AMD15_RS00065 SM00028 Tetratricopeptide repeats AMD15_RS00490 SM00382 ATPases associated with a variety of cellular activities AMD15_RS00490 SM00760 Bacterial dnaA protein helix-turn-helix domain AMD15_RS00495 SM00480 DNA polymerase III beta subunit AMD15_RS00505 SM00387 Histidine kinase-like ATPases AMD15_RS00505 SM00433 TopoisomeraseII AMD15_RS00520 SM00028 Tetratricopeptide repeats AMD15_RS00555 SM00155 Phospholipase D. Active site motifs. AMD15_RS00570 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS00600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD15_RS00600 SM00245 tail specific protease AMD15_RS00640 SM00829 Enoylreductase AMD15_RS00765 SM00382 ATPases associated with a variety of cellular activities AMD15_RS00875 SM00487 DEAD-like helicases superfamily AMD15_RS00875 SM00490 helicase superfamily c-terminal domain AMD15_RS00895 SM00822 AMD15_RS00895 AMD15_RS00900 SM00822 AMD15_RS00900 AMD15_RS01155 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMD15_RS01175 SM00421 helix_turn_helix, Lux Regulon AMD15_RS01175 SM00448 cheY-homologous receiver domain AMD15_RS01195 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS01275 SM00642 Alpha-amylase domain AMD15_RS01280 SM00642 Alpha-amylase domain AMD15_RS01285 SM00642 Alpha-amylase domain AMD15_RS01335 SM00354 helix_turn _helix lactose operon repressor AMD15_RS01375 SM00344 helix_turn_helix ASNC type AMD15_RS01395 SM00382 ATPases associated with a variety of cellular activities AMD15_RS01410 SM00382 ATPases associated with a variety of cellular activities AMD15_RS01445 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS01475 SM00855 Phosphoglycerate mutase family AMD15_RS01480 SM00867 YceI-like domain AMD15_RS01485 SM00155 Phospholipase D. Active site motifs. AMD15_RS01495 SM00563 Phosphate acyltransferases AMD15_RS01510 SM00028 Tetratricopeptide repeats AMD15_RS01520 SM00829 Enoylreductase AMD15_RS01535 SM01230 AMD15_RS01535 AMD15_RS01540 SM00938 Nitrogen regulatory protein P-II AMD15_RS01550 SM00387 Histidine kinase-like ATPases AMD15_RS01550 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS01555 SM00382 ATPases associated with a variety of cellular activities AMD15_RS01555 SM00448 cheY-homologous receiver domain AMD15_RS01615 SM00450 Rhodanese Homology Domain AMD15_RS01640 SM00387 Histidine kinase-like ATPases AMD15_RS01640 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS01645 SM00382 ATPases associated with a variety of cellular activities AMD15_RS01645 SM00448 cheY-homologous receiver domain AMD15_RS01755 SM00563 Phosphate acyltransferases AMD15_RS01790 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS01815 SM00100 Cyclic nucleotide-monophosphate binding domain AMD15_RS01815 SM00267 diguanylate cyclase AMD15_RS01840 SM00878 Biotin carboxylase C-terminal domain AMD15_RS01865 SM00953 AMD15_RS01865 AMD15_RS01905 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMD15_RS01935 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS01970 SM00829 Enoylreductase AMD15_RS02000 SM00487 DEAD-like helicases superfamily AMD15_RS02000 SM00490 helicase superfamily c-terminal domain AMD15_RS02000 SM00847 Helicase associated domain (HA2) Add an annotation AMD15_RS02135 SM00422 helix_turn_helix, mercury resistance AMD15_RS02170 SM00448 cheY-homologous receiver domain AMD15_RS02170 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS02175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS02175 SM00387 Histidine kinase-like ATPases AMD15_RS02175 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS02320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD15_RS02325 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS02345 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS02375 SM00420 helix_turn_helix, Deoxyribose operon repressor AMD15_RS02375 SM01134 AMD15_RS02375 AMD15_RS02390 SM00882 Coenzyme A transferase AMD15_RS02395 SM00882 Coenzyme A transferase AMD15_RS02415 SM00998 Adenylosuccinate lyase C-terminus AMD15_RS02435 SM00346 helix_turn_helix isocitrate lyase regulation AMD15_RS02440 SM00090 RIO-like kinase AMD15_RS02455 SM01228 AMD15_RS02455 AMD15_RS02510 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS02510 SM00876 Biotin and Thiamin Synthesis associated domain AMD15_RS02530 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMD15_RS02625 SM00382 ATPases associated with a variety of cellular activities AMD15_RS02685 SM00267 diguanylate cyclase AMD15_RS02695 SM00642 Alpha-amylase domain AMD15_RS02700 SM00642 Alpha-amylase domain AMD15_RS02710 SM00642 Alpha-amylase domain AMD15_RS02720 SM00642 Alpha-amylase domain AMD15_RS02770 SM00822 AMD15_RS02770 AMD15_RS02780 SM00487 DEAD-like helicases superfamily AMD15_RS02780 SM00490 helicase superfamily c-terminal domain AMD15_RS02790 SM00326 Src homology 3 domains AMD15_RS02795 SM00861 Transketolase, pyrimidine binding domain AMD15_RS02805 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMD15_RS02825 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS02920 SM00271 DnaJ molecular chaperone homology domain AMD15_RS02940 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMD15_RS02960 SM00903 Flavin reductase like domain AMD15_RS02980 SM00100 Cyclic nucleotide-monophosphate binding domain AMD15_RS02980 SM00419 helix_turn_helix, cAMP Regulatory protein AMD15_RS03035 SM00387 Histidine kinase-like ATPases AMD15_RS03035 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS03035 SM00448 cheY-homologous receiver domain AMD15_RS03040 SM00052 Putative diguanylate phosphodiesterase AMD15_RS03040 SM00267 diguanylate cyclase AMD15_RS03040 SM00448 cheY-homologous receiver domain AMD15_RS03105 SM00563 Phosphate acyltransferases AMD15_RS03130 SM01209 AMD15_RS03130 AMD15_RS03130 SM01210 AMD15_RS03130 AMD15_RS03140 SM00798 AICARFT/IMPCHase bienzyme AMD15_RS03140 SM00851 MGS-like domain AMD15_RS03155 SM00195 Dual specificity phosphatase, catalytic domain AMD15_RS03175 SM00563 Phosphate acyltransferases AMD15_RS03200 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS03225 SM00878 Biotin carboxylase C-terminal domain AMD15_RS03255 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS03265 SM00234 in StAR and phosphatidylcholine transfer protein AMD15_RS03285 SM00883 Chaperonin 10 Kd subunit AMD15_RS03345 SM00944 Pro-kumamolisin, activation domain AMD15_RS03360 SM00867 YceI-like domain AMD15_RS03415 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD15_RS03425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD15_RS03425 SM00895 AMD15_RS03425 AMD15_RS03445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS03445 SM00331 Sigma factor PP2C-like phosphatases AMD15_RS03485 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS03550 SM00267 diguanylate cyclase AMD15_RS03580 SM00062 Bacterial periplasmic substrate-binding proteins AMD15_RS03620 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD15_RS03620 SM01232 AMD15_RS03620 AMD15_RS03635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS03645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS03645 SM00091 PAS domain AMD15_RS03645 SM00267 diguanylate cyclase AMD15_RS03650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS03650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS03650 SM01049 AMD15_RS03650 AMD15_RS03655 SM00637 AMD15_RS03655 AMD15_RS03665 SM00267 diguanylate cyclase