AMD22_RS00065 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) AMD22_RS00065 PF13181 Tetratricopeptide repeat AMD22_RS00220 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) AMD22_RS00235 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD22_RS00310 PF00150 Cellulase (glycosyl hydrolase family 5) AMD22_RS00370 PF01493 GXGXG motif AMD22_RS00380 PF00310 Glutamine amidotransferases class-II AMD22_RS00475 PF00733 Asparagine synthase AMD22_RS00500 PF00308 Bacterial dnaA protein AMD22_RS00500 PF08299 Bacterial dnaA protein helix-turn-helix AMD22_RS00500 PF11638 DnaA N-terminal domain AMD22_RS00505 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD22_RS00505 PF02767 DNA polymerase III beta subunit, central domain AMD22_RS00505 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD22_RS00510 PF02463 RecF/RecN/SMC N terminal domain AMD22_RS00515 PF00204 DNA gyrase B AMD22_RS00515 PF00986 DNA gyrase B subunit, carboxyl terminus AMD22_RS00515 PF01751 Toprim domain AMD22_RS00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS00520 PF02517 CAAX protease self-immunity AMD22_RS00525 PF01435 Peptidase family M48 AMD22_RS00530 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) AMD22_RS00535 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS00540 PF01618 AMD22_RS00540 AMD22_RS00545 PF02472 Biopolymer transport protein ExbD/TolR AMD22_RS00550 PF02472 Biopolymer transport protein ExbD/TolR AMD22_RS00555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD22_RS00565 PF13091 PLD-like domain AMD22_RS00580 PF04055 Radical SAM superfamily AMD22_RS00585 PF13640 2OG-Fe(II) oxygenase superfamily AMD22_RS00590 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD22_RS00595 PF01694 Rhomboid family AMD22_RS00600 PF08850 AMD22_RS00600 AMD22_RS00605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD22_RS00605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD22_RS00610 PF03572 Peptidase family S41 AMD22_RS00610 PF13180 PDZ domain AMD22_RS00615 PF01551 Peptidase family M23 AMD22_RS00625 PF04389 Peptidase family M28 AMD22_RS00630 PF13670 AMD22_RS00630 AMD22_RS00635 PF00150 Cellulase (glycosyl hydrolase family 5) AMD22_RS00640 PF00150 Cellulase (glycosyl hydrolase family 5) AMD22_RS00645 PF00150 Cellulase (glycosyl hydrolase family 5) AMD22_RS00650 PF00107 Zinc-binding dehydrogenase AMD22_RS00650 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS00655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD22_RS00660 PF00310 Glutamine amidotransferases class-II AMD22_RS00660 PF01493 GXGXG motif AMD22_RS00660 PF01645 Conserved region in glutamate synthase AMD22_RS00660 PF04898 Glutamate synthase central domain AMD22_RS00665 PF11720 Peptidase inhibitor I78 family AMD22_RS00670 PF01028 Eukaryotic DNA topoisomerase I, catalytic core AMD22_RS00685 PF05368 NmrA-like family AMD22_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS00690 PF03466 LysR substrate binding domain AMD22_RS00695 PF00534 Glycosyl transferases group 1 AMD22_RS00695 PF13439 Glycosyltransferase Family 4 AMD22_RS00700 PF00534 Glycosyl transferases group 1 AMD22_RS00700 PF13439 Glycosyltransferase Family 4 AMD22_RS00705 PF02397 AMD22_RS00705 AMD22_RS00705 PF13727 CoA-binding domain AMD22_RS00710 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD22_RS00715 PF04932 AMD22_RS00715 AMD22_RS00720 PF03808 AMD22_RS00720 AMD22_RS00725 PF13439 Glycosyltransferase Family 4 AMD22_RS00725 PF13692 Glycosyl transferases group 1 AMD22_RS00740 PF13489 Methyltransferase domain AMD22_RS00745 PF00733 Asparagine synthase AMD22_RS00745 PF13537 Glutamine amidotransferase domain AMD22_RS00755 PF05711 Macrocin-O-methyltransferase (TylF) AMD22_RS00760 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS00770 PF01943 AMD22_RS00770 AMD22_RS00770 PF14667 Polysaccharide biosynthesis C-terminal domain AMD22_RS00775 PF00005 ABC transporter AMD22_RS00775 PF00664 ABC transporter transmembrane region AMD22_RS00780 PF13471 AMD22_RS00780 AMD22_RS00790 PF00733 Asparagine synthase AMD22_RS00790 PF13537 Glutamine amidotransferase domain AMD22_RS00795 PF13847 Methyltransferase domain AMD22_RS00800 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD22_RS00810 PF00685 Sulfotransferase domain AMD22_RS00815 PF13673 Acetyltransferase (GNAT) domain AMD22_RS00820 PF07484 Phage Tail Collar Domain AMD22_RS00825 PF07484 Phage Tail Collar Domain AMD22_RS00830 PF07484 Phage Tail Collar Domain AMD22_RS00835 PF14907 Uncharacterised nucleotidyltransferase AMD22_RS00840 PF03965 Penicillinase repressor AMD22_RS00845 PF05569 BlaR1 peptidase M56 AMD22_RS00855 PF03435 Saccharopine dehydrogenase AMD22_RS00860 PF08975 Domain of unknown function (DUF1868) AMD22_RS00865 PF00593 TonB dependent receptor AMD22_RS00865 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS00870 PF00480 ROK family AMD22_RS00875 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD22_RS00880 PF13482 RNase_H superfamily AMD22_RS00885 PF00270 DEAD/DEAH box helicase AMD22_RS00885 PF00271 Helicase conserved C-terminal domain AMD22_RS00885 PF09369 AMD22_RS00885 AMD22_RS00890 PF03006 AMD22_RS00890 AMD22_RS00895 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD22_RS00900 PF05016 Plasmid stabilisation system protein AMD22_RS00905 PF00106 short chain dehydrogenase AMD22_RS00910 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS00915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS00915 PF03466 LysR substrate binding domain AMD22_RS00920 PF14305 AMD22_RS00920 AMD22_RS00930 PF02525 Flavodoxin-like fold AMD22_RS00935 PF01527 Transposase AMD22_RS00945 PF13333 AMD22_RS00945 AMD22_RS00955 PF01609 Transposase DDE domain AMD22_RS00990 PF05532 CsbD-like AMD22_RS00995 PF08668 HDOD domain AMD22_RS01000 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD22_RS01010 PF01447 Thermolysin metallopeptidase, catalytic domain AMD22_RS01010 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD22_RS01015 PF13460 NADH(P)-binding AMD22_RS01020 PF00293 NUDIX domain AMD22_RS01025 PF01435 Peptidase family M48 AMD22_RS01035 PF10116 AMD22_RS01035 AMD22_RS01040 PF00085 Thioredoxin AMD22_RS01050 PF00083 Sugar (and other) transporter AMD22_RS01055 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD22_RS01060 PF12787 AMD22_RS01060 AMD22_RS01065 PF06080 AMD22_RS01065 AMD22_RS01080 PF07584 AMD22_RS01080 AMD22_RS01085 PF01882 AMD22_RS01085 AMD22_RS01090 PF07726 ATPase family associated with various cellular activities (AAA) AMD22_RS01095 PF13709 Domain of unknown function (DUF4159) AMD22_RS01100 PF01523 Putative modulator of DNA gyrase AMD22_RS01105 PF01523 Putative modulator of DNA gyrase AMD22_RS01110 PF01523 Putative modulator of DNA gyrase AMD22_RS01120 PF00316 Fructose-1-6-bisphosphatase AMD22_RS01125 PF00155 Aminotransferase class I and II AMD22_RS01130 PF00593 TonB dependent receptor AMD22_RS01130 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS01140 PF07883 Cupin domain AMD22_RS01145 PF00171 Aldehyde dehydrogenase family AMD22_RS01150 PF05610 AMD22_RS01150 AMD22_RS01165 PF02735 Ku70/Ku80 beta-barrel domain AMD22_RS01170 PF01070 FMN-dependent dehydrogenase AMD22_RS01180 PF00144 Beta-lactamase AMD22_RS01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS01185 PF07730 Histidine kinase AMD22_RS01190 PF00072 Response regulator receiver domain AMD22_RS01190 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS01210 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS01210 PF13191 AAA ATPase domain AMD22_RS01215 PF07055 Enoyl reductase FAD binding domain AMD22_RS01215 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD22_RS01215 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD22_RS01225 PF00294 pfkB family carbohydrate kinase AMD22_RS01230 PF00593 TonB dependent receptor AMD22_RS01230 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS01235 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD22_RS01250 PF13619 AMD22_RS01250 AMD22_RS01255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMD22_RS01260 PF01609 Transposase DDE domain AMD22_RS01280 PF01527 Transposase AMD22_RS01285 PF00665 Integrase core domain AMD22_RS01285 PF13276 AMD22_RS01285 AMD22_RS01290 PF00128 Alpha amylase, catalytic domain AMD22_RS01290 PF11896 Domain of unknown function (DUF3416) AMD22_RS01295 PF00128 Alpha amylase, catalytic domain AMD22_RS01295 PF16657 AMD22_RS01295 AMD22_RS01300 PF00128 Alpha amylase, catalytic domain AMD22_RS01300 PF02806 Alpha amylase, C-terminal all-beta domain AMD22_RS01300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD22_RS01305 PF12850 Calcineurin-like phosphoesterase superfamily domain AMD22_RS01310 PF00248 Aldo/keto reductase family AMD22_RS01315 PF00135 Carboxylesterase family AMD22_RS01320 PF07859 alpha/beta hydrolase fold AMD22_RS01330 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD22_RS01335 PF04290 AMD22_RS01335 AMD22_RS01340 PF06808 AMD22_RS01340 AMD22_RS01345 PF04616 Glycosyl hydrolases family 43 AMD22_RS01350 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS01350 PF13377 Periplasmic binding protein-like domain AMD22_RS01355 PF04962 KduI/IolB family AMD22_RS01360 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS01365 PF02502 Ribose/Galactose Isomerase AMD22_RS01365 PF12408 Ribose-5-phosphate isomerase AMD22_RS01370 PF07883 Cupin domain AMD22_RS01370 PF13472 GDSL-like Lipase/Acylhydrolase family AMD22_RS01375 PF05299 M61 glycyl aminopeptidase AMD22_RS01380 PF14300 Domain of unknown function (DUF4375) AMD22_RS01385 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD22_RS01390 PF01037 AsnC family AMD22_RS01390 PF13404 AsnC-type helix-turn-helix domain AMD22_RS01395 PF00593 TonB dependent receptor AMD22_RS01395 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS01400 PF01734 Patatin-like phospholipase AMD22_RS01405 PF01987 Mitochondrial biogenesis AIM24 AMD22_RS01410 PF00005 ABC transporter AMD22_RS01415 PF00487 AMD22_RS01415 AMD22_RS01420 PF13202 EF hand AMD22_RS01425 PF00005 ABC transporter AMD22_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS01430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMD22_RS01435 PF00266 Aminotransferase class-V AMD22_RS01440 PF03781 Sulfatase-modifying factor enzyme 1 AMD22_RS01440 PF12867 DinB superfamily AMD22_RS01445 PF10017 AMD22_RS01445 AMD22_RS01450 PF11625 Protein of unknown function (DUF3253) AMD22_RS01455 PF07805 HipA-like N-terminal domain AMD22_RS01455 PF13657 HipA N-terminal domain AMD22_RS01460 PF13560 Helix-turn-helix domain AMD22_RS01465 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMD22_RS01475 PF03547 AMD22_RS01475 AMD22_RS01485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD22_RS01490 PF00300 Histidine phosphatase superfamily (branch 1) AMD22_RS01495 PF04264 YceI-like domain AMD22_RS01500 PF13091 PLD-like domain AMD22_RS01505 PF03061 Thioesterase superfamily AMD22_RS01510 PF01553 Acyltransferase AMD22_RS01515 PF12146 Putative lysophospholipase AMD22_RS01525 PF13432 Tetratricopeptide repeat AMD22_RS01530 PF01161 Phosphatidylethanolamine-binding protein AMD22_RS01535 PF00107 Zinc-binding dehydrogenase AMD22_RS01535 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS01540 PF03724 META domain AMD22_RS01540 PF14302 AMD22_RS01540 AMD22_RS01545 PF02673 AMD22_RS01545 AMD22_RS01550 PF00120 Glutamine synthetase, catalytic domain AMD22_RS01550 PF03951 Glutamine synthetase, beta-Grasp domain AMD22_RS01555 PF00543 Nitrogen regulatory protein P-II AMD22_RS01560 PF00909 Ammonium Transporter Family AMD22_RS01565 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS01570 PF00072 Response regulator receiver domain AMD22_RS01570 PF00158 Sigma-54 interaction domain AMD22_RS01570 PF02954 Bacterial regulatory protein, Fis family AMD22_RS01575 PF00080 Copper/zinc superoxide dismutase (SODC) AMD22_RS01580 PF00080 Copper/zinc superoxide dismutase (SODC) AMD22_RS01585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS01595 PF00108 Thiolase, N-terminal domain AMD22_RS01595 PF02803 Thiolase, C-terminal domain AMD22_RS01600 PF07219 AMD22_RS01600 AMD22_RS01605 PF04375 AMD22_RS01605 AMD22_RS01610 PF02602 Uroporphyrinogen-III synthase HemD AMD22_RS01615 PF01755 AMD22_RS01615 AMD22_RS01620 PF09500 Putative thioesterase (yiiD_Cterm) AMD22_RS01630 PF00581 Rhodanese-like domain AMD22_RS01635 PF02556 Preprotein translocase subunit SecB AMD22_RS01640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD22_RS01640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD22_RS01645 PF13505 Outer membrane protein beta-barrel domain AMD22_RS01650 PF00205 Thiamine pyrophosphate enzyme, central domain AMD22_RS01650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD22_RS01650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD22_RS01655 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS01660 PF00072 Response regulator receiver domain AMD22_RS01660 PF00158 Sigma-54 interaction domain AMD22_RS01660 PF02954 Bacterial regulatory protein, Fis family AMD22_RS01675 PF07690 Major Facilitator Superfamily AMD22_RS01680 PF00588 SpoU rRNA Methylase family AMD22_RS01690 PF13698 AMD22_RS01690 AMD22_RS01695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD22_RS01695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD22_RS01700 PF02661 Fic/DOC family AMD22_RS01700 PF13784 Fic/DOC family N-terminal AMD22_RS01705 PF00561 alpha/beta hydrolase fold AMD22_RS01710 PF03692 AMD22_RS01710 AMD22_RS01715 PF00501 AMP-binding enzyme AMD22_RS01720 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD22_RS01725 PF07043 AMD22_RS01725 AMD22_RS01735 PF01820 D-ala D-ala ligase N-terminus AMD22_RS01740 PF02036 SCP-2 sterol transfer family AMD22_RS01745 PF03109 AMD22_RS01745 AMD22_RS01750 PF07883 Cupin domain AMD22_RS01755 PF00849 RNA pseudouridylate synthase AMD22_RS01760 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) AMD22_RS01765 PF00472 RF-1 domain AMD22_RS01770 PF01553 Acyltransferase AMD22_RS01775 PF01112 Asparaginase AMD22_RS01780 PF01432 Peptidase family M3 AMD22_RS01785 PF12706 Beta-lactamase superfamily domain AMD22_RS01795 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS01795 PF14246 AefR-like transcriptional repressor, C-terminal region AMD22_RS01800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS01805 PF12833 Helix-turn-helix domain AMD22_RS01810 PF00999 Sodium/hydrogen exchanger family AMD22_RS01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS01815 PF03466 LysR substrate binding domain AMD22_RS01820 PF01274 Malate synthase AMD22_RS01825 PF00463 Isocitrate lyase family AMD22_RS01830 PF00027 Cyclic nucleotide-binding domain AMD22_RS01830 PF00990 GGDEF domain AMD22_RS01835 PF13174 Tetratricopeptide repeat AMD22_RS01835 PF14559 Tetratricopeptide repeat AMD22_RS01845 PF00881 Nitroreductase family AMD22_RS01850 PF00326 Prolyl oligopeptidase family AMD22_RS01855 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD22_RS01855 PF00364 Biotin-requiring enzyme AMD22_RS01855 PF02785 Biotin carboxylase C-terminal domain AMD22_RS01855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD22_RS01860 PF01039 Carboxyl transferase domain AMD22_RS01865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS01865 PF02770 Acyl-CoA dehydrogenase, middle domain AMD22_RS01865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD22_RS01870 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS01880 PF08808 AMD22_RS01880 AMD22_RS01885 PF11804 AMD22_RS01885 AMD22_RS01890 PF03929 AMD22_RS01890 AMD22_RS01895 PF12365 AMD22_RS01895 AMD22_RS01905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD22_RS01910 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS01915 PF03203 AMD22_RS01915 AMD22_RS01920 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD22_RS01920 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD22_RS01940 PF12146 Putative lysophospholipase AMD22_RS01945 PF03969 AFG1-like ATPase AMD22_RS01950 PF01047 MarR family AMD22_RS01955 PF02566 OsmC-like protein AMD22_RS01965 PF12697 Alpha/beta hydrolase family AMD22_RS01970 PF11101 AMD22_RS01970 AMD22_RS01985 PF00107 Zinc-binding dehydrogenase AMD22_RS01985 PF16884 AMD22_RS01985 AMD22_RS01990 PF00248 Aldo/keto reductase family AMD22_RS02000 PF00849 RNA pseudouridylate synthase AMD22_RS02005 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS02005 PF13620 Carboxypeptidase regulatory-like domain AMD22_RS02015 PF00271 Helicase conserved C-terminal domain AMD22_RS02015 PF04408 Helicase associated domain (HA2) AMD22_RS02015 PF08482 AMD22_RS02015 AMD22_RS02025 PF07308 AMD22_RS02025 AMD22_RS02030 PF00576 HIUase/Transthyretin family AMD22_RS02035 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS02040 PF09349 OHCU decarboxylase AMD22_RS02045 PF11533 Protein of unknown function (DUF3225) AMD22_RS02050 PF01522 Polysaccharide deacetylase AMD22_RS02055 PF00266 Aminotransferase class-V AMD22_RS02060 PF01546 Peptidase family M20/M25/M40 AMD22_RS02060 PF07687 Peptidase dimerisation domain AMD22_RS02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS02065 PF03466 LysR substrate binding domain AMD22_RS02070 PF07690 Major Facilitator Superfamily AMD22_RS02080 PF01019 Gamma-glutamyltranspeptidase AMD22_RS02085 PF01425 Amidase AMD22_RS02090 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD22_RS02095 PF00962 Adenosine/AMP deaminase AMD22_RS02100 PF00860 Permease family AMD22_RS02110 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD22_RS02110 PF00970 Oxidoreductase FAD-binding domain AMD22_RS02115 PF00355 Rieske [2Fe-2S] domain AMD22_RS02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS02120 PF03466 LysR substrate binding domain AMD22_RS02125 PF01026 TatD related DNase AMD22_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS02140 PF03466 LysR substrate binding domain AMD22_RS02145 PF07690 Major Facilitator Superfamily AMD22_RS02150 PF13411 MerR HTH family regulatory protein AMD22_RS02155 PF12697 Alpha/beta hydrolase family AMD22_RS02160 PF02146 Sir2 family AMD22_RS02165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD22_RS02170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD22_RS02170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD22_RS02180 PF00551 Formyl transferase AMD22_RS02180 PF01842 ACT domain AMD22_RS02185 PF00072 Response regulator receiver domain AMD22_RS02185 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS02190 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS02190 PF00672 HAMP domain AMD22_RS02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS02195 PF16576 AMD22_RS02195 AMD22_RS02200 PF00873 AcrB/AcrD/AcrF family AMD22_RS02205 PF02321 Outer membrane efflux protein AMD22_RS02215 PF02219 Methylenetetrahydrofolate reductase AMD22_RS02220 PF02677 AMD22_RS02220 AMD22_RS02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS02225 PF03466 LysR substrate binding domain AMD22_RS02230 PF03358 NADPH-dependent FMN reductase AMD22_RS02235 PF08908 AMD22_RS02235 AMD22_RS02240 PF01717 Cobalamin-independent synthase, Catalytic domain AMD22_RS02245 PF03812 AMD22_RS02245 AMD22_RS02250 PF07396 Phosphate-selective porin O and P AMD22_RS02255 PF05368 NmrA-like family AMD22_RS02260 PF01638 HxlR-like helix-turn-helix AMD22_RS02285 PF00665 Integrase core domain AMD22_RS02285 PF13276 AMD22_RS02285 AMD22_RS02290 PF01527 Transposase AMD22_RS02295 PF00589 Phage integrase family AMD22_RS02300 PF00920 Dehydratase family AMD22_RS02305 PF00150 Cellulase (glycosyl hydrolase family 5) AMD22_RS02320 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS02330 PF07690 Major Facilitator Superfamily AMD22_RS02335 PF11871 AMD22_RS02335 AMD22_RS02335 PF13487 HD domain AMD22_RS02340 PF12802 MarR family AMD22_RS02345 PF13557 AMD22_RS02345 AMD22_RS02350 PF00106 short chain dehydrogenase AMD22_RS02350 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS02355 PF00171 Aldehyde dehydrogenase family AMD22_RS02360 PF02311 AraC-like ligand binding domain AMD22_RS02360 PF12833 Helix-turn-helix domain AMD22_RS02365 PF01494 FAD binding domain AMD22_RS02370 PF12680 SnoaL-like domain AMD22_RS02375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD22_RS02375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD22_RS02380 PF00230 Major intrinsic protein AMD22_RS02385 PF01266 FAD dependent oxidoreductase AMD22_RS02385 PF16901 AMD22_RS02385 AMD22_RS02390 PF00455 AMD22_RS02390 AMD22_RS02390 PF08220 DeoR-like helix-turn-helix domain AMD22_RS02395 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD22_RS02395 PF00175 Oxidoreductase NAD-binding domain AMD22_RS02395 PF00970 Oxidoreductase FAD-binding domain AMD22_RS02400 PF00355 Rieske [2Fe-2S] domain AMD22_RS02405 PF01144 Coenzyme A transferase AMD22_RS02410 PF01144 Coenzyme A transferase AMD22_RS02415 PF00108 Thiolase, N-terminal domain AMD22_RS02415 PF02803 Thiolase, C-terminal domain AMD22_RS02420 PF00775 Dioxygenase AMD22_RS02420 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD22_RS02425 PF00775 Dioxygenase AMD22_RS02430 PF00206 Lyase AMD22_RS02430 PF10397 Adenylosuccinate lyase C-terminus AMD22_RS02435 PF00561 alpha/beta hydrolase fold AMD22_RS02440 PF02627 Carboxymuconolactone decarboxylase family AMD22_RS02445 PF12146 Putative lysophospholipase AMD22_RS02450 PF01614 Bacterial transcriptional regulator AMD22_RS02450 PF09339 IclR helix-turn-helix domain AMD22_RS02455 PF01163 RIO1 family AMD22_RS02460 PF07859 alpha/beta hydrolase fold AMD22_RS02465 PF10677 AMD22_RS02465 AMD22_RS02470 PF01134 Glucose inhibited division protein A AMD22_RS02470 PF13932 GidA associated domain 3 AMD22_RS02480 PF00291 Pyridoxal-phosphate dependent enzyme AMD22_RS02485 PF02698 DUF218 domain AMD22_RS02490 PF12680 SnoaL-like domain AMD22_RS02495 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AMD22_RS02500 PF08241 Methyltransferase domain AMD22_RS02505 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS02510 PF12697 Alpha/beta hydrolase family AMD22_RS02520 PF00155 Aminotransferase class I and II AMD22_RS02525 PF04055 Radical SAM superfamily AMD22_RS02525 PF06968 Biotin and Thiamin Synthesis associated domain AMD22_RS02530 PF00156 Phosphoribosyl transferase domain AMD22_RS02535 PF01040 UbiA prenyltransferase family AMD22_RS02550 PF05819 AMD22_RS02550 AMD22_RS02560 PF05932 Tir chaperone protein (CesT) family AMD22_RS02585 PF01313 AMD22_RS02585 AMD22_RS02590 PF00813 AMD22_RS02590 AMD22_RS02595 PF01052 Surface presentation of antigens (SPOA) AMD22_RS02600 PF09483 AMD22_RS02600 AMD22_RS02605 PF00771 FHIPEP family AMD22_RS02610 PF01312 FlhB HrpN YscU SpaS Family AMD22_RS02615 PF09613 AMD22_RS02615 AMD22_RS02620 PF09487 AMD22_RS02620 AMD22_RS02625 PF01514 Secretory protein of YscJ/FliF family AMD22_RS02630 PF09502 AMD22_RS02630 AMD22_RS02635 PF02108 AMD22_RS02635 AMD22_RS02640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD22_RS02640 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD22_RS02645 PF09486 AMD22_RS02645 AMD22_RS02650 PF01311 AMD22_RS02650 AMD22_RS02655 PF00263 AMD22_RS02655 AMD22_RS02655 PF03958 Bacterial type II/III secretion system short domain AMD22_RS02665 PF01464 Transglycosylase SLT domain AMD22_RS02675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD22_RS02680 PF00924 Mechanosensitive ion channel AMD22_RS02680 PF12607 AMD22_RS02680 AMD22_RS02685 PF00884 Sulfatase AMD22_RS02690 PF03109 AMD22_RS02690 AMD22_RS02695 PF05661 AMD22_RS02695 AMD22_RS02700 PF00990 GGDEF domain AMD22_RS02705 PF00534 Glycosyl transferases group 1 AMD22_RS02705 PF08323 Starch synthase catalytic domain AMD22_RS02710 PF00128 Alpha amylase, catalytic domain AMD22_RS02710 PF02806 Alpha amylase, C-terminal all-beta domain AMD22_RS02710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD22_RS02715 PF00128 Alpha amylase, catalytic domain AMD22_RS02715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD22_RS02715 PF11941 Domain of unknown function (DUF3459) AMD22_RS02720 PF02446 4-alpha-glucanotransferase AMD22_RS02725 PF00128 Alpha amylase, catalytic domain AMD22_RS02730 PF11154 AMD22_RS02730 AMD22_RS02735 PF00128 Alpha amylase, catalytic domain AMD22_RS02735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD22_RS02740 PF13460 NADH(P)-binding AMD22_RS02745 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS02750 PF00890 FAD binding domain AMD22_RS02750 PF13454 FAD-NAD(P)-binding AMD22_RS02760 PF06903 AMD22_RS02760 AMD22_RS02765 PF02321 Outer membrane efflux protein AMD22_RS02770 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS02775 PF16576 AMD22_RS02775 AMD22_RS02780 PF00873 AcrB/AcrD/AcrF family AMD22_RS02785 PF00106 short chain dehydrogenase AMD22_RS02795 PF00270 DEAD/DEAH box helicase AMD22_RS02795 PF00271 Helicase conserved C-terminal domain AMD22_RS02800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD22_RS02800 PF00364 Biotin-requiring enzyme AMD22_RS02800 PF02817 e3 binding domain AMD22_RS02805 PF07653 Variant SH3 domain AMD22_RS02810 PF02779 Transketolase, pyrimidine binding domain AMD22_RS02810 PF02780 Transketolase, C-terminal domain AMD22_RS02815 PF00676 Dehydrogenase E1 component AMD22_RS02820 PF00932 Lamin Tail Domain AMD22_RS02820 PF03160 Calx-beta domain AMD22_RS02820 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS02825 PF03301 Tryptophan 2,3-dioxygenase AMD22_RS02830 PF00854 POT family AMD22_RS02835 PF13899 Thioredoxin-like AMD22_RS02840 PF12802 MarR family AMD22_RS02845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS02845 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AMD22_RS02850 PF04209 homogentisate 1,2-dioxygenase AMD22_RS02865 PF03334 AMD22_RS02865 AMD22_RS02870 PF04066 AMD22_RS02870 AMD22_RS02875 PF01899 AMD22_RS02875 AMD22_RS02880 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD22_RS02885 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD22_RS02890 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD22_RS02890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD22_RS02890 PF04039 AMD22_RS02890 AMD22_RS02890 PF13244 AMD22_RS02890 AMD22_RS02895 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS02900 PF06127 AMD22_RS02900 AMD22_RS02905 PF01447 Thermolysin metallopeptidase, catalytic domain AMD22_RS02905 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD22_RS02905 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD22_RS02910 PF00182 Chitinase class I AMD22_RS02910 PF01471 Putative peptidoglycan binding domain AMD22_RS02910 PF01551 Peptidase family M23 AMD22_RS02930 PF01259 SAICAR synthetase AMD22_RS02935 PF00226 DnaJ domain AMD22_RS02940 PF13505 Outer membrane protein beta-barrel domain AMD22_RS02945 PF00834 Ribulose-phosphate 3 epimerase family AMD22_RS02950 PF00583 Acetyltransferase (GNAT) family AMD22_RS02955 PF00781 Diacylglycerol kinase catalytic domain AMD22_RS02960 PF00425 chorismate binding enzyme AMD22_RS02960 PF04715 Anthranilate synthase component I, N terminal region AMD22_RS02965 PF01212 Beta-eliminating lyase AMD22_RS02970 PF00117 Glutamine amidotransferase class-I AMD22_RS02975 PF01613 Flavin reductase like domain AMD22_RS02980 PF00591 Glycosyl transferase family, a/b domain AMD22_RS02980 PF02885 Glycosyl transferase family, helical bundle domain AMD22_RS02985 PF00218 Indole-3-glycerol phosphate synthase AMD22_RS02990 PF12710 haloacid dehalogenase-like hydrolase AMD22_RS02995 PF00027 Cyclic nucleotide-binding domain AMD22_RS02995 PF00325 Bacterial regulatory proteins, crp family AMD22_RS03000 PF02675 S-adenosylmethionine decarboxylase AMD22_RS03005 PF00893 Small Multidrug Resistance protein AMD22_RS03010 PF03232 AMD22_RS03010 AMD22_RS03015 PF00572 Ribosomal protein L13 AMD22_RS03020 PF00380 Ribosomal protein S9/S16 AMD22_RS03035 PF00293 NUDIX domain AMD22_RS03040 PF04324 BFD-like [2Fe-2S] binding domain AMD22_RS03045 PF00210 Ferritin-like domain AMD22_RS03050 PF00072 Response regulator receiver domain AMD22_RS03050 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS03050 PF01627 Hpt domain AMD22_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS03055 PF00072 Response regulator receiver domain AMD22_RS03055 PF00563 EAL domain AMD22_RS03055 PF00990 GGDEF domain AMD22_RS03060 PF13548 AMD22_RS03060 AMD22_RS03070 PF04519 AMD22_RS03070 AMD22_RS03075 PF01521 Iron-sulphur cluster biosynthesis AMD22_RS03085 PF03583 Secretory lipase AMD22_RS03090 PF01609 Transposase DDE domain AMD22_RS03095 PF00293 NUDIX domain AMD22_RS03095 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD22_RS03095 PF09297 NADH pyrophosphatase zinc ribbon domain AMD22_RS03100 PF03186 AMD22_RS03100 AMD22_RS03105 PF10825 AMD22_RS03105 AMD22_RS03110 PF04505 AMD22_RS03110 AMD22_RS03120 PF01553 Acyltransferase AMD22_RS03120 PF07690 Major Facilitator Superfamily AMD22_RS03125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS03125 PF03466 LysR substrate binding domain AMD22_RS03130 PF07690 Major Facilitator Superfamily AMD22_RS03135 PF12805 AMD22_RS03135 AMD22_RS03135 PF13515 AMD22_RS03135 AMD22_RS03145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD22_RS03145 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD22_RS03145 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD22_RS03155 PF01808 AICARFT/IMPCHase bienzyme AMD22_RS03155 PF02142 MGS-like domain AMD22_RS03160 PF01066 CDP-alcohol phosphatidyltransferase AMD22_RS03165 PF12146 Putative lysophospholipase AMD22_RS03165 PF12147 AMD22_RS03165 AMD22_RS03170 PF00782 Dual specificity phosphatase, catalytic domain AMD22_RS03185 PF01066 CDP-alcohol phosphatidyltransferase AMD22_RS03190 PF01553 Acyltransferase AMD22_RS03195 PF01148 Cytidylyltransferase family AMD22_RS03200 PF02954 Bacterial regulatory protein, Fis family AMD22_RS03205 PF11906 AMD22_RS03205 AMD22_RS03215 PF01381 Helix-turn-helix AMD22_RS03225 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AMD22_RS03240 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD22_RS03240 PF02785 Biotin carboxylase C-terminal domain AMD22_RS03240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD22_RS03245 PF05635 23S rRNA-intervening sequence protein AMD22_RS03250 PF00364 Biotin-requiring enzyme AMD22_RS03255 PF01220 Dehydroquinase class II AMD22_RS03260 PF02683 AMD22_RS03260 AMD22_RS03260 PF11412 Disulphide bond corrector protein DsbC AMD22_RS03260 PF13899 Thioredoxin-like AMD22_RS03265 PF03091 CutA1 divalent ion tolerance protein AMD22_RS03270 PF12625 AMD22_RS03270 AMD22_RS03270 PF12833 Helix-turn-helix domain AMD22_RS03280 PF01852 START domain AMD22_RS03290 PF00106 short chain dehydrogenase AMD22_RS03295 PF00932 Lamin Tail Domain AMD22_RS03295 PF04231 Endonuclease I AMD22_RS03295 PF13205 Bacterial Ig-like domain AMD22_RS03300 PF00166 Chaperonin 10 Kd subunit AMD22_RS03305 PF00118 TCP-1/cpn60 chaperonin family AMD22_RS03315 PF00593 TonB dependent receptor AMD22_RS03315 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS03320 PF00793 DAHP synthetase I family AMD22_RS03335 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD22_RS03345 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD22_RS03345 PF08335 GlnD PII-uridylyltransferase AMD22_RS03350 PF02592 AMD22_RS03350 AMD22_RS03360 PF00082 Subtilase family AMD22_RS03360 PF09286 Pro-kumamolisin, activation domain AMD22_RS03365 PF06258 AMD22_RS03365 AMD22_RS03370 PF00881 Nitroreductase family AMD22_RS03375 PF04264 YceI-like domain AMD22_RS03385 PF00328 Histidine phosphatase superfamily (branch 2) AMD22_RS03390 PF04954 Siderophore-interacting