AMD16_RS00065 SM00028 Tetratricopeptide repeats AMD16_RS00490 SM00382 ATPases associated with a variety of cellular activities AMD16_RS00490 SM00760 Bacterial dnaA protein helix-turn-helix domain AMD16_RS00495 SM00480 DNA polymerase III beta subunit AMD16_RS00505 SM00387 Histidine kinase-like ATPases AMD16_RS00505 SM00433 TopoisomeraseII AMD16_RS00520 SM00028 Tetratricopeptide repeats AMD16_RS00555 SM00155 Phospholipase D. Active site motifs. AMD16_RS00570 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS00600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD16_RS00600 SM00245 tail specific protease AMD16_RS00640 SM00829 Enoylreductase AMD16_RS00765 SM00382 ATPases associated with a variety of cellular activities AMD16_RS00875 SM00487 DEAD-like helicases superfamily AMD16_RS00875 SM00490 helicase superfamily c-terminal domain AMD16_RS00895 SM00822 AMD16_RS00895 AMD16_RS00900 SM00822 AMD16_RS00900 AMD16_RS01155 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMD16_RS01175 SM00421 helix_turn_helix, Lux Regulon AMD16_RS01175 SM00448 cheY-homologous receiver domain AMD16_RS01195 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS01275 SM00642 Alpha-amylase domain AMD16_RS01280 SM00642 Alpha-amylase domain AMD16_RS01285 SM00642 Alpha-amylase domain AMD16_RS01335 SM00354 helix_turn _helix lactose operon repressor AMD16_RS01375 SM00344 helix_turn_helix ASNC type AMD16_RS01395 SM00382 ATPases associated with a variety of cellular activities AMD16_RS01410 SM00382 ATPases associated with a variety of cellular activities AMD16_RS01445 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS01475 SM00855 Phosphoglycerate mutase family AMD16_RS01480 SM00867 YceI-like domain AMD16_RS01485 SM00155 Phospholipase D. Active site motifs. AMD16_RS01495 SM00563 Phosphate acyltransferases AMD16_RS01510 SM00028 Tetratricopeptide repeats AMD16_RS01520 SM00829 Enoylreductase AMD16_RS01535 SM01230 AMD16_RS01535 AMD16_RS01540 SM00938 Nitrogen regulatory protein P-II AMD16_RS01550 SM00387 Histidine kinase-like ATPases AMD16_RS01550 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS01555 SM00382 ATPases associated with a variety of cellular activities AMD16_RS01555 SM00448 cheY-homologous receiver domain AMD16_RS01615 SM00450 Rhodanese Homology Domain AMD16_RS01640 SM00387 Histidine kinase-like ATPases AMD16_RS01640 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS01645 SM00382 ATPases associated with a variety of cellular activities AMD16_RS01645 SM00448 cheY-homologous receiver domain AMD16_RS01755 SM00563 Phosphate acyltransferases AMD16_RS01790 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS01815 SM00100 Cyclic nucleotide-monophosphate binding domain AMD16_RS01815 SM00267 diguanylate cyclase AMD16_RS01840 SM00878 Biotin carboxylase C-terminal domain AMD16_RS01865 SM00953 AMD16_RS01865 AMD16_RS01905 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMD16_RS01935 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS01970 SM00829 Enoylreductase AMD16_RS02000 SM00487 DEAD-like helicases superfamily AMD16_RS02000 SM00490 helicase superfamily c-terminal domain AMD16_RS02000 SM00847 Helicase associated domain (HA2) Add an annotation AMD16_RS02135 SM00422 helix_turn_helix, mercury resistance AMD16_RS02170 SM00448 cheY-homologous receiver domain AMD16_RS02170 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS02175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS02175 SM00387 Histidine kinase-like ATPases AMD16_RS02175 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS02320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD16_RS02325 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS02345 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS02375 SM00420 helix_turn_helix, Deoxyribose operon repressor AMD16_RS02375 SM01134 AMD16_RS02375 AMD16_RS02390 SM00882 Coenzyme A transferase AMD16_RS02395 SM00882 Coenzyme A transferase AMD16_RS02415 SM00998 Adenylosuccinate lyase C-terminus AMD16_RS02435 SM00346 helix_turn_helix isocitrate lyase regulation AMD16_RS02440 SM00090 RIO-like kinase AMD16_RS02455 SM01228 AMD16_RS02455 AMD16_RS02510 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS02510 SM00876 Biotin and Thiamin Synthesis associated domain AMD16_RS02530 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMD16_RS02625 SM00382 ATPases associated with a variety of cellular activities AMD16_RS02685 SM00267 diguanylate cyclase AMD16_RS02695 SM00642 Alpha-amylase domain AMD16_RS02700 SM00642 Alpha-amylase domain AMD16_RS02710 SM00642 Alpha-amylase domain AMD16_RS02720 SM00642 Alpha-amylase domain AMD16_RS02770 SM00822 AMD16_RS02770 AMD16_RS02780 SM00487 DEAD-like helicases superfamily AMD16_RS02780 SM00490 helicase superfamily c-terminal domain AMD16_RS02790 SM00326 Src homology 3 domains AMD16_RS02795 SM00861 Transketolase, pyrimidine binding domain AMD16_RS02805 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMD16_RS02825 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS02920 SM00271 DnaJ molecular chaperone homology domain AMD16_RS02940 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMD16_RS02960 SM00903 Flavin reductase like domain AMD16_RS02980 SM00100 Cyclic nucleotide-monophosphate binding domain AMD16_RS02980 SM00419 helix_turn_helix, cAMP Regulatory protein AMD16_RS03035 SM00387 Histidine kinase-like ATPases AMD16_RS03035 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS03035 SM00448 cheY-homologous receiver domain AMD16_RS03040 SM00052 Putative diguanylate phosphodiesterase AMD16_RS03040 SM00267 diguanylate cyclase AMD16_RS03040 SM00448 cheY-homologous receiver domain AMD16_RS03105 SM00563 Phosphate acyltransferases AMD16_RS03130 SM01209 AMD16_RS03130 AMD16_RS03130 SM01210 AMD16_RS03130 AMD16_RS03140 SM00798 AICARFT/IMPCHase bienzyme AMD16_RS03140 SM00851 MGS-like domain AMD16_RS03155 SM00195 Dual specificity phosphatase, catalytic domain AMD16_RS03175 SM00563 Phosphate acyltransferases AMD16_RS03200 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS03225 SM00878 Biotin carboxylase C-terminal domain AMD16_RS03255 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS03265 SM00234 in StAR and phosphatidylcholine transfer protein AMD16_RS03285 SM00883 Chaperonin 10 Kd subunit AMD16_RS03345 SM00944 Pro-kumamolisin, activation domain AMD16_RS03360 SM00867 YceI-like domain AMD16_RS03415 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD16_RS03425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD16_RS03425 SM00895 AMD16_RS03425 AMD16_RS03445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS03445 SM00331 Sigma factor PP2C-like phosphatases AMD16_RS03485 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS03550 SM00267 diguanylate cyclase AMD16_RS03580 SM00062 Bacterial periplasmic substrate-binding proteins AMD16_RS03620 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD16_RS03620 SM01232 AMD16_RS03620 AMD16_RS03635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS03645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS03645 SM00091 PAS domain AMD16_RS03645 SM00267 diguanylate cyclase AMD16_RS03650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS03650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS03650 SM01049 AMD16_RS03650 AMD16_RS03655 SM00637 AMD16_RS03655 AMD16_RS03670 SM00267 diguanylate