AMD15_RS03695 SM00448 cheY-homologous receiver domain AMD15_RS03695 SM00850 LytTr DNA-binding domain AMD15_RS03775 SM00382 ATPases associated with a variety of cellular activities AMD15_RS03775 SM01086 C-terminal, D2-small domain, of ClpB protein AMD15_RS03805 SM00267 diguanylate cyclase AMD15_RS03810 SM01263 AMD15_RS03810 AMD15_RS03830 SM00564 beta-propeller repeat AMD15_RS03835 SM00062 Bacterial periplasmic substrate-binding proteins AMD15_RS03835 SM00248 ankyrin repeats AMD15_RS03850 SM00829 Enoylreductase AMD15_RS03860 SM00382 ATPases associated with a variety of cellular activities AMD15_RS03870 SM00268 Actin AMD15_RS03895 SM00710 Parallel beta-helix repeats AMD15_RS03915 SM00936 Penicillin-binding protein 5, C-terminal domain AMD15_RS03935 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS03940 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD15_RS03940 SM00245 tail specific protease AMD15_RS03995 SM01350 AMD15_RS03995 AMD15_RS04005 SM00749 bacterial OsmY and nodulation domain AMD15_RS04010 SM00387 Histidine kinase-like ATPases AMD15_RS04010 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS04015 SM00448 cheY-homologous receiver domain AMD15_RS04020 SM00387 Histidine kinase-like ATPases AMD15_RS04020 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS04020 SM00448 cheY-homologous receiver domain AMD15_RS04050 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD15_RS04075 SM00382 ATPases associated with a variety of cellular activities AMD15_RS04145 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD15_RS04145 SM00866 AMD15_RS04145 AMD15_RS04155 SM00354 helix_turn _helix lactose operon repressor AMD15_RS04220 SM00849 Metallo-beta-lactamase superfamily AMD15_RS04225 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS04240 SM00448 cheY-homologous receiver domain AMD15_RS04240 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS04260 SM00829 Enoylreductase AMD15_RS04280 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD15_RS04300 SM00382 ATPases associated with a variety of cellular activities AMD15_RS04360 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD15_RS04390 SM00387 Histidine kinase-like ATPases AMD15_RS04390 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS04395 SM00448 cheY-homologous receiver domain AMD15_RS04395 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS04505 SM00842 Cell division protein FtsA AMD15_RS04510 SM00864 Tubulin/FtsZ family, GTPase domain AMD15_RS04510 SM00865 Tubulin/FtsZ family, C-terminal domain AMD15_RS04530 SM00957 SecA DEAD-like domain AMD15_RS04530 SM00958 SecA preprotein cross-linking domain AMD15_RS04555 SM00829 Enoylreductase AMD15_RS04560 SM00944 Pro-kumamolisin, activation domain AMD15_RS04575 SM00642 Alpha-amylase domain AMD15_RS04610 SM00996 S-adenosyl-L-homocysteine hydrolase AMD15_RS04610 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD15_RS04725 SM00382 ATPases associated with a variety of cellular activities AMD15_RS04745 SM00382 ATPases associated with a variety of cellular activities AMD15_RS04755 SM00448 cheY-homologous receiver domain AMD15_RS04755 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS04760 SM00387 Histidine kinase-like ATPases AMD15_RS04760 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS04810 SM00382 ATPases associated with a variety of cellular activities AMD15_RS04820 SM00382 ATPases associated with a variety of cellular activities AMD15_RS04880 SM00382 ATPases associated with a variety of cellular activities AMD15_RS04895 SM00650 Ribosomal RNA adenine dimethylases AMD15_RS04960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD15_RS04960 SM00895 AMD15_RS04960 AMD15_RS04995 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS05070 SM00448 cheY-homologous receiver domain AMD15_RS05075 SM00387 Histidine kinase-like ATPases AMD15_RS05075 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS05075 SM00448 cheY-homologous receiver domain AMD15_RS05080 SM00421 helix_turn_helix, Lux Regulon AMD15_RS05145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD15_RS05145 SM00475 5'-3' exonuclease AMD15_RS05175 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMD15_RS05175 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMD15_RS05290 SM00852 Probable molybdopterin binding domain AMD15_RS05295 SM00028 Tetratricopeptide repeats AMD15_RS05300 SM00937 AMD15_RS05300 AMD15_RS05310 SM00028 Tetratricopeptide repeats AMD15_RS05330 SM01400 AMD15_RS05330 AMD15_RS05380 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMD15_RS05380 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD15_RS05385 SM00649 Ribosomal protein L11/L12 AMD15_RS05410 SM00663 RNA polymerase I subunit A N-terminus AMD15_RS05425 SM00838 Elongation factor G C-terminus AMD15_RS05425 SM00889 Elongation factor G, domain IV AMD15_RS05435 SM01403 AMD15_RS05435 AMD15_RS05455 SM01382 AMD15_RS05455 AMD15_RS05455 SM01383 AMD15_RS05455 AMD15_RS05470 SM00322 K homology RNA-binding domain AMD15_RS05490 SM01374 AMD15_RS05490 AMD15_RS05495 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD15_RS05555 SM00363 S4 RNA-binding domain AMD15_RS05555 SM01390 AMD15_RS05555 AMD15_RS05560 SM00662 RNA polymerases D AMD15_RS05605 SM00838 Elongation factor G C-terminus AMD15_RS05635 SM00829 Enoylreductase AMD15_RS05685 SM00382 ATPases associated with a variety of cellular activities AMD15_RS05695 SM00829 Enoylreductase AMD15_RS05725 SM00855 Phosphoglycerate mutase family AMD15_RS05775 SM00014 Acid phosphatase homologues AMD15_RS05795 SM00091 PAS domain AMD15_RS05795 SM00387 Histidine kinase-like ATPases AMD15_RS05795 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS05800 SM00448 cheY-homologous receiver domain AMD15_RS05800 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS05820 SM01329 AMD15_RS05820 AMD15_RS05965 SM00387 Histidine kinase-like ATPases AMD15_RS05985 SM00382 ATPases associated with a variety of cellular activities AMD15_RS05985 SM00994 ClpX C4-type zinc finger AMD15_RS05985 SM01086 C-terminal, D2-small domain, of ClpB protein AMD15_RS05990 SM00382 ATPases associated with a variety of cellular activities AMD15_RS05990 SM00464 Found in ATP-dependent protease La (LON) AMD15_RS05995 SM00411 bacterial (prokaryotic) histone like domain AMD15_RS06020 SM00257 Lysin motif AMD15_RS06025 SM00849 Metallo-beta-lactamase superfamily AMD15_RS06040 SM00479 AMD15_RS06040 AMD15_RS06045 SM00331 Sigma factor PP2C-like phosphatases AMD15_RS06045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD15_RS06070 SM00849 Metallo-beta-lactamase superfamily AMD15_RS06075 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS06145 SM00382 ATPases associated with a variety of cellular activities AMD15_RS06155 SM00493 AMD15_RS06155 AMD15_RS06170 SM00460 Transglutaminase/protease-like homologues AMD15_RS06180 SM00382 ATPases associated with a variety of cellular activities AMD15_RS06225 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD15_RS06230 SM00822 AMD15_RS06230 AMD15_RS06240 SM00825 Beta-ketoacyl synthase AMD15_RS06275 SM00382 ATPases associated with a variety of cellular activities AMD15_RS06315 SM01359 AMD15_RS06315 AMD15_RS06315 SM01360 AMD15_RS06315 AMD15_RS06350 SM00271 DnaJ molecular chaperone homology domain AMD15_RS06355 SM00448 cheY-homologous receiver domain AMD15_RS06360 SM00244 prohibitin homologues