_RS02795 PF00364 Biotin-requiring enzyme AMD23_RS02795 PF02817 e3 binding domain AMD23_RS02805 PF02780 Transketolase, C-terminal domain AMD23_RS02805 PF02779 Transketolase, pyrimidine binding domain AMD23_RS02810 PF00676 Dehydrogenase E1 component AMD23_RS02820 PF03301 Tryptophan 2,3-dioxygenase AMD23_RS02825 PF00854 POT family AMD23_RS02835 PF01047 MarR family AMD23_RS02840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD23_RS02845 PF04209 homogentisate 1,2-dioxygenase AMD23_RS02860 PF03334 Na+/H+ antiporter subunit AMD23_RS02865 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMD23_RS02875 PF00361 Proton-conducting membrane transporter AMD23_RS02880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD23_RS02885 PF13244 Domain of unknown function (DUF4040) AMD23_RS02885 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMD23_RS02885 PF00361 Proton-conducting membrane transporter AMD23_RS02885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD23_RS02900 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD23_RS02900 PF01447 Thermolysin metallopeptidase, catalytic domain AMD23_RS02900 PF01483 Proprotein convertase P-domain AMD23_RS02900 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD23_RS02905 PF00182 Chitinase class I AMD23_RS02925 PF01259 SAICAR synthetase AMD23_RS02930 PF05099 Tellurite resistance protein TerB AMD23_RS02930 PF00226 DnaJ domain AMD23_RS02940 PF00834 Ribulose-phosphate 3 epimerase family AMD23_RS02945 PF00583 Acetyltransferase (GNAT) family AMD23_RS02950 PF00781 Diacylglycerol kinase catalytic domain AMD23_RS02955 PF00425 chorismate binding enzyme AMD23_RS02955 PF04715 Anthranilate synthase component I, N terminal region AMD23_RS02965 PF00117 Glutamine amidotransferase class-I AMD23_RS02975 PF00591 Glycosyl transferase family, a/b domain AMD23_RS02975 PF02885 Glycosyl transferase family, helical bundle domain AMD23_RS02980 PF00218 Indole-3-glycerol phosphate synthase AMD23_RS02990 PF00325 Bacterial regulatory proteins, crp family AMD23_RS02990 PF00027 Cyclic nucleotide-binding domain AMD23_RS02995 PF02675 S-adenosylmethionine decarboxylase AMD23_RS03000 PF00893 Small Multidrug Resistance protein AMD23_RS03005 PF03232 Ubiquinone biosynthesis protein COQ7 AMD23_RS03010 PF00572 Ribosomal protein L13 AMD23_RS03015 PF00380 Ribosomal protein S9/S16 AMD23_RS03030 PF00293 NUDIX domain AMD23_RS03040 PF00210 Ferritin-like domain AMD23_RS03045 PF01627 Hpt domain AMD23_RS03045 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS03045 PF00072 Response regulator receiver domain AMD23_RS03045 PF00672 HAMP domain AMD23_RS03045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD23_RS03050 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS03050 PF00072 Response regulator receiver domain AMD23_RS03070 PF01521 Iron-sulphur cluster biosynthesis AMD23_RS03090 PF00293 NUDIX domain AMD23_RS03090 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD23_RS03090 PF09297 NADH pyrophosphatase zinc ribbon domain AMD23_RS03095 PF17113 Regulatory signalling modulator protein AmpE AMD23_RS03095 PF03186 CobD/Cbib protein AMD23_RS03115 PF07690 Major Facilitator Superfamily AMD23_RS03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS03120 PF03466 LysR substrate binding domain AMD23_RS03125 PF07690 Major Facilitator Superfamily AMD23_RS03130 PF12805 FUSC-like inner membrane protein yccS AMD23_RS03140 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD23_RS03140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD23_RS03140 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD23_RS03150 PF01808 AICARFT/IMPCHase bienzyme AMD23_RS03150 PF02142 MGS-like domain AMD23_RS03155 PF01066 CDP-alcohol phosphatidyltransferase AMD23_RS03160 PF12146 Serine aminopeptidase, S33 AMD23_RS03160 PF12147 Putative methyltransferase AMD23_RS03165 PF00782 Dual specificity phosphatase, catalytic domain AMD23_RS03195 PF02954 Bacterial regulatory protein, Fis family AMD23_RS03210 PF01381 Helix-turn-helix AMD23_RS03235 PF00289 Biotin carboxylase, N-terminal domain AMD23_RS03235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD23_RS03235 PF02785 Biotin carboxylase C-terminal domain AMD23_RS03245 PF00364 Biotin-requiring enzyme AMD23_RS03250 PF01220 Dehydroquinase class II AMD23_RS03255 PF02683 Cytochrome C biogenesis protein transmembrane region AMD23_RS03255 PF11412 Disulphide bond corrector protein DsbC AMD23_RS03260 PF03091 CutA1 divalent ion tolerance protein AMD23_RS03275 PF01852 START domain AMD23_RS03285 PF00106 short chain dehydrogenase AMD23_RS03290 PF04231 Endonuclease I AMD23_RS03295 PF00166 Chaperonin 10 Kd subunit AMD23_RS03300 PF00118 TCP-1/cpn60 chaperonin family AMD23_RS03310 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS03310 PF00593 TonB dependent receptor AMD23_RS03315 PF00793 DAHP synthetase I family AMD23_RS03330 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD23_RS03340 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD23_RS03340 PF08335 GlnD PII-uridylyltransferase AMD23_RS03345 PF02592 Putative vitamin uptake transporter AMD23_RS03365 PF00881 Nitroreductase family AMD23_RS03370 PF04264 YceI-like domain AMD23_RS03395 PF16957 Malonate decarboxylase, alpha subunit, transporter AMD23_RS03400 PF06857 Malonate decarboxylase delta subunit (MdcD) AMD23_RS03405 PF01039 Carboxyl transferase domain AMD23_RS03415 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AMD23_RS03420 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD23_RS03425 PF00698 Acyl transferase domain AMD23_RS03435 PF07729 FCD domain AMD23_RS03435 PF00392 Bacterial regulatory proteins, gntR family AMD23_RS03440 PF13419 Haloacid dehalogenase-like hydrolase AMD23_RS03470 PF07745 Glycosyl hydrolase family 53 AMD23_RS03475 PF00456 Transketolase, thiamine diphosphate binding domain AMD23_RS03475 PF17831 Pyruvate dehydrogenase E1 component middle domain AMD23_RS03480 PF13333 Integrase core domain AMD23_RS03480 PF00665 Integrase core domain AMD23_RS03480 PF13276 HTH-like domain AMD23_RS03490 PF00106 short chain dehydrogenase AMD23_RS03505 PF00106 short chain dehydrogenase AMD23_RS03515 PF13409 Glutathione S-transferase, N-terminal domain AMD23_RS03540 PF12823 Domain of unknown function (DUF3817) AMD23_RS03540 PF03176 MMPL family AMD23_RS03545 PF00326 Prolyl oligopeptidase family AMD23_RS03545 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD23_RS03550 PF07759 Protein of unknown function (DUF1615) AMD23_RS03560 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS03585 PF00892 EamA-like transporter family AMD23_RS03590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD23_RS03600 PF00324 Amino acid permease AMD23_RS03610 PF01544 CorA-like Mg2+ transporter protein AMD23_RS03620 PF01204 Trehalase AMD23_RS03630 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD23_RS03630 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD23_RS03655 PF00563 EAL domain AMD23_RS03655 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS03655 PF08448 PAS fold AMD23_RS03655 PF08447 PAS fold AMD23_RS03660 PF02203 Tar ligand binding domain homologue AMD23_RS03660 PF00672 HAMP domain AMD23_RS03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS03665 PF00553 Cellulose binding domain AMD23_RS03665 PF00150 Cellulase (glycosyl hydrolase family 5) AMD23_RS03670 PF01740 STAS domain AMD23_RS03670 PF00916 Sulfate permease family AMD23_RS03675 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS03690 PF13632 Glycosyl transferase family group 2 AMD23_RS03700 PF07694 5TMR of 5TMR-LYT AMD23_RS03700 PF06580 Histidine kinase AMD23_RS03705 PF04397 LytTr DNA-binding domain AMD23_RS03705 PF00072 Response regulator receiver domain AMD23_RS03710 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD23_RS03710 PF03900 Porphobilinogen deaminase, C-terminal domain AMD23_RS03735 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD23_RS03735 PF00326 Prolyl oligopeptidase family AMD23_RS03745 PF00155 Aminotransferase class I and II AMD23_RS03750 PF00326 Prolyl oligopeptidase family AMD23_RS03750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD23_RS03755 PF04304 Protein of unknown function (DUF454) AMD23_RS03765 PF01678 Diaminopimelate epimerase AMD23_RS03775 PF00589 Phage integrase family AMD23_RS03775 PF02899 Phage integrase, N-terminal SAM-like domain AMD23_RS03780 PF00227 Proteasome subunit AMD23_RS03785 PF00004 ATPase family associated with various cellular activities (AAA) AMD23_RS03785 PF10431 C-terminal, D2-small domain, of ClpB protein AMD23_RS03785 PF07724 AAA domain (Cdc48 subfamily) AMD23_RS03795 PF13673 Acetyltransferase (GNAT) domain AMD23_RS03800 PF13533 Biotin-lipoyl like AMD23_RS03810 PF01209 ubiE/COQ5 methyltransferase family AMD23_RS03815 PF00563 EAL domain AMD23_RS03815 PF03707 Bacterial signalling protein N terminal repeat AMD23_RS03815 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS03820 PF11838 ERAP1-like C-terminal domain AMD23_RS03820 PF01433 Peptidase family M1 domain AMD23_RS03840 PF13360 PQQ-like domain AMD23_RS03845 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD23_RS03860 PF00107 Zinc-binding dehydrogenase AMD23_RS03860 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS03870 PF02954 Bacterial regulatory protein, Fis family AMD23_RS03870 PF00158 Sigma-54 interaction domain AMD23_RS03870 PF01590 GAF domain AMD23_RS03875 PF00294 pfkB family carbohydrate kinase AMD23_RS03885 PF04085 rod shape-determining protein MreC AMD23_RS03895 PF03717 Penicillin-binding Protein dimerisation domain AMD23_RS03895 PF00905 Penicillin binding protein transpeptidase domain AMD23_RS03900 PF01098 Cell cycle protein AMD23_RS03905 PF00295 Glycosyl hydrolases family 28 AMD23_RS03910 PF13406 Transglycosylase SLT domain AMD23_RS03915 PF05036 Sporulation related domain AMD23_RS03915 PF03330 Lytic transglycolase AMD23_RS03925 PF07943 Penicillin-binding protein 5, C-terminal domain AMD23_RS03925 PF00768 D-alanyl-D-alanine carboxypeptidase AMD23_RS03935 PF04359 Protein of unknown function (DUF493) AMD23_RS03940 PF03099 Biotin/lipoate A/B protein ligase family AMD23_RS03945 PF04055 Radical SAM superfamily AMD23_RS03945 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMD23_RS03950 PF11818 C-terminal domain of tail specific protease (DUF3340) AMD23_RS03950 PF03572 Peptidase family S41 AMD23_RS03950 PF17804 Tail specific protease N-terminal domain AMD23_RS03950 PF00595 PDZ domain AMD23_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS03960 PF03466 LysR substrate binding domain AMD23_RS03970 PF00293 NUDIX domain AMD23_RS03970 PF01467 Cytidylyltransferase-like AMD23_RS04005 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD23_RS04005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD23_RS04010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD23_RS04010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD23_RS04015 PF04972 BON domain AMD23_RS04020 PF00360 Phytochrome region AMD23_RS04020 PF01590 GAF domain AMD23_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS04020 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS04020 PF08446 PAS fold AMD23_RS04025 PF00072 Response regulator receiver domain AMD23_RS04030 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS04035 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD23_RS04040 PF00106 short chain dehydrogenase AMD23_RS04080 PF03958 Bacterial type II/III secretion system short domain AMD23_RS04080 PF00263 Bacterial type II and III secretion system protein AMD23_RS04085 PF00437 Type II/IV secretion system protein AMD23_RS04090 PF00482 Type II secretion system (T2SS), protein F AMD23_RS04095 PF08334 Type II secretion system (T2SS), protein G AMD23_RS04095 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS04100 PF12019 Type II transport protein GspH AMD23_RS04100 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS04105 PF02501 Type II secretion system (T2SS), protein I AMD23_RS04105 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS04110 PF11612 Type II secretion system (T2SS), protein J AMD23_RS04110 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS04115 PF03934 Type II secretion system (T2SS), protein K AMD23_RS04155 PF00392 Bacterial regulatory proteins, gntR family AMD23_RS04155 PF07702 UTRA domain AMD23_RS04160 PF07690 Major Facilitator Superfamily AMD23_RS04165 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS04170 PF01380 SIS domain AMD23_RS04175 PF01979 Amidohydrolase family AMD23_RS04185 PF01966 HD domain AMD23_RS04185 PF01743 Poly A polymerase head domain AMD23_RS04185 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD23_RS04190 PF00732 GMC oxidoreductase AMD23_RS04190 PF05199 GMC oxidoreductase AMD23_RS04195 PF00171 Aldehyde dehydrogenase family AMD23_RS04200 PF02028 BCCT, betaine/carnitine/choline family transporter AMD23_RS04210 PF01323 DSBA-like thioredoxin domain AMD23_RS04220 PF00034 Cytochrome c AMD23_RS04225 PF01926 50S ribosome-binding GTPase AMD23_RS04230 PF10996 Beta-Casp domain AMD23_RS04230 PF00753 Metallo-beta-lactamase superfamily AMD23_RS04230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMD23_RS04240 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD23_RS04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS04245 PF00672 HAMP domain AMD23_RS04245 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS04250 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS04250 PF00072 Response regulator receiver domain AMD23_RS04265 PF02583 Metal-sensitive transcriptional repressor AMD23_RS04270 PF00107 Zinc-binding dehydrogenase AMD23_RS04270 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS04275 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD23_RS04280 PF00756 Putative esterase AMD23_RS04290 PF00155 Aminotransferase class I and II AMD23_RS04290 PF00392 Bacterial regulatory proteins, gntR family AMD23_RS04295 PF02567 Phenazine biosynthesis-like protein AMD23_RS04300 PF00892 EamA-like transporter family AMD23_RS04310 PF00005 ABC transporter AMD23_RS04310 PF12848 ABC transporter AMD23_RS04320 PF00464 Serine hydroxymethyltransferase AMD23_RS04325 PF03477 ATP cone domain AMD23_RS04335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD23_RS04335 PF01872 RibD C-terminal domain AMD23_RS04345 PF00677 Lumazine binding domain AMD23_RS04350 PF00925 GTP cyclohydrolase II AMD23_RS04350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD23_RS04355 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD23_RS04360 PF01029 NusB family AMD23_RS04365 PF00586 AIR synthase related protein, N-terminal domain AMD23_RS04365 PF02769 AIR synthase related protein, C-terminal domain AMD23_RS04385 PF03814 Potassium-transporting ATPase A subunit AMD23_RS04395 PF02669 K+-transporting ATPase, c chain AMD23_RS04400 PF13493 Domain of unknown function (DUF4118) AMD23_RS04400 PF13492 GAF domain AMD23_RS04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS04400 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS04400 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD23_RS04405 PF00072 Response regulator receiver domain AMD23_RS04405 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS04420 PF01565 FAD binding domain AMD23_RS04420 PF02913 FAD linked oxidases, C-terminal domain AMD23_RS04425 PF04307 LexA-binding, inner membrane-associated putative hydrolase AMD23_RS04430 PF02021 Uncharacterised protein family UPF0102 AMD23_RS04440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD23_RS04455 PF02381 MraZ protein, putative antitoxin-like AMD23_RS04460 PF01795 MraW methylase family AMD23_RS04465 PF04999 Cell division protein FtsL AMD23_RS04470 PF03717 Penicillin-binding Protein dimerisation domain AMD23_RS04470 PF00905 Penicillin binding protein transpeptidase domain AMD23_RS04475 PF08245 Mur ligase middle domain AMD23_RS04475 PF01225 Mur ligase family, catalytic domain AMD23_RS04475 PF02875 Mur ligase family, glutamate ligase domain AMD23_RS04480 PF08245 Mur ligase middle domain AMD23_RS04480 PF02875 Mur ligase family, glutamate ligase domain AMD23_RS04480 PF01225 Mur ligase family, catalytic domain AMD23_RS04485 PF00953 Glycosyl transferase family 4 AMD23_RS04490 PF01098 Cell cycle protein AMD23_RS04495 PF04101 Glycosyltransferase family 28 C-terminal domain AMD23_RS04495 PF03033 Glycosyltransferase family 28 N-terminal domain AMD23_RS04500 PF08245 Mur ligase middle domain AMD23_RS04500 PF02875 Mur ligase family, glutamate ligase domain AMD23_RS04500 PF01225 Mur ligase family, catalytic domain AMD23_RS04505 PF01820 D-ala D-ala ligase N-terminus AMD23_RS04505 PF07478 D-ala D-ala ligase C-terminus AMD23_RS04510 PF03799 Cell division protein FtsQ AMD23_RS04510 PF08478 POTRA domain, FtsQ-type AMD23_RS04515 PF02491 SHS2 domain inserted in FTSA AMD23_RS04520 PF12327 FtsZ family, C-terminal domain AMD23_RS04520 PF00091 Tubulin/FtsZ family, GTPase domain AMD23_RS04525 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD23_RS04535 PF08525 Opacity-associated protein A N-terminal motif AMD23_RS04535 PF01551 Peptidase family M23 AMD23_RS04535 PF01476 LysM domain AMD23_RS04540 PF01043 SecA preprotein cross-linking domain AMD23_RS04540 PF07516 SecA Wing and Scaffold domain AMD23_RS04540 PF02810 SEC-C motif AMD23_RS04540 PF07517 SecA DEAD-like domain AMD23_RS04545 PF00293 NUDIX domain AMD23_RS04555 PF02219 Methylenetetrahydrofolate reductase AMD23_RS04565 PF00107 Zinc-binding dehydrogenase AMD23_RS04565 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS04565 PF00698 Acyl transferase domain AMD23_RS04565 PF14765 Polyketide synthase dehydratase AMD23_RS04565 PF00550 Phosphopantetheine attachment site AMD23_RS04565 PF08659 KR domain AMD23_RS04565 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD23_RS04565 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD23_RS04565 PF16197 Ketoacyl-synthetase C-terminal extension AMD23_RS04570 PF00082 Subtilase family AMD23_RS04570 PF09286 Pro-kumamolisin, activation domain AMD23_RS04580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD23_RS04585 PF00128 Alpha amylase, catalytic domain AMD23_RS04615 PF13649 Methyltransferase domain AMD23_RS04620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD23_RS04620 PF05221 S-adenosyl-L-homocysteine hydrolase AMD23_RS04630 PF00311 Phosphoenolpyruvate carboxylase AMD23_RS04660 PF00328 Histidine phosphatase superfamily (branch 2) AMD23_RS04665 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD23_RS04665 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD23_RS04665 PF02772 S-adenosylmethionine synthetase, central domain AMD23_RS04675 PF13649 Methyltransferase domain AMD23_RS04680 PF01207 Dihydrouridine synthase (Dus) AMD23_RS04690 PF00294 pfkB family carbohydrate kinase AMD23_RS04695 PF07670 Nucleoside recognition AMD23_RS04695 PF07662 Na+ dependent nucleoside transporter C-terminus AMD23_RS04695 PF01773 Na+ dependent nucleoside transporter N-terminus AMD23_RS04700 PF00248 Aldo/keto reductase family AMD23_RS04710 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS04710 PF00593 TonB dependent receptor AMD23_RS04730 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS04735 PF00005 ABC transporter AMD23_RS04745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD23_RS04755 PF00005 ABC transporter AMD23_RS04760 PF13472 GDSL-like Lipase/Acylhydrolase family AMD23_RS04765 PF00072 Response regulator receiver domain AMD23_RS04765 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS04770 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS04770 PF08521 Two-component sensor kinase N-terminal AMD23_RS04785 PF01219 Prokaryotic diacylglycerol kinase AMD23_RS04805 PF01790 Prolipoprotein diacylglyceryl transferase AMD23_RS04810 PF00303 Thymidylate synthase AMD23_RS04820 PF00186 Dihydrofolate reductase AMD23_RS04825 PF00158 Sigma-54 interaction domain AMD23_RS04830 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD23_RS04830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD23_RS04835 PF00005 ABC transporter AMD23_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS04850 PF00296 Luciferase-like monooxygenase AMD23_RS04855 PF03358 NADPH-dependent FMN reductase AMD23_RS04875 PF00296 Luciferase-like monooxygenase AMD23_RS04880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD23_RS04885 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS04890 PF12911 N-terminal TM domain of oligopeptide transport permease C AMD23_RS04890 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS04895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD23_RS04895 PF00005 ABC transporter AMD23_RS04900 PF00149 Calcineurin-like phosphoesterase AMD23_RS04905 PF04379 ApaG domain AMD23_RS04910 PF00398 Ribosomal RNA adenine dimethylase AMD23_RS04915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD23_RS04920 PF09312 SurA N-terminal domain AMD23_RS04920 PF00639 PPIC-type PPIASE domain AMD23_RS04925 PF03968 OstA-like protein AMD23_RS04925 PF04453 LPS transport system D AMD23_RS04935 PF00850 Histone deacetylase domain AMD23_RS04940 PF01923 Cobalamin adenosyltransferase AMD23_RS04950 PF01494 FAD binding domain AMD23_RS04955 PF01494 FAD binding domain AMD23_RS04975 PF07729 FCD domain AMD23_RS04975 PF00392 Bacterial regulatory proteins, gntR family AMD23_RS04980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD23_RS04985 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD23_RS04985 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD23_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS04990 PF03466 LysR substrate binding domain AMD23_RS04995 PF00501 AMP-binding enzyme AMD23_RS04995 PF13193 AMP-binding enzyme C-terminal domain AMD23_RS05000 PF00171 Aldehyde dehydrogenase family AMD23_RS05005 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS05025 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD23_RS05030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD23_RS05030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD23_RS05035 PF18125 RlmM ferredoxin-like domain AMD23_RS05035 PF01728 FtsJ-like methyltransferase AMD23_RS05060 PF00892 EamA-like transporter family AMD23_RS05070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD23_RS05070 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD23_RS05085 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS05085 PF00072 Response regulator receiver domain AMD23_RS05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS05090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD23_RS05090 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS05090 PF00072 Response regulator receiver domain AMD23_RS05090 PF00672 HAMP domain AMD23_RS05090 PF01627 Hpt domain AMD23_RS05095 PF00072 Response regulator receiver domain AMD23_RS05095 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS05105 PF01625 Peptide methionine sulfoxide reductase AMD23_RS05115 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMD23_RS05120 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD23_RS05120 PF14760 Rnk N-terminus AMD23_RS05125 PF03466 LysR substrate binding domain AMD23_RS05125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS05130 PF13192 Thioredoxin domain AMD23_RS05135 PF00578 AhpC/TSA family AMD23_RS05135 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD23_RS05140 PF17827 PrmC