locus-tag class description AMD14_RS00315 PF00150 Cellulase (glycosyl hydrolase family 5) AMD14_RS00325 PF00150 Cellulase (glycosyl hydrolase family 5) AMD14_RS00380 PF00310 Glutamine amidotransferases class-II AMD14_RS00380 PF04898 Glutamate synthase central domain AMD14_RS00380 PF01645 Conserved region in glutamate synthase AMD14_RS00380 PF01493 GXGXG motif AMD14_RS00490 PF11638 DnaA N-terminal domain AMD14_RS00490 PF08299 Bacterial dnaA protein helix-turn-helix AMD14_RS00490 PF00308 Bacterial dnaA protein AMD14_RS00495 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD14_RS00495 PF02767 DNA polymerase III beta subunit, central domain AMD14_RS00495 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD14_RS00500 PF02463 RecF/RecN/SMC N terminal domain AMD14_RS00505 PF00204 DNA gyrase B AMD14_RS00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS00505 PF18053 DNA gyrase B subunit insert domain AMD14_RS00505 PF01751 Toprim domain AMD14_RS00505 PF00986 DNA gyrase B subunit, carboxyl terminus AMD14_RS00515 PF01435 Peptidase family M48 AMD14_RS00525 PF03544 Gram-negative bacterial TonB protein C-terminal AMD14_RS00530 PF01618 MotA/TolQ/ExbB proton channel family AMD14_RS00535 PF02472 Biopolymer transport protein ExbD/TolR AMD14_RS00540 PF02472 Biopolymer transport protein ExbD/TolR AMD14_RS00545 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD14_RS00555 PF13396 Phospholipase_D-nuclease N-terminal AMD14_RS00555 PF13091 PLD-like domain AMD14_RS00570 PF04055 Radical SAM superfamily AMD14_RS00580 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD14_RS00595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD14_RS00595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD14_RS00600 PF13180 PDZ domain AMD14_RS00600 PF03572 Peptidase family S41 AMD14_RS00605 PF01551 Peptidase family M23 AMD14_RS00615 PF04389 Peptidase family M28 AMD14_RS00625 PF00150 Cellulase (glycosyl hydrolase family 5) AMD14_RS00630 PF00150 Cellulase (glycosyl hydrolase family 5) AMD14_RS00635 PF00150 Cellulase (glycosyl hydrolase family 5) AMD14_RS00640 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS00640 PF00107 Zinc-binding dehydrogenase AMD14_RS00645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS00645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD14_RS00650 PF00310 Glutamine amidotransferases class-II AMD14_RS00650 PF04898 Glutamate synthase central domain AMD14_RS00650 PF01645 Conserved region in glutamate synthase AMD14_RS00650 PF01493 GXGXG motif AMD14_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS00680 PF03466 LysR substrate binding domain AMD14_RS00695 PF02397 Bacterial sugar transferase AMD14_RS00700 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD14_RS00710 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD14_RS00715 PF13439 Glycosyltransferase Family 4 AMD14_RS00715 PF00534 Glycosyl transferases group 1 AMD14_RS00735 PF00733 Asparagine synthase AMD14_RS00735 PF13537 Glutamine amidotransferase domain AMD14_RS00750 PF16363 GDP-mannose 4,6 dehydratase AMD14_RS00765 PF00005 ABC transporter AMD14_RS00765 PF00664 ABC transporter transmembrane region AMD14_RS00780 PF00733 Asparagine synthase AMD14_RS00780 PF13537 Glutamine amidotransferase domain AMD14_RS00795 PF02603 HPr Serine kinase N terminus AMD14_RS00795 PF07475 HPr Serine kinase C-terminal domain AMD14_RS00800 PF00685 Sulfotransferase domain AMD14_RS00875 PF00271 Helicase conserved C-terminal domain AMD14_RS00875 PF09369 Domain of unknown function (DUF1998) AMD14_RS00875 PF00270 DEAD/DEAH box helicase AMD14_RS00880 PF03006 Haemolysin-III related AMD14_RS00895 PF00106 short chain dehydrogenase AMD14_RS00905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS00905 PF03466 LysR substrate binding domain AMD14_RS00920 PF02525 Flavodoxin-like fold AMD14_RS00980 PF05532 CsbD-like AMD14_RS01000 PF01447 Thermolysin metallopeptidase, catalytic domain AMD14_RS01000 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD14_RS01000 PF16485 Protealysin propeptide AMD14_RS01010 PF13344 Haloacid dehalogenase-like hydrolase AMD14_RS01010 PF00293 NUDIX domain AMD14_RS01030 PF00085 Thioredoxin AMD14_RS01040 PF08946 Osmosensory transporter coiled coil AMD14_RS01040 PF00083 Sugar (and other) transporter AMD14_RS01080 PF17863 AAA lid domain AMD14_RS01080 PF07726 ATPase family associated with various cellular activities (AAA) AMD14_RS01110 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMD14_RS01115 PF00155 Aminotransferase class I and II AMD14_RS01120 PF00593 TonB dependent receptor AMD14_RS01120 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS01130 PF07883 Cupin domain AMD14_RS01135 PF00171 Aldehyde dehydrogenase family AMD14_RS01155 PF02735 Ku70/Ku80 beta-barrel domain AMD14_RS01160 PF01070 FMN-dependent dehydrogenase AMD14_RS01170 PF00144 Beta-lactamase AMD14_RS01175 PF07730 Histidine kinase AMD14_RS01180 PF00072 Response regulator receiver domain AMD14_RS01180 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS01200 PF18500 CadC C-terminal domain 1 AMD14_RS01200 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS01205 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD14_RS01205 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD14_RS01205 PF07055 Enoyl reductase FAD binding domain AMD14_RS01215 PF00294 pfkB family carbohydrate kinase AMD14_RS01275 PF13333 Integrase core domain AMD14_RS01275 PF13276 HTH-like domain AMD14_RS01275 PF00665 Integrase core domain AMD14_RS01280 PF11896 Domain of unknown function (DUF3416) AMD14_RS01280 PF00128 Alpha amylase, catalytic domain AMD14_RS01285 PF16657 Maltogenic Amylase, C-terminal domain AMD14_RS01285 PF00128 Alpha amylase, catalytic domain AMD14_RS01290 PF02806 Alpha amylase, C-terminal all-beta domain AMD14_RS01290 PF00128 Alpha amylase, catalytic domain AMD14_RS01290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD14_RS01300 PF00248 Aldo/keto reductase family AMD14_RS01305 PF00135 Carboxylesterase family AMD14_RS01310 PF13472 GDSL-like Lipase/Acylhydrolase family AMD14_RS01310 PF07859 alpha/beta hydrolase fold AMD14_RS01320 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD14_RS01330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMD14_RS01335 PF04616 Glycosyl hydrolases family 43 AMD14_RS01335 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD14_RS01340 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS01345 PF04962 KduI/IolB family AMD14_RS01360 PF00657 GDSL-like Lipase/Acylhydrolase AMD14_RS01375 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD14_RS01380 PF01037 Lrp/AsnC ligand binding domain AMD14_RS01385 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS01385 PF07660 Secretin and TonB N terminus short domain AMD14_RS01385 PF00593 TonB dependent receptor AMD14_RS01390 PF01734 Patatin-like phospholipase AMD14_RS01400 PF00005 ABC transporter AMD14_RS01415 PF00005 ABC transporter AMD14_RS01420 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS01430 PF12867 DinB superfamily AMD14_RS01430 PF03781 Sulfatase-modifying factor enzyme 1 AMD14_RS01450 PF01381 Helix-turn-helix AMD14_RS01475 PF01883 Iron-sulfur cluster assembly protein AMD14_RS01475 PF10609 NUBPL iron-transfer P-loop NTPase AMD14_RS01490 PF13091 PLD-like domain AMD14_RS01495 PF03061 Thioesterase superfamily AMD14_RS01525 PF00107 Zinc-binding dehydrogenase AMD14_RS01525 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS01535 PF02673 Bacitracin resistance protein BacA AMD14_RS01540 PF03951 Glutamine synthetase, beta-Grasp domain AMD14_RS01540 PF00120 Glutamine synthetase, catalytic domain AMD14_RS01545 PF00543 Nitrogen regulatory protein P-II AMD14_RS01550 PF00909 Ammonium Transporter Family AMD14_RS01555 PF00989 PAS fold AMD14_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS01555 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS01560 PF02954 Bacterial regulatory protein, Fis family AMD14_RS01560 PF00072 Response regulator receiver domain AMD14_RS01560 PF00158 Sigma-54 interaction domain AMD14_RS01565 PF00080 Copper/zinc superoxide dismutase (SODC) AMD14_RS01570 PF00080 Copper/zinc superoxide dismutase (SODC) AMD14_RS01575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD14_RS01585 PF00108 Thiolase, N-terminal domain AMD14_RS01585 PF02803 Thiolase, C-terminal domain AMD14_RS01620 PF00581 Rhodanese-like domain AMD14_RS01625 PF02556 Preprotein translocase subunit SecB AMD14_RS01630 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD14_RS01630 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD14_RS01640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD14_RS01640 PF00205 Thiamine pyrophosphate enzyme, central domain AMD14_RS01640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD14_RS01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS01650 PF02954 Bacterial regulatory protein, Fis family AMD14_RS01650 PF00158 Sigma-54 interaction domain AMD14_RS01650 PF00072 Response regulator receiver domain AMD14_RS01665 PF07690 Major Facilitator Superfamily AMD14_RS01670 PF00588 SpoU rRNA Methylase family AMD14_RS01685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD14_RS01685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD14_RS01690 PF13784 Fic/DOC family N-terminal AMD14_RS01690 PF02661 Fic/DOC family AMD14_RS01695 PF00561 alpha/beta hydrolase fold AMD14_RS01700 PF03692 Putative zinc- or iron-chelating domain AMD14_RS01705 PF00501 AMP-binding enzyme AMD14_RS01710 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD14_RS01725 PF01820 D-ala D-ala ligase N-terminus AMD14_RS01725 PF07478 D-ala D-ala ligase C-terminus AMD14_RS01735 PF03109 ABC1 family AMD14_RS01745 PF00849 RNA pseudouridylate synthase AMD14_RS01755 PF00472 RF-1 domain AMD14_RS01765 PF01112 Asparaginase AMD14_RS01770 PF01432 Peptidase family M3 AMD14_RS01775 PF12706 Beta-lactamase superfamily domain AMD14_RS01795 PF12833 Helix-turn-helix domain AMD14_RS01800 PF00999 Sodium/hydrogen exchanger family AMD14_RS01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS01805 PF03466 LysR substrate binding domain AMD14_RS01810 PF01274 Malate synthase AMD14_RS01815 PF00463 Isocitrate lyase family AMD14_RS01820 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS01840 PF00326 Prolyl oligopeptidase family AMD14_RS01845 PF00364 Biotin-requiring enzyme AMD14_RS01845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD14_RS01845 PF00289 Biotin carboxylase, N-terminal domain AMD14_RS01845 PF02785 Biotin carboxylase C-terminal domain AMD14_RS01845 PF18140 Propionyl-coenzyme A carboxylase BT domain AMD14_RS01850 PF01039 Carboxyl transferase domain AMD14_RS01855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD14_RS01855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD14_RS01855 PF02770 Acyl-CoA dehydrogenase, middle domain AMD14_RS01910 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD14_RS01910 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD14_RS01935 PF03969 AFG1-like ATPase AMD14_RS01940 PF01047 MarR family AMD14_RS01945 PF02566 OsmC-like protein AMD14_RS01975 PF00107 Zinc-binding dehydrogenase AMD14_RS01975 PF16884 N-terminal domain of oxidoreductase AMD14_RS01980 PF00248 Aldo/keto reductase family AMD14_RS01990 PF00849 RNA pseudouridylate synthase AMD14_RS01995 PF00593 TonB dependent receptor AMD14_RS02005 PF04408 Helicase associated domain (HA2) AMD14_RS02005 PF08482 ATP-dependent helicase C-terminal AMD14_RS02005 PF00270 DEAD/DEAH box helicase AMD14_RS02005 PF00271 Helicase conserved C-terminal domain AMD14_RS02015 PF07308 Protein of unknown function (DUF1456) AMD14_RS02020 PF00576 HIUase/Transthyretin family AMD14_RS02025 PF13454 FAD-NAD(P)-binding AMD14_RS02030 PF01014 Uricase AMD14_RS02030 PF09349 OHCU decarboxylase AMD14_RS02045 PF00266 Aminotransferase class-V AMD14_RS02050 PF07687 Peptidase dimerisation domain AMD14_RS02050 PF01546 Peptidase family M20/M25/M40 AMD14_RS02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS02055 PF03466 LysR substrate binding domain AMD14_RS02060 PF07690 Major Facilitator Superfamily AMD14_RS02075 PF01425 Amidase AMD14_RS02080 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD14_RS02090 PF00860 Permease family AMD14_RS02100 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD14_RS02105 PF00355 Rieske [2Fe-2S] domain AMD14_RS02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS02110 PF03466 LysR substrate binding domain AMD14_RS02115 PF01026 TatD related DNase AMD14_RS02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS02130 PF03466 LysR substrate binding domain AMD14_RS02135 PF07690 Major Facilitator Superfamily AMD14_RS02150 PF02146 Sir2 family AMD14_RS02155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD14_RS02160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD14_RS02160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD14_RS02170 PF00551 Formyl transferase AMD14_RS02175 PF00072 Response regulator receiver domain AMD14_RS02175 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS02180 PF00672 HAMP domain AMD14_RS02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS02180 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS02185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS02185 PF00529 HlyD membrane-fusion protein of T1SS AMD14_RS02190 PF00873 AcrB/AcrD/AcrF family AMD14_RS02195 PF02321 Outer membrane efflux protein AMD14_RS02205 PF02219 Methylenetetrahydrofolate reductase AMD14_RS02210 PF02677 Epoxyqueuosine reductase QueH AMD14_RS02215 PF03466 LysR substrate binding domain AMD14_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS02220 PF03358 NADPH-dependent FMN reductase AMD14_RS02230 PF08267 Cobalamin-independent synthase, N-terminal domain AMD14_RS02230 PF01717 Cobalamin-independent synthase, Catalytic domain AMD14_RS02235 PF03812 2-keto-3-deoxygluconate permease AMD14_RS02245 PF05368 