AMD15_RS06365 SM00244 prohibitin homologues AMD15_RS06370 SM01321 AMD15_RS06370 AMD15_RS06375 SM00788 Adenylosuccinate synthetase AMD15_RS06390 SM00822 AMD15_RS06390 AMD15_RS06445 SM00220 Serine/Threonine protein kinases, catalytic domain AMD15_RS06460 SM00855 Phosphoglycerate mutase family AMD15_RS06515 SM00052 Putative diguanylate phosphodiesterase AMD15_RS06520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD15_RS06530 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD15_RS06535 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD15_RS06550 SM00974 AMD15_RS06550 AMD15_RS06570 SM00966 SpoVT / AbrB like domain AMD15_RS06590 SM00481 DNA polymerase alpha chain like domain AMD15_RS06600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD15_RS06635 SM00091 PAS domain AMD15_RS06635 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS06650 SM01060 AMD15_RS06650 AMD15_RS06700 SM00448 cheY-homologous receiver domain AMD15_RS06700 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS06705 SM00387 Histidine kinase-like ATPases AMD15_RS06705 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS06740 SM00421 helix_turn_helix, Lux Regulon AMD15_RS06740 SM00448 cheY-homologous receiver domain AMD15_RS06755 SM00478 endonuclease III AMD15_RS06775 SM00244 prohibitin homologues AMD15_RS06860 SM00904 Riboflavin kinase AMD15_RS06905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD15_RS06910 SM00382 ATPases associated with a variety of cellular activities AMD15_RS06920 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS06925 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS06960 SM00387 Histidine kinase-like ATPases AMD15_RS06960 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS06965 SM00387 Histidine kinase-like ATPases AMD15_RS06965 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS06965 SM00448 cheY-homologous receiver domain AMD15_RS06990 SM00387 Histidine kinase-like ATPases AMD15_RS06990 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS06990 SM00448 cheY-homologous receiver domain AMD15_RS07000 SM00138 Methyltransferase, chemotaxis proteins AMD15_RS07005 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS07005 SM00387 Histidine kinase-like ATPases AMD15_RS07005 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS07005 SM00448 cheY-homologous receiver domain AMD15_RS07010 SM00091 PAS domain AMD15_RS07010 SM00387 Histidine kinase-like ATPases AMD15_RS07010 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS07015 SM00448 cheY-homologous receiver domain AMD15_RS07025 SM00813 Alpha-L-arabinofuranosidase C-terminus AMD15_RS07045 SM00382 ATPases associated with a variety of cellular activities AMD15_RS07045 SM00962 SRP54-type protein, GTPase domain AMD15_RS07045 SM00963 SRP54-type protein, helical bundle domain AMD15_RS07115 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMD15_RS07115 SM00534 ATPase domain of DNA mismatch repair MUTS family AMD15_RS07135 SM00812 Alpha-L-fucosidase AMD15_RS07160 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS07210 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD15_RS07215 SM00838 Elongation factor G C-terminus AMD15_RS07230 SM00358 Double-stranded RNA binding motif AMD15_RS07230 SM00535 Ribonuclease III family AMD15_RS07245 SM00448 cheY-homologous receiver domain AMD15_RS07255 SM01118 AMD15_RS07255 AMD15_RS07290 SM00357 Cold shock protein domain AMD15_RS07305 SM00487 DEAD-like helicases superfamily AMD15_RS07305 SM00490 helicase superfamily c-terminal domain AMD15_RS07335 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS07335 SM00267 diguanylate cyclase AMD15_RS07355 SM00869 Autotransporter beta-domain AMD15_RS07360 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD15_RS07365 SM00671 Sel1-like repeats. AMD15_RS07365 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD15_RS07565 SM00382 ATPases associated with a variety of cellular activities AMD15_RS07650 SM00481 DNA polymerase alpha chain like domain AMD15_RS07690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD15_RS07720 SM00267 diguanylate cyclase AMD15_RS07745 SM00972 Spore Coat Protein U domain AMD15_RS07760 SM00972 Spore Coat Protein U domain AMD15_RS07770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD15_RS07790 SM01172 AMD15_RS07790 AMD15_RS07795 SM00710 Parallel beta-helix repeats AMD15_RS07795 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AMD15_RS07830 SM00434 DNA Topoisomerase IV AMD15_RS07835 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS07840 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS07865 SM01217 AMD15_RS07865 AMD15_RS07870 SM00631 AMD15_RS07870 AMD15_RS07900 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS07920 SM00382 ATPases associated with a variety of cellular activities AMD15_RS07935 SM00947 Carbonic anhydrase AMD15_RS07950 SM00357 Cold shock protein domain AMD15_RS08065 SM00267 diguanylate cyclase AMD15_RS08075 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS08075 SM00267 diguanylate cyclase AMD15_RS08090 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS08105 SM00528 Domain in histone-like proteins of HNS family AMD15_RS08130 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS08225 SM00271 DnaJ molecular chaperone homology domain AMD15_RS08265 SM00382 ATPases associated with a variety of cellular activities AMD15_RS08290 SM00861 Transketolase, pyrimidine binding domain AMD15_RS08300 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD15_RS08320 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS08320 SM01091 Transporter associated domain AMD15_RS08350 SM00382 ATPases associated with a variety of cellular activities AMD15_RS08355 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD15_RS08370 SM00984 UDP binding domain AMD15_RS08390 SM00354 helix_turn _helix lactose operon repressor AMD15_RS08410 SM01018 B12 binding domain AMD15_RS08420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMD15_RS08440 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS08440 SM00357 Cold shock protein domain AMD15_RS08440 SM00955 AMD15_RS08440 AMD15_RS08450 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD15_RS08455 SM00267 diguanylate cyclase AMD15_RS08460 SM00479 AMD15_RS08460 AMD15_RS08475 SM00382 ATPases associated with a variety of cellular activities AMD15_RS08510 SM00947 Carbonic anhydrase AMD15_RS08520 SM00478 endonuclease III AMD15_RS08545 SM00450 Rhodanese Homology Domain AMD15_RS08555 SM00644 AMD15_RS08555 AMD15_RS08575 SM00382 ATPases associated with a variety of cellular activities AMD15_RS08580 SM00981 AMD15_RS08580 AMD15_RS08610 SM00479 AMD15_RS08610 AMD15_RS08635 SM00947 Carbonic anhydrase AMD15_RS08680 SM00421 helix_turn_helix, Lux Regulon AMD15_RS08680 SM00448 cheY-homologous receiver domain AMD15_RS08740 SM00968 SMC proteins Flexible Hinge Domain AMD15_RS08745 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMD15_RS08760 SM00292 breast cancer carboxy-terminal domain AMD15_RS08760 SM00532 Ligase N family AMD15_RS08780 SM00434 DNA Topoisomerase IV AMD15_RS08785 SM00564 beta-propeller repeat AMD15_RS08825 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD15_RS08825 SM00866 AMD15_RS08825 AMD15_RS08850 SM00240 Forkhead associated domain AMD15_RS08870 SM00830 Chorismate mutase type II