N-terminal domain AMD23_RS05140 PF05175 Methyltransferase small domain AMD23_RS05145 PF00561 alpha/beta hydrolase fold AMD23_RS05155 PF00293 NUDIX domain AMD23_RS05160 PF00476 DNA polymerase family A AMD23_RS05160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD23_RS05160 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD23_RS05160 PF01612 3'-5' exonuclease AMD23_RS05190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD23_RS05190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD23_RS05190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD23_RS05215 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD23_RS05220 PF02233 NAD(P) transhydrogenase beta subunit AMD23_RS05235 PF01063 Amino-transferase class IV AMD23_RS05240 PF00082 Subtilase family AMD23_RS05240 PF04151 Bacterial pre-peptidase C-terminal domain AMD23_RS05245 PF04151 Bacterial pre-peptidase C-terminal domain AMD23_RS05245 PF00082 Subtilase family AMD23_RS05250 PF00082 Subtilase family AMD23_RS05250 PF04151 Bacterial pre-peptidase C-terminal domain AMD23_RS05255 PF04073 Aminoacyl-tRNA editing domain AMD23_RS05275 PF03358 NADPH-dependent FMN reductase AMD23_RS05280 PF03631 Virulence factor BrkB AMD23_RS05285 PF08534 Redoxin AMD23_RS05290 PF00708 Acylphosphatase AMD23_RS05300 PF03976 Polyphosphate kinase 2 (PPK2) AMD23_RS05305 PF00994 Probable molybdopterin binding domain AMD23_RS05315 PF03462 PCRF domain AMD23_RS05315 PF00472 RF-1 domain AMD23_RS05320 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD23_RS05320 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD23_RS05320 PF01488 Shikimate / quinate 5-dehydrogenase AMD23_RS05330 PF03550 Outer membrane lipoprotein LolB AMD23_RS05335 PF00288 GHMP kinases N terminal domain AMD23_RS05335 PF08544 GHMP kinases C terminal AMD23_RS05345 PF14572 Phosphoribosyl synthetase-associated domain AMD23_RS05345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD23_RS05350 PF01386 Ribosomal L25p family AMD23_RS05350 PF14693 Ribosomal protein TL5, C-terminal domain AMD23_RS05355 PF01195 Peptidyl-tRNA hydrolase AMD23_RS05360 PF06071 Protein of unknown function (DUF933) AMD23_RS05360 PF01926 50S ribosome-binding GTPase AMD23_RS05380 PF00009 Elongation factor Tu GTP binding domain AMD23_RS05380 PF03144 Elongation factor Tu domain 2 AMD23_RS05380 PF03143 Elongation factor Tu C-terminal domain AMD23_RS05390 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD23_RS05395 PF00467 KOW motif AMD23_RS05395 PF02357 Transcription termination factor nusG AMD23_RS05400 PF00298 Ribosomal protein L11, RNA binding domain AMD23_RS05400 PF03946 Ribosomal protein L11, N-terminal domain AMD23_RS05405 PF00687 Ribosomal protein L1p/L10e family AMD23_RS05410 PF00466 Ribosomal protein L10 AMD23_RS05415 PF16320 Ribosomal protein L7/L12 dimerisation domain AMD23_RS05415 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD23_RS05420 PF00562 RNA polymerase Rpb2, domain 6 AMD23_RS05420 PF10385 RNA polymerase beta subunit external 1 domain AMD23_RS05420 PF04560 RNA polymerase Rpb2, domain 7 AMD23_RS05420 PF04561 RNA polymerase Rpb2, domain 2 AMD23_RS05420 PF04563 RNA polymerase beta subunit AMD23_RS05420 PF04565 RNA polymerase Rpb2, domain 3 AMD23_RS05425 PF05000 RNA polymerase Rpb1, domain 4 AMD23_RS05425 PF04983 RNA polymerase Rpb1, domain 3 AMD23_RS05425 PF00623 RNA polymerase Rpb1, domain 2 AMD23_RS05425 PF04998 RNA polymerase Rpb1, domain 5 AMD23_RS05425 PF04997 RNA polymerase Rpb1, domain 1 AMD23_RS05430 PF00164 Ribosomal protein S12/S23 AMD23_RS05435 PF00177 Ribosomal protein S7p/S5e AMD23_RS05440 PF03764 Elongation factor G, domain IV AMD23_RS05440 PF00009 Elongation factor Tu GTP binding domain AMD23_RS05440 PF03144 Elongation factor Tu domain 2 AMD23_RS05440 PF14492 Elongation Factor G, domain II AMD23_RS05440 PF00679 Elongation factor G C-terminus AMD23_RS05445 PF03143 Elongation factor Tu C-terminal domain AMD23_RS05445 PF00009 Elongation factor Tu GTP binding domain AMD23_RS05445 PF03144 Elongation factor Tu domain 2 AMD23_RS05450 PF00338 Ribosomal protein S10p/S20e AMD23_RS05455 PF00297 Ribosomal protein L3 AMD23_RS05460 PF00573 Ribosomal protein L4/L1 family AMD23_RS05465 PF00276 Ribosomal protein L23 AMD23_RS05470 PF00181 Ribosomal Proteins L2, RNA binding domain AMD23_RS05470 PF03947 Ribosomal Proteins L2, C-terminal domain AMD23_RS05475 PF00203 Ribosomal protein S19 AMD23_RS05480 PF00237 Ribosomal protein L22p/L17e AMD23_RS05485 PF07650 KH domain AMD23_RS05485 PF00189 Ribosomal protein S3, C-terminal domain AMD23_RS05490 PF00252 Ribosomal protein L16p/L10e AMD23_RS05495 PF00831 Ribosomal L29 protein AMD23_RS05500 PF00366 Ribosomal protein S17 AMD23_RS05505 PF00238 Ribosomal protein L14p/L23e AMD23_RS05510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMD23_RS05510 PF00467 KOW motif AMD23_RS05515 PF00281 Ribosomal protein L5 AMD23_RS05515 PF00673 ribosomal L5P family C-terminus AMD23_RS05520 PF00253 Ribosomal protein S14p/S29e AMD23_RS05525 PF00410 Ribosomal protein S8 AMD23_RS05530 PF00347 Ribosomal protein L6 AMD23_RS05535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMD23_RS05540 PF00333 Ribosomal protein S5, N-terminal domain AMD23_RS05540 PF03719 Ribosomal protein S5, C-terminal domain AMD23_RS05545 PF00327 Ribosomal protein L30p/L7e AMD23_RS05550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMD23_RS05555 PF00344 SecY translocase AMD23_RS05560 PF00416 Ribosomal protein S13/S18 AMD23_RS05565 PF00411 Ribosomal protein S11 AMD23_RS05570 PF01479 S4 domain AMD23_RS05570 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD23_RS05575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD23_RS05575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD23_RS05575 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD23_RS05580 PF01196 Ribosomal protein L17 AMD23_RS05585 PF02600 Disulfide bond formation protein DsbB AMD23_RS05600 PF01474 Class-II DAHP synthetase family AMD23_RS05610 PF01425 Amidase AMD23_RS05620 PF00009 Elongation factor Tu GTP binding domain AMD23_RS05620 PF03144 Elongation factor Tu domain 2 AMD23_RS05620 PF00679 Elongation factor G C-terminus AMD23_RS05625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD23_RS05630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD23_RS05630 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD23_RS05635 PF02798 Glutathione S-transferase, N-terminal domain AMD23_RS05635 PF00043 Glutathione S-transferase, C-terminal domain AMD23_RS05645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD23_RS05645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS05650 PF00107 Zinc-binding dehydrogenase AMD23_RS05650 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS05655 PF00691 OmpA family AMD23_RS05655 PF05736 OprF membrane domain AMD23_RS05665 PF00849 RNA pseudouridylate synthase AMD23_RS05675 PF00155 Aminotransferase class I and II AMD23_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS05690 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS05695 PF12857 TOBE-like domain AMD23_RS05695 PF00005 ABC transporter AMD23_RS05695 PF17850 CysA C-terminal regulatory domain AMD23_RS05705 PF00107 Zinc-binding dehydrogenase AMD23_RS05705 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS05720 PF04185 Phosphoesterase family AMD23_RS05720 PF05506 Domain of unknown function (DUF756) AMD23_RS05725 PF10459 Peptidase S46 AMD23_RS05730 PF10459 Peptidase S46 AMD23_RS05735 PF00300 Histidine phosphatase superfamily (branch 1) AMD23_RS05740 PF02875 Mur ligase family, glutamate ligase domain AMD23_RS05740 PF08245 Mur ligase middle domain AMD23_RS05755 PF00156 Phosphoribosyl transferase domain AMD23_RS05760 PF04305 Protein of unknown function (DUF455) AMD23_RS05780 PF00149 Calcineurin-like phosphoesterase AMD23_RS05785 PF01569 PAP2 superfamily AMD23_RS05790 PF13439 Glycosyltransferase Family 4 AMD23_RS05790 PF00534 Glycosyl transferases group 1 AMD23_RS05795 PF02541 Ppx/GppA phosphatase family AMD23_RS05800 PF02503 Polyphosphate kinase middle domain AMD23_RS05800 PF13089 Polyphosphate kinase N-terminal domain AMD23_RS05800 PF13090 Polyphosphate kinase C-terminal domain 2 AMD23_RS05800 PF17941 Polyphosphate kinase C-terminal domain 1 AMD23_RS05805 PF11808 Phosphate regulon sensor protein PhoR AMD23_RS05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS05805 PF00989 PAS fold AMD23_RS05805 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS05810 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS05810 PF00072 Response regulator receiver domain AMD23_RS05815 PF01435 Peptidase family M48 AMD23_RS05815 PF13181 Tetratricopeptide repeat AMD23_RS05820 PF00462 Glutaredoxin AMD23_RS05830 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD23_RS05960 PF13276 HTH-like domain AMD23_RS05960 PF13333 Integrase core domain AMD23_RS05960 PF00665 Integrase core domain AMD23_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS05975 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS05975 PF00989 PAS fold AMD23_RS05985 PF05697 Bacterial trigger factor protein (TF) AMD23_RS05985 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD23_RS05990 PF00574 Clp protease AMD23_RS05995 PF07724 AAA domain (Cdc48 subfamily) AMD23_RS05995 PF06689 ClpX C4-type zinc finger AMD23_RS05995 PF10431 C-terminal, D2-small domain, of ClpB protein AMD23_RS06000 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD23_RS06000 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMD23_RS06000 PF00004 ATPase family associated with various cellular activities (AAA) AMD23_RS06005 PF00216 Bacterial DNA-binding protein AMD23_RS06030 PF01476 LysM domain AMD23_RS06030 PF05257 CHAP domain AMD23_RS06035 PF00753 Metallo-beta-lactamase superfamily AMD23_RS06035 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD23_RS06045 PF00075 RNase H AMD23_RS06050 PF00929 Exonuclease AMD23_RS06070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD23_RS06080 PF00753 Metallo-beta-lactamase superfamily AMD23_RS06080 PF12706 Beta-lactamase superfamily domain AMD23_RS06085 PF04055 Radical SAM superfamily AMD23_RS06085 PF06463 Molybdenum Cofactor Synthesis C AMD23_RS06095 PF01967 MoaC family AMD23_RS06100 PF02597 ThiS family AMD23_RS06105 PF02391 MoaE protein AMD23_RS06155 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD23_RS06155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMD23_RS06155 PF12169 DNA polymerase III subunits gamma and tau domain III AMD23_RS06160 PF02575 YbaB/EbfC DNA-binding family AMD23_RS06165 PF02132 RecR protein AMD23_RS06165 PF13662 Toprim domain AMD23_RS06170 PF01230 HIT domain AMD23_RS06190 PF17863 AAA lid domain AMD23_RS06190 PF07726 ATPase family associated with various cellular activities (AAA) AMD23_RS06210 PF02545 Maf-like protein AMD23_RS06215 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMD23_RS06220 PF01783 Ribosomal L32p protein family AMD23_RS06225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD23_RS06225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD23_RS06235 PF00698 Acyl transferase domain AMD23_RS06245 PF00550 Phosphopantetheine attachment site AMD23_RS06250 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD23_RS06250 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD23_RS06255 PF00425 chorismate binding enzyme AMD23_RS06255 PF04715 Anthranilate synthase component I, N terminal region AMD23_RS06260 PF02618 YceG-like family AMD23_RS06265 PF09115 DNA polymerase III, delta subunit, C terminal AMD23_RS06285 PF02954 Bacterial regulatory protein, Fis family AMD23_RS06285 PF00158 Sigma-54 interaction domain AMD23_RS06285 PF06506 Propionate catabolism activator AMD23_RS06295 PF00285 Citrate synthase, C-terminal domain AMD23_RS06300 PF00330 Aconitase family (aconitate hydratase) AMD23_RS06300 PF00694 Aconitase C-terminal domain AMD23_RS06305 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AMD23_RS06310 PF04303 PrpF protein AMD23_RS06315 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS06315 PF00593 TonB dependent receptor AMD23_RS06325 PF00207 Alpha-2-macroglobulin family AMD23_RS06325 PF07703 Alpha-2-macroglobulin bait region domain AMD23_RS06325 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AMD23_RS06325 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AMD23_RS06325 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AMD23_RS06325 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AMD23_RS06325 PF17962 Bacterial macroglobulin domain 6 AMD23_RS06325 PF01835 MG2 domain AMD23_RS06340 PF00905 Penicillin binding protein transpeptidase domain AMD23_RS06340 PF06832 Penicillin-Binding Protein C-terminus Family AMD23_RS06340 PF00912 Transglycosylase AMD23_RS06350 PF08534 Redoxin AMD23_RS06360 PF01556 DnaJ C terminal domain AMD23_RS06360 PF00226 DnaJ domain AMD23_RS06365 PF00072 Response regulator receiver domain AMD23_RS06370 PF12221 Bacterial membrane protein N terminal AMD23_RS06370 PF01145 SPFH domain / Band 7 family AMD23_RS06375 PF01145 SPFH domain / Band 7 family AMD23_RS06385 PF00709 Adenylosuccinate synthetase AMD23_RS06390 PF11838 ERAP1-like C-terminal domain AMD23_RS06390 PF01433 Peptidase family M1 domain AMD23_RS06405 PF00440 Bacterial regulatory proteins, tetR family AMD23_RS06475 PF00300 Histidine phosphatase superfamily (branch 1) AMD23_RS06475 PF13456 Reverse transcriptase-like AMD23_RS06480 PF01256 Carbohydrate kinase AMD23_RS06490 PF00723 Glycosyl hydrolases family 15 AMD23_RS06500 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD23_RS06500 PF07971 Glycosyl hydrolase family 92 AMD23_RS06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS06540 PF17755 UvrA DNA-binding domain AMD23_RS06545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD23_RS06545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD23_RS06550 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD23_RS06550 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD23_RS06555 PF01799 [2Fe-2S] binding domain AMD23_RS06555 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD23_RS06590 PF00717 Peptidase S24-like AMD23_RS06590 PF01726 LexA DNA binding domain AMD23_RS06605 PF02811 PHP domain AMD23_RS06605 PF14579 Helix-hairpin-helix motif AMD23_RS06605 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD23_RS06605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD23_RS06610 PF00326 Prolyl oligopeptidase family AMD23_RS06620 PF03169 OPT oligopeptide transporter protein AMD23_RS06635 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD23_RS06635 PF00326 Prolyl oligopeptidase family AMD23_RS06635 PF07676 WD40-like Beta Propeller Repeat AMD23_RS06650 PF12833 Helix-turn-helix domain AMD23_RS06650 PF02311 AraC-like ligand binding domain AMD23_RS06665 PF00199 Catalase AMD23_RS06665 PF06628 Catalase-related immune-responsive AMD23_RS06665 PF18011 C-terminal domain found in long catalases AMD23_RS06670 PF00248 Aldo/keto reductase family AMD23_RS06675 PF00135 Carboxylesterase family AMD23_RS06680 PF02347 Glycine cleavage system P-protein AMD23_RS06685 PF07690 Major Facilitator Superfamily AMD23_RS06700 PF08019 Phosphoethanolamine transferase EptA/EptB AMD23_RS06700 PF00884 Sulfatase AMD23_RS06715 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS06715 PF00072 Response regulator receiver domain AMD23_RS06720 PF08521 Two-component sensor kinase N-terminal AMD23_RS06720 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS06730 PF03776 Septum formation topological specificity factor MinE AMD23_RS06735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD23_RS06740 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD23_RS06740 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD23_RS06755 PF07730 Histidine kinase AMD23_RS06760 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS06760 PF00072 Response regulator receiver domain AMD23_RS06775 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD23_RS06800 PF02222 ATP-grasp domain AMD23_RS06810 PF04376 Arginine-tRNA-protein transferase, N terminus AMD23_RS06810 PF04377 Arginine-tRNA-protein transferase, C terminus AMD23_RS06835 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS06850 PF17755 UvrA DNA-binding domain AMD23_RS06850 PF00005 ABC transporter AMD23_RS06850 PF17760 UvrA interaction domain AMD23_RS06855 PF00829 Ribosomal prokaryotic L21 protein AMD23_RS06860 PF01016 Ribosomal L27 protein AMD23_RS06865 PF01926 50S ribosome-binding GTPase AMD23_RS06865 PF01018 GTP1/OBG AMD23_RS06870 PF01649 Ribosomal protein S20 AMD23_RS06875 PF03023 Lipid II flippase MurJ AMD23_RS06880 PF01687 Riboflavin kinase AMD23_RS06880 PF06574 FAD synthetase AMD23_RS06885 PF06827 Zinc finger found in FPG and IleRS AMD23_RS06885 PF08264 Anticodon-binding domain of tRNA AMD23_RS06885 PF00133 tRNA synthetases class I (I, L, M and V) AMD23_RS06890 PF01252 Signal peptidase (SPase) II AMD23_RS06895 PF02401 LytB protein AMD23_RS06905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD23_RS06905 PF06481 COX Aromatic Rich Motif AMD23_RS06910 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD23_RS06915 PF00510 Cytochrome c oxidase subunit III AMD23_RS06920 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMD23_RS06930 PF18073 Rubredoxin metal binding domain AMD23_RS06935 PF05656 Protein of unknown function (DUF805) AMD23_RS06945 PF12833 Helix-turn-helix domain AMD23_RS06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS06950 PF00183 Hsp90 protein AMD23_RS06960 PF01740 STAS domain AMD23_RS06960 PF08678 Rsbr N terminal AMD23_RS06965 PF01740 STAS domain AMD23_RS06970 PF13581 Histidine kinase-like ATPase domain AMD23_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS06980 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS06980 PF00072 Response regulator receiver domain AMD23_RS06980 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD23_RS06980 PF01627 Hpt domain AMD23_RS06980 PF00672 HAMP domain AMD23_RS06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS06985 PF00072 Response regulator receiver domain AMD23_RS06985 PF13188 PAS domain AMD23_RS06985 PF08448 PAS fold AMD23_RS06985 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS06990 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD23_RS06990 PF04616 Glycosyl hydrolases family 43 AMD23_RS06995 PF00593 TonB dependent receptor AMD23_RS06995 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS07000 PF00085 Thioredoxin AMD23_RS07005 PF07237 Protein of unknown function (DUF1428) AMD23_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS07010 PF13492 GAF domain AMD23_RS07010 PF13493 Domain of unknown function (DUF4118) AMD23_RS07010 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD23_RS07010 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS07015 PF01339 CheB methylesterase AMD23_RS07020 PF01739 CheR methyltransferase, SAM binding domain AMD23_RS07020 PF03705 CheR methyltransferase, all-alpha domain AMD23_RS07025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD23_RS07025 PF00072 Response regulator receiver domain AMD23_RS07025 PF01627 Hpt domain AMD23_RS07025 PF00672 HAMP domain AMD23_RS07025 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS07030 PF13426 PAS domain AMD23_RS07030 PF00072 Response regulator receiver domain AMD23_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS07035 PF00072 Response regulator receiver domain AMD23_RS07040 PF00722 Glycosyl hydrolases family 16 AMD23_RS07045 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMD23_RS07055 PF01263 Aldose 1-epimerase AMD23_RS07060 PF01578 Cytochrome C assembly protein AMD23_RS07065 PF02881 SRP54-type protein, helical bundle domain AMD23_RS07065 PF02978 Signal peptide binding domain AMD23_RS07065 PF00448 SRP54-type protein, GTPase domain AMD23_RS07070 PF03060 Nitronate monooxygenase AMD23_RS07075 PF01063 Amino-transferase class IV AMD23_RS07080 PF00886 Ribosomal protein S16 AMD23_RS07085 PF01782 RimM N-terminal domain AMD23_RS07085 PF05239 PRC-barrel domain AMD23_RS07090 PF01746 tRNA (Guanine-1)-methyltransferase AMD23_RS07095 PF01245 Ribosomal protein L19 AMD23_RS07120 PF01479 S4 domain AMD23_RS07125 PF00141 Peroxidase AMD23_RS07135 PF00488 MutS domain V AMD23_RS07135 PF05192 MutS domain III AMD23_RS07135 PF05188 MutS domain II AMD23_RS07135 PF01624 MutS domain I AMD23_RS07135 PF05190 MutS family domain IV AMD23_RS07145 PF05593 RHS Repeat AMD23_RS07145 PF03527 RHS protein AMD23_RS07165 PF00703 Glycosyl hydrolases family 2 AMD23_RS07165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD23_RS07165 PF16355 Domain of unknown function (DUF4982) AMD23_RS07165 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD23_RS07165 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD23_RS07170 PF07745 Glycosyl hydrolase family 53 AMD23_RS07180 PF01381 Helix-turn-helix AMD23_RS07180 PF06114 IrrE N-terminal-like domain AMD23_RS07180 PF09856 Predicted transcriptional regulator (DUF2083) AMD23_RS07185 PF00171 Aldehyde dehydrogenase family AMD23_RS07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD23_RS07190 PF02770 Acyl-CoA dehydrogenase, middle domain AMD23_RS07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD23_RS07195 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS07200 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS07200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD23_RS07200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD23_RS07205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD23_RS07205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD23_RS07210 PF01545 Cation efflux family AMD23_RS07215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD23_RS07215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD23_RS07215 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS07220 PF08281 Sigma-70, region 4 AMD23_RS07220 PF04542 Sigma-70 region 2 AMD23_RS07230 PF13180 PDZ domain AMD23_RS07235 PF00679 Elongation factor G C-terminus AMD23_RS07235 PF00009 Elongation factor Tu GTP binding domain AMD23_RS07235 PF06421 GTP-binding protein LepA C-terminus AMD23_RS07235 PF03144 Elongation factor Tu domain 2 AMD23_RS07240 PF10502 Signal peptidase, peptidase S26 AMD23_RS07250 PF14622 Ribonuclease-III-like AMD23_RS07250 PF00035 Double-stranded RNA binding motif AMD23_RS07255 PF07650 KH domain AMD23_RS07255 PF01926 50S ribosome-binding GTPase AMD23_RS07260 PF11967 Recombination protein O N terminal AMD23_RS07260 PF02565 Recombination protein O C terminal AMD23_RS07270 PF05958 tRNA (Uracil-5-)-methyltransferase AMD23_RS07275 PF01928 CYTH domain AMD23_RS07280 PF01323 DSBA-like thioredoxin domain AMD23_RS07285 PF01593 Flavin containing amine oxidoreductase AMD23_RS07290 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD23_RS07295 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD23_RS07300 PF00156 Phosphoribosyl transferase domain AMD23_RS07305 PF01048 Phosphorylase superfamily AMD23_RS07310 PF00313 'Cold-shock' DNA-binding domain AMD23_RS07315 PF01494 FAD binding domain AMD23_RS07325 PF00271 Helicase conserved C-terminal domain AMD23_RS07325 PF08494 DEAD/H associated AMD23_RS07325 PF00270 DEAD/DEAH box helicase AMD23_RS07330 PF04675 DNA ligase N terminus AMD23_RS07330 PF04679 ATP dependent DNA ligase C terminal region AMD23_RS07330 PF01068 ATP dependent DNA ligase domain AMD23_RS07340 PF04679 ATP dependent