cyclase AMD16_RS03700 SM00448 cheY-homologous receiver domain AMD16_RS03700 SM00850 LytTr DNA-binding domain AMD16_RS03780 SM00382 ATPases associated with a variety of cellular activities AMD16_RS03780 SM01086 C-terminal, D2-small domain, of ClpB protein AMD16_RS03810 SM00267 diguanylate cyclase AMD16_RS03815 SM01263 AMD16_RS03815 AMD16_RS03835 SM00564 beta-propeller repeat AMD16_RS03840 SM00062 Bacterial periplasmic substrate-binding proteins AMD16_RS03840 SM00248 ankyrin repeats AMD16_RS03855 SM00829 Enoylreductase AMD16_RS03865 SM00382 ATPases associated with a variety of cellular activities AMD16_RS03875 SM00268 Actin AMD16_RS03900 SM00710 Parallel beta-helix repeats AMD16_RS03920 SM00936 Penicillin-binding protein 5, C-terminal domain AMD16_RS03940 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS03945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD16_RS03945 SM00245 tail specific protease AMD16_RS04000 SM01350 AMD16_RS04000 AMD16_RS04010 SM00749 bacterial OsmY and nodulation domain AMD16_RS04015 SM00387 Histidine kinase-like ATPases AMD16_RS04015 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS04020 SM00448 cheY-homologous receiver domain AMD16_RS04025 SM00387 Histidine kinase-like ATPases AMD16_RS04025 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS04025 SM00448 cheY-homologous receiver domain AMD16_RS04055 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD16_RS04080 SM00382 ATPases associated with a variety of cellular activities AMD16_RS04150 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD16_RS04150 SM00866 AMD16_RS04150 AMD16_RS04160 SM00354 helix_turn _helix lactose operon repressor AMD16_RS04225 SM00849 Metallo-beta-lactamase superfamily AMD16_RS04230 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS04240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS04240 SM00387 Histidine kinase-like ATPases AMD16_RS04240 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS04245 SM00448 cheY-homologous receiver domain AMD16_RS04245 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS04265 SM00829 Enoylreductase AMD16_RS04285 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD16_RS04305 SM00382 ATPases associated with a variety of cellular activities AMD16_RS04365 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD16_RS04395 SM00387 Histidine kinase-like ATPases AMD16_RS04395 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS04400 SM00448 cheY-homologous receiver domain AMD16_RS04400 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS04510 SM00842 Cell division protein FtsA AMD16_RS04515 SM00864 Tubulin/FtsZ family, GTPase domain AMD16_RS04515 SM00865 Tubulin/FtsZ family, C-terminal domain AMD16_RS04535 SM00957 SecA DEAD-like domain AMD16_RS04535 SM00958 SecA preprotein cross-linking domain AMD16_RS04560 SM00829 Enoylreductase AMD16_RS04565 SM00944 Pro-kumamolisin, activation domain AMD16_RS04580 SM00642 Alpha-amylase domain AMD16_RS04615 SM00996 S-adenosyl-L-homocysteine hydrolase AMD16_RS04615 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD16_RS04730 SM00382 ATPases associated with a variety of cellular activities AMD16_RS04750 SM00382 ATPases associated with a variety of cellular activities AMD16_RS04760 SM00448 cheY-homologous receiver domain AMD16_RS04760 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS04765 SM00387 Histidine kinase-like ATPases AMD16_RS04765 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS04820 SM00382 ATPases associated with a variety of cellular activities AMD16_RS04830 SM00382 ATPases associated with a variety of cellular activities AMD16_RS04890 SM00382 ATPases associated with a variety of cellular activities AMD16_RS04905 SM00650 Ribosomal RNA adenine dimethylases AMD16_RS04970 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD16_RS04970 SM00895 AMD16_RS04970 AMD16_RS05005 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS05080 SM00448 cheY-homologous receiver domain AMD16_RS05085 SM00387 Histidine kinase-like ATPases AMD16_RS05085 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS05085 SM00448 cheY-homologous receiver domain AMD16_RS05090 SM00421 helix_turn_helix, Lux Regulon AMD16_RS05155 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD16_RS05155 SM00475 5'-3' exonuclease AMD16_RS05185 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMD16_RS05185 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMD16_RS05300 SM00852 Probable molybdopterin binding domain AMD16_RS05305 SM00028 Tetratricopeptide repeats AMD16_RS05310 SM00937 AMD16_RS05310 AMD16_RS05320 SM00028 Tetratricopeptide repeats AMD16_RS05340 SM01400 AMD16_RS05340 AMD16_RS05390 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMD16_RS05390 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD16_RS05395 SM00649 Ribosomal protein L11/L12 AMD16_RS05420 SM00663 RNA polymerase I subunit A N-terminus AMD16_RS05435 SM00838 Elongation factor G C-terminus AMD16_RS05435 SM00889 Elongation factor G, domain IV AMD16_RS05445 SM01403 AMD16_RS05445 AMD16_RS05465 SM01382 AMD16_RS05465 AMD16_RS05465 SM01383 AMD16_RS05465 AMD16_RS05480 SM00322 K homology RNA-binding domain AMD16_RS05500 SM01374 AMD16_RS05500 AMD16_RS05505 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD16_RS05565 SM00363 S4 RNA-binding domain AMD16_RS05565 SM01390 AMD16_RS05565 AMD16_RS05570 SM00662 RNA polymerases D AMD16_RS05615 SM00838 Elongation factor G C-terminus AMD16_RS05645 SM00829 Enoylreductase AMD16_RS05695 SM00382 ATPases associated with a variety of cellular activities AMD16_RS05705 SM00829 Enoylreductase AMD16_RS05735 SM00855 Phosphoglycerate mutase family AMD16_RS05785 SM00014 Acid phosphatase homologues AMD16_RS05805 SM00091 PAS domain AMD16_RS05805 SM00387 Histidine kinase-like ATPases AMD16_RS05805 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS05810 SM00448 cheY-homologous receiver domain AMD16_RS05810 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS05830 SM01329 AMD16_RS05830 AMD16_RS05975 SM00387 Histidine kinase-like ATPases AMD16_RS05995 SM00382 ATPases associated with a variety of cellular activities AMD16_RS05995 SM00994 ClpX C4-type zinc finger AMD16_RS05995 SM01086 C-terminal, D2-small domain, of ClpB protein AMD16_RS06000 SM00382 ATPases associated with a variety of cellular activities AMD16_RS06000 SM00464 Found in ATP-dependent protease La (LON) AMD16_RS06005 SM00411 bacterial (prokaryotic) histone like domain AMD16_RS06030 SM00257 Lysin motif AMD16_RS06035 SM00849 Metallo-beta-lactamase superfamily AMD16_RS06050 SM00479 AMD16_RS06050 AMD16_RS06055 SM00331 Sigma factor PP2C-like phosphatases AMD16_RS06055 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD16_RS06080 SM00849 Metallo-beta-lactamase superfamily AMD16_RS06085 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS06155 SM00382 ATPases associated with a variety of cellular activities AMD16_RS06165 SM00493 AMD16_RS06165 AMD16_RS06180 SM00460 Transglutaminase/protease-like homologues AMD16_RS06190 SM00382 ATPases associated with a variety of cellular activities AMD16_RS06235 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD16_RS06240 SM00822 AMD16_RS06240 AMD16_RS06250 SM00825 Beta-ketoacyl synthase AMD16_RS06285 SM00382 ATPases associated with a variety of cellular activities AMD16_RS06325 SM01359 AMD16_RS06325 