NmrA-like family AMD14_RS02250 PF01638 HxlR-like helix-turn-helix AMD14_RS02275 PF13276 HTH-like domain AMD14_RS02275 PF13333 Integrase core domain AMD14_RS02275 PF00665 Integrase core domain AMD14_RS02285 PF00589 Phage integrase family AMD14_RS02285 PF13495 Phage integrase, N-terminal SAM-like domain AMD14_RS02290 PF00920 Dehydratase family AMD14_RS02310 PF00132 Bacterial transferase hexapeptide (six repeats) AMD14_RS02320 PF07690 Major Facilitator Superfamily AMD14_RS02325 PF11871 Domain of unknown function (DUF3391) AMD14_RS02325 PF01966 HD domain AMD14_RS02345 PF00171 Aldehyde dehydrogenase family AMD14_RS02355 PF01494 FAD binding domain AMD14_RS02365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD14_RS02365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD14_RS02370 PF00230 Major intrinsic protein AMD14_RS02375 PF01266 FAD dependent oxidoreductase AMD14_RS02375 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMD14_RS02380 PF00455 DeoR C terminal sensor domain AMD14_RS02380 PF08220 DeoR-like helix-turn-helix domain AMD14_RS02385 PF00970 Oxidoreductase FAD-binding domain AMD14_RS02385 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD14_RS02390 PF00355 Rieske [2Fe-2S] domain AMD14_RS02395 PF01144 Coenzyme A transferase AMD14_RS02400 PF01144 Coenzyme A transferase AMD14_RS02405 PF00108 Thiolase, N-terminal domain AMD14_RS02405 PF02803 Thiolase, C-terminal domain AMD14_RS02410 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD14_RS02410 PF00775 Dioxygenase AMD14_RS02420 PF10397 Adenylosuccinate lyase C-terminus AMD14_RS02420 PF00206 Lyase AMD14_RS02425 PF12146 Serine aminopeptidase, S33 AMD14_RS02430 PF02627 Carboxymuconolactone decarboxylase family AMD14_RS02440 PF09339 IclR helix-turn-helix domain AMD14_RS02440 PF01614 Bacterial transcriptional regulator AMD14_RS02450 PF07859 alpha/beta hydrolase fold AMD14_RS02455 PF10677 Protein of unknown function (DUF2490) AMD14_RS02460 PF13932 GidA associated domain AMD14_RS02460 PF01134 Glucose inhibited division protein A AMD14_RS02470 PF00291 Pyridoxal-phosphate dependent enzyme AMD14_RS02490 PF13649 Methyltransferase domain AMD14_RS02500 PF12697 Alpha/beta hydrolase family AMD14_RS02510 PF00155 Aminotransferase class I and II AMD14_RS02515 PF04055 Radical SAM superfamily AMD14_RS02515 PF06968 Biotin and Thiamin Synthesis associated domain AMD14_RS02525 PF01040 UbiA prenyltransferase family AMD14_RS02540 PF05819 NolX protein AMD14_RS02575 PF01313 Bacterial export proteins, family 3 AMD14_RS02580 PF00813 FliP family AMD14_RS02595 PF00771 FHIPEP family AMD14_RS02600 PF01312 FlhB HrpN YscU SpaS Family AMD14_RS02615 PF01514 Secretory protein of YscJ/FliF family AMD14_RS02630 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD14_RS02630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD14_RS02630 PF18269 T3SS EscN ATPase C-terminal domain AMD14_RS02640 PF01311 Bacterial export proteins, family 1 AMD14_RS02645 PF00263 Bacterial type II and III secretion system protein AMD14_RS02645 PF03958 Bacterial type II/III secretion system short domain AMD14_RS02655 PF01464 Transglycosylase SLT domain AMD14_RS02670 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMD14_RS02670 PF00924 Mechanosensitive ion channel AMD14_RS02670 PF12795 Mechanosensitive ion channel porin domain AMD14_RS02675 PF00884 Sulfatase AMD14_RS02680 PF03109 ABC1 family AMD14_RS02685 PF05661 Protein of unknown function (DUF808) AMD14_RS02690 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS02695 PF00534 Glycosyl transferases group 1 AMD14_RS02695 PF08323 Starch synthase catalytic domain AMD14_RS02700 PF00128 Alpha amylase, catalytic domain AMD14_RS02700 PF02806 Alpha amylase, C-terminal all-beta domain AMD14_RS02700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD14_RS02705 PF00128 Alpha amylase, catalytic domain AMD14_RS02705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD14_RS02705 PF11941 Domain of unknown function (DUF3459) AMD14_RS02710 PF02446 4-alpha-glucanotransferase AMD14_RS02715 PF00128 Alpha amylase, catalytic domain AMD14_RS02725 PF00128 Alpha amylase, catalytic domain AMD14_RS02725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD14_RS02730 PF13460 NAD(P)H-binding AMD14_RS02750 PF06903 VirK protein AMD14_RS02755 PF02321 Outer membrane efflux protein AMD14_RS02770 PF00873 AcrB/AcrD/AcrF family AMD14_RS02785 PF00271 Helicase conserved C-terminal domain AMD14_RS02785 PF00270 DEAD/DEAH box helicase AMD14_RS02790 PF00364 Biotin-requiring enzyme AMD14_RS02790 PF02817 e3 binding domain AMD14_RS02790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD14_RS02800 PF02780 Transketolase, C-terminal domain AMD14_RS02800 PF02779 Transketolase, pyrimidine binding domain AMD14_RS02805 PF00676 Dehydrogenase E1 component AMD14_RS02815 PF03301 Tryptophan 2,3-dioxygenase AMD14_RS02820 PF00854 POT family AMD14_RS02830 PF01047 MarR family AMD14_RS02835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD14_RS02840 PF04209 homogentisate 1,2-dioxygenase AMD14_RS02855 PF03334 Na+/H+ antiporter subunit AMD14_RS02860 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMD14_RS02870 PF00361 Proton-conducting membrane transporter AMD14_RS02875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD14_RS02880 PF00361 Proton-conducting membrane transporter AMD14_RS02880 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMD14_RS02880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD14_RS02880 PF13244 Domain of unknown function (DUF4040) AMD14_RS02895 PF01483 Proprotein convertase P-domain AMD14_RS02895 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD14_RS02895 PF01447 Thermolysin metallopeptidase, catalytic domain AMD14_RS02895 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD14_RS02900 PF00182 Chitinase class I AMD14_RS02920 PF01259 SAICAR synthetase AMD14_RS02925 PF05099 Tellurite resistance protein TerB AMD14_RS02925 PF00226 DnaJ domain AMD14_RS02935 PF00834 Ribulose-phosphate 3 epimerase family AMD14_RS02940 PF00583 Acetyltransferase (GNAT) family AMD14_RS02945 PF00781 Diacylglycerol kinase catalytic domain AMD14_RS02950 PF04715 Anthranilate synthase component I, N terminal region AMD14_RS02950 PF00425 chorismate binding enzyme AMD14_RS02960 PF00117 Glutamine amidotransferase class-I AMD14_RS02970 PF02885 Glycosyl transferase family, helical bundle domain AMD14_RS02970 PF00591 Glycosyl transferase family, a/b domain AMD14_RS02975 PF00218 Indole-3-glycerol phosphate synthase AMD14_RS02985 PF00325 Bacterial regulatory proteins, crp family AMD14_RS02985 PF00027 Cyclic nucleotide-binding domain AMD14_RS02990 PF02675 S-adenosylmethionine decarboxylase AMD14_RS02995 PF00893 Small Multidrug Resistance protein AMD14_RS03000 PF03232 Ubiquinone biosynthesis protein COQ7 AMD14_RS03005 PF00572 Ribosomal protein L13 AMD14_RS03010 PF00380 Ribosomal protein S9/S16 AMD14_RS03025 PF00293 NUDIX domain AMD14_RS03035 PF00210 Ferritin-like domain AMD14_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS03040 PF01627 Hpt domain AMD14_RS03040 PF00072 Response regulator receiver domain AMD14_RS03040 PF00672 HAMP domain AMD14_RS03040 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS03040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD14_RS03045 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS03045 PF00072 Response regulator receiver domain AMD14_RS03065 PF01521 Iron-sulphur cluster biosynthesis AMD14_RS03085 PF09297 NADH pyrophosphatase zinc ribbon domain AMD14_RS03085 PF00293 NUDIX domain AMD14_RS03085 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD14_RS03090 PF17113 Regulatory signalling modulator protein AmpE AMD14_RS03090 PF03186 CobD/Cbib protein AMD14_RS03110 PF07690 Major Facilitator Superfamily AMD14_RS03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS03115 PF03466 LysR substrate binding domain AMD14_RS03120 PF07690 Major Facilitator Superfamily AMD14_RS03125 PF12805 FUSC-like inner membrane protein yccS AMD14_RS03135 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD14_RS03135 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD14_RS03135 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD14_RS03145 PF02142 MGS-like domain AMD14_RS03145 PF01808 AICARFT/IMPCHase bienzyme AMD14_RS03150 PF01066 CDP-alcohol phosphatidyltransferase AMD14_RS03155 PF12147 Putative methyltransferase AMD14_RS03155 PF12146 Serine aminopeptidase, S33 AMD14_RS03160 PF00782 Dual specificity phosphatase, catalytic domain AMD14_RS03190 PF02954 Bacterial regulatory protein, Fis family AMD14_RS03205 PF01381 Helix-turn-helix AMD14_RS03230 PF00289 Biotin carboxylase, N-terminal domain AMD14_RS03230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD14_RS03230 PF02785 Biotin carboxylase C-terminal domain AMD14_RS03240 PF00364 Biotin-requiring enzyme AMD14_RS03245 PF01220 Dehydroquinase class II AMD14_RS03250 PF11412 Disulphide bond corrector protein DsbC AMD14_RS03250 PF02683 Cytochrome C biogenesis protein transmembrane region AMD14_RS03255 PF03091 CutA1 divalent ion tolerance protein AMD14_RS03270 PF01852 START domain AMD14_RS03280 PF00106 short chain dehydrogenase AMD14_RS03285 PF04231 Endonuclease I AMD14_RS03290 PF00166 Chaperonin 10 Kd subunit AMD14_RS03295 PF00118 TCP-1/cpn60 chaperonin family AMD14_RS03305 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS03305 PF00593 TonB dependent receptor AMD14_RS03310 PF00793 DAHP synthetase I family AMD14_RS03325 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD14_RS03335 PF08335 GlnD PII-uridylyltransferase AMD14_RS03335 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD14_RS03340 PF02592 Putative vitamin uptake transporter AMD14_RS03360 PF00881 Nitroreductase family AMD14_RS03365 PF04264 YceI-like domain AMD14_RS03390 PF16957 Malonate decarboxylase, alpha subunit, transporter AMD14_RS03395 PF06857 Malonate decarboxylase delta subunit (MdcD) AMD14_RS03400 PF01039 Carboxyl transferase domain AMD14_RS03410 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AMD14_RS03415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD14_RS03420 PF00698 Acyl transferase domain AMD14_RS03430 PF07729 FCD domain AMD14_RS03430 PF00392 Bacterial regulatory proteins, gntR family AMD14_RS03435 PF13419 Haloacid dehalogenase-like hydrolase AMD14_RS03465 PF07745 Glycosyl hydrolase family 53 AMD14_RS03470 PF17831 Pyruvate dehydrogenase E1 component middle domain AMD14_RS03470 PF00456 Transketolase, thiamine diphosphate binding domain AMD14_RS03475 PF13333 Integrase core domain AMD14_RS03475 PF00665 Integrase core domain AMD14_RS03475 PF13276 HTH-like domain AMD14_RS03485 PF00106 short chain dehydrogenase AMD14_RS03500 PF00106 short chain dehydrogenase AMD14_RS03510 PF13409 Glutathione S-transferase, N-terminal domain AMD14_RS03535 PF12823 Domain of unknown function (DUF3817) AMD14_RS03535 PF03176 MMPL family AMD14_RS03540 PF00326 Prolyl oligopeptidase family AMD14_RS03540 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD14_RS03545 PF07759 Protein of unknown function (DUF1615) AMD14_RS03555 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS03580 PF00892 EamA-like transporter family AMD14_RS03585 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD14_RS03595 PF00324 Amino acid permease AMD14_RS03605 PF01544 CorA-like Mg2+ transporter protein AMD14_RS03615 PF01204 Trehalase AMD14_RS03625 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD14_RS03625 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD14_RS03650 PF08447 PAS fold AMD14_RS03650 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS03650 PF00563 EAL domain AMD14_RS03650 PF08448 PAS fold AMD14_RS03655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS03655 PF00672 HAMP domain AMD14_RS03655 PF02203 Tar ligand binding domain homologue AMD14_RS03660 PF00150 Cellulase (glycosyl hydrolase family 5) AMD14_RS03660 PF00553 Cellulose binding domain AMD14_RS03665 PF01740 STAS domain AMD14_RS03665 PF00916 Sulfate permease family AMD14_RS03675 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS03690 PF13632 Glycosyl transferase family group 2 AMD14_RS03700 PF06580 Histidine kinase AMD14_RS03700 PF07694 5TMR of 5TMR-LYT AMD14_RS03705 PF00072 Response regulator receiver domain AMD14_RS03705 PF04397 LytTr DNA-binding domain AMD14_RS03710 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD14_RS03710 PF03900 Porphobilinogen deaminase, C-terminal domain AMD14_RS03735 PF00326 Prolyl oligopeptidase family AMD14_RS03735 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD14_RS03745 PF00155 Aminotransferase class I and II AMD14_RS03750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD14_RS03750 PF00326 Prolyl oligopeptidase family AMD14_RS03755 PF04304 Protein of unknown function (DUF454) AMD14_RS03765 PF01678 Diaminopimelate epimerase AMD14_RS03775 PF00589 Phage integrase family AMD14_RS03775 PF02899 Phage integrase, N-terminal SAM-like domain AMD14_RS03780 PF00227 Proteasome subunit AMD14_RS03785 PF10431 C-terminal, D2-small domain, of ClpB protein AMD14_RS03785 PF00004 ATPase family associated with various cellular activities (AAA) AMD14_RS03785 PF07724 AAA domain (Cdc48 subfamily) AMD14_RS03795 PF13673 Acetyltransferase (GNAT) domain AMD14_RS03800 PF13533 Biotin-lipoyl like AMD14_RS03810 PF01209 ubiE/COQ5 methyltransferase family AMD14_RS03815 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS03815 PF00563 EAL domain AMD14_RS03815 PF03707 Bacterial signalling protein N terminal repeat AMD14_RS03820 PF01433 Peptidase family M1 domain AMD14_RS03820 PF11838 ERAP1-like C-terminal domain AMD14_RS03840 PF13360 PQQ-like domain AMD14_RS03845 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD14_RS03860 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS03860 PF00107 Zinc-binding dehydrogenase AMD14_RS03870 PF00158 Sigma-54 interaction domain