DNA ligase C terminal region AMD23_RS07340 PF04675 DNA ligase N terminus AMD23_RS07340 PF01068 ATP dependent DNA ligase domain AMD23_RS07355 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS07355 PF00072 Response regulator receiver domain AMD23_RS07370 PF00108 Thiolase, N-terminal domain AMD23_RS07370 PF02803 Thiolase, C-terminal domain AMD23_RS07375 PF12951 Passenger-associated-transport-repeat AMD23_RS07375 PF03797 Autotransporter beta-domain AMD23_RS07375 PF00082 Subtilase family AMD23_RS07380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD23_RS07380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD23_RS07390 PF01863 Protein of unknown function DUF45 AMD23_RS07395 PF07043 Protein of unknown function (DUF1328) AMD23_RS07405 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD23_RS07430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD23_RS07440 PF03831 PhnA domain AMD23_RS07440 PF08274 PhnA Zinc-Ribbon AMD23_RS07445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD23_RS07450 PF07690 Major Facilitator Superfamily AMD23_RS07485 PF09924 Uncharacterised conserved protein (DUF2156) AMD23_RS07485 PF03706 Lysylphosphatidylglycerol synthase TM region AMD23_RS07495 PF01042 Endoribonuclease L-PSP AMD23_RS07540 PF04545 Sigma-70, region 4 AMD23_RS07540 PF04542 Sigma-70 region 2 AMD23_RS07560 PF04060 Putative Fe-S cluster AMD23_RS07570 PF09334 tRNA synthetases class I (M) AMD23_RS07570 PF01588 Putative tRNA binding domain AMD23_RS07585 PF13732 Domain of unknown function (DUF4162) AMD23_RS07585 PF00005 ABC transporter AMD23_RS07590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD23_RS07595 PF00324 Amino acid permease AMD23_RS07600 PF02574 Homocysteine S-methyltransferase AMD23_RS07610 PF02592 Putative vitamin uptake transporter AMD23_RS07630 PF03551 Transcriptional regulator PadR-like family AMD23_RS07650 PF03653 Uncharacterised protein family (UPF0093) AMD23_RS07665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD23_RS07670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD23_RS07670 PF14579 Helix-hairpin-helix motif AMD23_RS07670 PF02811 PHP domain AMD23_RS07670 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD23_RS07670 PF01336 OB-fold nucleic acid binding domain AMD23_RS07675 PF01351 Ribonuclease HII AMD23_RS07680 PF02684 Lipid-A-disaccharide synthetase AMD23_RS07685 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD23_RS07685 PF00132 Bacterial transferase hexapeptide (six repeats) AMD23_RS07690 PF07977 FabA-like domain AMD23_RS07695 PF00132 Bacterial transferase hexapeptide (six repeats) AMD23_RS07695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD23_RS07705 PF01103 Surface antigen AMD23_RS07705 PF07244 Surface antigen variable number repeat AMD23_RS07710 PF02163 Peptidase family M50 AMD23_RS07710 PF17820 PDZ domain AMD23_RS07715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD23_RS07715 PF13288 DXP reductoisomerase C-terminal domain AMD23_RS07715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMD23_RS07725 PF01255 Putative undecaprenyl diphosphate synthase AMD23_RS07730 PF01765 Ribosome recycling factor AMD23_RS07735 PF00696 Amino acid kinase family AMD23_RS07740 PF00072 Response regulator receiver domain AMD23_RS07740 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS07745 PF00889 Elongation factor TS AMD23_RS07750 PF00318 Ribosomal protein S2 AMD23_RS07785 PF00557 Metallopeptidase family M24 AMD23_RS07790 PF01909 Nucleotidyltransferase domain AMD23_RS07790 PF01966 HD domain AMD23_RS07790 PF08335 GlnD PII-uridylyltransferase AMD23_RS07795 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD23_RS07795 PF00132 Bacterial transferase hexapeptide (six repeats) AMD23_RS07795 PF14602 Hexapeptide repeat of succinyl-transferase AMD23_RS07800 PF03960 ArsC family AMD23_RS07805 PF01546 Peptidase family M20/M25/M40 AMD23_RS07805 PF07687 Peptidase dimerisation domain AMD23_RS07810 PF00733 Asparagine synthase AMD23_RS07810 PF13537 Glutamine amidotransferase domain AMD23_RS07820 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS07820 PF00593 TonB dependent receptor AMD23_RS07835 PF00210 Ferritin-like domain AMD23_RS07840 PF05724 Thiopurine S-methyltransferase (TPMT) AMD23_RS07850 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD23_RS07850 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD23_RS07865 PF02321 Outer membrane efflux protein AMD23_RS07870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS07870 PF00529 HlyD membrane-fusion protein of T1SS AMD23_RS07875 PF07690 Major Facilitator Superfamily AMD23_RS07885 PF14310 Fibronectin type III-like domain AMD23_RS07885 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD23_RS07885 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD23_RS07895 PF00854 POT family AMD23_RS07920 PF12802 MarR family AMD23_RS07925 PF01432 Peptidase family M3 AMD23_RS07930 PF00255 Glutathione peroxidase AMD23_RS07935 PF00970 Oxidoreductase FAD-binding domain AMD23_RS07935 PF00175 Oxidoreductase NAD-binding domain AMD23_RS07940 PF00005 ABC transporter AMD23_RS07945 PF05681 Fumarate hydratase (Fumerase) AMD23_RS07945 PF05683 Fumarase C-terminus AMD23_RS07955 PF00484 Carbonic anhydrase AMD23_RS07960 PF02253 Phospholipase A1 AMD23_RS07970 PF00313 'Cold-shock' DNA-binding domain AMD23_RS07985 PF00899 ThiF family AMD23_RS07990 PF01026 TatD related DNase AMD23_RS08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD23_RS08005 PF02770 Acyl-CoA dehydrogenase, middle domain AMD23_RS08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD23_RS08015 PF00043 Glutathione S-transferase, C-terminal domain AMD23_RS08015 PF02798 Glutathione S-transferase, N-terminal domain AMD23_RS08025 PF13537 Glutamine amidotransferase domain AMD23_RS08025 PF00733 Asparagine synthase AMD23_RS08030 PF03358 NADPH-dependent FMN reductase AMD23_RS08035 PF03796 DnaB-like helicase C terminal domain AMD23_RS08035 PF00772 DnaB-like helicase N terminal domain AMD23_RS08040 PF00875 DNA photolyase AMD23_RS08040 PF03441 FAD binding domain of DNA photolyase AMD23_RS08045 PF00691 OmpA family AMD23_RS08045 PF05736 OprF membrane domain AMD23_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS08050 PF03466 LysR substrate binding domain AMD23_RS08065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS08065 PF00529 HlyD membrane-fusion protein of T1SS AMD23_RS08070 PF00873 AcrB/AcrD/AcrF family AMD23_RS08075 PF00106 short chain dehydrogenase AMD23_RS08080 PF02321 Outer membrane efflux protein AMD23_RS08085 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS08095 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS08160 PF01527 Transposase AMD23_RS08195 PF00082 Subtilase family AMD23_RS08200 PF01668 SmpB protein AMD23_RS08205 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD23_RS08210 PF03658 RnfH family Ubiquitin AMD23_RS08215 PF04355 SmpA / OmlA family AMD23_RS08220 PF01475 Ferric uptake regulator family AMD23_RS08225 PF02463 RecF/RecN/SMC N terminal domain AMD23_RS08230 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD23_RS08230 PF01628 HrcA protein C terminal domain AMD23_RS08235 PF01025 GrpE AMD23_RS08240 PF00012 Hsp70 protein AMD23_RS08245 PF00226 DnaJ domain AMD23_RS08245 PF01556 DnaJ C terminal domain AMD23_RS08245 PF00684 DnaJ central domain AMD23_RS08250 PF08543 Phosphomethylpyrimidine kinase AMD23_RS08275 PF03412 Peptidase C39 family AMD23_RS08275 PF00005 ABC transporter AMD23_RS08275 PF00664 ABC transporter transmembrane region AMD23_RS08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS08280 PF03466 LysR substrate binding domain AMD23_RS08285 PF00664 ABC transporter transmembrane region AMD23_RS08285 PF00005 ABC transporter AMD23_RS08290 PF01205 Uncharacterized protein family UPF0029 AMD23_RS08295 PF03641 Possible lysine decarboxylase AMD23_RS08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS08300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD23_RS08305 PF02817 e3 binding domain AMD23_RS08305 PF00364 Biotin-requiring enzyme AMD23_RS08305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD23_RS08310 PF00676 Dehydrogenase E1 component AMD23_RS08310 PF16870 2-oxoglutarate dehydrogenase C-terminal AMD23_RS08310 PF02779 Transketolase, pyrimidine binding domain AMD23_RS08310 PF16078 2-oxoglutarate dehydrogenase N-terminus AMD23_RS08320 PF08007 Cupin superfamily protein AMD23_RS08330 PF08328 Adenylosuccinate lyase C-terminal AMD23_RS08330 PF00206 Lyase AMD23_RS08340 PF03471 Transporter associated domain AMD23_RS08340 PF01595 Cyclin M transmembrane N-terminal domain AMD23_RS08340 PF00571 CBS domain AMD23_RS08345 PF00206 Lyase AMD23_RS08345 PF10415 Fumarase C C-terminus AMD23_RS08370 PF00005 ABC transporter AMD23_RS08375 PF00392 Bacterial regulatory proteins, gntR family AMD23_RS08380 PF00255 Glutathione peroxidase AMD23_RS08385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD23_RS08385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD23_RS08390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD23_RS08390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD23_RS08390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD23_RS08395 PF04102 SlyX AMD23_RS08410 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS08415 PF07690 Major Facilitator Superfamily AMD23_RS08420 PF00294 pfkB family carbohydrate kinase AMD23_RS08430 PF02310 B12 binding domain AMD23_RS08430 PF02574 Homocysteine S-methyltransferase AMD23_RS08430 PF00809 Pterin binding enzyme AMD23_RS08430 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD23_RS08430 PF02607 B12 binding domain AMD23_RS08435 PF00809 Pterin binding enzyme AMD23_RS08435 PF02574 Homocysteine S-methyltransferase AMD23_RS08440 PF01209 ubiE/COQ5 methyltransferase family AMD23_RS08445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD23_RS08445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD23_RS08445 PF02770 Acyl-CoA dehydrogenase, middle domain AMD23_RS08460 PF08206 Ribonuclease B OB domain AMD23_RS08460 PF08461 Ribonuclease R winged-helix domain AMD23_RS08460 PF17876 Cold shock domain AMD23_RS08460 PF00575 S1 RNA binding domain AMD23_RS08460 PF00773 RNB domain AMD23_RS08470 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD23_RS08470 PF00588 SpoU rRNA Methylase family AMD23_RS08475 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS08480 PF00929 Exonuclease AMD23_RS08490 PF01895 PhoU domain AMD23_RS08495 PF00005 ABC transporter AMD23_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS08505 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS08510 PF12849 PBP superfamily domain AMD23_RS08515 PF12849 PBP superfamily domain AMD23_RS08530 PF00484 Carbonic anhydrase AMD23_RS08535 PF00916 Sulfate permease family AMD23_RS08535 PF01740 STAS domain AMD23_RS08540 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD23_RS08540 PF00633 Helix-hairpin-helix motif AMD23_RS08540 PF10576 Iron-sulfur binding domain of endonuclease III AMD23_RS08550 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS08555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD23_RS08555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD23_RS08560 PF00293 NUDIX domain AMD23_RS08565 PF00581 Rhodanese-like domain AMD23_RS08595 PF12848 ABC transporter AMD23_RS08595 PF00005 ABC transporter AMD23_RS08595 PF16326 ABC transporter C-terminal domain AMD23_RS08600 PF10672 S-adenosylmethionine-dependent methyltransferase AMD23_RS08600 PF02926 THUMP domain AMD23_RS08600 PF01170 Putative RNA methylase family UPF0020 AMD23_RS08605 PF01513 ATP-NAD kinase AMD23_RS08630 PF00929 Exonuclease AMD23_RS08630 PF08411 Exonuclease C-terminal AMD23_RS08635 PF01494 FAD binding domain AMD23_RS08640 PF00266 Aminotransferase class-V AMD23_RS08650 PF06052 3-hydroxyanthranilic acid dioxygenase AMD23_RS08655 PF00484 Carbonic anhydrase AMD23_RS08700 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS08700 PF00072 Response regulator receiver domain AMD23_RS08715 PF04299 Putative FMN-binding domain AMD23_RS08735 PF00152 tRNA synthetases class II (D, K and N) AMD23_RS08735 PF01336 OB-fold nucleic acid binding domain AMD23_RS08740 PF01521 Iron-sulphur cluster biosynthesis AMD23_RS08745 PF01250 Ribosomal protein S6 AMD23_RS08750 PF01084 Ribosomal protein S18 AMD23_RS08755 PF01281 Ribosomal protein L9, N-terminal domain AMD23_RS08755 PF03948 Ribosomal protein L9, C-terminal domain AMD23_RS08760 PF02463 RecF/RecN/SMC N terminal domain AMD23_RS08765 PF04354 ZipA, C-terminal FtsZ-binding domain AMD23_RS08775 PF00155 Aminotransferase class I and II AMD23_RS08780 PF12826 Helix-hairpin-helix motif AMD23_RS08780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD23_RS08780 PF03120 NAD-dependent DNA ligase OB-fold domain AMD23_RS08780 PF01653 NAD-dependent DNA ligase adenylation domain AMD23_RS08780 PF00533 BRCA1 C Terminus (BRCT) domain AMD23_RS08785 PF00152 tRNA synthetases class II (D, K and N) AMD23_RS08795 PF01008 Initiation factor 2 subunit family AMD23_RS08800 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD23_RS08800 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD23_RS08805 PF13360 PQQ-like domain AMD23_RS08815 PF17392 Urocanase C-terminal domain AMD23_RS08815 PF01175 Urocanase Rossmann-like domain AMD23_RS08815 PF17391 Urocanase N-terminal domain AMD23_RS08825 PF00221 Aromatic amino acid lyase AMD23_RS08830 PF07969 Amidohydrolase family AMD23_RS08845 PF00392 Bacterial regulatory proteins, gntR family AMD23_RS08845 PF07702 UTRA domain AMD23_RS08875 PF01794 Ferric reductase like transmembrane component AMD23_RS08880 PF00174 Oxidoreductase molybdopterin binding domain AMD23_RS08885 PF00266 Aminotransferase class-V AMD23_RS08890 PF01817 Chorismate mutase type II AMD23_RS08890 PF01842 ACT domain AMD23_RS08890 PF00800 Prephenate dehydratase AMD23_RS08895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD23_RS08905 PF03544 Gram-negative bacterial TonB protein C-terminal AMD23_RS08910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD23_RS08910 PF02403 Seryl-tRNA synthetase N-terminal domain AMD23_RS08915 PF02525 Flavodoxin-like fold AMD23_RS08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS08920 PF03466 LysR substrate binding domain AMD23_RS08935 PF00672 HAMP domain AMD23_RS08935 PF02203 Tar ligand binding domain homologue AMD23_RS08935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS08940 PF01494 FAD binding domain AMD23_RS08960 PF13188 PAS domain AMD23_RS08960 PF00072 Response regulator receiver domain AMD23_RS08960 PF08448 PAS fold AMD23_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS08960 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS08965 PF00672 HAMP domain AMD23_RS08965 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS08965 PF01627 Hpt domain AMD23_RS08965 PF00072 Response regulator receiver domain AMD23_RS08965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD23_RS08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS08970 PF06745 KaiC AMD23_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS08975 PF13426 PAS domain AMD23_RS08975 PF00072 Response regulator receiver domain AMD23_RS08985 PF03918 Cytochrome C biogenesis protein AMD23_RS08990 PF08534 Redoxin AMD23_RS08995 PF01578 Cytochrome C assembly protein AMD23_RS08995 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD23_RS09000 PF03100 CcmE AMD23_RS09010 PF01578 Cytochrome C assembly protein AMD23_RS09015 PF00082 Subtilase family AMD23_RS09025 PF04542 Sigma-70 region 2 AMD23_RS09025 PF08281 Sigma-70, region 4 AMD23_RS09040 PF00034 Cytochrome c AMD23_RS09055 PF05523 WxcM-like, C-terminal AMD23_RS09075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD23_RS09080 PF01943 Polysaccharide biosynthesis protein AMD23_RS09085 PF00535 Glycosyl transferase family 2 AMD23_RS09100 PF08241 Methyltransferase domain AMD23_RS09120 PF13579 Glycosyl transferase 4-like domain AMD23_RS09120 PF00534 Glycosyl transferases group 1 AMD23_RS09135 PF00005 ABC transporter AMD23_RS09140 PF00664 ABC transporter transmembrane region AMD23_RS09140 PF00005 ABC transporter AMD23_RS09145 PF07690 Major Facilitator Superfamily AMD23_RS09150 PF00296 Luciferase-like monooxygenase AMD23_RS09165 PF00571 CBS domain AMD23_RS09165 PF03471 Transporter associated domain AMD23_RS09165 PF01595 Cyclin M transmembrane N-terminal domain AMD23_RS09175 PF01384 Phosphate transporter family AMD23_RS09190 PF00204 DNA gyrase B AMD23_RS09190 PF01751 Toprim domain AMD23_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS09190 PF00986 DNA gyrase B subunit, carboxyl terminus AMD23_RS09200 PF00117 Glutamine amidotransferase class-I AMD23_RS09200 PF06418 CTP synthase N-terminus AMD23_RS09205 PF00793 DAHP synthetase I family AMD23_RS09215 PF03952 Enolase, N-terminal domain AMD23_RS09215 PF00113 Enolase, C-terminal TIM barrel domain AMD23_RS09220 PF04977 Septum formation initiator AMD23_RS09225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD23_RS09230 PF02542 YgbB family AMD23_RS09235 PF01142 tRNA pseudouridine synthase D (TruD) AMD23_RS09240 PF01713 Smr domain AMD23_RS09245 PF01975 Survival protein SurE AMD23_RS09255 PF09335 SNARE associated Golgi protein AMD23_RS09260 PF01476 LysM domain AMD23_RS09260 PF01551 Peptidase family M23 AMD23_RS09265 PF04430 Protein of unknown function (DUF498/DUF598) AMD23_RS09270 PF01985 CRS1 / YhbY (CRM) domain AMD23_RS09275 PF01728 FtsJ-like methyltransferase AMD23_RS09280 PF00004 ATPase family associated with various cellular activities (AAA) AMD23_RS09280 PF17862 AAA+ lid domain AMD23_RS09280 PF01434 Peptidase family M41 AMD23_RS09280 PF06480 FtsH Extracellular AMD23_RS09285 PF00809 Pterin binding enzyme AMD23_RS09295 PF17209 Hfq protein AMD23_RS09300 PF13167 GTP-binding GTPase N-terminal AMD23_RS09300 PF01926 50S ribosome-binding GTPase AMD23_RS09300 PF16360 GTP-binding GTPase Middle Region AMD23_RS09305 PF02464 Competence-damaged protein AMD23_RS09310 PF03109 ABC1 family AMD23_RS09315 PF01726 LexA DNA binding domain AMD23_RS09315 PF00717 Peptidase S24-like AMD23_RS09320 PF00154 recA bacterial DNA recombination protein AMD23_RS09325 PF02631 RecX family AMD23_RS09330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD23_RS09330 PF02272 DHHA1 domain AMD23_RS09330 PF01411 tRNA synthetases class II (A) AMD23_RS09335 PF02599 Global regulator protein family AMD23_RS09345 PF13426 PAS domain AMD23_RS09345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS09345 PF08447 PAS fold AMD23_RS09350 PF02678 Pirin AMD23_RS09350 PF17954 Quercetinase C-terminal cupin domain AMD23_RS09360 PF03466 LysR substrate binding domain AMD23_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS09385 PF02581 Thiamine monophosphate synthase AMD23_RS09385 PF08543 Phosphomethylpyrimidine kinase AMD23_RS09400 PF13638 PIN domain AMD23_RS09400 PF02562 PhoH-like protein AMD23_RS09405 PF00578 AhpC/TSA family AMD23_RS09420 PF00701 Dihydrodipicolinate synthetase family AMD23_RS09430 PF00037 4Fe-4S binding domain AMD23_RS09430 PF11953 Domain of unknown function (DUF3470) AMD23_RS09435 PF05035 2-keto-3-deoxy-galactonokinase AMD23_RS09440 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD23_RS09445 PF13378 Enolase C-terminal domain-like AMD23_RS09445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD23_RS09450 PF01081 KDPG and KHG aldolase AMD23_RS09460 PF03466 LysR substrate binding domain AMD23_RS09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS09475 PF00942 Cellulose binding domain AMD23_RS09475 PF03442 Carbohydrate binding domain X2 AMD23_RS09490 PF01055 Glycosyl hydrolases family 31 AMD23_RS09490 PF16338 Domain of unknown function (DUF4968) AMD23_RS09490 PF17137 Domain of unknown function (DUF5110) AMD23_RS09500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD23_RS09500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD23_RS09510 PF00083 Sugar (and other) transporter AMD23_RS09520 PF01520 N-acetylmuramoyl-L-alanine amidase AMD23_RS09525 PF02649 Type I GTP cyclohydrolase folE2 AMD23_RS09535 PF01743 Poly A polymerase head domain AMD23_RS09535 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD23_RS09535 PF12626 Polymerase A arginine-rich C-terminus AMD23_RS09540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD23_RS09545 PF02548 Ketopantoate hydroxymethyltransferase AMD23_RS09550 PF02569 Pantoate-beta-alanine ligase AMD23_RS09555 PF02261 Aspartate decarboxylase AMD23_RS09560 PF00342 Phosphoglucose isomerase AMD23_RS09580 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD23_RS09580 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD23_RS09580 PF14310 Fibronectin type III-like domain AMD23_RS09585 PF00474 Sodium:solute symporter family AMD23_RS09590 PF01590 GAF domain AMD23_RS09590 PF00563 EAL domain AMD23_RS09590 PF00360 Phytochrome region AMD23_RS09590 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS09595 PF00150 Cellulase (glycosyl hydrolase family 5) AMD23_RS09595 PF02013 Cellulose or protein binding domain AMD23_RS09600 PF00072 Response regulator receiver domain AMD23_RS09610 PF04551 GcpE protein AMD23_RS09615 PF01569 PAP2 superfamily AMD23_RS09620 PF07690 Major Facilitator Superfamily AMD23_RS09625 PF01177 Asp/Glu/Hydantoin racemase AMD23_RS09630 PF00892 EamA-like transporter family AMD23_RS09635 PF01565 FAD binding domain AMD23_RS09635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD23_RS09640 PF01180 Dihydroorotate dehydrogenase AMD23_RS09655 PF00171 Aldehyde dehydrogenase family AMD23_RS09670 PF00535 Glycosyl transferase family 2 AMD23_RS09675 PF14883 Hypothetical glycosyl hydrolase family 13 AMD23_RS09675 PF01522 Polysaccharide deacetylase AMD23_RS09685 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD23_RS09685 PF08479 POTRA domain, ShlB-type AMD23_RS09685 PF17287 POTRA domain AMD23_RS09690 PF04829 Pre-toxin domain with VENN motif AMD23_RS09690 PF13332 Hemagglutinin repeat AMD23_RS09690 PF05594 Haemagluttinin repeat AMD23_RS09695 PF13332 Hemagglutinin repeat AMD23_RS09695 PF04829 Pre-toxin domain with VENN motif AMD23_RS09695 PF05594 Haemagluttinin repeat AMD23_RS09700 PF05594 Haemagluttinin repeat AMD23_RS09700 PF13332 Hemagglutinin repeat AMD23_RS09700 PF05860 haemagglutination activity domain AMD23_RS09700 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain AMD23_RS09700 PF13018 Extended Signal Peptide of Type V secretion system AMD23_RS09710 PF01842 ACT domain AMD23_RS09710 PF00696 Amino acid kinase family AMD23_RS09710 PF00742 Homoserine dehydrogenase AMD23_RS09710 PF03447 Homoserine dehydrogenase, NAD binding domain AMD23_RS09710 PF13840 ACT domain AMD23_RS09715 PF00288 GHMP kinases N terminal domain AMD23_RS09715 PF08544 GHMP kinases C terminal AMD23_RS09725 PF00291 Pyridoxal-phosphate dependent enzyme AMD23_RS09725 PF14821 Threonine synthase N terminus AMD23_RS09735 PF13545 Crp-like helix-turn-helix domain AMD23_RS09735 PF00027 Cyclic nucleotide-binding domain AMD23_RS09740 PF13393 Histidyl-tRNA synthetase AMD23_RS09740 PF03129 Anticodon binding domain AMD23_RS09750 PF01634 ATP phosphoribosyltransferase AMD23_RS09750 PF08029 HisG, C-terminal domain AMD23_RS09755 PF00815 Histidinol dehydrogenase AMD23_RS09760 PF00155 Aminotransferase class I and II AMD23_RS09765 PF00475 Imidazoleglycerol-phosphate dehydratase AMD23_RS09770 PF00117 Glutamine amidotransferase class-I AMD23_RS09775 