AMD22_RS00065 SM00028 Tetratricopeptide repeats AMD22_RS00220 SM00028 Tetratricopeptide repeats AMD22_RS00500 SM00382 ATPases associated with a variety of cellular activities AMD22_RS00500 SM00760 Bacterial dnaA protein helix-turn-helix domain AMD22_RS00505 SM00480 DNA polymerase III beta subunit AMD22_RS00515 SM00387 Histidine kinase-like ATPases AMD22_RS00515 SM00433 TopoisomeraseII AMD22_RS00530 SM00028 Tetratricopeptide repeats AMD22_RS00565 SM00155 Phospholipase D. Active site motifs. AMD22_RS00580 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS00610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD22_RS00610 SM00245 tail specific protease AMD22_RS00650 SM00829 Enoylreductase AMD22_RS00775 SM00382 ATPases associated with a variety of cellular activities AMD22_RS00885 SM00487 DEAD-like helicases superfamily AMD22_RS00885 SM00490 helicase superfamily c-terminal domain AMD22_RS00905 SM00822 AMD22_RS00905 AMD22_RS00910 SM00822 AMD22_RS00910 AMD22_RS01165 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMD22_RS01190 SM00421 helix_turn_helix, Lux Regulon AMD22_RS01190 SM00448 cheY-homologous receiver domain AMD22_RS01210 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS01290 SM00642 Alpha-amylase domain AMD22_RS01295 SM00642 Alpha-amylase domain AMD22_RS01300 SM00642 Alpha-amylase domain AMD22_RS01350 SM00354 helix_turn _helix lactose operon repressor AMD22_RS01390 SM00344 helix_turn_helix ASNC type AMD22_RS01410 SM00382 ATPases associated with a variety of cellular activities AMD22_RS01425 SM00382 ATPases associated with a variety of cellular activities AMD22_RS01460 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS01490 SM00855 Phosphoglycerate mutase family AMD22_RS01495 SM00867 YceI-like domain AMD22_RS01500 SM00155 Phospholipase D. Active site motifs. AMD22_RS01510 SM00563 Phosphate acyltransferases AMD22_RS01525 SM00028 Tetratricopeptide repeats AMD22_RS01535 SM00829 Enoylreductase AMD22_RS01550 SM01230 AMD22_RS01550 AMD22_RS01555 SM00938 Nitrogen regulatory protein P-II AMD22_RS01565 SM00387 Histidine kinase-like ATPases AMD22_RS01565 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS01570 SM00382 ATPases associated with a variety of cellular activities AMD22_RS01570 SM00448 cheY-homologous receiver domain AMD22_RS01630 SM00450 Rhodanese Homology Domain AMD22_RS01655 SM00387 Histidine kinase-like ATPases AMD22_RS01655 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS01660 SM00382 ATPases associated with a variety of cellular activities AMD22_RS01660 SM00448 cheY-homologous receiver domain AMD22_RS01770 SM00563 Phosphate acyltransferases AMD22_RS01805 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS01830 SM00100 Cyclic nucleotide-monophosphate binding domain AMD22_RS01830 SM00267 diguanylate cyclase AMD22_RS01855 SM00878 Biotin carboxylase C-terminal domain AMD22_RS01880 SM00953 AMD22_RS01880 AMD22_RS01920 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMD22_RS01950 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS01985 SM00829 Enoylreductase AMD22_RS02015 SM00487 DEAD-like helicases superfamily AMD22_RS02015 SM00490 helicase superfamily c-terminal domain AMD22_RS02015 SM00847 Helicase associated domain (HA2) Add an annotation AMD22_RS02150 SM00422 helix_turn_helix, mercury resistance AMD22_RS02185 SM00448 cheY-homologous receiver domain AMD22_RS02185 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS02190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS02190 SM00387 Histidine kinase-like ATPases AMD22_RS02190 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS02335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD22_RS02340 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS02360 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS02390 SM00420 helix_turn_helix, Deoxyribose operon repressor AMD22_RS02390 SM01134 AMD22_RS02390 AMD22_RS02405 SM00882 Coenzyme A transferase AMD22_RS02410 SM00882 Coenzyme A transferase AMD22_RS02430 SM00998 Adenylosuccinate lyase C-terminus AMD22_RS02450 SM00346 helix_turn_helix isocitrate lyase regulation AMD22_RS02455 SM00090 RIO-like kinase AMD22_RS02470 SM01228 AMD22_RS02470 AMD22_RS02525 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS02525 SM00876 Biotin and Thiamin Synthesis associated domain AMD22_RS02545 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMD22_RS02640 SM00382 ATPases associated with a variety of cellular activities AMD22_RS02700 SM00267 diguanylate cyclase AMD22_RS02710 SM00642 Alpha-amylase domain AMD22_RS02715 SM00642 Alpha-amylase domain AMD22_RS02725 SM00642 Alpha-amylase domain AMD22_RS02735 SM00642 Alpha-amylase domain AMD22_RS02785 SM00822 AMD22_RS02785 AMD22_RS02795 SM00487 DEAD-like helicases superfamily AMD22_RS02795 SM00490 helicase superfamily c-terminal domain AMD22_RS02805 SM00326 Src homology 3 domains AMD22_RS02810 SM00861 Transketolase, pyrimidine binding domain AMD22_RS02820 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMD22_RS02840 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS02935 SM00271 DnaJ molecular chaperone homology domain AMD22_RS02955 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMD22_RS02975 SM00903 Flavin reductase like domain AMD22_RS02995 SM00100 Cyclic nucleotide-monophosphate binding domain AMD22_RS02995 SM00419 helix_turn_helix, cAMP Regulatory protein AMD22_RS03050 SM00387 Histidine kinase-like ATPases AMD22_RS03050 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS03050 SM00448 cheY-homologous receiver domain AMD22_RS03055 SM00052 Putative diguanylate phosphodiesterase AMD22_RS03055 SM00267 diguanylate cyclase AMD22_RS03055 SM00448 cheY-homologous receiver domain AMD22_RS03120 SM00563 Phosphate acyltransferases AMD22_RS03145 SM01209 AMD22_RS03145 AMD22_RS03145 SM01210 AMD22_RS03145 AMD22_RS03155 SM00798 AICARFT/IMPCHase bienzyme AMD22_RS03155 SM00851 MGS-like domain AMD22_RS03170 SM00195 Dual specificity phosphatase, catalytic domain AMD22_RS03190 SM00563 Phosphate acyltransferases AMD22_RS03215 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS03240 SM00878 Biotin carboxylase C-terminal domain AMD22_RS03270 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS03280 SM00234 in StAR and phosphatidylcholine transfer protein AMD22_RS03300 SM00883 Chaperonin 10 Kd subunit AMD22_RS03360 SM00944 Pro-kumamolisin, activation domain AMD22_RS03375 SM00867 YceI-like domain AMD22_RS03430 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD22_RS03440 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD22_RS03440 SM00895 AMD22_RS03440 AMD22_RS03460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS03460 SM00331 Sigma factor PP2C-like phosphatases AMD22_RS03500 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS03565 SM00267 diguanylate cyclase AMD22_RS03595 SM00062 Bacterial periplasmic substrate-binding proteins AMD22_RS03635 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD22_RS03635 SM01232 AMD22_RS03635 AMD22_RS03650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS03660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS03660 SM00091 PAS domain AMD22_RS03660 SM00267 diguanylate cyclase AMD22_RS03665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS03665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS03665 SM01049 AMD22_RS03665 AMD22_RS03670 SM00637 AMD22_RS03670 