BJD09_RS00005 SM00073 Histidine Phosphotransfer domain BJD09_RS00005 SM00260 Two component signalling adaptor domain BJD09_RS00005 SM00387 Histidine kinase-like ATPases BJD09_RS00005 SM00448 cheY-homologous receiver domain BJD09_RS00005 SM01231 BJD09_RS00005 BJD09_RS00015 SM00260 Two component signalling adaptor domain BJD09_RS00050 SM00369 Leucine-rich repeats, typical (most populated) subfamily BJD09_RS00090 SM01149 BJD09_RS00090 BJD09_RS00120 SM00758 BJD09_RS00120 BJD09_RS00120 SM01217 BJD09_RS00120 BJD09_RS00135 SM00636 BJD09_RS00135 BJD09_RS00140 SM00812 Alpha-L-fucosidase BJD09_RS00240 SM00028 Tetratricopeptide repeats BJD09_RS00270 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS00330 SM00867 YceI-like domain BJD09_RS00340 SM00867 YceI-like domain BJD09_RS00345 SM00387 Histidine kinase-like ATPases BJD09_RS00345 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS00345 SM00448 cheY-homologous receiver domain BJD09_RS00355 SM00448 cheY-homologous receiver domain BJD09_RS00360 SM00387 Histidine kinase-like ATPases BJD09_RS00360 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS00360 SM00448 cheY-homologous receiver domain BJD09_RS00365 SM00387 Histidine kinase-like ATPases BJD09_RS00365 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS00365 SM00448 cheY-homologous receiver domain BJD09_RS00375 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS00515 SM00422 helix_turn_helix, mercury resistance BJD09_RS00545 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BJD09_RS00555 SM00849 Metallo-beta-lactamase superfamily BJD09_RS00595 SM00421 helix_turn_helix, Lux Regulon BJD09_RS00615 SM00656 BJD09_RS00615 BJD09_RS00655 SM00924 MgtE intracellular N domain BJD09_RS00700 SM00382 ATPases associated with a variety of cellular activities BJD09_RS00720 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS00810 SM00054 EF-hand, calcium binding motif BJD09_RS00840 SM00671 Sel1-like repeats. BJD09_RS00845 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BJD09_RS00875 SM00382 ATPases associated with a variety of cellular activities BJD09_RS00890 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BJD09_RS00920 SM00411 bacterial (prokaryotic) histone like domain BJD09_RS00935 SM00382 ATPases associated with a variety of cellular activities BJD09_RS00970 SM00732 Likely ribonuclease with RNase H fold. BJD09_RS01040 SM00267 diguanylate cyclase BJD09_RS01045 SM00829 Enoylreductase BJD09_RS01055 SM01092 CO dehydrogenase flavoprotein C-terminal domain BJD09_RS01060 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJD09_RS01090 SM00248 ankyrin repeats BJD09_RS01145 SM00855 Phosphoglycerate mutase family BJD09_RS01160 SM00155 Phospholipase D. Active site motifs. BJD09_RS01165 SM00448 cheY-homologous receiver domain BJD09_RS01170 SM00138 Methyltransferase, chemotaxis proteins BJD09_RS01175 SM00052 Putative diguanylate phosphodiesterase BJD09_RS01175 SM00448 cheY-homologous receiver domain BJD09_RS01180 SM00260 Two component signalling adaptor domain BJD09_RS01185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS01185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS01195 SM00073 Histidine Phosphotransfer domain BJD09_RS01195 SM00260 Two component signalling adaptor domain BJD09_RS01195 SM00387 Histidine kinase-like ATPases BJD09_RS01195 SM01231 BJD09_RS01195 BJD09_RS01230 SM00487 DEAD-like helicases superfamily BJD09_RS01230 SM00490 helicase superfamily c-terminal domain BJD09_RS01230 SM00982 BJD09_RS01230 BJD09_RS01230 SM01058 CarD-like/TRCF domain BJD09_RS01245 SM00448 cheY-homologous receiver domain BJD09_RS01245 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS01250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS01250 SM00387 Histidine kinase-like ATPases BJD09_RS01250 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS01255 SM00645 Papain family cysteine protease BJD09_RS01325 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS01400 SM00829 Enoylreductase BJD09_RS01420 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS01420 SM00478 endonuclease III BJD09_RS01420 SM01009 AlkA N-terminal domain BJD09_RS01465 SM00487 DEAD-like helicases superfamily BJD09_RS01465 SM00490 helicase superfamily c-terminal domain BJD09_RS01470 SM00052 Putative diguanylate phosphodiesterase BJD09_RS01470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS01470 SM00091 PAS domain BJD09_RS01470 SM00267 diguanylate cyclase BJD09_RS01475 SM00363 S4 RNA-binding domain BJD09_RS01480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS01480 SM00267 diguanylate cyclase BJD09_RS01515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS01515 SM00387 Histidine kinase-like ATPases BJD09_RS01515 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS01520 SM00448 cheY-homologous receiver domain BJD09_RS01520 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS01555 SM00382 ATPases associated with a variety of cellular activities BJD09_RS01695 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS01730 SM01351 BJD09_RS01730 BJD09_RS01745 SM00977 TilS substrate C-terminal domain BJD09_RS01755 SM00098 Alkaline phosphatase homologues BJD09_RS01810 SM01160 BJD09_RS01810 BJD09_RS01885 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS01925 SM00257 Lysin motif BJD09_RS01955 SM00859 Semialdehyde dehydrogenase, NAD binding domain BJD09_RS02025 SM00052 Putative diguanylate phosphodiesterase BJD09_RS02025 SM00267 diguanylate cyclase BJD09_RS02025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS02040 SM00822 BJD09_RS02040 BJD09_RS02085 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BJD09_RS02090 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BJD09_RS02140 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS02140 SM00322 K homology RNA-binding domain BJD09_RS02160 SM01387 BJD09_RS02160 BJD09_RS02165 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS02165 SM00322 K homology RNA-binding domain BJD09_RS02185 SM01001 AIR carboxylase BJD09_RS02490 SM00487 DEAD-like helicases superfamily BJD09_RS02490 SM00490 helicase superfamily c-terminal domain BJD09_RS02550 SM00382 ATPases associated with a variety of cellular activities BJD09_RS02610 SM00642 Alpha-amylase domain BJD09_RS02655 SM00642 Alpha-amylase domain BJD09_RS02660 SM00354 helix_turn _helix lactose operon repressor BJD09_RS02665 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BJD09_RS02690 SM00873 B3/4 domain BJD09_RS02690 SM00874 tRNA synthetase B5 domain BJD09_RS02690 SM00896 Ferredoxin-fold anticodon binding domain BJD09_RS02695 SM00411 bacterial (prokaryotic) histone like domain BJD09_RS02700 SM00422 helix_turn_helix, mercury resistance BJD09_RS02785 SM00849 Metallo-beta-lactamase superfamily BJD09_RS02810 SM00861 Transketolase, pyrimidine binding domain BJD09_RS02815 SM00507 HNH nucleases BJD09_RS02850 SM00465 GIY-YIG type nucleases (URI domain) BJD09_RS02865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS02865 SM00091 PAS domain BJD09_RS02865 SM00387 Histidine kinase-like ATPases BJD09_RS02865 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS02865 SM00448 cheY-homologous receiver domain BJD09_RS02875 SM00478 endonuclease III BJD09_RS02885 SM00382 ATPases associated with a variety of cellular activities BJD09_RS02885 SM00962 SRP54-type protein, GTPase domain BJD09_RS02885 SM00963 SRP54-type protein, helical bundle domain