PF00977 Histidine biosynthesis protein AMD23_RS09780 PF00977 Histidine biosynthesis protein AMD23_RS09785 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD23_RS09785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD23_RS09805 PF03079 ARD/ARD' family AMD23_RS09810 PF00596 Class II Aldolase and Adducin N-terminal domain AMD23_RS09815 PF13520 Amino acid permease AMD23_RS09820 PF13520 Amino acid permease AMD23_RS09830 PF01842 ACT domain AMD23_RS09830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD23_RS09830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD23_RS09835 PF02913 FAD linked oxidases, C-terminal domain AMD23_RS09835 PF01565 FAD binding domain AMD23_RS09855 PF09285 Elongation factor P, C-terminal AMD23_RS09855 PF08207 Elongation factor P (EF-P) KOW-like domain AMD23_RS09855 PF01132 Elongation factor P (EF-P) OB domain AMD23_RS09860 PF00106 short chain dehydrogenase AMD23_RS09865 PF00682 HMGL-like AMD23_RS09875 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS09885 PF07664 Ferrous iron transport protein B C terminus AMD23_RS09885 PF02421 Ferrous iron transport protein B AMD23_RS09885 PF07670 Nucleoside recognition AMD23_RS09900 PF00155 Aminotransferase class I and II AMD23_RS09905 PF03475 3-alpha domain AMD23_RS09905 PF03473 MOSC domain AMD23_RS09910 PF01113 Dihydrodipicolinate reductase, N-terminus AMD23_RS09910 PF05173 Dihydrodipicolinate reductase, C-terminus AMD23_RS09915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD23_RS09915 PF00117 Glutamine amidotransferase class-I AMD23_RS09925 PF02142 MGS-like domain AMD23_RS09925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD23_RS09925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD23_RS09930 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD23_RS09930 PF03449 Transcription elongation factor, N-terminal AMD23_RS09940 PF01368 DHH family AMD23_RS09940 PF17768 RecJ OB domain AMD23_RS09940 PF02272 DHHA1 domain AMD23_RS09985 PF04397 LytTr DNA-binding domain AMD23_RS09985 PF00072 Response regulator receiver domain AMD23_RS09990 PF00472 RF-1 domain AMD23_RS09990 PF03462 PCRF domain AMD23_RS09995 PF01336 OB-fold nucleic acid binding domain AMD23_RS09995 PF00152 tRNA synthetases class II (D, K and N) AMD23_RS10000 PF00072 Response regulator receiver domain AMD23_RS10005 PF01627 Hpt domain AMD23_RS10005 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS10005 PF00072 Response regulator receiver domain AMD23_RS10005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS10010 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS10015 PF00501 AMP-binding enzyme AMD23_RS10015 PF13193 AMP-binding enzyme C-terminal domain AMD23_RS10025 PF00694 Aconitase C-terminal domain AMD23_RS10025 PF00330 Aconitase family (aconitate hydratase) AMD23_RS10040 PF06434 Aconitate hydratase 2 N-terminus AMD23_RS10040 PF11791 Aconitate B N-terminal domain AMD23_RS10040 PF00330 Aconitase family (aconitate hydratase) AMD23_RS10045 PF00561 alpha/beta hydrolase fold AMD23_RS10050 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS10050 PF00563 EAL domain AMD23_RS10050 PF03707 Bacterial signalling protein N terminal repeat AMD23_RS10055 PF00072 Response regulator receiver domain AMD23_RS10055 PF01339 CheB methylesterase AMD23_RS10060 PF03975 CheD chemotactic sensory transduction AMD23_RS10065 PF03705 CheR methyltransferase, all-alpha domain AMD23_RS10065 PF01739 CheR methyltransferase, SAM binding domain AMD23_RS10070 PF02203 Tar ligand binding domain homologue AMD23_RS10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10070 PF00672 HAMP domain AMD23_RS10075 PF00672 HAMP domain AMD23_RS10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10075 PF02203 Tar ligand binding domain homologue AMD23_RS10080 PF00672 HAMP domain AMD23_RS10080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10080 PF02203 Tar ligand binding domain homologue AMD23_RS10090 PF00672 HAMP domain AMD23_RS10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10090 PF02203 Tar ligand binding domain homologue AMD23_RS10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10095 PF02203 Tar ligand binding domain homologue AMD23_RS10095 PF00672 HAMP domain AMD23_RS10100 PF00672 HAMP domain AMD23_RS10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10105 PF00672 HAMP domain AMD23_RS10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10105 PF02203 Tar ligand binding domain homologue AMD23_RS10120 PF02203 Tar ligand binding domain homologue AMD23_RS10120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10120 PF00672 HAMP domain AMD23_RS10125 PF08269 Cache domain AMD23_RS10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10135 PF00672 HAMP domain AMD23_RS10135 PF02203 Tar ligand binding domain homologue AMD23_RS10140 PF09078 CheY binding AMD23_RS10140 PF02895 Signal transducing histidine kinase, homodimeric domain AMD23_RS10140 PF01627 Hpt domain AMD23_RS10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS10140 PF01584 CheW-like domain AMD23_RS10145 PF00072 Response regulator receiver domain AMD23_RS10155 PF01584 CheW-like domain AMD23_RS10160 PF13614 AAA domain AMD23_RS10165 PF00691 OmpA family AMD23_RS10165 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD23_RS10170 PF01618 MotA/TolQ/ExbB proton channel family AMD23_RS10185 PF00069 Protein kinase domain AMD23_RS10185 PF03793 PASTA domain AMD23_RS10255 PF13186 Iron-sulfur cluster-binding domain AMD23_RS10255 PF04055 Radical SAM superfamily AMD23_RS10270 PF01584 CheW-like domain AMD23_RS10270 PF02895 Signal transducing histidine kinase, homodimeric domain AMD23_RS10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS10270 PF01627 Hpt domain AMD23_RS10270 PF00072 Response regulator receiver domain AMD23_RS10275 PF04344 Chemotaxis phosphatase, CheZ AMD23_RS10280 PF00072 Response regulator receiver domain AMD23_RS10285 PF04539 Sigma-70 region 3 AMD23_RS10285 PF04542 Sigma-70 region 2 AMD23_RS10285 PF04545 Sigma-70, region 4 AMD23_RS10290 PF10609 NUBPL iron-transfer P-loop NTPase AMD23_RS10295 PF00448 SRP54-type protein, GTPase domain AMD23_RS10300 PF00771 FHIPEP family AMD23_RS10305 PF01312 FlhB HrpN YscU SpaS Family AMD23_RS10310 PF03707 Bacterial signalling protein N terminal repeat AMD23_RS10310 PF00563 EAL domain AMD23_RS10310 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS10315 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS10325 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS10330 PF01311 Bacterial export proteins, family 1 AMD23_RS10335 PF01313 Bacterial export proteins, family 3 AMD23_RS10340 PF00813 FliP family AMD23_RS10345 PF04347 Flagellar biosynthesis protein, FliO AMD23_RS10350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD23_RS10355 PF02154 Flagellar motor switch protein FliM AMD23_RS10355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD23_RS10375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD23_RS10375 PF18269 T3SS EscN ATPase C-terminal domain AMD23_RS10385 PF14842 FliG N-terminal domain AMD23_RS10385 PF01706 FliG C-terminal domain AMD23_RS10385 PF14841 FliG middle domain AMD23_RS10390 PF01514 Secretory protein of YscJ/FliF family AMD23_RS10390 PF08345 Flagellar M-ring protein C-terminal AMD23_RS10395 PF02049 Flagellar hook-basal body complex protein FliE AMD23_RS10400 PF00534 Glycosyl transferases group 1 AMD23_RS10400 PF00535 Glycosyl transferase family 2 AMD23_RS10435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD23_RS10435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD23_RS10445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD23_RS10450 PF06490 Flagellar regulatory protein FleQ AMD23_RS10450 PF02954 Bacterial regulatory protein, Fis family AMD23_RS10450 PF00158 Sigma-54 interaction domain AMD23_RS10455 PF01339 CheB methylesterase AMD23_RS10455 PF00072 Response regulator receiver domain AMD23_RS10460 PF04552 Sigma-54, DNA binding domain AMD23_RS10460 PF04963 Sigma-54 factor, core binding domain AMD23_RS10460 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD23_RS10465 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS10465 PF00072 Response regulator receiver domain AMD23_RS10480 PF02561 Flagellar protein FliS AMD23_RS10485 PF02465 Flagellar hook-associated protein 2 N-terminus AMD23_RS10485 PF07195 Flagellar hook-associated protein 2 C-terminus AMD23_RS10485 PF07196 Flagellin hook IN motif AMD23_RS10490 PF00669 Bacterial flagellin N-terminal helical region AMD23_RS10490 PF00700 Bacterial flagellin C-terminal helical region AMD23_RS10495 PF00669 Bacterial flagellin N-terminal helical region AMD23_RS10495 PF00700 Bacterial flagellin C-terminal helical region AMD23_RS10500 PF07196 Flagellin hook IN motif AMD23_RS10500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD23_RS10505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD23_RS10505 PF10135 Rod binding protein AMD23_RS10510 PF02119 Flagellar P-ring protein AMD23_RS10515 PF02107 Flagellar L-ring protein AMD23_RS10520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD23_RS10520 PF00460 Flagella basal body rod protein AMD23_RS10525 PF00460 Flagella basal body rod protein AMD23_RS10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD23_RS10530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD23_RS10530 PF00460 Flagella basal body rod protein AMD23_RS10530 PF07559 Flagellar basal body protein FlaE AMD23_RS10535 PF03963 Flagellar hook capping protein - N-terminal region AMD23_RS10540 PF00460 Flagella basal body rod protein AMD23_RS10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD23_RS10550 PF01584 CheW-like domain AMD23_RS10550 PF00072 Response regulator receiver domain AMD23_RS10570 PF13426 PAS domain AMD23_RS10570 PF13188 PAS domain AMD23_RS10570 PF00989 PAS fold AMD23_RS10570 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS10575 PF03707 Bacterial signalling protein N terminal repeat AMD23_RS10575 PF00563 EAL domain AMD23_RS10575 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS10580 PF07730 Histidine kinase AMD23_RS10585 PF03707 Bacterial signalling protein N terminal repeat AMD23_RS10585 PF00563 EAL domain AMD23_RS10585 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS10595 PF12729 Four helix bundle sensory module for signal transduction AMD23_RS10595 PF00672 HAMP domain AMD23_RS10600 PF04356 Protein of unknown function (DUF489) AMD23_RS10610 PF00293 NUDIX domain AMD23_RS10615 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD23_RS10620 PF02861 Clp amino terminal domain, pathogenicity island component AMD23_RS10620 PF17871 AAA lid domain AMD23_RS10620 PF00004 ATPase family associated with various cellular activities (AAA) AMD23_RS10620 PF07724 AAA domain (Cdc48 subfamily) AMD23_RS10620 PF10431 C-terminal, D2-small domain, of ClpB protein AMD23_RS10625 PF01176 Translation initiation factor 1A / IF-1 AMD23_RS10630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD23_RS10640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS10645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMD23_RS10645 PF01580 FtsK/SpoIIIE family AMD23_RS10645 PF17854 FtsK alpha domain AMD23_RS10645 PF09397 Ftsk gamma domain AMD23_RS10655 PF03548 Outer membrane lipoprotein carrier protein LolA AMD23_RS10665 PF16193 AAA C-terminal domain AMD23_RS10665 PF12002 MgsA AAA+ ATPase C terminal AMD23_RS10665 PF00004 ATPase family associated with various cellular activities (AAA) AMD23_RS10670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMD23_RS10680 PF02803 Thiolase, C-terminal domain AMD23_RS10680 PF00108 Thiolase, N-terminal domain AMD23_RS10685 PF00378 Enoyl-CoA hydratase/isomerase AMD23_RS10685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD23_RS10685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD23_RS10695 PF00334 Nucleoside diphosphate kinase AMD23_RS10700 PF04055 Radical SAM superfamily AMD23_RS10710 PF13464 Domain of unknown function (DUF4115) AMD23_RS10720 PF01011 PQQ enzyme repeat AMD23_RS10720 PF13360 PQQ-like domain AMD23_RS10725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD23_RS10725 PF01926 50S ribosome-binding GTPase AMD23_RS10730 PF03453 MoeA N-terminal region (domain I and II) AMD23_RS10730 PF03454 MoeA C-terminal region (domain IV) AMD23_RS10730 PF00994 Probable molybdopterin binding domain AMD23_RS10735 PF00899 ThiF family AMD23_RS10760 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS10760 PF13823 Alcohol dehydrogenase GroES-associated AMD23_RS10760 PF00107 Zinc-binding dehydrogenase AMD23_RS10770 PF03372 Endonuclease/Exonuclease/phosphatase family AMD23_RS10780 PF03454 MoeA C-terminal region (domain IV) AMD23_RS10780 PF00994 Probable molybdopterin binding domain AMD23_RS10780 PF03453 MoeA N-terminal region (domain I and II) AMD23_RS10785 PF12804 MobA-like NTP transferase domain AMD23_RS10795 PF00561 alpha/beta hydrolase fold AMD23_RS10800 PF01566 Natural resistance-associated macrophage protein AMD23_RS10805 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD23_RS10805 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD23_RS10810 PF14437 MafB19-like deaminase AMD23_RS10815 PF00929 Exonuclease AMD23_RS10820 PF00924 Mechanosensitive ion channel AMD23_RS10820 PF05552 Conserved TM helix AMD23_RS10825 PF00391 PEP-utilising enzyme, mobile domain AMD23_RS10825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD23_RS10825 PF02896 PEP-utilising enzyme, TIM barrel domain AMD23_RS10830 PF03618 Kinase/pyrophosphorylase AMD23_RS10850 PF01066 CDP-alcohol phosphatidyltransferase AMD23_RS10860 PF00561 alpha/beta hydrolase fold AMD23_RS10875 PF01266 FAD dependent oxidoreductase AMD23_RS10875 PF00355 Rieske [2Fe-2S] domain AMD23_RS10885 PF17674 HHH domain AMD23_RS10885 PF00575 S1 RNA binding domain AMD23_RS10885 PF16921 Tex protein YqgF-like domain AMD23_RS10885 PF09371 Tex-like protein N-terminal domain AMD23_RS10890 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS10890 PF09308 LuxQ, periplasmic AMD23_RS10890 PF00072 Response regulator receiver domain AMD23_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS10930 PF00034 Cytochrome c AMD23_RS10940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS10945 PF00873 AcrB/AcrD/AcrF family AMD23_RS10950 PF00873 AcrB/AcrD/AcrF family AMD23_RS10955 PF01081 KDPG and KHG aldolase AMD23_RS10960 PF00920 Dehydratase family AMD23_RS10965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD23_RS10970 PF02685 Glucokinase AMD23_RS10975 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD23_RS10975 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD23_RS10980 PF17912 MalK OB fold domain AMD23_RS10980 PF00005 ABC transporter AMD23_RS10990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD23_RS10995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD23_RS11000 PF02910 Fumarate reductase flavoprotein C-term AMD23_RS11000 PF00890 FAD binding domain AMD23_RS11010 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD23_RS11015 PF03937 Flavinator of succinate dehydrogenase AMD23_RS11025 PF02687 FtsX-like permease family AMD23_RS11025 PF12704 MacB-like periplasmic core domain AMD23_RS11030 PF00005 ABC transporter AMD23_RS11040 PF03772 Competence protein AMD23_RS11040 PF00753 Metallo-beta-lactamase superfamily AMD23_RS11045 PF01618 MotA/TolQ/ExbB proton channel family AMD23_RS11050 PF02472 Biopolymer transport protein ExbD/TolR AMD23_RS11055 PF00664 ABC transporter transmembrane region AMD23_RS11055 PF00005 ABC transporter AMD23_RS11060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD23_RS11065 PF02348 Cytidylyltransferase AMD23_RS11070 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD23_RS11080 PF08459 UvrC Helix-hairpin-helix N-terminal AMD23_RS11080 PF02151 UvrB/uvrC motif AMD23_RS11080 PF01541 GIY-YIG catalytic domain AMD23_RS11085 PF01066 CDP-alcohol phosphatidyltransferase AMD23_RS11105 PF13193 AMP-binding enzyme C-terminal domain AMD23_RS11105 PF00668 Condensation domain AMD23_RS11105 PF00550 Phosphopantetheine attachment site AMD23_RS11105 PF00501 AMP-binding enzyme AMD23_RS11110 PF00975 Thioesterase domain AMD23_RS11110 PF00668 Condensation domain AMD23_RS11110 PF00501 AMP-binding enzyme AMD23_RS11110 PF13193 AMP-binding enzyme C-terminal domain AMD23_RS11110 PF00550 Phosphopantetheine attachment site AMD23_RS11120 PF01527 Transposase AMD23_RS11125 PF13333 Integrase core domain AMD23_RS11125 PF13276 HTH-like domain AMD23_RS11125 PF00665 Integrase core domain AMD23_RS11135 PF00589 Phage integrase family AMD23_RS11145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD23_RS11145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD23_RS11145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD23_RS11155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD23_RS11165 PF00581 Rhodanese-like domain AMD23_RS11165 PF17773 UPF0176 acylphosphatase like domain AMD23_RS11170 PF00072 Response regulator receiver domain AMD23_RS11170 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS11175 PF12111 Polyribonucleotide phosphorylase C terminal AMD23_RS11175 PF00575 S1 RNA binding domain AMD23_RS11175 PF10150 Ribonuclease E/G family AMD23_RS11180 PF01479 S4 domain AMD23_RS11180 PF00849 RNA pseudouridylate synthase AMD23_RS11185 PF11737 Protein of unknown function (DUF3300) AMD23_RS11190 PF02535 ZIP Zinc transporter AMD23_RS11200 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD23_RS11205 PF01106 NifU-like domain AMD23_RS11250 PF08241 Methyltransferase domain AMD23_RS11250 PF12697 Alpha/beta hydrolase family AMD23_RS11260 PF00106 short chain dehydrogenase AMD23_RS11290 PF01494 FAD binding domain AMD23_RS11295 PF09335 SNARE associated Golgi protein AMD23_RS11305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD23_RS11315 PF07995 Glucose / Sorbosone dehydrogenase AMD23_RS11325 PF00144 Beta-lactamase AMD23_RS11330 PF04397 LytTr DNA-binding domain AMD23_RS11330 PF00072 Response regulator receiver domain AMD23_RS11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS11335 PF07694 5TMR of 5TMR-LYT AMD23_RS11335 PF06580 Histidine kinase AMD23_RS11350 PF00082 Subtilase family AMD23_RS11350 PF03797 Autotransporter beta-domain AMD23_RS11355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS11360 PF00873 AcrB/AcrD/AcrF family AMD23_RS11370 PF08448 PAS fold AMD23_RS11370 PF13426 PAS domain AMD23_RS11370 PF00072 Response regulator receiver domain AMD23_RS11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS11370 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS11375 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS11375 PF00072 Response regulator receiver domain AMD23_RS11380 PF12951 Passenger-associated-transport-repeat AMD23_RS11380 PF12951 Passenger-associated-transport-repeat AMD23_RS11385 PF08448 PAS fold AMD23_RS11385 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS11385 PF08447 PAS fold AMD23_RS11385 PF00563 EAL domain AMD23_RS11400 PF05974 Domain of unknown function (DUF892) AMD23_RS11415 PF10414 Sirohaem synthase dimerisation region AMD23_RS11415 PF14824 Sirohaem biosynthesis protein central AMD23_RS11415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD23_RS11430 PF05977 Transmembrane secretion effector AMD23_RS11440 PF07969 Amidohydrolase family AMD23_RS11450 PF00857 Isochorismatase family AMD23_RS11465 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS11465 PF00072 Response regulator receiver domain AMD23_RS11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS11485 PF03466 LysR substrate binding domain AMD23_RS11490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD23_RS11490 PF00361 Proton-conducting membrane transporter AMD23_RS11490 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AMD23_RS11495 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AMD23_RS11510 PF01381 Helix-turn-helix AMD23_RS11515 PF05284 Protein of unknown function (DUF736) AMD23_RS11520 PF04002 RadC-like JAB domain AMD23_RS11545 PF00589 Phage integrase family AMD23_RS11545 PF13356 Arm DNA-binding domain AMD23_RS11560 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS11560 PF00593 TonB dependent receptor AMD23_RS11575 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMD23_RS11600 PF00593 TonB dependent receptor AMD23_RS11600 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS11610 PF10947 Protein of unknown function (DUF2628) AMD23_RS11625 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AMD23_RS11625 PF00722 Glycosyl hydrolases family 16 AMD23_RS11645 PF03412 Peptidase C39 family AMD23_RS11645 PF00664 ABC transporter transmembrane region AMD23_RS11645 PF00005 ABC transporter AMD23_RS11655 PF13614 AAA domain AMD23_RS11695 PF01131 DNA topoisomerase AMD23_RS11695 PF01751 Toprim domain AMD23_RS11700 PF00145 C-5 cytosine-specific DNA methylase AMD23_RS11750 PF17761 DUF1016 N-terminal domain AMD23_RS11750 PF06250 YhcG PDDEXK nuclease domain AMD23_RS11770 PF00892 EamA-like transporter family AMD23_RS11775 PF00892 EamA-like transporter family AMD23_RS11785 PF02525 Flavodoxin-like fold AMD23_RS11790 PF02798 Glutathione S-transferase, N-terminal domain AMD23_RS11790 PF00043 Glutathione S-transferase, C-terminal domain AMD23_RS11795 PF05544 Proline racemase AMD23_RS11800 PF03358 NADPH-dependent FMN reductase AMD23_RS11810 PF07690 Major Facilitator Superfamily AMD23_RS11815 PF02311 AraC-like ligand binding domain AMD23_RS11815 PF12833 Helix-turn-helix domain AMD23_RS11965 PF12462 DNA helicase IV / RNA helicase N terminal AMD23_RS11965 PF00580 UvrD/REP helicase N-terminal domain AMD23_RS11965 PF13361 UvrD-like helicase C-terminal domain AMD23_RS12040 PF03466 LysR substrate binding domain AMD23_RS12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS12045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD23_RS12045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD23_RS12050 PF03401 Tripartite tricarboxylate transporter family receptor AMD23_RS12065 PF04002 RadC-like JAB domain AMD23_RS12100 PF00589 Phage integrase family AMD23_RS12100 PF13356 Arm DNA-binding domain AMD23_RS12105 PF02540 NAD synthase AMD23_RS12105 PF00117 Glutamine amidotransferase class-I AMD23_RS12105 PF00958 GMP synthase C terminal domain AMD23_RS12110 PF00478 IMP dehydrogenase / GMP reductase domain AMD23_RS12110 PF00571 CBS domain AMD23_RS12115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD23_RS12115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD23_RS12125 PF00999 Sodium/hydrogen exchanger family AMD23_RS12125 PF02254 TrkA-N domain AMD23_RS12130 PF00483 Nucleotidyl transferase AMD23_RS12135 PF02719 Polysaccharide biosynthesis protein AMD23_RS12140 PF00953 Glycosyl transferase family 4 AMD23_RS12145 PF18073 Rubredoxin metal binding domain AMD23_RS12155 PF00216 Bacterial DNA-binding protein AMD23_RS12160 PF00575 S1 RNA binding domain AMD23_RS12165 PF02224 Cytidylate kinase AMD23_RS12170 PF00444 Ribosomal protein L36 AMD23_RS12180 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD23_RS12185 PF00795 Carbon-nitrogen hydrolase AMD23_RS12210 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS12235 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS12245 PF03795 YCII-related domain AMD23_RS12250 PF02616 Segregation and condensation protein ScpA AMD23_RS12255 PF04079 Segregation and condensation complex subunit ScpB AMD23_RS12260 