AMD22_RS03685 SM00267 diguanylate cyclase AMD22_RS03715 SM00448 cheY-homologous receiver domain AMD22_RS03715 SM00850 LytTr DNA-binding domain AMD22_RS03795 SM00382 ATPases associated with a variety of cellular activities AMD22_RS03795 SM01086 C-terminal, D2-small domain, of ClpB protein AMD22_RS03825 SM00267 diguanylate cyclase AMD22_RS03830 SM01263 AMD22_RS03830 AMD22_RS03850 SM00564 beta-propeller repeat AMD22_RS03855 SM00062 Bacterial periplasmic substrate-binding proteins AMD22_RS03855 SM00248 ankyrin repeats AMD22_RS03870 SM00829 Enoylreductase AMD22_RS03880 SM00382 ATPases associated with a variety of cellular activities AMD22_RS03890 SM00268 Actin AMD22_RS03915 SM00710 Parallel beta-helix repeats AMD22_RS03935 SM00936 Penicillin-binding protein 5, C-terminal domain AMD22_RS03955 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS03960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD22_RS03960 SM00245 tail specific protease AMD22_RS04015 SM01350 AMD22_RS04015 AMD22_RS04025 SM00749 bacterial OsmY and nodulation domain AMD22_RS04030 SM00387 Histidine kinase-like ATPases AMD22_RS04030 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS04035 SM00448 cheY-homologous receiver domain AMD22_RS04040 SM00387 Histidine kinase-like ATPases AMD22_RS04040 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS04040 SM00448 cheY-homologous receiver domain AMD22_RS04070 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD22_RS04095 SM00382 ATPases associated with a variety of cellular activities AMD22_RS04165 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD22_RS04165 SM00866 AMD22_RS04165 AMD22_RS04175 SM00354 helix_turn _helix lactose operon repressor AMD22_RS04240 SM00849 Metallo-beta-lactamase superfamily AMD22_RS04245 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS04255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS04255 SM00387 Histidine kinase-like ATPases AMD22_RS04255 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS04260 SM00448 cheY-homologous receiver domain AMD22_RS04260 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS04280 SM00829 Enoylreductase AMD22_RS04300 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD22_RS04320 SM00382 ATPases associated with a variety of cellular activities AMD22_RS04380 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD22_RS04410 SM00387 Histidine kinase-like ATPases AMD22_RS04410 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS04415 SM00448 cheY-homologous receiver domain AMD22_RS04415 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS04525 SM00842 Cell division protein FtsA AMD22_RS04530 SM00864 Tubulin/FtsZ family, GTPase domain AMD22_RS04530 SM00865 Tubulin/FtsZ family, C-terminal domain AMD22_RS04550 SM00957 SecA DEAD-like domain AMD22_RS04550 SM00958 SecA preprotein cross-linking domain AMD22_RS04575 SM00829 Enoylreductase AMD22_RS04580 SM00944 Pro-kumamolisin, activation domain AMD22_RS04595 SM00642 Alpha-amylase domain AMD22_RS04630 SM00996 S-adenosyl-L-homocysteine hydrolase AMD22_RS04630 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD22_RS04745 SM00382 ATPases associated with a variety of cellular activities AMD22_RS04765 SM00382 ATPases associated with a variety of cellular activities AMD22_RS04775 SM00448 cheY-homologous receiver domain AMD22_RS04775 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS04780 SM00387 Histidine kinase-like ATPases AMD22_RS04780 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS04830 SM00382 ATPases associated with a variety of cellular activities AMD22_RS04840 SM00382 ATPases associated with a variety of cellular activities AMD22_RS04900 SM00382 ATPases associated with a variety of cellular activities AMD22_RS04915 SM00650 Ribosomal RNA adenine dimethylases AMD22_RS04980 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD22_RS04980 SM00895 AMD22_RS04980 AMD22_RS05015 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS05090 SM00448 cheY-homologous receiver domain AMD22_RS05095 SM00387 Histidine kinase-like ATPases AMD22_RS05095 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS05095 SM00448 cheY-homologous receiver domain AMD22_RS05100 SM00421 helix_turn_helix, Lux Regulon AMD22_RS05165 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD22_RS05165 SM00475 5'-3' exonuclease AMD22_RS05195 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMD22_RS05195 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMD22_RS05310 SM00852 Probable molybdopterin binding domain AMD22_RS05315 SM00028 Tetratricopeptide repeats AMD22_RS05320 SM00937 AMD22_RS05320 AMD22_RS05330 SM00028 Tetratricopeptide repeats AMD22_RS05350 SM01400 AMD22_RS05350 AMD22_RS05400 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMD22_RS05400 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD22_RS05405 SM00649 Ribosomal protein L11/L12 AMD22_RS05430 SM00663 RNA polymerase I subunit A N-terminus AMD22_RS05445 SM00838 Elongation factor G C-terminus AMD22_RS05445 SM00889 Elongation factor G, domain IV AMD22_RS05455 SM01403 AMD22_RS05455 AMD22_RS05475 SM01382 AMD22_RS05475 AMD22_RS05475 SM01383 AMD22_RS05475 AMD22_RS05490 SM00322 K homology RNA-binding domain AMD22_RS05510 SM01374 AMD22_RS05510 AMD22_RS05515 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD22_RS05575 SM00363 S4 RNA-binding domain AMD22_RS05575 SM01390 AMD22_RS05575 AMD22_RS05580 SM00662 RNA polymerases D AMD22_RS05625 SM00838 Elongation factor G C-terminus AMD22_RS05655 SM00829 Enoylreductase AMD22_RS05700 SM00382 ATPases associated with a variety of cellular activities AMD22_RS05710 SM00829 Enoylreductase AMD22_RS05740 SM00855 Phosphoglycerate mutase family AMD22_RS05790 SM00014 Acid phosphatase homologues AMD22_RS05810 SM00091 PAS domain AMD22_RS05810 SM00387 Histidine kinase-like ATPases AMD22_RS05810 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS05815 SM00448 cheY-homologous receiver domain AMD22_RS05815 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS05835 SM01329 AMD22_RS05835 AMD22_RS05980 SM00387 Histidine kinase-like ATPases AMD22_RS06000 SM00382 ATPases associated with a variety of cellular activities AMD22_RS06000 SM00994 ClpX C4-type zinc finger AMD22_RS06000 SM01086 C-terminal, D2-small domain, of ClpB protein AMD22_RS06005 SM00382 ATPases associated with a variety of cellular activities AMD22_RS06005 SM00464 Found in ATP-dependent protease La (LON) AMD22_RS06010 SM00411 bacterial (prokaryotic) histone like domain AMD22_RS06035 SM00257 Lysin motif AMD22_RS06040 SM00849 Metallo-beta-lactamase superfamily AMD22_RS06055 SM00479 AMD22_RS06055 AMD22_RS06060 SM00331 Sigma factor PP2C-like phosphatases AMD22_RS06060 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD22_RS06085 SM00849 Metallo-beta-lactamase superfamily AMD22_RS06090 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS06160 SM00382 ATPases associated with a variety of cellular activities AMD22_RS06170 SM00493 AMD22_RS06170 AMD22_RS06195 SM00382 ATPases associated with a variety of cellular activities AMD22_RS06240 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD22_RS06245 SM00822 AMD22_RS06245 AMD22_RS06255 SM00825 Beta-ketoacyl synthase AMD22_RS06290 SM00382 ATPases associated with a variety of cellular activities AMD22_RS06330 SM01359 AMD22_RS06330 AMD22_RS06330 SM01360 AMD22_RS06330 AMD22_RS06365 