BJD09_RS02890 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS02915 SM01130 BJD09_RS02915 BJD09_RS02970 SM00944 Pro-kumamolisin, activation domain BJD09_RS03020 SM00387 Histidine kinase-like ATPases BJD09_RS03090 SM00344 helix_turn_helix ASNC type BJD09_RS03105 SM01323 BJD09_RS03105 BJD09_RS03175 SM00354 helix_turn _helix lactose operon repressor BJD09_RS03210 SM00448 cheY-homologous receiver domain BJD09_RS03210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD09_RS03215 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS03215 SM00091 PAS domain BJD09_RS03215 SM00387 Histidine kinase-like ATPases BJD09_RS03215 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS03215 SM00448 cheY-homologous receiver domain BJD09_RS03215 SM01079 BJD09_RS03215 BJD09_RS03275 SM00267 diguanylate cyclase BJD09_RS03275 SM00448 cheY-homologous receiver domain BJD09_RS03285 SM01230 BJD09_RS03285 BJD09_RS03295 SM01230 BJD09_RS03295 BJD09_RS03325 SM00382 ATPases associated with a variety of cellular activities BJD09_RS03355 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS03355 SM01091 Transporter associated domain BJD09_RS03380 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS03445 SM00487 DEAD-like helicases superfamily BJD09_RS03445 SM00490 helicase superfamily c-terminal domain BJD09_RS03455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS03455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS03460 SM00260 Two component signalling adaptor domain BJD09_RS03465 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS03465 SM00267 diguanylate cyclase BJD09_RS03530 SM00857 Resolvase, N terminal domain BJD09_RS03615 SM00528 Domain in histone-like proteins of HNS family BJD09_RS03630 SM00474 3'-5' exonuclease BJD09_RS03675 SM00646 BJD09_RS03675 BJD09_RS03680 SM00853 MutL C terminal dimerisation domain BJD09_RS03680 SM01340 BJD09_RS03680 BJD09_RS03705 SM00822 BJD09_RS03705 BJD09_RS03720 SM00052 Putative diguanylate phosphodiesterase BJD09_RS03720 SM00267 diguanylate cyclase BJD09_RS03730 SM01322 BJD09_RS03730 BJD09_RS03735 SM00357 Cold shock protein domain BJD09_RS03760 SM00487 DEAD-like helicases superfamily BJD09_RS03760 SM00490 helicase superfamily c-terminal domain BJD09_RS03765 SM00382 ATPases associated with a variety of cellular activities BJD09_RS03805 SM00052 Putative diguanylate phosphodiesterase BJD09_RS03805 SM00267 diguanylate cyclase BJD09_RS03805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS03815 SM00841 Elongation factor P, C-terminal BJD09_RS03815 SM01185 BJD09_RS03815 BJD09_RS03855 SM00656 BJD09_RS03855 BJD09_RS03885 SM00849 Metallo-beta-lactamase superfamily BJD09_RS03930 SM01234 BJD09_RS03930 BJD09_RS03950 SM00840 BJD09_RS03950 BJD09_RS03990 SM00859 Semialdehyde dehydrogenase, NAD binding domain BJD09_RS04050 SM00382 ATPases associated with a variety of cellular activities BJD09_RS04055 SM00382 ATPases associated with a variety of cellular activities BJD09_RS04060 SM00357 Cold shock protein domain BJD09_RS04110 SM00382 ATPases associated with a variety of cellular activities BJD09_RS04135 SM00363 S4 RNA-binding domain BJD09_RS04160 SM00354 helix_turn _helix lactose operon repressor BJD09_RS04240 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS04245 SM00411 bacterial (prokaryotic) histone like domain BJD09_RS04255 SM00028 Tetratricopeptide repeats BJD09_RS04265 SM00822 BJD09_RS04265 BJD09_RS04290 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS04290 SM01240 BJD09_RS04290 BJD09_RS04545 SM00487 DEAD-like helicases superfamily BJD09_RS04585 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS04700 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BJD09_RS04700 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BJD09_RS04700 SM00493 BJD09_RS04700 BJD09_RS04750 SM00382 ATPases associated with a variety of cellular activities BJD09_RS04770 SM00736 Dystroglycan-type cadherin-like domains. BJD09_RS04815 SM00966 SpoVT / AbrB like domain BJD09_RS04885 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS04920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS04925 SM00421 helix_turn_helix, Lux Regulon BJD09_RS04925 SM00448 cheY-homologous receiver domain BJD09_RS04930 SM00387 Histidine kinase-like ATPases BJD09_RS04935 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS04975 SM00448 cheY-homologous receiver domain BJD09_RS05015 SM00052 Putative diguanylate phosphodiesterase BJD09_RS05020 SM00869 Autotransporter beta-domain BJD09_RS05025 SM00421 helix_turn_helix, Lux Regulon BJD09_RS05025 SM00448 cheY-homologous receiver domain BJD09_RS05030 SM00387 Histidine kinase-like ATPases BJD09_RS05030 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS05055 SM00869 Autotransporter beta-domain BJD09_RS05075 SM00448 cheY-homologous receiver domain BJD09_RS05075 SM00850 LytTr DNA-binding domain BJD09_RS05235 SM01034 Sensors of blue-light using FAD BJD09_RS05275 SM00363 S4 RNA-binding domain BJD09_RS05280 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS05285 SM00421 helix_turn_helix, Lux Regulon BJD09_RS05285 SM00448 cheY-homologous receiver domain BJD09_RS05290 SM00450 Rhodanese Homology Domain BJD09_RS05310 SM00984 UDP binding domain BJD09_RS05360 SM00823 Phosphopantetheine attachment site BJD09_RS05360 SM00824 Thioesterase BJD09_RS05390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BJD09_RS05390 SM00465 GIY-YIG type nucleases (URI domain) BJD09_RS05400 SM00226 Low molecular weight phosphatase family BJD09_RS05415 SM00382 ATPases associated with a variety of cellular activities BJD09_RS05430 SM00849 Metallo-beta-lactamase superfamily BJD09_RS05440 SM00382 ATPases associated with a variety of cellular activities BJD09_RS05495 SM00382 ATPases associated with a variety of cellular activities BJD09_RS05595 SM00448 cheY-homologous receiver domain BJD09_RS05600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS05600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS05600 SM00091 PAS domain BJD09_RS05600 SM00387 Histidine kinase-like ATPases BJD09_RS05600 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS05600 SM00448 cheY-homologous receiver domain BJD09_RS05605 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS05605 SM00732 Likely ribonuclease with RNase H fold. BJD09_RS05675 SM00479 BJD09_RS05675 BJD09_RS05685 SM00529 Helix-turn-helix diphteria tox regulatory element BJD09_RS05710 SM00852 Probable molybdopterin binding domain BJD09_RS05760 SM00450 Rhodanese Homology Domain BJD09_RS05765 SM00852 Probable molybdopterin binding domain BJD09_RS05770 SM00382 ATPases associated with a variety of cellular activities BJD09_RS05775 SM00564 beta-propeller repeat BJD09_RS05790 SM00028 Tetratricopeptide repeats BJD09_RS05800 SM00562 BJD09_RS05800 BJD09_RS05830 SM00382 ATPases associated with a variety of cellular activities BJD09_RS05850 SM00382 ATPases associated with a variety of cellular activities BJD09_RS05850 SM00843 BJD09_RS05850 BJD09_RS05870 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS05875 SM00382 ATPases associated with a variety of cellular activities BJD09_RS05875 SM01086 C-terminal, D2-small domain, of ClpB protein BJD09_RS05900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS05910 SM00052 Putative diguanylate phosphodiesterase BJD09_RS05910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS05910 SM00091 PAS domain BJD09_RS05910 SM00267 