AMD16_RS06325 SM01360 AMD16_RS06325 AMD16_RS06360 SM00271 DnaJ molecular chaperone homology domain AMD16_RS06365 SM00448 cheY-homologous receiver domain AMD16_RS06370 SM00244 prohibitin homologues AMD16_RS06375 SM00244 prohibitin homologues AMD16_RS06380 SM01321 AMD16_RS06380 AMD16_RS06385 SM00788 Adenylosuccinate synthetase AMD16_RS06400 SM00822 AMD16_RS06400 AMD16_RS06455 SM00220 Serine/Threonine protein kinases, catalytic domain AMD16_RS06475 SM00855 Phosphoglycerate mutase family AMD16_RS06530 SM00052 Putative diguanylate phosphodiesterase AMD16_RS06535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD16_RS06545 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD16_RS06550 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD16_RS06565 SM00974 AMD16_RS06565 AMD16_RS06585 SM00966 SpoVT / AbrB like domain AMD16_RS06605 SM00481 DNA polymerase alpha chain like domain AMD16_RS06615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD16_RS06650 SM00091 PAS domain AMD16_RS06650 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS06665 SM01060 AMD16_RS06665 AMD16_RS06715 SM00448 cheY-homologous receiver domain AMD16_RS06715 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS06720 SM00387 Histidine kinase-like ATPases AMD16_RS06720 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS06760 SM00421 helix_turn_helix, Lux Regulon AMD16_RS06760 SM00448 cheY-homologous receiver domain AMD16_RS06775 SM00478 endonuclease III AMD16_RS06795 SM00244 prohibitin homologues AMD16_RS06880 SM00904 Riboflavin kinase AMD16_RS06925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD16_RS06930 SM00382 ATPases associated with a variety of cellular activities AMD16_RS06940 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS06945 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS06980 SM00387 Histidine kinase-like ATPases AMD16_RS06980 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS06985 SM00387 Histidine kinase-like ATPases AMD16_RS06985 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS06985 SM00448 cheY-homologous receiver domain AMD16_RS07010 SM00387 Histidine kinase-like ATPases AMD16_RS07010 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS07010 SM00448 cheY-homologous receiver domain AMD16_RS07020 SM00138 Methyltransferase, chemotaxis proteins AMD16_RS07025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS07025 SM00387 Histidine kinase-like ATPases AMD16_RS07025 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS07025 SM00448 cheY-homologous receiver domain AMD16_RS07030 SM00091 PAS domain AMD16_RS07030 SM00387 Histidine kinase-like ATPases AMD16_RS07030 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS07035 SM00448 cheY-homologous receiver domain AMD16_RS07045 SM00813 Alpha-L-arabinofuranosidase C-terminus AMD16_RS07065 SM00382 ATPases associated with a variety of cellular activities AMD16_RS07065 SM00962 SRP54-type protein, GTPase domain AMD16_RS07065 SM00963 SRP54-type protein, helical bundle domain AMD16_RS07135 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMD16_RS07135 SM00534 ATPase domain of DNA mismatch repair MUTS family AMD16_RS07155 SM00812 Alpha-L-fucosidase AMD16_RS07180 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS07230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD16_RS07235 SM00838 Elongation factor G C-terminus AMD16_RS07250 SM00358 Double-stranded RNA binding motif AMD16_RS07250 SM00535 Ribonuclease III family AMD16_RS07265 SM00448 cheY-homologous receiver domain AMD16_RS07275 SM01118 AMD16_RS07275 AMD16_RS07310 SM00357 Cold shock protein domain AMD16_RS07325 SM00487 DEAD-like helicases superfamily AMD16_RS07325 SM00490 helicase superfamily c-terminal domain AMD16_RS07355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS07355 SM00267 diguanylate cyclase AMD16_RS07375 SM00869 Autotransporter beta-domain AMD16_RS07380 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD16_RS07385 SM00671 Sel1-like repeats. AMD16_RS07385 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD16_RS07585 SM00382 ATPases associated with a variety of cellular activities AMD16_RS07670 SM00481 DNA polymerase alpha chain like domain AMD16_RS07710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD16_RS07740 SM00267 diguanylate cyclase AMD16_RS07765 SM00972 Spore Coat Protein U domain AMD16_RS07780 SM00972 Spore Coat Protein U domain AMD16_RS07790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD16_RS07810 SM01172 AMD16_RS07810 AMD16_RS07815 SM00710 Parallel beta-helix repeats AMD16_RS07815 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AMD16_RS07850 SM00434 DNA Topoisomerase IV AMD16_RS07855 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS07860 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS07885 SM01217 AMD16_RS07885 AMD16_RS07890 SM00631 AMD16_RS07890 AMD16_RS07920 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS07940 SM00382 ATPases associated with a variety of cellular activities AMD16_RS07955 SM00947 Carbonic anhydrase AMD16_RS07970 SM00357 Cold shock protein domain AMD16_RS08085 SM00267 diguanylate cyclase AMD16_RS08095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS08095 SM00267 diguanylate cyclase AMD16_RS08110 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS08125 SM00528 Domain in histone-like proteins of HNS family AMD16_RS08150 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS08245 SM00271 DnaJ molecular chaperone homology domain AMD16_RS08285 SM00382 ATPases associated with a variety of cellular activities AMD16_RS08310 SM00861 Transketolase, pyrimidine binding domain AMD16_RS08320 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD16_RS08340 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS08340 SM01091 Transporter associated domain AMD16_RS08370 SM00382 ATPases associated with a variety of cellular activities AMD16_RS08375 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD16_RS08390 SM00984 UDP binding domain AMD16_RS08410 SM00354 helix_turn _helix lactose operon repressor AMD16_RS08430 SM01018 B12 binding domain AMD16_RS08440 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMD16_RS08460 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS08460 SM00357 Cold shock protein domain AMD16_RS08460 SM00955 AMD16_RS08460 AMD16_RS08470 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD16_RS08475 SM00267 diguanylate cyclase AMD16_RS08480 SM00479 AMD16_RS08480 AMD16_RS08495 SM00382 ATPases associated with a variety of cellular activities AMD16_RS08530 SM00947 Carbonic anhydrase AMD16_RS08540 SM00478 endonuclease III AMD16_RS08565 SM00450 Rhodanese Homology Domain AMD16_RS08575 SM00644 AMD16_RS08575 AMD16_RS08595 SM00382 ATPases associated with a variety of cellular activities AMD16_RS08600 SM00981 AMD16_RS08600 AMD16_RS08630 SM00479 AMD16_RS08630 AMD16_RS08655 SM00947 Carbonic anhydrase AMD16_RS08700 SM00421 helix_turn_helix, Lux Regulon AMD16_RS08700 SM00448 cheY-homologous receiver domain AMD16_RS08760 SM00968 SMC proteins Flexible Hinge Domain AMD16_RS08765 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMD16_RS08780 SM00292 breast cancer carboxy-terminal domain AMD16_RS08780 SM00532 Ligase N family AMD16_RS08800 SM00434 DNA Topoisomerase IV AMD16_RS08805 SM00564 beta-propeller repeat AMD16_RS08845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD16_RS08845 