SM00271 DnaJ molecular chaperone homology domain AMD22_RS06370 SM00448 cheY-homologous receiver domain AMD22_RS06375 SM00244 prohibitin homologues AMD22_RS06380 SM00244 prohibitin homologues AMD22_RS06385 SM01321 AMD22_RS06385 AMD22_RS06390 SM00788 Adenylosuccinate synthetase AMD22_RS06405 SM00822 AMD22_RS06405 AMD22_RS06460 SM00220 Serine/Threonine protein kinases, catalytic domain AMD22_RS06475 SM00855 Phosphoglycerate mutase family AMD22_RS06530 SM00052 Putative diguanylate phosphodiesterase AMD22_RS06535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD22_RS06545 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD22_RS06550 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD22_RS06565 SM00974 AMD22_RS06565 AMD22_RS06585 SM00966 SpoVT / AbrB like domain AMD22_RS06605 SM00481 DNA polymerase alpha chain like domain AMD22_RS06615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD22_RS06650 SM00091 PAS domain AMD22_RS06650 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS06665 SM01060 AMD22_RS06665 AMD22_RS06715 SM00448 cheY-homologous receiver domain AMD22_RS06715 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS06720 SM00387 Histidine kinase-like ATPases AMD22_RS06720 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS06760 SM00421 helix_turn_helix, Lux Regulon AMD22_RS06760 SM00448 cheY-homologous receiver domain AMD22_RS06775 SM00478 endonuclease III AMD22_RS06795 SM00244 prohibitin homologues AMD22_RS06880 SM00904 Riboflavin kinase AMD22_RS06925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD22_RS06930 SM00382 ATPases associated with a variety of cellular activities AMD22_RS06940 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS06945 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS06980 SM00387 Histidine kinase-like ATPases AMD22_RS06980 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS06985 SM00387 Histidine kinase-like ATPases AMD22_RS06985 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS06985 SM00448 cheY-homologous receiver domain AMD22_RS07010 SM00387 Histidine kinase-like ATPases AMD22_RS07010 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS07010 SM00448 cheY-homologous receiver domain AMD22_RS07020 SM00138 Methyltransferase, chemotaxis proteins AMD22_RS07025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS07025 SM00387 Histidine kinase-like ATPases AMD22_RS07025 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS07025 SM00448 cheY-homologous receiver domain AMD22_RS07030 SM00091 PAS domain AMD22_RS07030 SM00387 Histidine kinase-like ATPases AMD22_RS07030 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS07035 SM00448 cheY-homologous receiver domain AMD22_RS07045 SM00813 Alpha-L-arabinofuranosidase C-terminus AMD22_RS07065 SM00382 ATPases associated with a variety of cellular activities AMD22_RS07065 SM00962 SRP54-type protein, GTPase domain AMD22_RS07065 SM00963 SRP54-type protein, helical bundle domain AMD22_RS07135 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMD22_RS07135 SM00534 ATPase domain of DNA mismatch repair MUTS family AMD22_RS07155 SM00812 Alpha-L-fucosidase AMD22_RS07180 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS07230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD22_RS07235 SM00838 Elongation factor G C-terminus AMD22_RS07250 SM00358 Double-stranded RNA binding motif AMD22_RS07250 SM00535 Ribonuclease III family AMD22_RS07265 SM00448 cheY-homologous receiver domain AMD22_RS07275 SM01118 AMD22_RS07275 AMD22_RS07310 SM00357 Cold shock protein domain AMD22_RS07325 SM00487 DEAD-like helicases superfamily AMD22_RS07325 SM00490 helicase superfamily c-terminal domain AMD22_RS07355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS07355 SM00267 diguanylate cyclase AMD22_RS07375 SM00869 Autotransporter beta-domain AMD22_RS07380 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD22_RS07385 SM00671 Sel1-like repeats. AMD22_RS07385 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD22_RS07585 SM00382 ATPases associated with a variety of cellular activities AMD22_RS07670 SM00481 DNA polymerase alpha chain like domain AMD22_RS07710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD22_RS07740 SM00267 diguanylate cyclase AMD22_RS07765 SM00972 Spore Coat Protein U domain AMD22_RS07780 SM00972 Spore Coat Protein U domain AMD22_RS07790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD22_RS07810 SM01172 AMD22_RS07810 AMD22_RS07815 SM00710 Parallel beta-helix repeats AMD22_RS07815 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AMD22_RS07850 SM00434 DNA Topoisomerase IV AMD22_RS07855 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS07860 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS07885 SM01217 AMD22_RS07885 AMD22_RS07890 SM00631 AMD22_RS07890 AMD22_RS07920 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS07940 SM00382 ATPases associated with a variety of cellular activities AMD22_RS07955 SM00947 Carbonic anhydrase AMD22_RS07970 SM00357 Cold shock protein domain AMD22_RS08085 SM00267 diguanylate cyclase AMD22_RS08095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS08095 SM00267 diguanylate cyclase AMD22_RS08110 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS08125 SM00528 Domain in histone-like proteins of HNS family AMD22_RS08150 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS08245 SM00271 DnaJ molecular chaperone homology domain AMD22_RS08285 SM00382 ATPases associated with a variety of cellular activities AMD22_RS08310 SM00861 Transketolase, pyrimidine binding domain AMD22_RS08320 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD22_RS08340 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS08340 SM01091 Transporter associated domain AMD22_RS08370 SM00382 ATPases associated with a variety of cellular activities AMD22_RS08375 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD22_RS08390 SM00984 UDP binding domain AMD22_RS08410 SM00354 helix_turn _helix lactose operon repressor AMD22_RS08430 SM01018 B12 binding domain AMD22_RS08440 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMD22_RS08460 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS08460 SM00357 Cold shock protein domain AMD22_RS08460 SM00955 AMD22_RS08460 AMD22_RS08470 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD22_RS08475 SM00267 diguanylate cyclase AMD22_RS08480 SM00479 AMD22_RS08480 AMD22_RS08495 SM00382 ATPases associated with a variety of cellular activities AMD22_RS08530 SM00947 Carbonic anhydrase AMD22_RS08540 SM00478 endonuclease III AMD22_RS08565 SM00450 Rhodanese Homology Domain AMD22_RS08575 SM00644 AMD22_RS08575 AMD22_RS08595 SM00382 ATPases associated with a variety of cellular activities AMD22_RS08600 SM00981 AMD22_RS08600 AMD22_RS08630 SM00479 AMD22_RS08630 AMD22_RS08655 SM00947 Carbonic anhydrase AMD22_RS08700 SM00421 helix_turn_helix, Lux Regulon AMD22_RS08700 SM00448 cheY-homologous receiver domain AMD22_RS08760 SM00968 SMC proteins Flexible Hinge Domain AMD22_RS08765 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMD22_RS08780 SM00292 breast cancer carboxy-terminal domain AMD22_RS08780 SM00532 Ligase N family AMD22_RS08800 SM00434 DNA Topoisomerase IV AMD22_RS08805 SM00564 beta-propeller repeat AMD22_RS08845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD22_RS08845 SM00866 AMD22_RS08845 AMD22_RS08870 SM00240 