diguanylate cyclase BJD09_RS05915 SM00091 PAS domain BJD09_RS05915 SM00387 Histidine kinase-like ATPases BJD09_RS05920 SM00052 Putative diguanylate phosphodiesterase BJD09_RS05920 SM00267 diguanylate cyclase BJD09_RS05920 SM00448 cheY-homologous receiver domain BJD09_RS05925 SM00387 Histidine kinase-like ATPases BJD09_RS05940 SM00858 BJD09_RS05940 BJD09_RS05945 SM00260 Two component signalling adaptor domain BJD09_RS05945 SM00448 cheY-homologous receiver domain BJD09_RS05995 SM00047 Lysozyme subfamily 2 BJD09_RS06035 SM00421 helix_turn_helix, Lux Regulon BJD09_RS06035 SM00448 cheY-homologous receiver domain BJD09_RS06045 SM00448 cheY-homologous receiver domain BJD09_RS06050 SM00382 ATPases associated with a variety of cellular activities BJD09_RS06075 SM00822 BJD09_RS06075 BJD09_RS06125 SM00382 ATPases associated with a variety of cellular activities BJD09_RS06180 SM00267 diguanylate cyclase BJD09_RS06190 SM00267 diguanylate cyclase BJD09_RS06195 SM00052 Putative diguanylate phosphodiesterase BJD09_RS06195 SM00267 diguanylate cyclase BJD09_RS06210 SM00382 ATPases associated with a variety of cellular activities BJD09_RS06210 SM00962 SRP54-type protein, GTPase domain BJD09_RS06225 SM00448 cheY-homologous receiver domain BJD09_RS06235 SM00073 Histidine Phosphotransfer domain BJD09_RS06235 SM00260 Two component signalling adaptor domain BJD09_RS06235 SM00387 Histidine kinase-like ATPases BJD09_RS06235 SM01231 BJD09_RS06235 BJD09_RS06265 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS06350 SM00220 Serine/Threonine protein kinases, catalytic domain BJD09_RS06385 SM00260 Two component signalling adaptor domain BJD09_RS06395 SM00448 cheY-homologous receiver domain BJD09_RS06400 SM00073 Histidine Phosphotransfer domain BJD09_RS06400 SM00260 Two component signalling adaptor domain BJD09_RS06400 SM00387 Histidine kinase-like ATPases BJD09_RS06400 SM01231 BJD09_RS06400 BJD09_RS06405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06415 SM01049 BJD09_RS06415 BJD09_RS06420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS06505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS06510 SM00138 Methyltransferase, chemotaxis proteins BJD09_RS06520 SM00448 cheY-homologous receiver domain BJD09_RS06525 SM00052 Putative diguanylate phosphodiesterase BJD09_RS06525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS06525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS06525 SM00091 PAS domain BJD09_RS06525 SM00267 diguanylate cyclase BJD09_RS06545 SM00966 SpoVT / AbrB like domain BJD09_RS06570 SM00073 Histidine Phosphotransfer domain BJD09_RS06570 SM00387 Histidine kinase-like ATPases BJD09_RS06570 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS06570 SM00448 cheY-homologous receiver domain BJD09_RS06575 SM00448 cheY-homologous receiver domain BJD09_RS06575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD09_RS06585 SM00937 BJD09_RS06585 BJD09_RS06590 SM00850 LytTr DNA-binding domain BJD09_RS06645 SM00851 MGS-like domain BJD09_RS06645 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BJD09_RS06655 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BJD09_RS06690 SM00899 BJD09_RS06690 BJD09_RS06710 SM00822 BJD09_RS06710 BJD09_RS06715 SM00841 Elongation factor P, C-terminal BJD09_RS06715 SM01185 BJD09_RS06715 BJD09_RS06760 SM01007 Class II Aldolase and Adducin N-terminal domain BJD09_RS06835 SM00100 Cyclic nucleotide-monophosphate binding domain BJD09_RS06835 SM00419 helix_turn_helix, cAMP Regulatory protein BJD09_RS06895 SM00912 haemagglutination activity domain BJD09_RS06980 SM00014 Acid phosphatase homologues BJD09_RS06995 SM00387 Histidine kinase-like ATPases BJD09_RS07000 SM00448 cheY-homologous receiver domain BJD09_RS07015 SM00052 Putative diguanylate phosphodiesterase BJD09_RS07015 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS07015 SM00267 diguanylate cyclase BJD09_RS07095 SM00646 BJD09_RS07095 BJD09_RS07135 SM00758 BJD09_RS07135 BJD09_RS07180 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BJD09_RS07205 SM01130 BJD09_RS07205 BJD09_RS07225 SM00670 Large family of predicted nucleotide-binding domains BJD09_RS07275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS07275 SM00091 PAS domain BJD09_RS07275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS07295 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BJD09_RS07310 SM00382 ATPases associated with a variety of cellular activities BJD09_RS07350 SM00382 ATPases associated with a variety of cellular activities BJD09_RS07360 SM01103 BJD09_RS07360 BJD09_RS07370 SM00257 Lysin motif BJD09_RS07390 SM00463 Small MutS-related domain BJD09_RS07415 SM01192 BJD09_RS07415 BJD09_RS07415 SM01193 BJD09_RS07415 BJD09_RS07440 SM00387 Histidine kinase-like ATPases BJD09_RS07440 SM00433 TopoisomeraseII BJD09_RS07470 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS07470 SM01091 Transporter associated domain BJD09_RS07495 SM00382 ATPases associated with a variety of cellular activities BJD09_RS07505 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS07665 SM00091 PAS domain BJD09_RS07665 SM00387 Histidine kinase-like ATPases BJD09_RS07665 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS07665 SM00448 cheY-homologous receiver domain BJD09_RS07670 SM00382 ATPases associated with a variety of cellular activities BJD09_RS07680 SM00448 cheY-homologous receiver domain BJD09_RS07685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS07685 SM00091 PAS domain BJD09_RS07685 SM00387 Histidine kinase-like ATPases BJD09_RS07685 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS07685 SM00448 cheY-homologous receiver domain BJD09_RS07695 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS07705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS07705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS07795 SM00830 Chorismate mutase type II BJD09_RS07815 SM00240 Forkhead associated domain BJD09_RS07840 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD09_RS07840 SM00866 BJD09_RS07840 BJD09_RS07885 SM00564 beta-propeller repeat BJD09_RS07890 SM00434 DNA Topoisomerase IV BJD09_RS07915 SM00292 breast cancer carboxy-terminal domain BJD09_RS07915 SM00532 Ligase N family BJD09_RS07930 SM00771 ZipA, C-terminal domain (FtsZ-binding) BJD09_RS07935 SM00968 SMC proteins Flexible Hinge Domain BJD09_RS08005 SM00421 helix_turn_helix, Lux Regulon BJD09_RS08005 SM00448 cheY-homologous receiver domain BJD09_RS08050 SM00947 Carbonic anhydrase BJD09_RS08080 SM00479 BJD09_RS08080 BJD09_RS08110 SM00981 BJD09_RS08110 BJD09_RS08120 SM00382 ATPases associated with a variety of cellular activities BJD09_RS08140 SM00644 BJD09_RS08140 BJD09_RS08150 SM00450 Rhodanese Homology Domain BJD09_RS08175 SM00478 endonuclease III BJD09_RS08185 SM00947 Carbonic anhydrase BJD09_RS08220 SM00382 ATPases associated with a variety of cellular activities BJD09_RS08235 SM00479 BJD09_RS08235 BJD09_RS08240 SM00267 diguanylate cyclase BJD09_RS08245 SM00967 RNA 2'-O ribose methyltransferase substrate binding BJD09_RS08255 SM00316 Ribosomal protein S1-like RNA-binding domain BJD09_RS08255 SM00357 Cold shock protein domain BJD09_RS08255 SM00955 BJD09_RS08255 BJD09_RS08295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BJD09_RS08305 SM01018 B12 binding domain BJD09_RS08325 SM00354 helix_turn _helix lactose operon repressor BJD09_RS08345 SM00984 UDP binding domain BJD09_RS08365 