protein AMD22_RS03390 PF08021 Siderophore-interacting FAD-binding domain AMD22_RS03395 PF03551 Transcriptional regulator PadR-like family AMD22_RS03400 PF16957 AMD22_RS03400 AMD22_RS03405 PF06857 AMD22_RS03405 AMD22_RS03410 PF01039 Carboxyl transferase domain AMD22_RS03415 PF06833 Malonate decarboxylase gamma subunit (MdcE) AMD22_RS03420 PF10620 AMD22_RS03420 AMD22_RS03425 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD22_RS03430 PF00698 Acyl transferase domain AMD22_RS03435 PF03600 Citrate transporter AMD22_RS03435 PF07158 AMD22_RS03435 AMD22_RS03440 PF00392 Bacterial regulatory proteins, gntR family AMD22_RS03440 PF07729 FCD domain AMD22_RS03445 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS03450 PF01740 STAS domain AMD22_RS03455 PF13581 Histidine kinase-like ATPase domain AMD22_RS03460 PF00672 HAMP domain AMD22_RS03460 PF02743 Cache domain AMD22_RS03460 PF07228 Stage II sporulation protein E (SpoIIE) AMD22_RS03470 PF01764 Lipase (class 3) AMD22_RS03475 PF07745 Glycosyl hydrolase family 53 AMD22_RS03480 PF00456 Transketolase, thiamine diphosphate binding domain AMD22_RS03485 PF00665 Integrase core domain AMD22_RS03485 PF13276 AMD22_RS03485 AMD22_RS03490 PF01527 Transposase AMD22_RS03495 PF00106 short chain dehydrogenase AMD22_RS03500 PF12833 Helix-turn-helix domain AMD22_RS03500 PF12852 Cupin AMD22_RS03510 PF00106 short chain dehydrogenase AMD22_RS03510 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS03515 PF01145 SPFH domain / Band 7 family AMD22_RS03520 PF13409 Glutathione S-transferase, N-terminal domain AMD22_RS03520 PF13410 Glutathione S-transferase, C-terminal domain AMD22_RS03525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS03530 PF13548 AMD22_RS03530 AMD22_RS03540 PF05708 Orthopoxvirus protein of unknown function (DUF830) AMD22_RS03545 PF12823 AMD22_RS03545 AMD22_RS03550 PF00326 Prolyl oligopeptidase family AMD22_RS03550 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD22_RS03555 PF07759 AMD22_RS03555 AMD22_RS03565 PF00990 GGDEF domain AMD22_RS03585 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMD22_RS03590 PF00892 EamA-like transporter family AMD22_RS03595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD22_RS03605 PF00324 Amino acid permease AMD22_RS03615 PF01544 CorA-like Mg2+ transporter protein AMD22_RS03620 PF01987 Mitochondrial biogenesis AIM24 AMD22_RS03625 PF01204 Trehalase AMD22_RS03630 PF01904 Protein of unknown function DUF72 AMD22_RS03635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD22_RS03635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD22_RS03655 PF00675 Insulinase (Peptidase family M16) AMD22_RS03655 PF05193 Peptidase M16 inactive domain AMD22_RS03660 PF00990 GGDEF domain AMD22_RS03660 PF01590 GAF domain AMD22_RS03660 PF08447 PAS fold AMD22_RS03660 PF08448 PAS fold AMD22_RS03665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS03665 PF00672 HAMP domain AMD22_RS03665 PF17200 AMD22_RS03665 AMD22_RS03670 PF00150 Cellulase (glycosyl hydrolase family 5) AMD22_RS03670 PF00553 Cellulose binding domain AMD22_RS03675 PF00916 AMD22_RS03675 AMD22_RS03675 PF01740 STAS domain AMD22_RS03685 PF00990 GGDEF domain AMD22_RS03690 PF02225 PA domain AMD22_RS03690 PF04389 Peptidase family M28 AMD22_RS03700 PF13632 Glycosyl transferase family group 2 AMD22_RS03705 PF02230 Phospholipase/Carboxylesterase AMD22_RS03710 PF06580 AMD22_RS03710 AMD22_RS03715 PF00072 Response regulator receiver domain AMD22_RS03715 PF04397 LytTr DNA-binding domain AMD22_RS03720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD22_RS03720 PF03900 Porphobilinogen deaminase, C-terminal domain AMD22_RS03725 PF04338 Protein of unknown function, DUF481 AMD22_RS03730 PF08279 HTH domain AMD22_RS03730 PF13280 AMD22_RS03730 AMD22_RS03735 PF08212 Lipocalin-like domain AMD22_RS03745 PF00326 Prolyl oligopeptidase family AMD22_RS03745 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD22_RS03755 PF00155 Aminotransferase class I and II AMD22_RS03760 PF00326 Prolyl oligopeptidase family AMD22_RS03760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD22_RS03765 PF04304 AMD22_RS03765 AMD22_RS03770 PF13627 AMD22_RS03770 AMD22_RS03775 PF01678 Diaminopimelate epimerase AMD22_RS03780 PF04340 Protein of unknown function, DUF484 AMD22_RS03785 PF00589 Phage integrase family AMD22_RS03785 PF02899 Phage integrase, N-terminal SAM-like domain AMD22_RS03790 PF00227 Proteasome subunit AMD22_RS03795 PF00004 ATPase family associated with various cellular activities (AAA) AMD22_RS03795 PF07724 AAA domain (Cdc48 subfamily) AMD22_RS03795 PF10431 C-terminal, D2-small domain, of ClpB protein AMD22_RS03800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD22_RS03805 PF13673 Acetyltransferase (GNAT) domain AMD22_RS03810 PF16576 AMD22_RS03810 AMD22_RS03815 PF07690 Major Facilitator Superfamily AMD22_RS03820 PF01209 ubiE/COQ5 methyltransferase family AMD22_RS03825 PF00672 HAMP domain AMD22_RS03825 PF00990 GGDEF domain AMD22_RS03830 PF01433 Peptidase family M1 AMD22_RS03830 PF09127 Leukotriene A4 hydrolase, C-terminal AMD22_RS03845 PF00702 haloacid dehalogenase-like hydrolase AMD22_RS03850 PF13360 PQQ-like domain AMD22_RS03850 PF13570 PQQ-like domain AMD22_RS03855 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD22_RS03855 PF12796 Ankyrin repeats (3 copies) AMD22_RS03855 PF13857 Ankyrin repeats (many copies) AMD22_RS03860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD22_RS03865 PF10282 Lactonase, 7-bladed beta-propeller AMD22_RS03870 PF00107 Zinc-binding dehydrogenase AMD22_RS03870 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS03875 PF00593 TonB dependent receptor AMD22_RS03875 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS03880 PF00158 Sigma-54 interaction domain AMD22_RS03880 PF02954 Bacterial regulatory protein, Fis family AMD22_RS03885 PF00294 pfkB family carbohydrate kinase AMD22_RS03890 PF06723 MreB/Mbl protein AMD22_RS03895 PF04085 rod shape-determining protein MreC AMD22_RS03900 PF04093 AMD22_RS03900 AMD22_RS03905 PF00905 Penicillin binding protein transpeptidase domain AMD22_RS03905 PF03717 Penicillin-binding Protein dimerisation domain AMD22_RS03910 PF01098 AMD22_RS03910 AMD22_RS03915 PF00295 Glycosyl hydrolases family 28 AMD22_RS03920 PF13406 Transglycosylase SLT domain AMD22_RS03925 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AMD22_RS03925 PF05036 Sporulation related domain AMD22_RS03935 PF00768 D-alanyl-D-alanine carboxypeptidase AMD22_RS03935 PF07943 Penicillin-binding protein 5, C-terminal domain AMD22_RS03940 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) AMD22_RS03945 PF04359 Protein of unknown function (DUF493) AMD22_RS03950 PF03099 Biotin/lipoate A/B protein ligase family AMD22_RS03955 PF04055 Radical SAM superfamily AMD22_RS03955 PF16881 AMD22_RS03955 AMD22_RS03960 PF00595 PDZ domain (Also known as DHR or GLGF) AMD22_RS03960 PF03572 Peptidase family S41 AMD22_RS03960 PF11818 AMD22_RS03960 AMD22_RS03965 PF01925 AMD22_RS03965 AMD22_RS03970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS03970 PF03466 LysR substrate binding domain AMD22_RS03975 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS03980 PF00293 NUDIX domain AMD22_RS03980 PF01467 Cytidylyltransferase AMD22_RS03985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD22_RS03995 PF01555 DNA methylase AMD22_RS04000 PF10001 AMD22_RS04000 AMD22_RS04005 PF05433 AMD22_RS04005 AMD22_RS04015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD22_RS04015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD22_RS04020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD22_RS04020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD22_RS04025 PF04972 BON domain AMD22_RS04030 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS04030 PF05227 CHASE3 domain AMD22_RS04030 PF13188 PAS domain AMD22_RS04035 PF00072 Response regulator receiver domain AMD22_RS04040 PF00072 Response regulator receiver domain AMD22_RS04040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS04045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD22_RS04050 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS04055 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AMD22_RS04060 PF04892 AMD22_RS04060 AMD22_RS04065 PF00593 TonB dependent receptor AMD22_RS04065 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS04070 PF13640 2OG-Fe(II) oxygenase superfamily AMD22_RS04080 PF00593 TonB dependent receptor AMD22_RS04080 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS04085 PF11356 Type IV pilus biogenesis AMD22_RS04085 PF13180 PDZ domain AMD22_RS04090 PF00263 AMD22_RS04090 AMD22_RS04090 PF03958 Bacterial type II/III secretion system short domain AMD22_RS04095 PF00437 Type II/IV secretion system protein AMD22_RS04100 PF00482 Type II secretion system (T2SS), protein F AMD22_RS04105 PF08334 Type II secretion system (T2SS), protein G AMD22_RS04105 PF13544 AMD22_RS04105 AMD22_RS04110 PF12019 Type II transport protein GspH AMD22_RS04115 PF02501 Type II secretion system (T2SS), protein I AMD22_RS04115 PF13633 Prokaryotic N-terminal methylation site AMD22_RS04120 PF11612 Type II secretion system (T2SS), protein J AMD22_RS04120 PF13544 AMD22_RS04120 AMD22_RS04125 PF03934 Type II secretion system (T2SS), protein K AMD22_RS04130 PF05134 Type II secretion system (T2SS), protein L AMD22_RS04130 PF12693 GspL periplasmic domain AMD22_RS04135 PF04612 Type II secretion system (T2SS), protein M AMD22_RS04140 PF01203 AMD22_RS04140 AMD22_RS04145 PF00593 TonB dependent receptor AMD22_RS04145 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS04155 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain AMD22_RS04155 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain AMD22_RS04155 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain AMD22_RS04160 PF07786 AMD22_RS04160 AMD22_RS04165 PF00392 Bacterial regulatory proteins, gntR family AMD22_RS04165 PF07702 UTRA domain AMD22_RS04170 PF07690 Major Facilitator Superfamily AMD22_RS04175 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS04175 PF13377 Periplasmic binding protein-like domain AMD22_RS04180 PF01380 SIS domain AMD22_RS04185 PF01979 Amidohydrolase family AMD22_RS04190 PF00593 TonB dependent receptor AMD22_RS04190 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS04195 PF01743 Poly A polymerase head domain AMD22_RS04195 PF01966 HD domain AMD22_RS04195 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD22_RS04200 PF00732 GMC oxidoreductase AMD22_RS04200 PF05199 GMC oxidoreductase AMD22_RS04205 PF00171 Aldehyde dehydrogenase family AMD22_RS04210 PF02028 BCCT family transporter AMD22_RS04215 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS04220 PF01323 DSBA-like thioredoxin domain AMD22_RS04225 PF13462 Thioredoxin AMD22_RS04230 PF00034 Cytochrome c AMD22_RS04235 PF01926 50S ribosome-binding GTPase AMD22_RS04240 PF00753 Metallo-beta-lactamase superfamily AMD22_RS04245 PF12833 Helix-turn-helix domain AMD22_RS04250 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD22_RS04255 PF00672 HAMP domain AMD22_RS04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS04260 PF00072 Response regulator receiver domain AMD22_RS04260 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS04265 PF00534 Glycosyl transferases group 1 AMD22_RS04275 PF02583 Metal-sensitive transcriptional repressor AMD22_RS04280 PF00107 Zinc-binding dehydrogenase AMD22_RS04280 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS04285 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD22_RS04290 PF00756 Putative esterase AMD22_RS04300 PF00155 Aminotransferase class I and II AMD22_RS04300 PF00392 Bacterial regulatory proteins, gntR family AMD22_RS04305 PF02567 Phenazine biosynthesis-like protein AMD22_RS04310 PF00892 EamA-like transporter family AMD22_RS04320 PF00005 ABC transporter AMD22_RS04320 PF12848 ABC transporter AMD22_RS04325 PF11776 Domain of unknown function (DUF3315) AMD22_RS04330 PF00464 Serine hydroxymethyltransferase AMD22_RS04335 PF03477 ATP cone domain AMD22_RS04340 PF00583 Acetyltransferase (GNAT) family AMD22_RS04345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD22_RS04345 PF01872 RibD C-terminal domain AMD22_RS04355 PF00677 Lumazine binding domain AMD22_RS04360 PF00925 GTP cyclohydrolase II AMD22_RS04360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD22_RS04365 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD22_RS04370 PF01029 NusB family AMD22_RS04375 PF00586 AIR synthase related protein, N-terminal domain AMD22_RS04375 PF02769 AIR synthase related protein, C-terminal domain AMD22_RS04380 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD22_RS04380 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD22_RS04385 PF00646 F-box domain AMD22_RS04390 PF09604 AMD22_RS04390 AMD22_RS04395 PF03814 AMD22_RS04395 AMD22_RS04400 PF00122 E1-E2 ATPase AMD22_RS04400 PF00702 haloacid dehalogenase-like hydrolase AMD22_RS04405 PF02669 AMD22_RS04405 AMD22_RS04410 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS04410 PF00582 Universal stress protein family AMD22_RS04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS04410 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD22_RS04410 PF13493 Domain of unknown function (DUF4118) AMD22_RS04415 PF00072 Response regulator receiver domain AMD22_RS04415 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS04430 PF01565 FAD binding domain AMD22_RS04430 PF02913 FAD linked oxidases, C-terminal domain AMD22_RS04435 PF04307 AMD22_RS04435 AMD22_RS04440 PF02021 Uncharacterised protein family UPF0102 AMD22_RS04445 PF04348 LppC putative lipoprotein AMD22_RS04450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD22_RS04455 PF07362 Post-segregation antitoxin CcdA AMD22_RS04460 PF05742 AMD22_RS04460 AMD22_RS04465 PF02381 MraZ protein AMD22_RS04470 PF01795 MraW methylase family AMD22_RS04475 PF04999 AMD22_RS04475 AMD22_RS04480 PF00905 Penicillin binding protein transpeptidase domain AMD22_RS04480 PF03717 Penicillin-binding Protein dimerisation domain AMD22_RS04485 PF01225 Mur ligase family, catalytic domain AMD22_RS04485 PF02875 Mur ligase family, glutamate ligase domain AMD22_RS04485 PF08245 Mur ligase middle domain AMD22_RS04490 PF01225 Mur ligase family, catalytic domain AMD22_RS04490 PF02875 Mur ligase family, glutamate ligase domain AMD22_RS04490 PF08245 Mur ligase middle domain AMD22_RS04495 PF00953 Glycosyl transferase family 4 AMD22_RS04500 PF01098 AMD22_RS04500 AMD22_RS04505 PF03033 Glycosyltransferase family 28 N-terminal domain AMD22_RS04505 PF04101 Glycosyltransferase family 28 C-terminal domain AMD22_RS04510 PF01225 Mur ligase family, catalytic domain AMD22_RS04510 PF02875 Mur ligase family, glutamate ligase domain AMD22_RS04510 PF08245 Mur ligase middle domain AMD22_RS04515 PF01820 D-ala D-ala ligase N-terminus AMD22_RS04515 PF07478 D-ala D-ala ligase C-terminus AMD22_RS04520 PF03799 Cell division protein FtsQ AMD22_RS04520 PF08478 POTRA domain, FtsQ-type AMD22_RS04525 PF02491 SHS2 domain inserted in FTSA AMD22_RS04525 PF14450 Cell division protein FtsA AMD22_RS04530 PF00091 Tubulin/FtsZ family, GTPase domain AMD22_RS04530 PF12327 FtsZ family, C-terminal domain AMD22_RS04535 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD22_RS04540 PF05258 AMD22_RS04540 AMD22_RS04545 PF01551 Peptidase family M23 AMD22_RS04550 PF01043 SecA preprotein cross-linking domain AMD22_RS04550 PF02810 SEC-C motif AMD22_RS04550 PF07516 SecA Wing and Scaffold domain AMD22_RS04550 PF07517 SecA DEAD-like domain AMD22_RS04555 PF00293 NUDIX domain AMD22_RS04555 PF02581 Thiamine monophosphate synthase/TENI AMD22_RS04565 PF02219 Methylenetetrahydrofolate reductase AMD22_RS04570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD22_RS04575 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS04575 PF13602 Zinc-binding dehydrogenase AMD22_RS04580 PF00082 Subtilase family AMD22_RS04580 PF09286 Pro-kumamolisin, activation domain AMD22_RS04590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD22_RS04595 PF00128 Alpha amylase, catalytic domain AMD22_RS04605 PF09831 AMD22_RS04605 AMD22_RS04610 PF11539 Protein of unknown function (DUF3228) AMD22_RS04620 PF00685 Sulfotransferase domain AMD22_RS04625 PF13649 Methyltransferase domain AMD22_RS04630 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD22_RS04630 PF05221 S-adenosyl-L-homocysteine hydrolase AMD22_RS04635 PF00326 Prolyl oligopeptidase family AMD22_RS04640 PF00311 Phosphoenolpyruvate carboxylase AMD22_RS04645 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS04650 PF13387 AMD22_RS04650 AMD22_RS04665 PF00593 TonB dependent receptor AMD22_RS04665 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS04670 PF00328 Histidine phosphatase superfamily (branch 2) AMD22_RS04675 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD22_RS04675 PF02772 S-adenosylmethionine synthetase, central domain AMD22_RS04675 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD22_RS04680 PF04307 AMD22_RS04680 AMD22_RS04685 PF08241 Methyltransferase domain AMD22_RS04690 PF01207 Dihydrouridine synthase (Dus) AMD22_RS04695 PF08306 Glycosyl hydrolase family 98 AMD22_RS04695 PF08307 Glycosyl hydrolase family 98 C-terminal domain AMD22_RS04695 PF16990 AMD22_RS04695 AMD22_RS04700 PF00294 pfkB family carbohydrate kinase AMD22_RS04705 PF01773 Na+ dependent nucleoside transporter N-terminus AMD22_RS04705 PF07662 Na+ dependent nucleoside transporter C-terminus AMD22_RS04705 PF07670 Nucleoside recognition AMD22_RS04710 PF00248 Aldo/keto reductase family AMD22_RS04715 PF10636 Hemin uptake protein hemP AMD22_RS04720 PF00593 TonB dependent receptor AMD22_RS04720 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS04735 PF04342 AMD22_RS04735 AMD22_RS04740 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS04745 PF00005 ABC transporter AMD22_RS04750 PF13379 NMT1-like family AMD22_RS04755 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD22_RS04760 PF02687 AMD22_RS04760 AMD22_RS04765 PF00005 ABC transporter AMD22_RS04770 PF13472 GDSL-like Lipase/Acylhydrolase family AMD22_RS04775 PF00072 Response regulator receiver domain AMD22_RS04775 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS04780 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS04780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS04785 PF13472 GDSL-like Lipase/Acylhydrolase family AMD22_RS04790 PF01219 Prokaryotic diacylglycerol kinase AMD22_RS04795 PF04011 LemA family AMD22_RS04800 PF04536 TLP18 AMD22_RS04805 PF04536 TLP18 AMD22_RS04810 PF01790 AMD22_RS04810 AMD22_RS04815 PF00303 Thymidylate synthase AMD22_RS04825 PF00186 Dihydrofolate reductase AMD22_RS04830 PF00158 Sigma-54 interaction domain AMD22_RS04835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD22_RS04835 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS04840 PF00005 ABC transporter AMD22_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS04850 PF09084 NMT1/THI5 like AMD22_RS04855 PF00296 Luciferase-like monooxygenase AMD22_RS04860 PF03358 NADPH-dependent FMN reductase AMD22_RS04865 PF00593 TonB dependent receptor AMD22_RS04865 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS04875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS04880 PF00296 Luciferase-like monooxygenase AMD22_RS04885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD22_RS04890 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS04895 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS04900 PF00005 ABC transporter AMD22_RS04900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD22_RS04905 PF00149 Calcineurin-like phosphoesterase AMD22_RS04910 PF04379 Protein of unknown function (DUF525) AMD22_RS04915 PF00398 Ribosomal RNA adenine dimethylase AMD22_RS04920 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD22_RS04925 PF00639 PPIC-type PPIASE domain AMD22_RS04925 PF09312 SurA N-terminal domain AMD22_RS04925 PF13616 PPIC-type PPIASE domain AMD22_RS04930 PF03968 OstA-like protein AMD22_RS04930 PF04453 Organic solvent tolerance protein AMD22_RS04935 PF00850 Histone deacetylase domain AMD22_RS04940 PF00850 Histone deacetylase domain AMD22_RS04945 PF01923 Cobalamin adenosyltransferase AMD22_RS04955 PF01494 FAD binding domain AMD22_RS04960 PF01494 FAD binding domain AMD22_RS04965 PF12697 Alpha/beta hydrolase family AMD22_RS04970 PF13577 SnoaL-like domain AMD22_RS04975 PF13557 AMD22_RS04975 AMD22_RS04980 PF00392 Bacterial regulatory proteins, gntR family AMD22_RS04980 PF07729 FCD domain AMD22_RS04985 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD22_RS04990 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD22_RS04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS04995 PF03466 LysR substrate binding domain AMD22_RS05000 PF00501 AMP-binding enzyme AMD22_RS05000 PF13193 AMP-binding enzyme C-terminal domain AMD22_RS05005 PF00171 Aldehyde dehydrogenase family AMD22_RS05010 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS05015 PF12802 MarR family AMD22_RS05020 PF13202 EF hand AMD22_RS05030 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD22_RS05035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD22_RS05040 PF01728 FtsJ-like methyltransferase AMD22_RS05045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD22_RS05075 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD22_RS05075 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD22_RS05080 PF13409 Glutathione S-transferase, N-terminal domain AMD22_RS05085 PF09413 Domain of unknown function (DUF2007) AMD22_RS05090 PF00072 Response regulator receiver domain AMD22_RS05095 PF00072 Response regulator receiver domain AMD22_RS05095 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS05095 PF00672 HAMP domain AMD22_RS05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS05095 PF05227 CHASE3 domain AMD22_RS05100 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS05105 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD22_RS05110 PF01625 Peptide methionine sulfoxide reductase AMD22_RS05115 PF01965 DJ-1/PfpI family AMD22_RS05120 PF00923 Transaldolase AMD22_RS05125 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD22_RS05125 PF14760 Rnk N-terminus AMD22_RS05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS05130 PF03466 LysR substrate binding domain AMD22_RS05135 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS05135 PF13192 Thioredoxin domain AMD22_RS05140 PF00578 AhpC/TSA family AMD22_RS05140 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD22_RS05145 PF05175 Methyltransferase small domain AMD22_RS05150 PF00561 alpha/beta hydrolase fold AMD22_RS05155 PF05013 N-formylglutamate amidohydrolase AMD22_RS05160 PF00293 NUDIX domain AMD22_RS05165 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD22_RS05165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD22_RS05170 PF00881 Nitroreductase family AMD22_RS05175 PF07793 AMD22_RS05175 AMD22_RS05180 PF07793 AMD22_RS05180 AMD22_RS05185 PF12146 Putative lysophospholipase AMD22_RS05190 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS05190 PF13305 WHG domain AMD22_RS05195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD22_RS05195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD22_RS05200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD22_RS05205 PF11304 AMD22_RS05205 AMD22_RS05215 PF04542 Sigma-70 region 2 AMD22_RS05215 PF08281 Sigma-70, region 4 AMD22_RS05220 PF12769 Domain of unknown function (DUF3814) AMD22_RS05225 PF02233 NAD(P) transhydrogenase beta subunit AMD22_RS05235 PF01883 Domain of unknown function DUF59 AMD22_RS05240 PF01063 Aminotransferase class IV AMD22_RS05245 PF00082 Subtilase family AMD22_RS05245 PF04151 Bacterial pre-peptidase C-terminal domain AMD22_RS05250 PF00082 Subtilase family AMD22_RS05255 PF00082 Subtilase family AMD22_RS05255 PF04151 Bacterial pre-peptidase C-terminal domain AMD22_RS05260 PF04073 Aminoacyl-tRNA editing domain AMD22_RS05265 PF00710 Asparaginase AMD22_RS05275 PF09842 AMD22_RS05275 AMD22_RS05280 PF03358 NADPH-dependent FMN reductase AMD22_RS05285 PF03631 AMD22_RS05285 AMD22_RS05290 PF00578 AhpC/TSA family AMD22_RS05295 PF00708 Acylphosphatase AMD22_RS05305 PF03976 Polyphosphate kinase 2 (PPK2) AMD22_RS05310 PF00994 Probable molybdopterin binding domain AMD22_RS05315 PF13844 Glycosyl transferase family 41 AMD22_RS05315 PF14559 Tetratricopeptide repeat AMD22_RS05320 PF00472 RF-1 domain AMD22_RS05320 PF03462 PCRF domain AMD22_RS05325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD22_RS05325 PF01488 Shikimate / quinate 5-dehydrogenase AMD22_RS05325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD22_RS05330 PF13429 Tetratricopeptide repeat AMD22_RS05335 PF03550 Outer membrane lipoprotein LolB AMD22_RS05340 PF00288 GHMP kinases N terminal domain AMD22_RS05340 PF08544 GHMP kinases C terminal AMD22_RS05350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD22_RS05350 PF14572 Phosphoribosyl synthetase-associated domain AMD22_RS05355 PF01386 Ribosomal L25p family AMD22_RS05355 PF14693 Ribosomal protein TL5, C-terminal domain AMD22_RS05360 PF01195 Peptidyl-tRNA hydrolase AMD22_RS05365 PF01926 50S ribosome-binding GTPase AMD22_RS05365 PF06071 Protein of unknown function (DUF933) AMD22_RS05385 PF00009 Elongation factor Tu GTP binding domain AMD22_RS05385 PF03143 Elongation factor Tu C-terminal domain AMD22_RS05385 PF03144 Elongation factor Tu domain 2 AMD22_RS05395 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD22_RS05400 PF00467 KOW motif AMD22_RS05400 PF02357 Transcription termination factor nusG AMD22_RS05405 PF00298 Ribosomal protein L11, RNA binding domain AMD22_RS05405 PF03946 Ribosomal protein L11, N-terminal domain AMD22_RS05410 PF00687 Ribosomal protein L1p/L10e family AMD22_RS05415 PF00466 Ribosomal protein L10 AMD22_RS05420 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD22_RS05420 PF16320 AMD22_RS05420 AMD22_RS05425 PF00562 RNA polymerase Rpb2, domain 6 AMD22_RS05425 PF04560 RNA polymerase Rpb2, domain 7 AMD22_RS05425 PF04561 RNA polymerase Rpb2, domain 2 AMD22_RS05425 PF04563 RNA polymerase beta subunit AMD22_RS05425 PF04565 RNA polymerase Rpb2, domain 3 AMD22_RS05425 PF10385 RNA polymerase beta subunit external 1 domain AMD22_RS05430 PF00623 RNA polymerase Rpb1, domain 2 AMD22_RS05430 PF04983 RNA polymerase Rpb1, domain 3 AMD22_RS05430 PF04997 RNA polymerase Rpb1, domain 1 AMD22_RS05430 PF04998 RNA polymerase Rpb1, domain 5 AMD22_RS05430 PF05000 RNA polymerase Rpb1, domain 4 AMD22_RS05435 PF00164 Ribosomal protein S12/S23 AMD22_RS05440 PF00177 Ribosomal protein S7p/S5e AMD22_RS05445 PF00009 Elongation factor Tu GTP binding domain AMD22_RS05445 PF00679 Elongation factor G C-terminus AMD22_RS05445 PF03144 Elongation factor Tu domain 2 AMD22_RS05445 PF03764 Elongation factor G, domain IV AMD22_RS05445 PF14492 Elongation Factor G, domain II AMD22_RS05450 PF00009 Elongation factor Tu GTP binding domain AMD22_RS05450 PF03143 Elongation factor Tu C-terminal domain AMD22_RS05450 PF03144 Elongation factor Tu domain 2 AMD22_RS05455 PF00338 Ribosomal protein S10p/S20e AMD22_RS05460 PF00297 Ribosomal protein L3 AMD22_RS05465 PF00573 Ribosomal protein L4/L1 family AMD22_RS05470 PF00276 Ribosomal protein L23 AMD22_RS05475 PF00181 Ribosomal Proteins L2, RNA binding domain AMD22_RS05475 PF03947 Ribosomal Proteins L2, C-terminal domain AMD22_RS05480 PF00203 Ribosomal protein S19 AMD22_RS05485 PF00237 Ribosomal protein L22p/L17e AMD22_RS05490 PF00189 Ribosomal protein S3, C-terminal domain AMD22_RS05490 PF07650 KH domain AMD22_RS05495 PF00252 Ribosomal protein L16p/L10e AMD22_RS05500 PF00831 Ribosomal L29 protein AMD22_RS05505 PF00366 Ribosomal protein S17 AMD22_RS05510 PF00238 Ribosomal protein L14p/L23e AMD22_RS05515 PF00467 KOW motif AMD22_RS05515 PF17136 AMD22_RS05515 AMD22_RS05520 PF00281 Ribosomal protein L5 AMD22_RS05520 PF00673 ribosomal L5P family C-terminus AMD22_RS05525 PF00253 Ribosomal protein S14p/S29e AMD22_RS05530 PF00410 Ribosomal protein S8 AMD22_RS05535 PF00347 Ribosomal protein L6 AMD22_RS05540 PF00861 Ribosomal L18p/L5e family AMD22_RS05545 PF00333 Ribosomal protein S5, N-terminal domain AMD22_RS05545 PF03719 Ribosomal protein S5, C-terminal domain AMD22_RS05550 PF00327 Ribosomal protein L30p/L7e AMD22_RS05555 PF00828 Ribosomal protein L18e/L15 AMD22_RS05560 PF00344 SecY translocase AMD22_RS05565 PF00416 Ribosomal protein S13/S18 AMD22_RS05570 PF00411 Ribosomal protein S11 AMD22_RS05575 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD22_RS05575 PF01479 S4 domain AMD22_RS05580 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD22_RS05580 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD22_RS05580 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD22_RS05585 PF01196 Ribosomal protein L17 AMD22_RS05590 PF02600 Disulfide bond formation protein DsbB AMD22_RS05600 PF00593 TonB dependent receptor AMD22_RS05600 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS05605 PF01474 Class-II DAHP synthetase family AMD22_RS05610 PF00924 Mechanosensitive ion channel AMD22_RS05615 PF01425 Amidase AMD22_RS05620 PF09900 AMD22_RS05620 AMD22_RS05625 PF00009 Elongation factor Tu GTP binding domain AMD22_RS05625 PF00679 Elongation factor G C-terminus AMD22_RS05625 PF03144 Elongation factor Tu domain 2 AMD22_RS05630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD22_RS05635 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD22_RS05635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD22_RS05640 PF00043 Glutathione S-transferase, C-terminal domain AMD22_RS05640 PF02798 Glutathione S-transferase, N-terminal domain AMD22_RS05645 PF07486 Cell Wall Hydrolase AMD22_RS05650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD22_RS05650 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS05655 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS05655 PF13602 Zinc-binding dehydrogenase AMD22_RS05660 PF00691 OmpA family AMD22_RS05660 PF13505 Outer membrane protein beta-barrel domain AMD22_RS05670 PF00849 RNA pseudouridylate synthase AMD22_RS05670 PF01479 S4 domain AMD22_RS05680 PF00155 Aminotransferase class I and II AMD22_RS05685 PF13531 Bacterial extracellular solute-binding protein AMD22_RS05690 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS05695 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS05700 PF00005 ABC transporter AMD22_RS05700 PF12857 AMD22_RS05700 AMD22_RS05705 PF09694 AMD22_RS05705 AMD22_RS05710 PF00107 Zinc-binding dehydrogenase AMD22_RS05710 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS05720 PF00593 TonB dependent receptor AMD22_RS05720 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS05725 PF04185 Phosphoesterase family AMD22_RS05725 PF05506 AMD22_RS05725 AMD22_RS05730 PF10459 Peptidase S46 AMD22_RS05735 PF10459 Peptidase S46 AMD22_RS05740 PF00300 Histidine phosphatase superfamily (branch 1) AMD22_RS05745 PF08245 Mur ligase middle domain AMD22_RS05750 PF05036 Sporulation related domain AMD22_RS05755 PF02674 AMD22_RS05755 AMD22_RS05760 PF13522 Glutamine amidotransferase domain AMD22_RS05765 PF04305 AMD22_RS05765 AMD22_RS05775 PF13688 Metallo-peptidase family M12 AMD22_RS05785 PF00149 Calcineurin-like phosphoesterase AMD22_RS05790 PF01569 PAP2 superfamily AMD22_RS05795 PF00534 Glycosyl transferases group 1 AMD22_RS05795 PF13439 Glycosyltransferase Family 4 AMD22_RS05800 PF02541 