Forkhead associated domain AMD22_RS08890 SM00830 Chorismate mutase type II AMD22_RS08935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS08935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS08945 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS08960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS08960 SM00091 PAS domain AMD22_RS08960 SM00387 Histidine kinase-like ATPases AMD22_RS08960 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS08960 SM00448 cheY-homologous receiver domain AMD22_RS08965 SM00448 cheY-homologous receiver domain AMD22_RS08970 SM00382 ATPases associated with a variety of cellular activities AMD22_RS08975 SM00091 PAS domain AMD22_RS08975 SM00387 Histidine kinase-like ATPases AMD22_RS08975 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS08975 SM00448 cheY-homologous receiver domain AMD22_RS09130 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS09140 SM00382 ATPases associated with a variety of cellular activities AMD22_RS09165 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS09165 SM01091 Transporter associated domain AMD22_RS09190 SM00387 Histidine kinase-like ATPases AMD22_RS09190 SM00433 TopoisomeraseII AMD22_RS09215 SM01192 AMD22_RS09215 AMD22_RS09215 SM01193 AMD22_RS09215 AMD22_RS09240 SM00463 Small MutS-related domain AMD22_RS09260 SM00257 Lysin motif AMD22_RS09270 SM01103 AMD22_RS09270 AMD22_RS09280 SM00382 ATPases associated with a variety of cellular activities AMD22_RS09320 SM00382 ATPases associated with a variety of cellular activities AMD22_RS09330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD22_RS09345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS09345 SM00091 PAS domain AMD22_RS09345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS09400 SM00670 Large family of predicted nucleotide-binding domains AMD22_RS09420 SM01130 AMD22_RS09420 AMD22_RS09445 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD22_RS09490 SM00758 AMD22_RS09490 AMD22_RS09520 SM00646 AMD22_RS09520 AMD22_RS09590 SM00052 Putative diguanylate phosphodiesterase AMD22_RS09590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS09590 SM00267 diguanylate cyclase AMD22_RS09600 SM00448 cheY-homologous receiver domain AMD22_RS09605 SM00387 Histidine kinase-like ATPases AMD22_RS09615 SM00014 Acid phosphatase homologues AMD22_RS09690 SM00912 haemagglutination activity domain AMD22_RS09735 SM00100 Cyclic nucleotide-monophosphate binding domain AMD22_RS09735 SM00419 helix_turn_helix, cAMP Regulatory protein AMD22_RS09810 SM01007 Class II Aldolase and Adducin N-terminal domain AMD22_RS09855 SM00841 Elongation factor P, C-terminal AMD22_RS09855 SM01185 AMD22_RS09855 AMD22_RS09860 SM00822 AMD22_RS09860 AMD22_RS09880 SM00899 AMD22_RS09880 AMD22_RS09915 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMD22_RS09925 SM00851 MGS-like domain AMD22_RS09925 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD22_RS09985 SM00850 LytTr DNA-binding domain AMD22_RS09990 SM00937 AMD22_RS09990 AMD22_RS10000 SM00448 cheY-homologous receiver domain AMD22_RS10000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD22_RS10005 SM00073 Histidine Phosphotransfer domain AMD22_RS10005 SM00387 Histidine kinase-like ATPases AMD22_RS10005 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS10005 SM00448 cheY-homologous receiver domain AMD22_RS10030 SM00966 SpoVT / AbrB like domain AMD22_RS10050 SM00052 Putative diguanylate phosphodiesterase AMD22_RS10050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS10050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS10050 SM00091 PAS domain AMD22_RS10050 SM00267 diguanylate cyclase AMD22_RS10055 SM00448 cheY-homologous receiver domain AMD22_RS10065 SM00138 Methyltransferase, chemotaxis proteins AMD22_RS10070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10125 SM01049 AMD22_RS10125 AMD22_RS10135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS10140 SM00073 Histidine Phosphotransfer domain AMD22_RS10140 SM00260 Two component signalling adaptor domain AMD22_RS10140 SM00387 Histidine kinase-like ATPases AMD22_RS10140 SM01231 AMD22_RS10140 AMD22_RS10145 SM00448 cheY-homologous receiver domain AMD22_RS10155 SM00260 Two component signalling adaptor domain AMD22_RS10185 SM00220 Serine/Threonine protein kinases, catalytic domain AMD22_RS10245 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS10270 SM00073 Histidine Phosphotransfer domain AMD22_RS10270 SM00260 Two component signalling adaptor domain AMD22_RS10270 SM00387 Histidine kinase-like ATPases AMD22_RS10270 SM01231 AMD22_RS10270 AMD22_RS10280 SM00448 cheY-homologous receiver domain AMD22_RS10295 SM00382 ATPases associated with a variety of cellular activities AMD22_RS10295 SM00962 SRP54-type protein, GTPase domain AMD22_RS10310 SM00052 Putative diguanylate phosphodiesterase AMD22_RS10310 SM00267 diguanylate cyclase AMD22_RS10315 SM00267 diguanylate cyclase AMD22_RS10325 SM00267 diguanylate cyclase AMD22_RS10375 SM00382 ATPases associated with a variety of cellular activities AMD22_RS10425 SM00822 AMD22_RS10425 AMD22_RS10450 SM00382 ATPases associated with a variety of cellular activities AMD22_RS10455 SM00448 cheY-homologous receiver domain AMD22_RS10465 SM00421 helix_turn_helix, Lux Regulon AMD22_RS10465 SM00448 cheY-homologous receiver domain AMD22_RS10505 SM00047 Lysozyme subfamily 2 AMD22_RS10550 SM00260 Two component signalling adaptor domain AMD22_RS10550 SM00448 cheY-homologous receiver domain AMD22_RS10555 SM00858 AMD22_RS10555 AMD22_RS10570 SM00387 Histidine kinase-like ATPases AMD22_RS10575 SM00052 Putative diguanylate phosphodiesterase AMD22_RS10575 SM00267 diguanylate cyclase AMD22_RS10575 SM00448 cheY-homologous receiver domain AMD22_RS10580 SM00091 PAS domain AMD22_RS10580 SM00387 Histidine kinase-like ATPases AMD22_RS10585 SM00052 Putative diguanylate phosphodiesterase AMD22_RS10585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS10585 SM00091 PAS domain AMD22_RS10585 SM00267 diguanylate cyclase AMD22_RS10595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS10620 SM00382 ATPases associated with a variety of cellular activities AMD22_RS10620 SM01086 C-terminal, D2-small domain, of ClpB protein AMD22_RS10625 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS10645 SM00382 ATPases associated with a variety of cellular activities AMD22_RS10645 SM00843 AMD22_RS10645 AMD22_RS10665 SM00382 ATPases associated with a variety of cellular activities AMD22_RS10695 SM00562 AMD22_RS10695 AMD22_RS10705 SM00028 Tetratricopeptide repeats AMD22_RS10720 SM00564 beta-propeller repeat AMD22_RS10725 SM00382 ATPases associated with a variety of cellular activities AMD22_RS10730 SM00852 Probable molybdopterin binding domain AMD22_RS10735 SM00450 Rhodanese Homology Domain AMD22_RS10780 SM00852 Probable molybdopterin binding domain AMD22_RS10805 SM00529 Helix-turn-helix diphteria tox regulatory element AMD22_RS10815 SM00479 AMD22_RS10815 AMD22_RS10885 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS10885 SM00732 Likely ribonuclease with RNase H fold. AMD22_RS10890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS10890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS10890 SM00091 PAS domain AMD22_RS10890 SM00387 Histidine kinase-like ATPases AMD22_RS10890 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS10890 SM00448 