AMD15_RS08915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS08915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS08925 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS08940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS08940 SM00091 PAS domain AMD15_RS08940 SM00387 Histidine kinase-like ATPases AMD15_RS08940 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS08940 SM00448 cheY-homologous receiver domain AMD15_RS08945 SM00448 cheY-homologous receiver domain AMD15_RS08950 SM00382 ATPases associated with a variety of cellular activities AMD15_RS08955 SM00091 PAS domain AMD15_RS08955 SM00387 Histidine kinase-like ATPases AMD15_RS08955 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS08955 SM00448 cheY-homologous receiver domain AMD15_RS09110 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS09120 SM00382 ATPases associated with a variety of cellular activities AMD15_RS09145 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS09145 SM01091 Transporter associated domain AMD15_RS09170 SM00387 Histidine kinase-like ATPases AMD15_RS09170 SM00433 TopoisomeraseII AMD15_RS09195 SM01192 AMD15_RS09195 AMD15_RS09195 SM01193 AMD15_RS09195 AMD15_RS09220 SM00463 Small MutS-related domain AMD15_RS09240 SM00257 Lysin motif AMD15_RS09250 SM01103 AMD15_RS09250 AMD15_RS09260 SM00382 ATPases associated with a variety of cellular activities AMD15_RS09300 SM00382 ATPases associated with a variety of cellular activities AMD15_RS09310 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD15_RS09325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS09325 SM00091 PAS domain AMD15_RS09325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS09380 SM00670 Large family of predicted nucleotide-binding domains AMD15_RS09400 SM01130 AMD15_RS09400 AMD15_RS09425 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD15_RS09470 SM00758 AMD15_RS09470 AMD15_RS09500 SM00646 AMD15_RS09500 AMD15_RS09570 SM00052 Putative diguanylate phosphodiesterase AMD15_RS09570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS09570 SM00267 diguanylate cyclase AMD15_RS09580 SM00448 cheY-homologous receiver domain AMD15_RS09585 SM00387 Histidine kinase-like ATPases AMD15_RS09595 SM00014 Acid phosphatase homologues AMD15_RS09670 SM00912 haemagglutination activity domain AMD15_RS09715 SM00100 Cyclic nucleotide-monophosphate binding domain AMD15_RS09715 SM00419 helix_turn_helix, cAMP Regulatory protein AMD15_RS09790 SM01007 Class II Aldolase and Adducin N-terminal domain AMD15_RS09835 SM00841 Elongation factor P, C-terminal AMD15_RS09835 SM01185 AMD15_RS09835 AMD15_RS09840 SM00822 AMD15_RS09840 AMD15_RS09860 SM00899 AMD15_RS09860 AMD15_RS09895 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMD15_RS09905 SM00851 MGS-like domain AMD15_RS09905 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD15_RS09965 SM00850 LytTr DNA-binding domain AMD15_RS09970 SM00937 AMD15_RS09970 AMD15_RS09980 SM00448 cheY-homologous receiver domain AMD15_RS09980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD15_RS09985 SM00073 Histidine Phosphotransfer domain AMD15_RS09985 SM00387 Histidine kinase-like ATPases AMD15_RS09985 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS09985 SM00448 cheY-homologous receiver domain AMD15_RS10010 SM00966 SpoVT / AbrB like domain AMD15_RS10030 SM00052 Putative diguanylate phosphodiesterase AMD15_RS10030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS10030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS10030 SM00091 PAS domain AMD15_RS10030 SM00267 diguanylate cyclase AMD15_RS10035 SM00448 cheY-homologous receiver domain AMD15_RS10045 SM00138 Methyltransferase, chemotaxis proteins AMD15_RS10050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10105 SM01049 AMD15_RS10105 AMD15_RS10115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS10120 SM00073 Histidine Phosphotransfer domain AMD15_RS10120 SM00260 Two component signalling adaptor domain AMD15_RS10120 SM00387 Histidine kinase-like ATPases AMD15_RS10120 SM01231 AMD15_RS10120 AMD15_RS10125 SM00448 cheY-homologous receiver domain AMD15_RS10135 SM00260 Two component signalling adaptor domain AMD15_RS10165 SM00220 Serine/Threonine protein kinases, catalytic domain AMD15_RS10225 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS10250 SM00073 Histidine Phosphotransfer domain AMD15_RS10250 SM00260 Two component signalling adaptor domain AMD15_RS10250 SM00387 Histidine kinase-like ATPases AMD15_RS10250 SM01231 AMD15_RS10250 AMD15_RS10260 SM00448 cheY-homologous receiver domain AMD15_RS10275 SM00382 ATPases associated with a variety of cellular activities AMD15_RS10275 SM00962 SRP54-type protein, GTPase domain AMD15_RS10290 SM00052 Putative diguanylate phosphodiesterase AMD15_RS10290 SM00267 diguanylate cyclase AMD15_RS10295 SM00267 diguanylate cyclase AMD15_RS10305 SM00267 diguanylate cyclase AMD15_RS10355 SM00382 ATPases associated with a variety of cellular activities AMD15_RS10405 SM00822 AMD15_RS10405 AMD15_RS10430 SM00382 ATPases associated with a variety of cellular activities AMD15_RS10435 SM00448 cheY-homologous receiver domain AMD15_RS10445 SM00421 helix_turn_helix, Lux Regulon AMD15_RS10445 SM00448 cheY-homologous receiver domain AMD15_RS10485 SM00047 Lysozyme subfamily 2 AMD15_RS10530 SM00260 Two component signalling adaptor domain AMD15_RS10530 SM00448 cheY-homologous receiver domain AMD15_RS10535 SM00858 AMD15_RS10535 AMD15_RS10550 SM00387 Histidine kinase-like ATPases AMD15_RS10555 SM00052 Putative diguanylate phosphodiesterase AMD15_RS10555 SM00267 diguanylate cyclase AMD15_RS10555 SM00448 cheY-homologous receiver domain AMD15_RS10560 SM00091 PAS domain AMD15_RS10560 SM00387 Histidine kinase-like ATPases AMD15_RS10565 SM00052 Putative diguanylate phosphodiesterase AMD15_RS10565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS10565 SM00091 PAS domain AMD15_RS10565 SM00267 diguanylate cyclase AMD15_RS10575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS10600 SM00382 ATPases associated with a variety of cellular activities AMD15_RS10600 SM01086 C-terminal, D2-small domain, of ClpB protein AMD15_RS10605 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS10625 SM00382 ATPases associated with a variety of cellular activities AMD15_RS10625 SM00843 AMD15_RS10625 AMD15_RS10645 SM00382 ATPases associated with a variety of cellular activities AMD15_RS10675 SM00562 AMD15_RS10675 AMD15_RS10685 SM00028 Tetratricopeptide repeats AMD15_RS10700 SM00564 beta-propeller repeat AMD15_RS10705 SM00382 ATPases associated with a variety of cellular activities AMD15_RS10710 SM00852 Probable molybdopterin binding domain AMD15_RS10715 SM00450 Rhodanese Homology Domain AMD15_RS10760 SM00852 Probable molybdopterin binding domain AMD15_RS10785 SM00529 Helix-turn-helix diphteria tox regulatory element AMD15_RS10795 SM00479 AMD15_RS10795 AMD15_RS10865 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS10865 SM00732 Likely ribonuclease with RNase H fold. AMD15_RS10870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS10870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS10870 SM00091 PAS domain AMD15_RS10870 SM00387 Histidine kinase-like ATPases AMD15_RS10870 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS10870 SM00448 cheY-homologous receiver domain AMD15_RS10875 SM00448 cheY-homologous receiver domain AMD15_RS10960 SM00382 ATPases associated with a variety