AMD14_RS03870 PF02954 Bacterial regulatory protein, Fis family AMD14_RS03870 PF01590 GAF domain AMD14_RS03875 PF00294 pfkB family carbohydrate kinase AMD14_RS03885 PF04085 rod shape-determining protein MreC AMD14_RS03895 PF03717 Penicillin-binding Protein dimerisation domain AMD14_RS03895 PF00905 Penicillin binding protein transpeptidase domain AMD14_RS03900 PF01098 Cell cycle protein AMD14_RS03905 PF00295 Glycosyl hydrolases family 28 AMD14_RS03910 PF13406 Transglycosylase SLT domain AMD14_RS03915 PF05036 Sporulation related domain AMD14_RS03915 PF03330 Lytic transglycolase AMD14_RS03925 PF07943 Penicillin-binding protein 5, C-terminal domain AMD14_RS03925 PF00768 D-alanyl-D-alanine carboxypeptidase AMD14_RS03935 PF04359 Protein of unknown function (DUF493) AMD14_RS03940 PF03099 Biotin/lipoate A/B protein ligase family AMD14_RS03945 PF04055 Radical SAM superfamily AMD14_RS03945 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMD14_RS03950 PF17804 Tail specific protease N-terminal domain AMD14_RS03950 PF03572 Peptidase family S41 AMD14_RS03950 PF00595 PDZ domain AMD14_RS03950 PF11818 C-terminal domain of tail specific protease (DUF3340) AMD14_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS03960 PF03466 LysR substrate binding domain AMD14_RS03970 PF01467 Cytidylyltransferase-like AMD14_RS03970 PF00293 NUDIX domain AMD14_RS04005 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD14_RS04005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD14_RS04010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD14_RS04010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD14_RS04015 PF04972 BON domain AMD14_RS04020 PF00360 Phytochrome region AMD14_RS04020 PF08446 PAS fold AMD14_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS04020 PF01590 GAF domain AMD14_RS04020 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS04025 PF00072 Response regulator receiver domain AMD14_RS04030 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS04035 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD14_RS04080 PF00263 Bacterial type II and III secretion system protein AMD14_RS04080 PF03958 Bacterial type II/III secretion system short domain AMD14_RS04085 PF00437 Type II/IV secretion system protein AMD14_RS04090 PF00482 Type II secretion system (T2SS), protein F AMD14_RS04095 PF08334 Type II secretion system (T2SS), protein G AMD14_RS04095 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS04100 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS04100 PF12019 Type II transport protein GspH AMD14_RS04105 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS04105 PF02501 Type II secretion system (T2SS), protein I AMD14_RS04110 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS04110 PF11612 Type II secretion system (T2SS), protein J AMD14_RS04115 PF03934 Type II secretion system (T2SS), protein K AMD14_RS04155 PF00392 Bacterial regulatory proteins, gntR family AMD14_RS04155 PF07702 UTRA domain AMD14_RS04160 PF07690 Major Facilitator Superfamily AMD14_RS04165 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS04170 PF01380 SIS domain AMD14_RS04175 PF01979 Amidohydrolase family AMD14_RS04185 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD14_RS04185 PF01743 Poly A polymerase head domain AMD14_RS04185 PF01966 HD domain AMD14_RS04190 PF05199 GMC oxidoreductase AMD14_RS04190 PF00732 GMC oxidoreductase AMD14_RS04195 PF00171 Aldehyde dehydrogenase family AMD14_RS04200 PF02028 BCCT, betaine/carnitine/choline family transporter AMD14_RS04210 PF01323 DSBA-like thioredoxin domain AMD14_RS04220 PF00034 Cytochrome c AMD14_RS04225 PF01926 50S ribosome-binding GTPase AMD14_RS04230 PF10996 Beta-Casp domain AMD14_RS04230 PF00753 Metallo-beta-lactamase superfamily AMD14_RS04230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMD14_RS04240 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD14_RS04245 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS04245 PF00672 HAMP domain AMD14_RS04250 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS04250 PF00072 Response regulator receiver domain AMD14_RS04265 PF02583 Metal-sensitive transcriptional repressor AMD14_RS04270 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS04270 PF00107 Zinc-binding dehydrogenase AMD14_RS04275 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD14_RS04280 PF00756 Putative esterase AMD14_RS04290 PF00392 Bacterial regulatory proteins, gntR family AMD14_RS04290 PF00155 Aminotransferase class I and II AMD14_RS04295 PF02567 Phenazine biosynthesis-like protein AMD14_RS04300 PF00892 EamA-like transporter family AMD14_RS04310 PF00005 ABC transporter AMD14_RS04310 PF12848 ABC transporter AMD14_RS04320 PF00464 Serine hydroxymethyltransferase AMD14_RS04325 PF03477 ATP cone domain AMD14_RS04335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD14_RS04335 PF01872 RibD C-terminal domain AMD14_RS04345 PF00677 Lumazine binding domain AMD14_RS04350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD14_RS04350 PF00925 GTP cyclohydrolase II AMD14_RS04355 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD14_RS04360 PF01029 NusB family AMD14_RS04365 PF00586 AIR synthase related protein, N-terminal domain AMD14_RS04365 PF02769 AIR synthase related protein, C-terminal domain AMD14_RS04385 PF03814 Potassium-transporting ATPase A subunit AMD14_RS04395 PF02669 K+-transporting ATPase, c chain AMD14_RS04400 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD14_RS04400 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS04400 PF13492 GAF domain AMD14_RS04400 PF13493 Domain of unknown function (DUF4118) AMD14_RS04405 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS04405 PF00072 Response regulator receiver domain AMD14_RS04420 PF02913 FAD linked oxidases, C-terminal domain AMD14_RS04420 PF01565 FAD binding domain AMD14_RS04425 PF04307 LexA-binding, inner membrane-associated putative hydrolase AMD14_RS04430 PF02021 Uncharacterised protein family UPF0102 AMD14_RS04440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD14_RS04455 PF02381 MraZ protein, putative antitoxin-like AMD14_RS04460 PF01795 MraW methylase family AMD14_RS04465 PF04999 Cell division protein FtsL AMD14_RS04470 PF03717 Penicillin-binding Protein dimerisation domain AMD14_RS04470 PF00905 Penicillin binding protein transpeptidase domain AMD14_RS04475 PF08245 Mur ligase middle domain AMD14_RS04475 PF01225 Mur ligase family, catalytic domain AMD14_RS04475 PF02875 Mur ligase family, glutamate ligase domain AMD14_RS04480 PF02875 Mur ligase family, glutamate ligase domain AMD14_RS04480 PF08245 Mur ligase middle domain AMD14_RS04480 PF01225 Mur ligase family, catalytic domain AMD14_RS04485 PF00953 Glycosyl transferase family 4 AMD14_RS04490 PF01098 Cell cycle protein AMD14_RS04495 PF04101 Glycosyltransferase family 28 C-terminal domain AMD14_RS04495 PF03033 Glycosyltransferase family 28 N-terminal domain AMD14_RS04500 PF02875 Mur ligase family, glutamate ligase domain AMD14_RS04500 PF08245 Mur ligase middle domain AMD14_RS04500 PF01225 Mur ligase family, catalytic domain AMD14_RS04505 PF07478 D-ala D-ala ligase C-terminus AMD14_RS04505 PF01820 D-ala D-ala ligase N-terminus AMD14_RS04510 PF08478 POTRA domain, FtsQ-type AMD14_RS04510 PF03799 Cell division protein FtsQ AMD14_RS04515 PF02491 SHS2 domain inserted in FTSA AMD14_RS04520 PF12327 FtsZ family, C-terminal domain AMD14_RS04520 PF00091 Tubulin/FtsZ family, GTPase domain AMD14_RS04525 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD14_RS04535 PF01551 Peptidase family M23 AMD14_RS04535 PF08525 Opacity-associated protein A N-terminal motif AMD14_RS04535 PF01476 LysM domain AMD14_RS04540 PF07516 SecA Wing and Scaffold domain AMD14_RS04540 PF07517 SecA DEAD-like domain AMD14_RS04540 PF02810 SEC-C motif AMD14_RS04540 PF01043 SecA preprotein cross-linking domain AMD14_RS04545 PF00293 NUDIX domain AMD14_RS04555 PF02219 Methylenetetrahydrofolate reductase AMD14_RS04565 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD14_RS04565 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD14_RS04565 PF08659 KR domain AMD14_RS04565 PF00550 Phosphopantetheine attachment site AMD14_RS04565 PF14765 Polyketide synthase dehydratase AMD14_RS04565 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS04565 PF00107 Zinc-binding dehydrogenase AMD14_RS04565 PF00698 Acyl transferase domain AMD14_RS04565 PF16197 Ketoacyl-synthetase C-terminal extension AMD14_RS04570 PF00082 Subtilase family AMD14_RS04570 PF09286 Pro-kumamolisin, activation domain AMD14_RS04580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD14_RS04585 PF00128 Alpha amylase, catalytic domain AMD14_RS04615 PF13649 Methyltransferase domain AMD14_RS04620 PF05221 S-adenosyl-L-homocysteine hydrolase AMD14_RS04620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD14_RS04630 PF00311 Phosphoenolpyruvate carboxylase AMD14_RS04660 PF00328 Histidine phosphatase superfamily (branch 2) AMD14_RS04665 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD14_RS04665 PF02772 S-adenosylmethionine synthetase, central domain AMD14_RS04665 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD14_RS04675 PF13649 Methyltransferase domain AMD14_RS04680 PF01207 Dihydrouridine synthase (Dus) AMD14_RS04690 PF00294 pfkB family carbohydrate kinase AMD14_RS04695 PF07662 Na+ dependent nucleoside transporter C-terminus AMD14_RS04695 PF07670 Nucleoside recognition AMD14_RS04695 PF01773 Na+ dependent nucleoside transporter N-terminus AMD14_RS04700 PF00248 Aldo/keto reductase family AMD14_RS04710 PF00593 TonB dependent receptor AMD14_RS04710 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS04730 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS04735 PF00005 ABC transporter AMD14_RS04745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD14_RS04755 PF00005 ABC transporter AMD14_RS04760 PF13472 GDSL-like Lipase/Acylhydrolase family AMD14_RS04765 PF00072 Response regulator receiver domain AMD14_RS04765 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS04770 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS04770 PF08521 Two-component sensor kinase N-terminal AMD14_RS04780 PF01219 Prokaryotic diacylglycerol kinase AMD14_RS04800 PF01790 Prolipoprotein diacylglyceryl transferase AMD14_RS04805 PF00303 Thymidylate synthase AMD14_RS04815 PF00186 Dihydrofolate reductase AMD14_RS04820 PF00158 Sigma-54 interaction domain AMD14_RS04825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD14_RS04825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD14_RS04830 PF00005 ABC transporter AMD14_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS04845 PF00296 Luciferase-like monooxygenase AMD14_RS04850 PF03358 NADPH-dependent FMN reductase AMD14_RS04870 PF00296 Luciferase-like monooxygenase AMD14_RS04875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD14_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS04885 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS04885 PF12911 N-terminal TM domain of oligopeptide transport permease C AMD14_RS04890 PF00005 ABC transporter AMD14_RS04890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD14_RS04895 PF00149 Calcineurin-like phosphoesterase AMD14_RS04900 PF04379 ApaG domain AMD14_RS04905 PF00398 Ribosomal RNA adenine dimethylase AMD14_RS04910 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD14_RS04915 PF00639 PPIC-type PPIASE domain AMD14_RS04915 PF09312 SurA N-terminal domain AMD14_RS04920 PF04453 LPS transport system D AMD14_RS04920 PF03968 OstA-like protein AMD14_RS04930 PF00850 Histone deacetylase domain AMD14_RS04935 PF01923 Cobalamin adenosyltransferase AMD14_RS04945 PF01494 FAD binding domain AMD14_RS04950 PF01494 FAD binding domain AMD14_RS04970 PF00392 Bacterial regulatory proteins, gntR family AMD14_RS04970 PF07729 FCD domain AMD14_RS04975 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD14_RS04980 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD14_RS04980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD14_RS04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS04985 PF03466 LysR substrate binding domain AMD14_RS04990 PF00501 AMP-binding enzyme AMD14_RS04990 PF13193 AMP-binding enzyme C-terminal domain AMD14_RS04995 PF00171 Aldehyde dehydrogenase family AMD14_RS05000 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS05020 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD14_RS05025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD14_RS05025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD14_RS05030 PF18125 RlmM ferredoxin-like domain AMD14_RS05030 PF01728 FtsJ-like methyltransferase AMD14_RS05055 PF00892 EamA-like transporter family AMD14_RS05065 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD14_RS05065 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD14_RS05080 PF00072 Response regulator receiver domain AMD14_RS05080 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS05085 PF00672 HAMP domain AMD14_RS05085 PF00072 Response regulator receiver domain AMD14_RS05085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS05085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD14_RS05085 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS05085 PF01627 Hpt domain AMD14_RS05090 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS05090 PF00072 Response regulator receiver domain AMD14_RS05100 PF01625 Peptide methionine sulfoxide reductase AMD14_RS05110 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMD14_RS05115 PF14760 Rnk N-terminus AMD14_RS05115 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD14_RS05120 PF03466 LysR substrate binding domain AMD14_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS05125 PF13192 Thioredoxin domain AMD14_RS05130 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD14_RS05130 PF00578 AhpC/TSA family AMD14_RS05135 PF17827 