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD09_RS08370 SM00382 ATPases associated with a variety of cellular activities BJD09_RS08400 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS08400 SM01091 Transporter associated domain BJD09_RS08420 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BJD09_RS08430 SM00861 Transketolase, pyrimidine binding domain BJD09_RS08455 SM00382 ATPases associated with a variety of cellular activities BJD09_RS08500 SM00271 DnaJ molecular chaperone homology domain BJD09_RS08600 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS08630 SM00528 Domain in histone-like proteins of HNS family BJD09_RS08645 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS08670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS08670 SM00267 diguanylate cyclase BJD09_RS08680 SM00267 diguanylate cyclase BJD09_RS08810 SM00357 Cold shock protein domain BJD09_RS08825 SM00947 Carbonic anhydrase BJD09_RS08840 SM00382 ATPases associated with a variety of cellular activities BJD09_RS08865 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS08895 SM00631 BJD09_RS08895 BJD09_RS08900 SM01217 BJD09_RS08900 BJD09_RS08925 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS08930 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS08935 SM00434 DNA Topoisomerase IV BJD09_RS08970 SM00710 Parallel beta-helix repeats BJD09_RS08970 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BJD09_RS08975 SM01172 BJD09_RS08975 BJD09_RS08995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD09_RS09005 SM00972 Spore Coat Protein U domain BJD09_RS09020 SM00972 Spore Coat Protein U domain BJD09_RS09045 SM00267 diguanylate cyclase BJD09_RS09075 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD09_RS09115 SM00481 DNA polymerase alpha chain like domain BJD09_RS09200 SM00382 ATPases associated with a variety of cellular activities BJD09_RS09410 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BJD09_RS09415 SM00869 Autotransporter beta-domain BJD09_RS09440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS09440 SM00267 diguanylate cyclase BJD09_RS09470 SM00487 DEAD-like helicases superfamily BJD09_RS09470 SM00490 helicase superfamily c-terminal domain BJD09_RS09485 SM00357 Cold shock protein domain BJD09_RS09520 SM01118 BJD09_RS09520 BJD09_RS09530 SM00448 cheY-homologous receiver domain BJD09_RS09545 SM00358 Double-stranded RNA binding motif BJD09_RS09545 SM00535 Ribonuclease III family BJD09_RS09560 SM00838 Elongation factor G C-terminus BJD09_RS09565 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD09_RS09615 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS09640 SM00812 Alpha-L-fucosidase BJD09_RS09675 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BJD09_RS09675 SM00534 ATPase domain of DNA mismatch repair MUTS family BJD09_RS09745 SM00382 ATPases associated with a variety of cellular activities BJD09_RS09745 SM00962 SRP54-type protein, GTPase domain BJD09_RS09745 SM00963 SRP54-type protein, helical bundle domain BJD09_RS09760 SM00813 Alpha-L-arabinofuranosidase C-terminus BJD09_RS09770 SM00448 cheY-homologous receiver domain BJD09_RS09775 SM00091 PAS domain BJD09_RS09775 SM00387 Histidine kinase-like ATPases BJD09_RS09775 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS09780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS09780 SM00387 Histidine kinase-like ATPases BJD09_RS09780 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS09780 SM00448 cheY-homologous receiver domain BJD09_RS09785 SM00138 Methyltransferase, chemotaxis proteins BJD09_RS09795 SM00387 Histidine kinase-like ATPases BJD09_RS09795 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS09795 SM00448 cheY-homologous receiver domain BJD09_RS09820 SM00387 Histidine kinase-like ATPases BJD09_RS09820 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS09820 SM00448 cheY-homologous receiver domain BJD09_RS09825 SM00387 Histidine kinase-like ATPases BJD09_RS09825 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS09865 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS09870 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS09880 SM00382 ATPases associated with a variety of cellular activities BJD09_RS09885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD09_RS09930 SM00904 Riboflavin kinase BJD09_RS10015 SM00244 prohibitin homologues BJD09_RS10040 SM00478 endonuclease III BJD09_RS10055 SM00421 helix_turn_helix, Lux Regulon BJD09_RS10055 SM00448 cheY-homologous receiver domain BJD09_RS10095 SM00387 Histidine kinase-like ATPases BJD09_RS10095 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS10100 SM00448 cheY-homologous receiver domain BJD09_RS10100 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS10150 SM01060 BJD09_RS10150 BJD09_RS10165 SM00091 PAS domain BJD09_RS10165 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS10205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD09_RS10220 SM00481 DNA polymerase alpha chain like domain BJD09_RS10240 SM00966 SpoVT / AbrB like domain BJD09_RS10260 SM00974 BJD09_RS10260 BJD09_RS10275 SM01092 CO dehydrogenase flavoprotein C-terminal domain BJD09_RS10280 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJD09_RS10290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD09_RS10295 SM00052 Putative diguanylate phosphodiesterase BJD09_RS10355 SM00855 Phosphoglycerate mutase family BJD09_RS10375 SM00220 Serine/Threonine protein kinases, catalytic domain BJD09_RS10435 SM00822 BJD09_RS10435 BJD09_RS10445 SM00788 Adenylosuccinate synthetase BJD09_RS10455 SM01321 BJD09_RS10455 BJD09_RS10460 SM00244 prohibitin homologues BJD09_RS10465 SM00244 prohibitin homologues BJD09_RS10470 SM00448 cheY-homologous receiver domain BJD09_RS10475 SM00271 DnaJ molecular chaperone homology domain BJD09_RS10515 SM01359 BJD09_RS10515 BJD09_RS10515 SM01360 BJD09_RS10515 BJD09_RS10565 SM00382 ATPases associated with a variety of cellular activities BJD09_RS10600 SM00825 Beta-ketoacyl synthase BJD09_RS10610 SM00822 BJD09_RS10610 BJD09_RS10615 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BJD09_RS10665 SM00382 ATPases associated with a variety of cellular activities BJD09_RS10675 SM00460 Transglutaminase/protease-like homologues BJD09_RS10690 SM00493 BJD09_RS10690 BJD09_RS10700 SM00382 ATPases associated with a variety of cellular activities BJD09_RS10770 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS10775 SM00849 Metallo-beta-lactamase superfamily BJD09_RS10800 SM00331 Sigma factor PP2C-like phosphatases BJD09_RS10800 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BJD09_RS10805 SM00479 BJD09_RS10805 BJD09_RS10820 SM00849 Metallo-beta-lactamase superfamily BJD09_RS10825 SM00257 Lysin motif BJD09_RS10845 SM00411 bacterial (prokaryotic) histone like domain BJD09_RS10850 SM00382 ATPases associated with a variety of cellular activities BJD09_RS10850 SM00464 Found in ATP-dependent protease La (LON) BJD09_RS10855 SM00382 ATPases associated with a variety of cellular activities BJD09_RS10855 SM00994 ClpX C4-type zinc finger BJD09_RS10855 SM01086 C-terminal, D2-small domain, of ClpB protein BJD09_RS11025 SM01329 BJD09_RS11025 BJD09_RS11045 SM00448 cheY-homologous receiver domain BJD09_RS11045 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS11050 SM00091 PAS domain BJD09_RS11050 SM00387 Histidine kinase-like ATPases BJD09_RS11050 