of cellular activities AMD15_RS11010 SM00382 ATPases associated with a variety of cellular activities AMD15_RS11020 SM00849 Metallo-beta-lactamase superfamily AMD15_RS11035 SM00382 ATPases associated with a variety of cellular activities AMD15_RS11050 SM00226 Low molecular weight phosphatase family AMD15_RS11060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD15_RS11060 SM00465 GIY-YIG type nucleases (URI domain) AMD15_RS11090 SM00823 Phosphopantetheine attachment site AMD15_RS11120 SM00984 UDP binding domain AMD15_RS11140 SM00450 Rhodanese Homology Domain AMD15_RS11145 SM00421 helix_turn_helix, Lux Regulon AMD15_RS11145 SM00448 cheY-homologous receiver domain AMD15_RS11150 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS11155 SM00363 S4 RNA-binding domain AMD15_RS11195 SM01034 Sensors of blue-light using FAD AMD15_RS11295 SM00448 cheY-homologous receiver domain AMD15_RS11295 SM00850 LytTr DNA-binding domain AMD15_RS11315 SM00869 Autotransporter beta-domain AMD15_RS11335 SM00387 Histidine kinase-like ATPases AMD15_RS11335 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS11340 SM00421 helix_turn_helix, Lux Regulon AMD15_RS11340 SM00448 cheY-homologous receiver domain AMD15_RS11345 SM00869 Autotransporter beta-domain AMD15_RS11350 SM00052 Putative diguanylate phosphodiesterase AMD15_RS11375 SM00448 cheY-homologous receiver domain AMD15_RS11420 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS11425 SM00387 Histidine kinase-like ATPases AMD15_RS11430 SM00421 helix_turn_helix, Lux Regulon AMD15_RS11430 SM00448 cheY-homologous receiver domain AMD15_RS11435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS11475 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS11540 SM00966 SpoVT / AbrB like domain AMD15_RS11585 SM00736 Dystroglycan-type cadherin-like domains. AMD15_RS11605 SM00382 ATPases associated with a variety of cellular activities AMD15_RS11655 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMD15_RS11655 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMD15_RS11655 SM00493 AMD15_RS11655 AMD15_RS11775 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS11815 SM00487 DEAD-like helicases superfamily AMD15_RS12070 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS12070 SM01240 AMD15_RS12070 AMD15_RS12095 SM00822 AMD15_RS12095 AMD15_RS12105 SM00028 Tetratricopeptide repeats AMD15_RS12115 SM00411 bacterial (prokaryotic) histone like domain AMD15_RS12120 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS12195 SM00354 helix_turn _helix lactose operon repressor AMD15_RS12220 SM00363 S4 RNA-binding domain AMD15_RS12245 SM00382 ATPases associated with a variety of cellular activities AMD15_RS12295 SM00357 Cold shock protein domain AMD15_RS12300 SM00382 ATPases associated with a variety of cellular activities AMD15_RS12305 SM00382 ATPases associated with a variety of cellular activities AMD15_RS12335 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD15_RS12345 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD15_RS12360 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD15_RS12400 SM00840 AMD15_RS12400 AMD15_RS12425 SM01234 AMD15_RS12425 AMD15_RS12465 SM00849 Metallo-beta-lactamase superfamily AMD15_RS12520 SM00841 Elongation factor P, C-terminal AMD15_RS12520 SM01185 AMD15_RS12520 AMD15_RS12530 SM00052 Putative diguanylate phosphodiesterase AMD15_RS12530 SM00267 diguanylate cyclase AMD15_RS12530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS12565 SM00382 ATPases associated with a variety of cellular activities AMD15_RS12570 SM00487 DEAD-like helicases superfamily AMD15_RS12570 SM00490 helicase superfamily c-terminal domain AMD15_RS12595 SM00357 Cold shock protein domain AMD15_RS12600 SM01322 AMD15_RS12600 AMD15_RS12610 SM00052 Putative diguanylate phosphodiesterase AMD15_RS12610 SM00267 diguanylate cyclase AMD15_RS12625 SM00822 AMD15_RS12625 AMD15_RS12645 SM00853 MutL C terminal dimerisation domain AMD15_RS12645 SM01340 AMD15_RS12645 AMD15_RS12650 SM00646 AMD15_RS12650 AMD15_RS12685 SM00474 3'-5' exonuclease AMD15_RS12700 SM00528 Domain in histone-like proteins of HNS family AMD15_RS12785 SM00857 Resolvase, N terminal domain AMD15_RS12855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS12855 SM00267 diguanylate cyclase AMD15_RS12860 SM00260 Two component signalling adaptor domain AMD15_RS12865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS12865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS12875 SM00487 DEAD-like helicases superfamily AMD15_RS12875 SM00490 helicase superfamily c-terminal domain AMD15_RS12930 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS12955 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS12955 SM01091 Transporter associated domain AMD15_RS12990 SM00382 ATPases associated with a variety of cellular activities AMD15_RS13020 SM01230 AMD15_RS13020 AMD15_RS13030 SM01230 AMD15_RS13030 AMD15_RS13040 SM00267 diguanylate cyclase AMD15_RS13040 SM00448 cheY-homologous receiver domain AMD15_RS13090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS13090 SM00091 PAS domain AMD15_RS13090 SM00387 Histidine kinase-like ATPases AMD15_RS13090 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS13090 SM00448 cheY-homologous receiver domain AMD15_RS13090 SM01079 AMD15_RS13090 AMD15_RS13095 SM00448 cheY-homologous receiver domain AMD15_RS13095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD15_RS13125 SM00354 helix_turn _helix lactose operon repressor AMD15_RS13185 SM01323 AMD15_RS13185 AMD15_RS13200 SM00344 helix_turn_helix ASNC type AMD15_RS13280 SM00387 Histidine kinase-like ATPases AMD15_RS13325 SM00944 Pro-kumamolisin, activation domain AMD15_RS13375 SM01130 AMD15_RS13375 AMD15_RS13400 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS13405 SM00382 ATPases associated with a variety of cellular activities AMD15_RS13405 SM00962 SRP54-type protein, GTPase domain AMD15_RS13405 SM00963 SRP54-type protein, helical bundle domain AMD15_RS13410 SM00478 endonuclease III AMD15_RS13420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS13420 SM00091 PAS domain AMD15_RS13420 SM00387 Histidine kinase-like ATPases AMD15_RS13420 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS13420 SM00448 cheY-homologous receiver domain AMD15_RS13435 SM00465 GIY-YIG type nucleases (URI domain) AMD15_RS13465 SM00507 HNH nucleases AMD15_RS13470 SM00861 Transketolase, pyrimidine binding domain AMD15_RS13495 SM00849 Metallo-beta-lactamase superfamily AMD15_RS13580 SM00422 helix_turn_helix, mercury resistance AMD15_RS13585 SM00411 bacterial (prokaryotic) histone like domain AMD15_RS13590 SM00873 B3/4 domain AMD15_RS13590 SM00874 tRNA synthetase B5 domain AMD15_RS13590 SM00896 Ferredoxin-fold anticodon binding domain AMD15_RS13615 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD15_RS13620 SM00354 helix_turn _helix lactose operon repressor AMD15_RS13625 SM00642 Alpha-amylase domain AMD15_RS13655 SM00642 Alpha-amylase domain AMD15_RS13700 SM00382 ATPases associated with a variety of cellular activities AMD15_RS13760 SM00487 DEAD-like helicases superfamily AMD15_RS13760 SM00490 helicase superfamily c-terminal domain AMD15_RS14010 SM01001 AIR carboxylase AMD15_RS14030 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS14030 SM00322 K homology RNA-binding domain AMD15_RS14035 SM01387 AMD15_RS14035 