PF00849 RNA pseudouridylate synthase AMD23_RS12260 PF01479 S4 domain AMD23_RS12275 PF00795 Carbon-nitrogen hydrolase AMD23_RS12280 PF00155 Aminotransferase class I and II AMD23_RS12285 PF00005 ABC transporter AMD23_RS12290 PF03379 CcmB protein AMD23_RS12295 PF01578 Cytochrome C assembly protein AMD23_RS12305 PF03100 CcmE AMD23_RS12310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD23_RS12310 PF01578 Cytochrome C assembly protein AMD23_RS12315 PF08534 Redoxin AMD23_RS12320 PF03918 Cytochrome C biogenesis protein AMD23_RS12330 PF00561 alpha/beta hydrolase fold AMD23_RS12335 PF00313 'Cold-shock' DNA-binding domain AMD23_RS12340 PF00664 ABC transporter transmembrane region AMD23_RS12340 PF00005 ABC transporter AMD23_RS12345 PF00664 ABC transporter transmembrane region AMD23_RS12345 PF00005 ABC transporter AMD23_RS12350 PF01654 Cytochrome bd terminal oxidase subunit I AMD23_RS12355 PF02322 Cytochrome bd terminal oxidase subunit II AMD23_RS12375 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD23_RS12375 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD23_RS12380 PF00171 Aldehyde dehydrogenase family AMD23_RS12385 PF00696 Amino acid kinase family AMD23_RS12385 PF01472 PUA domain AMD23_RS12395 PF00206 Lyase AMD23_RS12400 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD23_RS12410 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AMD23_RS12410 PF00696 Amino acid kinase family AMD23_RS12415 PF07687 Peptidase dimerisation domain AMD23_RS12415 PF01546 Peptidase family M20/M25/M40 AMD23_RS12425 PF00764 Arginosuccinate synthase AMD23_RS12430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD23_RS12430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD23_RS12440 PF01406 tRNA synthetases class I (C) catalytic domain AMD23_RS12440 PF09190 DALR domain AMD23_RS12445 PF02657 Fe-S metabolism associated domain AMD23_RS12455 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD23_RS12465 PF01809 Putative membrane protein insertion efficiency factor AMD23_RS12470 PF01979 Amidohydrolase family AMD23_RS12475 PF08460 Bacterial SH3 domain AMD23_RS12475 PF01551 Peptidase family M23 AMD23_RS12490 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD23_RS12495 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD23_RS12505 PF00753 Metallo-beta-lactamase superfamily AMD23_RS12525 PF01527 Transposase AMD23_RS12530 PF00295 Glycosyl hydrolases family 28 AMD23_RS12540 PF13419 Haloacid dehalogenase-like hydrolase AMD23_RS12550 PF01979 Amidohydrolase family AMD23_RS12560 PF09285 Elongation factor P, C-terminal AMD23_RS12560 PF08207 Elongation factor P (EF-P) KOW-like domain AMD23_RS12560 PF01132 Elongation factor P (EF-P) OB domain AMD23_RS12565 PF04055 Radical SAM superfamily AMD23_RS12570 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS12570 PF03707 Bacterial signalling protein N terminal repeat AMD23_RS12570 PF13188 PAS domain AMD23_RS12570 PF00563 EAL domain AMD23_RS12580 PF00588 SpoU rRNA Methylase family AMD23_RS12585 PF00459 Inositol monophosphatase family AMD23_RS12590 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD23_RS12590 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD23_RS12595 PF00545 ribonuclease AMD23_RS12605 PF12848 ABC transporter AMD23_RS12605 PF16326 ABC transporter C-terminal domain AMD23_RS12605 PF00005 ABC transporter AMD23_RS12610 PF00270 DEAD/DEAH box helicase AMD23_RS12610 PF03880 DbpA RNA binding domain AMD23_RS12610 PF00271 Helicase conserved C-terminal domain AMD23_RS12615 PF00156 Phosphoribosyl transferase domain AMD23_RS12620 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMD23_RS12625 PF00135 Carboxylesterase family AMD23_RS12630 PF14497 Glutathione S-transferase, C-terminal domain AMD23_RS12630 PF02798 Glutathione S-transferase, N-terminal domain AMD23_RS12635 PF00313 'Cold-shock' DNA-binding domain AMD23_RS12640 PF07152 YaeQ protein AMD23_RS12650 PF00072 Response regulator receiver domain AMD23_RS12650 PF00563 EAL domain AMD23_RS12650 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS12655 PF01435 Peptidase family M48 AMD23_RS12660 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD23_RS12665 PF00106 short chain dehydrogenase AMD23_RS12670 PF07879 PHB/PHA accumulation regulator DNA-binding domain AMD23_RS12670 PF05233 PHB accumulation regulatory domain AMD23_RS12685 PF08676 MutL C terminal dimerisation domain AMD23_RS12685 PF01119 DNA mismatch repair protein, C-terminal domain AMD23_RS12690 PF11741 AMIN domain AMD23_RS12690 PF01520 N-acetylmuramoyl-L-alanine amidase AMD23_RS12695 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMD23_RS12700 PF01256 Carbohydrate kinase AMD23_RS12700 PF03853 YjeF-related protein N-terminus AMD23_RS12705 PF08331 Domain of unknown function (DUF1730) AMD23_RS12710 PF02601 Exonuclease VII, large subunit AMD23_RS12710 PF13742 OB-fold nucleic acid binding domain AMD23_RS12720 PF03781 Sulfatase-modifying factor enzyme 1 AMD23_RS12725 PF00570 HRDC domain AMD23_RS12725 PF01612 3'-5' exonuclease AMD23_RS12730 PF01068 ATP dependent DNA ligase domain AMD23_RS12730 PF04679 ATP dependent DNA ligase C terminal region AMD23_RS12730 PF13298 DNA polymerase Ligase (LigD) AMD23_RS12750 PF00589 Phage integrase family AMD23_RS12775 PF05598 Transposase domain (DUF772) AMD23_RS12785 PF01527 Transposase AMD23_RS12805 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD23_RS12805 PF01619 Proline dehydrogenase AMD23_RS12805 PF00171 Aldehyde dehydrogenase family AMD23_RS12805 PF14850 DNA-binding domain of Proline dehydrogenase AMD23_RS12815 PF01527 Transposase AMD23_RS12820 PF13276 HTH-like domain AMD23_RS12820 PF00665 Integrase core domain AMD23_RS12820 PF13333 Integrase core domain AMD23_RS12825 PF00239 Resolvase, N terminal domain AMD23_RS12825 PF02796 Helix-turn-helix domain of resolvase AMD23_RS12840 PF02384 N-6 DNA Methylase AMD23_RS12845 PF09572 XamI restriction endonuclease AMD23_RS12900 PF01584 CheW-like domain AMD23_RS12905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS12905 PF00672 HAMP domain AMD23_RS12905 PF02743 Cache domain AMD23_RS12910 PF02245 Methylpurine-DNA glycosylase (MPG) AMD23_RS12915 PF00270 DEAD/DEAH box helicase AMD23_RS12915 PF08494 DEAD/H associated AMD23_RS12915 PF00271 Helicase conserved C-terminal domain AMD23_RS12930 PF04386 Stringent starvation protein B AMD23_RS12935 PF02798 Glutathione S-transferase, N-terminal domain AMD23_RS12935 PF00043 Glutathione S-transferase, C-terminal domain AMD23_RS12940 PF02167 Cytochrome C1 family AMD23_RS12945 PF00032 Cytochrome b(C-terminal)/b6/petD AMD23_RS12945 PF00033 Cytochrome b/b6/petB AMD23_RS12950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD23_RS12950 PF00355 Rieske [2Fe-2S] domain AMD23_RS12955 PF01464 Transglycosylase SLT domain AMD23_RS12970 PF01938 TRAM domain AMD23_RS12970 PF04055 Radical SAM superfamily AMD23_RS12970 PF00919 Uncharacterized protein family UPF0004 AMD23_RS12975 PF02562 PhoH-like protein AMD23_RS12985 PF02130 Uncharacterized protein family UPF0054 AMD23_RS12995 PF00571 CBS domain AMD23_RS12995 PF03471 Transporter associated domain AMD23_RS13010 PF00171 Aldehyde dehydrogenase family AMD23_RS13020 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS13030 PF08402 TOBE domain AMD23_RS13030 PF00005 ABC transporter AMD23_RS13035 PF02321 Outer membrane efflux protein AMD23_RS13040 PF07690 Major Facilitator Superfamily AMD23_RS13045 PF13533 Biotin-lipoyl like AMD23_RS13050 PF13416 Bacterial extracellular solute-binding protein AMD23_RS13055 PF00202 Aminotransferase class-III AMD23_RS13060 PF00120 Glutamine synthetase, catalytic domain AMD23_RS13065 PF07722 Peptidase C26 AMD23_RS13070 PF00120 Glutamine synthetase, catalytic domain AMD23_RS13075 PF01266 FAD dependent oxidoreductase AMD23_RS13080 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS13080 PF00072 Response regulator receiver domain AMD23_RS13085 PF01814 Hemerythrin HHE cation binding domain AMD23_RS13090 PF07690 Major Facilitator Superfamily AMD23_RS13090 PF00083 Sugar (and other) transporter AMD23_RS13100 PF00384 Molybdopterin oxidoreductase AMD23_RS13105 PF02634 FdhD/NarQ family AMD23_RS13110 PF07690 Major Facilitator Superfamily AMD23_RS13115 PF00202 Aminotransferase class-III AMD23_RS13125 PF04286 Protein of unknown function (DUF445) AMD23_RS13130 PF00072 Response regulator receiver domain AMD23_RS13130 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS13130 PF00672 HAMP domain AMD23_RS13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS13130 PF01627 Hpt domain AMD23_RS13130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD23_RS13135 PF00072 Response regulator receiver domain AMD23_RS13140 PF07690 Major Facilitator Superfamily AMD23_RS13145 PF05088 Bacterial NAD-glutamate dehydrogenase AMD23_RS13155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS13155 PF00529 HlyD membrane-fusion protein of T1SS AMD23_RS13160 PF00873 AcrB/AcrD/AcrF family AMD23_RS13165 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS13170 PF05524 PEP-utilising enzyme, N-terminal AMD23_RS13170 PF00391 PEP-utilising enzyme, mobile domain AMD23_RS13170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD23_RS13170 PF00381 PTS HPr component phosphorylation site AMD23_RS13170 PF02896 PEP-utilising enzyme, TIM barrel domain AMD23_RS13175 PF00294 pfkB family carbohydrate kinase AMD23_RS13180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD23_RS13215 PF07549 SecD/SecF GG Motif AMD23_RS13215 PF02355 Protein export membrane protein AMD23_RS13220 PF13721 SecD export protein N-terminal TM region AMD23_RS13220 PF02355 Protein export membrane protein AMD23_RS13220 PF07549 SecD/SecF GG Motif AMD23_RS13225 PF02699 Preprotein translocase subunit AMD23_RS13230 PF01702 Queuine tRNA-ribosyltransferase AMD23_RS13235 PF02547 Queuosine biosynthesis protein AMD23_RS13280 PF02927 Cellulase N-terminal ig-like domain AMD23_RS13280 PF00759 Glycosyl hydrolase family 9 AMD23_RS13295 PF00037 4Fe-4S binding domain AMD23_RS13310 PF01467 Cytidylyltransferase-like AMD23_RS13320 PF00183 Hsp90 protein AMD23_RS13320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS13335 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS13335 PF00593 TonB dependent receptor AMD23_RS13345 PF04616 Glycosyl hydrolases family 43 AMD23_RS13350 PF07532 Bacterial Ig-like domain (group 4) AMD23_RS13355 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS13355 PF00593 TonB dependent receptor AMD23_RS13365 PF00082 Subtilase family AMD23_RS13365 PF09286 Pro-kumamolisin, activation domain AMD23_RS13390 PF13520 Amino acid permease AMD23_RS13405 PF00557 Metallopeptidase family M24 AMD23_RS13405 PF01321 Creatinase/Prolidase N-terminal domain AMD23_RS13410 PF00171 Aldehyde dehydrogenase family AMD23_RS13415 PF00701 Dihydrodipicolinate synthetase family AMD23_RS13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS13420 PF04324 BFD-like [2Fe-2S] binding domain AMD23_RS13430 PF01266 FAD dependent oxidoreductase AMD23_RS13435 PF05544 Proline racemase AMD23_RS13445 PF02881 SRP54-type protein, helical bundle domain AMD23_RS13445 PF00448 SRP54-type protein, GTPase domain AMD23_RS13450 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD23_RS13450 PF14815 NUDIX domain AMD23_RS13450 PF10576 Iron-sulfur binding domain of endonuclease III AMD23_RS13450 PF00633 Helix-hairpin-helix motif AMD23_RS13455 PF04362 Bacterial Fe(2+) trafficking AMD23_RS13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS13460 PF00072 Response regulator receiver domain AMD23_RS13460 PF13426 PAS domain AMD23_RS13490 PF08212 Lipocalin-like domain AMD23_RS13500 PF02770 Acyl-CoA dehydrogenase, middle domain AMD23_RS13500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD23_RS13500 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMD23_RS13500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD23_RS13510 PF02780 Transketolase, C-terminal domain AMD23_RS13510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD23_RS13510 PF02779 Transketolase, pyrimidine binding domain AMD23_RS13530 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD23_RS13535 PF00753 Metallo-beta-lactamase superfamily AMD23_RS13535 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD23_RS13540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD23_RS13540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD23_RS13555 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD23_RS13570 PF14667 Polysaccharide biosynthesis C-terminal domain AMD23_RS13580 PF13439 Glycosyltransferase Family 4 AMD23_RS13580 PF00534 Glycosyl transferases group 1 AMD23_RS13600 PF02397 Bacterial sugar transferase AMD23_RS13620 PF13411 MerR HTH family regulatory protein AMD23_RS13625 PF00216 Bacterial DNA-binding protein AMD23_RS13630 PF03483 B3/4 domain AMD23_RS13630 PF03484 tRNA synthetase B5 domain AMD23_RS13630 PF03147 Ferredoxin-fold anticodon binding domain AMD23_RS13630 PF01588 Putative tRNA binding domain AMD23_RS13630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMD23_RS13635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD23_RS13635 PF01409 tRNA synthetases class II core domain (F) AMD23_RS13640 PF00453 Ribosomal protein L20 AMD23_RS13645 PF01632 Ribosomal protein L35 AMD23_RS13650 PF00707 Translation initiation factor IF-3, C-terminal domain AMD23_RS13650 PF05198 Translation initiation factor IF-3, N-terminal domain AMD23_RS13655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD23_RS13655 PF02824 TGS domain AMD23_RS13655 PF03129 Anticodon binding domain AMD23_RS13655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD23_RS13660 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS13665 PF00686 Starch binding domain AMD23_RS13665 PF00128 Alpha amylase, catalytic domain AMD23_RS13670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD23_RS13680 PF10566 Glycoside hydrolase 97 AMD23_RS13680 PF14508 Glycosyl-hydrolase 97 N-terminal AMD23_RS13680 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD23_RS13695 PF00128 Alpha amylase, catalytic domain AMD23_RS13700 PF01527 Transposase AMD23_RS13740 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AMD23_RS13755 PF01464 Transglycosylase SLT domain AMD23_RS13760 PF00437 Type II/IV secretion system protein AMD23_RS13765 PF03743 Bacterial conjugation TrbI-like protein AMD23_RS13785 PF02534 Type IV secretory system Conjugative DNA transfer AMD23_RS13800 PF04851 Type III restriction enzyme, res subunit AMD23_RS13800 PF12344 Ultra-violet resistance protein B AMD23_RS13800 PF17757 UvrB interaction domain AMD23_RS13800 PF00271 Helicase conserved C-terminal domain AMD23_RS13800 PF02151 UvrB/uvrC motif AMD23_RS13865 PF01555 DNA methylase AMD23_RS13915 PF00182 Chitinase class I AMD23_RS13980 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS13980 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMD23_RS13985 PF05567 Neisseria PilC beta-propeller domain AMD23_RS14010 PF06580 Histidine kinase AMD23_RS14010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS14010 PF07694 5TMR of 5TMR-LYT AMD23_RS14015 PF03641 Possible lysine decarboxylase AMD23_RS14015 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AMD23_RS14015 PF11892 Domain of unknown function (DUF3412) AMD23_RS14020 PF00593 TonB dependent receptor AMD23_RS14025 PF01914 MarC family integral membrane protein AMD23_RS14035 PF00462 Glutaredoxin AMD23_RS14040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD23_RS14040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD23_RS14045 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMD23_RS14045 PF02222 ATP-grasp domain AMD23_RS14050 PF00731 AIR carboxylase AMD23_RS14060 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD23_RS14060 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD23_RS14070 PF00575 S1 RNA binding domain AMD23_RS14070 PF03725 3' exoribonuclease family, domain 2 AMD23_RS14070 PF01138 3' exoribonuclease family, domain 1 AMD23_RS14070 PF00013 KH domain AMD23_RS14070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD23_RS14075 PF00312 Ribosomal protein S15 AMD23_RS14080 PF09157 Pseudouridine synthase II TruB, C-terminal AMD23_RS14080 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMD23_RS14080 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD23_RS14085 PF02033 Ribosome-binding factor A AMD23_RS14090 PF04760 Translation initiation factor IF-2, N-terminal region AMD23_RS14090 PF08364 Bacterial translation initiation factor IF-2 associated region AMD23_RS14090 PF00009 Elongation factor Tu GTP binding domain AMD23_RS14090 PF11987 Translation-initiation factor 2 AMD23_RS14095 PF00575 S1 RNA binding domain AMD23_RS14095 PF08529 NusA N-terminal domain AMD23_RS14095 PF13184 NusA-like KH domain AMD23_RS14100 PF17384 RimP C-terminal SH3 domain AMD23_RS14100 PF02576 RimP N-terminal domain AMD23_RS14110 PF00361 Proton-conducting membrane transporter AMD23_RS14115 PF00361 Proton-conducting membrane transporter AMD23_RS14115 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMD23_RS14120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD23_RS14120 PF00361 Proton-conducting membrane transporter AMD23_RS14125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD23_RS14130 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD23_RS14135 PF12838 4Fe-4S dicluster domain AMD23_RS14140 PF00146 NADH dehydrogenase AMD23_RS14145 PF00384 Molybdopterin oxidoreductase AMD23_RS14145 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD23_RS14145 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMD23_RS14150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD23_RS14150 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD23_RS14150 PF10531 SLBB domain AMD23_RS14160 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD23_RS14165 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD23_RS14170 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD23_RS14175 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD23_RS14190 PF00121 Triosephosphate isomerase AMD23_RS14195 PF00106 short chain dehydrogenase AMD23_RS14210 PF03707 Bacterial signalling protein N terminal repeat AMD23_RS14210 PF00563 EAL domain AMD23_RS14210 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS14230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD23_RS14230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD23_RS14230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD23_RS14230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD23_RS14235 PF01039 Carboxyl transferase domain AMD23_RS14235 PF17848 Acetyl-coA carboxylase zinc finger domain AMD23_RS14240 PF00290 Tryptophan synthase alpha chain AMD23_RS14250 PF00291 Pyridoxal-phosphate dependent enzyme AMD23_RS14255 PF03466 LysR substrate binding domain AMD23_RS14255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS14260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD23_RS14265 PF01416 tRNA pseudouridine synthase AMD23_RS14285 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD23_RS14285 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD23_RS14290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD23_RS14290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD23_RS14295 PF01264 Chorismate synthase AMD23_RS14300 PF05175 Methyltransferase small domain AMD23_RS14305 PF02630 SCO1/SenC AMD23_RS14310 PF02666 Phosphatidylserine decarboxylase AMD23_RS14320 PF05872 Bacterial protein of unknown function (DUF853) AMD23_RS14325 PF00293 NUDIX domain AMD23_RS14340 PF03449 Transcription elongation factor, N-terminal AMD23_RS14340 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD23_RS14345 PF00919 Uncharacterized protein family UPF0004 AMD23_RS14345 PF18693 TRAM domain AMD23_RS14345 PF04055 Radical SAM superfamily AMD23_RS14350 PF01738 Dienelactone hydrolase family AMD23_RS14370 PF00692 dUTPase AMD23_RS14375 PF10609 NUBPL iron-transfer P-loop NTPase AMD23_RS14380 PF00593 TonB dependent receptor AMD23_RS14380 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS14395 PF05649 Peptidase family M13 AMD23_RS14395 PF01431 Peptidase family M13 AMD23_RS14400 PF05649 Peptidase family M13 AMD23_RS14400 PF01431 Peptidase family M13 AMD23_RS14415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD23_RS14420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS14420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD23_RS14425 PF01266 FAD dependent oxidoreductase AMD23_RS14430 PF04235 Protein of unknown function (DUF418) AMD23_RS14435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD23_RS14440 PF00877 NlpC/P60 family AMD23_RS14445 PF00877 NlpC/P60 family AMD23_RS14460 PF00375 Sodium:dicarboxylate symporter family AMD23_RS14465 PF00245 Alkaline phosphatase AMD23_RS14470 PF09179 TilS substrate binding domain AMD23_RS14470 PF11734 TilS substrate C-terminal domain AMD23_RS14470 PF01171 PP-loop family AMD23_RS14475 PF02609 Exonuclease VII small subunit AMD23_RS14480 PF00348 Polyprenyl synthetase AMD23_RS14485 PF14521 Lysine-specific metallo-endopeptidase AMD23_RS14495 PF01523 Putative modulator of DNA gyrase AMD23_RS14500 PF04751 Protein of unknown function (DUF615) AMD23_RS14505 PF01523 Putative modulator of DNA gyrase AMD23_RS14515 PF13116 Protein of unknown function AMD23_RS14515 PF13502 AsmA-like C-terminal region AMD23_RS14520 PF00575 S1 RNA binding domain AMD23_RS14520 PF10150 Ribonuclease E/G family AMD23_RS14525 PF02545 Maf-like protein AMD23_RS14530 PF04402 Protein of unknown function (DUF541) AMD23_RS14545 PF02590 Predicted SPOUT methyltransferase AMD23_RS14560 PF01467 Cytidylyltransferase-like AMD23_RS14575 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD23_RS14575 PF00133 tRNA synthetases class I (I, L, M and V) AMD23_RS14575 PF08264 Anticodon-binding domain of tRNA AMD23_RS14585 PF00085 Thioredoxin AMD23_RS14610 PF04070 Domain of unknown function (DUF378) AMD23_RS14615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD23_RS14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS14625 PF03466 LysR substrate binding domain AMD23_RS14655 PF00005 ABC transporter AMD23_RS14655 PF00664 ABC transporter transmembrane region AMD23_RS14665 PF00873 AcrB/AcrD/AcrF family AMD23_RS14680 PF02321 Outer membrane efflux protein AMD23_RS14685 PF00072 Response regulator receiver domain AMD23_RS14685 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS14690 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS14690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS14690 PF00672 HAMP domain AMD23_RS14695 PF00999 Sodium/hydrogen exchanger family AMD23_RS14700 PF00144 Beta-lactamase AMD23_RS14705 PF03737 Aldolase/RraA AMD23_RS14725 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS14730 PF01479 S4 domain AMD23_RS14730 PF00849 RNA pseudouridylate synthase AMD23_RS14735 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS14735 PF08448 PAS fold AMD23_RS14735 PF00563 EAL domain AMD23_RS14740 PF00270 DEAD/DEAH box helicase AMD23_RS14740 PF00271 Helicase conserved C-terminal domain AMD23_RS14740 PF03880 DbpA RNA binding domain AMD23_RS14790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD23_RS14790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD23_RS14800 PF00654 Voltage gated chloride channel AMD23_RS14805 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS14805 