Ppx/GppA phosphatase family AMD22_RS05805 PF02503 Polyphosphate kinase middle domain AMD22_RS05805 PF13089 Polyphosphate kinase N-terminal domain AMD22_RS05805 PF13090 Polyphosphate kinase C-terminal domain AMD22_RS05810 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS05810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS05810 PF11808 AMD22_RS05810 AMD22_RS05815 PF00072 Response regulator receiver domain AMD22_RS05815 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS05820 PF01435 Peptidase family M48 AMD22_RS05825 PF00462 Glutaredoxin AMD22_RS05830 PF02627 Carboxymuconolactone decarboxylase family AMD22_RS05835 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD22_RS05840 PF12811 AMD22_RS05840 AMD22_RS05865 PF13333 AMD22_RS05865 AMD22_RS05875 PF01527 Transposase AMD22_RS05910 PF07275 Antirestriction protein (ArdA) AMD22_RS05930 PF00959 Phage lysozyme AMD22_RS05945 PF04550 AMD22_RS05945 AMD22_RS05960 PF01527 Transposase AMD22_RS05965 PF00665 Integrase core domain AMD22_RS05965 PF13276 AMD22_RS05965 AMD22_RS05970 PF14700 DNA-directed RNA polymerase N-terminal AMD22_RS05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS05990 PF05697 Bacterial trigger factor protein (TF) AMD22_RS05990 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD22_RS05995 PF00574 Clp protease AMD22_RS06000 PF06689 ClpX C4-type zinc finger AMD22_RS06000 PF07724 AAA domain (Cdc48 subfamily) AMD22_RS06000 PF10431 C-terminal, D2-small domain, of ClpB protein AMD22_RS06005 PF00004 ATPase family associated with various cellular activities (AAA) AMD22_RS06005 PF02190 ATP-dependent protease La (LON) domain AMD22_RS06005 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD22_RS06010 PF00216 Bacterial DNA-binding protein AMD22_RS06030 PF13145 PPIC-type PPIASE domain AMD22_RS06030 PF13616 PPIC-type PPIASE domain AMD22_RS06030 PF13623 AMD22_RS06030 AMD22_RS06035 PF01464 Transglycosylase SLT domain AMD22_RS06035 PF01476 LysM domain AMD22_RS06040 PF00753 Metallo-beta-lactamase superfamily AMD22_RS06040 PF16123 AMD22_RS06040 AMD22_RS06050 PF00075 RNase H AMD22_RS06055 PF00929 Exonuclease AMD22_RS06060 PF13672 Protein phosphatase 2C AMD22_RS06075 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD22_RS06080 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family AMD22_RS06085 PF12706 Beta-lactamase superfamily domain AMD22_RS06090 PF04055 Radical SAM superfamily AMD22_RS06090 PF06463 Molybdenum Cofactor Synthesis C AMD22_RS06090 PF13353 4Fe-4S single cluster domain AMD22_RS06100 PF01967 MoaC family AMD22_RS06105 PF02597 ThiS family AMD22_RS06110 PF02391 MoaE protein AMD22_RS06115 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS06120 PF01527 Transposase AMD22_RS06130 PF13333 AMD22_RS06130 AMD22_RS06135 PF03389 MobA/MobL family AMD22_RS06150 PF00589 Phage integrase family AMD22_RS06160 PF12169 DNA polymerase III subunits gamma and tau domain III AMD22_RS06160 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD22_RS06160 PF13177 DNA polymerase III, delta subunit AMD22_RS06165 PF02575 YbaB/EbfC DNA-binding family AMD22_RS06170 PF02132 RecR protein AMD22_RS06170 PF13662 Toprim domain AMD22_RS06175 PF01230 HIT domain AMD22_RS06180 PF03843 AMD22_RS06180 AMD22_RS06190 PF01882 AMD22_RS06190 AMD22_RS06195 PF07726 ATPase family associated with various cellular activities (AAA) AMD22_RS06200 PF13231 AMD22_RS06200 AMD22_RS06215 PF02545 Maf-like protein AMD22_RS06220 PF02620 AMD22_RS06220 AMD22_RS06225 PF01783 Ribosomal L32p protein family AMD22_RS06230 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD22_RS06230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD22_RS06235 PF08670 AMD22_RS06235 AMD22_RS06240 PF00698 Acyl transferase domain AMD22_RS06245 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS06250 PF00550 Phosphopantetheine attachment site AMD22_RS06255 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD22_RS06255 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD22_RS06260 PF00425 chorismate binding enzyme AMD22_RS06265 PF02618 YceG-like family AMD22_RS06270 PF13177 DNA polymerase III, delta subunit AMD22_RS06275 PF07238 PilZ domain AMD22_RS06290 PF00158 Sigma-54 interaction domain AMD22_RS06290 PF02954 Bacterial regulatory protein, Fis family AMD22_RS06290 PF06506 Propionate catabolism activator AMD22_RS06295 PF13714 Phosphoenolpyruvate phosphomutase AMD22_RS06300 PF00285 Citrate synthase AMD22_RS06305 PF00330 Aconitase family (aconitate hydratase) AMD22_RS06305 PF00694 Aconitase C-terminal domain AMD22_RS06310 PF03693 Uncharacterised protein family (UPF0156) AMD22_RS06315 PF04303 PrpF protein AMD22_RS06320 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS06325 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD22_RS06330 PF00207 Alpha-2-macroglobulin family AMD22_RS06330 PF01835 MG2 domain AMD22_RS06330 PF07703 Alpha-2-macroglobulin family N-terminal region AMD22_RS06330 PF11974 Alpha-2-macroglobulin MG1 domain AMD22_RS06335 PF00593 TonB dependent receptor AMD22_RS06335 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS06340 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD22_RS06340 PF16387 AMD22_RS06340 AMD22_RS06345 PF00905 Penicillin binding protein transpeptidase domain AMD22_RS06345 PF00912 Transglycosylase AMD22_RS06345 PF06832 AMD22_RS06345 AMD22_RS06350 PF00210 Ferritin-like domain AMD22_RS06355 PF08534 Redoxin AMD22_RS06360 PF00011 Hsp20/alpha crystallin family AMD22_RS06365 PF00226 DnaJ domain AMD22_RS06365 PF01556 DnaJ C terminal domain AMD22_RS06370 PF00072 Response regulator receiver domain AMD22_RS06375 PF01145 SPFH domain / Band 7 family AMD22_RS06380 PF01145 SPFH domain / Band 7 family AMD22_RS06385 PF01797 Transposase IS200 like AMD22_RS06390 PF00709 Adenylosuccinate synthetase AMD22_RS06395 PF01433 Peptidase family M1 AMD22_RS06395 PF11838 ERAP1-like C-terminal domain AMD22_RS06405 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS06410 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS06450 PF05016 Plasmid stabilisation system protein AMD22_RS06460 PF00069 Protein kinase domain AMD22_RS06470 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS06475 PF00300 Histidine phosphatase superfamily (branch 1) AMD22_RS06480 PF01256 Carbohydrate kinase AMD22_RS06485 PF02055 O-Glycosyl hydrolase family 30 AMD22_RS06485 PF17189 AMD22_RS06485 AMD22_RS06490 PF00723 Glycosyl hydrolases family 15 AMD22_RS06495 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS06500 PF07971 Glycosyl hydrolase family 92 AMD22_RS06505 PF00106 short chain dehydrogenase AMD22_RS06515 PF13532 2OG-Fe(II) oxygenase superfamily AMD22_RS06520 PF00027 Cyclic nucleotide-binding domain AMD22_RS06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS06525 PF02148 Zn-finger in ubiquitin-hydrolases and other protein AMD22_RS06530 PF00563 EAL domain AMD22_RS06535 PF13328 HD domain AMD22_RS06540 PF00005 ABC transporter AMD22_RS06545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD22_RS06545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD22_RS06550 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD22_RS06550 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD22_RS06555 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD22_RS06555 PF01799 [2Fe-2S] binding domain AMD22_RS06560 PF05559 AMD22_RS06560 AMD22_RS06570 PF07883 Cupin domain AMD22_RS06580 PF02661 Fic/DOC family AMD22_RS06585 PF04014 Antidote-toxin recognition MazE AMD22_RS06590 PF00717 Peptidase S24-like AMD22_RS06590 PF01726 LexA DNA binding domain AMD22_RS06600 PF00817 impB/mucB/samB family AMD22_RS06605 PF02811 PHP domain AMD22_RS06605 PF07733 Bacterial DNA polymerase III alpha subunit AMD22_RS06605 PF14579 Helix-hairpin-helix motif AMD22_RS06610 PF00326 Prolyl oligopeptidase family AMD22_RS06615 PF08668 HDOD domain AMD22_RS06620 PF03169 AMD22_RS06620 AMD22_RS06625 PF13557 AMD22_RS06625 AMD22_RS06635 PF00326 Prolyl oligopeptidase family AMD22_RS06635 PF07676 WD40-like Beta Propeller Repeat AMD22_RS06650 PF08448 PAS fold AMD22_RS06650 PF12833 Helix-turn-helix domain AMD22_RS06665 PF00199 Catalase AMD22_RS06665 PF06628 Catalase-related immune-responsive AMD22_RS06670 PF00248 Aldo/keto reductase family AMD22_RS06675 PF00135 Carboxylesterase family AMD22_RS06680 PF02347 Glycine cleavage system P-protein AMD22_RS06685 PF07690 Major Facilitator Superfamily AMD22_RS06695 PF01401 Angiotensin-converting enzyme AMD22_RS06700 PF00884 Sulfatase AMD22_RS06700 PF08019 AMD22_RS06700 AMD22_RS06705 PF01569 PAP2 superfamily AMD22_RS06710 PF13231 AMD22_RS06710 AMD22_RS06715 PF00072 Response regulator receiver domain AMD22_RS06715 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS06720 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS06730 PF03776 Septum formation topological specificity factor MinE AMD22_RS06735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD22_RS06740 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD22_RS06740 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD22_RS06745 PF00583 Acetyltransferase (GNAT) family AMD22_RS06755 PF07730 Histidine kinase AMD22_RS06760 PF00072 Response regulator receiver domain AMD22_RS06760 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS06765 PF10604 Polyketide cyclase / dehydrase and lipid transport AMD22_RS06770 PF04241 AMD22_RS06770 AMD22_RS06775 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD22_RS06780 PF02557 D-alanyl-D-alanine carboxypeptidase AMD22_RS06795 PF01145 SPFH domain / Band 7 family AMD22_RS06800 PF02222 ATP-grasp domain AMD22_RS06805 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS06810 PF04376 AMD22_RS06810 AMD22_RS06810 PF04377 AMD22_RS06810 AMD22_RS06815 PF13202 EF hand AMD22_RS06815 PF13499 EF-hand domain pair AMD22_RS06825 PF09413 Domain of unknown function (DUF2007) AMD22_RS06830 PF13622 Thioesterase-like superfamily AMD22_RS06835 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS06840 PF04314 Protein of unknown function (DUF461) AMD22_RS06845 PF13279 Thioesterase-like superfamily AMD22_RS06850 PF00005 ABC transporter AMD22_RS06855 PF00829 Ribosomal prokaryotic L21 protein AMD22_RS06860 PF01016 Ribosomal L27 protein AMD22_RS06865 PF01018 GTP1/OBG AMD22_RS06865 PF01926 50S ribosome-binding GTPase AMD22_RS06870 PF01649 Ribosomal protein S20 AMD22_RS06875 PF03023 AMD22_RS06875 AMD22_RS06880 PF01687 Riboflavin kinase AMD22_RS06880 PF06574 FAD synthetase AMD22_RS06885 PF00133 tRNA synthetases class I (I, L, M and V) AMD22_RS06885 PF06827 Zinc finger found in FPG and IleRS AMD22_RS06885 PF08264 Anticodon-binding domain of tRNA AMD22_RS06890 PF01252 AMD22_RS06890 AMD22_RS06895 PF02401 LytB protein AMD22_RS06905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD22_RS06905 PF06481 COX Aromatic Rich Motif AMD22_RS06910 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD22_RS06915 PF00510 Cytochrome c oxidase subunit III AMD22_RS06920 PF03626 AMD22_RS06920 AMD22_RS06925 PF05299 M61 glycyl aminopeptidase AMD22_RS06925 PF07720 Tetratricopeptide repeat AMD22_RS06930 PF13481 AAA domain AMD22_RS06930 PF13541 Subunit ChlI of Mg-chelatase AMD22_RS06935 PF05656 AMD22_RS06935 AMD22_RS06940 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS06945 PF12833 Helix-turn-helix domain AMD22_RS06950 PF00183 Hsp90 protein AMD22_RS06950 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS06960 PF01740 STAS domain AMD22_RS06960 PF14361 AMD22_RS06960 AMD22_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS06975 PF07228 Stage II sporulation protein E (SpoIIE) AMD22_RS06975 PF13581 Histidine kinase-like ATPase domain AMD22_RS06980 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS06985 PF00072 Response regulator receiver domain AMD22_RS06985 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS06985 PF08448 PAS fold AMD22_RS06990 PF04616 Glycosyl hydrolases family 43 AMD22_RS06995 PF00593 TonB dependent receptor AMD22_RS06995 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS07000 PF00085 Thioredoxin AMD22_RS07005 PF07237 Protein of unknown function (DUF1428) AMD22_RS07010 PF00072 Response regulator receiver domain AMD22_RS07010 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS07015 PF01339 CheB methylesterase AMD22_RS07020 PF01739 CheR methyltransferase, SAM binding domain AMD22_RS07020 PF03705 CheR methyltransferase, all-alpha domain AMD22_RS07025 PF00072 Response regulator receiver domain AMD22_RS07025 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS07025 PF13185 GAF domain AMD22_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS07030 PF13426 PAS domain AMD22_RS07035 PF00072 Response regulator receiver domain AMD22_RS07040 PF00722 Glycosyl hydrolases family 16 AMD22_RS07045 PF06964 Alpha-L-arabinofuranosidase C-terminus AMD22_RS07055 PF01263 Aldose 1-epimerase AMD22_RS07060 PF01578 AMD22_RS07060 AMD22_RS07065 PF00448 SRP54-type protein, GTPase domain AMD22_RS07065 PF02881 SRP54-type protein, helical bundle domain AMD22_RS07065 PF02978 Signal peptide binding domain AMD22_RS07070 PF03060 Nitronate monooxygenase AMD22_RS07075 PF01063 Aminotransferase class IV AMD22_RS07080 PF00886 Ribosomal protein S16 AMD22_RS07085 PF01782 RimM N-terminal domain AMD22_RS07085 PF05239 PRC-barrel domain AMD22_RS07090 PF01746 tRNA (Guanine-1)-methyltransferase AMD22_RS07095 PF01245 Ribosomal protein L19 AMD22_RS07110 PF08279 HTH domain AMD22_RS07110 PF13280 AMD22_RS07110 AMD22_RS07115 PF00043 Glutathione S-transferase, C-terminal domain AMD22_RS07115 PF13417 Glutathione S-transferase, N-terminal domain AMD22_RS07120 PF01479 S4 domain AMD22_RS07125 PF00141 Peroxidase AMD22_RS07130 PF06078 Bacterial protein of unknown function (DUF937) AMD22_RS07135 PF00488 MutS domain V AMD22_RS07135 PF01624 MutS domain I AMD22_RS07135 PF05188 MutS domain II AMD22_RS07135 PF05190 MutS family domain IV AMD22_RS07135 PF05192 MutS domain III AMD22_RS07140 PF05593 AMD22_RS07140 AMD22_RS07145 PF16158 AMD22_RS07145 AMD22_RS07150 PF14085 AMD22_RS07150 AMD22_RS07155 PF00754 F5/8 type C domain AMD22_RS07155 PF01120 Alpha-L-fucosidase AMD22_RS07165 PF00703 Glycosyl hydrolases family 2 AMD22_RS07165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD22_RS07165 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD22_RS07165 PF16355 AMD22_RS07165 AMD22_RS07170 PF07745 Glycosyl hydrolase family 53 AMD22_RS07175 PF00593 TonB dependent receptor AMD22_RS07175 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS07180 PF06114 Domain of unknown function (DUF955) AMD22_RS07180 PF09856 AMD22_RS07180 AMD22_RS07180 PF13560 Helix-turn-helix domain AMD22_RS07185 PF00171 Aldehyde dehydrogenase family AMD22_RS07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS07190 PF02770 Acyl-CoA dehydrogenase, middle domain AMD22_RS07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD22_RS07195 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS07200 PF16113 AMD22_RS07200 AMD22_RS07205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD22_RS07205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD22_RS07210 PF01545 Cation efflux family AMD22_RS07215 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS07215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD22_RS07215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD22_RS07220 PF04542 Sigma-70 region 2 AMD22_RS07220 PF08281 Sigma-70, region 4 AMD22_RS07225 PF03872 Anti sigma-E protein RseA, N-terminal domain AMD22_RS07230 PF13180 PDZ domain AMD22_RS07230 PF13365 Trypsin-like peptidase domain AMD22_RS07235 PF00009 Elongation factor Tu GTP binding domain AMD22_RS07235 PF00679 Elongation factor G C-terminus AMD22_RS07235 PF03144 Elongation factor Tu domain 2 AMD22_RS07235 PF06421 GTP-binding protein LepA C-terminus AMD22_RS07240 PF00717 Peptidase S24-like AMD22_RS07245 PF16137 AMD22_RS07245 AMD22_RS07250 PF00035 Double-stranded RNA binding motif AMD22_RS07250 PF14622 Ribonuclease-III-like AMD22_RS07255 PF01926 50S ribosome-binding GTPase AMD22_RS07255 PF07650 KH domain AMD22_RS07260 PF02565 Recombination protein O C terminal AMD22_RS07260 PF11967 Recombination protein O N terminal AMD22_RS07265 PF00072 Response regulator receiver domain AMD22_RS07265 PF01627 Hpt domain AMD22_RS07270 PF05958 tRNA (Uracil-5-)-methyltransferase AMD22_RS07275 PF01928 CYTH domain AMD22_RS07280 PF01323 DSBA-like thioredoxin domain AMD22_RS07285 PF13450 NAD(P)-binding Rossmann-like domain AMD22_RS07290 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD22_RS07295 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD22_RS07300 PF00156 Phosphoribosyl transferase domain AMD22_RS07305 PF01048 Phosphorylase superfamily AMD22_RS07310 PF00313 'Cold-shock' DNA-binding domain AMD22_RS07315 PF01494 FAD binding domain AMD22_RS07320 PF00149 Calcineurin-like phosphoesterase AMD22_RS07325 PF00270 DEAD/DEAH box helicase AMD22_RS07325 PF00271 Helicase conserved C-terminal domain AMD22_RS07325 PF08494 AMD22_RS07325 AMD22_RS07330 PF01068 ATP dependent DNA ligase domain AMD22_RS07330 PF04675 DNA ligase N terminus AMD22_RS07330 PF04679 ATP dependent DNA ligase C terminal region AMD22_RS07350 PF04519 AMD22_RS07350 AMD22_RS07355 PF00990 GGDEF domain AMD22_RS07355 PF05227 CHASE3 domain AMD22_RS07355 PF13185 GAF domain AMD22_RS07370 PF00108 Thiolase, N-terminal domain AMD22_RS07370 PF02803 Thiolase, C-terminal domain AMD22_RS07375 PF00082 Subtilase family AMD22_RS07375 PF03797 Autotransporter beta-domain AMD22_RS07375 PF12951 AMD22_RS07375 AMD22_RS07380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD22_RS07380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD22_RS07385 PF13640 2OG-Fe(II) oxygenase superfamily AMD22_RS07390 PF01863 Protein of unknown function DUF45 AMD22_RS07395 PF07043 AMD22_RS07395 AMD22_RS07400 PF10982 Protein of unknown function (DUF2789) AMD22_RS07405 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD22_RS07410 PF00924 Mechanosensitive ion channel AMD22_RS07425 PF06723 MreB/Mbl protein AMD22_RS07430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD22_RS07435 PF01545 Cation efflux family AMD22_RS07440 PF03831 PhnA protein AMD22_RS07440 PF08274 PhnA Zinc-Ribbon AMD22_RS07445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD22_RS07450 PF07690 Major Facilitator Superfamily AMD22_RS07460 PF09537 Domain of unknown function (DUF2383) AMD22_RS07465 PF13563 2'-5' RNA ligase superfamily AMD22_RS07475 PF09791 AMD22_RS07475 AMD22_RS07480 PF06057 Bacterial virulence protein (VirJ) AMD22_RS07485 PF03706 AMD22_RS07485 AMD22_RS07485 PF09924 Uncharacterized conserved protein (DUF2156) AMD22_RS07490 PF06197 AMD22_RS07490 AMD22_RS07495 PF01042 Endoribonuclease L-PSP AMD22_RS07500 PF02353 Mycolic acid cyclopropane synthetase AMD22_RS07505 PF06966 AMD22_RS07505 AMD22_RS07510 PF11086 AMD22_RS07510 AMD22_RS07515 PF02353 Mycolic acid cyclopropane synthetase AMD22_RS07520 PF07103 AMD22_RS07520 AMD22_RS07525 PF01593 Flavin containing amine oxidoreductase AMD22_RS07530 PF00487 AMD22_RS07530 AMD22_RS07535 PF10099 AMD22_RS07535 AMD22_RS07540 PF04542 Sigma-70 region 2 AMD22_RS07540 PF08281 Sigma-70, region 4 AMD22_RS07560 PF04060 Putative Fe-S cluster AMD22_RS07560 PF14697 4Fe-4S dicluster domain AMD22_RS07565 PF12710 haloacid dehalogenase-like hydrolase AMD22_RS07570 PF01588 Putative tRNA binding domain AMD22_RS07570 PF09334 tRNA synthetases class I (M) AMD22_RS07575 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD22_RS07580 PF01433 Peptidase family M1 AMD22_RS07580 PF12679 AMD22_RS07580 AMD22_RS07585 PF00005 ABC transporter AMD22_RS07590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS07595 PF00324 Amino acid permease AMD22_RS07600 PF02574 Homocysteine S-methyltransferase AMD22_RS07605 PF05960 Bacterial protein of unknown function (DUF885) AMD22_RS07610 PF02592 AMD22_RS07610 AMD22_RS07615 PF04367 AMD22_RS07615 AMD22_RS07625 PF13372 Alginate export AMD22_RS07630 PF03551 Transcriptional regulator PadR-like family AMD22_RS07635 PF13796 AMD22_RS07635 AMD22_RS07640 PF06850 AMD22_RS07640 AMD22_RS07645 PF13489 Methyltransferase domain AMD22_RS07650 PF03653 AMD22_RS07650 AMD22_RS07660 PF14559 Tetratricopeptide repeat AMD22_RS07665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD22_RS07670 PF01336 OB-fold nucleic acid binding domain AMD22_RS07670 PF02811 PHP domain AMD22_RS07670 PF07733 Bacterial DNA polymerase III alpha subunit AMD22_RS07670 PF14579 Helix-hairpin-helix motif AMD22_RS07675 PF01351 Ribonuclease HII AMD22_RS07680 PF02684 AMD22_RS07680 AMD22_RS07685 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS07685 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD22_RS07690 PF07977 FabA-like domain AMD22_RS07695 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS07695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD22_RS07705 PF01103 Surface antigen AMD22_RS07705 PF07244 Surface antigen variable number repeat AMD22_RS07710 PF02163 Peptidase family M50 AMD22_RS07715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD22_RS07715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AMD22_RS07715 PF13288 DXP reductoisomerase C-terminal domain AMD22_RS07720 PF01148 Cytidylyltransferase family AMD22_RS07725 PF01255 Putative undecaprenyl diphosphate synthase AMD22_RS07730 PF01765 Ribosome recycling factor AMD22_RS07735 PF00696 Amino acid kinase family AMD22_RS07740 PF00990 GGDEF domain AMD22_RS07740 PF08668 HDOD domain AMD22_RS07745 PF00889 Elongation factor TS AMD22_RS07750 PF00318 Ribosomal protein S2 AMD22_RS07755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD22_RS07765 PF05229 AMD22_RS07765 AMD22_RS07770 PF00577 Outer membrane usher protein AMD22_RS07770 PF13953 PapC C-terminal domain AMD22_RS07775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD22_RS07780 PF05229 AMD22_RS07780 AMD22_RS07785 PF00557 Metallopeptidase family M24 AMD22_RS07790 PF01909 Nucleotidyltransferase domain AMD22_RS07790 PF01966 HD domain AMD22_RS07790 PF08335 GlnD PII-uridylyltransferase AMD22_RS07795 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS07795 PF14602 Hexapeptide repeat of succinyl-transferase AMD22_RS07795 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD22_RS07800 PF03960 ArsC family AMD22_RS07805 PF01546 Peptidase family M20/M25/M40 AMD22_RS07805 PF07687 Peptidase dimerisation domain AMD22_RS07810 PF00733 Asparagine synthase AMD22_RS07810 PF13537 Glutamine amidotransferase domain AMD22_RS07815 PF13229 Right handed beta helix region AMD22_RS07820 PF00593 TonB dependent receptor AMD22_RS07820 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS07835 PF00210 Ferritin-like domain AMD22_RS07840 PF05724 Thiopurine S-methyltransferase (TPMT) AMD22_RS07850 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD22_RS07850 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD22_RS07855 PF02311 AraC-like ligand binding domain AMD22_RS07855 PF12833 Helix-turn-helix domain AMD22_RS07860 PF01047 MarR family AMD22_RS07865 PF02321 Outer membrane efflux protein AMD22_RS07870 PF00529 HlyD family secretion protein AMD22_RS07870 PF16576 AMD22_RS07870 AMD22_RS07875 PF07690 Major Facilitator Superfamily AMD22_RS07885 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD22_RS07885 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD22_RS07885 PF14310 Fibronectin type III-like domain AMD22_RS07890 PF00246 Zinc carboxypeptidase AMD22_RS07895 PF00854 POT family AMD22_RS07900 PF01694 Rhomboid family AMD22_RS07910 PF14542 GCN5-related N-acetyl-transferase AMD22_RS07915 PF13739 Domain of unknown function (DUF4163) AMD22_RS07920 PF01047 MarR family AMD22_RS07925 PF01432 Peptidase family M3 AMD22_RS07930 PF00255 Glutathione peroxidase AMD22_RS07935 PF00175 Oxidoreductase NAD-binding domain AMD22_RS07935 PF00970 Oxidoreductase FAD-binding domain AMD22_RS07940 PF00005 ABC transporter AMD22_RS07945 PF05681 AMD22_RS07945 AMD22_RS07945 PF05683 Fumarase C-terminus AMD22_RS07950 PF02798 Glutathione S-transferase, N-terminal domain AMD22_RS07950 PF14497 Glutathione S-transferase, C-terminal domain AMD22_RS07955 PF00484 Carbonic anhydrase AMD22_RS07960 PF02253 Phospholipase A1 AMD22_RS07965 PF04306 AMD22_RS07965 AMD22_RS07970 PF00313 'Cold-shock' DNA-binding domain AMD22_RS07975 PF05433 AMD22_RS07975 AMD22_RS07980 PF01322 Cytochrome C' AMD22_RS07985 PF00899 ThiF family AMD22_RS07990 PF01026 TatD related DNase AMD22_RS08000 PF05433 AMD22_RS08000 AMD22_RS08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS08005 PF02770 Acyl-CoA dehydrogenase, middle domain AMD22_RS08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD22_RS08010 PF01841 Transglutaminase-like superfamily AMD22_RS08010 PF12969 Domain of Unknown Function with PDB structure (DUF3857) AMD22_RS08015 PF00043 Glutathione S-transferase, C-terminal domain AMD22_RS08015 PF02798 Glutathione S-transferase, N-terminal domain AMD22_RS08025 PF00733 Asparagine synthase AMD22_RS08025 PF13537 Glutamine amidotransferase domain AMD22_RS08030 PF03358 NADPH-dependent FMN reductase AMD22_RS08035 PF00772 DnaB-like helicase N terminal domain AMD22_RS08035 PF03796 DnaB-like helicase C terminal domain AMD22_RS08040 PF00875 DNA photolyase AMD22_RS08040 PF03441 FAD binding domain of DNA photolyase AMD22_RS08045 PF00691 OmpA family AMD22_RS08045 PF13488 AMD22_RS08045 AMD22_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS08050 PF03466 LysR substrate binding domain AMD22_RS08060 PF00106 short chain dehydrogenase AMD22_RS08065 PF16576 AMD22_RS08065 AMD22_RS08070 PF00873 AcrB/AcrD/AcrF family AMD22_RS08075 PF00106 short chain dehydrogenase AMD22_RS08080 PF02321 Outer membrane efflux protein AMD22_RS08085 PF00990 GGDEF domain AMD22_RS08095 PF00990 GGDEF domain AMD22_RS08095 PF05227 CHASE3 domain AMD22_RS08095 PF13185 GAF domain AMD22_RS08110 PF01381 Helix-turn-helix AMD22_RS08115 PF06114 Domain of unknown function (DUF955) AMD22_RS08125 PF00816 H-NS histone family AMD22_RS08135 PF00589 Phage integrase family AMD22_RS08150 PF01381 Helix-turn-helix AMD22_RS08160 PF01527 Transposase AMD22_RS08165 PF00665 Integrase core domain AMD22_RS08170 PF03389 MobA/MobL family AMD22_RS08175 PF13910 AMD22_RS08175 AMD22_RS08195 PF00082 Subtilase family AMD22_RS08200 PF01668 SmpB protein AMD22_RS08205 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD22_RS08210 PF03658 RnfH family Ubiquitin AMD22_RS08215 PF04355 SmpA / OmlA family AMD22_RS08220 PF01475 Ferric uptake regulator family AMD22_RS08225 PF02463 RecF/RecN/SMC N terminal domain AMD22_RS08230 PF01628 HrcA protein C terminal domain AMD22_RS08230 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD22_RS08235 PF01025 GrpE AMD22_RS08240 PF00012 Hsp70 protein AMD22_RS08245 PF00226 DnaJ domain AMD22_RS08245 PF00684 DnaJ central domain AMD22_RS08245 PF01556 DnaJ C terminal domain AMD22_RS08250 PF08543 Phosphomethylpyrimidine kinase AMD22_RS08255 PF01842 ACT domain AMD22_RS08255 PF02153 Prephenate dehydrogenase AMD22_RS08265 PF02321 Outer membrane efflux protein AMD22_RS08270 PF16576 AMD22_RS08270 AMD22_RS08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS08280 PF03466 LysR substrate binding domain AMD22_RS08285 PF00005 ABC transporter AMD22_RS08285 PF00664 ABC transporter transmembrane region AMD22_RS08290 PF01205 Uncharacterized protein family UPF0029 AMD22_RS08290 PF09186 Domain of unknown function (DUF1949) AMD22_RS08295 PF03641 Possible lysine decarboxylase AMD22_RS08300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD22_RS08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS08305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD22_RS08305 PF00364 Biotin-requiring enzyme AMD22_RS08305 PF02817 e3 binding domain AMD22_RS08310 PF00676 Dehydrogenase E1 component AMD22_RS08310 PF02779 Transketolase, pyrimidine binding domain AMD22_RS08310 PF16078 AMD22_RS08310 AMD22_RS08310 PF16870 AMD22_RS08310 AMD22_RS08315 PF13673 Acetyltransferase (GNAT) domain AMD22_RS08320 PF08007 Cupin superfamily protein AMD22_RS08325 PF11259 AMD22_RS08325 AMD22_RS08330 PF00206 Lyase AMD22_RS08330 PF08328 Adenylosuccinate lyase C-terminal AMD22_RS08335 PF00188 Cysteine-rich secretory protein family AMD22_RS08340 PF00571 CBS domain AMD22_RS08340 PF01595 AMD22_RS08340 AMD22_RS08340 PF03471 Transporter associated domain AMD22_RS08345 PF00206 Lyase AMD22_RS08345 PF10415 Fumarase C C-terminus AMD22_RS08355 PF11101 AMD22_RS08355 AMD22_RS08370 PF00005 ABC transporter AMD22_RS08375 PF00392 Bacterial regulatory proteins, gntR family AMD22_RS08380 PF00255 Glutathione peroxidase AMD22_RS08385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD22_RS08385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD22_RS08390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD22_RS08390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD22_RS08390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD22_RS08395 PF04102 SlyX AMD22_RS08400 PF09831 AMD22_RS08400 AMD22_RS08405 PF13557 AMD22_RS08405 AMD22_RS08410 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS08410 PF13377 Periplasmic binding protein-like domain AMD22_RS08415 PF07690 Major Facilitator Superfamily AMD22_RS08420 PF00294 pfkB family carbohydrate kinase AMD22_RS08425 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) AMD22_RS08430 PF00809 Pterin binding enzyme AMD22_RS08430 PF02310 B12 binding domain AMD22_RS08430 PF02607 B12 binding domain AMD22_RS08430 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD22_RS08435 PF02574 Homocysteine S-methyltransferase AMD22_RS08440 PF01022 Bacterial regulatory protein, arsR family AMD22_RS08440 PF08241 Methyltransferase domain AMD22_RS08445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS08445 PF02770 Acyl-CoA dehydrogenase, middle domain AMD22_RS08445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD22_RS08450 PF13472 GDSL-like Lipase/Acylhydrolase family AMD22_RS08460 PF00575 S1 RNA binding domain AMD22_RS08460 PF00773 RNB domain AMD22_RS08460 PF08206 Ribonuclease B OB domain AMD22_RS08465 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD22_RS08470 PF00588 SpoU rRNA Methylase family AMD22_RS08470 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD22_RS08475 PF00990 GGDEF domain AMD22_RS08475 PF07494 Two component regulator propeller AMD22_RS08475 PF07495 Y_Y_Y domain AMD22_RS08480 PF00929 Exonuclease AMD22_RS08485 PF11776 Domain of unknown function (DUF3315) AMD22_RS08490 PF01895 PhoU domain AMD22_RS08495 PF00005 ABC transporter AMD22_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS08505 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS08510 PF12849 PBP superfamily domain AMD22_RS08515 PF12849 PBP superfamily domain AMD22_RS08520 PF07396 Phosphate-selective porin O and P AMD22_RS08530 PF00484 Carbonic anhydrase AMD22_RS08535 PF00916 AMD22_RS08535 AMD22_RS08540 PF00633 Helix-hairpin-helix motif AMD22_RS08540 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD22_RS08550 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS08555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD22_RS08555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD22_RS08560 PF00293 NUDIX domain AMD22_RS08560 PF06945 AMD22_RS08560 AMD22_RS08565 PF00581 Rhodanese-like domain AMD22_RS08570 PF07920 Protein of unknown function (DUF1684) AMD22_RS08575 PF01510 N-acetylmuramoyl-L-alanine amidase AMD22_RS08580 PF03473 MOSC domain AMD22_RS08585 PF05728 Uncharacterised protein family (UPF0227) AMD22_RS08590 PF00583 Acetyltransferase (GNAT) family AMD22_RS08595 PF00005 ABC transporter AMD22_RS08600 PF01170 Putative RNA methylase family UPF0020 AMD22_RS08600 PF02926 THUMP domain AMD22_RS08600 PF10672 S-adenosylmethionine-dependent methyltransferase AMD22_RS08605 PF01513 ATP-NAD kinase AMD22_RS08610 PF06189 AMD22_RS08610 AMD22_RS08615 PF11159 AMD22_RS08615 AMD22_RS08625 PF09365 AMD22_RS08625 AMD22_RS08630 PF00929 Exonuclease AMD22_RS08630 PF08411 Exonuclease C-terminal AMD22_RS08635 PF01494 FAD binding domain AMD22_RS08640 PF00266 Aminotransferase class-V AMD22_RS08645 PF12805 AMD22_RS08645 AMD22_RS08645 PF13515 AMD22_RS08645 AMD22_RS08650 PF06052 3-hydroxyanthranilic acid dioxygenase AMD22_RS08655 PF00484 Carbonic anhydrase AMD22_RS08660 PF05838 Glycosyl hydrolase 108 AMD22_RS08660 PF09374 Predicted Peptidoglycan domain AMD22_RS08665 PF11655 AMD22_RS08665 AMD22_RS08670 PF11655 AMD22_RS08670 AMD22_RS08700 PF00072 Response regulator receiver domain AMD22_RS08700 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS08705 PF00161 Ribosome inactivating protein AMD22_RS08715 PF04299 Putative FMN-binding domain AMD22_RS08735 PF00152 tRNA synthetases class II (D, K and N) AMD22_RS08735 PF01336 OB-fold nucleic acid binding domain AMD22_RS08740 PF01521 Iron-sulphur cluster biosynthesis AMD22_RS08745 PF01250 Ribosomal protein S6 AMD22_RS08750 PF01084 Ribosomal protein S18 AMD22_RS08755 PF01281 Ribosomal protein L9, N-terminal domain AMD22_RS08755 PF03948 Ribosomal protein L9, C-terminal domain AMD22_RS08760 PF02463 RecF/RecN/SMC N terminal domain AMD22_RS08765 PF04354 ZipA, C-terminal FtsZ-binding domain AMD22_RS08775 PF00155 Aminotransferase class I and II AMD22_RS08780 PF00533 BRCA1 C Terminus (BRCT) domain AMD22_RS08780 PF01653 NAD-dependent DNA ligase adenylation domain AMD22_RS08780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD22_RS08780 PF03120 NAD-dependent DNA ligase OB-fold domain AMD22_RS08780 PF12826 Helix-hairpin-helix motif AMD22_RS08785 PF00152 tRNA synthetases class II (D, K and N) AMD22_RS08790 PF11218 AMD22_RS08790 AMD22_RS08795 PF01008 Initiation factor 2 subunit family AMD22_RS08800 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD22_RS08800 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD22_RS08805 PF01011 PQQ enzyme repeat AMD22_RS08805 PF13360 PQQ-like domain AMD22_RS08815 PF01175 Urocanase AMD22_RS08820 PF05013 N-formylglutamate amidohydrolase AMD22_RS08825 PF00221 Aromatic amino acid lyase AMD22_RS08830 PF07969 Amidohydrolase family AMD22_RS08835 PF01979 Amidohydrolase family AMD22_RS08845 PF00392 Bacterial regulatory proteins, gntR family AMD22_RS08845 PF07702 UTRA domain AMD22_RS08850 PF04471 Restriction endonuclease AMD22_RS08860 PF05597 AMD22_RS08860 AMD22_RS08865 PF09650 AMD22_RS08865 AMD22_RS08870 PF16697 AMD22_RS08870 AMD22_RS08875 PF01794 AMD22_RS08875 AMD22_RS08880 PF00174 Oxidoreductase molybdopterin binding domain AMD22_RS08885 PF00266 Aminotransferase class-V AMD22_RS08890 PF00800 Prephenate dehydratase AMD22_RS08890 PF01817 Chorismate mutase type II AMD22_RS08890 PF01842 ACT domain AMD22_RS08895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD22_RS08900 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS08905 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS08910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD22_RS08910 PF02403 Seryl-tRNA synthetase N-terminal domain AMD22_RS08915 PF02525 Flavodoxin-like fold AMD22_RS08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS08920 PF03466 LysR substrate binding domain AMD22_RS08930 PF04343 AMD22_RS08930 AMD22_RS08935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS08935 PF00672 HAMP domain AMD22_RS08935 PF12729 AMD22_RS08935 AMD22_RS08940 PF01494 FAD binding domain AMD22_RS08945 PF01047 MarR family AMD22_RS08960 PF00072 Response regulator receiver domain AMD22_RS08960 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS08960 PF00989 PAS fold AMD22_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS08960 PF08447 PAS fold AMD22_RS08960 PF08448 PAS fold AMD22_RS08965 PF00072 Response regulator receiver domain AMD22_RS08970 PF06745 KaiC AMD22_RS08975 PF00072 Response regulator receiver domain AMD22_RS08975 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS08975 PF08448 PAS fold AMD22_RS08985 PF03918 Cytochrome C biogenesis protein AMD22_RS08990 PF00578 AhpC/TSA family AMD22_RS08995 PF01578 AMD22_RS08995 AMD22_RS08995 PF16327 AMD22_RS08995 AMD22_RS09000 PF03100 CcmE AMD22_RS09005 PF04995 AMD22_RS09005 AMD22_RS09010 PF01578 AMD22_RS09010 AMD22_RS09015 PF00082 Subtilase family AMD22_RS09020 PF13490 Putative zinc-finger AMD22_RS09025 PF04542 Sigma-70 region 2 AMD22_RS09025 PF08281 Sigma-70, region 4 AMD22_RS09040 PF00034 Cytochrome c AMD22_RS09050 PF01292 Prokaryotic cytochrome b561 AMD22_RS09055 PF05523 WxcM-like, C-terminal AMD22_RS09060 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS09070 PF13480 Acetyltransferase (GNAT) domain AMD22_RS09075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD22_RS09080 PF13440 AMD22_RS09080 AMD22_RS09085 PF00535 Glycosyl transferase family 2 AMD22_RS09095 PF02706 Chain length determinant protein AMD22_RS09100 PF13649 Methyltransferase domain AMD22_RS09105 PF01979 Amidohydrolase family AMD22_RS09110 PF08241 Methyltransferase domain AMD22_RS09115 PF00534 Glycosyl transferases group 1 AMD22_RS09115 PF13439 Glycosyltransferase Family 4 AMD22_RS09120 PF00534 Glycosyl transferases group 1 AMD22_RS09120 PF13579 Glycosyl transferase 4-like domain AMD22_RS09125 PF14907 Uncharacterised nucleotidyltransferase AMD22_RS09130 PF04055 Radical SAM superfamily AMD22_RS09140 PF00005 ABC transporter AMD22_RS09140 PF00664 ABC transporter transmembrane region AMD22_RS09145 PF00083 Sugar (and other) transporter AMD22_RS09150 PF00296 Luciferase-like monooxygenase AMD22_RS09155 PF16242 AMD22_RS09155 AMD22_RS09160 PF06055 AMD22_RS09160 AMD22_RS09165 PF00571 CBS domain AMD22_RS09165 PF01595 AMD22_RS09165 AMD22_RS09165 PF03471 Transporter associated domain AMD22_RS09170 PF01865 Protein of unknown function DUF47 AMD22_RS09175 PF01384 AMD22_RS09175 AMD22_RS09180 PF02698 DUF218 domain AMD22_RS09185 PF00450 Serine carboxypeptidase AMD22_RS09190 PF00204 DNA gyrase B AMD22_RS09190 PF00986 DNA gyrase B subunit, carboxyl terminus AMD22_RS09190 PF01751 Toprim domain AMD22_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS09200 PF00117 Glutamine amidotransferase class-I AMD22_RS09200 PF06418 CTP synthase N-terminus AMD22_RS09205 PF00793 DAHP synthetase I family AMD22_RS09215 PF00113 Enolase, C-terminal TIM barrel domain AMD22_RS09215 PF03952 Enolase, N-terminal domain AMD22_RS09220 PF04977 Septum formation initiator AMD22_RS09225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD22_RS09230 PF02542 YgbB family AMD22_RS09235 PF01142 tRNA pseudouridine synthase D (TruD) AMD22_RS09240 PF01713 Smr domain AMD22_RS09245 PF01975 Survival protein SurE AMD22_RS09250 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD22_RS09260 PF01476 LysM domain AMD22_RS09260 PF01551 Peptidase family M23 AMD22_RS09265 PF04430 Protein of unknown function (DUF498/DUF598) AMD22_RS09270 PF01985 CRS1 / YhbY (CRM) domain AMD22_RS09275 PF01728 FtsJ-like methyltransferase AMD22_RS09280 PF00004 ATPase family associated with various cellular activities (AAA) AMD22_RS09280 PF01434 Peptidase family M41 AMD22_RS09280 PF06480 FtsH Extracellular AMD22_RS09285 PF00809 Pterin binding enzyme AMD22_RS09290 PF01715 IPP transferase AMD22_RS09300 PF01926 50S ribosome-binding GTPase AMD22_RS09300 PF13167 AMD22_RS09300 AMD22_RS09300 PF16360 AMD22_RS09300 AMD22_RS09305 PF02464 Competence-damaged protein AMD22_RS09310 PF03109 AMD22_RS09310 AMD22_RS09315 PF00717 Peptidase S24-like AMD22_RS09315 PF01726 LexA DNA binding domain AMD22_RS09320 PF00154 recA bacterial DNA recombination protein AMD22_RS09325 PF02631 RecX family AMD22_RS09330 PF01411 tRNA synthetases class II (A) AMD22_RS09330 PF02272 DHHA1 domain AMD22_RS09330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD22_RS09335 PF02599 Global regulator protein family AMD22_RS09345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS09345 PF08447 PAS fold AMD22_RS09345 PF08448 PAS fold AMD22_RS09350 PF02678 Pirin AMD22_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS09360 PF03466 LysR substrate binding domain AMD22_RS09365 PF00581 Rhodanese-like domain AMD22_RS09365 PF09335 AMD22_RS09365 AMD22_RS09380 PF12146 Putative lysophospholipase AMD22_RS09385 PF08543 Phosphomethylpyrimidine kinase AMD22_RS09390 PF06912 AMD22_RS09390 AMD22_RS09400 PF02562 PhoH-like protein AMD22_RS09400 PF13638 PIN domain AMD22_RS09405 PF00578 AhpC/TSA family AMD22_RS09410 PF06877 Regulator of ribonuclease activity B AMD22_RS09415 PF13740 ACT domain AMD22_RS09420 PF00701 Dihydrodipicolinate synthetase family AMD22_RS09430 PF00037 4Fe-4S binding domain AMD22_RS09430 PF11953 Domain of unknown function (DUF3470) AMD22_RS09435 PF05035 2-keto-3-deoxy-galactonokinase AMD22_RS09440 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD22_RS09445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD22_RS09445 PF13378 Enolase C-terminal domain-like AMD22_RS09450 PF01081 KDPG and KHG aldolase AMD22_RS09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS09460 PF03466 LysR substrate binding domain AMD22_RS09465 PF00593 TonB dependent receptor AMD22_RS09465 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS09470 PF00593 TonB dependent receptor AMD22_RS09470 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS09480 PF03629 Domain of unknown function (DUF303) AMD22_RS09480 PF13364 Beta-galactosidase jelly roll domain AMD22_RS09485 PF02449 Beta-galactosidase AMD22_RS09490 PF01055 Glycosyl hydrolases family 31 AMD22_RS09490 PF07691 PA14 domain AMD22_RS09490 PF16338 AMD22_RS09490 AMD22_RS09490 PF17137 AMD22_RS09490 AMD22_RS09495 PF14498 Glycosyl hydrolase family 65, N-terminal domain AMD22_RS09500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD22_RS09500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD22_RS09510 PF00083 Sugar (and other) transporter AMD22_RS09515 PF05231 AMD22_RS09515 AMD22_RS09520 PF01520 N-acetylmuramoyl-L-alanine amidase AMD22_RS09520 PF11741 AMIN domain AMD22_RS09525 PF02649 Type I GTP cyclohydrolase folE2 AMD22_RS09535 PF01743 Poly A polymerase head domain AMD22_RS09535 PF12626 Polymerase A arginine-rich C-terminus AMD22_RS09535 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD22_RS09540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD22_RS09545 PF02548 Ketopantoate hydroxymethyltransferase AMD22_RS09550 PF02569 Pantoate-beta-alanine ligase AMD22_RS09555 PF02261 Aspartate decarboxylase AMD22_RS09560 PF00342 Phosphoglucose isomerase AMD22_RS09565 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD22_RS09575 PF05787 Bacterial protein of unknown function (DUF839) AMD22_RS09580 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD22_RS09580 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD22_RS09585 PF00474 Sodium:solute symporter family AMD22_RS09590 PF00563 EAL domain AMD22_RS09590 PF00990 GGDEF domain AMD22_RS09590 PF01590 GAF domain AMD22_RS09595 PF00150 Cellulase (glycosyl hydrolase family 5) AMD22_RS09600 PF00072 Response regulator receiver domain AMD22_RS09600 PF02954 Bacterial regulatory protein, Fis family AMD22_RS09605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS09610 PF04551 GcpE protein AMD22_RS09615 PF01569 PAP2 superfamily AMD22_RS09620 PF07690 Major Facilitator Superfamily AMD22_RS09625 PF01177 Asp/Glu/Hydantoin racemase AMD22_RS09630 PF00892 EamA-like transporter family AMD22_RS09635 PF01565 FAD binding domain AMD22_RS09635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD22_RS09640 PF01180 Dihydroorotate dehydrogenase AMD22_RS09645 PF08241 Methyltransferase domain AMD22_RS09650 PF13828 AMD22_RS09650 AMD22_RS09655 PF00171 Aldehyde dehydrogenase family AMD22_RS09665 PF13994 AMD22_RS09665 AMD22_RS09670 PF13641 Glycosyltransferase like family 2 AMD22_RS09675 PF01522 Polysaccharide deacetylase AMD22_RS09675 PF14883 Hypothetical glycosyl hydrolase family 13 AMD22_RS09680 PF13432 Tetratricopeptide repeat AMD22_RS09680 PF14559 Tetratricopeptide repeat AMD22_RS09685 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD22_RS09685 PF08479 POTRA domain, ShlB-type AMD22_RS09690 PF05594 AMD22_RS09690 AMD22_RS09690 PF05860 haemagglutination activity domain AMD22_RS09690 PF13332 AMD22_RS09690 AMD22_RS09695 PF05594 AMD22_RS09695 AMD22_RS09695 PF13332 AMD22_RS09695 AMD22_RS09700 PF05594 AMD22_RS09700 AMD22_RS09705 PF03073 TspO/MBR family AMD22_RS09710 PF00696 Amino acid kinase family AMD22_RS09710 PF00742 Homoserine dehydrogenase AMD22_RS09710 PF03447 Homoserine dehydrogenase, NAD binding domain AMD22_RS09710 PF13840 ACT domain AMD22_RS09715 PF00288 GHMP kinases N terminal domain AMD22_RS09715 PF08544 GHMP kinases C terminal AMD22_RS09720 PF07110 EthD domain AMD22_RS09725 PF00291 Pyridoxal-phosphate dependent enzyme AMD22_RS09725 PF14821 Threonine synthase N terminus AMD22_RS09730 PF13645 AMD22_RS09730 AMD22_RS09735 PF00027 Cyclic nucleotide-binding domain AMD22_RS09735 PF13545 Crp-like helix-turn-helix domain AMD22_RS09740 PF03129 Anticodon binding domain AMD22_RS09740 PF13393 Histidyl-tRNA synthetase AMD22_RS09745 PF01371 Trp repressor protein AMD22_RS09750 PF01634 ATP phosphoribosyltransferase AMD22_RS09750 PF08029 HisG, C-terminal domain AMD22_RS09755 PF00815 Histidinol dehydrogenase AMD22_RS09760 PF00155 Aminotransferase class I and II AMD22_RS09765 PF00475 Imidazoleglycerol-phosphate dehydratase AMD22_RS09765 PF13242 HAD-hyrolase-like AMD22_RS09770 PF00117 Glutamine amidotransferase class-I AMD22_RS09775 PF00977 Histidine biosynthesis protein AMD22_RS09780 PF00977 Histidine biosynthesis protein AMD22_RS09785 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD22_RS09785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD22_RS09790 PF00149 Calcineurin-like phosphoesterase AMD22_RS09790 PF16370 AMD22_RS09790 AMD22_RS09790 PF16371 AMD22_RS09790 AMD22_RS09795 PF01650 Peptidase C13 family AMD22_RS09805 PF03079 ARD/ARD' family AMD22_RS09810 PF00596 Class II Aldolase and Adducin N-terminal domain AMD22_RS09815 PF13520 Amino acid permease AMD22_RS09820 PF13520 Amino acid permease AMD22_RS09825 PF00293 NUDIX domain AMD22_RS09830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD22_RS09830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD22_RS09835 PF01565 FAD binding domain AMD22_RS09835 PF02913 FAD linked oxidases, C-terminal domain AMD22_RS09840 PF09498 AMD22_RS09840 AMD22_RS09845 PF13387 AMD22_RS09845 AMD22_RS09855 PF01132 Elongation factor P (EF-P) OB domain AMD22_RS09855 PF08207 Elongation factor P (EF-P) KOW-like domain AMD22_RS09855 PF09285 Elongation factor P, C-terminal AMD22_RS09860 PF00106 short chain dehydrogenase AMD22_RS09865 PF00682 HMGL-like AMD22_RS09870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS09875 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS09880 PF04023 FeoA domain AMD22_RS09885 PF02421 Ferrous iron transport protein B AMD22_RS09885 PF07664 AMD22_RS09885 AMD22_RS09885 PF07670 Nucleoside recognition AMD22_RS09900 PF00155 Aminotransferase class I and II AMD22_RS09905 PF03473 MOSC domain AMD22_RS09905 PF03475 3-alpha domain AMD22_RS09910 PF01113 Dihydrodipicolinate reductase, N-terminus AMD22_RS09910 PF05173 Dihydrodipicolinate reductase, C-terminus AMD22_RS09915 PF00117 Glutamine amidotransferase class-I AMD22_RS09915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD22_RS09925 PF02142 MGS-like domain AMD22_RS09925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD22_RS09925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD22_RS09930 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD22_RS09930 PF03449 Transcription elongation factor, N-terminal AMD22_RS09940 PF01368 DHH family AMD22_RS09940 PF02272 DHHA1 domain AMD22_RS09945 PF05593 AMD22_RS09945 AMD22_RS09955 PF15649 AMD22_RS09955 AMD22_RS09970 PF13683 AMD22_RS09970 AMD22_RS09980 PF01757 AMD22_RS09980 AMD22_RS09985 PF04397 LytTr DNA-binding domain AMD22_RS09990 PF00472 RF-1 domain AMD22_RS09990 PF03462 PCRF domain AMD22_RS09995 PF00152 tRNA synthetases class II (D, K and N) AMD22_RS09995 PF01336 OB-fold nucleic acid binding domain AMD22_RS10000 PF00072 Response regulator receiver domain AMD22_RS10000 PF01966 HD domain AMD22_RS10005 PF00072 Response regulator receiver domain AMD22_RS10005 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS10005 PF01627 Hpt domain AMD22_RS10005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS10010 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS10015 PF00501 AMP-binding enzyme AMD22_RS10015 PF13193 AMP-binding enzyme C-terminal domain AMD22_RS10025 PF00330 Aconitase family (aconitate hydratase) AMD22_RS10025 PF00694 Aconitase C-terminal domain AMD22_RS10030 PF04014 Antidote-toxin recognition MazE AMD22_RS10035 PF01850 PIN domain AMD22_RS10040 PF00330 Aconitase family (aconitate hydratase) AMD22_RS10040 PF06434 Aconitate hydratase 2 N-terminus AMD22_RS10040 PF11791 Aconitate B N-terminal domain AMD22_RS10045 PF00561 alpha/beta hydrolase fold AMD22_RS10050 PF00563 EAL domain AMD22_RS10050 PF00990 GGDEF domain AMD22_RS10050 PF13185 GAF domain AMD22_RS10050 PF13426 PAS domain AMD22_RS10055 PF00072 Response regulator receiver domain AMD22_RS10055 PF01339 CheB methylesterase AMD22_RS10060 PF03975 CheD chemotactic sensory transduction AMD22_RS10065 PF01739 CheR methyltransferase, SAM binding domain AMD22_RS10065 PF03705 CheR methyltransferase, all-alpha domain AMD22_RS10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10070 PF00672 HAMP domain AMD22_RS10070 PF12729 AMD22_RS10070 AMD22_RS10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10075 PF00672 HAMP domain AMD22_RS10080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10080 PF00672 HAMP domain AMD22_RS10080 PF12729 AMD22_RS10080 AMD22_RS10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10090 PF00672 HAMP domain AMD22_RS10090 PF05227 CHASE3 domain AMD22_RS10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10095 PF00672 HAMP domain AMD22_RS10095 PF12729 AMD22_RS10095 AMD22_RS10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10100 PF00672 HAMP domain AMD22_RS10100 PF12729 AMD22_RS10100 AMD22_RS10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10110 PF13557 AMD22_RS10110 AMD22_RS10120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10120 PF00672 HAMP domain AMD22_RS10120 PF02743 Cache domain AMD22_RS10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10125 PF00672 HAMP domain AMD22_RS10125 PF17200 AMD22_RS10125 AMD22_RS10135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10135 PF00672 HAMP domain AMD22_RS10135 PF12729 AMD22_RS10135 AMD22_RS10140 PF01584 CheW-like domain AMD22_RS10140 PF01627 Hpt domain AMD22_RS10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS10140 PF02895 Signal transducing histidine kinase, homodimeric domain AMD22_RS10145 PF00072 Response regulator receiver domain AMD22_RS10150 PF13466 STAS domain AMD22_RS10155 PF01584 CheW-like domain AMD22_RS10160 PF13614 AAA domain AMD22_RS10165 PF00691 OmpA family AMD22_RS10165 PF13677 AMD22_RS10165 AMD22_RS10170 PF01618 AMD22_RS10170 AMD22_RS10180 PF00593 TonB dependent receptor AMD22_RS10180 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS10185 PF00069 Protein kinase domain AMD22_RS10200 PF08845 AMD22_RS10200 AMD22_RS10210 PF01609 Transposase DDE domain AMD22_RS10220 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD22_RS10225 PF13333 AMD22_RS10225 AMD22_RS10235 PF01527 Transposase AMD22_RS10240 PF13683 AMD22_RS10240 AMD22_RS10245 PF01381 Helix-turn-helix AMD22_RS10255 PF04055 Radical SAM superfamily AMD22_RS10255 PF13353 4Fe-4S single cluster domain AMD22_RS10265 PF01609 Transposase DDE domain AMD22_RS10270 PF01584 CheW-like domain AMD22_RS10270 PF01627 Hpt domain AMD22_RS10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS10270 PF02895 Signal transducing histidine kinase, homodimeric domain AMD22_RS10275 PF04344 Chemotaxis phosphatase, CheZ AMD22_RS10280 PF00072 Response regulator receiver domain AMD22_RS10285 PF04539 Sigma-70 region 3 AMD22_RS10285 PF04542 Sigma-70 region 2 AMD22_RS10285 PF04545 Sigma-70, region 4 AMD22_RS10290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD22_RS10295 PF00448 SRP54-type protein, GTPase domain AMD22_RS10300 PF00771 FHIPEP family AMD22_RS10305 PF01312 FlhB HrpN YscU SpaS Family AMD22_RS10310 PF00563 EAL domain AMD22_RS10310 PF00990 GGDEF domain AMD22_RS10310 PF03707 AMD22_RS10310 AMD22_RS10315 PF00990 GGDEF domain AMD22_RS10320 PF07495 Y_Y_Y domain AMD22_RS10325 PF00990 GGDEF domain AMD22_RS10325 PF07494 Two component regulator propeller AMD22_RS10325 PF07495 Y_Y_Y domain AMD22_RS10330 PF01311 AMD22_RS10330 AMD22_RS10335 PF01313 AMD22_RS10335 AMD22_RS10340 PF00813 AMD22_RS10340 AMD22_RS10345 PF04347 AMD22_RS10345 AMD22_RS10350 PF01052 Surface presentation of antigens (SPOA) AMD22_RS10355 PF01052 Surface presentation of antigens (SPOA) AMD22_RS10355 PF02154 Flagellar motor switch protein FliM AMD22_RS10360 PF03748 AMD22_RS10360 AMD22_RS10365 PF02120 Flagellar hook-length control protein FliK AMD22_RS10370 PF02050 Flagellar FliJ protein AMD22_RS10375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD22_RS10380 PF02108 AMD22_RS10380 AMD22_RS10385 PF01706 FliG C-terminal domain AMD22_RS10385 PF14841 FliG middle domain AMD22_RS10385 PF14842 FliG N-terminal domain AMD22_RS10390 PF01514 Secretory protein of YscJ/FliF family AMD22_RS10390 PF08345 AMD22_RS10390 AMD22_RS10395 PF02049 AMD22_RS10395 AMD22_RS10400 PF00535 Glycosyl transferase family 2 AMD22_RS10405 PF05050 Methyltransferase FkbM domain AMD22_RS10410 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS10415 PF00355 Rieske [2Fe-2S] domain AMD22_RS10415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMD22_RS10420 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS10420 PF14602 Hexapeptide repeat of succinyl-transferase AMD22_RS10425 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS10430 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS10435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD22_RS10435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD22_RS10445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD22_RS10450 PF00158 Sigma-54 interaction domain AMD22_RS10450 PF02954 Bacterial regulatory protein, Fis family AMD22_RS10450 PF06490 AMD22_RS10450 AMD22_RS10455 PF00072 Response regulator receiver domain AMD22_RS10460 PF00309 AMD22_RS10460 AMD22_RS10460 PF04552 Sigma-54, DNA binding domain AMD22_RS10460 PF04963 Sigma-54 factor, core binding domain AMD22_RS10465 PF00072 Response regulator receiver domain AMD22_RS10465 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS10470 PF16823 AMD22_RS10470 AMD22_RS10480 PF02561 Flagellar protein FliS AMD22_RS10485 PF02465 AMD22_RS10485 AMD22_RS10485 PF07195 AMD22_RS10485 AMD22_RS10485 PF07196 Flagellin hook IN motif AMD22_RS10490 PF00669 Bacterial flagellin N-terminal helical region AMD22_RS10490 PF00700 Bacterial flagellin C-terminal helical region AMD22_RS10490 PF07196 Flagellin hook IN motif AMD22_RS10495 PF00669 Bacterial flagellin N-terminal helical region AMD22_RS10495 PF00700 Bacterial flagellin C-terminal helical region AMD22_RS10500 PF00460 Flagella basal body rod protein AMD22_RS10500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD22_RS10505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD22_RS10505 PF10135 AMD22_RS10505 AMD22_RS10510 PF02119 AMD22_RS10510 AMD22_RS10515 PF02107 AMD22_RS10515 AMD22_RS10520 PF00460 Flagella basal body rod protein AMD22_RS10520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD22_RS10525 PF00460 Flagella basal body rod protein AMD22_RS10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD22_RS10530 PF00460 Flagella basal body rod protein AMD22_RS10530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD22_RS10530 PF07559 Flagellar basal body protein FlaE AMD22_RS10535 PF03963 AMD22_RS10535 AMD22_RS10535 PF13860 FlgD Ig-like domain AMD22_RS10535 PF13861 FlgD Tudor-like domain AMD22_RS10540 PF00460 Flagella basal body rod protein AMD22_RS10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD22_RS10545 PF00460 Flagella basal body rod protein AMD22_RS10550 PF00072 Response regulator receiver domain AMD22_RS10550 PF01584 CheW-like domain AMD22_RS10555 PF13144 SAF-like AMD22_RS10560 PF04316 Anti-sigma-28 factor, FlgM AMD22_RS10570 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS10575 PF00072 Response regulator receiver domain AMD22_RS10575 PF00563 EAL domain AMD22_RS10575 PF00990 GGDEF domain AMD22_RS10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS10580 PF07730 Histidine kinase AMD22_RS10580 PF08448 PAS fold AMD22_RS10580 PF13426 PAS domain AMD22_RS10585 PF00563 EAL domain AMD22_RS10585 PF00990 GGDEF domain AMD22_RS10585 PF08447 PAS fold AMD22_RS10585 PF13426 PAS domain AMD22_RS10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS10600 PF04356 Protein of unknown function (DUF489) AMD22_RS10605 PF03054 tRNA methyl transferase AMD22_RS10610 PF00293 NUDIX domain AMD22_RS10615 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD22_RS10620 PF00004 ATPase family associated with various cellular activities (AAA) AMD22_RS10620 PF02861 Clp amino terminal domain AMD22_RS10620 PF07724 AAA domain (Cdc48 subfamily) AMD22_RS10620 PF10431 C-terminal, D2-small domain, of ClpB protein AMD22_RS10625 PF01176 Translation initiation factor 1A / IF-1 AMD22_RS10630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD22_RS10635 PF04339 AMD22_RS10635 AMD22_RS10640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS10645 PF01580 FtsK/SpoIIIE family AMD22_RS10645 PF09397 Ftsk gamma domain AMD22_RS10645 PF13491 AMD22_RS10645 AMD22_RS10650 PF01841 Transglutaminase-like superfamily AMD22_RS10650 PF12969 Domain of Unknown Function with PDB structure (DUF3857) AMD22_RS10655 PF03548 Outer membrane lipoprotein carrier protein LolA AMD22_RS10665 PF00004 ATPase family associated with various cellular activities (AAA) AMD22_RS10665 PF12002 MgsA AAA+ ATPase C terminal AMD22_RS10665 PF16193 AMD22_RS10665 AMD22_RS10670 PF02537 AMD22_RS10670 AMD22_RS10680 PF00108 Thiolase, N-terminal domain AMD22_RS10680 PF02803 Thiolase, C-terminal domain AMD22_RS10685 PF00378 Enoyl-CoA hydratase/isomerase family AMD22_RS10685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD22_RS10685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD22_RS10690 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS10695 PF00334 Nucleoside diphosphate kinase AMD22_RS10700 PF04055 Radical SAM superfamily AMD22_RS10705 PF13432 Tetratricopeptide repeat AMD22_RS10710 PF13413 Helix-turn-helix domain AMD22_RS10710 PF13464 AMD22_RS10710 AMD22_RS10715 PF09976 Tetratricopeptide repeat AMD22_RS10720 PF13360 PQQ-like domain AMD22_RS10725 PF01926 50S ribosome-binding GTPase AMD22_RS10725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD22_RS10730 PF00994 Probable molybdopterin binding domain AMD22_RS10730 PF03453 MoeA N-terminal region (domain I and II) AMD22_RS10730 PF03454 MoeA C-terminal region (domain IV) AMD22_RS10735 PF00581 Rhodanese-like domain AMD22_RS10735 PF00899 ThiF family AMD22_RS10740 PF00593 TonB dependent receptor AMD22_RS10740 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS10750 PF13628 AMD22_RS10750 AMD22_RS10760 PF00107 Zinc-binding dehydrogenase AMD22_RS10760 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS10760 PF13823 Alcohol dehydrogenase GroES-associated AMD22_RS10765 PF06884 AMD22_RS10765 AMD22_RS10770 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS10775 PF04193 PQ loop repeat AMD22_RS10780 PF00994 Probable molybdopterin binding domain AMD22_RS10780 PF03453 MoeA N-terminal region (domain I and II) AMD22_RS10780 PF03454 MoeA C-terminal region (domain IV) AMD22_RS10785 PF12804 MobA-like NTP transferase domain AMD22_RS10795 PF00561 alpha/beta hydrolase fold AMD22_RS10800 PF01566 AMD22_RS10800 AMD22_RS10805 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD22_RS10805 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD22_RS10810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD22_RS10815 PF00929 Exonuclease AMD22_RS10820 PF00924 Mechanosensitive ion channel AMD22_RS10825 PF00391 PEP-utilising enzyme, mobile domain AMD22_RS10825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD22_RS10825 PF02896 PEP-utilising enzyme, TIM barrel domain AMD22_RS10830 PF03618 AMD22_RS10830 AMD22_RS10835 PF06853 AMD22_RS10835 AMD22_RS10840 PF00293 NUDIX domain AMD22_RS10845 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS10850 PF01066 CDP-alcohol phosphatidyltransferase AMD22_RS10855 PF09712 AMD22_RS10855 AMD22_RS10860 PF00561 alpha/beta hydrolase fold AMD22_RS10865 PF04024 AMD22_RS10865 AMD22_RS10875 PF01266 FAD dependent oxidoreductase AMD22_RS10885 PF00575 S1 RNA binding domain AMD22_RS10885 PF09371 Tex-like protein N-terminal domain AMD22_RS10885 PF12836 Helix-hairpin-helix motif AMD22_RS10885 PF16921 AMD22_RS10885 AMD22_RS10890 PF00072 Response regulator receiver domain AMD22_RS10890 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS10890 PF01590 GAF domain AMD22_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS10890 PF08447 PAS fold AMD22_RS10890 PF08448 PAS fold AMD22_RS10890 PF13185 GAF domain AMD22_RS10930 PF00034 Cytochrome c AMD22_RS10935 PF00034 Cytochrome c AMD22_RS10940 PF00529 HlyD family secretion protein AMD22_RS10940 PF16576 AMD22_RS10940 AMD22_RS10945 PF00873 AcrB/AcrD/AcrF family AMD22_RS10950 PF00873 AcrB/AcrD/AcrF family AMD22_RS10955 PF01081 KDPG and KHG aldolase AMD22_RS10960 PF00920 Dehydratase family AMD22_RS10965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD22_RS10970 PF02685 Glucokinase AMD22_RS10975 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD22_RS10975 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD22_RS10980 PF00005 ABC transporter AMD22_RS10980 PF08402 TOBE domain AMD22_RS10985 PF01571 Aminomethyltransferase folate-binding domain AMD22_RS10985 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD22_RS10990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD22_RS10995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD22_RS11000 PF00890 FAD binding domain AMD22_RS11000 PF02910 Fumarate reductase flavoprotein C-term AMD22_RS11010 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD22_RS11010 PF13534 4Fe-4S dicluster domain AMD22_RS11015 PF03937 Flavinator of succinate dehydrogenase AMD22_RS11025 PF02687 AMD22_RS11025 AMD22_RS11025 PF12704 MacB-like periplasmic core domain AMD22_RS11030 PF00005 ABC transporter AMD22_RS11035 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS11040 PF00753 Metallo-beta-lactamase superfamily AMD22_RS11040 PF03772 AMD22_RS11040 AMD22_RS11040 PF13567 AMD22_RS11040 AMD22_RS11045 PF01618 AMD22_RS11045 AMD22_RS11050 PF02472 Biopolymer transport protein ExbD/TolR AMD22_RS11055 PF00005 ABC transporter AMD22_RS11055 PF00664 ABC transporter transmembrane region AMD22_RS11060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD22_RS11065 PF02348 Cytidylyltransferase AMD22_RS11070 