AMD15_RS14055 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS14055 SM00322 K homology RNA-binding domain AMD15_RS14105 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD15_RS14110 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD15_RS14155 SM00822 AMD15_RS14155 AMD15_RS14170 SM00052 Putative diguanylate phosphodiesterase AMD15_RS14170 SM00267 diguanylate cyclase AMD15_RS14170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS14245 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD15_RS14275 SM00257 Lysin motif AMD15_RS14305 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS14370 SM01160 AMD15_RS14370 AMD15_RS14425 SM00098 Alkaline phosphatase homologues AMD15_RS14430 SM00977 TilS substrate C-terminal domain AMD15_RS14445 SM01351 AMD15_RS14445 AMD15_RS14480 SM00316 Ribosomal protein S1-like RNA-binding domain AMD15_RS14615 SM00382 ATPases associated with a variety of cellular activities AMD15_RS14645 SM00448 cheY-homologous receiver domain AMD15_RS14645 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS14650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS14650 SM00387 Histidine kinase-like ATPases AMD15_RS14650 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS14685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS14685 SM00267 diguanylate cyclase AMD15_RS14690 SM00363 S4 RNA-binding domain AMD15_RS14695 SM00052 Putative diguanylate phosphodiesterase AMD15_RS14695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS14695 SM00091 PAS domain AMD15_RS14695 SM00267 diguanylate cyclase AMD15_RS14700 SM00487 DEAD-like helicases superfamily AMD15_RS14700 SM00490 helicase superfamily c-terminal domain AMD15_RS14745 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS14745 SM00478 endonuclease III AMD15_RS14745 SM01009 AlkA N-terminal domain AMD15_RS14765 SM00829 Enoylreductase AMD15_RS14830 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS14900 SM00645 Papain family cysteine protease AMD15_RS14905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS14905 SM00387 Histidine kinase-like ATPases AMD15_RS14905 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS14910 SM00448 cheY-homologous receiver domain AMD15_RS14910 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS14925 SM00487 DEAD-like helicases superfamily AMD15_RS14925 SM00490 helicase superfamily c-terminal domain AMD15_RS14925 SM00982 AMD15_RS14925 AMD15_RS14925 SM01058 CarD-like/TRCF domain AMD15_RS14960 SM00073 Histidine Phosphotransfer domain AMD15_RS14960 SM00260 Two component signalling adaptor domain AMD15_RS14960 SM00387 Histidine kinase-like ATPases AMD15_RS14960 SM01231 AMD15_RS14960 AMD15_RS14965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS14965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS14970 SM00260 Two component signalling adaptor domain AMD15_RS14975 SM00052 Putative diguanylate phosphodiesterase AMD15_RS14975 SM00448 cheY-homologous receiver domain AMD15_RS14980 SM00138 Methyltransferase, chemotaxis proteins AMD15_RS14985 SM00448 cheY-homologous receiver domain AMD15_RS14990 SM00155 Phospholipase D. Active site motifs. AMD15_RS15005 SM00855 Phosphoglycerate mutase family AMD15_RS15055 SM00248 ankyrin repeats AMD15_RS15100 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD15_RS15105 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD15_RS15115 SM00829 Enoylreductase AMD15_RS15120 SM00267 diguanylate cyclase AMD15_RS15185 SM00732 Likely ribonuclease with RNase H fold. AMD15_RS15220 SM00382 ATPases associated with a variety of cellular activities AMD15_RS15235 SM00411 bacterial (prokaryotic) histone like domain AMD15_RS15265 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AMD15_RS15280 SM00382 ATPases associated with a variety of cellular activities AMD15_RS15310 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD15_RS15315 SM00671 Sel1-like repeats. AMD15_RS15345 SM00054 EF-hand, calcium binding motif AMD15_RS15435 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS15455 SM00382 ATPases associated with a variety of cellular activities AMD15_RS15500 SM00924 MgtE intracellular N domain AMD15_RS15530 SM00656 AMD15_RS15530 AMD15_RS15545 SM00421 helix_turn_helix, Lux Regulon AMD15_RS15570 SM00849 Metallo-beta-lactamase superfamily AMD15_RS15580 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD15_RS15600 SM00422 helix_turn_helix, mercury resistance AMD15_RS15740 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS15750 SM00387 Histidine kinase-like ATPases AMD15_RS15750 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS15750 SM00448 cheY-homologous receiver domain AMD15_RS15755 SM00387 Histidine kinase-like ATPases AMD15_RS15755 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS15755 SM00448 cheY-homologous receiver domain AMD15_RS15765 SM00387 Histidine kinase-like ATPases AMD15_RS15765 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS15765 SM00448 cheY-homologous receiver domain AMD15_RS15770 SM00867 YceI-like domain AMD15_RS15780 SM00867 YceI-like domain AMD15_RS15835 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS15865 SM00028 Tetratricopeptide repeats AMD15_RS15965 SM00812 Alpha-L-fucosidase AMD15_RS15970 SM00636 AMD15_RS15970 AMD15_RS15985 SM00758 AMD15_RS15985 AMD15_RS15985 SM01217 AMD15_RS15985 AMD15_RS16015 SM01149 AMD15_RS16015 AMD15_RS16075 SM00260 Two component signalling adaptor domain AMD15_RS16085 SM00073 Histidine Phosphotransfer domain AMD15_RS16085 SM00260 Two component signalling adaptor domain AMD15_RS16085 SM00387 Histidine kinase-like ATPases AMD15_RS16085 SM00448 cheY-homologous receiver domain AMD15_RS16085 SM01231 AMD15_RS16085 AMD15_RS16090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS16095 SM00260 Two component signalling adaptor domain AMD15_RS16100 SM00448 cheY-homologous receiver domain AMD15_RS16105 SM00448 cheY-homologous receiver domain AMD15_RS16130 SM00491 AMD15_RS16130 AMD15_RS16155 SM00954 Region found in RelA / SpoT proteins AMD15_RS16200 SM00382 ATPases associated with a variety of cellular activities AMD15_RS16200 SM00487 DEAD-like helicases superfamily AMD15_RS16200 SM00490 helicase superfamily c-terminal domain AMD15_RS16200 SM00847 Helicase associated domain (HA2) Add an annotation AMD15_RS16210 SM00341 Helicase and RNase D C-terminal AMD15_RS16210 SM00487 DEAD-like helicases superfamily AMD15_RS16210 SM00490 helicase superfamily c-terminal domain AMD15_RS16210 SM00956 AMD15_RS16210 AMD15_RS16220 SM00448 cheY-homologous receiver domain AMD15_RS16245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS16245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS16260 SM00448 cheY-homologous receiver domain AMD15_RS16265 SM00091 PAS domain AMD15_RS16265 SM00911 HWE histidine kinase AMD15_RS16320 SM00382 ATPases associated with a variety of cellular activities AMD15_RS16335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD15_RS16370 SM00834 Putative regulatory protein AMD15_RS16410 SM00382 ATPases associated with a variety of cellular activities AMD15_RS16515 SM00855 Phosphoglycerate mutase family AMD15_RS16565 SM00382 ATPases associated with a variety of cellular activities AMD15_RS16565 SM01086 C-terminal, D2-small domain, of ClpB protein AMD15_RS16570 SM00382 ATPases associated with a variety of cellular activities AMD15_RS16580 SM00062 Bacterial periplasmic