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS11070 SM00014 Acid phosphatase homologues BJD09_RS11120 SM00855 Phosphoglycerate mutase family BJD09_RS11150 SM00829 Enoylreductase BJD09_RS11160 SM00382 ATPases associated with a variety of cellular activities BJD09_RS11210 SM00829 Enoylreductase BJD09_RS11245 SM00838 Elongation factor G C-terminus BJD09_RS11295 SM00662 RNA polymerases D BJD09_RS11300 SM00363 S4 RNA-binding domain BJD09_RS11300 SM01390 BJD09_RS11300 BJD09_RS11360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BJD09_RS11365 SM01374 BJD09_RS11365 BJD09_RS11385 SM00322 K homology RNA-binding domain BJD09_RS11400 SM01382 BJD09_RS11400 BJD09_RS11400 SM01383 BJD09_RS11400 BJD09_RS11420 SM01403 BJD09_RS11420 BJD09_RS11430 SM00838 Elongation factor G C-terminus BJD09_RS11430 SM00889 Elongation factor G, domain IV BJD09_RS11445 SM00663 RNA polymerase I subunit A N-terminus BJD09_RS11470 SM00649 Ribosomal protein L11/L12 BJD09_RS11475 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BJD09_RS11475 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BJD09_RS11525 SM01400 BJD09_RS11525 BJD09_RS11545 SM00028 Tetratricopeptide repeats BJD09_RS11555 SM00937 BJD09_RS11555 BJD09_RS11565 SM00852 Probable molybdopterin binding domain BJD09_RS11705 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BJD09_RS11705 SM00475 5'-3' exonuclease BJD09_RS11775 SM00421 helix_turn_helix, Lux Regulon BJD09_RS11780 SM00387 Histidine kinase-like ATPases BJD09_RS11780 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS11780 SM00448 cheY-homologous receiver domain BJD09_RS11785 SM00448 cheY-homologous receiver domain BJD09_RS11865 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS11900 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD09_RS11900 SM00895 BJD09_RS11900 BJD09_RS11950 SM00108 Bulb-type mannose-specific lectin BJD09_RS11975 SM00650 Ribosomal RNA adenine dimethylases BJD09_RS11990 SM00382 ATPases associated with a variety of cellular activities BJD09_RS12050 SM00382 ATPases associated with a variety of cellular activities BJD09_RS12060 SM00382 ATPases associated with a variety of cellular activities BJD09_RS12110 SM00387 Histidine kinase-like ATPases BJD09_RS12110 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS12115 SM00448 cheY-homologous receiver domain BJD09_RS12115 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS12125 SM00382 ATPases associated with a variety of cellular activities BJD09_RS12145 SM00382 ATPases associated with a variety of cellular activities BJD09_RS12280 SM00996 S-adenosyl-L-homocysteine hydrolase BJD09_RS12280 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BJD09_RS12320 SM00642 Alpha-amylase domain BJD09_RS12345 SM00944 Pro-kumamolisin, activation domain BJD09_RS12350 SM00829 Enoylreductase BJD09_RS12380 SM00957 SecA DEAD-like domain BJD09_RS12380 SM00958 SecA preprotein cross-linking domain BJD09_RS12400 SM00864 Tubulin/FtsZ family, GTPase domain BJD09_RS12400 SM00865 Tubulin/FtsZ family, C-terminal domain BJD09_RS12405 SM00842 Cell division protein FtsA BJD09_RS12520 SM00448 cheY-homologous receiver domain BJD09_RS12520 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS12525 SM00387 Histidine kinase-like ATPases BJD09_RS12525 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS12555 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BJD09_RS12620 SM00382 ATPases associated with a variety of cellular activities BJD09_RS12640 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD09_RS12660 SM00829 Enoylreductase BJD09_RS12680 SM00448 cheY-homologous receiver domain BJD09_RS12680 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS12685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS12685 SM00387 Histidine kinase-like ATPases BJD09_RS12685 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS12700 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS12705 SM00849 Metallo-beta-lactamase superfamily BJD09_RS12775 SM00354 helix_turn _helix lactose operon repressor BJD09_RS12785 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD09_RS12785 SM00866 BJD09_RS12785 BJD09_RS12855 SM00382 ATPases associated with a variety of cellular activities BJD09_RS12880 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BJD09_RS12915 SM00387 Histidine kinase-like ATPases BJD09_RS12915 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS12915 SM00448 cheY-homologous receiver domain BJD09_RS12920 SM00448 cheY-homologous receiver domain BJD09_RS12925 SM00387 Histidine kinase-like ATPases BJD09_RS12925 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS12930 SM00749 bacterial OsmY and nodulation domain BJD09_RS12940 SM01350 BJD09_RS12940 BJD09_RS12995 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD09_RS12995 SM00245 tail specific protease BJD09_RS13000 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS13020 SM00936 Penicillin-binding protein 5, C-terminal domain BJD09_RS13040 SM00710 Parallel beta-helix repeats BJD09_RS13065 SM00268 Actin BJD09_RS13075 SM00382 ATPases associated with a variety of cellular activities BJD09_RS13085 SM00829 Enoylreductase BJD09_RS13100 SM00062 Bacterial periplasmic substrate-binding proteins BJD09_RS13100 SM00248 ankyrin repeats BJD09_RS13105 SM00564 beta-propeller repeat BJD09_RS13125 SM01263 BJD09_RS13125 BJD09_RS13130 SM00267 diguanylate cyclase BJD09_RS13160 SM00382 ATPases associated with a variety of cellular activities BJD09_RS13160 SM01086 C-terminal, D2-small domain, of ClpB protein BJD09_RS13250 SM00448 cheY-homologous receiver domain BJD09_RS13250 SM00850 LytTr DNA-binding domain BJD09_RS13285 SM00267 diguanylate cyclase BJD09_RS13300 SM00637 BJD09_RS13300 BJD09_RS13305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS13305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS13305 SM01049 BJD09_RS13305 BJD09_RS13310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS13310 SM00091 PAS domain BJD09_RS13310 SM00267 diguanylate cyclase BJD09_RS13320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS13340 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD09_RS13340 SM01232 BJD09_RS13340 BJD09_RS13385 SM00062 Bacterial periplasmic substrate-binding proteins BJD09_RS13415 SM00267 diguanylate cyclase BJD09_RS13485 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS13530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS13530 SM00331 Sigma factor PP2C-like phosphatases BJD09_RS13550 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD09_RS13550 SM00895 BJD09_RS13550 BJD09_RS13560 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BJD09_RS13615 SM00867 YceI-like domain BJD09_RS13630 SM00944 Pro-kumamolisin, activation domain BJD09_RS13690 SM00883 Chaperonin 10 Kd subunit BJD09_RS13720 SM00234 in StAR and phosphatidylcholine transfer protein BJD09_RS13730 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS13760 SM00878 Biotin carboxylase C-terminal domain BJD09_RS13790 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS13810 SM00563 Phosphate acyltransferases BJD09_RS13830 SM00195 Dual specificity phosphatase, catalytic domain BJD09_RS13845 SM00798 AICARFT/IMPCHase bienzyme BJD09_RS13845 SM00851 MGS-like domain BJD09_RS13855 SM01209 BJD09_RS13855 BJD09_RS13855 SM01210 BJD09_RS13855 BJD09_RS13880 SM00563 Phosphate acyltransferases BJD09_RS13950 SM00052 Putative diguanylate phosphodiesterase