PrmC N-terminal domain AMD14_RS05135 PF05175 Methyltransferase small domain AMD14_RS05140 PF00561 alpha/beta hydrolase fold AMD14_RS05150 PF00293 NUDIX domain AMD14_RS05155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD14_RS05155 PF00476 DNA polymerase family A AMD14_RS05155 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD14_RS05155 PF01612 3'-5' exonuclease AMD14_RS05185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD14_RS05185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD14_RS05185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD14_RS05210 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD14_RS05215 PF02233 NAD(P) transhydrogenase beta subunit AMD14_RS05230 PF01063 Amino-transferase class IV AMD14_RS05235 PF04151 Bacterial pre-peptidase C-terminal domain AMD14_RS05235 PF00082 Subtilase family AMD14_RS05240 PF00082 Subtilase family AMD14_RS05240 PF04151 Bacterial pre-peptidase C-terminal domain AMD14_RS05245 PF04151 Bacterial pre-peptidase C-terminal domain AMD14_RS05245 PF00082 Subtilase family AMD14_RS05250 PF04073 Aminoacyl-tRNA editing domain AMD14_RS05270 PF03358 NADPH-dependent FMN reductase AMD14_RS05275 PF03631 Virulence factor BrkB AMD14_RS05280 PF08534 Redoxin AMD14_RS05285 PF00708 Acylphosphatase AMD14_RS05295 PF03976 Polyphosphate kinase 2 (PPK2) AMD14_RS05300 PF00994 Probable molybdopterin binding domain AMD14_RS05310 PF03462 PCRF domain AMD14_RS05310 PF00472 RF-1 domain AMD14_RS05315 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD14_RS05315 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD14_RS05315 PF01488 Shikimate / quinate 5-dehydrogenase AMD14_RS05325 PF03550 Outer membrane lipoprotein LolB AMD14_RS05330 PF00288 GHMP kinases N terminal domain AMD14_RS05330 PF08544 GHMP kinases C terminal AMD14_RS05340 PF14572 Phosphoribosyl synthetase-associated domain AMD14_RS05340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD14_RS05345 PF14693 Ribosomal protein TL5, C-terminal domain AMD14_RS05345 PF01386 Ribosomal L25p family AMD14_RS05350 PF01195 Peptidyl-tRNA hydrolase AMD14_RS05355 PF01926 50S ribosome-binding GTPase AMD14_RS05355 PF06071 Protein of unknown function (DUF933) AMD14_RS05375 PF03144 Elongation factor Tu domain 2 AMD14_RS05375 PF03143 Elongation factor Tu C-terminal domain AMD14_RS05375 PF00009 Elongation factor Tu GTP binding domain AMD14_RS05385 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD14_RS05390 PF02357 Transcription termination factor nusG AMD14_RS05390 PF00467 KOW motif AMD14_RS05395 PF03946 Ribosomal protein L11, N-terminal domain AMD14_RS05395 PF00298 Ribosomal protein L11, RNA binding domain AMD14_RS05400 PF00687 Ribosomal protein L1p/L10e family AMD14_RS05405 PF00466 Ribosomal protein L10 AMD14_RS05410 PF16320 Ribosomal protein L7/L12 dimerisation domain AMD14_RS05410 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD14_RS05415 PF04563 RNA polymerase beta subunit AMD14_RS05415 PF04561 RNA polymerase Rpb2, domain 2 AMD14_RS05415 PF04565 RNA polymerase Rpb2, domain 3 AMD14_RS05415 PF10385 RNA polymerase beta subunit external 1 domain AMD14_RS05415 PF04560 RNA polymerase Rpb2, domain 7 AMD14_RS05415 PF00562 RNA polymerase Rpb2, domain 6 AMD14_RS05420 PF05000 RNA polymerase Rpb1, domain 4 AMD14_RS05420 PF04983 RNA polymerase Rpb1, domain 3 AMD14_RS05420 PF00623 RNA polymerase Rpb1, domain 2 AMD14_RS05420 PF04997 RNA polymerase Rpb1, domain 1 AMD14_RS05420 PF04998 RNA polymerase Rpb1, domain 5 AMD14_RS05425 PF00164 Ribosomal protein S12/S23 AMD14_RS05430 PF00177 Ribosomal protein S7p/S5e AMD14_RS05435 PF00009 Elongation factor Tu GTP binding domain AMD14_RS05435 PF03764 Elongation factor G, domain IV AMD14_RS05435 PF14492 Elongation Factor G, domain II AMD14_RS05435 PF03144 Elongation factor Tu domain 2 AMD14_RS05435 PF00679 Elongation factor G C-terminus AMD14_RS05440 PF00009 Elongation factor Tu GTP binding domain AMD14_RS05440 PF03144 Elongation factor Tu domain 2 AMD14_RS05440 PF03143 Elongation factor Tu C-terminal domain AMD14_RS05445 PF00338 Ribosomal protein S10p/S20e AMD14_RS05450 PF00297 Ribosomal protein L3 AMD14_RS05455 PF00573 Ribosomal protein L4/L1 family AMD14_RS05460 PF00276 Ribosomal protein L23 AMD14_RS05465 PF00181 Ribosomal Proteins L2, RNA binding domain AMD14_RS05465 PF03947 Ribosomal Proteins L2, C-terminal domain AMD14_RS05470 PF00203 Ribosomal protein S19 AMD14_RS05475 PF00237 Ribosomal protein L22p/L17e AMD14_RS05480 PF07650 KH domain AMD14_RS05480 PF00189 Ribosomal protein S3, C-terminal domain AMD14_RS05485 PF00252 Ribosomal protein L16p/L10e AMD14_RS05490 PF00831 Ribosomal L29 protein AMD14_RS05495 PF00366 Ribosomal protein S17 AMD14_RS05500 PF00238 Ribosomal protein L14p/L23e AMD14_RS05505 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMD14_RS05505 PF00467 KOW motif AMD14_RS05510 PF00673 ribosomal L5P family C-terminus AMD14_RS05510 PF00281 Ribosomal protein L5 AMD14_RS05515 PF00253 Ribosomal protein S14p/S29e AMD14_RS05520 PF00410 Ribosomal protein S8 AMD14_RS05525 PF00347 Ribosomal protein L6 AMD14_RS05530 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMD14_RS05535 PF03719 Ribosomal protein S5, C-terminal domain AMD14_RS05535 PF00333 Ribosomal protein S5, N-terminal domain AMD14_RS05540 PF00327 Ribosomal protein L30p/L7e AMD14_RS05545 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMD14_RS05550 PF00344 SecY translocase AMD14_RS05555 PF00416 Ribosomal protein S13/S18 AMD14_RS05560 PF00411 Ribosomal protein S11 AMD14_RS05565 PF01479 S4 domain AMD14_RS05565 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD14_RS05570 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD14_RS05570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD14_RS05570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD14_RS05575 PF01196 Ribosomal protein L17 AMD14_RS05580 PF02600 Disulfide bond formation protein DsbB AMD14_RS05595 PF01474 Class-II DAHP synthetase family AMD14_RS05605 PF01425 Amidase AMD14_RS05615 PF00679 Elongation factor G C-terminus AMD14_RS05615 PF00009 Elongation factor Tu GTP binding domain AMD14_RS05615 PF03144 Elongation factor Tu domain 2 AMD14_RS05620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD14_RS05625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD14_RS05625 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD14_RS05630 PF02798 Glutathione S-transferase, N-terminal domain AMD14_RS05630 PF00043 Glutathione S-transferase, C-terminal domain AMD14_RS05640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS05640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD14_RS05645 PF00107 Zinc-binding dehydrogenase AMD14_RS05645 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS05655 PF05736 OprF membrane domain AMD14_RS05655 PF00691 OmpA family AMD14_RS05665 PF00849 RNA pseudouridylate synthase AMD14_RS05675 PF00155 Aminotransferase class I and II AMD14_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS05690 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS05695 PF00005 ABC transporter AMD14_RS05695 PF17850 CysA C-terminal regulatory domain AMD14_RS05695 PF12857 TOBE-like domain AMD14_RS05705 PF00107 Zinc-binding dehydrogenase AMD14_RS05705 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS05720 PF04185 Phosphoesterase family AMD14_RS05720 PF05506 Domain of unknown function (DUF756) AMD14_RS05725 PF10459 Peptidase S46 AMD14_RS05730 PF10459 Peptidase S46 AMD14_RS05735 PF00300 Histidine phosphatase superfamily (branch 1) AMD14_RS05740 PF08245 Mur ligase middle domain AMD14_RS05740 PF02875 Mur ligase family, glutamate ligase domain AMD14_RS05755 PF00156 Phosphoribosyl transferase domain AMD14_RS05760 PF04305 Protein of unknown function (DUF455) AMD14_RS05780 PF00149 Calcineurin-like phosphoesterase AMD14_RS05785 PF01569 PAP2 superfamily AMD14_RS05790 PF00534 Glycosyl transferases group 1 AMD14_RS05790 PF13439 Glycosyltransferase Family 4 AMD14_RS05795 PF02541 Ppx/GppA phosphatase family AMD14_RS05800 PF02503 Polyphosphate kinase middle domain AMD14_RS05800 PF13090 Polyphosphate kinase C-terminal domain 2 AMD14_RS05800 PF17941 Polyphosphate kinase C-terminal domain 1 AMD14_RS05800 PF13089 Polyphosphate kinase N-terminal domain AMD14_RS05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS05805 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS05805 PF00989 PAS fold AMD14_RS05805 PF11808 Phosphate regulon sensor protein PhoR AMD14_RS05810 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS05810 PF00072 Response regulator receiver domain AMD14_RS05815 PF13181 Tetratricopeptide repeat AMD14_RS05815 PF01435 Peptidase family M48 AMD14_RS05820 PF00462 Glutaredoxin AMD14_RS05830 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD14_RS05960 PF13333 Integrase core domain AMD14_RS05960 PF00665 Integrase core domain AMD14_RS05960 PF13276 HTH-like domain AMD14_RS05975 PF00989 PAS fold AMD14_RS05975 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS05985 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD14_RS05985 PF05697 Bacterial trigger factor protein (TF) AMD14_RS05990 PF00574 Clp protease AMD14_RS05995 PF10431 C-terminal, D2-small domain, of ClpB protein AMD14_RS05995 PF07724 AAA domain (Cdc48 subfamily) AMD14_RS05995 PF06689 ClpX C4-type zinc finger AMD14_RS06000 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD14_RS06000 PF00004 ATPase family associated with various cellular activities (AAA) AMD14_RS06000 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMD14_RS06005 PF00216 Bacterial DNA-binding protein AMD14_RS06030 PF01476 LysM domain AMD14_RS06030 PF05257 CHAP domain AMD14_RS06035 PF00753 Metallo-beta-lactamase superfamily AMD14_RS06035 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD14_RS06045 PF00075 RNase H AMD14_RS06050 PF00929 Exonuclease AMD14_RS06070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD14_RS06080 PF12706 Beta-lactamase superfamily domain AMD14_RS06080 PF00753 Metallo-beta-lactamase superfamily AMD14_RS06085 PF04055 Radical SAM superfamily AMD14_RS06085 PF06463 Molybdenum Cofactor Synthesis C AMD14_RS06095 PF01967 MoaC family AMD14_RS06100 PF02597 ThiS family AMD14_RS06105 PF02391 MoaE protein AMD14_RS06155 PF12169 DNA polymerase III subunits gamma and tau domain III AMD14_RS06155 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD14_RS06155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMD14_RS06160 PF02575 YbaB/EbfC DNA-binding family AMD14_RS06165 PF02132 RecR protein AMD14_RS06165 PF13662 Toprim domain AMD14_RS06170 PF01230 HIT domain AMD14_RS06180 PF11992 Domain of unknown function (DUF3488) AMD14_RS06180 PF13559 Domain of unknown function (DUF4129) AMD14_RS06180 PF01841 Transglutaminase-like superfamily AMD14_RS06190 PF17863 AAA lid domain AMD14_RS06190 PF07726 ATPase family associated with various cellular activities (AAA) AMD14_RS06210 PF02545 Maf-like protein AMD14_RS06215 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMD14_RS06220 PF01783 Ribosomal L32p protein family AMD14_RS06225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD14_RS06225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD14_RS06235 PF00698 Acyl transferase domain AMD14_RS06245 PF00550 Phosphopantetheine attachment site AMD14_RS06250 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD14_RS06250 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD14_RS06255 PF04715 Anthranilate synthase component I, N terminal region AMD14_RS06255 PF00425 chorismate binding enzyme AMD14_RS06260 PF02618 YceG-like family AMD14_RS06265 PF09115 DNA polymerase III, delta subunit, C terminal AMD14_RS06285 PF02954 Bacterial regulatory protein, Fis family AMD14_RS06285 PF06506 Propionate catabolism activator AMD14_RS06285 PF00158 Sigma-54 interaction domain AMD14_RS06295 PF00285 Citrate synthase, C-terminal domain AMD14_RS06300 PF00330 Aconitase family (aconitate hydratase) AMD14_RS06300 PF00694 Aconitase C-terminal domain AMD14_RS06305 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AMD14_RS06310 PF04303 PrpF protein AMD14_RS06315 PF00593 TonB dependent receptor AMD14_RS06315 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS06325 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AMD14_RS06325 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AMD14_RS06325 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AMD14_RS06325 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AMD14_RS06325 PF07703 Alpha-2-macroglobulin bait region domain AMD14_RS06325 PF17962 Bacterial macroglobulin domain 6 AMD14_RS06325 PF01835 MG2 domain AMD14_RS06325 PF00207 Alpha-2-macroglobulin family AMD14_RS06340 PF00905 Penicillin binding protein transpeptidase domain AMD14_RS06340 PF00912 Transglycosylase AMD14_RS06340 PF06832 Penicillin-Binding Protein C-terminus Family AMD14_RS06350 PF08534 Redoxin AMD14_RS06360 PF01556 DnaJ C terminal domain AMD14_RS06360 PF00226 DnaJ domain AMD14_RS06365 PF00072 Response regulator receiver domain AMD14_RS06370 PF12221 Bacterial membrane protein N terminal AMD14_RS06370 PF01145 SPFH domain / Band 7 family AMD14_RS06375 PF01145 SPFH domain / Band 7 family AMD14_RS06385 PF00709 Adenylosuccinate synthetase AMD14_RS06390 PF01433 Peptidase family M1 domain AMD14_RS06390 PF11838 ERAP1-like C-terminal domain AMD14_RS06405 PF00440 Bacterial regulatory proteins, tetR family AMD14_RS06475 PF13456 Reverse transcriptase-like AMD14_RS06475 PF00300 Histidine phosphatase superfamily (branch 1) AMD14_RS06480 PF01256 Carbohydrate kinase AMD14_RS06490 PF00723 Glycosyl hydrolases family 15 AMD14_RS06500 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD14_RS06500 PF07971 Glycosyl hydrolase family 92 AMD14_RS06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS06540 PF17755 UvrA DNA-binding domain AMD14_RS06545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD14_RS06545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD14_RS06550 