substrate-binding proteins AMD15_RS16655 SM00564 beta-propeller repeat AMD15_RS16660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS16765 SM01126 AMD15_RS16765 AMD15_RS16775 SM00881 CoA binding domain AMD15_RS16785 SM00387 Histidine kinase-like ATPases AMD15_RS16785 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS16790 SM00382 ATPases associated with a variety of cellular activities AMD15_RS16790 SM00448 cheY-homologous receiver domain AMD15_RS16855 SM00387 Histidine kinase-like ATPases AMD15_RS16855 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS16860 SM00448 cheY-homologous receiver domain AMD15_RS16860 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS16875 SM00642 Alpha-amylase domain AMD15_RS16880 SM00528 Domain in histone-like proteins of HNS family AMD15_RS16890 SM00318 Staphylococcal nuclease homologues AMD15_RS16955 SM00387 Histidine kinase-like ATPases AMD15_RS16955 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS16960 SM00448 cheY-homologous receiver domain AMD15_RS16975 SM01034 Sensors of blue-light using FAD AMD15_RS17025 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS17045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS17045 SM00387 Histidine kinase-like ATPases AMD15_RS17070 SM00255 Toll - interleukin 1 - resistance AMD15_RS17085 SM00869 Autotransporter beta-domain AMD15_RS17140 SM00354 helix_turn _helix lactose operon repressor AMD15_RS17170 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD15_RS17280 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS17280 SM00387 Histidine kinase-like ATPases AMD15_RS17315 SM00506 Appr-1"-p processing enzyme AMD15_RS17355 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD15_RS17380 SM00849 Metallo-beta-lactamase superfamily AMD15_RS17395 SM00382 ATPases associated with a variety of cellular activities AMD15_RS17465 SM00861 Transketolase, pyrimidine binding domain AMD15_RS17480 SM00028 Tetratricopeptide repeats AMD15_RS17480 SM00327 von Willebrand factor (vWF) type A domain AMD15_RS17485 SM00327 von Willebrand factor (vWF) type A domain AMD15_RS17500 SM00382 ATPases associated with a variety of cellular activities AMD15_RS17505 SM00965 Secretin and TonB N terminus short domain AMD15_RS17555 SM00487 DEAD-like helicases superfamily AMD15_RS17555 SM00490 helicase superfamily c-terminal domain AMD15_RS17565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD15_RS17565 SM00954 Region found in RelA / SpoT proteins AMD15_RS17570 SM01409 AMD15_RS17570 AMD15_RS17575 SM00072 Guanylate kinase homologues. AMD15_RS17600 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS17695 SM00028 Tetratricopeptide repeats AMD15_RS17695 SM00382 ATPases associated with a variety of cellular activities AMD15_RS17695 SM00421 helix_turn_helix, Lux Regulon AMD15_RS17765 SM00464 Found in ATP-dependent protease La (LON) AMD15_RS17815 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS17820 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS17835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS17865 SM00917 LeuA allosteric (dimerisation) domain AMD15_RS17870 SM01329 AMD15_RS17870 AMD15_RS17890 SM00267 diguanylate cyclase AMD15_RS17940 SM00919 Malic enzyme, NAD binding domain AMD15_RS17940 SM01274 AMD15_RS17940 AMD15_RS17955 SM00387 Histidine kinase-like ATPases AMD15_RS17955 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS17955 SM00448 cheY-homologous receiver domain AMD15_RS17990 SM00421 helix_turn_helix, Lux Regulon AMD15_RS17990 SM00448 cheY-homologous receiver domain AMD15_RS18000 SM00387 Histidine kinase-like ATPases AMD15_RS18000 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS18005 SM00448 cheY-homologous receiver domain AMD15_RS18005 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS18020 SM00822 AMD15_RS18020 AMD15_RS18025 SM00354 helix_turn _helix lactose operon repressor AMD15_RS18040 SM00642 Alpha-amylase domain AMD15_RS18050 SM01154 AMD15_RS18050 AMD15_RS18085 SM00450 Rhodanese Homology Domain AMD15_RS18145 SM00028 Tetratricopeptide repeats AMD15_RS18230 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD15_RS18230 SM00866 AMD15_RS18230 AMD15_RS18290 SM00382 ATPases associated with a variety of cellular activities AMD15_RS18320 SM01211 AMD15_RS18320 AMD15_RS18385 SM00656 AMD15_RS18385 AMD15_RS18415 SM00528 Domain in histone-like proteins of HNS family AMD15_RS18430 SM00382 ATPases associated with a variety of cellular activities AMD15_RS18460 SM00882 Coenzyme A transferase AMD15_RS18465 SM00882 Coenzyme A transferase AMD15_RS18480 SM00984 UDP binding domain AMD15_RS18505 SM00893 Electron transfer flavoprotein domain AMD15_RS18510 SM00893 Electron transfer flavoprotein domain AMD15_RS18580 SM00382 ATPases associated with a variety of cellular activities AMD15_RS18595 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS18635 SM00487 DEAD-like helicases superfamily AMD15_RS18635 SM00490 helicase superfamily c-terminal domain AMD15_RS18670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS18705 SM00825 Beta-ketoacyl synthase AMD15_RS18775 SM00382 ATPases associated with a variety of cellular activities AMD15_RS18795 SM00382 ATPases associated with a variety of cellular activities AMD15_RS18795 SM00448 cheY-homologous receiver domain AMD15_RS18800 SM00387 Histidine kinase-like ATPases AMD15_RS18815 SM00830 Chorismate mutase type II AMD15_RS18825 SM00382 ATPases associated with a variety of cellular activities AMD15_RS18895 SM00986 Uracil DNA glycosylase superfamily AMD15_RS18895 SM00987 UreE urease accessory protein, C-terminal domain AMD15_RS18935 SM00382 ATPases associated with a variety of cellular activities AMD15_RS18935 SM00930 AMD15_RS18935 AMD15_RS18955 SM00387 Histidine kinase-like ATPases AMD15_RS18955 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS18955 SM00448 cheY-homologous receiver domain AMD15_RS19010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS19010 SM00091 PAS domain AMD15_RS19010 SM00387 Histidine kinase-like ATPases AMD15_RS19010 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS19010 SM00448 cheY-homologous receiver domain AMD15_RS19030 SM01005 Alanine racemase, C-terminal domain AMD15_RS19040 SM00344 helix_turn_helix ASNC type AMD15_RS19095 SM00382 ATPases associated with a variety of cellular activities AMD15_RS19105 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMD15_RS19110 SM00986 Uracil DNA glycosylase superfamily AMD15_RS19110 SM00987 UreE urease accessory protein, C-terminal domain AMD15_RS19115 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD15_RS19180 SM00448 cheY-homologous receiver domain AMD15_RS19180 SM00850 LytTr DNA-binding domain AMD15_RS19185 SM00387 Histidine kinase-like ATPases AMD15_RS19225 SM00091 PAS domain AMD15_RS19225 SM00138 Methyltransferase, chemotaxis proteins AMD15_RS19225 SM00911 HWE histidine kinase AMD15_RS19230 SM00448 cheY-homologous receiver domain AMD15_RS19240 SM00382 ATPases associated with a variety of cellular activities AMD15_RS19240 SM00448 cheY-homologous receiver domain AMD15_RS19295 SM00382 ATPases associated with a variety of cellular activities AMD15_RS19370 SM00382 ATPases associated with a variety of cellular activities AMD15_RS19375 SM00631 AMD15_RS19375 AMD15_RS19415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD15_RS19415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS19420 