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD22_RS11075 PF01436 NHL repeat AMD22_RS11080 PF01541 GIY-YIG catalytic domain AMD22_RS11080 PF02151 UvrB/uvrC motif AMD22_RS11080 PF08459 UvrC Helix-hairpin-helix N-terminal AMD22_RS11085 PF01066 CDP-alcohol phosphatidyltransferase AMD22_RS11105 PF00501 AMP-binding enzyme AMD22_RS11105 PF00550 Phosphopantetheine attachment site AMD22_RS11105 PF00668 Condensation domain AMD22_RS11105 PF13193 AMP-binding enzyme C-terminal domain AMD22_RS11110 PF00501 AMP-binding enzyme AMD22_RS11110 PF00550 Phosphopantetheine attachment site AMD22_RS11110 PF00668 Condensation domain AMD22_RS11110 PF00975 Thioesterase domain AMD22_RS11110 PF13193 AMP-binding enzyme C-terminal domain AMD22_RS11115 PF00665 Integrase core domain AMD22_RS11120 PF01527 Transposase AMD22_RS11125 PF00665 Integrase core domain AMD22_RS11125 PF13276 AMD22_RS11125 AMD22_RS11130 PF01527 Transposase AMD22_RS11140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD22_RS11140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD22_RS11140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD22_RS11145 PF03486 HI0933-like protein AMD22_RS11150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD22_RS11160 PF00581 Rhodanese-like domain AMD22_RS11165 PF00072 Response regulator receiver domain AMD22_RS11165 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS11170 PF00575 S1 RNA binding domain AMD22_RS11170 PF10150 Ribonuclease E/G family AMD22_RS11175 PF00849 RNA pseudouridylate synthase AMD22_RS11175 PF01479 S4 domain AMD22_RS11180 PF11737 AMD22_RS11180 AMD22_RS11185 PF02535 AMD22_RS11185 AMD22_RS11190 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS11195 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD22_RS11200 PF01106 NifU-like domain AMD22_RS11200 PF01521 Iron-sulphur cluster biosynthesis AMD22_RS11215 PF04940 Sensors of blue-light using FAD AMD22_RS11220 PF01596 O-methyltransferase AMD22_RS11225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS11230 PF02585 GlcNAc-PI de-N-acetylase AMD22_RS11235 PF05401 Nodulation protein S (NodS) AMD22_RS11240 PF00535 Glycosyl transferase family 2 AMD22_RS11245 PF12697 Alpha/beta hydrolase family AMD22_RS11245 PF13618 AMD22_RS11245 AMD22_RS11250 PF00732 GMC oxidoreductase AMD22_RS11250 PF05199 GMC oxidoreductase AMD22_RS11255 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS11260 PF12375 AMD22_RS11260 AMD22_RS11270 PF13333 AMD22_RS11270 AMD22_RS11280 PF01527 Transposase AMD22_RS11290 PF09335 AMD22_RS11290 AMD22_RS11310 PF07995 Glucose / Sorbosone dehydrogenase AMD22_RS11320 PF00144 Beta-lactamase AMD22_RS11325 PF00072 Response regulator receiver domain AMD22_RS11325 PF04397 LytTr DNA-binding domain AMD22_RS11330 PF06580 AMD22_RS11330 AMD22_RS11345 PF00082 Subtilase family AMD22_RS11345 PF03797 Autotransporter beta-domain AMD22_RS11345 PF12951 AMD22_RS11345 AMD22_RS11350 PF16576 AMD22_RS11350 AMD22_RS11355 PF00873 AcrB/AcrD/AcrF family AMD22_RS11360 PF02321 Outer membrane efflux protein AMD22_RS11365 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS11370 PF00072 Response regulator receiver domain AMD22_RS11370 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS11375 PF12951 AMD22_RS11375 AMD22_RS11375 PF13018 AMD22_RS11375 AMD22_RS11380 PF00563 EAL domain AMD22_RS11385 PF07081 Protein of unknown function (DUF1349) AMD22_RS11390 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMD22_RS11395 PF05974 Domain of unknown function (DUF892) AMD22_RS11400 PF10685 AMD22_RS11400 AMD22_RS11405 PF00072 Response regulator receiver domain AMD22_RS11410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD22_RS11410 PF10414 Sirohaem synthase dimerisation region AMD22_RS11410 PF13241 Putative NAD(P)-binding AMD22_RS11410 PF14824 Sirohaem biosynthesis protein central AMD22_RS11425 PF05977 Transmembrane secretion effector AMD22_RS11435 PF07969 Amidohydrolase family AMD22_RS11440 PF07681 AMD22_RS11440 AMD22_RS11445 PF00857 Isochorismatase family AMD22_RS11450 PF12833 Helix-turn-helix domain AMD22_RS11455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS11455 PF07495 Y_Y_Y domain AMD22_RS11455 PF07730 Histidine kinase AMD22_RS11460 PF00072 Response regulator receiver domain AMD22_RS11460 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS11465 PF00672 HAMP domain AMD22_RS11465 PF17201 AMD22_RS11465 AMD22_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS11480 PF03466 LysR substrate binding domain AMD22_RS11485 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD22_RS11485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD22_RS11490 PF10070 AMD22_RS11490 AMD22_RS11500 PF01527 Transposase AMD22_RS11505 PF13560 Helix-turn-helix domain AMD22_RS11510 PF05284 AMD22_RS11510 AMD22_RS11515 PF04002 RadC-like JAB domain AMD22_RS11520 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD22_RS11530 PF08843 Nucleotidyl transferase of unknown function (DUF1814) AMD22_RS11535 PF11459 AMD22_RS11535 AMD22_RS11535 PF17194 AMD22_RS11535 AMD22_RS11540 PF00589 Phage integrase family AMD22_RS11540 PF13356 Domain of unknown function (DUF4102) AMD22_RS11540 PF14659 Phage integrase, N-terminal SAM-like domain AMD22_RS11555 PF00593 TonB dependent receptor AMD22_RS11555 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS11560 PF07916 AMD22_RS11560 AMD22_RS11565 PF01850 PIN domain AMD22_RS11570 PF04014 Antidote-toxin recognition MazE AMD22_RS11575 PF16263 AMD22_RS11575 AMD22_RS11585 PF04542 Sigma-70 region 2 AMD22_RS11585 PF08281 Sigma-70, region 4 AMD22_RS11590 PF04773 FecR protein AMD22_RS11590 PF16220 AMD22_RS11590 AMD22_RS11595 PF00593 TonB dependent receptor AMD22_RS11595 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS11605 PF10947 AMD22_RS11605 AMD22_RS11610 PF07514 Putative helicase AMD22_RS11610 PF07515 Protein of unknown function (DUF1528) AMD22_RS11615 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD22_RS11615 PF05345 Putative Ig domain AMD22_RS11615 PF06594 AMD22_RS11615 AMD22_RS11620 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD22_RS11620 PF06594 AMD22_RS11620 AMD22_RS11625 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD22_RS11635 PF13437 HlyD family secretion protein AMD22_RS11635 PF13533 Biotin-lipoyl like AMD22_RS11640 PF00005 ABC transporter AMD22_RS11640 PF00664 ABC transporter transmembrane region AMD22_RS11645 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD22_RS11650 PF13614 AAA domain AMD22_RS11665 PF11198 AMD22_RS11665 AMD22_RS11675 PF08900 AMD22_RS11675 AMD22_RS11685 PF00436 Single-strand binding protein family AMD22_RS11695 PF00145 C-5 cytosine-specific DNA methylase AMD22_RS11705 PF13304 AAA domain AMD22_RS11735 PF11284 AMD22_RS11735 AMD22_RS11740 PF00589 Phage integrase family AMD22_RS11740 PF13356 Domain of unknown function (DUF4102) AMD22_RS11740 PF14659 Phage integrase, N-terminal SAM-like domain AMD22_RS11745 PF06250 AMD22_RS11745 AMD22_RS11750 PF01527 Transposase AMD22_RS11760 PF13333 AMD22_RS11760 AMD22_RS11765 PF00892 EamA-like transporter family AMD22_RS11770 PF00892 EamA-like transporter family AMD22_RS11775 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS11780 PF02525 Flavodoxin-like fold AMD22_RS11785 PF00043 Glutathione S-transferase, C-terminal domain AMD22_RS11785 PF13417 Glutathione S-transferase, N-terminal domain AMD22_RS11790 PF05544 Proline racemase AMD22_RS11795 PF03358 NADPH-dependent FMN reductase AMD22_RS11795 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AMD22_RS11800 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS11805 PF07690 Major Facilitator Superfamily AMD22_RS11810 PF12833 Helix-turn-helix domain AMD22_RS11815 PF12101 AMD22_RS11815 AMD22_RS11820 PF11679 AMD22_RS11820 AMD22_RS11850 PF00271 Helicase conserved C-terminal domain AMD22_RS11865 PF07791 AMD22_RS11865 AMD22_RS11920 PF01464 Transglycosylase SLT domain AMD22_RS11925 PF11072 AMD22_RS11925 AMD22_RS11930 PF12696 TraM recognition site of TraD and TraG AMD22_RS11935 PF14348 AMD22_RS11935 AMD22_RS11940 PF12532 AMD22_RS11940 AMD22_RS11940 PF13476 AAA domain AMD22_RS11960 PF00580 UvrD/REP helicase N-terminal domain AMD22_RS11960 PF13361 UvrD-like helicase C-terminal domain AMD22_RS11985 PF09686 AMD22_RS11985 AMD22_RS11990 PF11660 AMD22_RS11990 AMD22_RS11995 PF11190 AMD22_RS11995 AMD22_RS12000 PF11990 AMD22_RS12000 AMD22_RS12005 PF11444 AMD22_RS12005 AMD22_RS12010 PF11920 AMD22_RS12010 AMD22_RS12025 PF11130 AMD22_RS12025 AMD22_RS12030 PF13462 Thioredoxin AMD22_RS12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS12035 PF03466 LysR substrate binding domain AMD22_RS12040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD22_RS12040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD22_RS12045 PF03401 Tripartite tricarboxylate transporter family receptor AMD22_RS12050 PF06684 Amino acid synthesis AMD22_RS12060 PF04002 RadC-like JAB domain AMD22_RS12065 PF07511 AMD22_RS12065 AMD22_RS12070 PF06834 AMD22_RS12070 AMD22_RS12080 PF01507 Phosphoadenosine phosphosulfate reductase family AMD22_RS12090 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD22_RS12095 PF00589 Phage integrase family AMD22_RS12095 PF13356 Domain of unknown function (DUF4102) AMD22_RS12095 PF14659 Phage integrase, N-terminal SAM-like domain AMD22_RS12100 PF00117 Glutamine amidotransferase class-I AMD22_RS12100 PF00958 GMP synthase C terminal domain AMD22_RS12100 PF02540 NAD synthase AMD22_RS12105 PF00478 IMP dehydrogenase / GMP reductase domain AMD22_RS12105 PF00571 CBS domain AMD22_RS12110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD22_RS12110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD22_RS12115 PF06844 Protein of unknown function (DUF1244) AMD22_RS12120 PF00999 Sodium/hydrogen exchanger family AMD22_RS12120 PF02254 TrkA-N domain AMD22_RS12125 PF00483 Nucleotidyl transferase AMD22_RS12130 PF02719 Polysaccharide biosynthesis protein AMD22_RS12130 PF13727 CoA-binding domain AMD22_RS12135 PF00953 Glycosyl transferase family 4 AMD22_RS12140 PF13432 Tetratricopeptide repeat AMD22_RS12145 PF06305 AMD22_RS12145 AMD22_RS12150 PF00216 Bacterial DNA-binding protein AMD22_RS12155 PF00575 S1 RNA binding domain AMD22_RS12160 PF02224 Cytidylate kinase AMD22_RS12165 PF00444 Ribosomal protein L36 AMD22_RS12175 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD22_RS12180 PF00795 Carbon-nitrogen hydrolase AMD22_RS12185 PF13420 Acetyltransferase (GNAT) domain AMD22_RS12190 PF01963 AMD22_RS12190 AMD22_RS12195 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS12200 PF00754 F5/8 type C domain AMD22_RS12200 PF06202 Amylo-alpha-1,6-glucosidase AMD22_RS12205 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS12210 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS12215 PF13416 Bacterial extracellular solute-binding protein AMD22_RS12220 PF10091 Putative glucoamylase AMD22_RS12225 PF13620 Carboxypeptidase regulatory-like domain AMD22_RS12230 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS12230 PF13377 Periplasmic binding protein-like domain AMD22_RS12235 PF01722 BolA-like protein AMD22_RS12240 PF03795 YCII-related domain AMD22_RS12245 PF02616 ScpA/B protein AMD22_RS12250 PF04079 Putative transcriptional regulators (Ypuh-like) AMD22_RS12255 PF00849 RNA pseudouridylate synthase AMD22_RS12255 PF01479 S4 domain AMD22_RS12265 PF05096 Glutamine cyclotransferase AMD22_RS12270 PF00795 Carbon-nitrogen hydrolase AMD22_RS12275 PF00155 Aminotransferase class I and II AMD22_RS12280 PF00005 ABC transporter AMD22_RS12285 PF03379 AMD22_RS12285 AMD22_RS12290 PF01578 AMD22_RS12290 AMD22_RS12295 PF04995 AMD22_RS12295 AMD22_RS12300 PF03100 CcmE AMD22_RS12305 PF01578 AMD22_RS12305 AMD22_RS12305 PF16327 AMD22_RS12305 AMD22_RS12310 PF08534 Redoxin AMD22_RS12315 PF03918 Cytochrome C biogenesis protein AMD22_RS12320 PF13432 Tetratricopeptide repeat AMD22_RS12325 PF00561 alpha/beta hydrolase fold AMD22_RS12330 PF00313 'Cold-shock' DNA-binding domain AMD22_RS12330 PF06961 AMD22_RS12330 AMD22_RS12335 PF00005 ABC transporter AMD22_RS12335 PF00664 ABC transporter transmembrane region AMD22_RS12340 PF00005 ABC transporter AMD22_RS12340 PF00664 ABC transporter transmembrane region AMD22_RS12345 PF01654 AMD22_RS12345 AMD22_RS12350 PF02322 AMD22_RS12350 AMD22_RS12355 PF08173 AMD22_RS12355 AMD22_RS12365 PF07690 Major Facilitator Superfamily AMD22_RS12370 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD22_RS12370 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD22_RS12375 PF00171 Aldehyde dehydrogenase family AMD22_RS12380 PF00696 Amino acid kinase family AMD22_RS12380 PF01472 PUA domain AMD22_RS12385 PF03795 YCII-related domain AMD22_RS12390 PF00206 Lyase AMD22_RS12395 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD22_RS12400 PF13302 Acetyltransferase (GNAT) domain AMD22_RS12405 PF00696 Amino acid kinase family AMD22_RS12405 PF04768 Protein of unknown function (DUF619) AMD22_RS12410 PF01546 Peptidase family M20/M25/M40 AMD22_RS12410 PF07687 Peptidase dimerisation domain AMD22_RS12415 PF00583 Acetyltransferase (GNAT) family AMD22_RS12420 PF00764 Arginosuccinate synthase AMD22_RS12425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD22_RS12425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD22_RS12435 PF01406 tRNA synthetases class I (C) catalytic domain AMD22_RS12435 PF09190 DALR domain AMD22_RS12440 PF02657 Fe-S metabolism associated domain AMD22_RS12445 PF05977 Transmembrane secretion effector AMD22_RS12450 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD22_RS12460 PF01809 AMD22_RS12460 AMD22_RS12465 PF01979 Amidohydrolase family AMD22_RS12470 PF01551 Peptidase family M23 AMD22_RS12475 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS12480 PF13520 Amino acid permease AMD22_RS12485 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD22_RS12490 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD22_RS12500 PF00753 Metallo-beta-lactamase superfamily AMD22_RS12505 PF16242 AMD22_RS12505 AMD22_RS12520 PF01527 Transposase AMD22_RS12525 PF00295 Glycosyl hydrolases family 28 AMD22_RS12535 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS12540 PF13489 Methyltransferase domain AMD22_RS12545 PF01979 Amidohydrolase family AMD22_RS12555 PF01132 Elongation factor P (EF-P) OB domain AMD22_RS12555 PF08207 Elongation factor P (EF-P) KOW-like domain AMD22_RS12555 PF09285 Elongation factor P, C-terminal AMD22_RS12560 PF13353 4Fe-4S single cluster domain AMD22_RS12565 PF00563 EAL domain AMD22_RS12565 PF00672 HAMP domain AMD22_RS12565 PF00990 GGDEF domain AMD22_RS12565 PF17203 AMD22_RS12565 AMD22_RS12570 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein AMD22_RS12575 PF00588 SpoU rRNA Methylase family AMD22_RS12580 PF00459 Inositol monophosphatase family AMD22_RS12585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD22_RS12585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD22_RS12590 PF00545 ribonuclease AMD22_RS12595 PF01337 Barstar (barnase inhibitor) AMD22_RS12600 PF00005 ABC transporter AMD22_RS12600 PF12848 ABC transporter AMD22_RS12600 PF16326 AMD22_RS12600 AMD22_RS12605 PF00270 DEAD/DEAH box helicase AMD22_RS12605 PF00271 Helicase conserved C-terminal domain AMD22_RS12605 PF03880 DbpA RNA binding domain AMD22_RS12610 PF00156 Phosphoribosyl transferase domain AMD22_RS12615 PF02696 AMD22_RS12615 AMD22_RS12620 PF07859 alpha/beta hydrolase fold AMD22_RS12625 PF00043 Glutathione S-transferase, C-terminal domain AMD22_RS12625 PF02798 Glutathione S-transferase, N-terminal domain AMD22_RS12630 PF00313 'Cold-shock' DNA-binding domain AMD22_RS12635 PF07152 YaeQ protein AMD22_RS12640 PF03486 HI0933-like protein AMD22_RS12645 PF00563 EAL domain AMD22_RS12645 PF00990 GGDEF domain AMD22_RS12645 PF13188 PAS domain AMD22_RS12650 PF01435 Peptidase family M48 AMD22_RS12655 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD22_RS12660 PF00106 short chain dehydrogenase AMD22_RS12665 PF05233 AMD22_RS12665 AMD22_RS12665 PF07879 AMD22_RS12665 AMD22_RS12670 PF01963 AMD22_RS12670 AMD22_RS12675 PF07920 Protein of unknown function (DUF1684) AMD22_RS12680 PF01119 DNA mismatch repair protein, C-terminal domain AMD22_RS12680 PF08676 MutL C terminal dimerisation domain AMD22_RS12680 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS12685 PF01520 N-acetylmuramoyl-L-alanine amidase AMD22_RS12685 PF11741 AMIN domain AMD22_RS12690 PF02367 Uncharacterised P-loop hydrolase UPF0079 AMD22_RS12695 PF01256 Carbohydrate kinase AMD22_RS12695 PF03853 YjeF-related protein N-terminus AMD22_RS12700 PF08331 AMD22_RS12700 AMD22_RS12700 PF13484 AMD22_RS12700 AMD22_RS12705 PF02601 AMD22_RS12705 AMD22_RS12705 PF13742 AMD22_RS12705 AMD22_RS12710 PF06057 Bacterial virulence protein (VirJ) AMD22_RS12715 PF03781 Sulfatase-modifying factor enzyme 1 AMD22_RS12720 PF00570 HRDC domain AMD22_RS12720 PF01612 3'-5' exonuclease AMD22_RS12725 PF01068 ATP dependent DNA ligase domain AMD22_RS12725 PF04679 ATP dependent DNA ligase C terminal region AMD22_RS12725 PF13298 DNA polymerase Ligase (LigD) AMD22_RS12730 PF12244 AMD22_RS12730 AMD22_RS12735 PF00816 H-NS histone family AMD22_RS12745 PF00589 Phage integrase family AMD22_RS12770 PF01609 Transposase DDE domain AMD22_RS12770 PF05598 AMD22_RS12770 AMD22_RS12775 PF00665 Integrase core domain AMD22_RS12780 PF01527 Transposase AMD22_RS12795 PF05016 Plasmid stabilisation system protein AMD22_RS12800 PF01402 Ribbon-helix-helix protein, copG family AMD22_RS12805 PF01526 AMD22_RS12805 AMD22_RS12815 PF00665 Integrase core domain AMD22_RS12815 PF13276 AMD22_RS12815 AMD22_RS12820 PF00239 Resolvase, N terminal domain AMD22_RS12825 PF13166 AMD22_RS12825 AMD22_RS12835 PF02384 N-6 DNA Methylase AMD22_RS12840 PF09572 AMD22_RS12840 AMD22_RS12850 PF07929 Plasmid pRiA4b ORF-3-like protein AMD22_RS12865 PF04796 AMD22_RS12865 AMD22_RS12875 PF13289 AMD22_RS12875 AMD22_RS12880 PF01935 Domain of unknown function DUF87 AMD22_RS12890 PF00990 GGDEF domain AMD22_RS12895 PF01584 CheW-like domain AMD22_RS12900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS12900 PF00672 HAMP domain AMD22_RS12900 PF12729 AMD22_RS12900 AMD22_RS12905 PF02245 Methylpurine-DNA glycosylase (MPG) AMD22_RS12910 PF00270 DEAD/DEAH box helicase AMD22_RS12910 PF00271 Helicase conserved C-terminal domain AMD22_RS12910 PF08494 AMD22_RS12910 AMD22_RS12915 PF11743 AMD22_RS12915 AMD22_RS12925 PF04386 Stringent starvation protein B AMD22_RS12930 PF00043 Glutathione S-transferase, C-terminal domain AMD22_RS12930 PF13417 Glutathione S-transferase, N-terminal domain AMD22_RS12935 PF02167 Cytochrome C1 family AMD22_RS12940 PF00032 Cytochrome b(C-terminal)/b6/petD AMD22_RS12940 PF00033 Cytochrome b(N-terminal)/b6/petB AMD22_RS12945 PF00355 Rieske [2Fe-2S] domain AMD22_RS12945 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD22_RS12950 PF01464 Transglycosylase SLT domain AMD22_RS12955 PF08279 HTH domain AMD22_RS12955 PF13280 AMD22_RS12955 AMD22_RS12960 PF02798 Glutathione S-transferase, N-terminal domain AMD22_RS12965 PF00919 Uncharacterized protein family UPF0004 AMD22_RS12965 PF01938 TRAM domain AMD22_RS12965 PF04055 Radical SAM superfamily AMD22_RS12970 PF02562 PhoH-like protein AMD22_RS12980 PF02130 Uncharacterized protein family UPF0054 AMD22_RS12990 PF00571 CBS domain AMD22_RS12990 PF03471 Transporter associated domain AMD22_RS12995 PF13387 AMD22_RS12995 AMD22_RS13000 PF01544 CorA-like Mg2+ transporter protein AMD22_RS13005 PF00171 Aldehyde dehydrogenase family AMD22_RS13015 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS13020 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS13025 PF00005 ABC transporter AMD22_RS13025 PF08402 TOBE domain AMD22_RS13030 PF02321 Outer membrane efflux protein AMD22_RS13035 PF07690 Major Facilitator Superfamily AMD22_RS13040 PF13533 Biotin-lipoyl like AMD22_RS13040 PF16576 AMD22_RS13040 AMD22_RS13045 PF13416 Bacterial extracellular solute-binding protein AMD22_RS13050 PF00202 Aminotransferase class-III AMD22_RS13055 PF00120 Glutamine synthetase, catalytic domain AMD22_RS13060 PF07722 Peptidase C26 AMD22_RS13065 PF00120 Glutamine synthetase, catalytic domain AMD22_RS13070 PF01266 FAD dependent oxidoreductase AMD22_RS13075 PF00072 Response regulator receiver domain AMD22_RS13075 PF00990 GGDEF domain AMD22_RS13080 PF01814 Hemerythrin HHE cation binding domain AMD22_RS13085 PF00083 Sugar (and other) transporter AMD22_RS13085 PF07690 Major Facilitator Superfamily AMD22_RS13095 PF00384 Molybdopterin oxidoreductase AMD22_RS13095 PF01568 Molydopterin dinucleotide binding domain AMD22_RS13100 PF02634 FdhD/NarQ family AMD22_RS13105 PF07690 Major Facilitator Superfamily AMD22_RS13110 PF00202 Aminotransferase class-III AMD22_RS13120 PF04286 AMD22_RS13120 AMD22_RS13125 PF00072 Response regulator receiver domain AMD22_RS13125 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS13125 PF01627 Hpt domain AMD22_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS13125 PF03924 CHASE domain AMD22_RS13125 PF13426 PAS domain AMD22_RS13130 PF00072 Response regulator receiver domain AMD22_RS13130 PF13487 HD domain AMD22_RS13135 PF07690 Major Facilitator Superfamily AMD22_RS13140 PF05088 AMD22_RS13140 AMD22_RS13140 PF12466 AMD22_RS13140 AMD22_RS13145 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS13150 PF16576 AMD22_RS13150 AMD22_RS13155 PF00873 AcrB/AcrD/AcrF family AMD22_RS13160 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS13160 PF13377 Periplasmic binding protein-like domain AMD22_RS13165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD22_RS13165 PF00381 PTS HPr component phosphorylation site AMD22_RS13165 PF00391 PEP-utilising enzyme, mobile domain AMD22_RS13165 PF02896 PEP-utilising enzyme, TIM barrel domain AMD22_RS13165 PF05524 PEP-utilising enzyme, N-terminal AMD22_RS13170 PF00294 pfkB family carbohydrate kinase AMD22_RS13175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD22_RS13180 PF04966 Carbohydrate-selective porin, OprB family AMD22_RS13195 PF07791 AMD22_RS13195 AMD22_RS13210 PF02355 Protein export membrane protein AMD22_RS13210 PF07549 SecD/SecF GG Motif AMD22_RS13215 PF02355 Protein export membrane protein AMD22_RS13215 PF07549 SecD/SecF GG Motif AMD22_RS13215 PF13721 SecD export protein N-terminal TM region AMD22_RS13220 PF02699 Preprotein translocase subunit AMD22_RS13225 PF01702 Queuine tRNA-ribosyltransferase AMD22_RS13230 PF02547 Queuosine biosynthesis protein AMD22_RS13235 PF01037 AsnC family AMD22_RS13235 PF13412 Winged helix-turn-helix DNA-binding AMD22_RS13245 PF00202 Aminotransferase class-III AMD22_RS13250 PF04488 Glycosyltransferase sugar-binding region containing DXD motif AMD22_RS13255 PF00149 Calcineurin-like phosphoesterase AMD22_RS13255 PF16656 AMD22_RS13255 AMD22_RS13260 PF02333 Phytase AMD22_RS13265 PF00593 TonB dependent receptor AMD22_RS13265 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS13270 PF14681 Uracil phosphoribosyltransferase AMD22_RS13275 PF00759 Glycosyl hydrolase family 9 AMD22_RS13275 PF02927 N-terminal ig-like domain of cellulase AMD22_RS13285 PF01019 Gamma-glutamyltranspeptidase AMD22_RS13290 PF00037 4Fe-4S binding domain AMD22_RS13305 PF01467 Cytidylyltransferase AMD22_RS13310 PF03602 Conserved hypothetical protein 95 AMD22_RS13315 PF00183 Hsp90 protein AMD22_RS13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS13320 PF05593 AMD22_RS13320 AMD22_RS13320 PF14220 AMD22_RS13320 AMD22_RS13325 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMD22_RS13330 PF00593 TonB dependent receptor AMD22_RS13330 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS13335 PF00326 Prolyl oligopeptidase family AMD22_RS13335 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD22_RS13340 PF04616 Glycosyl hydrolases family 43 AMD22_RS13345 PF00754 F5/8 type C domain AMD22_RS13345 PF07532 AMD22_RS13345 AMD22_RS13350 PF00593 TonB dependent receptor AMD22_RS13350 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS13360 PF00082 Subtilase family AMD22_RS13360 PF09286 Pro-kumamolisin, activation domain AMD22_RS13375 PF01301 Glycosyl hydrolases family 35 AMD22_RS13380 PF00326 Prolyl oligopeptidase family AMD22_RS13380 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD22_RS13385 PF13520 Amino acid permease AMD22_RS13390 PF05960 Bacterial protein of unknown function (DUF885) AMD22_RS13395 PF05960 Bacterial protein of unknown function (DUF885) AMD22_RS13400 PF00557 Metallopeptidase family M24 AMD22_RS13400 PF01321 Creatinase/Prolidase N-terminal domain AMD22_RS13405 PF00171 Aldehyde dehydrogenase family AMD22_RS13410 PF00701 Dihydrodipicolinate synthetase family AMD22_RS13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS13420 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD22_RS13425 PF01266 FAD dependent oxidoreductase AMD22_RS13430 PF05544 Proline racemase AMD22_RS13435 PF08448 PAS fold AMD22_RS13435 PF12833 Helix-turn-helix domain AMD22_RS13440 PF00448 SRP54-type protein, GTPase domain AMD22_RS13440 PF02881 SRP54-type protein, helical bundle domain AMD22_RS13445 PF00633 Helix-hairpin-helix motif AMD22_RS13445 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD22_RS13445 PF14815 NUDIX domain AMD22_RS13450 PF04362 Bacterial Fe(2+) trafficking AMD22_RS13455 PF00072 Response regulator receiver domain AMD22_RS13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS13455 PF13426 PAS domain AMD22_RS13465 PF10685 AMD22_RS13465 AMD22_RS13485 PF08212 Lipocalin-like domain AMD22_RS13490 PF03168 Late embryogenesis abundant protein AMD22_RS13495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS13495 PF02770 Acyl-CoA dehydrogenase, middle domain AMD22_RS13495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD22_RS13495 PF12418 AMD22_RS13495 AMD22_RS13495 PF12806 AMD22_RS13495 AMD22_RS13500 PF14279 AMD22_RS13500 AMD22_RS13505 PF02779 Transketolase, pyrimidine binding domain AMD22_RS13505 PF02780 Transketolase, C-terminal domain AMD22_RS13505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD22_RS13510 PF04101 Glycosyltransferase family 28 C-terminal domain AMD22_RS13520 PF13506 Glycosyl transferase family 21 AMD22_RS13525 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS13530 PF00753 Metallo-beta-lactamase superfamily AMD22_RS13535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD22_RS13535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD22_RS13540 PF01963 AMD22_RS13540 AMD22_RS13545 PF06172 Cupin superfamily (DUF985) AMD22_RS13550 PF03808 AMD22_RS13550 AMD22_RS13555 PF04230 AMD22_RS13555 AMD22_RS13565 PF13440 AMD22_RS13565 AMD22_RS13570 PF13692 Glycosyl transferases group 1 AMD22_RS13575 PF00534 Glycosyl transferases group 1 AMD22_RS13575 PF13439 Glycosyltransferase Family 4 AMD22_RS13580 PF01757 AMD22_RS13580 AMD22_RS13585 PF01757 AMD22_RS13585 AMD22_RS13595 PF02397 AMD22_RS13595 AMD22_RS13595 PF13727 CoA-binding domain AMD22_RS13600 PF02706 Chain length determinant protein AMD22_RS13600 PF13807 AMD22_RS13600 AMD22_RS13605 PF02563 Polysaccharide biosynthesis/export protein AMD22_RS13605 PF10531 SLBB domain AMD22_RS13615 PF13411 MerR HTH family regulatory protein AMD22_RS13620 PF00216 Bacterial DNA-binding protein AMD22_RS13625 PF01588 Putative tRNA binding domain AMD22_RS13625 PF03147 Ferredoxin-fold anticodon binding domain AMD22_RS13625 PF03483 B3/4 domain AMD22_RS13625 PF03484 tRNA synthetase B5 domain AMD22_RS13630 PF01409 tRNA synthetases class II core domain (F) AMD22_RS13630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD22_RS13635 PF00453 Ribosomal protein L20 AMD22_RS13640 PF01632 Ribosomal protein L35 AMD22_RS13645 PF00707 Translation initiation factor IF-3, C-terminal domain AMD22_RS13645 PF05198 Translation initiation factor IF-3, N-terminal domain AMD22_RS13650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD22_RS13650 PF02824 TGS domain AMD22_RS13650 PF03129 Anticodon binding domain AMD22_RS13650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD22_RS13655 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS13655 PF13377 Periplasmic binding protein-like domain AMD22_RS13660 PF00128 Alpha amylase, catalytic domain AMD22_RS13665 PF07690 Major Facilitator Superfamily AMD22_RS13670 PF06202 Amylo-alpha-1,6-glucosidase AMD22_RS13675 PF10566 Glycoside hydrolase 97 AMD22_RS13675 PF14508 Glycosyl-hydrolase 97 N-terminal AMD22_RS13675 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD22_RS13685 PF00593 TonB dependent receptor AMD22_RS13685 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS13690 PF00128 Alpha amylase, catalytic domain AMD22_RS13695 PF01527 Transposase AMD22_RS13700 PF13683 AMD22_RS13700 AMD22_RS13715 PF01471 Putative peptidoglycan binding domain AMD22_RS13725 PF04610 AMD22_RS13725 AMD22_RS13735 PF03135 AMD22_RS13735 AMD22_RS13740 PF05101 AMD22_RS13740 AMD22_RS13745 PF04956 AMD22_RS13745 AMD22_RS13750 PF01464 Transglycosylase SLT domain AMD22_RS13755 PF00437 Type II/IV secretion system protein AMD22_RS13760 PF03743 Bacterial conjugation TrbI-like protein AMD22_RS13765 PF03524 Conjugal transfer protein AMD22_RS13770 PF04335 VirB8 protein AMD22_RS13775 PF10671 Toxin co-regulated pilus biosynthesis protein Q AMD22_RS13780 PF02534 Type IV secretory system Conjugative DNA transfer AMD22_RS13795 PF00271 Helicase conserved C-terminal domain AMD22_RS13795 PF02151 UvrB/uvrC motif AMD22_RS13795 PF04851 Type III restriction enzyme, res subunit AMD22_RS13795 PF12344 Ultra-violet resistance protein B AMD22_RS13830 PF01527 Transposase AMD22_RS13840 PF13333 AMD22_RS13840 AMD22_RS13860 PF01555 DNA methylase AMD22_RS13865 PF04860 Phage portal protein AMD22_RS13870 PF03237 Terminase-like family AMD22_RS13870 PF06056 Putative ATPase subunit of terminase (gpP-like) AMD22_RS13875 PF05929 AMD22_RS13875 AMD22_RS13880 PF05125 AMD22_RS13880 AMD22_RS13885 PF05944 AMD22_RS13885 AMD22_RS13890 PF05926 AMD22_RS13890 AMD22_RS13895 PF05489 Phage Tail Protein X AMD22_RS13900 PF16931 AMD22_RS13900 AMD22_RS13905 PF05449 AMD22_RS13905 AMD22_RS13920 PF06891 AMD22_RS13920 AMD22_RS13925 PF05069 AMD22_RS13925 AMD22_RS13930 PF04865 AMD22_RS13930 AMD22_RS13935 PF09684 AMD22_RS13935 AMD22_RS13955 PF04717 Phage-related baseplate assembly protein AMD22_RS13965 PF01527 Transposase AMD22_RS13975 PF13633 Prokaryotic N-terminal methylation site AMD22_RS13975 PF16732 AMD22_RS13975 AMD22_RS13980 PF05567 Neisseria PilC beta-propeller domain AMD22_RS13985 PF13681 AMD22_RS13985 AMD22_RS13985 PF14341 AMD22_RS13985 AMD22_RS13990 PF13544 AMD22_RS13990 AMD22_RS13990 PF16074 AMD22_RS13990 AMD22_RS13995 PF13544 AMD22_RS13995 AMD22_RS14000 PF12019 Type II transport protein GspH AMD22_RS14000 PF13633 Prokaryotic N-terminal methylation site AMD22_RS14005 PF06580 AMD22_RS14005 AMD22_RS14010 PF03641 Possible lysine decarboxylase AMD22_RS14010 PF11892 Domain of unknown function (DUF3412) AMD22_RS14010 PF14793 Domain of unknown function (DUF4478) AMD22_RS14015 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS14015 PF13620 Carboxypeptidase regulatory-like domain AMD22_RS14020 PF01914 AMD22_RS14020 AMD22_RS14025 PF00106 short chain dehydrogenase AMD22_RS14030 PF00462 Glutaredoxin AMD22_RS14035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD22_RS14035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD22_RS14040 PF02222 ATP-grasp domain AMD22_RS14045 PF00731 AIR carboxylase AMD22_RS14050 PF03966 Trm112p-like protein AMD22_RS14055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD22_RS14055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD22_RS14060 