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD14_RS06550 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD14_RS06555 PF01799 [2Fe-2S] binding domain AMD14_RS06555 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD14_RS06590 PF01726 LexA DNA binding domain AMD14_RS06590 PF00717 Peptidase S24-like AMD14_RS06605 PF02811 PHP domain AMD14_RS06605 PF14579 Helix-hairpin-helix motif AMD14_RS06605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD14_RS06605 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD14_RS06610 PF00326 Prolyl oligopeptidase family AMD14_RS06620 PF03169 OPT oligopeptide transporter protein AMD14_RS06635 PF07676 WD40-like Beta Propeller Repeat AMD14_RS06635 PF00326 Prolyl oligopeptidase family AMD14_RS06635 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD14_RS06650 PF02311 AraC-like ligand binding domain AMD14_RS06650 PF12833 Helix-turn-helix domain AMD14_RS06665 PF18011 C-terminal domain found in long catalases AMD14_RS06665 PF06628 Catalase-related immune-responsive AMD14_RS06665 PF00199 Catalase AMD14_RS06670 PF00248 Aldo/keto reductase family AMD14_RS06675 PF00135 Carboxylesterase family AMD14_RS06680 PF02347 Glycine cleavage system P-protein AMD14_RS06685 PF07690 Major Facilitator Superfamily AMD14_RS06700 PF00884 Sulfatase AMD14_RS06700 PF08019 Phosphoethanolamine transferase EptA/EptB AMD14_RS06715 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS06715 PF00072 Response regulator receiver domain AMD14_RS06720 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS06720 PF08521 Two-component sensor kinase N-terminal AMD14_RS06730 PF03776 Septum formation topological specificity factor MinE AMD14_RS06735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD14_RS06740 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD14_RS06740 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD14_RS06755 PF07730 Histidine kinase AMD14_RS06760 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS06760 PF00072 Response regulator receiver domain AMD14_RS06775 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD14_RS06800 PF02222 ATP-grasp domain AMD14_RS06810 PF04377 Arginine-tRNA-protein transferase, C terminus AMD14_RS06810 PF04376 Arginine-tRNA-protein transferase, N terminus AMD14_RS06835 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS06850 PF17760 UvrA interaction domain AMD14_RS06850 PF00005 ABC transporter AMD14_RS06850 PF17755 UvrA DNA-binding domain AMD14_RS06855 PF00829 Ribosomal prokaryotic L21 protein AMD14_RS06860 PF01016 Ribosomal L27 protein AMD14_RS06865 PF01926 50S ribosome-binding GTPase AMD14_RS06865 PF01018 GTP1/OBG AMD14_RS06870 PF01649 Ribosomal protein S20 AMD14_RS06875 PF03023 Lipid II flippase MurJ AMD14_RS06880 PF06574 FAD synthetase AMD14_RS06880 PF01687 Riboflavin kinase AMD14_RS06885 PF06827 Zinc finger found in FPG and IleRS AMD14_RS06885 PF00133 tRNA synthetases class I (I, L, M and V) AMD14_RS06885 PF08264 Anticodon-binding domain of tRNA AMD14_RS06890 PF01252 Signal peptidase (SPase) II AMD14_RS06895 PF02401 LytB protein AMD14_RS06905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD14_RS06905 PF06481 COX Aromatic Rich Motif AMD14_RS06910 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD14_RS06915 PF00510 Cytochrome c oxidase subunit III AMD14_RS06920 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMD14_RS06930 PF18073 Rubredoxin metal binding domain AMD14_RS06935 PF05656 Protein of unknown function (DUF805) AMD14_RS06945 PF12833 Helix-turn-helix domain AMD14_RS06950 PF00183 Hsp90 protein AMD14_RS06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS06960 PF01740 STAS domain AMD14_RS06960 PF08678 Rsbr N terminal AMD14_RS06965 PF01740 STAS domain AMD14_RS06970 PF13581 Histidine kinase-like ATPase domain AMD14_RS06980 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD14_RS06980 PF00672 HAMP domain AMD14_RS06980 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS06980 PF01627 Hpt domain AMD14_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS06980 PF00072 Response regulator receiver domain AMD14_RS06985 PF08448 PAS fold AMD14_RS06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS06985 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS06985 PF00072 Response regulator receiver domain AMD14_RS06985 PF13188 PAS domain AMD14_RS06990 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD14_RS06990 PF04616 Glycosyl hydrolases family 43 AMD14_RS06995 PF00593 TonB dependent receptor AMD14_RS06995 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS07000 PF00085 Thioredoxin AMD14_RS07005 PF07237 Protein of unknown function (DUF1428) AMD14_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS07010 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS07010 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD14_RS07010 PF13493 Domain of unknown function (DUF4118) AMD14_RS07010 PF13492 GAF domain AMD14_RS07015 PF01339 CheB methylesterase AMD14_RS07020 PF03705 CheR methyltransferase, all-alpha domain AMD14_RS07020 PF01739 CheR methyltransferase, SAM binding domain AMD14_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS07025 PF00672 HAMP domain AMD14_RS07025 PF01627 Hpt domain AMD14_RS07025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD14_RS07025 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS07025 PF00072 Response regulator receiver domain AMD14_RS07030 PF13426 PAS domain AMD14_RS07030 PF00072 Response regulator receiver domain AMD14_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS07035 PF00072 Response regulator receiver domain AMD14_RS07040 PF00722 Glycosyl hydrolases family 16 AMD14_RS07045 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMD14_RS07055 PF01263 Aldose 1-epimerase AMD14_RS07060 PF01578 Cytochrome C assembly protein AMD14_RS07065 PF02978 Signal peptide binding domain AMD14_RS07065 PF02881 SRP54-type protein, helical bundle domain AMD14_RS07065 PF00448 SRP54-type protein, GTPase domain AMD14_RS07070 PF03060 Nitronate monooxygenase AMD14_RS07075 PF01063 Amino-transferase class IV AMD14_RS07080 PF00886 Ribosomal protein S16 AMD14_RS07085 PF01782 RimM N-terminal domain AMD14_RS07085 PF05239 PRC-barrel domain AMD14_RS07090 PF01746 tRNA (Guanine-1)-methyltransferase AMD14_RS07095 PF01245 Ribosomal protein L19 AMD14_RS07120 PF01479 S4 domain AMD14_RS07125 PF00141 Peroxidase AMD14_RS07135 PF05190 MutS family domain IV AMD14_RS07135 PF01624 MutS domain I AMD14_RS07135 PF05188 MutS domain II AMD14_RS07135 PF05192 MutS domain III AMD14_RS07135 PF00488 MutS domain V AMD14_RS07145 PF03527 RHS protein AMD14_RS07145 PF05593 RHS Repeat AMD14_RS07165 PF16355 Domain of unknown function (DUF4982) AMD14_RS07165 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD14_RS07165 PF00703 Glycosyl hydrolases family 2 AMD14_RS07165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD14_RS07165 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD14_RS07170 PF07745 Glycosyl hydrolase family 53 AMD14_RS07180 PF06114 IrrE N-terminal-like domain AMD14_RS07180 PF01381 Helix-turn-helix AMD14_RS07180 PF09856 Predicted transcriptional regulator (DUF2083) AMD14_RS07185 PF00171 Aldehyde dehydrogenase family AMD14_RS07190 PF02770 Acyl-CoA dehydrogenase, middle domain AMD14_RS07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD14_RS07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD14_RS07195 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS07200 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS07200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD14_RS07200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD14_RS07205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD14_RS07205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD14_RS07210 PF01545 Cation efflux family AMD14_RS07215 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS07215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD14_RS07215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD14_RS07220 PF04542 Sigma-70 region 2 AMD14_RS07220 PF08281 Sigma-70, region 4 AMD14_RS07230 PF13180 PDZ domain AMD14_RS07235 PF00679 Elongation factor G C-terminus AMD14_RS07235 PF00009 Elongation factor Tu GTP binding domain AMD14_RS07235 PF03144 Elongation factor Tu domain 2 AMD14_RS07235 PF06421 GTP-binding protein LepA C-terminus AMD14_RS07240 PF10502 Signal peptidase, peptidase S26 AMD14_RS07250 PF14622 Ribonuclease-III-like AMD14_RS07250 PF00035 Double-stranded RNA binding motif AMD14_RS07255 PF07650 KH domain AMD14_RS07255 PF01926 50S ribosome-binding GTPase AMD14_RS07260 PF11967 Recombination protein O N terminal AMD14_RS07260 PF02565 Recombination protein O C terminal AMD14_RS07270 PF05958 tRNA (Uracil-5-)-methyltransferase AMD14_RS07275 PF01928 CYTH domain AMD14_RS07280 PF01323 DSBA-like thioredoxin domain AMD14_RS07285 PF01593 Flavin containing amine oxidoreductase AMD14_RS07290 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD14_RS07295 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD14_RS07300 PF00156 Phosphoribosyl transferase domain AMD14_RS07305 PF01048 Phosphorylase superfamily AMD14_RS07310 PF00313 'Cold-shock' DNA-binding domain AMD14_RS07315 PF01494 FAD binding domain AMD14_RS07325 PF00270 DEAD/DEAH box helicase AMD14_RS07325 PF08494 DEAD/H associated AMD14_RS07325 PF00271 Helicase conserved C-terminal domain AMD14_RS07330 PF04675 DNA ligase N terminus AMD14_RS07330 PF01068 ATP dependent DNA ligase domain AMD14_RS07330 PF04679 ATP dependent DNA ligase C terminal region AMD14_RS07340 PF01068 ATP dependent DNA ligase domain AMD14_RS07340 PF04679 ATP dependent DNA ligase C terminal region AMD14_RS07340 PF04675 DNA ligase N terminus AMD14_RS07355 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS07355 PF00072 Response regulator receiver domain AMD14_RS07370 PF00108 Thiolase, N-terminal domain AMD14_RS07370 PF02803 Thiolase, C-terminal domain AMD14_RS07375 PF00082 Subtilase family AMD14_RS07375 PF12951 Passenger-associated-transport-repeat AMD14_RS07375 PF03797 Autotransporter beta-domain AMD14_RS07380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD14_RS07380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD14_RS07390 PF01863 Protein of unknown function DUF45 AMD14_RS07395 PF07043 Protein of unknown function (DUF1328) AMD14_RS07405 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD14_RS07430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD14_RS07440 PF03831 PhnA domain AMD14_RS07440 PF08274 PhnA Zinc-Ribbon AMD14_RS07445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD14_RS07450 PF07690 Major Facilitator Superfamily AMD14_RS07485 PF09924 Uncharacterised conserved protein (DUF2156) AMD14_RS07485 PF03706 Lysylphosphatidylglycerol synthase TM region AMD14_RS07495 PF01042 Endoribonuclease L-PSP AMD14_RS07540 PF04545 Sigma-70, region 4 AMD14_RS07540 PF04542 Sigma-70 region 2 AMD14_RS07560 PF04060 Putative Fe-S cluster AMD14_RS07570 PF09334 tRNA synthetases class I (M) AMD14_RS07570 PF01588 Putative tRNA binding domain AMD14_RS07585 PF13732 Domain of unknown function (DUF4162) AMD14_RS07585 PF00005 ABC transporter AMD14_RS07590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD14_RS07595 PF00324 Amino acid permease AMD14_RS07600 PF02574 Homocysteine S-methyltransferase AMD14_RS07610 PF02592 Putative vitamin uptake transporter AMD14_RS07630 PF03551 Transcriptional regulator PadR-like family AMD14_RS07650 PF03653 Uncharacterised protein family (UPF0093) AMD14_RS07665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD14_RS07670 PF14579 Helix-hairpin-helix motif AMD14_RS07670 PF01336 OB-fold nucleic acid binding domain AMD14_RS07670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD14_RS07670 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD14_RS07670 PF02811 PHP domain AMD14_RS07675 PF01351 Ribonuclease HII AMD14_RS07680 PF02684 Lipid-A-disaccharide synthetase AMD14_RS07685 PF00132 Bacterial transferase hexapeptide (six repeats) AMD14_RS07685 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD14_RS07690 PF07977 FabA-like domain AMD14_RS07695 PF00132 Bacterial transferase hexapeptide (six repeats) AMD14_RS07695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD14_RS07705 PF07244 Surface antigen variable number repeat AMD14_RS07705 PF01103 Surface antigen AMD14_RS07710 PF17820 PDZ domain AMD14_RS07710 PF02163 Peptidase family M50 AMD14_RS07715 PF13288 DXP reductoisomerase C-terminal domain AMD14_RS07715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMD14_RS07715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD14_RS07725 PF01255 Putative undecaprenyl diphosphate synthase AMD14_RS07730 PF01765 Ribosome recycling factor AMD14_RS07735 PF00696 Amino acid kinase family AMD14_RS07740 PF00072 Response regulator receiver domain AMD14_RS07740 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS07745 PF00889 Elongation factor TS AMD14_RS07750 PF00318 Ribosomal protein S2 AMD14_RS07785 PF00557 Metallopeptidase family M24 AMD14_RS07790 PF01909 Nucleotidyltransferase domain AMD14_RS07790 PF01966 HD domain AMD14_RS07790 PF08335 GlnD PII-uridylyltransferase AMD14_RS07795 PF14602 Hexapeptide repeat of succinyl-transferase AMD14_RS07795 PF00132 Bacterial transferase hexapeptide (six repeats) AMD14_RS07795 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD14_RS07800 PF03960 ArsC family AMD14_RS07805 PF01546 Peptidase family M20/M25/M40 AMD14_RS07805 PF07687 Peptidase dimerisation domain AMD14_RS07810 PF00733 Asparagine synthase AMD14_RS07810 PF13537 Glutamine amidotransferase domain AMD14_RS07820 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS07820 PF00593 TonB dependent receptor AMD14_RS07835 PF00210 Ferritin-like domain AMD14_RS07840 PF05724 Thiopurine S-methyltransferase (TPMT) AMD14_RS07850 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD14_RS07850 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD14_RS07865 PF02321 Outer membrane efflux protein AMD14_RS07870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS07870 PF00529 HlyD membrane-fusion protein of T1SS AMD14_RS07875 PF07690 Major Facilitator Superfamily AMD14_RS07885 PF14310 Fibronectin type III-like domain AMD14_RS07885 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD14_RS07885 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD14_RS07895 PF00854 POT family AMD14_RS07920 PF12802 MarR family AMD14_RS07925 PF01432 Peptidase family M3 AMD14_RS07930 PF00255 Glutathione peroxidase AMD14_RS07935 PF00175 Oxidoreductase NAD-binding domain AMD14_RS07935 PF00970 Oxidoreductase FAD-binding domain AMD14_RS07940 PF00005 ABC transporter AMD14_RS07945 PF05681 Fumarate hydratase (Fumerase) AMD14_RS07945 PF05683 Fumarase C-terminus AMD14_RS07955 PF00484 Carbonic anhydrase AMD14_RS07960 PF02253 Phospholipase A1 AMD14_RS07970 PF00313 'Cold-shock' DNA-binding domain AMD14_RS07985 PF00899 ThiF family AMD14_RS07990 PF01026 TatD related DNase AMD14_RS08005 PF02770 Acyl-CoA dehydrogenase, middle domain AMD14_RS08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD14_RS08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD14_RS08015 PF00043 Glutathione S-transferase, C-terminal domain AMD14_RS08015 PF02798 Glutathione S-transferase, N-terminal domain AMD14_RS08025 PF13537 Glutamine amidotransferase domain AMD14_RS08025 PF00733 Asparagine synthase AMD14_RS08030 PF03358 NADPH-dependent FMN reductase AMD14_RS08035 PF00772 DnaB-like helicase N terminal domain AMD14_RS08035 PF03796 DnaB-like helicase C terminal domain AMD14_RS08040 PF03441 FAD binding domain of DNA photolyase AMD14_RS08040 PF00875 DNA photolyase AMD14_RS08045 PF00691 OmpA family AMD14_RS08045 PF05736 OprF membrane domain AMD14_RS08050 PF03466 LysR substrate binding domain AMD14_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS08065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS08065 PF00529 HlyD membrane-fusion protein of T1SS AMD14_RS08070 PF00873 AcrB/AcrD/AcrF family AMD14_RS08075 PF00106 short chain dehydrogenase AMD14_RS08080 PF02321 Outer membrane efflux protein AMD14_RS08085 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS08095 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS08160 PF01527 Transposase AMD14_RS08195 PF00082 Subtilase family AMD14_RS08200 PF01668 SmpB protein AMD14_RS08205 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD14_RS08210 PF03658 RnfH family Ubiquitin AMD14_RS08215 PF04355 SmpA / OmlA family AMD14_RS08220 PF01475 Ferric uptake regulator family AMD14_RS08225 PF02463 RecF/RecN/SMC N terminal domain AMD14_RS08230 PF01628 HrcA protein C terminal domain AMD14_RS08230 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD14_RS08235 PF01025 GrpE AMD14_RS08240 PF00012 Hsp70 protein AMD14_RS08245 PF01556 DnaJ C terminal domain AMD14_RS08245 PF00226 DnaJ domain AMD14_RS08245 PF00684 DnaJ central domain AMD14_RS08250 PF08543 Phosphomethylpyrimidine kinase AMD14_RS08275 PF03412 Peptidase C39 family AMD14_RS08275 PF00005 ABC transporter AMD14_RS08275 PF00664 ABC transporter transmembrane region AMD14_RS08280 PF03466 LysR substrate binding domain AMD14_RS08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS08285 PF00664 ABC transporter transmembrane region AMD14_RS08285 PF00005 ABC transporter AMD14_RS08290 PF01205 Uncharacterized protein family UPF0029 AMD14_RS08295 PF03641 Possible lysine decarboxylase AMD14_RS08300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD14_RS08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS08305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD14_RS08305 PF02817 e3 binding domain AMD14_RS08305 PF00364 Biotin-requiring enzyme AMD14_RS08310 PF16870 2-oxoglutarate dehydrogenase C-terminal AMD14_RS08310 PF16078 2-oxoglutarate dehydrogenase N-terminus AMD14_RS08310 PF00676 Dehydrogenase E1 component AMD14_RS08310 PF02779 Transketolase, pyrimidine binding domain AMD14_RS08320 PF08007 Cupin superfamily protein AMD14_RS08330 PF08328 Adenylosuccinate lyase C-terminal AMD14_RS08330 PF00206 Lyase AMD14_RS08340 PF01595 Cyclin M transmembrane N-terminal domain AMD14_RS08340 PF00571 CBS domain AMD14_RS08340 PF03471 Transporter associated domain AMD14_RS08345 PF10415 Fumarase C C-terminus AMD14_RS08345 PF00206 Lyase AMD14_RS08370 PF00005 ABC transporter AMD14_RS08375 PF00392 Bacterial regulatory proteins, gntR family AMD14_RS08380 PF00255 Glutathione peroxidase AMD14_RS08385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD14_RS08385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD14_RS08390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD14_RS08390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD14_RS08390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD14_RS08395 PF04102 SlyX AMD14_RS08410 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS08415 PF07690 Major Facilitator Superfamily AMD14_RS08420 PF00294 pfkB family carbohydrate kinase AMD14_RS08430 PF02310 B12 binding domain AMD14_RS08430 PF02607 B12 binding domain AMD14_RS08430 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD14_RS08430 PF00809 Pterin binding enzyme AMD14_RS08430 PF02574 Homocysteine S-methyltransferase AMD14_RS08435 PF02574 Homocysteine S-methyltransferase AMD14_RS08435 PF00809 Pterin binding enzyme AMD14_RS08440 PF01209 ubiE/COQ5 methyltransferase family AMD14_RS08445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD14_RS08445 PF02770 Acyl-CoA dehydrogenase, middle domain AMD14_RS08445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD14_RS08460 PF08461 Ribonuclease R winged-helix domain AMD14_RS08460 PF00773 RNB domain AMD14_RS08460 PF08206 Ribonuclease B OB domain AMD14_RS08460 PF00575 S1 RNA binding domain AMD14_RS08460 PF17876 Cold shock domain AMD14_RS08470 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD14_RS08470 PF00588 SpoU rRNA Methylase family AMD14_RS08475 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS08480 PF00929 Exonuclease AMD14_RS08490 PF01895 PhoU domain AMD14_RS08495 PF00005 ABC transporter AMD14_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS08505 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS08510 PF12849 PBP superfamily domain AMD14_RS08515 PF12849 PBP superfamily domain AMD14_RS08530 PF00484 Carbonic anhydrase AMD14_RS08535 PF01740 STAS domain AMD14_RS08535 PF00916 Sulfate permease family AMD14_RS08540 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD14_RS08540 PF00633 Helix-hairpin-helix motif AMD14_RS08540 PF10576 Iron-sulfur binding domain of endonuclease III AMD14_RS08550 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS08555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD14_RS08555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD14_RS08560 PF00293 NUDIX domain AMD14_RS08565 PF00581 Rhodanese-like domain AMD14_RS08595 PF12848 ABC transporter AMD14_RS08595 PF16326 ABC transporter C-terminal domain AMD14_RS08595 PF00005 ABC transporter AMD14_RS08600 PF02926 THUMP domain AMD14_RS08600 PF01170 Putative RNA methylase family UPF0020 AMD14_RS08600 PF10672 S-adenosylmethionine-dependent methyltransferase AMD14_RS08605 PF01513 ATP-NAD kinase AMD14_RS08630 PF08411 Exonuclease C-terminal AMD14_RS08630 PF00929 Exonuclease AMD14_RS08635 PF01494 FAD binding domain AMD14_RS08640 PF00266 Aminotransferase class-V AMD14_RS08650 PF06052 3-hydroxyanthranilic acid dioxygenase AMD14_RS08655 PF00484 Carbonic anhydrase AMD14_RS08700 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS08700 PF00072 Response regulator receiver domain AMD14_RS08715 PF04299 Putative FMN-binding domain AMD14_RS08735 PF01336 OB-fold nucleic acid binding domain AMD14_RS08735 PF00152 tRNA synthetases class II (D, K and N) AMD14_RS08740 PF01521 Iron-sulphur cluster biosynthesis AMD14_RS08745 PF01250 Ribosomal protein S6 AMD14_RS08750 PF01084 Ribosomal protein S18 AMD14_RS08755 PF03948 Ribosomal protein L9, C-terminal domain AMD14_RS08755 PF01281 Ribosomal protein L9, N-terminal domain AMD14_RS08760 PF02463 RecF/RecN/SMC N terminal domain AMD14_RS08765 PF04354 ZipA, C-terminal FtsZ-binding domain AMD14_RS08775 PF00155 Aminotransferase class I and II AMD14_RS08780 PF12826 Helix-hairpin-helix motif AMD14_RS08780 PF00533 BRCA1 C Terminus (BRCT) domain AMD14_RS08780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD14_RS08780 PF01653 NAD-dependent DNA ligase adenylation domain AMD14_RS08780 PF03120 NAD-dependent DNA ligase OB-fold domain AMD14_RS08785 PF00152 tRNA synthetases class II (D, K and N) AMD14_RS08795 PF01008 Initiation factor 2 subunit family AMD14_RS08800 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD14_RS08800 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD14_RS08805 PF13360 PQQ-like domain AMD14_RS08815 PF17391 Urocanase N-terminal domain AMD14_RS08815 PF17392 Urocanase C-terminal domain AMD14_RS08815 PF01175 Urocanase Rossmann-like domain AMD14_RS08825 PF00221 Aromatic amino acid lyase AMD14_RS08830 PF07969 Amidohydrolase family AMD14_RS08845 PF00392 Bacterial regulatory proteins, gntR family AMD14_RS08845 PF07702 UTRA domain AMD14_RS08875 PF01794 Ferric reductase like transmembrane component AMD14_RS08880 PF00174 Oxidoreductase molybdopterin binding domain AMD14_RS08885 PF00266 Aminotransferase class-V AMD14_RS08890 PF00800 Prephenate dehydratase AMD14_RS08890 PF01842 ACT domain AMD14_RS08890 PF01817 Chorismate mutase type II AMD14_RS08895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD14_RS08905 PF03544 Gram-negative bacterial TonB protein C-terminal AMD14_RS08910 PF02403 Seryl-tRNA synthetase N-terminal domain AMD14_RS08910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD14_RS08915 PF02525 Flavodoxin-like fold AMD14_RS08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS08920 PF03466 LysR substrate binding domain AMD14_RS08935 PF00672 HAMP domain AMD14_RS08935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS08935 PF02203 Tar ligand binding domain homologue AMD14_RS08940 PF01494 FAD binding domain AMD14_RS08960 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS08960 PF00072 Response regulator receiver domain AMD14_RS08960 PF13188 PAS domain AMD14_RS08960 PF08448 PAS fold AMD14_RS08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS08965 PF00672 HAMP domain AMD14_RS08965 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS08965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD14_RS08965 PF01627 Hpt domain AMD14_RS08965 PF00072 Response regulator receiver domain AMD14_RS08970 PF06745 KaiC AMD14_RS08975 PF00072 Response regulator receiver domain AMD14_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS08975 PF13426 PAS domain AMD14_RS08985 PF03918 Cytochrome C biogenesis protein AMD14_RS08990 PF08534 Redoxin AMD14_RS08995 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD14_RS08995 PF01578 Cytochrome C assembly protein AMD14_RS09000 PF03100 CcmE AMD14_RS09010 PF01578 Cytochrome C assembly protein AMD14_RS09015 PF00082 Subtilase family AMD14_RS09025 PF08281 Sigma-70, region 4 AMD14_RS09025 PF04542 Sigma-70 region 2 AMD14_RS09040 PF00034 Cytochrome c AMD14_RS09055 PF05523 WxcM-like, C-terminal AMD14_RS09075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD14_RS09080 PF01943 Polysaccharide biosynthesis protein AMD14_RS09085 PF00535 Glycosyl transferase family 2 AMD14_RS09100 PF08241 Methyltransferase domain AMD14_RS09120 PF00534 Glycosyl transferases group 1 AMD14_RS09120 PF13579 Glycosyl transferase 4-like domain AMD14_RS09135 PF00005 ABC transporter AMD14_RS09140 PF00664 ABC transporter transmembrane region AMD14_RS09140 PF00005 ABC transporter AMD14_RS09145 PF07690 Major Facilitator Superfamily AMD14_RS09150 PF00296 Luciferase-like monooxygenase AMD14_RS09165 PF01595 Cyclin M transmembrane N-terminal domain AMD14_RS09165 PF00571 CBS domain AMD14_RS09165 PF03471 Transporter associated domain AMD14_RS09175 PF01384 Phosphate transporter family AMD14_RS09190 PF00986 DNA gyrase B subunit, carboxyl terminus AMD14_RS09190 PF00204 DNA gyrase B AMD14_RS09190 PF01751 Toprim domain AMD14_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS09200 PF06418 CTP synthase N-terminus AMD14_RS09200 PF00117 Glutamine amidotransferase class-I AMD14_RS09205 PF00793 DAHP synthetase I family AMD14_RS09215 PF00113 Enolase, C-terminal TIM barrel domain AMD14_RS09215 PF03952 Enolase, N-terminal domain AMD14_RS09220 PF04977 Septum formation initiator AMD14_RS09225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD14_RS09230 PF02542 YgbB family AMD14_RS09235 PF01142 tRNA pseudouridine synthase D (TruD) AMD14_RS09240 PF01713 Smr domain AMD14_RS09245 PF01975 Survival protein SurE AMD14_RS09255 PF09335 SNARE associated Golgi protein AMD14_RS09260 PF01476 LysM domain AMD14_RS09260 PF01551 Peptidase family M23 AMD14_RS09265 PF04430 Protein of unknown function (DUF498/DUF598) AMD14_RS09270 PF01985 CRS1 / YhbY (CRM) domain AMD14_RS09275 PF01728 FtsJ-like methyltransferase AMD14_RS09280 PF06480 FtsH Extracellular AMD14_RS09280 PF00004 ATPase family associated with various cellular activities (AAA) AMD14_RS09280 PF17862 AAA+ lid domain AMD14_RS09280 PF01434 Peptidase family M41 AMD14_RS09285 PF00809 Pterin binding enzyme AMD14_RS09295 PF17209 Hfq protein AMD14_RS09300 PF13167 GTP-binding GTPase N-terminal AMD14_RS09300 PF01926 50S ribosome-binding GTPase AMD14_RS09300 PF16360 GTP-binding GTPase Middle Region AMD14_RS09305 PF02464 Competence-damaged protein AMD14_RS09310 PF03109 ABC1 family AMD14_RS09315 PF00717 Peptidase S24-like AMD14_RS09315 PF01726 LexA DNA binding domain AMD14_RS09320 PF00154 recA bacterial DNA recombination protein AMD14_RS09325 PF02631 RecX family AMD14_RS09330 PF01411 tRNA