PF00107 Zinc-binding dehydrogenase AMD23_RS14820 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS14820 PF00593 TonB dependent receptor AMD23_RS14830 PF01483 Proprotein convertase P-domain AMD23_RS14830 PF00082 Subtilase family AMD23_RS14840 PF01483 Proprotein convertase P-domain AMD23_RS14840 PF00082 Subtilase family AMD23_RS14850 PF00248 Aldo/keto reductase family AMD23_RS14855 PF07690 Major Facilitator Superfamily AMD23_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS14860 PF03466 LysR substrate binding domain AMD23_RS14870 PF06719 AraC-type transcriptional regulator N-terminus AMD23_RS14870 PF12833 Helix-turn-helix domain AMD23_RS14880 PF16859 Tetracyclin repressor-like, C-terminal domain AMD23_RS14880 PF00440 Bacterial regulatory proteins, tetR family AMD23_RS14885 PF02321 Outer membrane efflux protein AMD23_RS14890 PF00873 AcrB/AcrD/AcrF family AMD23_RS14895 PF00529 HlyD membrane-fusion protein of T1SS AMD23_RS14895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS14905 PF01475 Ferric uptake regulator family AMD23_RS14910 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD23_RS14935 PF06123 Inner membrane protein CreD AMD23_RS14945 PF00672 HAMP domain AMD23_RS14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS14945 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS14950 PF00072 Response regulator receiver domain AMD23_RS14950 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS14955 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMD23_RS14965 PF03461 TRCF domain AMD23_RS14965 PF17757 UvrB interaction domain AMD23_RS14965 PF00271 Helicase conserved C-terminal domain AMD23_RS14965 PF00270 DEAD/DEAH box helicase AMD23_RS14965 PF02559 CarD-like/TRCF domain AMD23_RS15000 PF01627 Hpt domain AMD23_RS15000 PF02895 Signal transducing histidine kinase, homodimeric domain AMD23_RS15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS15000 PF09078 CheY binding AMD23_RS15000 PF01584 CheW-like domain AMD23_RS15005 PF00672 HAMP domain AMD23_RS15005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS15005 PF02203 Tar ligand binding domain homologue AMD23_RS15010 PF01584 CheW-like domain AMD23_RS15015 PF00563 EAL domain AMD23_RS15015 PF13426 PAS domain AMD23_RS15015 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS15020 PF03705 CheR methyltransferase, all-alpha domain AMD23_RS15020 PF01739 CheR methyltransferase, SAM binding domain AMD23_RS15025 PF00072 Response regulator receiver domain AMD23_RS15025 PF01339 CheB methylesterase AMD23_RS15030 PF13091 PLD-like domain AMD23_RS15035 PF05649 Peptidase family M13 AMD23_RS15035 PF01431 Peptidase family M13 AMD23_RS15045 PF00300 Histidine phosphatase superfamily (branch 1) AMD23_RS15050 PF04493 Endonuclease V AMD23_RS15060 PF05726 Pirin C-terminal cupin domain AMD23_RS15060 PF02678 Pirin AMD23_RS15075 PF02678 Pirin AMD23_RS15075 PF05726 Pirin C-terminal cupin domain AMD23_RS15080 PF02554 Carbon starvation protein CstA AMD23_RS15080 PF13722 5TM C-terminal transporter carbon starvation CstA AMD23_RS15085 PF04328 Selenoprotein, putative AMD23_RS15130 PF01527 Transposase AMD23_RS15140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD23_RS15140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD23_RS15145 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD23_RS15145 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD23_RS15150 PF01799 [2Fe-2S] binding domain AMD23_RS15150 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD23_RS15150 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD23_RS15155 PF08990 Erythronolide synthase docking AMD23_RS15155 PF09277 Erythronolide synthase, docking AMD23_RS15155 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD23_RS15155 PF00698 Acyl transferase domain AMD23_RS15155 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD23_RS15155 PF08659 KR domain AMD23_RS15155 PF16197 Ketoacyl-synthetase C-terminal extension AMD23_RS15155 PF14765 Polyketide synthase dehydratase AMD23_RS15155 PF00550 Phosphopantetheine attachment site AMD23_RS15155 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS15160 PF00360 Phytochrome region AMD23_RS15160 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS15160 PF01590 GAF domain AMD23_RS15160 PF00563 EAL domain AMD23_RS15165 PF00436 Single-strand binding protein family AMD23_RS15170 PF00348 Polyprenyl synthetase AMD23_RS15180 PF08245 Mur ligase middle domain AMD23_RS15180 PF02875 Mur ligase family, glutamate ligase domain AMD23_RS15195 PF01842 ACT domain AMD23_RS15195 PF00696 Amino acid kinase family AMD23_RS15200 PF02567 Phenazine biosynthesis-like protein AMD23_RS15205 PF02567 Phenazine biosynthesis-like protein AMD23_RS15215 PF02566 OsmC-like protein AMD23_RS15220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD23_RS15220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD23_RS15225 PF03652 Holliday junction resolvase AMD23_RS15230 PF02622 Uncharacterized ACR, COG1678 AMD23_RS15240 PF00117 Glutamine amidotransferase class-I AMD23_RS15240 PF00958 GMP synthase C terminal domain AMD23_RS15240 PF13673 Acetyltransferase (GNAT) domain AMD23_RS15240 PF03352 Methyladenine glycosylase AMD23_RS15240 PF13302 Acetyltransferase (GNAT) domain AMD23_RS15250 PF03211 Pectate lyase AMD23_RS15255 PF00437 Type II/IV secretion system protein AMD23_RS15260 PF00437 Type II/IV secretion system protein AMD23_RS15265 PF01168 Alanine racemase, N-terminal domain AMD23_RS15270 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD23_RS15270 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD23_RS15280 PF01551 Peptidase family M23 AMD23_RS15300 PF01965 DJ-1/PfpI family AMD23_RS15310 PF02082 Transcriptional regulator AMD23_RS15315 PF01458 Uncharacterized protein family (UPF0051) AMD23_RS15320 PF00005 ABC transporter AMD23_RS15325 PF01458 Uncharacterized protein family (UPF0051) AMD23_RS15330 PF00266 Aminotransferase class-V AMD23_RS15340 PF00355 Rieske [2Fe-2S] domain AMD23_RS15345 PF00593 TonB dependent receptor AMD23_RS15345 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS15350 PF18331 PKHD-type hydroxylase C-terminal domain AMD23_RS15350 PF13640 2OG-Fe(II) oxygenase superfamily AMD23_RS15375 PF02424 ApbE family AMD23_RS15380 PF00667 FAD binding domain AMD23_RS15380 PF00258 Flavodoxin AMD23_RS15380 PF00175 Oxidoreductase NAD-binding domain AMD23_RS15400 PF01546 Peptidase family M20/M25/M40 AMD23_RS15400 PF07687 Peptidase dimerisation domain AMD23_RS15410 PF01636 Phosphotransferase enzyme family AMD23_RS15415 PF00483 Nucleotidyl transferase AMD23_RS15420 PF00308 Bacterial dnaA protein AMD23_RS15425 PF01594 AI-2E family transporter AMD23_RS15435 PF00586 AIR synthase related protein, N-terminal domain AMD23_RS15435 PF02769 AIR synthase related protein, C-terminal domain AMD23_RS15445 PF00551 Formyl transferase AMD23_RS15465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD23_RS15470 PF01722 BolA-like protein AMD23_RS15475 PF00571 CBS domain AMD23_RS15475 PF01380 SIS domain AMD23_RS15490 PF03968 OstA-like protein AMD23_RS15495 PF00005 ABC transporter AMD23_RS15500 PF04552 Sigma-54, DNA binding domain AMD23_RS15500 PF04963 Sigma-54 factor, core binding domain AMD23_RS15500 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD23_RS15505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD23_RS15510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD23_RS15515 PF07475 HPr Serine kinase C-terminal domain AMD23_RS15515 PF02603 HPr Serine kinase N terminus AMD23_RS15520 PF03668 P-loop ATPase protein family AMD23_RS15530 PF00381 PTS HPr component phosphorylation site AMD23_RS15535 PF05524 PEP-utilising enzyme, N-terminal AMD23_RS15535 PF00391 PEP-utilising enzyme, mobile domain AMD23_RS15535 PF02896 PEP-utilising enzyme, TIM barrel domain AMD23_RS15540 PF00571 CBS domain AMD23_RS15540 PF01769 Divalent cation transporter AMD23_RS15540 PF03448 MgtE intracellular N domain AMD23_RS15545 PF00756 Putative esterase AMD23_RS15550 PF02322 Cytochrome bd terminal oxidase subunit II AMD23_RS15555 PF01654 Cytochrome bd terminal oxidase subunit I AMD23_RS15565 PF00324 Amino acid permease AMD23_RS15570 PF00544 Pectate lyase AMD23_RS15575 PF00561 alpha/beta hydrolase fold AMD23_RS15585 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS15590 PF00324 Amino acid permease AMD23_RS15610 PF12706 Beta-lactamase superfamily domain AMD23_RS15615 PF04820 Tryptophan halogenase AMD23_RS15640 PF09278 MerR, DNA binding AMD23_RS15640 PF00376 MerR family regulatory protein AMD23_RS15645 PF07690 Major Facilitator Superfamily AMD23_RS15655 PF03738 Glutathionylspermidine synthase preATP-grasp AMD23_RS15680 PF04012 PspA/IM30 family AMD23_RS15690 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD23_RS15690 PF01243 Pyridoxamine 5'-phosphate oxidase AMD23_RS15695 PF01202 Shikimate kinase AMD23_RS15700 PF01761 3-dehydroquinate synthase AMD23_RS15710 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD23_RS15780 PF02954 Bacterial regulatory protein, Fis family AMD23_RS15780 PF00158 Sigma-54 interaction domain AMD23_RS15780 PF01590 GAF domain AMD23_RS15785 PF07690 Major Facilitator Superfamily AMD23_RS15790 PF00072 Response regulator receiver domain AMD23_RS15790 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD23_RS15790 PF00672 HAMP domain AMD23_RS15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS15790 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS15790 PF01627 Hpt domain AMD23_RS15795 PF00672 HAMP domain AMD23_RS15795 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS15795 PF01627 Hpt domain AMD23_RS15795 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD23_RS15795 PF00072 Response regulator receiver domain AMD23_RS15795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS15805 PF00072 Response regulator receiver domain AMD23_RS15805 PF01627 Hpt domain AMD23_RS15805 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS15810 PF04264 YceI-like domain AMD23_RS15830 PF03315 Serine dehydratase beta chain AMD23_RS15830 PF03313 Serine dehydratase alpha chain AMD23_RS15835 PF12697 Alpha/beta hydrolase family AMD23_RS15840 PF00696 Amino acid kinase family AMD23_RS15840 PF00742 Homoserine dehydrogenase AMD23_RS15840 PF03447 Homoserine dehydrogenase, NAD binding domain AMD23_RS15845 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD23_RS15850 PF00561 alpha/beta hydrolase fold AMD23_RS15855 PF01551 Peptidase family M23 AMD23_RS15855 PF08525 Opacity-associated protein A N-terminal motif AMD23_RS15855 PF01476 LysM domain AMD23_RS15860 PF00009 Elongation factor Tu GTP binding domain AMD23_RS15860 PF16658 Class II release factor RF3, C-terminal domain AMD23_RS15865 PF03006 Haemolysin-III related AMD23_RS15870 PF05170 AsmA family AMD23_RS15875 PF00571 CBS domain AMD23_RS15875 PF00478 IMP dehydrogenase / GMP reductase domain AMD23_RS15880 PF00535 Glycosyl transferase family 2 AMD23_RS15885 PF00912 Transglycosylase AMD23_RS15890 PF01430 Hsp33 protein AMD23_RS15900 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS15900 PF00593 TonB dependent receptor AMD23_RS15910 PF00440 Bacterial regulatory proteins, tetR family AMD23_RS15915 PF00561 alpha/beta hydrolase fold AMD23_RS15920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD23_RS15920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD23_RS15920 PF09317 Domain of unknown function (DUF1974) AMD23_RS15945 PF01597 Glycine cleavage H-protein AMD23_RS15950 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD23_RS15950 PF01571 Aminomethyltransferase folate-binding domain AMD23_RS15960 PF16200 C-terminal region of band_7 AMD23_RS15960 PF01145 SPFH domain / Band 7 family AMD23_RS15965 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMD23_RS15970 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD23_RS15975 PF00459 Inositol monophosphatase family AMD23_RS15980 PF00293 NUDIX domain AMD23_RS15985 PF00202 Aminotransferase class-III AMD23_RS15990 PF04452 RNA methyltransferase AMD23_RS15995 PF02685 Glucokinase AMD23_RS16010 PF00704 Glycosyl hydrolases family 18 AMD23_RS16010 PF01476 LysM domain AMD23_RS16015 PF07691 PA14 domain AMD23_RS16015 PF02838 Glycosyl hydrolase family 20, domain 2 AMD23_RS16015 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD23_RS16025 PF07691 PA14 domain AMD23_RS16025 PF14310 Fibronectin type III-like domain AMD23_RS16025 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD23_RS16025 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD23_RS16035 PF01301 Glycosyl hydrolases family 35 AMD23_RS16040 PF13520 Amino acid permease AMD23_RS16050 PF02056 Family 4 glycosyl hydrolase AMD23_RS16050 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD23_RS16060 PF07971 Glycosyl hydrolase family 92 AMD23_RS16060 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD23_RS16065 PF01301 Glycosyl hydrolases family 35 AMD23_RS16095 PF03932 CutC family AMD23_RS16100 PF01112 Asparaginase AMD23_RS16110 PF13302 Acetyltransferase (GNAT) domain AMD23_RS16125 PF00072 Response regulator receiver domain AMD23_RS16125 PF01627 Hpt domain AMD23_RS16125 PF01584 CheW-like domain AMD23_RS16125 PF02895 Signal transducing histidine kinase, homodimeric domain AMD23_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS16130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS16130 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMD23_RS16135 PF01584 CheW-like domain AMD23_RS16140 PF00072 Response regulator receiver domain AMD23_RS16145 PF00072 Response regulator receiver domain AMD23_RS16150 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD23_RS16150 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD23_RS16160 PF03747 ADP-ribosylglycohydrolase AMD23_RS16165 PF00814 Glycoprotease family AMD23_RS16170 PF13307 Helicase C-terminal domain AMD23_RS16170 PF04851 Type III restriction enzyme, res subunit AMD23_RS16180 PF00912 Transglycosylase AMD23_RS16180 PF14814 Bifunctional transglycosylase second domain AMD23_RS16180 PF00905 Penicillin binding protein transpeptidase domain AMD23_RS16185 PF00535 Glycosyl transferase family 2 AMD23_RS16195 PF04607 Region found in RelA / SpoT proteins AMD23_RS16195 PF02824 TGS domain AMD23_RS16195 PF13291 ACT domain AMD23_RS16200 PF12706 Beta-lactamase superfamily domain AMD23_RS16205 PF03070 TENA/THI-4/PQQC family AMD23_RS16210 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD23_RS16215 PF13186 Iron-sulfur cluster-binding domain AMD23_RS16215 PF04055 Radical SAM superfamily AMD23_RS16230 PF02685 Glucokinase AMD23_RS16240 PF00271 Helicase conserved C-terminal domain AMD23_RS16240 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD23_RS16240 PF00270 DEAD/DEAH box helicase AMD23_RS16240 PF11898 Domain of unknown function (DUF3418) AMD23_RS16240 PF04408 Helicase associated domain (HA2) AMD23_RS16245 PF00210 Ferritin-like domain AMD23_RS16250 PF16124 RecQ zinc-binding AMD23_RS16250 PF00271 Helicase conserved C-terminal domain AMD23_RS16250 PF09382 RQC domain AMD23_RS16250 PF00570 HRDC domain AMD23_RS16250 PF00270 DEAD/DEAH box helicase AMD23_RS16285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS16285 PF00672 HAMP domain AMD23_RS16285 PF02203 Tar ligand binding domain homologue AMD23_RS16290 PF01810 LysE type translocator AMD23_RS16295 PF03466 LysR substrate binding domain AMD23_RS16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS16305 PF07536 HWE histidine kinase AMD23_RS16305 PF13581 Histidine kinase-like ATPase domain AMD23_RS16305 PF13426 PAS domain AMD23_RS16310 PF06508 Queuosine biosynthesis protein QueC AMD23_RS16320 PF04055 Radical SAM superfamily AMD23_RS16330 PF00691 OmpA family AMD23_RS16335 PF04052 TolB amino-terminal domain AMD23_RS16335 PF07676 WD40-like Beta Propeller Repeat AMD23_RS16345 PF02472 Biopolymer transport protein ExbD/TolR AMD23_RS16350 PF01618 MotA/TolQ/ExbB proton channel family AMD23_RS16355 PF03061 Thioesterase superfamily AMD23_RS16360 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMD23_RS16360 PF17864 RuvB AAA lid domain AMD23_RS16360 PF05491 RuvB C-terminal winged helix domain AMD23_RS16370 PF02705 K+ potassium transporter AMD23_RS16375 PF01330 RuvA N terminal domain AMD23_RS16375 PF07499 RuvA, C-terminal domain AMD23_RS16380 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD23_RS16385 PF01709 Transcriptional regulator AMD23_RS16400 PF02938 GAD domain AMD23_RS16400 PF00152 tRNA synthetases class II (D, K and N) AMD23_RS16400 PF01336 OB-fold nucleic acid binding domain AMD23_RS16415 PF07690 Major Facilitator Superfamily AMD23_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS16440 PF03466 LysR substrate binding domain AMD23_RS16450 PF12848 ABC transporter AMD23_RS16450 PF00005 ABC transporter AMD23_RS16455 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS16455 PF00593 TonB dependent receptor AMD23_RS16470 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS16470 PF00593 TonB dependent receptor AMD23_RS16475 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS16475 PF00593 TonB dependent receptor AMD23_RS16480 PF00067 Cytochrome P450 AMD23_RS16485 PF02254 TrkA-N domain AMD23_RS16485 PF00999 Sodium/hydrogen exchanger family AMD23_RS16510 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS16510 PF00593 TonB dependent receptor AMD23_RS16510 PF07660 Secretin and TonB N terminus short domain AMD23_RS16520 PF06276 Ferric iron reductase FhuF-like transporter AMD23_RS16520 PF04183 IucA / IucC family AMD23_RS16525 PF07690 Major Facilitator Superfamily AMD23_RS16530 PF04183 IucA / IucC family AMD23_RS16530 PF06276 Ferric iron reductase FhuF-like transporter AMD23_RS16535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD23_RS16535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD23_RS16550 PF02654 Cobalamin-5-phosphate synthase AMD23_RS16560 PF02277 Phosphoribosyltransferase AMD23_RS16565 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD23_RS16570 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD23_RS16570 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD23_RS16575 PF00155 Aminotransferase class I and II AMD23_RS16580 PF17113 Regulatory signalling modulator protein AmpE AMD23_RS16580 PF03186 CobD/Cbib protein AMD23_RS16585 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD23_RS16585 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD23_RS16600 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS16600 PF00593 TonB dependent receptor AMD23_RS16605 PF10431 C-terminal, D2-small domain, of ClpB protein AMD23_RS16605 PF02861 Clp amino terminal domain, pathogenicity island component AMD23_RS16605 PF17871 AAA lid domain AMD23_RS16605 PF07724 AAA domain (Cdc48 subfamily) AMD23_RS16605 PF00004 ATPase family associated with various cellular activities (AAA) AMD23_RS16610 PF00005 ABC transporter AMD23_RS16615 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS16620 PF09084 NMT1/THI5 like AMD23_RS16625 PF00248 Aldo/keto reductase family AMD23_RS16630 PF00296 Luciferase-like monooxygenase AMD23_RS16635 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS16635 PF00593 TonB dependent receptor AMD23_RS16640 PF01541 GIY-YIG catalytic domain AMD23_RS16675 PF00593 TonB dependent receptor AMD23_RS16675 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS16680 PF02358 Trehalose-phosphatase AMD23_RS16685 PF00723 Glycosyl hydrolases family 15 AMD23_RS16690 PF00982 Glycosyltransferase family 20 AMD23_RS16695 PF01011 PQQ enzyme repeat AMD23_RS16700 PF02203 Tar ligand binding domain homologue AMD23_RS16700 PF00672 HAMP domain AMD23_RS16700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS16705 PF04134 Protein of unknown function, DUF393 AMD23_RS16715 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD23_RS16720 PF00849 RNA pseudouridylate synthase AMD23_RS16725 PF13525 Outer membrane lipoprotein AMD23_RS16735 PF02540 NAD synthase AMD23_RS16735 PF00795 Carbon-nitrogen hydrolase AMD23_RS16765 PF13406 Transglycosylase SLT domain AMD23_RS16770 PF01526 Tn3 transposase DDE domain AMD23_RS16770 PF13700 Domain of unknown function (DUF4158) AMD23_RS16790 PF01129 NAD:arginine ADP-ribosyltransferase AMD23_RS16815 PF02629 CoA binding domain AMD23_RS16815 PF00549 CoA-ligase AMD23_RS16820 PF00549 CoA-ligase AMD23_RS16820 PF08442 ATP-grasp domain AMD23_RS16825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS16825 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS16830 PF00158 Sigma-54 interaction domain AMD23_RS16830 PF00072 Response regulator receiver domain AMD23_RS16830 PF02954 Bacterial regulatory protein, Fis family AMD23_RS16835 PF00437 Type II/IV secretion system protein AMD23_RS16835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD23_RS16840 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD23_RS16840 PF00437 Type II/IV secretion system protein AMD23_RS16845 PF00437 Type II/IV secretion system protein AMD23_RS16845 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD23_RS16850 PF00114 Pilin (bacterial filament) AMD23_RS16850 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS16855 PF00114 Pilin (bacterial filament) AMD23_RS16855 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS16860 PF00482 Type II secretion system (T2SS), protein F AMD23_RS16865 PF06750 Bacterial Peptidase A24 N-terminal domain AMD23_RS16865 PF01478 Type IV leader peptidase family AMD23_RS16870 PF01121 Dephospho-CoA kinase AMD23_RS16890 PF13333 Integrase core domain AMD23_RS16890 PF13276 HTH-like domain AMD23_RS16890 PF00665 Integrase core domain AMD23_RS16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS16895 PF16736 Single Cache-like AMD23_RS16895 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS16895 PF00989 PAS fold AMD23_RS16900 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS16900 PF00072 Response regulator receiver domain AMD23_RS16910 PF18030 RimK PreATP-grasp domain AMD23_RS16910 PF08443 RimK-like ATP-grasp domain AMD23_RS16915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD23_RS16915 PF00128 Alpha amylase, catalytic domain AMD23_RS16970 PF04002 RadC-like JAB domain AMD23_RS16995 PF00072 Response regulator receiver domain AMD23_RS16995 PF13426 PAS domain AMD23_RS16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS17000 PF00072 Response regulator receiver domain AMD23_RS17000 PF13426 PAS domain AMD23_RS17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS17040 PF01527 Transposase AMD23_RS17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS17085 PF08448 PAS fold AMD23_RS17085 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS17085 PF13188 PAS domain AMD23_RS17085 PF00072 Response regulator receiver domain AMD23_RS17110 PF13676 TIR domain AMD23_RS17125 PF03797 Autotransporter beta-domain AMD23_RS17125 PF00657 GDSL-like Lipase/Acylhydrolase AMD23_RS17135 PF05690 Thiazole biosynthesis protein ThiG AMD23_RS17140 PF02390 Putative methyltransferase AMD23_RS17145 PF02080 TrkA-C domain AMD23_RS17145 PF03600 Citrate transporter AMD23_RS17160 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD23_RS17165 PF01741 Large-conductance mechanosensitive channel, MscL AMD23_RS17180 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS17190 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD23_RS17190 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AMD23_RS17190 