PF10030 AMD22_RS14060 AMD22_RS14065 PF00013 KH domain AMD22_RS14065 PF00575 S1 RNA binding domain AMD22_RS14065 PF01138 3' exoribonuclease family, domain 1 AMD22_RS14065 PF03725 3' exoribonuclease family, domain 2 AMD22_RS14065 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD22_RS14070 PF00312 Ribosomal protein S15 AMD22_RS14075 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD22_RS14075 PF09157 Pseudouridine synthase II TruB, C-terminal AMD22_RS14075 PF16198 AMD22_RS14075 AMD22_RS14080 PF02033 Ribosome-binding factor A AMD22_RS14085 PF00009 Elongation factor Tu GTP binding domain AMD22_RS14085 PF04760 Translation initiation factor IF-2, N-terminal region AMD22_RS14085 PF08364 AMD22_RS14085 AMD22_RS14085 PF11987 Translation-initiation factor 2 AMD22_RS14090 PF00575 S1 RNA binding domain AMD22_RS14090 PF08529 NusA N-terminal domain AMD22_RS14090 PF13184 NusA-like KH domain AMD22_RS14090 PF14520 Helix-hairpin-helix domain AMD22_RS14095 PF02576 Uncharacterised BCR, YhbC family COG0779 AMD22_RS14105 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD22_RS14110 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD22_RS14115 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD22_RS14115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD22_RS14120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD22_RS14125 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD22_RS14130 PF12838 4Fe-4S dicluster domain AMD22_RS14135 PF00146 NADH dehydrogenase AMD22_RS14140 PF00384 Molybdopterin oxidoreductase AMD22_RS14140 PF01568 Molydopterin dinucleotide binding domain AMD22_RS14140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD22_RS14140 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD22_RS14145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD22_RS14145 PF10531 SLBB domain AMD22_RS14145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD22_RS14150 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AMD22_RS14155 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD22_RS14160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD22_RS14165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD22_RS14170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD22_RS14180 PF03840 Preprotein translocase SecG subunit AMD22_RS14185 PF00121 Triosephosphate isomerase AMD22_RS14190 PF00106 short chain dehydrogenase AMD22_RS14195 PF01152 Bacterial-like globin AMD22_RS14200 PF11231 AMD22_RS14200 AMD22_RS14205 PF00563 EAL domain AMD22_RS14205 PF00672 HAMP domain AMD22_RS14205 PF00990 GGDEF domain AMD22_RS14205 PF14827 Sensory domain of two-component sensor kinase AMD22_RS14215 PF03171 2OG-Fe(II) oxygenase superfamily AMD22_RS14215 PF14226 non-haem dioxygenase in morphine synthesis N-terminal AMD22_RS14225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD22_RS14225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD22_RS14225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD22_RS14225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD22_RS14230 PF01039 Carboxyl transferase domain AMD22_RS14235 PF00290 Tryptophan synthase alpha chain AMD22_RS14245 PF00291 Pyridoxal-phosphate dependent enzyme AMD22_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS14250 PF03466 LysR substrate binding domain AMD22_RS14255 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD22_RS14260 PF01416 tRNA pseudouridine synthase AMD22_RS14265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS14280 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD22_RS14280 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD22_RS14285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD22_RS14285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD22_RS14290 PF01264 Chorismate synthase AMD22_RS14295 PF05175 Methyltransferase small domain AMD22_RS14300 PF02630 SCO1/SenC AMD22_RS14305 PF02666 AMD22_RS14305 AMD22_RS14310 PF01464 Transglycosylase SLT domain AMD22_RS14310 PF01476 LysM domain AMD22_RS14315 PF05872 AMD22_RS14315 AMD22_RS14320 PF00293 NUDIX domain AMD22_RS14330 PF01694 Rhomboid family AMD22_RS14335 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD22_RS14335 PF03449 Transcription elongation factor, N-terminal AMD22_RS14340 PF00919 Uncharacterized protein family UPF0004 AMD22_RS14340 PF04055 Radical SAM superfamily AMD22_RS14345 PF01738 Dienelactone hydrolase family AMD22_RS14350 PF01230 HIT domain AMD22_RS14365 PF00692 dUTPase AMD22_RS14370 PF10609 ParA/MinD ATPase like AMD22_RS14375 PF00593 TonB dependent receptor AMD22_RS14375 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS14380 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS14385 PF01593 Flavin containing amine oxidoreductase AMD22_RS14390 PF01431 Peptidase family M13 AMD22_RS14390 PF05649 Peptidase family M13 AMD22_RS14395 PF01431 Peptidase family M13 AMD22_RS14395 PF05649 Peptidase family M13 AMD22_RS14400 PF01431 Peptidase family M13 AMD22_RS14400 PF05649 Peptidase family M13 AMD22_RS14405 PF01694 Rhomboid family AMD22_RS14410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD22_RS14415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD22_RS14415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS14420 PF01266 FAD dependent oxidoreductase AMD22_RS14425 PF04235 AMD22_RS14425 AMD22_RS14430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD22_RS14435 PF00877 NlpC/P60 family AMD22_RS14440 PF00877 NlpC/P60 family AMD22_RS14445 PF03061 Thioesterase superfamily AMD22_RS14450 PF13847 Methyltransferase domain AMD22_RS14455 PF00375 Sodium:dicarboxylate symporter family AMD22_RS14460 PF00245 Alkaline phosphatase AMD22_RS14465 PF01171 PP-loop family AMD22_RS14465 PF09179 TilS substrate binding domain AMD22_RS14465 PF11734 TilS substrate C-terminal domain AMD22_RS14470 PF02609 Exonuclease VII small subunit AMD22_RS14475 PF00348 Polyprenyl synthetase AMD22_RS14480 PF14521 Lysine-specific metallo-endopeptidase AMD22_RS14485 PF09685 AMD22_RS14485 AMD22_RS14490 PF01523 Putative modulator of DNA gyrase AMD22_RS14495 PF04751 Protein of unknown function (DUF615) AMD22_RS14500 PF01523 Putative modulator of DNA gyrase AMD22_RS14510 PF13116 AMD22_RS14510 AMD22_RS14510 PF13502 AMD22_RS14510 AMD22_RS14515 PF10150 Ribonuclease E/G family AMD22_RS14520 PF02545 Maf-like protein AMD22_RS14525 PF04402 Protein of unknown function (DUF541) AMD22_RS14530 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS14530 PF13620 Carboxypeptidase regulatory-like domain AMD22_RS14535 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS14540 PF02590 Predicted SPOUT methyltransferase AMD22_RS14545 PF05787 Bacterial protein of unknown function (DUF839) AMD22_RS14545 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD22_RS14550 PF02410 Oligomerisation domain AMD22_RS14555 PF01467 Cytidylyltransferase AMD22_RS14560 PF06144 DNA polymerase III, delta subunit AMD22_RS14565 PF04390 Lipopolysaccharide-assembly AMD22_RS14570 PF00133 tRNA synthetases class I (I, L, M and V) AMD22_RS14570 PF08264 Anticodon-binding domain of tRNA AMD22_RS14570 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD22_RS14575 PF06197 AMD22_RS14575 AMD22_RS14580 PF00085 Thioredoxin AMD22_RS14580 PF14559 Tetratricopeptide repeat AMD22_RS14580 PF14561 Tetratricopeptide repeat AMD22_RS14590 PF14539 Domain of unknown function (DUF4442) AMD22_RS14605 PF04070 AMD22_RS14605 AMD22_RS14610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD22_RS14615 PF00892 EamA-like transporter family AMD22_RS14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS14620 PF03466 LysR substrate binding domain AMD22_RS14635 PF14257 AMD22_RS14635 AMD22_RS14645 PF05960 Bacterial protein of unknown function (DUF885) AMD22_RS14650 PF00005 ABC transporter AMD22_RS14650 PF00664 ABC transporter transmembrane region AMD22_RS14655 PF07929 Plasmid pRiA4b ORF-3-like protein AMD22_RS14660 PF00873 AcrB/AcrD/AcrF family AMD22_RS14665 PF16576 AMD22_RS14665 AMD22_RS14670 PF06629 AMD22_RS14670 AMD22_RS14675 PF02321 Outer membrane efflux protein AMD22_RS14680 PF00072 Response regulator receiver domain AMD22_RS14680 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS14685 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS14685 PF00672 HAMP domain AMD22_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS14690 PF00999 Sodium/hydrogen exchanger family AMD22_RS14695 PF00144 Beta-lactamase AMD22_RS14695 PF11954 AMD22_RS14695 AMD22_RS14700 PF03737 Demethylmenaquinone methyltransferase AMD22_RS14710 PF01904 Protein of unknown function DUF72 AMD22_RS14715 PF00892 EamA-like transporter family AMD22_RS14720 PF00990 GGDEF domain AMD22_RS14720 PF01590 GAF domain AMD22_RS14725 PF00849 RNA pseudouridylate synthase AMD22_RS14725 PF01479 S4 domain AMD22_RS14730 PF00563 EAL domain AMD22_RS14730 PF00990 GGDEF domain AMD22_RS14730 PF08447 PAS fold AMD22_RS14735 PF00270 DEAD/DEAH box helicase AMD22_RS14735 PF00271 Helicase conserved C-terminal domain AMD22_RS14735 PF03880 DbpA RNA binding domain AMD22_RS14740 PF04542 Sigma-70 region 2 AMD22_RS14740 PF08281 Sigma-70, region 4 AMD22_RS14750 PF13275 S4 domain AMD22_RS14760 PF01124 MAPEG family AMD22_RS14765 PF13211 AMD22_RS14765 AMD22_RS14780 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD22_RS14780 PF02805 Metal binding domain of Ada AMD22_RS14780 PF06029 AlkA N-terminal domain AMD22_RS14780 PF12833 Helix-turn-helix domain AMD22_RS14785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD22_RS14785 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD22_RS14790 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AMD22_RS14795 PF00654 Voltage gated chloride channel AMD22_RS14800 PF00107 Zinc-binding dehydrogenase AMD22_RS14800 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS14805 PF17067 AMD22_RS14805 AMD22_RS14810 PF03203 AMD22_RS14810 AMD22_RS14815 PF00593 TonB dependent receptor AMD22_RS14815 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS14820 PF00593 TonB dependent receptor AMD22_RS14820 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS14825 PF00082 Subtilase family AMD22_RS14825 PF01483 Proprotein convertase P-domain AMD22_RS14835 PF00082 Subtilase family AMD22_RS14835 PF01483 Proprotein convertase P-domain AMD22_RS14845 PF00248 Aldo/keto reductase family AMD22_RS14850 PF07690 Major Facilitator Superfamily AMD22_RS14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS14855 PF03466 LysR substrate binding domain AMD22_RS14865 PF06719 AMD22_RS14865 AMD22_RS14865 PF12833 Helix-turn-helix domain AMD22_RS14870 PF07883 Cupin domain AMD22_RS14875 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS14880 PF02321 Outer membrane efflux protein AMD22_RS14885 PF00873 AcrB/AcrD/AcrF family AMD22_RS14890 PF00529 HlyD family secretion protein AMD22_RS14890 PF16576 AMD22_RS14890 AMD22_RS14895 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS14895 PF14246 AefR-like transcriptional repressor, C-terminal region AMD22_RS14900 PF01475 Ferric uptake regulator family AMD22_RS14905 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD22_RS14910 PF12275 AMD22_RS14910 AMD22_RS14915 PF00795 Carbon-nitrogen hydrolase AMD22_RS14930 PF06123 AMD22_RS14930 AMD22_RS14935 PF00112 Papain family cysteine protease AMD22_RS14940 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS14940 PF00672 HAMP domain AMD22_RS14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS14945 PF00072 Response regulator receiver domain AMD22_RS14945 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS14950 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AMD22_RS14955 PF00583 Acetyltransferase (GNAT) family AMD22_RS14960 PF00270 DEAD/DEAH box helicase AMD22_RS14960 PF00271 Helicase conserved C-terminal domain AMD22_RS14960 PF02559 CarD-like/TRCF domain AMD22_RS14960 PF03461 TRCF domain AMD22_RS14975 PF14412 AMD22_RS14975 AMD22_RS14980 PF07791 AMD22_RS14980 AMD22_RS14985 PF08845 AMD22_RS14985 AMD22_RS14990 PF13466 STAS domain AMD22_RS14995 PF01584 CheW-like domain AMD22_RS14995 PF01627 Hpt domain AMD22_RS14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS14995 PF02895 Signal transducing histidine kinase, homodimeric domain AMD22_RS15000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS15005 PF01584 CheW-like domain AMD22_RS15010 PF00072 Response regulator receiver domain AMD22_RS15010 PF00563 EAL domain AMD22_RS15015 PF01739 CheR methyltransferase, SAM binding domain AMD22_RS15015 PF03705 CheR methyltransferase, all-alpha domain AMD22_RS15020 PF00072 Response regulator receiver domain AMD22_RS15020 PF01339 CheB methylesterase AMD22_RS15025 PF13091 PLD-like domain AMD22_RS15030 PF01431 Peptidase family M13 AMD22_RS15030 PF05649 Peptidase family M13 AMD22_RS15040 PF00300 Histidine phosphatase superfamily (branch 1) AMD22_RS15045 PF04493 Endonuclease V AMD22_RS15055 PF02678 Pirin AMD22_RS15055 PF05726 Pirin C-terminal cupin domain AMD22_RS15065 PF02566 OsmC-like protein AMD22_RS15070 PF02678 Pirin AMD22_RS15070 PF05726 Pirin C-terminal cupin domain AMD22_RS15075 PF02554 AMD22_RS15075 AMD22_RS15075 PF13722 AMD22_RS15075 AMD22_RS15080 PF04328 AMD22_RS15080 AMD22_RS15085 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS15090 PF12796 Ankyrin repeats (3 copies) AMD22_RS15095 PF11187 Protein of unknown function (DUF2974) AMD22_RS15100 PF05684 AMD22_RS15100 AMD22_RS15115 PF12804 MobA-like NTP transferase domain AMD22_RS15120 PF00665 Integrase core domain AMD22_RS15125 PF01527 Transposase AMD22_RS15135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD22_RS15135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD22_RS15140 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD22_RS15140 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD22_RS15145 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD22_RS15145 PF01799 [2Fe-2S] binding domain AMD22_RS15150 PF00107 Zinc-binding dehydrogenase AMD22_RS15150 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS15155 PF00990 GGDEF domain AMD22_RS15155 PF02743 Cache domain AMD22_RS15160 PF00436 Single-strand binding protein family AMD22_RS15165 PF00348 Polyprenyl synthetase AMD22_RS15170 PF01738 Dienelactone hydrolase family AMD22_RS15175 PF02875 Mur ligase family, glutamate ligase domain AMD22_RS15175 PF08245 Mur ligase middle domain AMD22_RS15190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD22_RS15190 PF00696 Amino acid kinase family AMD22_RS15190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD22_RS15195 PF02567 Phenazine biosynthesis-like protein AMD22_RS15200 PF02567 Phenazine biosynthesis-like protein AMD22_RS15205 PF05433 AMD22_RS15205 AMD22_RS15210 PF02566 OsmC-like protein AMD22_RS15215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD22_RS15215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD22_RS15220 PF03652 Uncharacterised protein family (UPF0081) AMD22_RS15225 PF02622 Uncharacterized ACR, COG1678 AMD22_RS15235 PF03352 Methyladenine glycosylase AMD22_RS15240 PF01904 Protein of unknown function DUF72 AMD22_RS15245 PF03211 Pectate lyase AMD22_RS15250 PF00437 Type II/IV secretion system protein AMD22_RS15255 PF00437 Type II/IV secretion system protein AMD22_RS15260 PF01168 Alanine racemase, N-terminal domain AMD22_RS15265 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD22_RS15265 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD22_RS15270 PF00216 Bacterial DNA-binding protein AMD22_RS15275 PF01551 Peptidase family M23 AMD22_RS15280 PF12977 Domain of Unknown Function with PDB structure (DUF3861) AMD22_RS15290 PF07273 Protein of unknown function (DUF1439) AMD22_RS15295 PF01965 DJ-1/PfpI family AMD22_RS15300 PF00856 SET domain AMD22_RS15305 PF02082 Transcriptional regulator AMD22_RS15310 PF01458 Uncharacterized protein family (UPF0051) AMD22_RS15315 PF00005 ABC transporter AMD22_RS15320 PF01458 Uncharacterized protein family (UPF0051) AMD22_RS15325 PF00266 Aminotransferase class-V AMD22_RS15330 PF13673 Acetyltransferase (GNAT) domain AMD22_RS15335 PF00355 Rieske [2Fe-2S] domain AMD22_RS15340 PF00593 TonB dependent receptor AMD22_RS15340 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS15345 PF13640 2OG-Fe(II) oxygenase superfamily AMD22_RS15350 PF08238 Sel1 repeat AMD22_RS15355 PF16357 AMD22_RS15355 AMD22_RS15360 PF10029 AMD22_RS15360 AMD22_RS15365 PF10670 AMD22_RS15365 AMD22_RS15370 PF02424 ApbE family AMD22_RS15375 PF00175 Oxidoreductase NAD-binding domain AMD22_RS15375 PF00258 Flavodoxin AMD22_RS15380 PF13202 EF hand AMD22_RS15380 PF13499 EF-hand domain pair AMD22_RS15385 PF05962 HutD AMD22_RS15390 PF12836 Helix-hairpin-helix motif AMD22_RS15395 PF01546 Peptidase family M20/M25/M40 AMD22_RS15395 PF07687 Peptidase dimerisation domain AMD22_RS15400 PF04226 AMD22_RS15400 AMD22_RS15405 PF01636 Phosphotransferase enzyme family AMD22_RS15410 PF00483 Nucleotidyl transferase AMD22_RS15415 PF00308 Bacterial dnaA protein AMD22_RS15420 PF01594 AMD22_RS15420 AMD22_RS15425 PF09839 AMD22_RS15425 AMD22_RS15430 PF00586 AIR synthase related protein, N-terminal domain AMD22_RS15430 PF02769 AIR synthase related protein, C-terminal domain AMD22_RS15440 PF00551 Formyl transferase AMD22_RS15445 PF11306 Protein of unknown function (DUF3108) AMD22_RS15450 PF11306 Protein of unknown function (DUF3108) AMD22_RS15460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD22_RS15465 PF01722 BolA-like protein AMD22_RS15470 PF00571 CBS domain AMD22_RS15470 PF01380 SIS domain AMD22_RS15475 PF08282 haloacid dehalogenase-like hydrolase AMD22_RS15480 PF06835 Lipopolysaccharide-assembly, LptC-related AMD22_RS15485 PF03968 OstA-like protein AMD22_RS15490 PF00005 ABC transporter AMD22_RS15490 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD22_RS15495 PF00309 AMD22_RS15495 AMD22_RS15495 PF04552 Sigma-54, DNA binding domain AMD22_RS15495 PF04963 Sigma-54 factor, core binding domain AMD22_RS15500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD22_RS15505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD22_RS15510 PF02603 HPr Serine kinase N terminus AMD22_RS15510 PF07475 HPr Serine kinase C-terminal domain AMD22_RS15515 PF03668 AMD22_RS15515 AMD22_RS15520 PF03610 PTS system fructose IIA component AMD22_RS15525 PF00381 PTS HPr component phosphorylation site AMD22_RS15530 PF00391 PEP-utilising enzyme, mobile domain AMD22_RS15530 PF02896 PEP-utilising enzyme, TIM barrel domain AMD22_RS15530 PF05524 PEP-utilising enzyme, N-terminal AMD22_RS15535 PF00571 CBS domain AMD22_RS15535 PF01769 Divalent cation transporter AMD22_RS15535 PF03448 MgtE intracellular N domain AMD22_RS15540 PF00326 Prolyl oligopeptidase family AMD22_RS15545 PF02322 AMD22_RS15545 AMD22_RS15550 PF01654 AMD22_RS15550 AMD22_RS15555 PF01244 Membrane dipeptidase (Peptidase family M19) AMD22_RS15560 PF00324 Amino acid permease AMD22_RS15565 PF00544 Pectate lyase AMD22_RS15570 PF00561 alpha/beta hydrolase fold AMD22_RS15580 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS15580 PF03472 Autoinducer binding domain AMD22_RS15585 PF13520 Amino acid permease AMD22_RS15590 PF01764 Lipase (class 3) AMD22_RS15595 PF13365 Trypsin-like peptidase domain AMD22_RS15605 PF12706 Beta-lactamase superfamily domain AMD22_RS15610 PF04820 Tryptophan halogenase AMD22_RS15615 PF13621 Cupin-like domain AMD22_RS15620 PF07277 AMD22_RS15620 AMD22_RS15625 PF00593 TonB dependent receptor AMD22_RS15625 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS15635 PF00376 MerR family regulatory protein AMD22_RS15635 PF09278 MerR, DNA binding AMD22_RS15640 PF07690 Major Facilitator Superfamily AMD22_RS15650 PF03738 Glutathionylspermidine synthase preATP-grasp AMD22_RS15655 PF06693 AMD22_RS15655 AMD22_RS15660 PF03994 AMD22_RS15660 AMD22_RS15665 PF10679 AMD22_RS15665 AMD22_RS15670 PF07885 Ion channel AMD22_RS15675 PF04012 AMD22_RS15675 AMD22_RS15680 PF09938 AMD22_RS15680 AMD22_RS15685 PF01243 Pyridoxamine 5'-phosphate oxidase AMD22_RS15685 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD22_RS15690 PF01202 Shikimate kinase AMD22_RS15695 PF01761 3-dehydroquinate synthase AMD22_RS15705 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD22_RS15710 PF11747 AMD22_RS15710 AMD22_RS15715 PF11747 AMD22_RS15715 AMD22_RS15720 PF11747 AMD22_RS15720 AMD22_RS15725 PF11747 AMD22_RS15725 AMD22_RS15735 PF11747 AMD22_RS15735 AMD22_RS15740 PF11747 AMD22_RS15740 AMD22_RS15760 PF08924 Domain of unknown function (DUF1906) AMD22_RS15775 PF12833 Helix-turn-helix domain AMD22_RS15775 PF14532 Sigma-54 interaction domain AMD22_RS15780 PF07690 Major Facilitator Superfamily AMD22_RS15785 PF00072 Response regulator receiver domain AMD22_RS15785 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS15785 PF07494 Two component regulator propeller AMD22_RS15785 PF07495 Y_Y_Y domain AMD22_RS15790 PF00072 Response regulator receiver domain AMD22_RS15790 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS15790 PF07494 Two component regulator propeller AMD22_RS15790 PF07495 Y_Y_Y domain AMD22_RS15800 PF00072 Response regulator receiver domain AMD22_RS15800 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS15800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS15800 PF07494 Two component regulator propeller AMD22_RS15800 PF07495 Y_Y_Y domain AMD22_RS15805 PF04264 YceI-like domain AMD22_RS15810 PF01292 Prokaryotic cytochrome b561 AMD22_RS15815 PF04264 YceI-like domain AMD22_RS15820 PF05768 Glutaredoxin-like domain (DUF836) AMD22_RS15825 PF03313 AMD22_RS15825 AMD22_RS15825 PF03315 Serine dehydratase beta chain AMD22_RS15830 PF00561 alpha/beta hydrolase fold AMD22_RS15835 PF00742 Homoserine dehydrogenase AMD22_RS15835 PF03447 Homoserine dehydrogenase, NAD binding domain AMD22_RS15840 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD22_RS15845 PF00561 alpha/beta hydrolase fold AMD22_RS15850 PF01551 Peptidase family M23 AMD22_RS15855 PF00009 Elongation factor Tu GTP binding domain AMD22_RS15855 PF16658 AMD22_RS15855 AMD22_RS15860 PF03006 AMD22_RS15860 AMD22_RS15865 PF05170 AMD22_RS15865 AMD22_RS15870 PF00571 CBS domain AMD22_RS15875 PF00535 Glycosyl transferase family 2 AMD22_RS15880 PF00912 Transglycosylase AMD22_RS15885 PF01430 Hsp33 protein AMD22_RS15895 PF00593 TonB dependent receptor AMD22_RS15895 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS15900 PF13181 Tetratricopeptide repeat AMD22_RS15900 PF13469 Sulfotransferase family AMD22_RS15905 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS15910 PF12146 Putative lysophospholipase AMD22_RS15915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD22_RS15915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD22_RS15915 PF09317 AMD22_RS15915 AMD22_RS15920 PF06993 AMD22_RS15920 AMD22_RS15925 PF07690 Major Facilitator Superfamily AMD22_RS15930 PF00144 Beta-lactamase AMD22_RS15940 PF01597 Glycine cleavage H-protein AMD22_RS15945 PF01571 Aminomethyltransferase folate-binding domain AMD22_RS15945 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD22_RS15950 PF01957 NfeD-like C-terminal, partner-binding AMD22_RS15955 PF16200 AMD22_RS15955 AMD22_RS15960 PF02694 AMD22_RS15960 AMD22_RS15965 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD22_RS15970 PF00459 Inositol monophosphatase family AMD22_RS15975 PF00293 NUDIX domain AMD22_RS15980 PF00202 Aminotransferase class-III AMD22_RS15985 PF04452 RNA methyltransferase AMD22_RS15990 PF02685 Glucokinase AMD22_RS15995 PF00593 TonB dependent receptor AMD22_RS15995 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16000 PF01120 Alpha-L-fucosidase AMD22_RS16000 PF16757 AMD22_RS16000 AMD22_RS16005 PF00704 Glycosyl hydrolases family 18 AMD22_RS16010 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD22_RS16010 PF02838 Glycosyl hydrolase family 20, domain 2 AMD22_RS16010 PF13290 AMD22_RS16010 AMD22_RS16015 PF00703 Glycosyl hydrolases family 2 AMD22_RS16020 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD22_RS16020 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD22_RS16020 PF07691 PA14 domain AMD22_RS16020 PF14310 Fibronectin type III-like domain AMD22_RS16025 PF00593 TonB dependent receptor AMD22_RS16025 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16025 PF13620 Carboxypeptidase regulatory-like domain AMD22_RS16030 PF01301 Glycosyl hydrolases family 35 AMD22_RS16035 PF13520 Amino acid permease AMD22_RS16040 PF00294 pfkB family carbohydrate kinase AMD22_RS16045 PF02056 Family 4 glycosyl hydrolase AMD22_RS16045 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD22_RS16050 PF06824 Protein of unknown function (DUF1237) AMD22_RS16055 PF07971 Glycosyl hydrolase family 92 AMD22_RS16060 PF01301 Glycosyl hydrolases family 35 AMD22_RS16075 PF11747 AMD22_RS16075 AMD22_RS16080 PF13088 BNR repeat-like domain AMD22_RS16090 PF03932 CutC family AMD22_RS16095 PF01112 Asparaginase AMD22_RS16105 PF13302 Acetyltransferase (GNAT) domain AMD22_RS16110 PF01584 CheW-like domain AMD22_RS16115 PF01339 CheB methylesterase AMD22_RS16120 PF00072 Response regulator receiver domain AMD22_RS16120 PF01584 CheW-like domain AMD22_RS16120 PF01627 Hpt domain AMD22_RS16120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS16120 PF02895 Signal transducing histidine kinase, homodimeric domain AMD22_RS16125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS16130 PF01584 CheW-like domain AMD22_RS16135 PF00072 Response regulator receiver domain AMD22_RS16140 PF00072 Response regulator receiver domain AMD22_RS16145 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD22_RS16145 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD22_RS16150 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS16155 PF03747 ADP-ribosylglycohydrolase AMD22_RS16160 PF00814 Glycoprotease family AMD22_RS16165 PF00270 DEAD/DEAH box helicase AMD22_RS16165 PF13307 Helicase C-terminal domain AMD22_RS16175 PF00905 Penicillin binding protein transpeptidase domain AMD22_RS16175 PF00912 Transglycosylase AMD22_RS16175 PF14814 Bifunctional transglycosylase second domain AMD22_RS16180 PF00535 Glycosyl transferase family 2 AMD22_RS16180 PF13692 Glycosyl transferases group 1 AMD22_RS16190 PF02824 TGS domain AMD22_RS16190 PF04607 Region found in RelA / SpoT proteins AMD22_RS16190 PF13291 ACT domain AMD22_RS16190 PF13328 HD domain AMD22_RS16195 PF12706 Beta-lactamase superfamily domain AMD22_RS16200 PF03070 TENA/THI-4/PQQC family AMD22_RS16205 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD22_RS16210 PF04055 Radical SAM superfamily AMD22_RS16210 PF13186 Iron-sulfur cluster-binding domain AMD22_RS16210 PF13353 4Fe-4S single cluster domain AMD22_RS16220 PF10142 PhoPQ-activated pathogenicity-related protein AMD22_RS16225 PF02685 Glucokinase AMD22_RS16230 PF00593 TonB dependent receptor AMD22_RS16230 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16235 PF00270 DEAD/DEAH box helicase AMD22_RS16235 PF00271 Helicase conserved C-terminal domain AMD22_RS16235 PF04408 Helicase associated domain (HA2) AMD22_RS16235 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD22_RS16235 PF11898 AMD22_RS16235 AMD22_RS16240 PF00210 Ferritin-like domain AMD22_RS16245 PF00270 DEAD/DEAH box helicase AMD22_RS16245 PF00271 Helicase conserved C-terminal domain AMD22_RS16245 PF00570 HRDC domain AMD22_RS16245 PF09382 RQC domain AMD22_RS16245 PF16124 AMD22_RS16245 AMD22_RS16255 PF00072 Response regulator receiver domain AMD22_RS16265 PF01479 S4 domain AMD22_RS16280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS16280 PF00672 HAMP domain AMD22_RS16280 PF12729 AMD22_RS16280 AMD22_RS16285 PF01810 AMD22_RS16285 AMD22_RS16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS16290 PF03466 LysR substrate binding domain AMD22_RS16295 PF00072 Response regulator receiver domain AMD22_RS16300 PF07536 AMD22_RS16300 AMD22_RS16300 PF08448 PAS fold AMD22_RS16305 PF06508 Queuosine biosynthesis protein QueC AMD22_RS16315 PF04055 Radical SAM superfamily AMD22_RS16315 PF13394 4Fe-4S single cluster domain AMD22_RS16320 PF13525 Outer membrane lipoprotein AMD22_RS16320 PF16331 AMD22_RS16320 AMD22_RS16325 PF00691 OmpA family AMD22_RS16330 PF04052 TolB amino-terminal domain AMD22_RS16330 PF07676 WD40-like Beta Propeller Repeat AMD22_RS16335 PF13103 TonB C terminal AMD22_RS16340 PF02472 Biopolymer transport protein ExbD/TolR AMD22_RS16345 PF01618 AMD22_RS16345 AMD22_RS16350 PF03061 Thioesterase superfamily AMD22_RS16355 PF05491 Holliday junction DNA helicase ruvB C-terminus AMD22_RS16355 PF05496 Holliday junction DNA helicase ruvB N-terminus AMD22_RS16365 PF02705 AMD22_RS16365 AMD22_RS16370 PF01330 RuvA N terminal domain AMD22_RS16370 PF07499 RuvA, C-terminal domain AMD22_RS16370 PF14520 Helix-hairpin-helix domain AMD22_RS16375 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD22_RS16380 PF01709 Transcriptional regulator AMD22_RS16385 PF12697 Alpha/beta hydrolase family AMD22_RS16390 PF13673 Acetyltransferase (GNAT) domain AMD22_RS16395 PF00152 tRNA synthetases class II (D, K and N) AMD22_RS16395 PF01336 OB-fold nucleic acid binding domain AMD22_RS16395 PF02938 GAD domain AMD22_RS16400 PF11218 AMD22_RS16400 AMD22_RS16405 PF09723 AMD22_RS16405 AMD22_RS16410 PF07690 Major Facilitator Superfamily AMD22_RS16415 PF00593 TonB dependent receptor AMD22_RS16415 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16430 PF13354 Beta-lactamase enzyme family AMD22_RS16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS16435 PF03466 LysR substrate binding domain AMD22_RS16440 PF14317 AMD22_RS16440 AMD22_RS16445 PF00005 ABC transporter AMD22_RS16445 PF12848 ABC transporter AMD22_RS16445 PF16326 AMD22_RS16445 AMD22_RS16450 PF00593 TonB dependent receptor AMD22_RS16450 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS16465 PF00593 TonB dependent receptor AMD22_RS16465 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16470 PF00593 TonB dependent receptor AMD22_RS16470 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16475 PF00067 Cytochrome P450 AMD22_RS16480 PF00999 Sodium/hydrogen exchanger family AMD22_RS16480 PF02254 TrkA-N domain AMD22_RS16500 PF03328 HpcH/HpaI aldolase/citrate lyase family AMD22_RS16505 PF00593 TonB dependent receptor AMD22_RS16505 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16510 PF02655 ATP-grasp domain AMD22_RS16515 PF04183 IucA / IucC family AMD22_RS16515 PF06276 Ferric iron reductase FhuF-like transporter AMD22_RS16520 PF07690 Major Facilitator Superfamily AMD22_RS16525 PF04183 IucA / IucC family AMD22_RS16525 PF06276 Ferric iron reductase FhuF-like transporter AMD22_RS16530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD22_RS16530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD22_RS16545 PF02654 AMD22_RS16545 AMD22_RS16550 PF00300 Histidine phosphatase superfamily (branch 1) AMD22_RS16555 PF02277 Phosphoribosyltransferase AMD22_RS16560 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD22_RS16565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD22_RS16565 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD22_RS16570 PF00155 Aminotransferase class I and II AMD22_RS16575 PF03186 AMD22_RS16575 AMD22_RS16580 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD22_RS16580 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD22_RS16595 PF00593 TonB dependent receptor AMD22_RS16595 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16600 PF00004 ATPase family associated with various