SM00866 AMD16_RS08845 AMD16_RS08870 SM00240 Forkhead associated domain AMD16_RS08890 SM00830 Chorismate mutase type II AMD16_RS08935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS08935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS08945 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS08960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS08960 SM00091 PAS domain AMD16_RS08960 SM00387 Histidine kinase-like ATPases AMD16_RS08960 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS08960 SM00448 cheY-homologous receiver domain AMD16_RS08965 SM00448 cheY-homologous receiver domain AMD16_RS08970 SM00382 ATPases associated with a variety of cellular activities AMD16_RS08975 SM00091 PAS domain AMD16_RS08975 SM00387 Histidine kinase-like ATPases AMD16_RS08975 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS08975 SM00448 cheY-homologous receiver domain AMD16_RS09130 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS09140 SM00382 ATPases associated with a variety of cellular activities AMD16_RS09165 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS09165 SM01091 Transporter associated domain AMD16_RS09190 SM00387 Histidine kinase-like ATPases AMD16_RS09190 SM00433 TopoisomeraseII AMD16_RS09215 SM01192 AMD16_RS09215 AMD16_RS09215 SM01193 AMD16_RS09215 AMD16_RS09240 SM00463 Small MutS-related domain AMD16_RS09260 SM00257 Lysin motif AMD16_RS09270 SM01103 AMD16_RS09270 AMD16_RS09280 SM00382 ATPases associated with a variety of cellular activities AMD16_RS09320 SM00382 ATPases associated with a variety of cellular activities AMD16_RS09330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD16_RS09345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS09345 SM00091 PAS domain AMD16_RS09345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS09400 SM00670 Large family of predicted nucleotide-binding domains AMD16_RS09420 SM01130 AMD16_RS09420 AMD16_RS09445 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD16_RS09490 SM00758 AMD16_RS09490 AMD16_RS09520 SM00646 AMD16_RS09520 AMD16_RS09590 SM00052 Putative diguanylate phosphodiesterase AMD16_RS09590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS09590 SM00267 diguanylate cyclase AMD16_RS09600 SM00448 cheY-homologous receiver domain AMD16_RS09605 SM00387 Histidine kinase-like ATPases AMD16_RS09615 SM00014 Acid phosphatase homologues AMD16_RS09690 SM00912 haemagglutination activity domain AMD16_RS09735 SM00100 Cyclic nucleotide-monophosphate binding domain AMD16_RS09735 SM00419 helix_turn_helix, cAMP Regulatory protein AMD16_RS09810 SM01007 Class II Aldolase and Adducin N-terminal domain AMD16_RS09855 SM00841 Elongation factor P, C-terminal AMD16_RS09855 SM01185 AMD16_RS09855 AMD16_RS09860 SM00822 AMD16_RS09860 AMD16_RS09880 SM00899 AMD16_RS09880 AMD16_RS09915 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMD16_RS09925 SM00851 MGS-like domain AMD16_RS09925 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD16_RS09985 SM00850 LytTr DNA-binding domain AMD16_RS09990 SM00937 AMD16_RS09990 AMD16_RS10000 SM00448 cheY-homologous receiver domain AMD16_RS10000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD16_RS10005 SM00073 Histidine Phosphotransfer domain AMD16_RS10005 SM00387 Histidine kinase-like ATPases AMD16_RS10005 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS10005 SM00448 cheY-homologous receiver domain AMD16_RS10030 SM00966 SpoVT / AbrB like domain AMD16_RS10050 SM00052 Putative diguanylate phosphodiesterase AMD16_RS10050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS10050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS10050 SM00091 PAS domain AMD16_RS10050 SM00267 diguanylate cyclase AMD16_RS10055 SM00448 cheY-homologous receiver domain AMD16_RS10065 SM00138 Methyltransferase, chemotaxis proteins AMD16_RS10070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10125 SM01049 AMD16_RS10125 AMD16_RS10135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS10140 SM00073 Histidine Phosphotransfer domain AMD16_RS10140 SM00260 Two component signalling adaptor domain AMD16_RS10140 SM00387 Histidine kinase-like ATPases AMD16_RS10140 SM01231 AMD16_RS10140 AMD16_RS10145 SM00448 cheY-homologous receiver domain AMD16_RS10155 SM00260 Two component signalling adaptor domain AMD16_RS10185 SM00220 Serine/Threonine protein kinases, catalytic domain AMD16_RS10245 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS10270 SM00073 Histidine Phosphotransfer domain AMD16_RS10270 SM00260 Two component signalling adaptor domain AMD16_RS10270 SM00387 Histidine kinase-like ATPases AMD16_RS10270 SM01231 AMD16_RS10270 AMD16_RS10280 SM00448 cheY-homologous receiver domain AMD16_RS10295 SM00382 ATPases associated with a variety of cellular activities AMD16_RS10295 SM00962 SRP54-type protein, GTPase domain AMD16_RS10310 SM00052 Putative diguanylate phosphodiesterase AMD16_RS10310 SM00267 diguanylate cyclase AMD16_RS10315 SM00267 diguanylate cyclase AMD16_RS10325 SM00267 diguanylate cyclase AMD16_RS10375 SM00382 ATPases associated with a variety of cellular activities AMD16_RS10425 SM00822 AMD16_RS10425 AMD16_RS10450 SM00382 ATPases associated with a variety of cellular activities AMD16_RS10455 SM00448 cheY-homologous receiver domain AMD16_RS10465 SM00421 helix_turn_helix, Lux Regulon AMD16_RS10465 SM00448 cheY-homologous receiver domain AMD16_RS10505 SM00047 Lysozyme subfamily 2 AMD16_RS10550 SM00260 Two component signalling adaptor domain AMD16_RS10550 SM00448 cheY-homologous receiver domain AMD16_RS10555 SM00858 AMD16_RS10555 AMD16_RS10570 SM00387 Histidine kinase-like ATPases AMD16_RS10575 SM00052 Putative diguanylate phosphodiesterase AMD16_RS10575 SM00267 diguanylate cyclase AMD16_RS10575 SM00448 cheY-homologous receiver domain AMD16_RS10580 SM00091 PAS domain AMD16_RS10580 SM00387 Histidine kinase-like ATPases AMD16_RS10585 SM00052 Putative diguanylate phosphodiesterase AMD16_RS10585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS10585 SM00091 PAS domain AMD16_RS10585 SM00267 diguanylate cyclase AMD16_RS10595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS10620 SM00382 ATPases associated with a variety of cellular activities AMD16_RS10620 SM01086 C-terminal, D2-small domain, of ClpB protein AMD16_RS10625 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS10645 SM00382 ATPases associated with a variety of cellular activities AMD16_RS10645 SM00843 AMD16_RS10645 AMD16_RS10665 SM00382 ATPases associated with a variety of cellular activities AMD16_RS10695 SM00562 AMD16_RS10695 AMD16_RS10705 SM00028 Tetratricopeptide repeats AMD16_RS10720 SM00564 beta-propeller repeat AMD16_RS10725 SM00382 ATPases associated with a variety of cellular activities AMD16_RS10730 SM00852 Probable molybdopterin binding domain AMD16_RS10735 SM00450 Rhodanese Homology Domain AMD16_RS10780 SM00852 Probable molybdopterin binding domain AMD16_RS10805 SM00529 Helix-turn-helix diphteria tox regulatory element AMD16_RS10815 SM00479 AMD16_RS10815 AMD16_RS10885 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS10885 SM00732 Likely ribonuclease with RNase H fold. AMD16_RS10890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS10890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS10890 SM00091 PAS domain AMD16_RS10890 SM00387 Histidine kinase-like ATPases AMD16_RS10890 