PF00703 Glycosyl hydrolases family 2 AMD23_RS17195 PF10566 Glycoside hydrolase 97 AMD23_RS17195 PF14508 Glycosyl-hydrolase 97 N-terminal AMD23_RS17195 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD23_RS17205 PF00135 Carboxylesterase family AMD23_RS17210 PF00588 SpoU rRNA Methylase family AMD23_RS17210 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD23_RS17220 PF11838 ERAP1-like C-terminal domain AMD23_RS17220 PF01433 Peptidase family M1 domain AMD23_RS17270 PF00873 AcrB/AcrD/AcrF family AMD23_RS17275 PF00529 HlyD membrane-fusion protein of T1SS AMD23_RS17275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS17280 PF00009 Elongation factor Tu GTP binding domain AMD23_RS17285 PF01507 Phosphoadenosine phosphosulfate reductase family AMD23_RS17290 PF00258 Flavodoxin AMD23_RS17290 PF00667 FAD binding domain AMD23_RS17290 PF00175 Oxidoreductase NAD-binding domain AMD23_RS17295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD23_RS17295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD23_RS17300 PF01507 Phosphoadenosine phosphosulfate reductase family AMD23_RS17320 PF00072 Response regulator receiver domain AMD23_RS17320 PF01627 Hpt domain AMD23_RS17320 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS17335 PF03466 LysR substrate binding domain AMD23_RS17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS17340 PF10414 Sirohaem synthase dimerisation region AMD23_RS17340 PF14824 Sirohaem biosynthesis protein central AMD23_RS17340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD23_RS17345 PF00291 Pyridoxal-phosphate dependent enzyme AMD23_RS17355 PF01661 Macro domain AMD23_RS17360 PF00274 Fructose-bisphosphate aldolase class-I AMD23_RS17365 PF00224 Pyruvate kinase, barrel domain AMD23_RS17365 PF02887 Pyruvate kinase, alpha/beta domain AMD23_RS17370 PF13419 Haloacid dehalogenase-like hydrolase AMD23_RS17375 PF00162 Phosphoglycerate kinase AMD23_RS17395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD23_RS17395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD23_RS17405 PF03922 OmpW family AMD23_RS17410 PF03922 OmpW family AMD23_RS17420 PF00753 Metallo-beta-lactamase superfamily AMD23_RS17420 PF04273 Putative phosphatase (DUF442) AMD23_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS17435 PF00005 ABC transporter AMD23_RS17435 PF03459 TOBE domain AMD23_RS17470 PF03734 L,D-transpeptidase catalytic domain AMD23_RS17470 PF01476 LysM domain AMD23_RS17475 PF04225 Opacity-associated protein A LysM-like domain AMD23_RS17475 PF01551 Peptidase family M23 AMD23_RS17485 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS17485 PF00593 TonB dependent receptor AMD23_RS17505 PF00456 Transketolase, thiamine diphosphate binding domain AMD23_RS17505 PF02780 Transketolase, C-terminal domain AMD23_RS17505 PF02779 Transketolase, pyrimidine binding domain AMD23_RS17510 PF00375 Sodium:dicarboxylate symporter family AMD23_RS17520 PF07584 Aerotolerance regulator N-terminal AMD23_RS17520 PF00092 von Willebrand factor type A domain AMD23_RS17540 PF17863 AAA lid domain AMD23_RS17540 PF07726 ATPase family associated with various cellular activities (AAA) AMD23_RS17545 PF03958 Bacterial type II/III secretion system short domain AMD23_RS17545 PF00263 Bacterial type II and III secretion system protein AMD23_RS17545 PF07660 Secretin and TonB N terminus short domain AMD23_RS17545 PF11741 AMIN domain AMD23_RS17550 PF04351 Pilus assembly protein, PilP AMD23_RS17555 PF04350 Pilus assembly protein, PilO AMD23_RS17560 PF05137 Fimbrial assembly protein (PilN) AMD23_RS17565 PF11104 Type IV pilus assembly protein PilM; AMD23_RS17570 PF17092 Penicillin-binding protein OB-like domain AMD23_RS17570 PF00912 Transglycosylase AMD23_RS17570 PF00905 Penicillin binding protein transpeptidase domain AMD23_RS17580 PF00285 Citrate synthase, C-terminal domain AMD23_RS17585 PF01197 Ribosomal protein L31 AMD23_RS17590 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD23_RS17595 PF17191 RecG wedge domain AMD23_RS17595 PF00270 DEAD/DEAH box helicase AMD23_RS17595 PF00271 Helicase conserved C-terminal domain AMD23_RS17600 PF01042 Endoribonuclease L-PSP AMD23_RS17605 PF04607 Region found in RelA / SpoT proteins AMD23_RS17605 PF02824 TGS domain AMD23_RS17605 PF13291 ACT domain AMD23_RS17610 PF01192 RNA polymerase Rpb6 AMD23_RS17615 PF00625 Guanylate kinase AMD23_RS17620 PF03755 YicC-like family, N-terminal region AMD23_RS17620 PF08340 Domain of unknown function (DUF1732) AMD23_RS17625 PF03725 3' exoribonuclease family, domain 2 AMD23_RS17625 PF01138 3' exoribonuclease family, domain 1 AMD23_RS17635 PF01725 Ham1 family AMD23_RS17640 PF04055 Radical SAM superfamily AMD23_RS17640 PF06969 HemN C-terminal domain AMD23_RS17655 PF00557 Metallopeptidase family M24 AMD23_RS17665 PF00557 Metallopeptidase family M24 AMD23_RS17665 PF05195 Aminopeptidase P, N-terminal domain AMD23_RS17670 PF03695 Uncharacterised protein family (UPF0149) AMD23_RS17680 PF05164 Cell division protein ZapA AMD23_RS17685 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD23_RS17695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD23_RS17705 PF13369 Transglutaminase-like superfamily AMD23_RS17710 PF00301 Rubredoxin AMD23_RS17715 PF02581 Thiamine monophosphate synthase AMD23_RS17730 PF00202 Aminotransferase class-III AMD23_RS17735 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS17735 PF17874 MalT-like TPR region AMD23_RS17740 PF00127 Copper binding proteins, plastocyanin/azurin family AMD23_RS17745 PF00155 Aminotransferase class I and II AMD23_RS17755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD23_RS17755 PF00034 Cytochrome c AMD23_RS17760 PF01593 Flavin containing amine oxidoreductase AMD23_RS17775 PF00202 Aminotransferase class-III AMD23_RS17780 PF00520 Ion transport protein AMD23_RS17780 PF00027 Cyclic nucleotide-binding domain AMD23_RS17795 PF01569 PAP2 superfamily AMD23_RS17800 PF01062 Bestrophin, RFP-TM, chloride channel AMD23_RS17810 PF01225 Mur ligase family, catalytic domain AMD23_RS17810 PF02875 Mur ligase family, glutamate ligase domain AMD23_RS17810 PF08245 Mur ligase middle domain AMD23_RS17820 PF00365 Phosphofructokinase AMD23_RS17830 PF03030 Inorganic H+ pyrophosphatase AMD23_RS17840 PF00719 Inorganic pyrophosphatase AMD23_RS17850 PF00593 TonB dependent receptor AMD23_RS17850 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS17855 PF12833 Helix-turn-helix domain AMD23_RS17860 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS17860 PF18500 CadC C-terminal domain 1 AMD23_RS17865 PF13667 ThiC-associated domain AMD23_RS17865 PF01964 Radical SAM ThiC family AMD23_RS17870 PF00593 TonB dependent receptor AMD23_RS17870 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS17875 PF00672 HAMP domain AMD23_RS17875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS17885 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD23_RS17885 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMD23_RS17890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD23_RS17890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD23_RS17890 PF00205 Thiamine pyrophosphate enzyme, central domain AMD23_RS17900 PF00291 Pyridoxal-phosphate dependent enzyme AMD23_RS17905 PF00682 HMGL-like AMD23_RS17905 PF08502 LeuA allosteric (dimerisation) domain AMD23_RS17910 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD23_RS17915 PF00694 Aconitase C-terminal domain AMD23_RS17920 PF00330 Aconitase family (aconitate hydratase) AMD23_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS17930 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS17945 PF02321 Outer membrane efflux protein AMD23_RS17950 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD23_RS17955 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD23_RS17980 PF00390 Malic enzyme, N-terminal domain AMD23_RS17980 PF03949 Malic enzyme, NAD binding domain AMD23_RS17980 PF01515 Phosphate acetyl/butaryl transferase AMD23_RS17985 PF00375 Sodium:dicarboxylate symporter family AMD23_RS17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS17995 PF02743 Cache domain AMD23_RS17995 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS18000 PF07690 Major Facilitator Superfamily AMD23_RS18010 PF03466 LysR substrate binding domain AMD23_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS18015 PF00248 Aldo/keto reductase family AMD23_RS18030 PF00072 Response regulator receiver domain AMD23_RS18030 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS18040 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS18040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS18040 PF08521 Two-component sensor kinase N-terminal AMD23_RS18045 PF00072 Response regulator receiver domain AMD23_RS18045 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS18055 PF03600 Citrate transporter AMD23_RS18060 PF00106 short chain dehydrogenase AMD23_RS18065 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS18080 PF00128 Alpha amylase, catalytic domain AMD23_RS18095 PF03193 RsgA GTPase AMD23_RS18100 PF00155 Aminotransferase class I and II AMD23_RS18115 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS18115 PF00593 TonB dependent receptor AMD23_RS18120 PF01522 Polysaccharide deacetylase AMD23_RS18125 PF00462 Glutaredoxin AMD23_RS18140 PF01527 Transposase AMD23_RS18160 PF02645 Uncharacterised protein, DegV family COG1307 AMD23_RS18165 PF01327 Polypeptide deformylase AMD23_RS18170 PF03960 ArsC family AMD23_RS18185 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AMD23_RS18190 PF01270 Glycosyl hydrolases family 8 AMD23_RS18195 PF03170 Bacterial cellulose synthase subunit AMD23_RS18200 PF03552 Cellulose synthase AMD23_RS18200 PF00535 Glycosyl transferase family 2 AMD23_RS18200 PF07238 PilZ domain AMD23_RS18215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD23_RS18215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMD23_RS18260 PF00593 TonB dependent receptor AMD23_RS18260 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS18270 PF00392 Bacterial regulatory proteins, gntR family AMD23_RS18270 PF07702 UTRA domain AMD23_RS18280 PF00263 Bacterial type II and III secretion system protein AMD23_RS18280 PF03958 Bacterial type II/III secretion system short domain AMD23_RS18290 PF10741 Type II secretion system (T2SS), protein M subtype b AMD23_RS18295 PF05137 Fimbrial assembly protein (PilN) AMD23_RS18300 PF03934 Type II secretion system (T2SS), protein K AMD23_RS18310 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS18315 PF12019 Type II transport protein GspH AMD23_RS18320 PF08334 Type II secretion system (T2SS), protein G AMD23_RS18325 PF00482 Type II secretion system (T2SS), protein F AMD23_RS18330 PF00437 Type II/IV secretion system protein AMD23_RS18330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD23_RS18335 PF00082 Subtilase family AMD23_RS18335 PF04151 Bacterial pre-peptidase C-terminal domain AMD23_RS18340 PF05658 Head domain of trimeric autotransporter adhesin AMD23_RS18340 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD23_RS18340 PF03895 YadA-like membrane anchor domain AMD23_RS18340 PF13018 Extended Signal Peptide of Type V secretion system AMD23_RS18345 PF00082 Subtilase family AMD23_RS18345 PF04151 Bacterial pre-peptidase C-terminal domain AMD23_RS18350 PF05658 Head domain of trimeric autotransporter adhesin AMD23_RS18350 PF13018 Extended Signal Peptide of Type V secretion system AMD23_RS18350 PF03895 YadA-like membrane anchor domain AMD23_RS18350 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD23_RS18360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMD23_RS18360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMD23_RS18360 PF02769 AIR synthase related protein, C-terminal domain AMD23_RS18365 PF10411 Disulfide bond isomerase protein N-terminus AMD23_RS18365 PF13098 Thioredoxin-like domain AMD23_RS18370 PF02899 Phage integrase, N-terminal SAM-like domain AMD23_RS18370 PF00589 Phage integrase family AMD23_RS18385 PF03739 Lipopolysaccharide export system permease LptF/LptG AMD23_RS18395 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD23_RS18395 PF00883 Cytosol aminopeptidase family, catalytic domain AMD23_RS18410 PF10458 Valyl tRNA synthetase tRNA binding arm AMD23_RS18410 PF00133 tRNA synthetases class I (I, L, M and V) AMD23_RS18410 PF08264 Anticodon-binding domain of tRNA AMD23_RS18415 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS18415 PF00593 TonB dependent receptor AMD23_RS18420 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AMD23_RS18420 PF01464 Transglycosylase SLT domain AMD23_RS18425 PF00544 Pectate lyase AMD23_RS18440 PF01066 CDP-alcohol phosphatidyltransferase AMD23_RS18450 PF03129 Anticodon binding domain AMD23_RS18450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD23_RS18450 PF04073 Aminoacyl-tRNA editing domain AMD23_RS18455 PF00816 H-NS histone family AMD23_RS18465 PF02405 Permease MlaE AMD23_RS18470 PF00005 ABC transporter AMD23_RS18475 PF03886 ABC-type transport auxiliary lipoprotein component AMD23_RS18475 PF02470 MlaD protein AMD23_RS18495 PF05045 Rhamnan synthesis protein F AMD23_RS18495 PF14307 Glycosyltransferase WbsX AMD23_RS18500 PF01144 Coenzyme A transferase AMD23_RS18505 PF01144 Coenzyme A transferase AMD23_RS18510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD23_RS18510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD23_RS18510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD23_RS18510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD23_RS18515 PF01050 Mannose-6-phosphate isomerase AMD23_RS18515 PF00483 Nucleotidyl transferase AMD23_RS18520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD23_RS18520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD23_RS18520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD23_RS18525 PF04321 RmlD substrate binding domain AMD23_RS18530 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD23_RS18535 PF00483 Nucleotidyl transferase AMD23_RS18540 PF16363 GDP-mannose 4,6 dehydratase AMD23_RS18545 PF01012 Electron transfer flavoprotein domain AMD23_RS18550 PF00766 Electron transfer flavoprotein FAD-binding domain AMD23_RS18550 PF01012 Electron transfer flavoprotein domain AMD23_RS18560 PF01040 UbiA prenyltransferase family AMD23_RS18565 PF04030 D-arabinono-1,4-lactone oxidase AMD23_RS18565 PF01565 FAD binding domain AMD23_RS18570 PF00106 short chain dehydrogenase AMD23_RS18580 PF01370 NAD dependent epimerase/dehydratase family AMD23_RS18585 PF01593 Flavin containing amine oxidoreductase AMD23_RS18610 PF00535 Glycosyl transferase family 2 AMD23_RS18620 PF00005 ABC transporter AMD23_RS18620 PF14524 Wzt C-terminal domain AMD23_RS18630 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD23_RS18635 PF00291 Pyridoxal-phosphate dependent enzyme AMD23_RS18635 PF00571 CBS domain AMD23_RS18655 PF00437 Type II/IV secretion system protein AMD23_RS18665 PF14497 Glutathione S-transferase, C-terminal domain AMD23_RS18665 PF02798 Glutathione S-transferase, N-terminal domain AMD23_RS18675 PF00270 DEAD/DEAH box helicase AMD23_RS18675 PF00271 Helicase conserved C-terminal domain AMD23_RS18685 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS18685 PF00593 TonB dependent receptor AMD23_RS18690 PF01242 6-pyruvoyl tetrahydropterin synthase AMD23_RS18710 PF13185 GAF domain AMD23_RS18720 PF00756 Putative esterase AMD23_RS18725 PF00593 TonB dependent receptor AMD23_RS18725 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS18730 PF13419 Haloacid dehalogenase-like hydrolase AMD23_RS18735 PF00817 impB/mucB/samB family AMD23_RS18735 PF11799 impB/mucB/samB family C-terminal domain AMD23_RS18740 PF07977 FabA-like domain AMD23_RS18745 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD23_RS18745 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD23_RS18755 PF01432 Peptidase family M3 AMD23_RS18770 PF07731 Multicopper oxidase AMD23_RS18770 PF07732 Multicopper oxidase AMD23_RS18770 PF00394 Multicopper oxidase AMD23_RS18775 PF05275 Copper resistance protein B precursor (CopB) AMD23_RS18780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD23_RS18805 PF01380 SIS domain AMD23_RS18810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS18815 PF12704 MacB-like periplasmic core domain AMD23_RS18815 PF00005 ABC transporter AMD23_RS18815 PF02687 FtsX-like permease family AMD23_RS18820 PF12704 MacB-like periplasmic core domain AMD23_RS18820 PF00005 ABC transporter AMD23_RS18820 PF02687 FtsX-like permease family AMD23_RS18825 PF02687 FtsX-like permease family AMD23_RS18825 PF12704 MacB-like periplasmic core domain AMD23_RS18835 PF00072 Response regulator receiver domain AMD23_RS18835 PF02954 Bacterial regulatory protein, Fis family AMD23_RS18835 PF00158 Sigma-54 interaction domain AMD23_RS18840 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS18845 PF00132 Bacterial transferase hexapeptide (six repeats) AMD23_RS18845 PF14602 Hexapeptide repeat of succinyl-transferase AMD23_RS18845 PF12804 MobA-like NTP transferase domain AMD23_RS18860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD23_RS18860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD23_RS18865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD23_RS18865 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD23_RS18870 PF00231 ATP synthase AMD23_RS18875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD23_RS18875 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD23_RS18875 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD23_RS18880 PF00213 ATP synthase delta (OSCP) subunit AMD23_RS18885 PF00430 ATP synthase B/B' CF(0) AMD23_RS18890 PF00137 ATP synthase subunit C AMD23_RS18895 PF00119 ATP synthase A chain AMD23_RS18915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD23_RS18915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS18925 PF00364 Biotin-requiring enzyme AMD23_RS18925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD23_RS18925 PF02817 e3 binding domain AMD23_RS18965 PF03180 NLPA lipoprotein AMD23_RS18970 PF00528 Binding-protein-dependent transport system inner membrane component AMD23_RS18975 PF00005 ABC transporter AMD23_RS18975 PF09383 NIL domain AMD23_RS18980 PF00892 EamA-like transporter family AMD23_RS18985 PF04461 Protein of unknown function (DUF520) AMD23_RS18995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS18995 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS18995 PF00072 Response regulator receiver domain AMD23_RS18995 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMD23_RS18995 PF00989 PAS fold AMD23_RS18995 PF01627 Hpt domain AMD23_RS19020 PF13419 Haloacid dehalogenase-like hydrolase AMD23_RS19025 PF01479 S4 domain AMD23_RS19025 PF00849 RNA pseudouridylate synthase AMD23_RS19030 PF08468 Methyltransferase small domain N-terminal AMD23_RS19030 PF05175 Methyltransferase small domain AMD23_RS19040 PF07995 Glucose / Sorbosone dehydrogenase AMD23_RS19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS19050 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS19050 PF00989 PAS fold AMD23_RS19070 PF00842 Alanine racemase, C-terminal domain AMD23_RS19070 PF01168 Alanine racemase, N-terminal domain AMD23_RS19075 PF01266 FAD dependent oxidoreductase AMD23_RS19080 PF01037 Lrp/AsnC ligand binding domain AMD23_RS19090 PF01641 SelR domain AMD23_RS19100 PF01618 MotA/TolQ/ExbB proton channel family AMD23_RS19105 PF00691 OmpA family AMD23_RS19105 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD23_RS19130 PF01061 ABC-2 type transporter AMD23_RS19135 PF00005 ABC transporter AMD23_RS19140 PF00999 Sodium/hydrogen exchanger family AMD23_RS19145 PF02469 Fasciclin domain AMD23_RS19150 PF03167 Uracil DNA glycosylase superfamily AMD23_RS19160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD23_RS19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS19170 PF03466 LysR substrate binding domain AMD23_RS19175 PF03358 NADPH-dependent FMN reductase AMD23_RS19180 PF00248 Aldo/keto reductase family AMD23_RS19190 PF01431 Peptidase family M13 AMD23_RS19190 PF05649 Peptidase family M13 AMD23_RS19210 PF13520 Amino acid permease AMD23_RS19220 PF04397 LytTr DNA-binding domain AMD23_RS19220 PF00072 Response regulator receiver domain AMD23_RS19225 PF02743 Cache domain AMD23_RS19225 PF00672 HAMP domain AMD23_RS19225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS19225 PF06580 Histidine kinase AMD23_RS19240 PF05974 Domain of unknown function (DUF892) AMD23_RS19245 PF05067 Manganese containing catalase AMD23_RS19265 PF01339 CheB methylesterase AMD23_RS19265 PF01739 CheR methyltransferase, SAM binding domain AMD23_RS19265 PF03705 CheR methyltransferase, all-alpha domain AMD23_RS19265 PF08448 PAS fold AMD23_RS19280 PF00158 Sigma-54 interaction domain AMD23_RS19280 PF02954 Bacterial regulatory protein, Fis family AMD23_RS19280 PF00072 Response regulator receiver domain AMD23_RS19290 PF01654 Cytochrome bd terminal oxidase subunit I AMD23_RS19295 PF02322 Cytochrome bd terminal oxidase subunit II AMD23_RS19315 PF16363 GDP-mannose 4,6 dehydratase AMD23_RS19325 PF03275 UDP-galactopyranose mutase AMD23_RS19335 PF00005 ABC transporter AMD23_RS19335 PF00664 ABC transporter transmembrane region AMD23_RS19350 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS19350 PF13823 Alcohol dehydrogenase GroES-associated AMD23_RS19350 PF00107 Zinc-binding dehydrogenase AMD23_RS19395 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS19395 PF00593 TonB dependent receptor AMD23_RS19410 PF00005 ABC transporter AMD23_RS19420 PF03466 LysR substrate binding domain AMD23_RS19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS19425 PF01042 Endoribonuclease L-PSP AMD23_RS19435 PF01527 Transposase AMD23_RS19455 PF02203 Tar ligand binding domain homologue AMD23_RS19455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD23_RS19455 PF00672 HAMP domain AMD23_RS19470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS19470 PF03466 LysR substrate binding domain AMD23_RS19475 PF02525 Flavodoxin-like fold AMD23_RS19515 PF00557 Metallopeptidase family M24 AMD23_RS19535 PF04539 Sigma-70 region 3 AMD23_RS19535 PF04542 Sigma-70 region 2 AMD23_RS19535 PF00140 Sigma-70 factor, region 1.2 AMD23_RS19535 PF04545 Sigma-70, region 4 AMD23_RS19535 PF04546 Sigma-70, non-essential region AMD23_RS19535 PF03979 Sigma-70 factor, region 1.1 AMD23_RS19540 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD23_RS19545 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD23_RS19560 PF00925 GTP cyclohydrolase II AMD23_RS19580 PF00535 Glycosyl transferase family 2 AMD23_RS19595 PF01189 16S rRNA methyltransferase RsmB/F AMD23_RS19595 PF01029 NusB family AMD23_RS19600 PF02911 Formyl transferase, C-terminal domain AMD23_RS19600 PF00551 Formyl transferase AMD23_RS19605 PF01327 Polypeptide deformylase AMD23_RS19610 PF01476 LysM domain AMD23_RS19615 PF17782 DprA winged helix domain AMD23_RS19615 PF02481 DNA recombination-mediator protein A AMD23_RS19620 PF04361 Protein of unknown function (DUF494) AMD23_RS19625 PF00114 Pilin (bacterial filament) AMD23_RS19625 PF07963 Prokaryotic N-terminal methylation motif AMD23_RS19635 PF13368 Topoisomerase C-terminal repeat AMD23_RS19635 PF01131 DNA topoisomerase AMD23_RS19635 PF01751 Toprim domain AMD23_RS19640 PF01300 Telomere recombination AMD23_RS19665 