cellular activities (AAA) AMD22_RS16600 PF02861 Clp amino terminal domain AMD22_RS16600 PF07724 AAA domain (Cdc48 subfamily) AMD22_RS16600 PF10431 C-terminal, D2-small domain, of ClpB protein AMD22_RS16605 PF00005 ABC transporter AMD22_RS16610 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS16615 PF09084 NMT1/THI5 like AMD22_RS16620 PF00248 Aldo/keto reductase family AMD22_RS16625 PF00296 Luciferase-like monooxygenase AMD22_RS16630 PF00593 TonB dependent receptor AMD22_RS16630 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16635 PF01541 GIY-YIG catalytic domain AMD22_RS16640 PF14497 Glutathione S-transferase, C-terminal domain AMD22_RS16645 PF11219 AMD22_RS16645 AMD22_RS16650 PF07007 Protein of unknown function (DUF1311) AMD22_RS16665 PF12098 AMD22_RS16665 AMD22_RS16670 PF00593 TonB dependent receptor AMD22_RS16670 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS16675 PF02358 Trehalose-phosphatase AMD22_RS16680 PF00723 Glycosyl hydrolases family 15 AMD22_RS16685 PF00982 Glycosyltransferase family 20 AMD22_RS16690 PF01011 PQQ enzyme repeat AMD22_RS16690 PF13360 PQQ-like domain AMD22_RS16695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS16700 PF04134 AMD22_RS16700 AMD22_RS16705 PF13761 AMD22_RS16705 AMD22_RS16710 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD22_RS16715 PF00849 RNA pseudouridylate synthase AMD22_RS16720 PF13525 Outer membrane lipoprotein AMD22_RS16730 PF00795 Carbon-nitrogen hydrolase AMD22_RS16730 PF02540 NAD synthase AMD22_RS16735 PF04480 Protein of unknown function (DUF559) AMD22_RS16740 PF01527 Transposase AMD22_RS16750 PF13333 AMD22_RS16750 AMD22_RS16760 PF01471 Putative peptidoglycan binding domain AMD22_RS16760 PF13406 Transglycosylase SLT domain AMD22_RS16765 PF01526 AMD22_RS16765 AMD22_RS16765 PF13700 AMD22_RS16765 AMD22_RS16770 PF00589 Phage integrase family AMD22_RS16780 PF11740 AMD22_RS16780 AMD22_RS16785 PF01129 NAD:arginine ADP-ribosyltransferase AMD22_RS16800 PF12760 Transposase zinc-ribbon domain AMD22_RS16800 PF12762 AMD22_RS16800 AMD22_RS16805 PF00549 CoA-ligase AMD22_RS16805 PF02629 CoA binding domain AMD22_RS16810 PF00549 CoA-ligase AMD22_RS16810 PF08442 ATP-grasp domain AMD22_RS16815 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS16820 PF00072 Response regulator receiver domain AMD22_RS16820 PF00158 Sigma-54 interaction domain AMD22_RS16820 PF02954 Bacterial regulatory protein, Fis family AMD22_RS16835 PF00437 Type II/IV secretion system protein AMD22_RS16835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD22_RS16840 PF00114 Pilin (bacterial filament) AMD22_RS16840 PF13633 Prokaryotic N-terminal methylation site AMD22_RS16845 PF00114 Pilin (bacterial filament) AMD22_RS16845 PF13633 Prokaryotic N-terminal methylation site AMD22_RS16850 PF00482 Type II secretion system (T2SS), protein F AMD22_RS16855 PF01478 Type IV leader peptidase family AMD22_RS16855 PF06750 AMD22_RS16855 AMD22_RS16860 PF01121 Dephospho-CoA kinase AMD22_RS16865 PF05593 AMD22_RS16865 AMD22_RS16870 PF08845 AMD22_RS16870 AMD22_RS16875 PF01527 Transposase AMD22_RS16880 PF00665 Integrase core domain AMD22_RS16880 PF13276 AMD22_RS16880 AMD22_RS16885 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS16885 PF00672 HAMP domain AMD22_RS16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS16890 PF00072 Response regulator receiver domain AMD22_RS16890 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS16900 PF08443 RimK-like ATP-grasp domain AMD22_RS16905 PF00128 Alpha amylase, catalytic domain AMD22_RS16905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD22_RS16910 PF00816 H-NS histone family AMD22_RS16920 PF00565 Staphylococcal nuclease homologue AMD22_RS16930 PF03389 MobA/MobL family AMD22_RS16940 PF03167 Uracil DNA glycosylase superfamily AMD22_RS16945 PF14412 AMD22_RS16945 AMD22_RS16950 PF07791 AMD22_RS16950 AMD22_RS16960 PF04002 RadC-like JAB domain AMD22_RS16975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS16985 PF08448 PAS fold AMD22_RS16990 PF00072 Response regulator receiver domain AMD22_RS17005 PF04940 Sensors of blue-light using FAD AMD22_RS17030 PF01527 Transposase AMD22_RS17035 PF00665 Integrase core domain AMD22_RS17045 PF16162 AMD22_RS17045 AMD22_RS17055 PF13560 Helix-turn-helix domain AMD22_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS17075 PF08448 PAS fold AMD22_RS17085 PF02517 CAAX protease self-immunity AMD22_RS17100 PF13676 TIR domain AMD22_RS17105 PF00589 Phage integrase family AMD22_RS17115 PF00657 GDSL-like Lipase/Acylhydrolase AMD22_RS17115 PF03797 Autotransporter beta-domain AMD22_RS17120 PF02597 ThiS family AMD22_RS17125 PF05690 Thiazole biosynthesis protein ThiG AMD22_RS17130 PF02390 Putative methyltransferase AMD22_RS17135 PF02080 TrkA-C domain AMD22_RS17135 PF03600 Citrate transporter AMD22_RS17140 PF00355 Rieske [2Fe-2S] domain AMD22_RS17150 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD22_RS17155 PF01741 Large-conductance mechanosensitive channel, MscL AMD22_RS17160 PF04389 Peptidase family M28 AMD22_RS17170 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS17170 PF13377 Periplasmic binding protein-like domain AMD22_RS17175 PF00593 TonB dependent receptor AMD22_RS17175 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17180 PF00703 Glycosyl hydrolases family 2 AMD22_RS17180 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD22_RS17180 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD22_RS17180 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD22_RS17185 PF10566 Glycoside hydrolase 97 AMD22_RS17185 PF14508 Glycosyl-hydrolase 97 N-terminal AMD22_RS17185 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD22_RS17190 PF03080 AMD22_RS17190 AMD22_RS17195 PF00135 Carboxylesterase family AMD22_RS17200 PF00588 SpoU rRNA Methylase family AMD22_RS17200 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD22_RS17205 PF13302 Acetyltransferase (GNAT) domain AMD22_RS17210 PF01433 Peptidase family M1 AMD22_RS17210 PF11838 ERAP1-like C-terminal domain AMD22_RS17215 PF07791 AMD22_RS17215 AMD22_RS17220 PF13333 AMD22_RS17220 AMD22_RS17230 PF01527 Transposase AMD22_RS17235 PF07791 AMD22_RS17235 AMD22_RS17260 PF00873 AcrB/AcrD/AcrF family AMD22_RS17265 PF16576 AMD22_RS17265 AMD22_RS17270 PF00009 Elongation factor Tu GTP binding domain AMD22_RS17270 PF01583 Adenylylsulphate kinase AMD22_RS17275 PF01507 Phosphoadenosine phosphosulfate reductase family AMD22_RS17280 PF00175 Oxidoreductase NAD-binding domain AMD22_RS17280 PF00258 Flavodoxin AMD22_RS17280 PF00667 FAD binding domain AMD22_RS17285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD22_RS17285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD22_RS17290 PF01507 Phosphoadenosine phosphosulfate reductase family AMD22_RS17295 PF03929 AMD22_RS17295 AMD22_RS17300 PF00593 TonB dependent receptor AMD22_RS17300 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17310 PF01590 GAF domain AMD22_RS17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS17325 PF03466 LysR substrate binding domain AMD22_RS17330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD22_RS17335 PF00291 Pyridoxal-phosphate dependent enzyme AMD22_RS17340 PF04191 Phospholipid methyltransferase AMD22_RS17345 PF01661 Macro domain AMD22_RS17350 PF00274 Fructose-bisphosphate aldolase class-I AMD22_RS17355 PF00224 Pyruvate kinase, barrel domain AMD22_RS17355 PF02887 Pyruvate kinase, alpha/beta domain AMD22_RS17360 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS17365 PF00162 Phosphoglycerate kinase AMD22_RS17370 PF13163 AMD22_RS17370 AMD22_RS17375 PF10101 AMD22_RS17375 AMD22_RS17385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD22_RS17385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD22_RS17390 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD22_RS17395 PF03922 OmpW family AMD22_RS17400 PF03922 OmpW family AMD22_RS17405 PF02265 S1/P1 Nuclease AMD22_RS17410 PF00753 Metallo-beta-lactamase superfamily AMD22_RS17415 PF13531 Bacterial extracellular solute-binding protein AMD22_RS17420 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS17425 PF00005 ABC transporter AMD22_RS17435 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS17435 PF05569 BlaR1 peptidase M56 AMD22_RS17440 PF03965 Penicillinase repressor AMD22_RS17445 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AMD22_RS17450 PF16670 AMD22_RS17450 AMD22_RS17455 PF00593 TonB dependent receptor AMD22_RS17455 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17460 PF01471 Putative peptidoglycan binding domain AMD22_RS17460 PF03734 L,D-transpeptidase catalytic domain AMD22_RS17465 PF01551 Peptidase family M23 AMD22_RS17475 PF00593 TonB dependent receptor AMD22_RS17475 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17490 PF00456 Transketolase, thiamine diphosphate binding domain AMD22_RS17490 PF02779 Transketolase, pyrimidine binding domain AMD22_RS17490 PF02780 Transketolase, C-terminal domain AMD22_RS17495 PF00375 Sodium:dicarboxylate symporter family AMD22_RS17500 PF13584 AMD22_RS17500 AMD22_RS17505 PF00515 Tetratricopeptide repeat AMD22_RS17505 PF13519 von Willebrand factor type A domain AMD22_RS17510 PF00092 von Willebrand factor type A domain AMD22_RS17515 PF14316 AMD22_RS17515 AMD22_RS17520 PF01882 AMD22_RS17520 AMD22_RS17525 PF07726 ATPase family associated with various cellular activities (AAA) AMD22_RS17530 PF00263 AMD22_RS17530 AMD22_RS17530 PF03958 Bacterial type II/III secretion system short domain AMD22_RS17530 PF07660 Secretin and TonB N terminus short domain AMD22_RS17535 PF04351 Pilus assembly protein, PilP AMD22_RS17540 PF04350 Pilus assembly protein, PilO AMD22_RS17545 PF05137 AMD22_RS17545 AMD22_RS17550 PF11104 Type IV pilus assembly protein PilM; AMD22_RS17555 PF00905 Penicillin binding protein transpeptidase domain AMD22_RS17555 PF00912 Transglycosylase AMD22_RS17555 PF17092 AMD22_RS17555 AMD22_RS17565 PF00285 Citrate synthase AMD22_RS17570 PF01197 Ribosomal protein L31 AMD22_RS17575 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD22_RS17580 PF00270 DEAD/DEAH box helicase AMD22_RS17580 PF00271 Helicase conserved C-terminal domain AMD22_RS17580 PF17191 AMD22_RS17580 AMD22_RS17585 PF01042 Endoribonuclease L-PSP AMD22_RS17590 PF02824 TGS domain AMD22_RS17590 PF04607 Region found in RelA / SpoT proteins AMD22_RS17590 PF13291 ACT domain AMD22_RS17590 PF13328 HD domain AMD22_RS17595 PF01192 RNA polymerase Rpb6 AMD22_RS17600 PF00625 Guanylate kinase AMD22_RS17605 PF03755 AMD22_RS17605 AMD22_RS17605 PF08340 AMD22_RS17605 AMD22_RS17610 PF01138 3' exoribonuclease family, domain 1 AMD22_RS17610 PF03725 3' exoribonuclease family, domain 2 AMD22_RS17615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS17620 PF01725 Ham1 family AMD22_RS17625 PF04055 Radical SAM superfamily AMD22_RS17625 PF06969 HemN C-terminal domain AMD22_RS17630 PF07793 AMD22_RS17630 AMD22_RS17635 PF07238 PilZ domain AMD22_RS17640 PF00557 Metallopeptidase family M24 AMD22_RS17650 PF00557 Metallopeptidase family M24 AMD22_RS17650 PF05195 Aminopeptidase P, N-terminal domain AMD22_RS17655 PF03695 Uncharacterised protein family (UPF0149) AMD22_RS17665 PF05164 Cell division protein ZapA AMD22_RS17670 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD22_RS17675 PF01878 EVE domain AMD22_RS17680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD22_RS17685 PF02643 Uncharacterized ACR, COG1430 AMD22_RS17690 PF13369 AMD22_RS17690 AMD22_RS17690 PF13371 Tetratricopeptide repeat AMD22_RS17695 PF00301 Rubredoxin AMD22_RS17700 PF02581 Thiamine monophosphate synthase/TENI AMD22_RS17705 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17715 PF00202 Aminotransferase class-III AMD22_RS17720 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS17720 PF13424 Tetratricopeptide repeat AMD22_RS17720 PF13481 AAA domain AMD22_RS17725 PF00127 Copper binding proteins, plastocyanin/azurin family AMD22_RS17730 PF00155 Aminotransferase class I and II AMD22_RS17735 PF01042 Endoribonuclease L-PSP AMD22_RS17740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD22_RS17745 PF01593 Flavin containing amine oxidoreductase AMD22_RS17750 PF00593 TonB dependent receptor AMD22_RS17750 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17760 PF00202 Aminotransferase class-III AMD22_RS17765 PF00520 Ion transport protein AMD22_RS17770 PF00106 short chain dehydrogenase AMD22_RS17780 PF01569 PAP2 superfamily AMD22_RS17780 PF09335 AMD22_RS17780 AMD22_RS17780 PF14067 AMD22_RS17780 AMD22_RS17785 PF01062 AMD22_RS17785 AMD22_RS17790 PF02190 ATP-dependent protease La (LON) domain AMD22_RS17795 PF01225 Mur ligase family, catalytic domain AMD22_RS17795 PF02875 Mur ligase family, glutamate ligase domain AMD22_RS17795 PF08245 Mur ligase middle domain AMD22_RS17800 PF00406 Adenylate kinase AMD22_RS17805 PF00365 Phosphofructokinase AMD22_RS17815 PF03030 Inorganic H+ pyrophosphatase AMD22_RS17825 PF00719 Inorganic pyrophosphatase AMD22_RS17830 PF08668 HDOD domain AMD22_RS17835 PF00593 TonB dependent receptor AMD22_RS17835 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17840 PF12833 Helix-turn-helix domain AMD22_RS17845 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS17845 PF07676 WD40-like Beta Propeller Repeat AMD22_RS17850 PF01964 ThiC family AMD22_RS17850 PF13667 ThiC-associated domain AMD22_RS17855 PF00593 TonB dependent receptor AMD22_RS17855 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS17860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS17865 PF01019 Gamma-glutamyltranspeptidase AMD22_RS17870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD22_RS17870 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMD22_RS17875 PF00205 Thiamine pyrophosphate enzyme, central domain AMD22_RS17875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD22_RS17875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD22_RS17880 PF13710 ACT domain AMD22_RS17885 PF00291 Pyridoxal-phosphate dependent enzyme AMD22_RS17890 PF00682 HMGL-like AMD22_RS17890 PF08502 LeuA allosteric (dimerisation) domain AMD22_RS17895 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD22_RS17900 PF00694 Aconitase C-terminal domain AMD22_RS17905 PF00330 Aconitase family (aconitate hydratase) AMD22_RS17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS17910 PF03466 LysR substrate binding domain AMD22_RS17915 PF00990 GGDEF domain AMD22_RS17915 PF07494 Two component regulator propeller AMD22_RS17915 PF07495 Y_Y_Y domain AMD22_RS17920 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS17920 PF14246 AefR-like transcriptional repressor, C-terminal region AMD22_RS17925 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD22_RS17930 PF02321 Outer membrane efflux protein AMD22_RS17935 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD22_RS17940 PF03279 AMD22_RS17940 AMD22_RS17945 PF04932 AMD22_RS17945 AMD22_RS17950 PF00534 Glycosyl transferases group 1 AMD22_RS17950 PF13439 Glycosyltransferase Family 4 AMD22_RS17955 PF10276 Zinc-finger domain AMD22_RS17960 PF07971 Glycosyl hydrolase family 92 AMD22_RS17965 PF00390 Malic enzyme, N-terminal domain AMD22_RS17965 PF01515 Phosphate acetyl/butaryl transferase AMD22_RS17965 PF03949 Malic enzyme, NAD binding domain AMD22_RS17970 PF00375 Sodium:dicarboxylate symporter family AMD22_RS17975 PF07396 Phosphate-selective porin O and P AMD22_RS17980 PF00072 Response regulator receiver domain AMD22_RS17980 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS17980 PF02743 Cache domain AMD22_RS17980 PF12860 AMD22_RS17980 AMD22_RS17985 PF00083 Sugar (and other) transporter AMD22_RS17990 PF13531 Bacterial extracellular solute-binding protein AMD22_RS17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS17995 PF03466 LysR substrate binding domain AMD22_RS18000 PF00248 Aldo/keto reductase family AMD22_RS18005 PF12680 SnoaL-like domain AMD22_RS18010 PF11512 Agrobacterium tumefaciens protein Atu4866 AMD22_RS18015 PF00072 Response regulator receiver domain AMD22_RS18015 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS18020 PF13531 Bacterial extracellular solute-binding protein AMD22_RS18025 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS18025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS18025 PF08521 AMD22_RS18025 AMD22_RS18030 PF00072 Response regulator receiver domain AMD22_RS18030 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS18035 PF07396 Phosphate-selective porin O and P AMD22_RS18040 PF03600 Citrate transporter AMD22_RS18045 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS18050 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS18050 PF13377 Periplasmic binding protein-like domain AMD22_RS18055 PF07690 Major Facilitator Superfamily AMD22_RS18060 PF00593 TonB dependent receptor AMD22_RS18060 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS18065 PF00128 Alpha amylase, catalytic domain AMD22_RS18070 PF01965 DJ-1/PfpI family AMD22_RS18075 PF08014 AMD22_RS18075 AMD22_RS18080 PF03193 Protein of unknown function, DUF258 AMD22_RS18085 PF00155 Aminotransferase class I and II AMD22_RS18090 PF13472 GDSL-like Lipase/Acylhydrolase family AMD22_RS18095 PF08242 Methyltransferase domain AMD22_RS18100 PF00593 TonB dependent receptor AMD22_RS18100 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS18105 PF01522 Polysaccharide deacetylase AMD22_RS18110 PF00462 Glutaredoxin AMD22_RS18110 PF00581 Rhodanese-like domain AMD22_RS18120 PF06041 Bacterial protein of unknown function (DUF924) AMD22_RS18125 PF01527 Transposase AMD22_RS18130 PF13683 AMD22_RS18130 AMD22_RS18135 PF09284 Rhamnogalacturonase B, N-terminal AMD22_RS18135 PF14683 Polysaccharide lyase family 4, domain III AMD22_RS18135 PF14686 Polysaccharide lyase family 4, domain II AMD22_RS18145 PF02645 Uncharacterised protein, DegV family COG1307 AMD22_RS18150 PF01327 Polypeptide deformylase AMD22_RS18155 PF03960 ArsC family AMD22_RS18165 PF02225 PA domain AMD22_RS18170 PF05420 AMD22_RS18170 AMD22_RS18170 PF13432 Tetratricopeptide repeat AMD22_RS18170 PF14559 Tetratricopeptide repeat AMD22_RS18175 PF01270 Glycosyl hydrolases family 8 AMD22_RS18180 PF03170 Bacterial cellulose synthase subunit AMD22_RS18185 PF00535 Glycosyl transferase family 2 AMD22_RS18185 PF07238 PilZ domain AMD22_RS18200 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD22_RS18220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD22_RS18220 PF13641 Glycosyltransferase like family 2 AMD22_RS18230 PF00535 Glycosyl transferase family 2 AMD22_RS18240 PF01636 Phosphotransferase enzyme family AMD22_RS18245 PF00593 TonB dependent receptor AMD22_RS18245 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS18250 PF04973 AMD22_RS18250 AMD22_RS18255 PF00392 Bacterial regulatory proteins, gntR family AMD22_RS18255 PF07702 UTRA domain AMD22_RS18265 PF00263 AMD22_RS18265 AMD22_RS18265 PF03958 Bacterial type II/III secretion system short domain AMD22_RS18275 PF10741 AMD22_RS18275 AMD22_RS18280 PF05137 AMD22_RS18280 AMD22_RS18285 PF03934 Type II secretion system (T2SS), protein K AMD22_RS18295 PF13544 AMD22_RS18295 AMD22_RS18300 PF12019 Type II transport protein GspH AMD22_RS18305 PF08334 Type II secretion system (T2SS), protein G AMD22_RS18310 PF00482 Type II secretion system (T2SS), protein F AMD22_RS18315 PF00437 Type II/IV secretion system protein AMD22_RS18315 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD22_RS18320 PF00082 Subtilase family AMD22_RS18320 PF04151 Bacterial pre-peptidase C-terminal domain AMD22_RS18325 PF05658 Head domain of trimeric autotransporter adhesin AMD22_RS18325 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD22_RS18325 PF13018 AMD22_RS18325 AMD22_RS18330 PF00082 Subtilase family AMD22_RS18330 PF04151 Bacterial pre-peptidase C-terminal domain AMD22_RS18335 PF03895 YadA-like C-terminal region AMD22_RS18335 PF05658 Head domain of trimeric autotransporter adhesin AMD22_RS18335 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD22_RS18345 PF02769 AIR synthase related protein, C-terminal domain AMD22_RS18345 PF13507 CobB/CobQ-like glutamine amidotransferase domain AMD22_RS18350 PF10411 Disulfide bond isomerase protein N-terminus AMD22_RS18350 PF13098 Thioredoxin-like domain AMD22_RS18355 PF00589 Phage integrase family AMD22_RS18355 PF02899 Phage integrase, N-terminal SAM-like domain AMD22_RS18360 PF06271 AMD22_RS18360 AMD22_RS18370 PF03739 AMD22_RS18370 AMD22_RS18375 PF03739 AMD22_RS18375 AMD22_RS18380 PF00883 Cytosol aminopeptidase family, catalytic domain AMD22_RS18380 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD22_RS18390 PF04364 DNA polymerase III chi subunit, HolC AMD22_RS18395 PF00133 tRNA synthetases class I (I, L, M and V) AMD22_RS18395 PF08264 Anticodon-binding domain of tRNA AMD22_RS18395 PF10458 Valyl tRNA synthetase tRNA binding arm AMD22_RS18400 PF00593 TonB dependent receptor AMD22_RS18400 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS18405 PF01464 Transglycosylase SLT domain AMD22_RS18405 PF14718 Soluble lytic murein transglycosylase L domain AMD22_RS18410 PF00544 Pectate lyase AMD22_RS18415 PF00583 Acetyltransferase (GNAT) family AMD22_RS18425 PF01066 CDP-alcohol phosphatidyltransferase AMD22_RS18430 PF13511 AMD22_RS18430 AMD22_RS18435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD22_RS18435 PF03129 Anticodon binding domain AMD22_RS18435 PF04073 Aminoacyl-tRNA editing domain AMD22_RS18440 PF00816 H-NS histone family AMD22_RS18445 PF06738 AMD22_RS18445 AMD22_RS18445 PF12821 AMD22_RS18445 AMD22_RS18450 PF02405 AMD22_RS18450 AMD22_RS18455 PF00005 ABC transporter AMD22_RS18460 PF02470 AMD22_RS18460 AMD22_RS18465 PF03886 Protein of unknown function (DUF330) AMD22_RS18470 PF13532 2OG-Fe(II) oxygenase superfamily AMD22_RS18475 PF01946 Thi4 family AMD22_RS18475 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AMD22_RS18480 PF05045 AMD22_RS18480 AMD22_RS18480 PF14307 AMD22_RS18480 AMD22_RS18485 PF01144 Coenzyme A transferase AMD22_RS18490 PF01144 Coenzyme A transferase AMD22_RS18495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD22_RS18495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD22_RS18495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD22_RS18495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD22_RS18500 PF00483 Nucleotidyl transferase AMD22_RS18500 PF01050 Mannose-6-phosphate isomerase AMD22_RS18505 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD22_RS18505 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD22_RS18505 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD22_RS18510 PF04321 RmlD substrate binding domain AMD22_RS18515 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD22_RS18520 PF00483 Nucleotidyl transferase AMD22_RS18525 PF16363 AMD22_RS18525 AMD22_RS18530 PF01012 Electron transfer flavoprotein domain AMD22_RS18535 PF00766 Electron transfer flavoprotein FAD-binding domain AMD22_RS18535 PF01012 Electron transfer flavoprotein domain AMD22_RS18540 PF03706 AMD22_RS18540 AMD22_RS18545 PF01040 UbiA prenyltransferase family AMD22_RS18550 PF01565 FAD binding domain AMD22_RS18555 PF00106 short chain dehydrogenase AMD22_RS18565 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS18570 PF01593 Flavin containing amine oxidoreductase AMD22_RS18575 PF04138 AMD22_RS18575 AMD22_RS18585 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AMD22_RS18595 PF00535 Glycosyl transferase family 2 AMD22_RS18605 PF00005 ABC transporter AMD22_RS18605 PF14524 Wzt C-terminal domain AMD22_RS18610 PF01061 AMD22_RS18610 AMD22_RS18615 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD22_RS18620 PF00291 Pyridoxal-phosphate dependent enzyme AMD22_RS18620 PF00571 CBS domain AMD22_RS18625 PF04325 Protein of unknown function (DUF465) AMD22_RS18635 PF14346 Domain of unknown function (DUF4398) AMD22_RS18640 PF00437 Type II/IV secretion system protein AMD22_RS18650 PF13410 Glutathione S-transferase, C-terminal domain AMD22_RS18650 PF13417 Glutathione S-transferase, N-terminal domain AMD22_RS18655 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD22_RS18660 PF00270 DEAD/DEAH box helicase AMD22_RS18660 PF00271 Helicase conserved C-terminal domain AMD22_RS18665 PF02225 PA domain AMD22_RS18670 PF00593 TonB dependent receptor AMD22_RS18670 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS18675 PF01242 6-pyruvoyl tetrahydropterin synthase AMD22_RS18680 PF09361 AMD22_RS18680 AMD22_RS18685 PF13500 AAA domain AMD22_RS18695 PF13185 GAF domain AMD22_RS18700 PF04994 TfoX C-terminal domain AMD22_RS18705 PF00756 Putative esterase AMD22_RS18710 PF00593 TonB dependent receptor AMD22_RS18710 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS18715 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS18720 PF00817 impB/mucB/samB family AMD22_RS18720 PF11799 impB/mucB/samB family C-terminal domain AMD22_RS18725 PF07977 FabA-like domain AMD22_RS18730 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD22_RS18730 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD22_RS18740 PF01432 Peptidase family M3 AMD22_RS18745 PF00291 Pyridoxal-phosphate dependent enzyme AMD22_RS18755 PF00394 Multicopper oxidase AMD22_RS18755 PF07731 Multicopper oxidase AMD22_RS18755 PF07732 Multicopper oxidase AMD22_RS18760 PF05275 AMD22_RS18760 AMD22_RS18765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD22_RS18775 PF01471 Putative peptidoglycan binding domain AMD22_RS18790 PF01380 SIS domain AMD22_RS18790 PF13522 Glutamine amidotransferase domain AMD22_RS18795 PF13437 HlyD family secretion protein AMD22_RS18795 PF13533 Biotin-lipoyl like AMD22_RS18800 PF00005 ABC transporter AMD22_RS18805 PF02687 AMD22_RS18805 AMD22_RS18805 PF12704 MacB-like periplasmic core domain AMD22_RS18810 PF02687 AMD22_RS18810 AMD22_RS18810 PF12704 MacB-like periplasmic core domain AMD22_RS18820 PF00072 Response regulator receiver domain AMD22_RS18820 PF00158 Sigma-54 interaction domain AMD22_RS18825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS18830 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS18830 PF12804 MobA-like NTP transferase domain AMD22_RS18830 PF14602 Hexapeptide repeat of succinyl-transferase AMD22_RS18835 PF04138 AMD22_RS18835 AMD22_RS18840 PF01817 Chorismate mutase type II AMD22_RS18845 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD22_RS18845 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD22_RS18850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD22_RS18850 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD22_RS18855 PF00231 ATP synthase AMD22_RS18860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD22_RS18860 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD22_RS18860 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD22_RS18865 PF00213 ATP synthase delta (OSCP) subunit AMD22_RS18870 PF00430 ATP synthase B/B' CF(0) AMD22_RS18875 PF00137 ATP synthase subunit C AMD22_RS18880 PF00119 ATP synthase A chain AMD22_RS18900 PF00364 Biotin-requiring enzyme AMD22_RS18900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD22_RS18900 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS18910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD22_RS18910 PF00364 Biotin-requiring enzyme AMD22_RS18910 PF02817 e3 binding domain AMD22_RS18915 PF11101 AMD22_RS18915 AMD22_RS18920 PF03167 Uracil DNA glycosylase superfamily AMD22_RS18925 PF03922 OmpW family AMD22_RS18950 PF03180 NLPA lipoprotein AMD22_RS18955 PF00528 Binding-protein-dependent transport system inner membrane component AMD22_RS18960 PF00005 ABC transporter AMD22_RS18960 PF09383 NIL domain AMD22_RS18965 PF00892 EamA-like transporter family AMD22_RS18970 PF04461 Protein of unknown function (DUF520) AMD22_RS18980 PF00072 Response regulator receiver domain AMD22_RS18980 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS18985 PF12146 Putative lysophospholipase AMD22_RS18990 PF07209 AMD22_RS18990 AMD22_RS19000 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS19005 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS19010 PF00849 RNA pseudouridylate synthase AMD22_RS19015 PF05175 Methyltransferase small domain AMD22_RS19025 PF07995 Glucose / Sorbosone dehydrogenase AMD22_RS19030 PF11607 Protein of unknown function (DUF3247) AMD22_RS19035 PF00072 Response regulator receiver domain AMD22_RS19035 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS19035 PF08448 PAS fold AMD22_RS19035 PF13188 PAS domain AMD22_RS19050 PF11454 AMD22_RS19050 AMD22_RS19055 PF00842 Alanine racemase, C-terminal domain AMD22_RS19055 PF01168 Alanine racemase, N-terminal domain AMD22_RS19060 PF01266 FAD dependent oxidoreductase AMD22_RS19065 PF01037 AsnC family AMD22_RS19065 PF13404 AsnC-type helix-turn-helix domain AMD22_RS19075 PF01641 SelR domain AMD22_RS19080 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AMD22_RS19085 PF01618 AMD22_RS19085 AMD22_RS19090 PF00691 OmpA family AMD22_RS19090 PF13677 AMD22_RS19090 AMD22_RS19100 PF13223 AMD22_RS19100 AMD22_RS19110 PF11730 AMD22_RS19110 AMD22_RS19115 PF01061 AMD22_RS19115 AMD22_RS19120 PF00005 ABC transporter AMD22_RS19125 PF00999 Sodium/hydrogen exchanger family AMD22_RS19130 PF02469 Fasciclin domain AMD22_RS19135 PF03167 Uracil DNA glycosylase superfamily AMD22_RS19135 PF13566 AMD22_RS19135 AMD22_RS19140 PF04055 Radical SAM superfamily AMD22_RS19145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD22_RS19150 PF07681 AMD22_RS19150 AMD22_RS19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS19155 PF03466 LysR substrate binding domain AMD22_RS19160 PF03358 NADPH-dependent FMN reductase AMD22_RS19165 PF00248 Aldo/keto reductase family AMD22_RS19170 PF00535 Glycosyl transferase family 2 AMD22_RS19175 PF01431 Peptidase family M13 AMD22_RS19175 PF05649 Peptidase family M13 AMD22_RS19180 PF09995 AMD22_RS19180 AMD22_RS19195 PF13520 Amino acid permease AMD22_RS19205 PF00072 Response regulator receiver domain AMD22_RS19205 PF04397 LytTr DNA-binding domain AMD22_RS19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS19210 PF06580 AMD22_RS19210 AMD22_RS19215 PF01266 FAD dependent oxidoreductase AMD22_RS19225 PF05974 Domain of unknown function (DUF892) AMD22_RS19230 PF05067 Manganese containing catalase AMD22_RS19250 PF01339 CheB methylesterase AMD22_RS19250 PF01739 CheR methyltransferase, SAM binding domain AMD22_RS19250 PF03705 CheR methyltransferase, all-alpha domain AMD22_RS19250 PF07536 AMD22_RS19250 AMD22_RS19250 PF08447 PAS fold AMD22_RS19250 PF13596 PAS domain AMD22_RS19255 PF00072 Response regulator receiver domain AMD22_RS19265 PF00072 Response regulator receiver domain AMD22_RS19265 PF00158 Sigma-54 interaction domain AMD22_RS19265 PF02954 Bacterial regulatory protein, Fis family AMD22_RS19275 PF01654 AMD22_RS19275 AMD22_RS19280 PF02322 AMD22_RS19280 AMD22_RS19295 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS19300 PF16363 AMD22_RS19300 AMD22_RS19305 PF13692 Glycosyl transferases group 1 AMD22_RS19310 PF03275 UDP-galactopyranose mutase AMD22_RS19310 PF13450 NAD(P)-binding Rossmann-like domain AMD22_RS19320 PF00005 ABC transporter AMD22_RS19320 PF00664 ABC transporter transmembrane region AMD22_RS19325 PF12244 AMD22_RS19325 AMD22_RS19330 PF13628 AMD22_RS19330 AMD22_RS19335 PF00107 Zinc-binding dehydrogenase AMD22_RS19335 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS19335 PF13823 Alcohol dehydrogenase GroES-associated AMD22_RS19345 PF03692 AMD22_RS19345 