cheY-homologous receiver domain AMD22_RS10895 SM00448 cheY-homologous receiver domain AMD22_RS10980 SM00382 ATPases associated with a variety of cellular activities AMD22_RS11030 SM00382 ATPases associated with a variety of cellular activities AMD22_RS11040 SM00849 Metallo-beta-lactamase superfamily AMD22_RS11055 SM00382 ATPases associated with a variety of cellular activities AMD22_RS11070 SM00226 Low molecular weight phosphatase family AMD22_RS11080 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD22_RS11080 SM00465 GIY-YIG type nucleases (URI domain) AMD22_RS11110 SM00823 Phosphopantetheine attachment site AMD22_RS11140 SM00984 UDP binding domain AMD22_RS11160 SM00450 Rhodanese Homology Domain AMD22_RS11165 SM00421 helix_turn_helix, Lux Regulon AMD22_RS11165 SM00448 cheY-homologous receiver domain AMD22_RS11170 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS11175 SM00363 S4 RNA-binding domain AMD22_RS11215 SM01034 Sensors of blue-light using FAD AMD22_RS11325 SM00448 cheY-homologous receiver domain AMD22_RS11325 SM00850 LytTr DNA-binding domain AMD22_RS11345 SM00869 Autotransporter beta-domain AMD22_RS11365 SM00387 Histidine kinase-like ATPases AMD22_RS11365 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS11370 SM00421 helix_turn_helix, Lux Regulon AMD22_RS11370 SM00448 cheY-homologous receiver domain AMD22_RS11375 SM00869 Autotransporter beta-domain AMD22_RS11380 SM00052 Putative diguanylate phosphodiesterase AMD22_RS11405 SM00448 cheY-homologous receiver domain AMD22_RS11450 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS11455 SM00387 Histidine kinase-like ATPases AMD22_RS11460 SM00421 helix_turn_helix, Lux Regulon AMD22_RS11460 SM00448 cheY-homologous receiver domain AMD22_RS11465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS11505 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS11570 SM00966 SpoVT / AbrB like domain AMD22_RS11615 SM00736 Dystroglycan-type cadherin-like domains. AMD22_RS11640 SM00382 ATPases associated with a variety of cellular activities AMD22_RS11810 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS11850 SM00487 DEAD-like helicases superfamily AMD22_RS12105 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS12105 SM01240 AMD22_RS12105 AMD22_RS12130 SM00822 AMD22_RS12130 AMD22_RS12140 SM00028 Tetratricopeptide repeats AMD22_RS12150 SM00411 bacterial (prokaryotic) histone like domain AMD22_RS12155 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS12230 SM00354 helix_turn _helix lactose operon repressor AMD22_RS12255 SM00363 S4 RNA-binding domain AMD22_RS12280 SM00382 ATPases associated with a variety of cellular activities AMD22_RS12330 SM00357 Cold shock protein domain AMD22_RS12335 SM00382 ATPases associated with a variety of cellular activities AMD22_RS12340 SM00382 ATPases associated with a variety of cellular activities AMD22_RS12370 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD22_RS12380 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD22_RS12395 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD22_RS12435 SM00840 AMD22_RS12435 AMD22_RS12460 SM01234 AMD22_RS12460 AMD22_RS12500 SM00849 Metallo-beta-lactamase superfamily AMD22_RS12555 SM00841 Elongation factor P, C-terminal AMD22_RS12555 SM01185 AMD22_RS12555 AMD22_RS12565 SM00052 Putative diguanylate phosphodiesterase AMD22_RS12565 SM00267 diguanylate cyclase AMD22_RS12565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS12600 SM00382 ATPases associated with a variety of cellular activities AMD22_RS12605 SM00487 DEAD-like helicases superfamily AMD22_RS12605 SM00490 helicase superfamily c-terminal domain AMD22_RS12630 SM00357 Cold shock protein domain AMD22_RS12635 SM01322 AMD22_RS12635 AMD22_RS12645 SM00052 Putative diguanylate phosphodiesterase AMD22_RS12645 SM00267 diguanylate cyclase AMD22_RS12660 SM00822 AMD22_RS12660 AMD22_RS12680 SM00853 MutL C terminal dimerisation domain AMD22_RS12680 SM01340 AMD22_RS12680 AMD22_RS12685 SM00646 AMD22_RS12685 AMD22_RS12720 SM00474 3'-5' exonuclease AMD22_RS12735 SM00528 Domain in histone-like proteins of HNS family AMD22_RS12820 SM00857 Resolvase, N terminal domain AMD22_RS12890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS12890 SM00267 diguanylate cyclase AMD22_RS12895 SM00260 Two component signalling adaptor domain AMD22_RS12900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS12900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS12910 SM00487 DEAD-like helicases superfamily AMD22_RS12910 SM00490 helicase superfamily c-terminal domain AMD22_RS12965 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS12990 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS12990 SM01091 Transporter associated domain AMD22_RS13025 SM00382 ATPases associated with a variety of cellular activities AMD22_RS13055 SM01230 AMD22_RS13055 AMD22_RS13065 SM01230 AMD22_RS13065 AMD22_RS13075 SM00267 diguanylate cyclase AMD22_RS13075 SM00448 cheY-homologous receiver domain AMD22_RS13125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS13125 SM00091 PAS domain AMD22_RS13125 SM00387 Histidine kinase-like ATPases AMD22_RS13125 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS13125 SM00448 cheY-homologous receiver domain AMD22_RS13125 SM01079 AMD22_RS13125 AMD22_RS13130 SM00448 cheY-homologous receiver domain AMD22_RS13130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD22_RS13160 SM00354 helix_turn _helix lactose operon repressor AMD22_RS13220 SM01323 AMD22_RS13220 AMD22_RS13235 SM00344 helix_turn_helix ASNC type AMD22_RS13315 SM00387 Histidine kinase-like ATPases AMD22_RS13360 SM00944 Pro-kumamolisin, activation domain AMD22_RS13410 SM01130 AMD22_RS13410 AMD22_RS13435 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS13440 SM00382 ATPases associated with a variety of cellular activities AMD22_RS13440 SM00962 SRP54-type protein, GTPase domain AMD22_RS13440 SM00963 SRP54-type protein, helical bundle domain AMD22_RS13445 SM00478 endonuclease III AMD22_RS13455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS13455 SM00091 PAS domain AMD22_RS13455 SM00387 Histidine kinase-like ATPases AMD22_RS13455 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS13455 SM00448 cheY-homologous receiver domain AMD22_RS13470 SM00465 GIY-YIG type nucleases (URI domain) AMD22_RS13500 SM00507 HNH nucleases AMD22_RS13505 SM00861 Transketolase, pyrimidine binding domain AMD22_RS13530 SM00849 Metallo-beta-lactamase superfamily AMD22_RS13615 SM00422 helix_turn_helix, mercury resistance AMD22_RS13620 SM00411 bacterial (prokaryotic) histone like domain AMD22_RS13625 SM00873 B3/4 domain AMD22_RS13625 SM00874 tRNA synthetase B5 domain AMD22_RS13625 SM00896 Ferredoxin-fold anticodon binding domain AMD22_RS13650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD22_RS13655 SM00354 helix_turn _helix lactose operon repressor AMD22_RS13660 SM00642 Alpha-amylase domain AMD22_RS13690 SM00642 Alpha-amylase domain AMD22_RS13735 SM00382 ATPases associated with a variety of cellular activities AMD22_RS13795 SM00487 DEAD-like helicases superfamily AMD22_RS13795 SM00490 helicase superfamily c-terminal domain AMD22_RS14045 SM01001 AIR carboxylase AMD22_RS14065 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS14065 SM00322 K homology RNA-binding domain AMD22_RS14070 SM01387 AMD22_RS14070 AMD22_RS14090 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS14090 