PF01343 Peptidase family S49 AMD23_RS19670 PF01554 MatE AMD23_RS19690 PF00270 DEAD/DEAH box helicase AMD23_RS19690 PF00271 Helicase conserved C-terminal domain AMD23_RS19690 PF17764 3′ DNA-binding domain (3′BD) AMD23_RS19690 PF18074 Primosomal protein N C-terminal domain AMD23_RS19690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMD23_RS19695 PF00043 Glutathione S-transferase, C-terminal domain AMD23_RS19695 PF13417 Glutathione S-transferase, N-terminal domain AMD23_RS19710 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD23_RS19715 PF03458 UPF0126 domain AMD23_RS19720 PF04542 Sigma-70 region 2 AMD23_RS19720 PF04545 Sigma-70, region 4 AMD23_RS19725 PF03167 Uracil DNA glycosylase superfamily AMD23_RS19730 PF00072 Response regulator receiver domain AMD23_RS19730 PF01339 CheB methylesterase AMD23_RS19735 PF18075 FtsX extracellular domain AMD23_RS19740 PF00005 ABC transporter AMD23_RS19745 PF00270 DEAD/DEAH box helicase AMD23_RS19745 PF00271 Helicase conserved C-terminal domain AMD23_RS19745 PF12300 ATP-dependent RNA helicase RhlB AMD23_RS19750 PF00085 Thioredoxin AMD23_RS19755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD23_RS19755 PF07497 Rho termination factor, RNA-binding domain AMD23_RS19755 PF07498 Rho termination factor, N-terminal domain AMD23_RS19760 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD23_RS19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS19765 PF03466 LysR substrate binding domain AMD23_RS19775 PF03971 Monomeric isocitrate dehydrogenase AMD23_RS19790 PF09704 CRISPR-associated protein (Cas_Cas5) AMD23_RS19810 PF01867 CRISPR associated protein Cas1 AMD23_RS19815 PF09827 CRISPR associated protein Cas2 AMD23_RS19825 PF04972 BON domain AMD23_RS19825 PF01476 LysM domain AMD23_RS19830 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD23_RS19830 PF14489 QueF-like protein AMD23_RS19835 PF07687 Peptidase dimerisation domain AMD23_RS19835 PF01546 Peptidase family M20/M25/M40 AMD23_RS19840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS19845 PF00873 AcrB/AcrD/AcrF family AMD23_RS19850 PF00873 AcrB/AcrD/AcrF family AMD23_RS19855 PF07063 Domain of unknown function (DUF1338) AMD23_RS19895 PF01427 D-ala-D-ala dipeptidase AMD23_RS19900 PF01510 N-acetylmuramoyl-L-alanine amidase AMD23_RS19910 PF13378 Enolase C-terminal domain-like AMD23_RS19910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD23_RS19920 PF13520 Amino acid permease AMD23_RS19935 PF05360 yiaA/B two helix domain AMD23_RS19940 PF07995 Glucose / Sorbosone dehydrogenase AMD23_RS19945 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD23_RS19945 PF14310 Fibronectin type III-like domain AMD23_RS19945 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD23_RS19950 PF02152 Dihydroneopterin aldolase AMD23_RS19955 PF00814 Glycoprotease family AMD23_RS19960 PF01165 Ribosomal protein S21 AMD23_RS19965 PF09424 Yqey-like protein AMD23_RS19970 PF03631 Virulence factor BrkB AMD23_RS19975 PF10410 DnaB-helicase binding domain of primase AMD23_RS19975 PF01807 CHC2 zinc finger AMD23_RS19975 PF08275 DNA primase catalytic core, N-terminal domain AMD23_RS19975 PF08278 DNA primase DnaG DnaB-binding AMD23_RS19980 PF13593 SBF-like CPA transporter family (DUF4137) AMD23_RS19990 PF01040 UbiA prenyltransferase family AMD23_RS20015 PF00510 Cytochrome c oxidase subunit III AMD23_RS20020 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD23_RS20025 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD23_RS20030 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMD23_RS20030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD23_RS20040 PF14850 DNA-binding domain of Proline dehydrogenase AMD23_RS20040 PF00171 Aldehyde dehydrogenase family AMD23_RS20040 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD23_RS20040 PF01619 Proline dehydrogenase AMD23_RS20075 PF00579 tRNA synthetases class I (W and Y) AMD23_RS20080 PF01551 Peptidase family M23 AMD23_RS20080 PF04225 Opacity-associated protein A LysM-like domain AMD23_RS20085 PF03702 Anhydro-N-acetylmuramic acid kinase AMD23_RS20095 PF07690 Major Facilitator Superfamily AMD23_RS20100 PF03372 Endonuclease/Exonuclease/phosphatase family AMD23_RS20105 PF00156 Phosphoribosyl transferase domain AMD23_RS20115 PF13614 AAA domain AMD23_RS20120 PF17762 HTH domain found in ParB protein AMD23_RS20120 PF02195 ParB-like nuclease domain AMD23_RS20130 PF01370 NAD dependent epimerase/dehydratase family AMD23_RS20135 PF00535 Glycosyl transferase family 2 AMD23_RS20150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD23_RS20150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD23_RS20150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD23_RS20150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD23_RS20155 PF00692 dUTPase AMD23_RS20160 PF04127 DNA / pantothenate metabolism flavoprotein AMD23_RS20160 PF02441 Flavoprotein AMD23_RS20165 PF04002 RadC-like JAB domain AMD23_RS20170 PF00750 tRNA synthetases class I (R) AMD23_RS20170 PF05746 DALR anticodon binding domain AMD23_RS20170 PF03485 Arginyl tRNA synthetase N terminal domain AMD23_RS20185 PF00106 short chain dehydrogenase AMD23_RS20190 PF01757 Acyltransferase family AMD23_RS20195 PF03033 Glycosyltransferase family 28 N-terminal domain AMD23_RS20200 PF00550 Phosphopantetheine attachment site AMD23_RS20200 PF00501 AMP-binding enzyme AMD23_RS20200 PF00668 Condensation domain AMD23_RS20200 PF00975 Thioesterase domain AMD23_RS20200 PF13193 AMP-binding enzyme C-terminal domain AMD23_RS20210 PF17810 Arginine decarboxylase helical bundle domain AMD23_RS20210 PF17944 Arginine decarboxylase C-terminal helical extension AMD23_RS20210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD23_RS20215 PF17284 Spermidine synthase tetramerisation domain AMD23_RS20245 PF00543 Nitrogen regulatory protein P-II AMD23_RS20250 PF04380 Membrane fusogenic activity AMD23_RS20255 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMD23_RS20255 PF01078 Magnesium chelatase, subunit ChlI AMD23_RS20270 PF00563 EAL domain AMD23_RS20270 PF12792 CSS motif domain associated with EAL AMD23_RS20275 PF00487 Fatty acid desaturase AMD23_RS20280 PF00175 Oxidoreductase NAD-binding domain AMD23_RS20280 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD23_RS20280 PF00970 Oxidoreductase FAD-binding domain AMD23_RS20285 PF00440 Bacterial regulatory proteins, tetR family AMD23_RS20305 PF01139 tRNA-splicing ligase RtcB AMD23_RS20345 PF01370 NAD dependent epimerase/dehydratase family AMD23_RS20345 PF08338 Domain of unknown function (DUF1731) AMD23_RS20350 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS20350 PF00072 Response regulator receiver domain AMD23_RS20355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS20355 PF08521 Two-component sensor kinase N-terminal AMD23_RS20355 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS20375 PF00595 PDZ domain AMD23_RS20395 PF01594 AI-2E family transporter AMD23_RS20400 PF13419 Haloacid dehalogenase-like hydrolase AMD23_RS20405 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD23_RS20405 PF00883 Cytosol aminopeptidase family, catalytic domain AMD23_RS20415 PF08281 Sigma-70, region 4 AMD23_RS20415 PF04542 Sigma-70 region 2 AMD23_RS20420 PF00199 Catalase AMD23_RS20435 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS20435 PF00072 Response regulator receiver domain AMD23_RS20440 PF07730 Histidine kinase AMD23_RS20445 PF13533 Biotin-lipoyl like AMD23_RS20450 PF00005 ABC transporter AMD23_RS20475 PF00892 EamA-like transporter family AMD23_RS20490 PF00753 Metallo-beta-lactamase superfamily AMD23_RS20495 PF00579 tRNA synthetases class I (W and Y) AMD23_RS20500 PF05532 CsbD-like AMD23_RS20515 PF00491 Arginase family AMD23_RS20540 PF02223 Thymidylate kinase AMD23_RS20555 PF03309 Type III pantothenate kinase AMD23_RS20560 PF02237 Biotin protein ligase C terminal domain AMD23_RS20560 PF03099 Biotin/lipoate A/B protein ligase family AMD23_RS20560 PF08279 HTH domain AMD23_RS20570 PF06167 Glucose-regulated metallo-peptidase M90 AMD23_RS20585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS20590 PF00072 Response regulator receiver domain AMD23_RS20590 PF00486 Transcriptional regulatory protein, C terminal AMD23_RS20600 PF01207 Dihydrouridine synthase (Dus) AMD23_RS20620 PF13307 Helicase C-terminal domain AMD23_RS20620 PF06733 DEAD_2 AMD23_RS20635 PF01488 Shikimate / quinate 5-dehydrogenase AMD23_RS20635 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMD23_RS20635 PF08501 Shikimate dehydrogenase substrate binding domain AMD23_RS20645 PF00175 Oxidoreductase NAD-binding domain AMD23_RS20645 PF00667 FAD binding domain AMD23_RS20645 PF00258 Flavodoxin AMD23_RS20655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS20655 PF03466 LysR substrate binding domain AMD23_RS20665 PF00490 Delta-aminolevulinic acid dehydratase AMD23_RS20690 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD23_RS20690 PF00326 Prolyl oligopeptidase family AMD23_RS20695 PF02798 Glutathione S-transferase, N-terminal domain AMD23_RS20695 PF00043 Glutathione S-transferase, C-terminal domain AMD23_RS20720 PF04820 Tryptophan halogenase AMD23_RS20735 PF00005 ABC transporter AMD23_RS20745 PF01381 Helix-turn-helix AMD23_RS20755 PF01229 Glycosyl hydrolases family 39 AMD23_RS20760 PF02583 Metal-sensitive transcriptional repressor AMD23_RS20765 PF16916 Dimerisation domain of Zinc Transporter AMD23_RS20765 PF01545 Cation efflux family AMD23_RS20775 PF00593 TonB dependent receptor AMD23_RS20775 PF07715 TonB-dependent Receptor Plug Domain AMD23_RS20785 PF12833 Helix-turn-helix domain AMD23_RS20785 PF01965 DJ-1/PfpI family AMD23_RS20790 PF00175 Oxidoreductase NAD-binding domain AMD23_RS20790 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD23_RS20790 PF00970 Oxidoreductase FAD-binding domain AMD23_RS20795 PF00005 ABC transporter AMD23_RS20800 PF01061 ABC-2 type transporter AMD23_RS20810 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD23_RS20810 PF02558 Ketopantoate reductase PanE/ApbA AMD23_RS20840 PF00268 Ribonucleotide reductase, small chain AMD23_RS20845 PF00317 Ribonucleotide reductase, all-alpha domain AMD23_RS20845 PF03477 ATP cone domain AMD23_RS20845 PF02867 Ribonucleotide reductase, barrel domain AMD23_RS20855 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD23_RS20855 PF13380 CoA binding domain AMD23_RS20855 PF00583 Acetyltransferase (GNAT) family AMD23_RS20860 PF03448 MgtE intracellular N domain AMD23_RS20860 PF00571 CBS domain AMD23_RS20860 PF01769 Divalent cation transporter AMD23_RS20865 PF00194 Eukaryotic-type carbonic anhydrase AMD23_RS20870 PF00999 Sodium/hydrogen exchanger family AMD23_RS20870 PF02254 TrkA-N domain AMD23_RS20875 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD23_RS20875 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD23_RS20880 PF00723 Glycosyl hydrolases family 15 AMD23_RS20895 PF05166 YcgL domain AMD23_RS20900 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD23_RS20900 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD23_RS20910 PF00535 Glycosyl transferase family 2 AMD23_RS20965 PF07977 FabA-like domain AMD23_RS20970 PF01553 Acyltransferase AMD23_RS20980 PF00550 Phosphopantetheine attachment site AMD23_RS20985 PF04820 Tryptophan halogenase AMD23_RS21005 PF00326 Prolyl oligopeptidase family AMD23_RS21005 PF07676 WD40-like Beta Propeller Repeat AMD23_RS21020 PF01218 Coproporphyrinogen III oxidase AMD23_RS21025 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD23_RS21025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD23_RS21025 PF00476 DNA polymerase family A AMD23_RS21025 PF01612 3'-5' exonuclease AMD23_RS21035 PF06812 ImpA, N-terminal, type VI secretion system AMD23_RS21055 PF03793 PASTA domain AMD23_RS21055 PF00069 Protein kinase domain AMD23_RS21070 PF14331 ImcF-related N-terminal domain AMD23_RS21070 PF06744 Type VI secretion protein IcmF C-terminal AMD23_RS21070 PF06761 Intracellular multiplication and human macrophage-killing AMD23_RS21080 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AMD23_RS21095 PF04717 Type VI secretion system, phage-baseplate injector AMD23_RS21110 PF03793 PASTA domain AMD23_RS21110 PF00069 Protein kinase domain AMD23_RS21120 PF04542 Sigma-70 region 2 AMD23_RS21120 PF08281 Sigma-70, region 4 AMD23_RS21135 PF00328 Histidine phosphatase superfamily (branch 2) AMD23_RS21165 PF17871 AAA lid domain AMD23_RS21165 PF10431 C-terminal, D2-small domain, of ClpB protein AMD23_RS21165 PF07724 AAA domain (Cdc48 subfamily) AMD23_RS21165 PF00004 ATPase family associated with various cellular activities (AAA) AMD23_RS21175 PF05947 Type VI secretion system, TssF AMD23_RS21180 PF04965 Gene 25-like lysozyme AMD23_RS21185 PF07024 ImpE protein AMD23_RS21190 PF05638 Type VI secretion system effector, Hcp AMD23_RS21195 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMD23_RS21200 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AMD23_RS21215 PF12464 Maltose acetyltransferase AMD23_RS21215 PF14602 Hexapeptide repeat of succinyl-transferase AMD23_RS21220 PF00580 UvrD/REP helicase N-terminal domain AMD23_RS21220 PF13361 UvrD-like helicase C-terminal domain AMD23_RS21235 PF13091 PLD-like domain AMD23_RS21235 PF13396 Phospholipase_D-nuclease N-terminal AMD23_RS21240 PF03466 LysR substrate binding domain AMD23_RS21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS21245 PF03737 Aldolase/RraA AMD23_RS21250 PF04303 PrpF protein AMD23_RS21255 PF04909 Amidohydrolase AMD23_RS21260 PF00471 Ribosomal protein L33 AMD23_RS21265 PF00830 Ribosomal L28 family AMD23_RS21270 PF00873 AcrB/AcrD/AcrF family AMD23_RS21275 PF13533 Biotin-lipoyl like AMD23_RS21295 PF02527 rRNA small subunit methyltransferase G AMD23_RS21300 PF16655 PhoD-like phosphatase, N-terminal domain AMD23_RS21300 PF09423 PhoD-like phosphatase AMD23_RS21305 PF16655 PhoD-like phosphatase, N-terminal domain AMD23_RS21305 PF09423 PhoD-like phosphatase AMD23_RS21310 PF01648 4'-phosphopantetheinyl transferase superfamily AMD23_RS21320 PF04226 Transglycosylase associated protein AMD23_RS21330 PF03372 Endonuclease/Exonuclease/phosphatase family AMD23_RS21335 PF00480 ROK family AMD23_RS21345 PF09312 SurA N-terminal domain AMD23_RS21355 PF00474 Sodium:solute symporter family AMD23_RS21360 PF04341 Protein of unknown function, DUF485 AMD23_RS21370 PF13193 AMP-binding enzyme C-terminal domain AMD23_RS21370 PF00501 AMP-binding enzyme AMD23_RS21370 PF16177 Acetyl-coenzyme A synthetase N-terminus AMD23_RS21375 PF00196 Bacterial regulatory proteins, luxR family AMD23_RS21375 PF00072 Response regulator receiver domain AMD23_RS21400 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD23_RS21400 PF04616 Glycosyl hydrolases family 43 AMD23_RS21410 PF00248 Aldo/keto reductase family AMD23_RS21425 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD23_RS21430 PF13378 Enolase C-terminal domain-like AMD23_RS21430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD23_RS21440 PF05336 L-rhamnose mutarotase AMD23_RS21445 PF07690 Major Facilitator Superfamily AMD23_RS21450 PF09339 IclR helix-turn-helix domain AMD23_RS21450 PF01614 Bacterial transcriptional regulator AMD23_RS21455 PF02659 Putative manganese efflux pump AMD23_RS21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS21460 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS21475 PF06165 Glycosyltransferase family 36 AMD23_RS21475 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AMD23_RS21490 PF01011 PQQ enzyme repeat AMD23_RS21490 PF13570 PQQ-like domain AMD23_RS21490 PF13360 PQQ-like domain AMD23_RS21510 PF04357 TamB, inner membrane protein subunit of TAM complex AMD23_RS21515 PF01103 Surface antigen AMD23_RS21515 PF17243 POTRA domain TamA domain 1 AMD23_RS21545 PF03412 Peptidase C39 family AMD23_RS21545 PF00005 ABC transporter AMD23_RS21545 PF00664 ABC transporter transmembrane region AMD23_RS21550 PF05746 DALR anticodon binding domain AMD23_RS21550 PF02092 Glycyl-tRNA synthetase beta subunit AMD23_RS21555 PF02091 Glycyl-tRNA synthetase alpha subunit AMD23_RS21560 PF00437 Type II/IV secretion system protein AMD23_RS21560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD23_RS21570 PF00117 Glutamine amidotransferase class-I AMD23_RS21570 PF00958 GMP synthase C terminal domain AMD23_RS21580 PF00902 Sec-independent protein translocase protein (TatC) AMD23_RS21585 PF02416 mttA/Hcf106 family AMD23_RS21590 PF02416 mttA/Hcf106 family AMD23_RS21600 PF00762 Ferrochelatase AMD23_RS21605 PF12697 Alpha/beta hydrolase family AMD23_RS21620 PF04381 Putative exonuclease, RdgC AMD23_RS21625 PF01171 PP-loop family AMD23_RS21635 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS21640 PF07488 Glycosyl hydrolase family 67 middle domain AMD23_RS21640 PF07477 Glycosyl hydrolase family 67 C-terminus AMD23_RS21640 PF03648 Glycosyl hydrolase family 67 N-terminus AMD23_RS21650 PF13378 Enolase C-terminal domain-like AMD23_RS21650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD23_RS21655 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD23_RS21655 PF04616 Glycosyl hydrolases family 43 AMD23_RS21660 PF14310 Fibronectin type III-like domain AMD23_RS21660 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD23_RS21660 PF07691 PA14 domain AMD23_RS21660 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD23_RS21665 PF08125 Mannitol dehydrogenase C-terminal domain AMD23_RS21665 PF01232 Mannitol dehydrogenase Rossmann domain AMD23_RS21690 PF00171 Aldehyde dehydrogenase family AMD23_RS21715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD23_RS21715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD23_RS21740 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD23_RS21745 PF00331 Glycosyl hydrolase family 10 AMD23_RS21750 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD23_RS21750 PF16355 Domain of unknown function (DUF4982) AMD23_RS21750 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD23_RS21750 PF00703 Glycosyl hydrolases family 2 AMD23_RS21750 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD23_RS21755 PF02614 Glucuronate isomerase AMD23_RS21760 PF00553 Cellulose binding domain AMD23_RS21760 PF00331 Glycosyl hydrolase family 10 AMD23_RS21760 PF03422 Carbohydrate binding module (family 6) AMD23_RS21775 PF00331 Glycosyl hydrolase family 10 AMD23_RS21775 PF03422 Carbohydrate binding module (family 6) AMD23_RS21775 PF00553 Cellulose binding domain AMD23_RS21795 PF04616 Glycosyl hydrolases family 43 AMD23_RS21830 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD23_RS21830 PF16197 Ketoacyl-synthetase C-terminal extension AMD23_RS21830 PF00107 Zinc-binding dehydrogenase AMD23_RS21830 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS21830 PF00698 Acyl transferase domain AMD23_RS21830 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD23_RS21830 PF08659 KR domain AMD23_RS21830 PF00550 Phosphopantetheine attachment site AMD23_RS21830 PF14765 Polyketide synthase dehydratase AMD23_RS21835 PF01553 Acyltransferase AMD23_RS21845 PF00356 Bacterial regulatory proteins, lacI family AMD23_RS21865 PF04820 Tryptophan halogenase AMD23_RS21870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD23_RS21875 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD23_RS21880 PF04337 Protein of unknown function, DUF480 AMD23_RS21895 PF00580 UvrD/REP helicase N-terminal domain AMD23_RS21895 PF13361 UvrD-like helicase C-terminal domain AMD23_RS21900 PF00265 Thymidine kinase AMD23_RS21905 PF00360 Phytochrome region AMD23_RS21905 PF08446 PAS fold AMD23_RS21905 PF00512 His Kinase A (phospho-acceptor) domain AMD23_RS21905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD23_RS21905 PF01590 GAF domain AMD23_RS21910 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD23_RS21920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD23_RS21920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD23_RS21920 PF06827 Zinc finger found in FPG and IleRS AMD23_RS21955 PF03594 Benzoate membrane transport protein AMD23_RS21960 PF08446 PAS fold AMD23_RS21960 PF13426 PAS domain AMD23_RS21960 PF00360 Phytochrome region AMD23_RS21960 PF01590 GAF domain AMD23_RS21965 PF01126 Heme oxygenase AMD23_RS21970 PF07690 Major Facilitator Superfamily AMD23_RS21975 PF01263 Aldose 1-epimerase AMD23_RS21985 PF02810 SEC-C motif AMD23_RS21990 PF01925 Sulfite exporter TauE/SafE AMD23_RS22010 PF01227 GTP cyclohydrolase I AMD23_RS22020 PF07869 Protein of unknown function (DUF1656) AMD23_RS22025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD23_RS22025 PF00529 HlyD membrane-fusion protein of T1SS AMD23_RS22030 PF02321 Outer membrane efflux protein AMD23_RS22035 PF04632 Fusaric acid resistance protein family AMD23_RS22040 PF00083 Sugar (and other) transporter AMD23_RS22045 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD23_RS22050 PF13091 PLD-like domain AMD23_RS22050 PF13396 Phospholipase_D-nuclease N-terminal AMD23_RS22075 PF01850 PIN domain AMD23_RS22100 PF00849 RNA pseudouridylate synthase AMD23_RS22135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD23_RS22135 PF00289 Biotin carboxylase, N-terminal domain AMD23_RS22135 PF02785 Biotin carboxylase C-terminal domain AMD23_RS22140 PF01425 Amidase AMD23_RS22170 PF13538 UvrD-like helicase C-terminal domain AMD23_RS22175 PF12705 PD-(D/E)XK nuclease superfamily AMD23_RS22175 PF00580 UvrD/REP helicase N-terminal domain AMD23_RS22175 PF13361 UvrD-like helicase C-terminal domain AMD23_RS22180 PF17946 RecC C-terminal domain AMD23_RS22195 PF00005 ABC transporter AMD23_RS22200 PF02405 Permease MlaE AMD23_RS22205 PF02470 MlaD protein AMD23_RS22210 PF05494 MlaC protein AMD23_RS22220 PF04333 MlaA lipoprotein AMD23_RS22230 PF00255 Glutathione peroxidase AMD23_RS22240 PF02646 RmuC family AMD23_RS22245 PF00107 Zinc-binding dehydrogenase AMD23_RS22245 PF08240 Alcohol dehydrogenase GroES-like domain AMD23_RS22250 PF03466 LysR substrate binding domain AMD23_RS22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD23_RS22260 PF00043 Glutathione S-transferase, C-terminal domain AMD23_RS22260 PF13417 Glutathione S-transferase, N-terminal domain AMD23_RS22270 PF13520 Amino acid permease AMD23_RS22275 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD23_RS22275 PF07971 Glycosyl hydrolase family 92 AMD23_RS22280 PF10947 Protein of unknown function (DUF2628) AMD23_RS22285 PF00990 Diguanylate cyclase, GGDEF domain AMD23_RS22290 PF13556 PucR C-terminal helix-turn-helix domain AMD23_RS22290 PF17853 GGDEF-like domain AMD23_RS22290 PF05651 Putative sugar diacid recognition AMD23_RS22295 PF02595 Glycerate kinase family AMD23_RS22300 PF07690 Major Facilitator Superfamily AMD23_RS22315 PF10672 S-adenosylmethionine-dependent methyltransferase AMD23_RS22315 PF17785 PUA-like domain AMD23_RS22320 PF03741 Integral membrane protein TerC family AMD23_RS22325 PF01694 Rhomboid family AMD23_RS22330 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD23_RS22340 PF01569 PAP2 superfamily AMD23_RS22345 PF01926 50S ribosome-binding GTPase AMD23_RS22345 PF12631 MnmE helical domain AMD23_RS22345 PF10396 GTP-binding protein TrmE N-terminus AMD23_RS22350 PF01522 Polysaccharide deacetylase AMD23_RS22360 PF14849 YidC periplasmic domain AMD23_RS22360 PF02096 60Kd inner membrane protein AMD23_RS22365 PF00825 Ribonuclease P AMD23_RS22370 PF00468 Ribosomal protein L34