SM00477 DNA/RNA non-specific endonuclease AMD15_RS19420 SM00892 DNA/RNA non-specific endonuclease AMD15_RS19570 SM00257 Lysin motif AMD15_RS19595 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMD15_RS19595 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMD15_RS19595 SM00493 AMD15_RS19595 AMD15_RS19650 SM00487 DEAD-like helicases superfamily AMD15_RS19650 SM00490 helicase superfamily c-terminal domain AMD15_RS19685 SM00986 Uracil DNA glycosylase superfamily AMD15_RS19685 SM00987 UreE urease accessory protein, C-terminal domain AMD15_RS19690 SM00448 cheY-homologous receiver domain AMD15_RS19700 SM00382 ATPases associated with a variety of cellular activities AMD15_RS19705 SM00487 DEAD-like helicases superfamily AMD15_RS19705 SM00490 helicase superfamily c-terminal domain AMD15_RS19715 SM00357 Cold shock protein domain AMD15_RS19715 SM00382 ATPases associated with a variety of cellular activities AMD15_RS19715 SM00959 Rho termination factor, N-terminal domain AMD15_RS19745 SM00487 DEAD-like helicases superfamily AMD15_RS19785 SM00257 Lysin motif AMD15_RS19815 SM01150 AMD15_RS19815 AMD15_RS19860 SM00644 AMD15_RS19860 AMD15_RS19870 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD15_RS19905 SM01217 AMD15_RS19905 AMD15_RS19910 SM00905 Dihydroneopterin aldolase AMD15_RS19935 SM00400 zinc finger AMD15_RS19935 SM00493 AMD15_RS19935 AMD15_RS19935 SM00766 DNA primase DnaG DnaB-binding AMD15_RS20035 SM00363 S4 RNA-binding domain AMD15_RS20080 SM00470 ParB-like nuclease domain AMD15_RS20100 SM01259 AMD15_RS20100 AMD15_RS20130 SM00836 DALR anticodon binding domain AMD15_RS20130 SM01016 Arginyl tRNA synthetase N terminal dom AMD15_RS20160 SM00823 Phosphopantetheine attachment site AMD15_RS20160 SM00824 Thioesterase AMD15_RS20205 SM00938 Nitrogen regulatory protein P-II AMD15_RS20215 SM00382 ATPases associated with a variety of cellular activities AMD15_RS20230 SM00052 Putative diguanylate phosphodiesterase AMD15_RS20260 SM00244 prohibitin homologues AMD15_RS20310 SM00448 cheY-homologous receiver domain AMD15_RS20310 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS20315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD15_RS20315 SM00387 Histidine kinase-like ATPases AMD15_RS20315 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS20335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD15_RS20380 SM01060 AMD15_RS20380 AMD15_RS20395 SM00421 helix_turn_helix, Lux Regulon AMD15_RS20395 SM00448 cheY-homologous receiver domain AMD15_RS20410 SM00382 ATPases associated with a variety of cellular activities AMD15_RS20450 SM00849 Metallo-beta-lactamase superfamily AMD15_RS20480 SM00960 Roadblock/LC7 domain AMD15_RS20545 SM00387 Histidine kinase-like ATPases AMD15_RS20545 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS20550 SM00448 cheY-homologous receiver domain AMD15_RS20550 SM00862 Transcriptional regulatory protein, C terminal AMD15_RS20570 SM00248 ankyrin repeats AMD15_RS20580 SM00491 AMD15_RS20580 AMD15_RS20610 SM00477 DNA/RNA non-specific endonuclease AMD15_RS20610 SM00892 DNA/RNA non-specific endonuclease AMD15_RS20625 SM01004 Delta-aminolevulinic acid dehydratase AMD15_RS20675 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD15_RS20695 SM00382 ATPases associated with a variety of cellular activities AMD15_RS20705 SM00530 Helix-turn-helix XRE-family like proteins AMD15_RS20745 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS20755 SM00382 ATPases associated with a variety of cellular activities AMD15_RS20815 SM00881 CoA binding domain AMD15_RS20820 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD15_RS20820 SM00924 MgtE intracellular N domain AMD15_RS20825 SM01057 Eukaryotic-type carbonic anhydrase AMD15_RS20850 SM00248 ankyrin repeats AMD15_RS20860 SM00825 Beta-ketoacyl synthase AMD15_RS20885 SM00822 AMD15_RS20885 AMD15_RS20930 SM00563 Phosphate acyltransferases AMD15_RS20985 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD15_RS20985 SM00474 3'-5' exonuclease AMD15_RS20985 SM00475 5'-3' exonuclease AMD15_RS20985 SM00482 DNA polymerase A domain AMD15_RS21000 SM00912 haemagglutination activity domain AMD15_RS21020 SM00331 Sigma factor PP2C-like phosphatases AMD15_RS21020 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD15_RS21045 SM00240 Forkhead associated domain AMD15_RS21060 SM00028 Tetratricopeptide repeats AMD15_RS21070 SM00220 Serine/Threonine protein kinases, catalytic domain AMD15_RS21090 SM00965 Secretin and TonB N terminus short domain AMD15_RS21100 SM00915 Jacalin-like lectin domain AMD15_RS21125 SM00382 ATPases associated with a variety of cellular activities AMD15_RS21125 SM01086 C-terminal, D2-small domain, of ClpB protein AMD15_RS21165 SM00342 helix_turn_helix, arabinose operon control protein AMD15_RS21175 SM01266 AMD15_RS21175 AMD15_RS21195 SM00155 Phospholipase D. Active site motifs. AMD15_RS21335 SM00421 helix_turn_helix, Lux Regulon AMD15_RS21335 SM00448 cheY-homologous receiver domain AMD15_RS21390 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD15_RS21410 SM00346 helix_turn_helix isocitrate lyase regulation AMD15_RS21420 SM00091 PAS domain AMD15_RS21420 SM00387 Histidine kinase-like ATPases AMD15_RS21420 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS21420 SM00448 cheY-homologous receiver domain AMD15_RS21450 SM00564 beta-propeller repeat AMD15_RS21505 SM00382 ATPases associated with a variety of cellular activities AMD15_RS21510 SM00836 DALR anticodon binding domain AMD15_RS21520 SM00382 ATPases associated with a variety of cellular activities AMD15_RS21595 SM00354 helix_turn _helix lactose operon repressor AMD15_RS21610 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD15_RS21620 SM00758 AMD15_RS21620 AMD15_RS21620 SM01217 AMD15_RS21620 AMD15_RS21640 SM00612 AMD15_RS21640 AMD15_RS21670 SM01007 Class II Aldolase and Adducin N-terminal domain AMD15_RS21705 SM00633 Glycosyl hydrolase family 10 AMD15_RS21720 SM00633 Glycosyl hydrolase family 10 AMD15_RS21735 SM00633 Glycosyl hydrolase family 10 AMD15_RS21790 SM00829 Enoylreductase AMD15_RS21795 SM00563 Phosphate acyltransferases AMD15_RS21805 SM00354 helix_turn _helix lactose operon repressor AMD15_RS21830 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD15_RS21865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS21865 SM00388 His Kinase A (phosphoacceptor) domain AMD15_RS21880 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD15_RS21880 SM01232 AMD15_RS21880 AMD15_RS21920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS21920 SM00091 PAS domain AMD15_RS21975 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD15_RS22010 SM00155 Phospholipase D. Active site motifs. AMD15_RS22095 SM00796 Allophanate hydrolase subunit 1 AMD15_RS22095 SM00797 Allophanate hydrolase subunit 2 AMD15_RS22095 SM00878 Biotin carboxylase C-terminal domain AMD15_RS22155 SM00382 ATPases associated with a variety of cellular activities AMD15_RS22205 SM00829 Enoylreductase AMD15_RS22245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD15_RS22245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD15_RS22245 SM00091 PAS domain AMD15_RS22245 SM00267 diguanylate cyclase AMD15_RS22275 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD15_RS22300 SM00014 Acid phosphatase homologues AMD15_RS22310 SM00028 Tetratricopeptide repeats