synthetases class II (A) AMD14_RS09330 PF02272 DHHA1 domain AMD14_RS09330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD14_RS09335 PF02599 Global regulator protein family AMD14_RS09345 PF13426 PAS domain AMD14_RS09345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS09345 PF08447 PAS fold AMD14_RS09350 PF17954 Quercetinase C-terminal cupin domain AMD14_RS09350 PF02678 Pirin AMD14_RS09360 PF03466 LysR substrate binding domain AMD14_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS09385 PF08543 Phosphomethylpyrimidine kinase AMD14_RS09385 PF02581 Thiamine monophosphate synthase AMD14_RS09400 PF13638 PIN domain AMD14_RS09400 PF02562 PhoH-like protein AMD14_RS09405 PF00578 AhpC/TSA family AMD14_RS09420 PF00701 Dihydrodipicolinate synthetase family AMD14_RS09430 PF00037 4Fe-4S binding domain AMD14_RS09430 PF11953 Domain of unknown function (DUF3470) AMD14_RS09435 PF05035 2-keto-3-deoxy-galactonokinase AMD14_RS09440 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD14_RS09445 PF13378 Enolase C-terminal domain-like AMD14_RS09445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD14_RS09450 PF01081 KDPG and KHG aldolase AMD14_RS09460 PF03466 LysR substrate binding domain AMD14_RS09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS09475 PF00942 Cellulose binding domain AMD14_RS09475 PF03442 Carbohydrate binding domain X2 AMD14_RS09490 PF17137 Domain of unknown function (DUF5110) AMD14_RS09490 PF01055 Glycosyl hydrolases family 31 AMD14_RS09490 PF16338 Domain of unknown function (DUF4968) AMD14_RS09500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD14_RS09500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD14_RS09510 PF00083 Sugar (and other) transporter AMD14_RS09520 PF01520 N-acetylmuramoyl-L-alanine amidase AMD14_RS09525 PF02649 Type I GTP cyclohydrolase folE2 AMD14_RS09535 PF01743 Poly A polymerase head domain AMD14_RS09535 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD14_RS09535 PF12626 Polymerase A arginine-rich C-terminus AMD14_RS09540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD14_RS09545 PF02548 Ketopantoate hydroxymethyltransferase AMD14_RS09550 PF02569 Pantoate-beta-alanine ligase AMD14_RS09555 PF02261 Aspartate decarboxylase AMD14_RS09560 PF00342 Phosphoglucose isomerase AMD14_RS09580 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD14_RS09580 PF14310 Fibronectin type III-like domain AMD14_RS09580 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD14_RS09585 PF00474 Sodium:solute symporter family AMD14_RS09590 PF00563 EAL domain AMD14_RS09590 PF01590 GAF domain AMD14_RS09590 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS09590 PF00360 Phytochrome region AMD14_RS09595 PF02013 Cellulose or protein binding domain AMD14_RS09595 PF00150 Cellulase (glycosyl hydrolase family 5) AMD14_RS09600 PF00072 Response regulator receiver domain AMD14_RS09610 PF04551 GcpE protein AMD14_RS09615 PF01569 PAP2 superfamily AMD14_RS09620 PF07690 Major Facilitator Superfamily AMD14_RS09625 PF01177 Asp/Glu/Hydantoin racemase AMD14_RS09630 PF00892 EamA-like transporter family AMD14_RS09635 PF01565 FAD binding domain AMD14_RS09635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD14_RS09640 PF01180 Dihydroorotate dehydrogenase AMD14_RS09655 PF00171 Aldehyde dehydrogenase family AMD14_RS09670 PF00535 Glycosyl transferase family 2 AMD14_RS09675 PF14883 Hypothetical glycosyl hydrolase family 13 AMD14_RS09675 PF01522 Polysaccharide deacetylase AMD14_RS09685 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD14_RS09685 PF08479 POTRA domain, ShlB-type AMD14_RS09685 PF17287 POTRA domain AMD14_RS09690 PF04829 Pre-toxin domain with VENN motif AMD14_RS09690 PF05594 Haemagluttinin repeat AMD14_RS09690 PF13332 Hemagglutinin repeat AMD14_RS09695 PF05594 Haemagluttinin repeat AMD14_RS09695 PF13332 Hemagglutinin repeat AMD14_RS09695 PF04829 Pre-toxin domain with VENN motif AMD14_RS09700 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain AMD14_RS09700 PF13018 Extended Signal Peptide of Type V secretion system AMD14_RS09700 PF05860 haemagglutination activity domain AMD14_RS09700 PF13332 Hemagglutinin repeat AMD14_RS09700 PF05594 Haemagluttinin repeat AMD14_RS09710 PF00742 Homoserine dehydrogenase AMD14_RS09710 PF03447 Homoserine dehydrogenase, NAD binding domain AMD14_RS09710 PF13840 ACT domain AMD14_RS09710 PF01842 ACT domain AMD14_RS09710 PF00696 Amino acid kinase family AMD14_RS09715 PF08544 GHMP kinases C terminal AMD14_RS09715 PF00288 GHMP kinases N terminal domain AMD14_RS09725 PF14821 Threonine synthase N terminus AMD14_RS09725 PF00291 Pyridoxal-phosphate dependent enzyme AMD14_RS09735 PF00027 Cyclic nucleotide-binding domain AMD14_RS09735 PF13545 Crp-like helix-turn-helix domain AMD14_RS09740 PF03129 Anticodon binding domain AMD14_RS09740 PF13393 Histidyl-tRNA synthetase AMD14_RS09750 PF01634 ATP phosphoribosyltransferase AMD14_RS09750 PF08029 HisG, C-terminal domain AMD14_RS09755 PF00815 Histidinol dehydrogenase AMD14_RS09760 PF00155 Aminotransferase class I and II AMD14_RS09765 PF00475 Imidazoleglycerol-phosphate dehydratase AMD14_RS09770 PF00117 Glutamine amidotransferase class-I AMD14_RS09775 PF00977 Histidine biosynthesis protein AMD14_RS09780 PF00977 Histidine biosynthesis protein AMD14_RS09785 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD14_RS09785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD14_RS09805 PF03079 ARD/ARD' family AMD14_RS09810 PF00596 Class II Aldolase and Adducin N-terminal domain AMD14_RS09815 PF13520 Amino acid permease AMD14_RS09820 PF13520 Amino acid permease AMD14_RS09830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD14_RS09830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD14_RS09830 PF01842 ACT domain AMD14_RS09835 PF01565 FAD binding domain AMD14_RS09835 PF02913 FAD linked oxidases, C-terminal domain AMD14_RS09855 PF09285 Elongation factor P, C-terminal AMD14_RS09855 PF01132 Elongation factor P (EF-P) OB domain AMD14_RS09855 PF08207 Elongation factor P (EF-P) KOW-like domain AMD14_RS09860 PF00106 short chain dehydrogenase AMD14_RS09865 PF00682 HMGL-like AMD14_RS09875 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS09885 PF02421 Ferrous iron transport protein B AMD14_RS09885 PF07664 Ferrous iron transport protein B C terminus AMD14_RS09885 PF07670 Nucleoside recognition AMD14_RS09900 PF00155 Aminotransferase class I and II AMD14_RS09905 PF03473 MOSC domain AMD14_RS09905 PF03475 3-alpha domain AMD14_RS09910 PF01113 Dihydrodipicolinate reductase, N-terminus AMD14_RS09910 PF05173 Dihydrodipicolinate reductase, C-terminus AMD14_RS09915 PF00117 Glutamine amidotransferase class-I AMD14_RS09915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD14_RS09925 PF02142 MGS-like domain AMD14_RS09925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD14_RS09925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD14_RS09930 PF03449 Transcription elongation factor, N-terminal AMD14_RS09930 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD14_RS09940 PF01368 DHH family AMD14_RS09940 PF02272 DHHA1 domain AMD14_RS09940 PF17768 RecJ OB domain AMD14_RS09985 PF00072 Response regulator receiver domain AMD14_RS09985 PF04397 LytTr DNA-binding domain AMD14_RS09990 PF03462 PCRF domain AMD14_RS09990 PF00472 RF-1 domain AMD14_RS09995 PF00152 tRNA synthetases class II (D, K and N) AMD14_RS09995 PF01336 OB-fold nucleic acid binding domain AMD14_RS10000 PF00072 Response regulator receiver domain AMD14_RS10005 PF01627 Hpt domain AMD14_RS10005 PF00072 Response regulator receiver domain AMD14_RS10005 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS10005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS10010 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS10015 PF00501 AMP-binding enzyme AMD14_RS10015 PF13193 AMP-binding enzyme C-terminal domain AMD14_RS10025 PF00694 Aconitase C-terminal domain AMD14_RS10025 PF00330 Aconitase family (aconitate hydratase) AMD14_RS10040 PF11791 Aconitate B N-terminal domain AMD14_RS10040 PF06434 Aconitate hydratase 2 N-terminus AMD14_RS10040 PF00330 Aconitase family (aconitate hydratase) AMD14_RS10045 PF00561 alpha/beta hydrolase fold AMD14_RS10050 PF03707 Bacterial signalling protein N terminal repeat AMD14_RS10050 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS10050 PF00563 EAL domain AMD14_RS10055 PF00072 Response regulator receiver domain AMD14_RS10055 PF01339 CheB methylesterase AMD14_RS10060 PF03975 CheD chemotactic sensory transduction AMD14_RS10065 PF03705 CheR methyltransferase, all-alpha domain AMD14_RS10065 PF01739 CheR methyltransferase, SAM binding domain AMD14_RS10070 PF02203 Tar ligand binding domain homologue AMD14_RS10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10070 PF00672 HAMP domain AMD14_RS10075 PF00672 HAMP domain AMD14_RS10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10075 PF02203 Tar ligand binding domain homologue AMD14_RS10080 PF00672 HAMP domain AMD14_RS10080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10080 PF02203 Tar ligand binding domain homologue AMD14_RS10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10090 PF00672 HAMP domain AMD14_RS10090 PF02203 Tar ligand binding domain homologue AMD14_RS10095 PF02203 Tar ligand binding domain homologue AMD14_RS10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10095 PF00672 HAMP domain AMD14_RS10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10100 PF00672 HAMP domain AMD14_RS10105 PF02203 Tar ligand binding domain homologue AMD14_RS10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10105 PF00672 HAMP domain AMD14_RS10120 PF02203 Tar ligand binding domain homologue AMD14_RS10120 PF00672 HAMP domain AMD14_RS10120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10125 PF08269 Cache domain AMD14_RS10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10135 PF00672 HAMP domain AMD14_RS10135 PF02203 Tar ligand binding domain homologue AMD14_RS10140 PF01627 Hpt domain AMD14_RS10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS10140 PF02895 Signal transducing histidine kinase, homodimeric domain AMD14_RS10140 PF09078 CheY binding AMD14_RS10140 PF01584 CheW-like domain AMD14_RS10145 PF00072 Response regulator receiver domain AMD14_RS10155 PF01584 CheW-like domain AMD14_RS10160 PF13614 AAA domain AMD14_RS10165 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD14_RS10165 PF00691 OmpA family AMD14_RS10170 PF01618 MotA/TolQ/ExbB proton channel family AMD14_RS10185 PF03793 PASTA domain AMD14_RS10185 PF00069 Protein kinase domain AMD14_RS10255 PF04055 Radical SAM superfamily AMD14_RS10255 PF13186 Iron-sulfur cluster-binding domain AMD14_RS10270 PF01584 CheW-like domain AMD14_RS10270 PF00072 Response regulator receiver domain AMD14_RS10270 PF02895 Signal transducing histidine kinase, homodimeric domain AMD14_RS10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS10270 PF01627 Hpt domain AMD14_RS10275 PF04344 Chemotaxis phosphatase, CheZ AMD14_RS10280 PF00072 Response regulator receiver domain AMD14_RS10285 PF04542 Sigma-70 region 2 AMD14_RS10285 PF04545 Sigma-70, region 4 AMD14_RS10285 PF04539 Sigma-70 region 3 AMD14_RS10290 PF10609 NUBPL iron-transfer P-loop NTPase AMD14_RS10295 PF00448 SRP54-type protein, GTPase domain AMD14_RS10300 PF00771 FHIPEP family AMD14_RS10305 PF01312 FlhB HrpN YscU SpaS Family AMD14_RS10310 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS10310 PF03707 Bacterial signalling protein N terminal repeat AMD14_RS10310 PF00563 EAL domain AMD14_RS10315 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS10325 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS10330 PF01311 Bacterial export proteins, family 1 AMD14_RS10335 PF01313 Bacterial export proteins, family 3 AMD14_RS10340 PF00813 FliP family AMD14_RS10345 PF04347 Flagellar biosynthesis protein, FliO AMD14_RS10350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD14_RS10355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD14_RS10355 PF02154 Flagellar motor switch protein FliM AMD14_RS10375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD14_RS10375 PF18269 T3SS EscN ATPase C-terminal domain AMD14_RS10385 PF01706 FliG C-terminal domain AMD14_RS10385 PF14841 FliG middle domain AMD14_RS10385 PF14842 FliG N-terminal domain AMD14_RS10390 PF01514 Secretory protein of YscJ/FliF family AMD14_RS10390 PF08345 Flagellar M-ring protein C-terminal AMD14_RS10395 PF02049 Flagellar hook-basal body complex protein FliE AMD14_RS10400 PF00534 Glycosyl transferases group 1 AMD14_RS10400 PF00535 Glycosyl transferase family 2 AMD14_RS10435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD14_RS10435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD14_RS10445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD14_RS10450 PF06490 Flagellar regulatory protein FleQ AMD14_RS10450 PF02954 Bacterial regulatory protein, Fis family AMD14_RS10450 PF00158 Sigma-54 interaction domain AMD14_RS10455 PF01339 CheB methylesterase AMD14_RS10455 PF00072 Response regulator receiver domain AMD14_RS10460 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD14_RS10460 PF04552 Sigma-54, DNA binding domain AMD14_RS10460 PF04963 Sigma-54 factor, core binding domain AMD14_RS10465 PF00072 Response regulator receiver domain AMD14_RS10465 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS10480 PF02561 Flagellar protein FliS AMD14_RS10485 PF07195 Flagellar hook-associated protein 2 C-terminus AMD14_RS10485 PF02465 Flagellar hook-associated protein 2 N-terminus AMD14_RS10485 PF07196 Flagellin hook IN motif AMD14_RS10490 PF00669 Bacterial flagellin N-terminal helical region AMD14_RS10490 PF00700 Bacterial flagellin C-terminal helical region AMD14_RS10495 PF00669 Bacterial flagellin N-terminal helical region AMD14_RS10495 PF00700 Bacterial flagellin C-terminal helical region AMD14_RS10500 PF07196 