SM00322 K homology RNA-binding domain AMD22_RS14140 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD22_RS14145 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD22_RS14190 SM00822 AMD22_RS14190 AMD22_RS14205 SM00052 Putative diguanylate phosphodiesterase AMD22_RS14205 SM00267 diguanylate cyclase AMD22_RS14205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS14280 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD22_RS14310 SM00257 Lysin motif AMD22_RS14340 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS14405 SM01160 AMD22_RS14405 AMD22_RS14460 SM00098 Alkaline phosphatase homologues AMD22_RS14465 SM00977 TilS substrate C-terminal domain AMD22_RS14480 SM01351 AMD22_RS14480 AMD22_RS14515 SM00316 Ribosomal protein S1-like RNA-binding domain AMD22_RS14650 SM00382 ATPases associated with a variety of cellular activities AMD22_RS14680 SM00448 cheY-homologous receiver domain AMD22_RS14680 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS14685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS14685 SM00387 Histidine kinase-like ATPases AMD22_RS14685 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS14720 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS14720 SM00267 diguanylate cyclase AMD22_RS14725 SM00363 S4 RNA-binding domain AMD22_RS14730 SM00052 Putative diguanylate phosphodiesterase AMD22_RS14730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS14730 SM00091 PAS domain AMD22_RS14730 SM00267 diguanylate cyclase AMD22_RS14735 SM00487 DEAD-like helicases superfamily AMD22_RS14735 SM00490 helicase superfamily c-terminal domain AMD22_RS14780 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS14780 SM00478 endonuclease III AMD22_RS14780 SM01009 AlkA N-terminal domain AMD22_RS14800 SM00829 Enoylreductase AMD22_RS14865 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS14935 SM00645 Papain family cysteine protease AMD22_RS14940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS14940 SM00387 Histidine kinase-like ATPases AMD22_RS14940 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS14945 SM00448 cheY-homologous receiver domain AMD22_RS14945 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS14960 SM00487 DEAD-like helicases superfamily AMD22_RS14960 SM00490 helicase superfamily c-terminal domain AMD22_RS14960 SM00982 AMD22_RS14960 AMD22_RS14960 SM01058 CarD-like/TRCF domain AMD22_RS14995 SM00073 Histidine Phosphotransfer domain AMD22_RS14995 SM00260 Two component signalling adaptor domain AMD22_RS14995 SM00387 Histidine kinase-like ATPases AMD22_RS14995 SM01231 AMD22_RS14995 AMD22_RS15000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS15000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS15005 SM00260 Two component signalling adaptor domain AMD22_RS15010 SM00052 Putative diguanylate phosphodiesterase AMD22_RS15010 SM00448 cheY-homologous receiver domain AMD22_RS15015 SM00138 Methyltransferase, chemotaxis proteins AMD22_RS15020 SM00448 cheY-homologous receiver domain AMD22_RS15025 SM00155 Phospholipase D. Active site motifs. AMD22_RS15040 SM00855 Phosphoglycerate mutase family AMD22_RS15090 SM00248 ankyrin repeats AMD22_RS15135 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD22_RS15140 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD22_RS15150 SM00829 Enoylreductase AMD22_RS15155 SM00267 diguanylate cyclase AMD22_RS15220 SM00732 Likely ribonuclease with RNase H fold. AMD22_RS15255 SM00382 ATPases associated with a variety of cellular activities AMD22_RS15270 SM00411 bacterial (prokaryotic) histone like domain AMD22_RS15300 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AMD22_RS15315 SM00382 ATPases associated with a variety of cellular activities AMD22_RS15345 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD22_RS15350 SM00671 Sel1-like repeats. AMD22_RS15380 SM00054 EF-hand, calcium binding motif AMD22_RS15470 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS15490 SM00382 ATPases associated with a variety of cellular activities AMD22_RS15535 SM00924 MgtE intracellular N domain AMD22_RS15565 SM00656 AMD22_RS15565 AMD22_RS15580 SM00421 helix_turn_helix, Lux Regulon AMD22_RS15605 SM00849 Metallo-beta-lactamase superfamily AMD22_RS15615 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD22_RS15635 SM00422 helix_turn_helix, mercury resistance AMD22_RS15775 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS15785 SM00387 Histidine kinase-like ATPases AMD22_RS15785 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS15785 SM00448 cheY-homologous receiver domain AMD22_RS15790 SM00387 Histidine kinase-like ATPases AMD22_RS15790 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS15790 SM00448 cheY-homologous receiver domain AMD22_RS15800 SM00387 Histidine kinase-like ATPases AMD22_RS15800 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS15800 SM00448 cheY-homologous receiver domain AMD22_RS15805 SM00867 YceI-like domain AMD22_RS15815 SM00867 YceI-like domain AMD22_RS15870 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS15900 SM00028 Tetratricopeptide repeats AMD22_RS16000 SM00812 Alpha-L-fucosidase AMD22_RS16005 SM00636 AMD22_RS16005 AMD22_RS16020 SM00758 AMD22_RS16020 AMD22_RS16020 SM01217 AMD22_RS16020 AMD22_RS16050 SM01149 AMD22_RS16050 AMD22_RS16110 SM00260 Two component signalling adaptor domain AMD22_RS16120 SM00073 Histidine Phosphotransfer domain AMD22_RS16120 SM00260 Two component signalling adaptor domain AMD22_RS16120 SM00387 Histidine kinase-like ATPases AMD22_RS16120 SM00448 cheY-homologous receiver domain AMD22_RS16120 SM01231 AMD22_RS16120 AMD22_RS16125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS16130 SM00260 Two component signalling adaptor domain AMD22_RS16135 SM00448 cheY-homologous receiver domain AMD22_RS16140 SM00448 cheY-homologous receiver domain AMD22_RS16165 SM00491 AMD22_RS16165 AMD22_RS16190 SM00954 Region found in RelA / SpoT proteins AMD22_RS16235 SM00382 ATPases associated with a variety of cellular activities AMD22_RS16235 SM00487 DEAD-like helicases superfamily AMD22_RS16235 SM00490 helicase superfamily c-terminal domain AMD22_RS16235 SM00847 Helicase associated domain (HA2) Add an annotation AMD22_RS16245 SM00341 Helicase and RNase D C-terminal AMD22_RS16245 SM00487 DEAD-like helicases superfamily AMD22_RS16245 SM00490 helicase superfamily c-terminal domain AMD22_RS16245 SM00956 AMD22_RS16245 AMD22_RS16255 SM00448 cheY-homologous receiver domain AMD22_RS16280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS16280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS16295 SM00448 cheY-homologous receiver domain AMD22_RS16300 SM00091 PAS domain AMD22_RS16300 SM00911 HWE histidine kinase AMD22_RS16355 SM00382 ATPases associated with a variety of cellular activities AMD22_RS16370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD22_RS16405 SM00834 Putative regulatory protein AMD22_RS16445 SM00382 ATPases associated with a variety of cellular activities AMD22_RS16550 SM00855 Phosphoglycerate mutase family AMD22_RS16600 SM00382 ATPases associated with a variety of cellular activities AMD22_RS16600 SM01086 C-terminal, D2-small domain, of ClpB protein AMD22_RS16605 SM00382 ATPases associated with a variety of cellular activities AMD22_RS16615 SM00062 Bacterial periplasmic substrate-binding proteins AMD22_RS16690 