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS10890 SM00448 cheY-homologous receiver domain AMD16_RS10895 SM00448 cheY-homologous receiver domain AMD16_RS10980 SM00382 ATPases associated with a variety of cellular activities AMD16_RS11030 SM00382 ATPases associated with a variety of cellular activities AMD16_RS11040 SM00849 Metallo-beta-lactamase superfamily AMD16_RS11055 SM00382 ATPases associated with a variety of cellular activities AMD16_RS11070 SM00226 Low molecular weight phosphatase family AMD16_RS11080 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD16_RS11080 SM00465 GIY-YIG type nucleases (URI domain) AMD16_RS11110 SM00823 Phosphopantetheine attachment site AMD16_RS11145 SM00984 UDP binding domain AMD16_RS11165 SM00450 Rhodanese Homology Domain AMD16_RS11170 SM00421 helix_turn_helix, Lux Regulon AMD16_RS11170 SM00448 cheY-homologous receiver domain AMD16_RS11175 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS11180 SM00363 S4 RNA-binding domain AMD16_RS11220 SM01034 Sensors of blue-light using FAD AMD16_RS11325 SM00448 cheY-homologous receiver domain AMD16_RS11325 SM00850 LytTr DNA-binding domain AMD16_RS11345 SM00869 Autotransporter beta-domain AMD16_RS11365 SM00387 Histidine kinase-like ATPases AMD16_RS11365 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS11370 SM00421 helix_turn_helix, Lux Regulon AMD16_RS11370 SM00448 cheY-homologous receiver domain AMD16_RS11375 SM00869 Autotransporter beta-domain AMD16_RS11380 SM00052 Putative diguanylate phosphodiesterase AMD16_RS11405 SM00448 cheY-homologous receiver domain AMD16_RS11450 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS11455 SM00387 Histidine kinase-like ATPases AMD16_RS11460 SM00421 helix_turn_helix, Lux Regulon AMD16_RS11460 SM00448 cheY-homologous receiver domain AMD16_RS11465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS11505 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS11570 SM00966 SpoVT / AbrB like domain AMD16_RS11615 SM00736 Dystroglycan-type cadherin-like domains. AMD16_RS11635 SM00382 ATPases associated with a variety of cellular activities AMD16_RS11805 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS11845 SM00487 DEAD-like helicases superfamily AMD16_RS12100 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS12100 SM01240 AMD16_RS12100 AMD16_RS12125 SM00822 AMD16_RS12125 AMD16_RS12135 SM00028 Tetratricopeptide repeats AMD16_RS12145 SM00411 bacterial (prokaryotic) histone like domain AMD16_RS12150 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS12225 SM00354 helix_turn _helix lactose operon repressor AMD16_RS12250 SM00363 S4 RNA-binding domain AMD16_RS12275 SM00382 ATPases associated with a variety of cellular activities AMD16_RS12325 SM00357 Cold shock protein domain AMD16_RS12330 SM00382 ATPases associated with a variety of cellular activities AMD16_RS12335 SM00382 ATPases associated with a variety of cellular activities AMD16_RS12365 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD16_RS12375 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD16_RS12390 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD16_RS12430 SM00840 AMD16_RS12430 AMD16_RS12455 SM01234 AMD16_RS12455 AMD16_RS12495 SM00849 Metallo-beta-lactamase superfamily AMD16_RS12550 SM00841 Elongation factor P, C-terminal AMD16_RS12550 SM01185 AMD16_RS12550 AMD16_RS12560 SM00052 Putative diguanylate phosphodiesterase AMD16_RS12560 SM00267 diguanylate cyclase AMD16_RS12560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS12595 SM00382 ATPases associated with a variety of cellular activities AMD16_RS12600 SM00487 DEAD-like helicases superfamily AMD16_RS12600 SM00490 helicase superfamily c-terminal domain AMD16_RS12625 SM00357 Cold shock protein domain AMD16_RS12630 SM01322 AMD16_RS12630 AMD16_RS12640 SM00052 Putative diguanylate phosphodiesterase AMD16_RS12640 SM00267 diguanylate cyclase AMD16_RS12655 SM00822 AMD16_RS12655 AMD16_RS12675 SM00853 MutL C terminal dimerisation domain AMD16_RS12675 SM01340 AMD16_RS12675 AMD16_RS12680 SM00646 AMD16_RS12680 AMD16_RS12715 SM00474 3'-5' exonuclease AMD16_RS12730 SM00528 Domain in histone-like proteins of HNS family AMD16_RS12815 SM00857 Resolvase, N terminal domain AMD16_RS12885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS12885 SM00267 diguanylate cyclase AMD16_RS12890 SM00260 Two component signalling adaptor domain AMD16_RS12895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS12895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS12905 SM00487 DEAD-like helicases superfamily AMD16_RS12905 SM00490 helicase superfamily c-terminal domain AMD16_RS12960 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS12985 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS12985 SM01091 Transporter associated domain AMD16_RS13020 SM00382 ATPases associated with a variety of cellular activities AMD16_RS13050 SM01230 AMD16_RS13050 AMD16_RS13060 SM01230 AMD16_RS13060 AMD16_RS13070 SM00267 diguanylate cyclase AMD16_RS13070 SM00448 cheY-homologous receiver domain AMD16_RS13120 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS13120 SM00091 PAS domain AMD16_RS13120 SM00387 Histidine kinase-like ATPases AMD16_RS13120 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS13120 SM00448 cheY-homologous receiver domain AMD16_RS13120 SM01079 AMD16_RS13120 AMD16_RS13125 SM00448 cheY-homologous receiver domain AMD16_RS13125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD16_RS13155 SM00354 helix_turn _helix lactose operon repressor AMD16_RS13215 SM01323 AMD16_RS13215 AMD16_RS13230 SM00344 helix_turn_helix ASNC type AMD16_RS13310 SM00387 Histidine kinase-like ATPases AMD16_RS13355 SM00944 Pro-kumamolisin, activation domain AMD16_RS13405 SM01130 AMD16_RS13405 AMD16_RS13430 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS13435 SM00382 ATPases associated with a variety of cellular activities AMD16_RS13435 SM00962 SRP54-type protein, GTPase domain AMD16_RS13435 SM00963 SRP54-type protein, helical bundle domain AMD16_RS13440 SM00478 endonuclease III AMD16_RS13450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS13450 SM00091 PAS domain AMD16_RS13450 SM00387 Histidine kinase-like ATPases AMD16_RS13450 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS13450 SM00448 cheY-homologous receiver domain AMD16_RS13465 SM00465 GIY-YIG type nucleases (URI domain) AMD16_RS13495 SM00507 HNH nucleases AMD16_RS13500 SM00861 Transketolase, pyrimidine binding domain AMD16_RS13525 SM00849 Metallo-beta-lactamase superfamily AMD16_RS13610 SM00422 helix_turn_helix, mercury resistance AMD16_RS13615 SM00411 bacterial (prokaryotic) histone like domain AMD16_RS13620 SM00873 B3/4 domain AMD16_RS13620 SM00874 tRNA synthetase B5 domain AMD16_RS13620 SM00896 Ferredoxin-fold anticodon binding domain AMD16_RS13645 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD16_RS13650 SM00354 helix_turn _helix lactose operon repressor AMD16_RS13655 SM00642 Alpha-amylase domain AMD16_RS13685 SM00642 Alpha-amylase domain AMD16_RS13730 SM00382 ATPases associated with a variety of cellular activities AMD16_RS13790 SM00487 DEAD-like helicases superfamily AMD16_RS13790 SM00490 helicase superfamily c-terminal domain AMD16_RS14040 SM01001 AIR carboxylase AMD16_RS14060 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS14060 SM00322 K homology RNA-binding