BJD09_RS13950 SM00267 diguanylate cyclase BJD09_RS13950 SM00448 cheY-homologous receiver domain BJD09_RS13955 SM00387 Histidine kinase-like ATPases BJD09_RS13955 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS13955 SM00448 cheY-homologous receiver domain BJD09_RS14010 SM00100 Cyclic nucleotide-monophosphate binding domain BJD09_RS14010 SM00419 helix_turn_helix, cAMP Regulatory protein BJD09_RS14030 SM00903 Flavin reductase like domain BJD09_RS14050 SM00046 Diacylglycerol kinase catalytic domain (presumed) BJD09_RS14070 SM00271 DnaJ molecular chaperone homology domain BJD09_RS14180 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS14200 SM00237 Domains in Na-Ca exchangers and integrin-beta4 BJD09_RS14210 SM00861 Transketolase, pyrimidine binding domain BJD09_RS14215 SM00326 Src homology 3 domains BJD09_RS14225 SM00487 DEAD-like helicases superfamily BJD09_RS14225 SM00490 helicase superfamily c-terminal domain BJD09_RS14235 SM00822 BJD09_RS14235 BJD09_RS14285 SM00642 Alpha-amylase domain BJD09_RS14295 SM00642 Alpha-amylase domain BJD09_RS14305 SM00642 Alpha-amylase domain BJD09_RS14310 SM00642 Alpha-amylase domain BJD09_RS14320 SM00267 diguanylate cyclase BJD09_RS14385 SM00382 ATPases associated with a variety of cellular activities BJD09_RS14485 SM00369 Leucine-rich repeats, typical (most populated) subfamily BJD09_RS14510 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS14510 SM00876 Biotin and Thiamin Synthesis associated domain BJD09_RS14565 SM01228 BJD09_RS14565 BJD09_RS14580 SM00090 RIO-like kinase BJD09_RS14585 SM00346 helix_turn_helix isocitrate lyase regulation BJD09_RS14605 SM00998 Adenylosuccinate lyase C-terminus BJD09_RS14625 SM00882 Coenzyme A transferase BJD09_RS14630 SM00882 Coenzyme A transferase BJD09_RS14645 SM00420 helix_turn_helix, Deoxyribose operon repressor BJD09_RS14645 SM01134 BJD09_RS14645 BJD09_RS14675 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS14695 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS14700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD09_RS14845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS14845 SM00387 Histidine kinase-like ATPases BJD09_RS14845 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS14850 SM00448 cheY-homologous receiver domain BJD09_RS14850 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS14885 SM00422 helix_turn_helix, mercury resistance BJD09_RS15020 SM00487 DEAD-like helicases superfamily BJD09_RS15020 SM00490 helicase superfamily c-terminal domain BJD09_RS15020 SM00847 Helicase associated domain (HA2) Add an annotation BJD09_RS15050 SM00829 Enoylreductase BJD09_RS15085 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS15110 SM00833 Cobalamin synthesis protein cobW C-terminal domain BJD09_RS15155 SM00953 BJD09_RS15155 BJD09_RS15180 SM00878 Biotin carboxylase C-terminal domain BJD09_RS15205 SM00100 Cyclic nucleotide-monophosphate binding domain BJD09_RS15205 SM00267 diguanylate cyclase BJD09_RS15230 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS15265 SM00563 Phosphate acyltransferases BJD09_RS15380 SM00382 ATPases associated with a variety of cellular activities BJD09_RS15380 SM00448 cheY-homologous receiver domain BJD09_RS15385 SM00387 Histidine kinase-like ATPases BJD09_RS15385 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS15415 SM00450 Rhodanese Homology Domain BJD09_RS15480 SM00382 ATPases associated with a variety of cellular activities BJD09_RS15480 SM00448 cheY-homologous receiver domain BJD09_RS15485 SM00387 Histidine kinase-like ATPases BJD09_RS15485 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS15495 SM00938 Nitrogen regulatory protein P-II BJD09_RS15500 SM01230 BJD09_RS15500 BJD09_RS15520 SM00829 Enoylreductase BJD09_RS15530 SM00028 Tetratricopeptide repeats BJD09_RS15545 SM00563 Phosphate acyltransferases BJD09_RS15555 SM00155 Phospholipase D. Active site motifs. BJD09_RS15560 SM00867 YceI-like domain BJD09_RS15565 SM00855 Phosphoglycerate mutase family BJD09_RS15595 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS15630 SM00382 ATPases associated with a variety of cellular activities BJD09_RS15645 SM00382 ATPases associated with a variety of cellular activities BJD09_RS15665 SM00344 helix_turn_helix ASNC type BJD09_RS15710 SM00354 helix_turn _helix lactose operon repressor BJD09_RS15765 SM00642 Alpha-amylase domain BJD09_RS15770 SM00642 Alpha-amylase domain BJD09_RS15775 SM00642 Alpha-amylase domain BJD09_RS15865 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS15885 SM00421 helix_turn_helix, Lux Regulon BJD09_RS15885 SM00448 cheY-homologous receiver domain BJD09_RS15910 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BJD09_RS16180 SM00822 BJD09_RS16180 BJD09_RS16185 SM00822 BJD09_RS16185 BJD09_RS16210 SM00487 DEAD-like helicases superfamily BJD09_RS16210 SM00490 helicase superfamily c-terminal domain BJD09_RS16335 SM00382 ATPases associated with a variety of cellular activities BJD09_RS16470 SM00829 Enoylreductase BJD09_RS16520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD09_RS16520 SM00245 tail specific protease BJD09_RS16550 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS16565 SM00155 Phospholipase D. Active site motifs. BJD09_RS16600 SM00028 Tetratricopeptide repeats BJD09_RS16615 SM00387 Histidine kinase-like ATPases BJD09_RS16615 SM00433 TopoisomeraseII BJD09_RS16625 SM00480 DNA polymerase III beta subunit BJD09_RS16630 SM00382 ATPases associated with a variety of cellular activities BJD09_RS16630 SM00760 Bacterial dnaA protein helix-turn-helix domain BJD09_RS16655 SM00028 Tetratricopeptide repeats BJD09_RS16665 SM00014 Acid phosphatase homologues BJD09_RS16700 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BJD09_RS16730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS16730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS16730 SM00091 PAS domain BJD09_RS16730 SM00267 diguanylate cyclase BJD09_RS16780 SM00829 Enoylreductase BJD09_RS16830 SM00382 ATPases associated with a variety of cellular activities BJD09_RS16890 SM00796 Allophanate hydrolase subunit 1 BJD09_RS16890 SM00797 Allophanate hydrolase subunit 2 BJD09_RS16890 SM00878 Biotin carboxylase C-terminal domain BJD09_RS16990 SM00155 Phospholipase D. Active site motifs. BJD09_RS17025 SM00347 helix_turn_helix multiple antibiotic resistance protein BJD09_RS17080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS17080 SM00091 PAS domain BJD09_RS17120 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD09_RS17120 SM01232 BJD09_RS17120 BJD09_RS17135 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS17135 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS17175 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BJD09_RS17195 SM00354 helix_turn _helix lactose operon repressor BJD09_RS17205 SM00563 Phosphate acyltransferases BJD09_RS17210 SM00829 Enoylreductase BJD09_RS17285 SM00633 Glycosyl hydrolase family 10 BJD09_RS17310 SM00633 Glycosyl hydrolase family 10 BJD09_RS17340 SM01007 Class II Aldolase and Adducin N-terminal domain BJD09_RS17370 SM00612 BJD09_RS17370 BJD09_RS17395 SM00758 BJD09_RS17395 BJD09_RS17395 SM01217 BJD09_RS17395 BJD09_RS17405 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BJD09_RS17420 SM00354 helix_turn _helix lactose operon repressor BJD09_RS17510 SM00382 ATPases associated with a variety of cellular activities BJD09_RS17520 