AMD22_RS19360 PF11828 AMD22_RS19360 AMD22_RS19375 PF11445 AMD22_RS19375 AMD22_RS19380 PF00593 TonB dependent receptor AMD22_RS19380 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS19385 PF12040 AMD22_RS19385 AMD22_RS19390 PF12040 AMD22_RS19390 AMD22_RS19390 PF12679 AMD22_RS19390 AMD22_RS19395 PF00005 ABC transporter AMD22_RS19400 PF00246 Zinc carboxypeptidase AMD22_RS19405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS19405 PF03466 LysR substrate binding domain AMD22_RS19410 PF01042 Endoribonuclease L-PSP AMD22_RS19420 PF01527 Transposase AMD22_RS19425 PF00665 Integrase core domain AMD22_RS19435 PF12849 PBP superfamily domain AMD22_RS19440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD22_RS19440 PF00672 HAMP domain AMD22_RS19445 PF01223 DNA/RNA non-specific endonuclease AMD22_RS19450 PF12697 Alpha/beta hydrolase family AMD22_RS19455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS19455 PF03466 LysR substrate binding domain AMD22_RS19460 PF02525 Flavodoxin-like fold AMD22_RS19465 PF03795 YCII-related domain AMD22_RS19475 PF07866 Protein of unknown function (DUF1653) AMD22_RS19500 PF00557 Metallopeptidase family M24 AMD22_RS19505 PF11903 AMD22_RS19505 AMD22_RS19520 PF00140 Sigma-70 factor, region 1 AMD22_RS19520 PF03979 Sigma-70 factor, region 1 AMD22_RS19520 PF04539 Sigma-70 region 3 AMD22_RS19520 PF04542 Sigma-70 region 2 AMD22_RS19520 PF04545 Sigma-70, region 4 AMD22_RS19520 PF04546 Sigma-70, non-essential region AMD22_RS19525 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD22_RS19530 PF03279 AMD22_RS19530 AMD22_RS19535 PF13420 Acetyltransferase (GNAT) domain AMD22_RS19545 PF00925 GTP cyclohydrolase II AMD22_RS19550 PF03703 AMD22_RS19550 AMD22_RS19555 PF03703 AMD22_RS19555 AMD22_RS19560 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD22_RS19565 PF00535 Glycosyl transferase family 2 AMD22_RS19570 PF04932 AMD22_RS19570 AMD22_RS19575 PF13231 AMD22_RS19575 AMD22_RS19580 PF01029 NusB family AMD22_RS19580 PF01189 NOL1/NOP2/sun family AMD22_RS19585 PF00551 Formyl transferase AMD22_RS19585 PF02911 Formyl transferase, C-terminal domain AMD22_RS19590 PF01327 Polypeptide deformylase AMD22_RS19595 PF01476 LysM domain AMD22_RS19600 PF02481 DNA recombination-mediator protein A AMD22_RS19605 PF04361 AMD22_RS19605 AMD22_RS19610 PF00114 Pilin (bacterial filament) AMD22_RS19610 PF14237 AMD22_RS19610 AMD22_RS19615 PF06271 AMD22_RS19615 AMD22_RS19615 PF14237 AMD22_RS19615 AMD22_RS19620 PF01131 DNA topoisomerase AMD22_RS19620 PF01751 Toprim domain AMD22_RS19620 PF13368 AMD22_RS19620 AMD22_RS19625 PF01300 Telomere recombination AMD22_RS19640 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS19650 PF01343 Peptidase family S49 AMD22_RS19655 PF01554 MatE AMD22_RS19660 PF12412 AMD22_RS19660 AMD22_RS19665 PF11304 AMD22_RS19665 AMD22_RS19675 PF00270 DEAD/DEAH box helicase AMD22_RS19675 PF00271 Helicase conserved C-terminal domain AMD22_RS19680 PF13410 Glutathione S-transferase, C-terminal domain AMD22_RS19680 PF13417 Glutathione S-transferase, N-terminal domain AMD22_RS19685 PF01936 NYN domain AMD22_RS19685 PF12872 OST-HTH/LOTUS domain AMD22_RS19695 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD22_RS19700 PF03458 AMD22_RS19700 AMD22_RS19705 PF00140 Sigma-70 factor, region 1 AMD22_RS19705 PF04542 Sigma-70 region 2 AMD22_RS19705 PF04545 Sigma-70, region 4 AMD22_RS19710 PF03167 Uracil DNA glycosylase superfamily AMD22_RS19715 PF00072 Response regulator receiver domain AMD22_RS19720 PF02687 AMD22_RS19720 AMD22_RS19725 PF00005 ABC transporter AMD22_RS19730 PF00270 DEAD/DEAH box helicase AMD22_RS19730 PF00271 Helicase conserved C-terminal domain AMD22_RS19730 PF12300 AMD22_RS19730 AMD22_RS19735 PF00085 Thioredoxin AMD22_RS19740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD22_RS19740 PF07497 Rho termination factor, RNA-binding domain AMD22_RS19740 PF07498 Rho termination factor, N-terminal domain AMD22_RS19745 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD22_RS19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS19750 PF03466 LysR substrate binding domain AMD22_RS19760 PF03971 Monomeric isocitrate dehydrogenase AMD22_RS19770 PF00270 DEAD/DEAH box helicase AMD22_RS19775 PF09704 CRISPR-associated protein (Cas_Cas5) AMD22_RS19785 PF05107 AMD22_RS19785 AMD22_RS19790 PF01930 Domain of unknown function DUF83 AMD22_RS19795 PF01867 CRISPR associated protein Cas1 AMD22_RS19800 PF09827 CRISPR associated protein Cas2 AMD22_RS19810 PF01476 LysM domain AMD22_RS19815 PF14489 QueF-like protein AMD22_RS19815 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD22_RS19820 PF01546 Peptidase family M20/M25/M40 AMD22_RS19820 PF07687 Peptidase dimerisation domain AMD22_RS19825 PF16576 AMD22_RS19825 AMD22_RS19830 PF00873 AcrB/AcrD/AcrF family AMD22_RS19835 PF00873 AcrB/AcrD/AcrF family AMD22_RS19840 PF07063 Domain of unknown function (DUF1338) AMD22_RS19855 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS19860 PF13202 EF hand AMD22_RS19865 PF13202 EF hand AMD22_RS19875 PF14255 AMD22_RS19875 AMD22_RS19880 PF01427 D-ala-D-ala dipeptidase AMD22_RS19885 PF01510 N-acetylmuramoyl-L-alanine amidase AMD22_RS19890 PF00877 NlpC/P60 family AMD22_RS19890 PF12913 SH3 domain of the SH3b1 type AMD22_RS19890 PF12914 SH3 domain of SH3b2 type AMD22_RS19895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD22_RS19895 PF13378 Enolase C-terminal domain-like AMD22_RS19905 PF13520 Amino acid permease AMD22_RS19920 PF05360 AMD22_RS19920 AMD22_RS19925 PF07995 Glucose / Sorbosone dehydrogenase AMD22_RS19930 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD22_RS19930 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD22_RS19930 PF14310 Fibronectin type III-like domain AMD22_RS19935 PF02152 Dihydroneopterin aldolase AMD22_RS19940 PF00814 Glycoprotease family AMD22_RS19945 PF01165 Ribosomal protein S21 AMD22_RS19950 PF09424 Yqey-like protein AMD22_RS19955 PF03631 AMD22_RS19955 AMD22_RS19960 PF01807 CHC2 zinc finger AMD22_RS19960 PF08275 DNA primase catalytic core, N-terminal domain AMD22_RS19960 PF08278 DNA primase DnaG DnaB-binding AMD22_RS19960 PF10410 DnaB-helicase binding domain of primase AMD22_RS19960 PF13155 Toprim-like AMD22_RS19965 PF13593 SBF-like CPA transporter family (DUF4137) AMD22_RS19970 PF13899 Thioredoxin-like AMD22_RS19975 PF01040 UbiA prenyltransferase family AMD22_RS19980 PF02628 AMD22_RS19980 AMD22_RS19990 PF02104 AMD22_RS19990 AMD22_RS19995 PF11137 AMD22_RS19995 AMD22_RS20000 PF00510 Cytochrome c oxidase subunit III AMD22_RS20005 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD22_RS20010 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD22_RS20015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD22_RS20015 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMD22_RS20020 PF10003 AMD22_RS20020 AMD22_RS20025 PF00171 Aldehyde dehydrogenase family AMD22_RS20025 PF01619 Proline dehydrogenase AMD22_RS20025 PF14850 DNA-binding domain of Proline dehydrogenase AMD22_RS20060 PF00579 tRNA synthetases class I (W and Y) AMD22_RS20065 PF01551 Peptidase family M23 AMD22_RS20065 PF04225 Opacity-associated protein A LysM-like domain AMD22_RS20070 PF03702 Uncharacterised protein family (UPF0075) AMD22_RS20080 PF07690 Major Facilitator Superfamily AMD22_RS20085 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS20090 PF00156 Phosphoribosyl transferase domain AMD22_RS20100 PF13614 AAA domain AMD22_RS20105 PF02195 ParB-like nuclease domain AMD22_RS20110 PF11731 AMD22_RS20110 AMD22_RS20115 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS20120 PF00535 Glycosyl transferase family 2 AMD22_RS20125 PF07578 Lipid A Biosynthesis N-terminal domain AMD22_RS20135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD22_RS20135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD22_RS20135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD22_RS20135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD22_RS20140 PF00692 dUTPase AMD22_RS20145 PF02441 Flavoprotein AMD22_RS20145 PF04127 DNA / pantothenate metabolism flavoprotein AMD22_RS20150 PF04002 RadC-like JAB domain AMD22_RS20155 PF00750 tRNA synthetases class I (R) AMD22_RS20155 PF03485 Arginyl tRNA synthetase N terminal domain AMD22_RS20155 PF05746 DALR anticodon binding domain AMD22_RS20160 PF05036 Sporulation related domain AMD22_RS20170 PF00106 short chain dehydrogenase AMD22_RS20175 PF01757 AMD22_RS20175 AMD22_RS20180 PF03033 Glycosyltransferase family 28 N-terminal domain AMD22_RS20185 PF00501 AMP-binding enzyme AMD22_RS20185 PF00550 Phosphopantetheine attachment site AMD22_RS20185 PF00668 Condensation domain AMD22_RS20185 PF00975 Thioesterase domain AMD22_RS20185 PF13193 AMP-binding enzyme C-terminal domain AMD22_RS20195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD22_RS20195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD22_RS20200 PF01564 Spermine/spermidine synthase AMD22_RS20205 PF09851 AMD22_RS20205 AMD22_RS20205 PF14470 Bacterial PH domain AMD22_RS20215 PF13505 Outer membrane protein beta-barrel domain AMD22_RS20225 PF02838 Glycosyl hydrolase family 20, domain 2 AMD22_RS20225 PF07555 beta-N-acetylglucosaminidase AMD22_RS20230 PF00543 Nitrogen regulatory protein P-II AMD22_RS20235 PF04380 AMD22_RS20235 AMD22_RS20240 PF01078 Magnesium chelatase, subunit ChlI AMD22_RS20240 PF13335 AMD22_RS20240 AMD22_RS20240 PF13541 Subunit ChlI of Mg-chelatase AMD22_RS20245 PF08212 Lipocalin-like domain AMD22_RS20255 PF00563 EAL domain AMD22_RS20255 PF12792 AMD22_RS20255 AMD22_RS20260 PF00487 AMD22_RS20260 AMD22_RS20265 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD22_RS20265 PF00175 Oxidoreductase NAD-binding domain AMD22_RS20265 PF00970 Oxidoreductase FAD-binding domain AMD22_RS20270 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS20285 PF01145 SPFH domain / Band 7 family AMD22_RS20290 PF01139 tRNA-splicing ligase RtcB AMD22_RS20300 PF00326 Prolyl oligopeptidase family AMD22_RS20305 PF11379 AMD22_RS20305 AMD22_RS20325 PF13628 AMD22_RS20325 AMD22_RS20330 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS20330 PF08338 Domain of unknown function (DUF1731) AMD22_RS20335 PF00072 Response regulator receiver domain AMD22_RS20335 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS20340 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS20340 PF00672 HAMP domain AMD22_RS20340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS20350 PF11769 AMD22_RS20350 AMD22_RS20360 PF13180 PDZ domain AMD22_RS20360 PF13365 Trypsin-like peptidase domain AMD22_RS20380 PF01594 AMD22_RS20380 AMD22_RS20385 PF13419 Haloacid dehalogenase-like hydrolase AMD22_RS20390 PF00883 Cytosol aminopeptidase family, catalytic domain AMD22_RS20400 PF04542 Sigma-70 region 2 AMD22_RS20400 PF08281 Sigma-70, region 4 AMD22_RS20405 PF00199 Catalase AMD22_RS20410 PF01292 Prokaryotic cytochrome b561 AMD22_RS20415 PF06283 Trehalose utilisation AMD22_RS20420 PF00072 Response regulator receiver domain AMD22_RS20420 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS20425 PF07730 Histidine kinase AMD22_RS20430 PF16576 AMD22_RS20430 AMD22_RS20435 PF00005 ABC transporter AMD22_RS20440 PF02687 AMD22_RS20440 AMD22_RS20440 PF12704 MacB-like periplasmic core domain AMD22_RS20445 PF02687 AMD22_RS20445 AMD22_RS20445 PF12704 MacB-like periplasmic core domain AMD22_RS20450 PF12697 Alpha/beta hydrolase family AMD22_RS20460 PF00892 EamA-like transporter family AMD22_RS20470 PF02225 PA domain AMD22_RS20470 PF04389 Peptidase family M28 AMD22_RS20475 PF00753 Metallo-beta-lactamase superfamily AMD22_RS20480 PF00579 tRNA synthetases class I (W and Y) AMD22_RS20480 PF07411 Domain of unknown function (DUF1508) AMD22_RS20485 PF05532 CsbD-like AMD22_RS20490 PF08085 AMD22_RS20490 AMD22_RS20495 PF08085 AMD22_RS20495 AMD22_RS20500 PF00491 Arginase family AMD22_RS20505 PF03259 Roadblock/LC7 domain AMD22_RS20525 PF02223 Thymidylate kinase AMD22_RS20535 PF05036 Sporulation related domain AMD22_RS20540 PF03309 Type III pantothenate kinase AMD22_RS20545 PF02237 Biotin protein ligase C terminal domain AMD22_RS20545 PF03099 Biotin/lipoate A/B protein ligase family AMD22_RS20545 PF08279 HTH domain AMD22_RS20555 PF06167 Glucose-regulated metallo-peptidase M90 AMD22_RS20560 PF07394 AMD22_RS20560 AMD22_RS20565 PF08811 AMD22_RS20565 AMD22_RS20570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS20575 PF00072 Response regulator receiver domain AMD22_RS20575 PF00486 Transcriptional regulatory protein, C terminal AMD22_RS20585 PF01207 Dihydrouridine synthase (Dus) AMD22_RS20595 PF12796 Ankyrin repeats (3 copies) AMD22_RS20605 PF13307 Helicase C-terminal domain AMD22_RS20620 PF01488 Shikimate / quinate 5-dehydrogenase AMD22_RS20620 PF08501 Shikimate dehydrogenase substrate binding domain AMD22_RS20625 PF07676 WD40-like Beta Propeller Repeat AMD22_RS20630 PF00175 Oxidoreductase NAD-binding domain AMD22_RS20630 PF00258 Flavodoxin AMD22_RS20630 PF03929 AMD22_RS20630 AMD22_RS20635 PF01223 DNA/RNA non-specific endonuclease AMD22_RS20640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS20640 PF03466 LysR substrate binding domain AMD22_RS20645 PF01370 NAD dependent epimerase/dehydratase family AMD22_RS20650 PF00490 Delta-aminolevulinic acid dehydratase AMD22_RS20670 PF05960 Bacterial protein of unknown function (DUF885) AMD22_RS20675 PF00326 Prolyl oligopeptidase family AMD22_RS20675 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD22_RS20680 PF00043 Glutathione S-transferase, C-terminal domain AMD22_RS20680 PF02798 Glutathione S-transferase, N-terminal domain AMD22_RS20690 PF00593 TonB dependent receptor AMD22_RS20690 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS20695 PF07277 AMD22_RS20695 AMD22_RS20700 PF13621 Cupin-like domain AMD22_RS20705 PF04820 Tryptophan halogenase AMD22_RS20710 PF03544 Gram-negative bacterial TonB protein C-terminal AMD22_RS20715 PF12679 AMD22_RS20715 AMD22_RS20720 PF00005 ABC transporter AMD22_RS20725 PF00561 alpha/beta hydrolase fold AMD22_RS20725 PF08386 TAP-like protein AMD22_RS20730 PF01381 Helix-turn-helix AMD22_RS20740 PF01229 Glycosyl hydrolases family 39 AMD22_RS20745 PF02583 Metal-sensitive transcriptional repressor AMD22_RS20750 PF01545 Cation efflux family AMD22_RS20760 PF00593 TonB dependent receptor AMD22_RS20760 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS20765 PF11287 AMD22_RS20765 AMD22_RS20770 PF01965 DJ-1/PfpI family AMD22_RS20770 PF12833 Helix-turn-helix domain AMD22_RS20775 PF00175 Oxidoreductase NAD-binding domain AMD22_RS20775 PF00970 Oxidoreductase FAD-binding domain AMD22_RS20780 PF00005 ABC transporter AMD22_RS20785 PF01061 AMD22_RS20785 AMD22_RS20790 PF12686 AMD22_RS20790 AMD22_RS20795 PF02558 Ketopantoate reductase PanE/ApbA AMD22_RS20795 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD22_RS20805 PF03061 Thioesterase superfamily AMD22_RS20815 PF00085 Thioredoxin AMD22_RS20820 PF00258 Flavodoxin AMD22_RS20825 PF00268 Ribonucleotide reductase, small chain AMD22_RS20830 PF00317 Ribonucleotide reductase, all-alpha domain AMD22_RS20830 PF02867 Ribonucleotide reductase, barrel domain AMD22_RS20835 PF04332 AMD22_RS20835 AMD22_RS20840 PF13302 Acetyltransferase (GNAT) domain AMD22_RS20840 PF13380 CoA binding domain AMD22_RS20840 PF13549 ATP-grasp domain AMD22_RS20840 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD22_RS20845 PF00571 CBS domain AMD22_RS20845 PF01769 Divalent cation transporter AMD22_RS20845 PF03448 MgtE intracellular N domain AMD22_RS20850 PF00194 Eukaryotic-type carbonic anhydrase AMD22_RS20855 PF00999 Sodium/hydrogen exchanger family AMD22_RS20855 PF02254 TrkA-N domain AMD22_RS20860 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD22_RS20860 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD22_RS20865 PF00723 Glycosyl hydrolases family 15 AMD22_RS20875 PF00023 Ankyrin repeat AMD22_RS20875 PF12796 Ankyrin repeats (3 copies) AMD22_RS20880 PF05166 YcgL domain AMD22_RS20885 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD22_RS20885 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD22_RS20890 PF13723 AMD22_RS20890 AMD22_RS20895 PF00535 Glycosyl transferase family 2 AMD22_RS20900 PF04820 Tryptophan halogenase AMD22_RS20900 PF13450 NAD(P)-binding Rossmann-like domain AMD22_RS20910 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS20925 PF03176 MMPL family AMD22_RS20945 PF03279 AMD22_RS20945 AMD22_RS20950 PF07977 FabA-like domain AMD22_RS20955 PF01553 Acyltransferase AMD22_RS20965 PF00550 Phosphopantetheine attachment site AMD22_RS20970 PF04820 Tryptophan halogenase AMD22_RS20985 PF00501 AMP-binding enzyme AMD22_RS20990 PF00326 Prolyl oligopeptidase family AMD22_RS20990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD22_RS21005 PF01218 Coproporphyrinogen III oxidase AMD22_RS21010 PF00476 DNA polymerase family A AMD22_RS21010 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD22_RS21010 PF01612 3'-5' exonuclease AMD22_RS21010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD22_RS21015 PF11191 Protein of unknown function (DUF2782) AMD22_RS21020 PF06812 AMD22_RS21020 AMD22_RS21025 PF05860 haemagglutination activity domain AMD22_RS21030 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD22_RS21030 PF08479 POTRA domain, ShlB-type AMD22_RS21040 PF00069 Protein kinase domain AMD22_RS21040 PF03781 Sulfatase-modifying factor enzyme 1 AMD22_RS21045 PF13672 Protein phosphatase 2C AMD22_RS21050 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) AMD22_RS21055 PF06744 AMD22_RS21055 AMD22_RS21055 PF06761 AMD22_RS21055 AMD22_RS21055 PF14331 AMD22_RS21055 AMD22_RS21060 PF00691 OmpA family AMD22_RS21060 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AMD22_RS21065 PF05936 AMD22_RS21065 AMD22_RS21070 PF00498 FHA domain AMD22_RS21080 PF05954 Phage late control gene D protein (GPD) AMD22_RS21085 PF00515 Tetratricopeptide repeat AMD22_RS21085 PF13489 Methyltransferase domain AMD22_RS21090 PF05488 PAAR motif AMD22_RS21095 PF00069 Protein kinase domain AMD22_RS21095 PF13374 Tetratricopeptide repeat AMD22_RS21095 PF13424 Tetratricopeptide repeat AMD22_RS21100 PF07638 ECF sigma factor AMD22_RS21105 PF04542 Sigma-70 region 2 AMD22_RS21105 PF08281 Sigma-70, region 4 AMD22_RS21110 PF04773 FecR protein AMD22_RS21110 PF16220 AMD22_RS21110 AMD22_RS21110 PF16344 AMD22_RS21110 AMD22_RS21115 PF00593 TonB dependent receptor AMD22_RS21115 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS21120 PF00328 Histidine phosphatase superfamily (branch 2) AMD22_RS21125 PF01419 Jacalin-like lectin domain AMD22_RS21145 PF01609 Transposase DDE domain AMD22_RS21150 PF00004 ATPase family associated with various cellular activities (AAA) AMD22_RS21150 PF07724 AAA domain (Cdc48 subfamily) AMD22_RS21150 PF10431 C-terminal, D2-small domain, of ClpB protein AMD22_RS21155 PF06996 AMD22_RS21155 AMD22_RS21160 PF05947 AMD22_RS21160 AMD22_RS21165 PF04965 Gene 25-like lysozyme AMD22_RS21170 PF07024 ImpE protein AMD22_RS21175 PF05638 Protein of unknown function (DUF796) AMD22_RS21180 PF05943 AMD22_RS21180 AMD22_RS21185 PF05591 AMD22_RS21185 AMD22_RS21190 PF12833 Helix-turn-helix domain AMD22_RS21195 PF00582 Universal stress protein family AMD22_RS21200 PF00132 Bacterial transferase hexapeptide (six repeats) AMD22_RS21200 PF12464 Maltose acetyltransferase AMD22_RS21205 PF00580 UvrD/REP helicase N-terminal domain AMD22_RS21205 PF13361 UvrD-like helicase C-terminal domain AMD22_RS21210 PF13454 FAD-NAD(P)-binding AMD22_RS21220 PF13091 PLD-like domain AMD22_RS21220 PF13396 AMD22_RS21220 AMD22_RS21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS21225 PF03466 LysR substrate binding domain AMD22_RS21230 PF03737 Demethylmenaquinone methyltransferase AMD22_RS21235 PF04303 PrpF protein AMD22_RS21240 PF04909 Amidohydrolase AMD22_RS21245 PF00471 Ribosomal protein L33 AMD22_RS21250 PF00830 Ribosomal L28 family AMD22_RS21255 PF00873 AcrB/AcrD/AcrF family AMD22_RS21260 PF16576 AMD22_RS21260 AMD22_RS21265 PF02321 Outer membrane efflux protein AMD22_RS21275 PF05960 Bacterial protein of unknown function (DUF885) AMD22_RS21280 PF02527 rRNA small subunit methyltransferase G AMD22_RS21285 PF09423 PhoD-like phosphatase AMD22_RS21285 PF16655 AMD22_RS21285 AMD22_RS21290 PF09423 PhoD-like phosphatase AMD22_RS21290 PF16655 AMD22_RS21290 AMD22_RS21295 PF01648 4'-phosphopantetheinyl transferase superfamily AMD22_RS21305 PF04226 AMD22_RS21305 AMD22_RS21310 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD22_RS21315 PF03372 Endonuclease/Exonuclease/phosphatase family AMD22_RS21320 PF00480 ROK family AMD22_RS21330 PF13616 PPIC-type PPIASE domain AMD22_RS21335 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD22_RS21340 PF00474 Sodium:solute symporter family AMD22_RS21345 PF04341 AMD22_RS21345 AMD22_RS21355 PF00501 AMP-binding enzyme AMD22_RS21355 PF13193 AMP-binding enzyme C-terminal domain AMD22_RS21355 PF16177 AMD22_RS21355 AMD22_RS21360 PF00072 Response regulator receiver domain AMD22_RS21360 PF00196 Bacterial regulatory proteins, luxR family AMD22_RS21365 PF14415 Domain of unknown function (DUF4424) AMD22_RS21375 PF00578 AhpC/TSA family AMD22_RS21385 PF04616 Glycosyl hydrolases family 43 AMD22_RS21395 PF00248 Aldo/keto reductase family AMD22_RS21400 PF04909 Amidohydrolase AMD22_RS21405 PF13561 Enoyl-(Acyl carrier protein) reductase AMD22_RS21410 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD22_RS21415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD22_RS21415 PF13378 Enolase C-terminal domain-like AMD22_RS21425 PF05336 Domain of unknown function (DUF718) AMD22_RS21430 PF07690 Major Facilitator Superfamily AMD22_RS21435 PF01614 Bacterial transcriptional regulator AMD22_RS21435 PF09339 IclR helix-turn-helix domain AMD22_RS21440 PF02659 AMD22_RS21440 AMD22_RS21445 PF00072 Response regulator receiver domain AMD22_RS21445 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS21445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS21445 PF12860 AMD22_RS21445 AMD22_RS21455 PF15979 AMD22_RS21455 AMD22_RS21460 PF06165 Glycosyltransferase family 36 AMD22_RS21460 PF17167 AMD22_RS21460 AMD22_RS21465 PF13347 MFS/sugar transport protein AMD22_RS21470 PF01202 Shikimate kinase AMD22_RS21475 PF13360 PQQ-like domain AMD22_RS21495 PF04357 AMD22_RS21495 AMD22_RS21500 PF01103 Surface antigen AMD22_RS21500 PF07244 Surface antigen variable number repeat AMD22_RS21515 PF01527 Transposase AMD22_RS21525 PF13333 AMD22_RS21525 AMD22_RS21530 PF00005 ABC transporter AMD22_RS21530 PF00664 ABC transporter transmembrane region AMD22_RS21535 PF02092 AMD22_RS21535 AMD22_RS21535 PF05746 DALR anticodon binding domain AMD22_RS21540 PF02091 Glycyl-tRNA synthetase alpha subunit AMD22_RS21545 PF00437 Type II/IV secretion system protein AMD22_RS21545 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD22_RS21555 PF00117 Glutamine amidotransferase class-I AMD22_RS21565 PF00902 Sec-independent protein translocase protein (TatC) AMD22_RS21570 PF02416 mttA/Hcf106 family AMD22_RS21575 PF02416 mttA/Hcf106 family AMD22_RS21580 PF04366 AMD22_RS21580 AMD22_RS21585 PF00762 Ferrochelatase AMD22_RS21590 PF00561 alpha/beta hydrolase fold AMD22_RS21600 PF01863 Protein of unknown function DUF45 AMD22_RS21605 PF04381 Putative exonuclease, RdgC AMD22_RS21610 PF01171 PP-loop family AMD22_RS21620 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS21620 PF13377 Periplasmic binding protein-like domain AMD22_RS21625 PF03648 Glycosyl hydrolase family 67 N-terminus AMD22_RS21625 PF07477 Glycosyl hydrolase family 67 C-terminus AMD22_RS21625 PF07488 Glycosyl hydrolase family 67 middle domain AMD22_RS21630 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD22_RS21630 PF03629 Domain of unknown function (DUF303) AMD22_RS21635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD22_RS21635 PF13378 Enolase C-terminal domain-like AMD22_RS21640 PF04616 Glycosyl hydrolases family 43 AMD22_RS21645 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD22_RS21645 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD22_RS21645 PF07691 PA14 domain AMD22_RS21645 PF14310 Fibronectin type III-like domain AMD22_RS21650 PF01232 Mannitol dehydrogenase Rossmann domain AMD22_RS21650 PF08125 Mannitol dehydrogenase C-terminal domain AMD22_RS21665 PF01344 Kelch motif AMD22_RS21665 PF13964 Kelch motif AMD22_RS21670 PF00440 Bacterial regulatory proteins, tetR family AMD22_RS21675 PF00171 Aldehyde dehydrogenase family AMD22_RS21695 PF00596 Class II Aldolase and Adducin N-terminal domain AMD22_RS21700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD22_RS21700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD22_RS21705 PF09694 AMD22_RS21705 AMD22_RS21710 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD22_RS21725 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD22_RS21730 PF00331 Glycosyl hydrolase family 10 AMD22_RS21735 PF00703 Glycosyl hydrolases family 2 AMD22_RS21735 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD22_RS21735 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD22_RS21735 PF16355 AMD22_RS21735 AMD22_RS21740 PF02614 Glucuronate isomerase AMD22_RS21745 PF00331 Glycosyl hydrolase family 10 AMD22_RS21760 PF00331 Glycosyl hydrolase family 10 AMD22_RS21765 PF07690 Major Facilitator Superfamily AMD22_RS21770 PF00593 TonB dependent receptor AMD22_RS21770 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS21775 PF13347 MFS/sugar transport protein AMD22_RS21780 PF04616 Glycosyl hydrolases family 43 AMD22_RS21785 PF08212 Lipocalin-like domain AMD22_RS21790 PF06877 Regulator of ribonuclease activity B AMD22_RS21810 PF04325 Protein of unknown function (DUF465) AMD22_RS21815 PF00107 Zinc-binding dehydrogenase AMD22_RS21815 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS21820 PF01553 Acyltransferase AMD22_RS21830 PF00356 Bacterial regulatory proteins, lacI family AMD22_RS21830 PF13377 Periplasmic binding protein-like domain AMD22_RS21835 PF13620 Carboxypeptidase regulatory-like domain AMD22_RS21850 PF04820 Tryptophan halogenase AMD22_RS21855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD22_RS21860 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD22_RS21865 PF04337 Protein of unknown function, DUF480 AMD22_RS21870 PF14094 AMD22_RS21870 AMD22_RS21875 PF13302 Acetyltransferase (GNAT) domain AMD22_RS21880 PF00580 UvrD/REP helicase N-terminal domain AMD22_RS21880 PF13361 UvrD-like helicase C-terminal domain AMD22_RS21885 PF00265 Thymidine kinase AMD22_RS21890 PF00512 His Kinase A (phospho-acceptor) domain AMD22_RS21890 PF01590 GAF domain AMD22_RS21890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD22_RS21895 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD22_RS21900 PF14315 AMD22_RS21900 AMD22_RS21905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD22_RS21905 PF06827 Zinc finger found in FPG and IleRS AMD22_RS21905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD22_RS21940 PF03594 AMD22_RS21940 AMD22_RS21945 PF00360 Phytochrome region AMD22_RS21945 PF01590 GAF domain AMD22_RS21945 PF08446 PAS fold AMD22_RS21945 PF08448 PAS fold AMD22_RS21950 PF01126 Heme oxygenase AMD22_RS21955 PF07690 Major Facilitator Superfamily AMD22_RS21960 PF01263 Aldose 1-epimerase AMD22_RS21960 PF01471 Putative peptidoglycan binding domain AMD22_RS21960 PF13406 Transglycosylase SLT domain AMD22_RS21975 PF01925 AMD22_RS21975 AMD22_RS21980 PF13555 P-loop containing region of AAA domain AMD22_RS21980 PF13558 Putative exonuclease SbcCD, C subunit AMD22_RS21985 PF13835 AMD22_RS21985 AMD22_RS21990 PF11855 AMD22_RS21990 AMD22_RS21995 PF01227 GTP cyclohydrolase I AMD22_RS22000 PF12802 MarR family AMD22_RS22005 PF07869 AMD22_RS22005 AMD22_RS22010 PF13437 HlyD family secretion protein AMD22_RS22010 PF13533 Biotin-lipoyl like AMD22_RS22015 PF02321 Outer membrane efflux protein AMD22_RS22020 PF04632 AMD22_RS22020 AMD22_RS22025 PF00083 Sugar (and other) transporter AMD22_RS22030 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD22_RS22035 PF13091 PLD-like domain AMD22_RS22050 PF05016 Plasmid stabilisation system protein AMD22_RS22055 PF03869 Arc-like DNA binding domain AMD22_RS22060 PF01850 PIN domain AMD22_RS22065 PF00756 Putative esterase AMD22_RS22070 PF09722 AMD22_RS22070 AMD22_RS22085 PF00849 RNA pseudouridylate synthase AMD22_RS22095 PF01527 Transposase AMD22_RS22105 PF13333 AMD22_RS22105 AMD22_RS22110 PF07080 Protein of unknown function (DUF1348) AMD22_RS22115 PF01609 Transposase DDE domain AMD22_RS22120 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD22_RS22120 PF00364 Biotin-requiring enzyme AMD22_RS22120 PF02626 Allophanate hydrolase subunit 2 AMD22_RS22120 PF02682 Allophanate hydrolase subunit 1 AMD22_RS22120 PF02785 Biotin carboxylase C-terminal domain AMD22_RS22120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD22_RS22125 PF01425 Amidase AMD22_RS22130 PF01609 Transposase DDE domain AMD22_RS22135 PF07080 Protein of unknown function (DUF1348) AMD22_RS22145 PF05299 M61 glycyl aminopeptidase AMD22_RS22150 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD22_RS22155 PF13538 UvrD-like helicase C-terminal domain AMD22_RS22155 PF13604 AAA domain AMD22_RS22160 PF00580 UvrD/REP helicase N-terminal domain AMD22_RS22160 PF12705 PD-(D/E)XK nuclease superfamily AMD22_RS22160 PF13361 UvrD-like helicase C-terminal domain AMD22_RS22165 PF04257 Exodeoxyribonuclease V, gamma subunit AMD22_RS22180 PF00005 ABC transporter AMD22_RS22185 PF02405 AMD22_RS22185 AMD22_RS22190 PF02470 AMD22_RS22190 AMD22_RS22195 PF05494 Toluene tolerance, Ttg2 AMD22_RS22200 PF13466 STAS domain AMD22_RS22205 PF04333 AMD22_RS22205 AMD22_RS22210 PF14534 Domain of unknown function (DUF4440) AMD22_RS22215 PF00255 Glutathione peroxidase AMD22_RS22225 PF02646 AMD22_RS22225 AMD22_RS22230 PF08240 Alcohol dehydrogenase GroES-like domain AMD22_RS22230 PF13602 Zinc-binding dehydrogenase AMD22_RS22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD22_RS22235 PF03466 LysR substrate binding domain AMD22_RS22245 PF13410 Glutathione S-transferase, C-terminal domain AMD22_RS22245 PF13417 Glutathione S-transferase, N-terminal domain AMD22_RS22255 PF13520 Amino acid permease AMD22_RS22260 PF07971 Glycosyl hydrolase family 92 AMD22_RS22265 PF10947 AMD22_RS22265 AMD22_RS22270 PF00990 GGDEF domain AMD22_RS22270 PF08448 PAS fold AMD22_RS22275 PF05651 AMD22_RS22275 AMD22_RS22275 PF13556 PucR C-terminal helix-turn-helix domain AMD22_RS22280 PF02595 Glycerate kinase family AMD22_RS22285 PF07690 Major Facilitator Superfamily AMD22_RS22290 PF01244 Membrane dipeptidase (Peptidase family M19) AMD22_RS22300 PF10672 S-adenosylmethionine-dependent methyltransferase AMD22_RS22305 PF03741 AMD22_RS22305 AMD22_RS22310 PF01694 Rhomboid family AMD22_RS22315 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD22_RS22320 PF00593 TonB dependent receptor AMD22_RS22320 PF07715 TonB-dependent Receptor Plug Domain AMD22_RS22325 PF01569 PAP2 superfamily AMD22_RS22330 PF01926 50S ribosome-binding GTPase AMD22_RS22330 PF10396 GTP-binding protein TrmE N-terminus AMD22_RS22330 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AMD22_RS22335 PF00656 Caspase domain AMD22_RS22335 PF01522 Polysaccharide deacetylase AMD22_RS22335 PF13424 Tetratricopeptide repeat AMD22_RS22345 PF02096 60Kd inner membrane protein AMD22_RS22345 PF14849 YidC periplasmic domain AMD22_RS22350 PF00825 Ribonuclease P AMD22_RS22355 PF00468 Ribosomal protein L34