domain AMD16_RS14065 SM01387 AMD16_RS14065 AMD16_RS14085 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS14085 SM00322 K homology RNA-binding domain AMD16_RS14135 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD16_RS14140 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD16_RS14185 SM00822 AMD16_RS14185 AMD16_RS14200 SM00052 Putative diguanylate phosphodiesterase AMD16_RS14200 SM00267 diguanylate cyclase AMD16_RS14200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS14275 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD16_RS14305 SM00257 Lysin motif AMD16_RS14335 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS14400 SM01160 AMD16_RS14400 AMD16_RS14455 SM00098 Alkaline phosphatase homologues AMD16_RS14460 SM00977 TilS substrate C-terminal domain AMD16_RS14475 SM01351 AMD16_RS14475 AMD16_RS14510 SM00316 Ribosomal protein S1-like RNA-binding domain AMD16_RS14645 SM00382 ATPases associated with a variety of cellular activities AMD16_RS14675 SM00448 cheY-homologous receiver domain AMD16_RS14675 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS14680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS14680 SM00387 Histidine kinase-like ATPases AMD16_RS14680 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS14715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS14715 SM00267 diguanylate cyclase AMD16_RS14720 SM00363 S4 RNA-binding domain AMD16_RS14725 SM00052 Putative diguanylate phosphodiesterase AMD16_RS14725 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS14725 SM00091 PAS domain AMD16_RS14725 SM00267 diguanylate cyclase AMD16_RS14730 SM00487 DEAD-like helicases superfamily AMD16_RS14730 SM00490 helicase superfamily c-terminal domain AMD16_RS14775 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS14775 SM00478 endonuclease III AMD16_RS14775 SM01009 AlkA N-terminal domain AMD16_RS14795 SM00829 Enoylreductase AMD16_RS14860 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS14930 SM00645 Papain family cysteine protease AMD16_RS14935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS14935 SM00387 Histidine kinase-like ATPases AMD16_RS14935 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS14940 SM00448 cheY-homologous receiver domain AMD16_RS14940 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS14955 SM00487 DEAD-like helicases superfamily AMD16_RS14955 SM00490 helicase superfamily c-terminal domain AMD16_RS14955 SM00982 AMD16_RS14955 AMD16_RS14955 SM01058 CarD-like/TRCF domain AMD16_RS14990 SM00073 Histidine Phosphotransfer domain AMD16_RS14990 SM00260 Two component signalling adaptor domain AMD16_RS14990 SM00387 Histidine kinase-like ATPases AMD16_RS14990 SM01231 AMD16_RS14990 AMD16_RS14995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS14995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS15000 SM00260 Two component signalling adaptor domain AMD16_RS15005 SM00052 Putative diguanylate phosphodiesterase AMD16_RS15005 SM00448 cheY-homologous receiver domain AMD16_RS15010 SM00138 Methyltransferase, chemotaxis proteins AMD16_RS15015 SM00448 cheY-homologous receiver domain AMD16_RS15020 SM00155 Phospholipase D. Active site motifs. AMD16_RS15035 SM00855 Phosphoglycerate mutase family AMD16_RS15085 SM00248 ankyrin repeats AMD16_RS15130 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD16_RS15135 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD16_RS15145 SM00829 Enoylreductase AMD16_RS15150 SM00267 diguanylate cyclase AMD16_RS15215 SM00732 Likely ribonuclease with RNase H fold. AMD16_RS15265 SM00411 bacterial (prokaryotic) histone like domain AMD16_RS15295 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AMD16_RS15310 SM00382 ATPases associated with a variety of cellular activities AMD16_RS15340 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD16_RS15345 SM00671 Sel1-like repeats. AMD16_RS15375 SM00054 EF-hand, calcium binding motif AMD16_RS15465 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS15485 SM00382 ATPases associated with a variety of cellular activities AMD16_RS15530 SM00924 MgtE intracellular N domain AMD16_RS15560 SM00656 AMD16_RS15560 AMD16_RS15575 SM00421 helix_turn_helix, Lux Regulon AMD16_RS15600 SM00849 Metallo-beta-lactamase superfamily AMD16_RS15610 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD16_RS15630 SM00422 helix_turn_helix, mercury resistance AMD16_RS15770 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS15780 SM00387 Histidine kinase-like ATPases AMD16_RS15780 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS15780 SM00448 cheY-homologous receiver domain AMD16_RS15785 SM00387 Histidine kinase-like ATPases AMD16_RS15785 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS15785 SM00448 cheY-homologous receiver domain AMD16_RS15795 SM00387 Histidine kinase-like ATPases AMD16_RS15795 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS15795 SM00448 cheY-homologous receiver domain AMD16_RS15800 SM00867 YceI-like domain AMD16_RS15810 SM00867 YceI-like domain AMD16_RS15865 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS15895 SM00028 Tetratricopeptide repeats AMD16_RS15995 SM00812 Alpha-L-fucosidase AMD16_RS16000 SM00636 AMD16_RS16000 AMD16_RS16015 SM00758 AMD16_RS16015 AMD16_RS16015 SM01217 AMD16_RS16015 AMD16_RS16045 SM01149 AMD16_RS16045 AMD16_RS16105 SM00260 Two component signalling adaptor domain AMD16_RS16115 SM00073 Histidine Phosphotransfer domain AMD16_RS16115 SM00260 Two component signalling adaptor domain AMD16_RS16115 SM00387 Histidine kinase-like ATPases AMD16_RS16115 SM00448 cheY-homologous receiver domain AMD16_RS16115 SM01231 AMD16_RS16115 AMD16_RS16120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS16125 SM00260 Two component signalling adaptor domain AMD16_RS16130 SM00448 cheY-homologous receiver domain AMD16_RS16135 SM00448 cheY-homologous receiver domain AMD16_RS16160 SM00491 AMD16_RS16160 AMD16_RS16185 SM00954 Region found in RelA / SpoT proteins AMD16_RS16230 SM00382 ATPases associated with a variety of cellular activities AMD16_RS16230 SM00487 DEAD-like helicases superfamily AMD16_RS16230 SM00490 helicase superfamily c-terminal domain AMD16_RS16230 SM00847 Helicase associated domain (HA2) Add an annotation AMD16_RS16240 SM00341 Helicase and RNase D C-terminal AMD16_RS16240 SM00487 DEAD-like helicases superfamily AMD16_RS16240 SM00490 helicase superfamily c-terminal domain AMD16_RS16240 SM00956 AMD16_RS16240 AMD16_RS16250 SM00448 cheY-homologous receiver domain AMD16_RS16275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS16275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS16290 SM00448 cheY-homologous receiver domain AMD16_RS16295 SM00091 PAS domain AMD16_RS16295 SM00911 HWE histidine kinase AMD16_RS16350 SM00382 ATPases associated with a variety of cellular activities AMD16_RS16365 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD16_RS16400 SM00834 Putative regulatory protein AMD16_RS16440 SM00382 ATPases associated with a variety of cellular activities AMD16_RS16545 SM00855 Phosphoglycerate mutase family AMD16_RS16595 SM00382 ATPases associated with a variety of cellular activities AMD16_RS16595 SM01086 C-terminal, D2-small domain, of ClpB protein AMD16_RS16600 SM00382 ATPases associated with a variety of cellular activities AMD16_RS16610 SM00062 Bacterial periplasmic substrate-binding