SM00836 DALR anticodon binding domain BJD09_RS17525 SM00382 ATPases associated with a variety of cellular activities BJD09_RS17575 SM00564 beta-propeller repeat BJD09_RS17610 SM00091 PAS domain BJD09_RS17610 SM00387 Histidine kinase-like ATPases BJD09_RS17610 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS17610 SM00448 cheY-homologous receiver domain BJD09_RS17620 SM00346 helix_turn_helix isocitrate lyase regulation BJD09_RS17640 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BJD09_RS17700 SM00421 helix_turn_helix, Lux Regulon BJD09_RS17700 SM00448 cheY-homologous receiver domain BJD09_RS17840 SM00155 Phospholipase D. Active site motifs. BJD09_RS17860 SM01266 BJD09_RS17860 BJD09_RS17870 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS17910 SM00382 ATPases associated with a variety of cellular activities BJD09_RS17910 SM01086 C-terminal, D2-small domain, of ClpB protein BJD09_RS17940 SM00915 Jacalin-like lectin domain BJD09_RS17950 SM00965 Secretin and TonB N terminus short domain BJD09_RS17975 SM00220 Serine/Threonine protein kinases, catalytic domain BJD09_RS17985 SM00028 Tetratricopeptide repeats BJD09_RS18000 SM00240 Forkhead associated domain BJD09_RS18025 SM00331 Sigma factor PP2C-like phosphatases BJD09_RS18025 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BJD09_RS18045 SM00912 haemagglutination activity domain BJD09_RS18060 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BJD09_RS18060 SM00474 3'-5' exonuclease BJD09_RS18060 SM00475 5'-3' exonuclease BJD09_RS18060 SM00482 DNA polymerase A domain BJD09_RS18130 SM00563 Phosphate acyltransferases BJD09_RS18175 SM00822 BJD09_RS18175 BJD09_RS18205 SM00825 Beta-ketoacyl synthase BJD09_RS18215 SM00248 ankyrin repeats BJD09_RS18250 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS18250 SM00924 MgtE intracellular N domain BJD09_RS18255 SM00881 CoA binding domain BJD09_RS18330 SM00382 ATPases associated with a variety of cellular activities BJD09_RS18340 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS18380 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS18390 SM00382 ATPases associated with a variety of cellular activities BJD09_RS18410 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BJD09_RS18460 SM01004 Delta-aminolevulinic acid dehydratase BJD09_RS18480 SM00477 DNA/RNA non-specific endonuclease BJD09_RS18480 SM00892 DNA/RNA non-specific endonuclease BJD09_RS18510 SM00491 BJD09_RS18510 BJD09_RS18520 SM01060 BJD09_RS18520 BJD09_RS18525 SM01060 BJD09_RS18525 BJD09_RS18530 SM00248 ankyrin repeats BJD09_RS18560 SM00448 cheY-homologous receiver domain BJD09_RS18560 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS18565 SM00387 Histidine kinase-like ATPases BJD09_RS18565 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS18640 SM00960 Roadblock/LC7 domain BJD09_RS18670 SM00849 Metallo-beta-lactamase superfamily BJD09_RS18715 SM00382 ATPases associated with a variety of cellular activities BJD09_RS18730 SM00421 helix_turn_helix, Lux Regulon BJD09_RS18730 SM00448 cheY-homologous receiver domain BJD09_RS18745 SM01060 BJD09_RS18745 BJD09_RS18790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BJD09_RS18820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS18820 SM00387 Histidine kinase-like ATPases BJD09_RS18820 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS18825 SM00448 cheY-homologous receiver domain BJD09_RS18825 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS18870 SM00244 prohibitin homologues BJD09_RS18905 SM00052 Putative diguanylate phosphodiesterase BJD09_RS18920 SM00382 ATPases associated with a variety of cellular activities BJD09_RS18930 SM00938 Nitrogen regulatory protein P-II BJD09_RS18970 SM00823 Phosphopantetheine attachment site BJD09_RS18970 SM00824 Thioesterase BJD09_RS19000 SM00836 DALR anticodon binding domain BJD09_RS19000 SM01016 Arginyl tRNA synthetase N terminal dom BJD09_RS19030 SM01259 BJD09_RS19030 BJD09_RS19055 SM00470 ParB-like nuclease domain BJD09_RS19100 SM00363 S4 RNA-binding domain BJD09_RS19205 SM00400 zinc finger BJD09_RS19205 SM00493 BJD09_RS19205 BJD09_RS19205 SM00766 DNA primase DnaG DnaB-binding BJD09_RS19235 SM00905 Dihydroneopterin aldolase BJD09_RS19240 SM01217 BJD09_RS19240 BJD09_RS19275 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BJD09_RS19285 SM00644 BJD09_RS19285 BJD09_RS19335 SM01150 BJD09_RS19335 BJD09_RS19365 SM00257 Lysin motif BJD09_RS19405 SM00487 DEAD-like helicases superfamily BJD09_RS19435 SM00357 Cold shock protein domain BJD09_RS19435 SM00382 ATPases associated with a variety of cellular activities BJD09_RS19435 SM00959 Rho termination factor, N-terminal domain BJD09_RS19445 SM00487 DEAD-like helicases superfamily BJD09_RS19445 SM00490 helicase superfamily c-terminal domain BJD09_RS19450 SM00382 ATPases associated with a variety of cellular activities BJD09_RS19460 SM00448 cheY-homologous receiver domain BJD09_RS19465 SM00986 Uracil DNA glycosylase superfamily BJD09_RS19465 SM00987 UreE urease accessory protein, C-terminal domain BJD09_RS19500 SM00487 DEAD-like helicases superfamily BJD09_RS19500 SM00490 helicase superfamily c-terminal domain BJD09_RS19555 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BJD09_RS19555 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BJD09_RS19555 SM00493 BJD09_RS19555 BJD09_RS19580 SM00257 Lysin motif BJD09_RS19755 SM00477 DNA/RNA non-specific endonuclease BJD09_RS19755 SM00892 DNA/RNA non-specific endonuclease BJD09_RS19760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS19760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS19805 SM00631 BJD09_RS19805 BJD09_RS19810 SM00382 ATPases associated with a variety of cellular activities BJD09_RS19885 SM00382 ATPases associated with a variety of cellular activities BJD09_RS19945 SM00382 ATPases associated with a variety of cellular activities BJD09_RS19945 SM00448 cheY-homologous receiver domain BJD09_RS19955 SM00448 cheY-homologous receiver domain BJD09_RS19960 SM00091 PAS domain BJD09_RS19960 SM00138 Methyltransferase, chemotaxis proteins BJD09_RS19960 SM00911 HWE histidine kinase BJD09_RS20010 SM00387 Histidine kinase-like ATPases BJD09_RS20015 SM00448 cheY-homologous receiver domain BJD09_RS20015 SM00850 LytTr DNA-binding domain BJD09_RS20085 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS20090 SM00986 Uracil DNA glycosylase superfamily BJD09_RS20090 SM00987 UreE urease accessory protein, C-terminal domain BJD09_RS20095 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BJD09_RS20110 SM00382 ATPases associated with a variety of cellular activities BJD09_RS20170 SM00344 helix_turn_helix ASNC type BJD09_RS20180 SM01005 Alanine racemase, C-terminal domain BJD09_RS20200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS20200 SM00091 PAS domain BJD09_RS20200 SM00387 Histidine kinase-like ATPases BJD09_RS20200 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS20200 SM00448 cheY-homologous receiver domain BJD09_RS20250 SM00387 Histidine kinase-like ATPases BJD09_RS20250 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS20250 SM00448 cheY-homologous receiver domain BJD09_RS20270 SM00382 ATPases associated with a variety of cellular activities BJD09_RS20270 SM00930 BJD09_RS20270 BJD09_RS20305 SM00986 Uracil DNA glycosylase superfamily BJD09_RS20305 SM00987 UreE urease accessory protein, C-terminal domain BJD09_RS20375 SM00382 