SM00564 beta-propeller repeat AMD22_RS16695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS16800 SM01126 AMD22_RS16800 AMD22_RS16805 SM00881 CoA binding domain AMD22_RS16815 SM00387 Histidine kinase-like ATPases AMD22_RS16815 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS16820 SM00382 ATPases associated with a variety of cellular activities AMD22_RS16820 SM00448 cheY-homologous receiver domain AMD22_RS16885 SM00387 Histidine kinase-like ATPases AMD22_RS16885 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS16890 SM00448 cheY-homologous receiver domain AMD22_RS16890 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS16905 SM00642 Alpha-amylase domain AMD22_RS16910 SM00528 Domain in histone-like proteins of HNS family AMD22_RS16920 SM00318 Staphylococcal nuclease homologues AMD22_RS16985 SM00387 Histidine kinase-like ATPases AMD22_RS16985 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS16990 SM00448 cheY-homologous receiver domain AMD22_RS17005 SM01034 Sensors of blue-light using FAD AMD22_RS17055 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS17075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS17075 SM00387 Histidine kinase-like ATPases AMD22_RS17100 SM00255 Toll - interleukin 1 - resistance AMD22_RS17115 SM00869 Autotransporter beta-domain AMD22_RS17170 SM00354 helix_turn _helix lactose operon repressor AMD22_RS17200 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD22_RS17310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS17310 SM00387 Histidine kinase-like ATPases AMD22_RS17345 SM00506 Appr-1"-p processing enzyme AMD22_RS17385 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD22_RS17410 SM00849 Metallo-beta-lactamase superfamily AMD22_RS17425 SM00382 ATPases associated with a variety of cellular activities AMD22_RS17490 SM00861 Transketolase, pyrimidine binding domain AMD22_RS17505 SM00028 Tetratricopeptide repeats AMD22_RS17505 SM00327 von Willebrand factor (vWF) type A domain AMD22_RS17510 SM00327 von Willebrand factor (vWF) type A domain AMD22_RS17525 SM00382 ATPases associated with a variety of cellular activities AMD22_RS17530 SM00965 Secretin and TonB N terminus short domain AMD22_RS17580 SM00487 DEAD-like helicases superfamily AMD22_RS17580 SM00490 helicase superfamily c-terminal domain AMD22_RS17590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD22_RS17590 SM00954 Region found in RelA / SpoT proteins AMD22_RS17595 SM01409 AMD22_RS17595 AMD22_RS17600 SM00072 Guanylate kinase homologues. AMD22_RS17625 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS17650 SM01011 Aminopeptidase P, N-terminal domain AMD22_RS17720 SM00028 Tetratricopeptide repeats AMD22_RS17720 SM00382 ATPases associated with a variety of cellular activities AMD22_RS17720 SM00421 helix_turn_helix, Lux Regulon AMD22_RS17790 SM00464 Found in ATP-dependent protease La (LON) AMD22_RS17840 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS17845 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS17860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS17890 SM00917 LeuA allosteric (dimerisation) domain AMD22_RS17895 SM01329 AMD22_RS17895 AMD22_RS17915 SM00267 diguanylate cyclase AMD22_RS17965 SM00919 Malic enzyme, NAD binding domain AMD22_RS17965 SM01274 AMD22_RS17965 AMD22_RS17980 SM00387 Histidine kinase-like ATPases AMD22_RS17980 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS17980 SM00448 cheY-homologous receiver domain AMD22_RS18015 SM00421 helix_turn_helix, Lux Regulon AMD22_RS18015 SM00448 cheY-homologous receiver domain AMD22_RS18025 SM00387 Histidine kinase-like ATPases AMD22_RS18025 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS18030 SM00448 cheY-homologous receiver domain AMD22_RS18030 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS18045 SM00822 AMD22_RS18045 AMD22_RS18050 SM00354 helix_turn _helix lactose operon repressor AMD22_RS18065 SM00642 Alpha-amylase domain AMD22_RS18075 SM01154 AMD22_RS18075 AMD22_RS18110 SM00450 Rhodanese Homology Domain AMD22_RS18170 SM00028 Tetratricopeptide repeats AMD22_RS18255 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD22_RS18255 SM00866 AMD22_RS18255 AMD22_RS18315 SM00382 ATPases associated with a variety of cellular activities AMD22_RS18345 SM01211 AMD22_RS18345 AMD22_RS18410 SM00656 AMD22_RS18410 AMD22_RS18440 SM00528 Domain in histone-like proteins of HNS family AMD22_RS18455 SM00382 ATPases associated with a variety of cellular activities AMD22_RS18485 SM00882 Coenzyme A transferase AMD22_RS18490 SM00882 Coenzyme A transferase AMD22_RS18505 SM00984 UDP binding domain AMD22_RS18530 SM00893 Electron transfer flavoprotein domain AMD22_RS18535 SM00893 Electron transfer flavoprotein domain AMD22_RS18605 SM00382 ATPases associated with a variety of cellular activities AMD22_RS18620 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS18660 SM00487 DEAD-like helicases superfamily AMD22_RS18660 SM00490 helicase superfamily c-terminal domain AMD22_RS18695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS18730 SM00825 Beta-ketoacyl synthase AMD22_RS18800 SM00382 ATPases associated with a variety of cellular activities AMD22_RS18820 SM00382 ATPases associated with a variety of cellular activities AMD22_RS18820 SM00448 cheY-homologous receiver domain AMD22_RS18825 SM00387 Histidine kinase-like ATPases AMD22_RS18840 SM00830 Chorismate mutase type II AMD22_RS18850 SM00382 ATPases associated with a variety of cellular activities AMD22_RS18920 SM00986 Uracil DNA glycosylase superfamily AMD22_RS18920 SM00987 UreE urease accessory protein, C-terminal domain AMD22_RS18960 SM00382 ATPases associated with a variety of cellular activities AMD22_RS18960 SM00930 AMD22_RS18960 AMD22_RS18980 SM00387 Histidine kinase-like ATPases AMD22_RS18980 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS18980 SM00448 cheY-homologous receiver domain AMD22_RS19035 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS19035 SM00091 PAS domain AMD22_RS19035 SM00387 Histidine kinase-like ATPases AMD22_RS19035 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS19035 SM00448 cheY-homologous receiver domain AMD22_RS19055 SM01005 Alanine racemase, C-terminal domain AMD22_RS19065 SM00344 helix_turn_helix ASNC type AMD22_RS19120 SM00382 ATPases associated with a variety of cellular activities AMD22_RS19130 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMD22_RS19135 SM00986 Uracil DNA glycosylase superfamily AMD22_RS19135 SM00987 UreE urease accessory protein, C-terminal domain AMD22_RS19140 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD22_RS19205 SM00448 cheY-homologous receiver domain AMD22_RS19205 SM00850 LytTr DNA-binding domain AMD22_RS19210 SM00387 Histidine kinase-like ATPases AMD22_RS19250 SM00091 PAS domain AMD22_RS19250 SM00138 Methyltransferase, chemotaxis proteins AMD22_RS19250 SM00911 HWE histidine kinase AMD22_RS19255 SM00448 cheY-homologous receiver domain AMD22_RS19265 SM00382 ATPases associated with a variety of cellular activities AMD22_RS19265 SM00448 cheY-homologous receiver domain AMD22_RS19320 SM00382 ATPases associated with a variety of cellular activities AMD22_RS19395 SM00382 ATPases associated with a variety of cellular activities AMD22_RS19400 SM00631 AMD22_RS19400 AMD22_RS19440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD22_RS19440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS19445 