proteins AMD16_RS16685 SM00564 beta-propeller repeat AMD16_RS16690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS16795 SM01126 AMD16_RS16795 AMD16_RS16805 SM00881 CoA binding domain AMD16_RS16815 SM00387 Histidine kinase-like ATPases AMD16_RS16815 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS16820 SM00382 ATPases associated with a variety of cellular activities AMD16_RS16820 SM00448 cheY-homologous receiver domain AMD16_RS16885 SM00387 Histidine kinase-like ATPases AMD16_RS16885 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS16890 SM00448 cheY-homologous receiver domain AMD16_RS16890 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS16905 SM00642 Alpha-amylase domain AMD16_RS16910 SM00528 Domain in histone-like proteins of HNS family AMD16_RS16920 SM00318 Staphylococcal nuclease homologues AMD16_RS16985 SM00387 Histidine kinase-like ATPases AMD16_RS16985 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS16990 SM00448 cheY-homologous receiver domain AMD16_RS17005 SM01034 Sensors of blue-light using FAD AMD16_RS17055 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS17075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS17075 SM00387 Histidine kinase-like ATPases AMD16_RS17100 SM00255 Toll - interleukin 1 - resistance AMD16_RS17115 SM00869 Autotransporter beta-domain AMD16_RS17170 SM00354 helix_turn _helix lactose operon repressor AMD16_RS17200 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD16_RS17310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS17310 SM00387 Histidine kinase-like ATPases AMD16_RS17345 SM00506 Appr-1"-p processing enzyme AMD16_RS17385 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD16_RS17410 SM00849 Metallo-beta-lactamase superfamily AMD16_RS17425 SM00382 ATPases associated with a variety of cellular activities AMD16_RS17495 SM00861 Transketolase, pyrimidine binding domain AMD16_RS17510 SM00028 Tetratricopeptide repeats AMD16_RS17510 SM00327 von Willebrand factor (vWF) type A domain AMD16_RS17515 SM00327 von Willebrand factor (vWF) type A domain AMD16_RS17530 SM00382 ATPases associated with a variety of cellular activities AMD16_RS17535 SM00965 Secretin and TonB N terminus short domain AMD16_RS17585 SM00487 DEAD-like helicases superfamily AMD16_RS17585 SM00490 helicase superfamily c-terminal domain AMD16_RS17595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD16_RS17595 SM00954 Region found in RelA / SpoT proteins AMD16_RS17600 SM01409 AMD16_RS17600 AMD16_RS17605 SM00072 Guanylate kinase homologues. AMD16_RS17630 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS17725 SM00028 Tetratricopeptide repeats AMD16_RS17725 SM00382 ATPases associated with a variety of cellular activities AMD16_RS17725 SM00421 helix_turn_helix, Lux Regulon AMD16_RS17795 SM00464 Found in ATP-dependent protease La (LON) AMD16_RS17845 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS17850 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS17865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS17895 SM00917 LeuA allosteric (dimerisation) domain AMD16_RS17900 SM01329 AMD16_RS17900 AMD16_RS17920 SM00267 diguanylate cyclase AMD16_RS17970 SM00919 Malic enzyme, NAD binding domain AMD16_RS17970 SM01274 AMD16_RS17970 AMD16_RS17985 SM00387 Histidine kinase-like ATPases AMD16_RS17985 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS17985 SM00448 cheY-homologous receiver domain AMD16_RS18020 SM00421 helix_turn_helix, Lux Regulon AMD16_RS18020 SM00448 cheY-homologous receiver domain AMD16_RS18030 SM00387 Histidine kinase-like ATPases AMD16_RS18030 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS18035 SM00448 cheY-homologous receiver domain AMD16_RS18035 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS18050 SM00822 AMD16_RS18050 AMD16_RS18055 SM00354 helix_turn _helix lactose operon repressor AMD16_RS18070 SM00642 Alpha-amylase domain AMD16_RS18080 SM01154 AMD16_RS18080 AMD16_RS18115 SM00450 Rhodanese Homology Domain AMD16_RS18175 SM00028 Tetratricopeptide repeats AMD16_RS18260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD16_RS18260 SM00866 AMD16_RS18260 AMD16_RS18320 SM00382 ATPases associated with a variety of cellular activities AMD16_RS18350 SM01211 AMD16_RS18350 AMD16_RS18415 SM00656 AMD16_RS18415 AMD16_RS18445 SM00528 Domain in histone-like proteins of HNS family AMD16_RS18460 SM00382 ATPases associated with a variety of cellular activities AMD16_RS18490 SM00882 Coenzyme A transferase AMD16_RS18495 SM00882 Coenzyme A transferase AMD16_RS18510 SM00984 UDP binding domain AMD16_RS18535 SM00893 Electron transfer flavoprotein domain AMD16_RS18540 SM00893 Electron transfer flavoprotein domain AMD16_RS18610 SM00382 ATPases associated with a variety of cellular activities AMD16_RS18625 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS18665 SM00487 DEAD-like helicases superfamily AMD16_RS18665 SM00490 helicase superfamily c-terminal domain AMD16_RS18700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS18735 SM00825 Beta-ketoacyl synthase AMD16_RS18805 SM00382 ATPases associated with a variety of cellular activities AMD16_RS18825 SM00382 ATPases associated with a variety of cellular activities AMD16_RS18825 SM00448 cheY-homologous receiver domain AMD16_RS18830 SM00387 Histidine kinase-like ATPases AMD16_RS18845 SM00830 Chorismate mutase type II AMD16_RS18855 SM00382 ATPases associated with a variety of cellular activities AMD16_RS18925 SM00986 Uracil DNA glycosylase superfamily AMD16_RS18925 SM00987 UreE urease accessory protein, C-terminal domain AMD16_RS18965 SM00382 ATPases associated with a variety of cellular activities AMD16_RS18965 SM00930 AMD16_RS18965 AMD16_RS18985 SM00387 Histidine kinase-like ATPases AMD16_RS18985 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS18985 SM00448 cheY-homologous receiver domain AMD16_RS19040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS19040 SM00091 PAS domain AMD16_RS19040 SM00387 Histidine kinase-like ATPases AMD16_RS19040 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS19040 SM00448 cheY-homologous receiver domain AMD16_RS19060 SM01005 Alanine racemase, C-terminal domain AMD16_RS19070 SM00344 helix_turn_helix ASNC type AMD16_RS19125 SM00382 ATPases associated with a variety of cellular activities AMD16_RS19135 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMD16_RS19140 SM00986 Uracil DNA glycosylase superfamily AMD16_RS19140 SM00987 UreE urease accessory protein, C-terminal domain AMD16_RS19145 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD16_RS19210 SM00448 cheY-homologous receiver domain AMD16_RS19210 SM00850 LytTr DNA-binding domain AMD16_RS19215 SM00387 Histidine kinase-like ATPases AMD16_RS19255 SM00091 PAS domain AMD16_RS19255 SM00138 Methyltransferase, chemotaxis proteins AMD16_RS19255 SM00911 HWE histidine kinase AMD16_RS19260 SM00448 cheY-homologous receiver domain AMD16_RS19270 SM00382 ATPases associated with a variety of cellular activities AMD16_RS19270 SM00448 cheY-homologous receiver domain AMD16_RS19325 SM00382 ATPases associated with a variety of cellular activities AMD16_RS19400 SM00382 ATPases associated with a variety of cellular activities AMD16_RS19405 SM00631 AMD16_RS19405 AMD16_RS19445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD16_RS19445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS19450 