ATPases associated with a variety of cellular activities BJD09_RS20385 SM00830 Chorismate mutase type II BJD09_RS20400 SM00387 Histidine kinase-like ATPases BJD09_RS20405 SM00382 ATPases associated with a variety of cellular activities BJD09_RS20405 SM00448 cheY-homologous receiver domain BJD09_RS20425 SM00382 ATPases associated with a variety of cellular activities BJD09_RS20500 SM00825 Beta-ketoacyl synthase BJD09_RS20535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS20570 SM00487 DEAD-like helicases superfamily BJD09_RS20570 SM00490 helicase superfamily c-terminal domain BJD09_RS20615 SM00116 Domain in cystathionine beta-synthase and other proteins. BJD09_RS20630 SM00382 ATPases associated with a variety of cellular activities BJD09_RS20700 SM00893 Electron transfer flavoprotein domain BJD09_RS20705 SM00893 Electron transfer flavoprotein domain BJD09_RS20730 SM00984 UDP binding domain BJD09_RS20750 SM00882 Coenzyme A transferase BJD09_RS20755 SM00882 Coenzyme A transferase BJD09_RS20785 SM00382 ATPases associated with a variety of cellular activities BJD09_RS20800 SM00528 Domain in histone-like proteins of HNS family BJD09_RS20830 SM00656 BJD09_RS20830 BJD09_RS20910 SM01211 BJD09_RS20910 BJD09_RS20940 SM00382 ATPases associated with a variety of cellular activities BJD09_RS21005 SM00345 helix_turn_helix gluconate operon transcriptional repressor BJD09_RS21005 SM00866 BJD09_RS21005 BJD09_RS21090 SM00028 Tetratricopeptide repeats BJD09_RS21170 SM00450 Rhodanese Homology Domain BJD09_RS21215 SM01154 BJD09_RS21215 BJD09_RS21225 SM00642 Alpha-amylase domain BJD09_RS21240 SM00354 helix_turn _helix lactose operon repressor BJD09_RS21245 SM00822 BJD09_RS21245 BJD09_RS21265 SM00448 cheY-homologous receiver domain BJD09_RS21265 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS21270 SM00387 Histidine kinase-like ATPases BJD09_RS21270 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS21285 SM00421 helix_turn_helix, Lux Regulon BJD09_RS21285 SM00448 cheY-homologous receiver domain BJD09_RS21325 SM00387 Histidine kinase-like ATPases BJD09_RS21325 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS21325 SM00448 cheY-homologous receiver domain BJD09_RS21340 SM00919 Malic enzyme, NAD binding domain BJD09_RS21340 SM01274 BJD09_RS21340 BJD09_RS21395 SM00267 diguanylate cyclase BJD09_RS21415 SM01329 BJD09_RS21415 BJD09_RS21450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS21470 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS21475 SM00342 helix_turn_helix, arabinose operon control protein BJD09_RS21525 SM00464 Found in ATP-dependent protease La (LON) BJD09_RS21600 SM00028 Tetratricopeptide repeats BJD09_RS21600 SM00382 ATPases associated with a variety of cellular activities BJD09_RS21600 SM00421 helix_turn_helix, Lux Regulon BJD09_RS21675 SM01011 Aminopeptidase P, N-terminal domain BJD09_RS21700 SM00729 Elongator protein 3, MiaB family, Radical SAM BJD09_RS21725 SM00072 Guanylate kinase homologues. BJD09_RS21730 SM01409 BJD09_RS21730 BJD09_RS21735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BJD09_RS21735 SM00954 Region found in RelA / SpoT proteins BJD09_RS21745 SM00487 DEAD-like helicases superfamily BJD09_RS21745 SM00490 helicase superfamily c-terminal domain BJD09_RS21795 SM00965 Secretin and TonB N terminus short domain BJD09_RS21805 SM00382 ATPases associated with a variety of cellular activities BJD09_RS21820 SM00327 von Willebrand factor (vWF) type A domain BJD09_RS21825 SM00028 Tetratricopeptide repeats BJD09_RS21825 SM00327 von Willebrand factor (vWF) type A domain BJD09_RS21845 SM00861 Transketolase, pyrimidine binding domain BJD09_RS21905 SM00382 ATPases associated with a variety of cellular activities BJD09_RS21920 SM00849 Metallo-beta-lactamase superfamily BJD09_RS21945 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD09_RS22000 SM00506 Appr-1"-p processing enzyme BJD09_RS22035 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BJD09_RS22035 SM00387 Histidine kinase-like ATPases BJD09_RS22135 SM00967 RNA 2'-O ribose methyltransferase substrate binding BJD09_RS22165 SM00354 helix_turn _helix lactose operon repressor BJD09_RS22225 SM00869 Autotransporter beta-domain BJD09_RS22245 SM00255 Toll - interleukin 1 - resistance BJD09_RS22275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BJD09_RS22275 SM00387 Histidine kinase-like ATPases BJD09_RS22295 SM00530 Helix-turn-helix XRE-family like proteins BJD09_RS22340 SM00646 BJD09_RS22340 BJD09_RS22350 SM01034 Sensors of blue-light using FAD BJD09_RS22370 SM00448 cheY-homologous receiver domain BJD09_RS22375 SM00387 Histidine kinase-like ATPases BJD09_RS22375 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS22450 SM00318 Staphylococcal nuclease homologues BJD09_RS22460 SM00528 Domain in histone-like proteins of HNS family BJD09_RS22470 SM00642 Alpha-amylase domain BJD09_RS22485 SM00448 cheY-homologous receiver domain BJD09_RS22485 SM00862 Transcriptional regulatory protein, C terminal BJD09_RS22490 SM00387 Histidine kinase-like ATPases BJD09_RS22490 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS22565 SM00382 ATPases associated with a variety of cellular activities BJD09_RS22565 SM00448 cheY-homologous receiver domain BJD09_RS22570 SM00387 Histidine kinase-like ATPases BJD09_RS22570 SM00388 His Kinase A (phosphoacceptor) domain BJD09_RS22580 SM00881 CoA binding domain BJD09_RS22590 SM01126 BJD09_RS22590 BJD09_RS22700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS22710 SM00564 beta-propeller repeat BJD09_RS22785 SM00062 Bacterial periplasmic substrate-binding proteins BJD09_RS22795 SM00382 ATPases associated with a variety of cellular activities BJD09_RS22800 SM00382 ATPases associated with a variety of cellular activities BJD09_RS22800 SM01086 C-terminal, D2-small domain, of ClpB protein BJD09_RS22850 SM00855 Phosphoglycerate mutase family BJD09_RS22960 SM00382 ATPases associated with a variety of cellular activities BJD09_RS23010 SM00834 Putative regulatory protein BJD09_RS23045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BJD09_RS23060 SM00382 ATPases associated with a variety of cellular activities BJD09_RS23115 SM00091 PAS domain BJD09_RS23115 SM00911 HWE histidine kinase BJD09_RS23120 SM00448 cheY-homologous receiver domain BJD09_RS23135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS23135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BJD09_RS23160 SM00448 cheY-homologous receiver domain BJD09_RS23170 SM00341 Helicase and RNase D C-terminal BJD09_RS23170 SM00487 DEAD-like helicases superfamily BJD09_RS23170 SM00490 helicase superfamily c-terminal domain BJD09_RS23170 SM00956 BJD09_RS23170 BJD09_RS23185 SM00382 ATPases associated with a variety of cellular activities BJD09_RS23185 SM00487 DEAD-like helicases superfamily BJD09_RS23185 SM00490 helicase superfamily c-terminal domain BJD09_RS23185 SM00847 Helicase associated domain (HA2) Add an annotation BJD09_RS23245 SM00954 Region found in RelA / SpoT proteins BJD09_RS23275 SM00491 BJD09_RS23275 BJD09_RS23300 SM00448 cheY-homologous receiver domain BJD09_RS23305 SM00448 cheY-homologous receiver domain BJD09_RS23310 SM00260 Two component signalling adaptor domain BJD09_RS23315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BJD09_RS23345 SM00073 Histidine Phosphotransfer domain BJD09_RS24420 SM00073 Histidine Phosphotransfer domain