SM00477 DNA/RNA non-specific endonuclease AMD22_RS19445 SM00892 DNA/RNA non-specific endonuclease AMD22_RS19595 SM00257 Lysin motif AMD22_RS19620 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMD22_RS19620 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMD22_RS19620 SM00493 AMD22_RS19620 AMD22_RS19675 SM00487 DEAD-like helicases superfamily AMD22_RS19675 SM00490 helicase superfamily c-terminal domain AMD22_RS19710 SM00986 Uracil DNA glycosylase superfamily AMD22_RS19710 SM00987 UreE urease accessory protein, C-terminal domain AMD22_RS19715 SM00448 cheY-homologous receiver domain AMD22_RS19725 SM00382 ATPases associated with a variety of cellular activities AMD22_RS19730 SM00487 DEAD-like helicases superfamily AMD22_RS19730 SM00490 helicase superfamily c-terminal domain AMD22_RS19740 SM00357 Cold shock protein domain AMD22_RS19740 SM00382 ATPases associated with a variety of cellular activities AMD22_RS19740 SM00959 Rho termination factor, N-terminal domain AMD22_RS19770 SM00487 DEAD-like helicases superfamily AMD22_RS19810 SM00257 Lysin motif AMD22_RS19840 SM01150 AMD22_RS19840 AMD22_RS19885 SM00644 AMD22_RS19885 AMD22_RS19895 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD22_RS19930 SM01217 AMD22_RS19930 AMD22_RS19935 SM00905 Dihydroneopterin aldolase AMD22_RS19960 SM00400 zinc finger AMD22_RS19960 SM00493 AMD22_RS19960 AMD22_RS19960 SM00766 DNA primase DnaG DnaB-binding AMD22_RS20060 SM00363 S4 RNA-binding domain AMD22_RS20105 SM00470 ParB-like nuclease domain AMD22_RS20125 SM01259 AMD22_RS20125 AMD22_RS20155 SM00836 DALR anticodon binding domain AMD22_RS20155 SM01016 Arginyl tRNA synthetase N terminal dom AMD22_RS20185 SM00823 Phosphopantetheine attachment site AMD22_RS20185 SM00824 Thioesterase AMD22_RS20230 SM00938 Nitrogen regulatory protein P-II AMD22_RS20240 SM00382 ATPases associated with a variety of cellular activities AMD22_RS20255 SM00052 Putative diguanylate phosphodiesterase AMD22_RS20285 SM00244 prohibitin homologues AMD22_RS20335 SM00448 cheY-homologous receiver domain AMD22_RS20335 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS20340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD22_RS20340 SM00387 Histidine kinase-like ATPases AMD22_RS20340 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS20360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD22_RS20405 SM01060 AMD22_RS20405 AMD22_RS20420 SM00421 helix_turn_helix, Lux Regulon AMD22_RS20420 SM00448 cheY-homologous receiver domain AMD22_RS20435 SM00382 ATPases associated with a variety of cellular activities AMD22_RS20475 SM00849 Metallo-beta-lactamase superfamily AMD22_RS20505 SM00960 Roadblock/LC7 domain AMD22_RS20570 SM00387 Histidine kinase-like ATPases AMD22_RS20570 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS20575 SM00448 cheY-homologous receiver domain AMD22_RS20575 SM00862 Transcriptional regulatory protein, C terminal AMD22_RS20595 SM00248 ankyrin repeats AMD22_RS20605 SM00491 AMD22_RS20605 AMD22_RS20635 SM00477 DNA/RNA non-specific endonuclease AMD22_RS20635 SM00892 DNA/RNA non-specific endonuclease AMD22_RS20650 SM01004 Delta-aminolevulinic acid dehydratase AMD22_RS20700 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD22_RS20720 SM00382 ATPases associated with a variety of cellular activities AMD22_RS20730 SM00530 Helix-turn-helix XRE-family like proteins AMD22_RS20770 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS20780 SM00382 ATPases associated with a variety of cellular activities AMD22_RS20840 SM00881 CoA binding domain AMD22_RS20845 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD22_RS20845 SM00924 MgtE intracellular N domain AMD22_RS20850 SM01057 Eukaryotic-type carbonic anhydrase AMD22_RS20875 SM00248 ankyrin repeats AMD22_RS20885 SM00825 Beta-ketoacyl synthase AMD22_RS20910 SM00822 AMD22_RS20910 AMD22_RS20955 SM00563 Phosphate acyltransferases AMD22_RS21010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD22_RS21010 SM00474 3'-5' exonuclease AMD22_RS21010 SM00475 5'-3' exonuclease AMD22_RS21010 SM00482 DNA polymerase A domain AMD22_RS21025 SM00912 haemagglutination activity domain AMD22_RS21045 SM00331 Sigma factor PP2C-like phosphatases AMD22_RS21045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD22_RS21070 SM00240 Forkhead associated domain AMD22_RS21085 SM00028 Tetratricopeptide repeats AMD22_RS21095 SM00220 Serine/Threonine protein kinases, catalytic domain AMD22_RS21115 SM00965 Secretin and TonB N terminus short domain AMD22_RS21125 SM00915 Jacalin-like lectin domain AMD22_RS21150 SM00382 ATPases associated with a variety of cellular activities AMD22_RS21150 SM01086 C-terminal, D2-small domain, of ClpB protein AMD22_RS21190 SM00342 helix_turn_helix, arabinose operon control protein AMD22_RS21200 SM01266 AMD22_RS21200 AMD22_RS21220 SM00155 Phospholipase D. Active site motifs. AMD22_RS21360 SM00421 helix_turn_helix, Lux Regulon AMD22_RS21360 SM00448 cheY-homologous receiver domain AMD22_RS21415 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD22_RS21435 SM00346 helix_turn_helix isocitrate lyase regulation AMD22_RS21445 SM00091 PAS domain AMD22_RS21445 SM00387 Histidine kinase-like ATPases AMD22_RS21445 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS21445 SM00448 cheY-homologous receiver domain AMD22_RS21475 SM00564 beta-propeller repeat AMD22_RS21530 SM00382 ATPases associated with a variety of cellular activities AMD22_RS21535 SM00836 DALR anticodon binding domain AMD22_RS21545 SM00382 ATPases associated with a variety of cellular activities AMD22_RS21620 SM00354 helix_turn _helix lactose operon repressor AMD22_RS21635 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD22_RS21645 SM00758 AMD22_RS21645 AMD22_RS21645 SM01217 AMD22_RS21645 AMD22_RS21665 SM00612 AMD22_RS21665 AMD22_RS21695 SM01007 Class II Aldolase and Adducin N-terminal domain AMD22_RS21730 SM00633 Glycosyl hydrolase family 10 AMD22_RS21745 SM00633 Glycosyl hydrolase family 10 AMD22_RS21760 SM00633 Glycosyl hydrolase family 10 AMD22_RS21815 SM00829 Enoylreductase AMD22_RS21820 SM00563 Phosphate acyltransferases AMD22_RS21830 SM00354 helix_turn _helix lactose operon repressor AMD22_RS21855 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD22_RS21890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS21890 SM00388 His Kinase A (phosphoacceptor) domain AMD22_RS21905 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD22_RS21905 SM01232 AMD22_RS21905 AMD22_RS21945 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS21945 SM00091 PAS domain AMD22_RS22000 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD22_RS22035 SM00155 Phospholipase D. Active site motifs. AMD22_RS22120 SM00796 Allophanate hydrolase subunit 1 AMD22_RS22120 SM00797 Allophanate hydrolase subunit 2 AMD22_RS22120 SM00878 Biotin carboxylase C-terminal domain AMD22_RS22180 SM00382 ATPases associated with a variety of cellular activities AMD22_RS22230 SM00829 Enoylreductase AMD22_RS22270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD22_RS22270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD22_RS22270 SM00091 PAS domain AMD22_RS22270 SM00267 diguanylate cyclase AMD22_RS22300 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD22_RS22325 SM00014 Acid phosphatase homologues AMD22_RS22335 SM00028 Tetratricopeptide repeats