SM00477 DNA/RNA non-specific endonuclease AMD16_RS19450 SM00892 DNA/RNA non-specific endonuclease AMD16_RS19600 SM00257 Lysin motif AMD16_RS19625 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMD16_RS19625 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMD16_RS19625 SM00493 AMD16_RS19625 AMD16_RS19680 SM00487 DEAD-like helicases superfamily AMD16_RS19680 SM00490 helicase superfamily c-terminal domain AMD16_RS19715 SM00986 Uracil DNA glycosylase superfamily AMD16_RS19715 SM00987 UreE urease accessory protein, C-terminal domain AMD16_RS19720 SM00448 cheY-homologous receiver domain AMD16_RS19730 SM00382 ATPases associated with a variety of cellular activities AMD16_RS19735 SM00487 DEAD-like helicases superfamily AMD16_RS19735 SM00490 helicase superfamily c-terminal domain AMD16_RS19745 SM00357 Cold shock protein domain AMD16_RS19745 SM00382 ATPases associated with a variety of cellular activities AMD16_RS19745 SM00959 Rho termination factor, N-terminal domain AMD16_RS19775 SM00487 DEAD-like helicases superfamily AMD16_RS19815 SM00257 Lysin motif AMD16_RS19845 SM01150 AMD16_RS19845 AMD16_RS19890 SM00644 AMD16_RS19890 AMD16_RS19900 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD16_RS19935 SM01217 AMD16_RS19935 AMD16_RS19940 SM00905 Dihydroneopterin aldolase AMD16_RS19965 SM00400 zinc finger AMD16_RS19965 SM00493 AMD16_RS19965 AMD16_RS19965 SM00766 DNA primase DnaG DnaB-binding AMD16_RS20065 SM00363 S4 RNA-binding domain AMD16_RS20110 SM00470 ParB-like nuclease domain AMD16_RS20130 SM01259 AMD16_RS20130 AMD16_RS20160 SM00836 DALR anticodon binding domain AMD16_RS20160 SM01016 Arginyl tRNA synthetase N terminal dom AMD16_RS20190 SM00823 Phosphopantetheine attachment site AMD16_RS20190 SM00824 Thioesterase AMD16_RS20235 SM00938 Nitrogen regulatory protein P-II AMD16_RS20245 SM00382 ATPases associated with a variety of cellular activities AMD16_RS20260 SM00052 Putative diguanylate phosphodiesterase AMD16_RS20290 SM00244 prohibitin homologues AMD16_RS20340 SM00448 cheY-homologous receiver domain AMD16_RS20340 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS20345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD16_RS20345 SM00387 Histidine kinase-like ATPases AMD16_RS20345 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS20365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD16_RS20410 SM01060 AMD16_RS20410 AMD16_RS20425 SM00421 helix_turn_helix, Lux Regulon AMD16_RS20425 SM00448 cheY-homologous receiver domain AMD16_RS20440 SM00382 ATPases associated with a variety of cellular activities AMD16_RS20480 SM00849 Metallo-beta-lactamase superfamily AMD16_RS20510 SM00960 Roadblock/LC7 domain AMD16_RS20575 SM00387 Histidine kinase-like ATPases AMD16_RS20575 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS20580 SM00448 cheY-homologous receiver domain AMD16_RS20580 SM00862 Transcriptional regulatory protein, C terminal AMD16_RS20600 SM00248 ankyrin repeats AMD16_RS20610 SM00491 AMD16_RS20610 AMD16_RS20640 SM00477 DNA/RNA non-specific endonuclease AMD16_RS20640 SM00892 DNA/RNA non-specific endonuclease AMD16_RS20655 SM01004 Delta-aminolevulinic acid dehydratase AMD16_RS20705 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD16_RS20725 SM00382 ATPases associated with a variety of cellular activities AMD16_RS20735 SM00530 Helix-turn-helix XRE-family like proteins AMD16_RS20775 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS20785 SM00382 ATPases associated with a variety of cellular activities AMD16_RS20845 SM00881 CoA binding domain AMD16_RS20850 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD16_RS20850 SM00924 MgtE intracellular N domain AMD16_RS20855 SM01057 Eukaryotic-type carbonic anhydrase AMD16_RS20880 SM00248 ankyrin repeats AMD16_RS20890 SM00825 Beta-ketoacyl synthase AMD16_RS20915 SM00822 AMD16_RS20915 AMD16_RS20960 SM00563 Phosphate acyltransferases AMD16_RS21015 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD16_RS21015 SM00474 3'-5' exonuclease AMD16_RS21015 SM00475 5'-3' exonuclease AMD16_RS21015 SM00482 DNA polymerase A domain AMD16_RS21030 SM00912 haemagglutination activity domain AMD16_RS21050 SM00331 Sigma factor PP2C-like phosphatases AMD16_RS21050 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD16_RS21075 SM00240 Forkhead associated domain AMD16_RS21090 SM00028 Tetratricopeptide repeats AMD16_RS21100 SM00220 Serine/Threonine protein kinases, catalytic domain AMD16_RS21120 SM00965 Secretin and TonB N terminus short domain AMD16_RS21130 SM00915 Jacalin-like lectin domain AMD16_RS21155 SM00382 ATPases associated with a variety of cellular activities AMD16_RS21155 SM01086 C-terminal, D2-small domain, of ClpB protein AMD16_RS21195 SM00342 helix_turn_helix, arabinose operon control protein AMD16_RS21205 SM01266 AMD16_RS21205 AMD16_RS21225 SM00155 Phospholipase D. Active site motifs. AMD16_RS21365 SM00421 helix_turn_helix, Lux Regulon AMD16_RS21365 SM00448 cheY-homologous receiver domain AMD16_RS21420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD16_RS21440 SM00346 helix_turn_helix isocitrate lyase regulation AMD16_RS21450 SM00091 PAS domain AMD16_RS21450 SM00387 Histidine kinase-like ATPases AMD16_RS21450 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS21450 SM00448 cheY-homologous receiver domain AMD16_RS21480 SM00564 beta-propeller repeat AMD16_RS21535 SM00382 ATPases associated with a variety of cellular activities AMD16_RS21540 SM00836 DALR anticodon binding domain AMD16_RS21550 SM00382 ATPases associated with a variety of cellular activities AMD16_RS21625 SM00354 helix_turn _helix lactose operon repressor AMD16_RS21640 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD16_RS21650 SM00758 AMD16_RS21650 AMD16_RS21650 SM01217 AMD16_RS21650 AMD16_RS21670 SM00612 AMD16_RS21670 AMD16_RS21700 SM01007 Class II Aldolase and Adducin N-terminal domain AMD16_RS21735 SM00633 Glycosyl hydrolase family 10 AMD16_RS21750 SM00633 Glycosyl hydrolase family 10 AMD16_RS21765 SM00633 Glycosyl hydrolase family 10 AMD16_RS21820 SM00829 Enoylreductase AMD16_RS21825 SM00563 Phosphate acyltransferases AMD16_RS21835 SM00354 helix_turn _helix lactose operon repressor AMD16_RS21860 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD16_RS21895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS21895 SM00388 His Kinase A (phosphoacceptor) domain AMD16_RS21910 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD16_RS21910 SM01232 AMD16_RS21910 AMD16_RS21950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS21950 SM00091 PAS domain AMD16_RS22005 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD16_RS22040 SM00155 Phospholipase D. Active site motifs. AMD16_RS22125 SM00796 Allophanate hydrolase subunit 1 AMD16_RS22125 SM00797 Allophanate hydrolase subunit 2 AMD16_RS22125 SM00878 Biotin carboxylase C-terminal domain AMD16_RS22185 SM00382 ATPases associated with a variety of cellular activities AMD16_RS22235 SM00829 Enoylreductase AMD16_RS22275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD16_RS22275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD16_RS22275 SM00091 PAS domain AMD16_RS22275 SM00267 diguanylate cyclase AMD16_RS22305 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD16_RS22330 SM00014 Acid phosphatase homologues AMD16_RS22340 SM00028 Tetratricopeptide repeats