Flagellin hook IN motif AMD14_RS10500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD14_RS10505 PF10135 Rod binding protein AMD14_RS10505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD14_RS10510 PF02119 Flagellar P-ring protein AMD14_RS10515 PF02107 Flagellar L-ring protein AMD14_RS10520 PF00460 Flagella basal body rod protein AMD14_RS10520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD14_RS10525 PF00460 Flagella basal body rod protein AMD14_RS10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD14_RS10530 PF00460 Flagella basal body rod protein AMD14_RS10530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD14_RS10530 PF07559 Flagellar basal body protein FlaE AMD14_RS10535 PF03963 Flagellar hook capping protein - N-terminal region AMD14_RS10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD14_RS10540 PF00460 Flagella basal body rod protein AMD14_RS10550 PF00072 Response regulator receiver domain AMD14_RS10550 PF01584 CheW-like domain AMD14_RS10570 PF00989 PAS fold AMD14_RS10570 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS10570 PF13188 PAS domain AMD14_RS10570 PF13426 PAS domain AMD14_RS10575 PF00563 EAL domain AMD14_RS10575 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS10575 PF03707 Bacterial signalling protein N terminal repeat AMD14_RS10580 PF07730 Histidine kinase AMD14_RS10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS10585 PF00563 EAL domain AMD14_RS10585 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS10585 PF03707 Bacterial signalling protein N terminal repeat AMD14_RS10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS10595 PF00672 HAMP domain AMD14_RS10595 PF12729 Four helix bundle sensory module for signal transduction AMD14_RS10600 PF04356 Protein of unknown function (DUF489) AMD14_RS10610 PF00293 NUDIX domain AMD14_RS10615 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD14_RS10620 PF00004 ATPase family associated with various cellular activities (AAA) AMD14_RS10620 PF17871 AAA lid domain AMD14_RS10620 PF02861 Clp amino terminal domain, pathogenicity island component AMD14_RS10620 PF07724 AAA domain (Cdc48 subfamily) AMD14_RS10620 PF10431 C-terminal, D2-small domain, of ClpB protein AMD14_RS10625 PF01176 Translation initiation factor 1A / IF-1 AMD14_RS10630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD14_RS10640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS10645 PF17854 FtsK alpha domain AMD14_RS10645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMD14_RS10645 PF09397 Ftsk gamma domain AMD14_RS10645 PF01580 FtsK/SpoIIIE family AMD14_RS10655 PF03548 Outer membrane lipoprotein carrier protein LolA AMD14_RS10665 PF12002 MgsA AAA+ ATPase C terminal AMD14_RS10665 PF16193 AAA C-terminal domain AMD14_RS10665 PF00004 ATPase family associated with various cellular activities (AAA) AMD14_RS10670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMD14_RS10680 PF02803 Thiolase, C-terminal domain AMD14_RS10680 PF00108 Thiolase, N-terminal domain AMD14_RS10685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD14_RS10685 PF00378 Enoyl-CoA hydratase/isomerase AMD14_RS10685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD14_RS10695 PF00334 Nucleoside diphosphate kinase AMD14_RS10700 PF04055 Radical SAM superfamily AMD14_RS10710 PF13464 Domain of unknown function (DUF4115) AMD14_RS10720 PF13360 PQQ-like domain AMD14_RS10720 PF01011 PQQ enzyme repeat AMD14_RS10725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD14_RS10725 PF01926 50S ribosome-binding GTPase AMD14_RS10730 PF03454 MoeA C-terminal region (domain IV) AMD14_RS10730 PF00994 Probable molybdopterin binding domain AMD14_RS10730 PF03453 MoeA N-terminal region (domain I and II) AMD14_RS10735 PF00899 ThiF family AMD14_RS10760 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS10760 PF00107 Zinc-binding dehydrogenase AMD14_RS10760 PF13823 Alcohol dehydrogenase GroES-associated AMD14_RS10770 PF03372 Endonuclease/Exonuclease/phosphatase family AMD14_RS10780 PF03454 MoeA C-terminal region (domain IV) AMD14_RS10780 PF03453 MoeA N-terminal region (domain I and II) AMD14_RS10780 PF00994 Probable molybdopterin binding domain AMD14_RS10785 PF12804 MobA-like NTP transferase domain AMD14_RS10795 PF00561 alpha/beta hydrolase fold AMD14_RS10800 PF01566 Natural resistance-associated macrophage protein AMD14_RS10805 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD14_RS10805 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD14_RS10810 PF14437 MafB19-like deaminase AMD14_RS10815 PF00929 Exonuclease AMD14_RS10820 PF00924 Mechanosensitive ion channel AMD14_RS10820 PF05552 Conserved TM helix AMD14_RS10825 PF02896 PEP-utilising enzyme, TIM barrel domain AMD14_RS10825 PF00391 PEP-utilising enzyme, mobile domain AMD14_RS10825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD14_RS10830 PF03618 Kinase/pyrophosphorylase AMD14_RS10850 PF01066 CDP-alcohol phosphatidyltransferase AMD14_RS10860 PF00561 alpha/beta hydrolase fold AMD14_RS10875 PF01266 FAD dependent oxidoreductase AMD14_RS10875 PF00355 Rieske [2Fe-2S] domain AMD14_RS10885 PF16921 Tex protein YqgF-like domain AMD14_RS10885 PF17674 HHH domain AMD14_RS10885 PF00575 S1 RNA binding domain AMD14_RS10885 PF09371 Tex-like protein N-terminal domain AMD14_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS10890 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS10890 PF09308 LuxQ, periplasmic AMD14_RS10890 PF00072 Response regulator receiver domain AMD14_RS10930 PF00034 Cytochrome c AMD14_RS10940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS10945 PF00873 AcrB/AcrD/AcrF family AMD14_RS10950 PF00873 AcrB/AcrD/AcrF family AMD14_RS10955 PF01081 KDPG and KHG aldolase AMD14_RS10960 PF00920 Dehydratase family AMD14_RS10965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD14_RS10970 PF02685 Glucokinase AMD14_RS10975 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD14_RS10975 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD14_RS10980 PF00005 ABC transporter AMD14_RS10980 PF17912 MalK OB fold domain AMD14_RS10990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD14_RS10995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD14_RS11000 PF02910 Fumarate reductase flavoprotein C-term AMD14_RS11000 PF00890 FAD binding domain AMD14_RS11010 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD14_RS11015 PF03937 Flavinator of succinate dehydrogenase AMD14_RS11025 PF02687 FtsX-like permease family AMD14_RS11025 PF12704 MacB-like periplasmic core domain AMD14_RS11030 PF00005 ABC transporter AMD14_RS11040 PF03772 Competence protein AMD14_RS11040 PF00753 Metallo-beta-lactamase superfamily AMD14_RS11045 PF01618 MotA/TolQ/ExbB proton channel family AMD14_RS11055 PF00005 ABC transporter AMD14_RS11055 PF00664 ABC transporter transmembrane region AMD14_RS11060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD14_RS11065 PF02348 Cytidylyltransferase AMD14_RS11070 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD14_RS11080 PF08459 UvrC Helix-hairpin-helix N-terminal AMD14_RS11080 PF01541 GIY-YIG catalytic domain AMD14_RS11080 PF02151 UvrB/uvrC motif AMD14_RS11085 PF01066 CDP-alcohol phosphatidyltransferase AMD14_RS11105 PF00501 AMP-binding enzyme AMD14_RS11105 PF00668 Condensation domain AMD14_RS11105 PF13193 AMP-binding enzyme C-terminal domain AMD14_RS11105 PF00550 Phosphopantetheine attachment site AMD14_RS11110 PF00501 AMP-binding enzyme AMD14_RS11110 PF13193 AMP-binding enzyme C-terminal domain AMD14_RS11110 PF00975 Thioesterase domain AMD14_RS11110 PF00668 Condensation domain AMD14_RS11110 PF00550 Phosphopantetheine attachment site AMD14_RS11120 PF01527 Transposase AMD14_RS11125 PF13333 Integrase core domain AMD14_RS11125 PF13276 HTH-like domain AMD14_RS11125 PF00665 Integrase core domain AMD14_RS11135 PF00589 Phage integrase family AMD14_RS11145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD14_RS11145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD14_RS11145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD14_RS11155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD14_RS11165 PF00581 Rhodanese-like domain AMD14_RS11165 PF17773 UPF0176 acylphosphatase like domain AMD14_RS11170 PF00072 Response regulator receiver domain AMD14_RS11170 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS11175 PF10150 Ribonuclease E/G family AMD14_RS11175 PF12111 Polyribonucleotide phosphorylase C terminal AMD14_RS11175 PF00575 S1 RNA binding domain AMD14_RS11180 PF00849 RNA pseudouridylate synthase AMD14_RS11180 PF01479 S4 domain AMD14_RS11185 PF11737 Protein of unknown function (DUF3300) AMD14_RS11190 PF02535 ZIP Zinc transporter AMD14_RS11200 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD14_RS11205 PF01106 NifU-like domain AMD14_RS11250 PF08241 Methyltransferase domain AMD14_RS11250 PF12697 Alpha/beta hydrolase family AMD14_RS11260 PF00106 short chain dehydrogenase AMD14_RS11285 PF01494 FAD binding domain AMD14_RS11290 PF09335 SNARE associated Golgi protein AMD14_RS11300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD14_RS11310 PF07995 Glucose / Sorbosone dehydrogenase AMD14_RS11320 PF00144 Beta-lactamase AMD14_RS11325 PF00072 Response regulator receiver domain AMD14_RS11325 PF04397 LytTr DNA-binding domain AMD14_RS11330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS11330 PF07694 5TMR of 5TMR-LYT AMD14_RS11330 PF06580 Histidine kinase AMD14_RS11345 PF00082 Subtilase family AMD14_RS11345 PF03797 Autotransporter beta-domain AMD14_RS11350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS11355 PF00873 AcrB/AcrD/AcrF family AMD14_RS11365 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS11365 PF08448 PAS fold AMD14_RS11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS11365 PF13426 PAS domain AMD14_RS11365 PF00072 Response regulator receiver domain AMD14_RS11370 PF00072 Response regulator receiver domain AMD14_RS11370 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS11375 PF12951 Passenger-associated-transport-repeat AMD14_RS11375 PF12951 Passenger-associated-transport-repeat AMD14_RS11380 PF08448 PAS fold AMD14_RS11380 PF08447 PAS fold AMD14_RS11380 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS11380 PF00563 EAL domain AMD14_RS11395 PF05974 Domain of unknown function (DUF892) AMD14_RS11410 PF10414 Sirohaem synthase dimerisation region AMD14_RS11410 PF14824 Sirohaem biosynthesis protein central AMD14_RS11410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD14_RS11425 PF05977 Transmembrane secretion effector AMD14_RS11435 PF07969 Amidohydrolase family AMD14_RS11445 PF00857 Isochorismatase family AMD14_RS11460 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS11460 PF00072 Response regulator receiver domain AMD14_RS11480 PF03466 LysR substrate binding domain AMD14_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS11485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD14_RS11485 PF00361 Proton-conducting membrane transporter AMD14_RS11485 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AMD14_RS11490 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AMD14_RS11505 PF01381 Helix-turn-helix AMD14_RS11510 PF05284 Protein of unknown function (DUF736) AMD14_RS11515 PF04002 RadC-like JAB domain AMD14_RS11540 PF00589 Phage integrase family AMD14_RS11540 PF13356 Arm DNA-binding domain AMD14_RS11555 PF00593 TonB dependent receptor AMD14_RS11555 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS11570 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMD14_RS11595 PF00593 TonB dependent receptor AMD14_RS11595 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS11605 PF10947 Protein of unknown function (DUF2628) AMD14_RS11615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AMD14_RS11615 PF00722 Glycosyl hydrolases family 16 AMD14_RS11635 PF03412 Peptidase C39 family AMD14_RS11635 PF00005 ABC transporter AMD14_RS11635 PF00664 ABC transporter transmembrane region AMD14_RS11645 PF13614 AAA domain AMD14_RS11685 PF01131 DNA topoisomerase AMD14_RS11685 PF01751 Toprim domain AMD14_RS11690 PF00145 C-5 cytosine-specific DNA methylase AMD14_RS11740 PF17761 DUF1016 N-terminal domain AMD14_RS11740 PF06250 YhcG PDDEXK nuclease domain AMD14_RS11760 PF00892 EamA-like transporter family AMD14_RS11765 PF00892 EamA-like transporter family AMD14_RS11775 PF02525 Flavodoxin-like fold AMD14_RS11780 PF00043 Glutathione S-transferase, C-terminal domain AMD14_RS11780 PF02798 Glutathione S-transferase, N-terminal domain AMD14_RS11785 PF05544 Proline racemase AMD14_RS11790 PF03358 NADPH-dependent FMN reductase AMD14_RS11800 PF07690 Major Facilitator Superfamily AMD14_RS11805 PF02311 AraC-like ligand binding domain AMD14_RS11805 PF12833 Helix-turn-helix domain AMD14_RS11955 PF00580 UvrD/REP helicase N-terminal domain AMD14_RS11955 PF12462 DNA helicase IV / RNA helicase N terminal AMD14_RS11955 PF13361 UvrD-like helicase C-terminal domain AMD14_RS12030 PF03466 LysR substrate binding domain AMD14_RS12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS12035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD14_RS12035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD14_RS12040 PF03401 Tripartite tricarboxylate transporter family receptor AMD14_RS12055 PF04002 RadC-like JAB domain AMD14_RS12090 PF13356 Arm DNA-binding domain AMD14_RS12090 PF00589 Phage integrase family AMD14_RS12095 PF00117 Glutamine amidotransferase class-I AMD14_RS12095 PF02540 NAD synthase AMD14_RS12095 PF00958 GMP synthase C terminal domain AMD14_RS12100 PF00478 IMP dehydrogenase / GMP reductase domain AMD14_RS12100 PF00571 CBS domain AMD14_RS12105 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD14_RS12105 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD14_RS12115 PF00999 Sodium/hydrogen exchanger family AMD14_RS12115 PF02254 TrkA-N domain AMD14_RS12120 PF00483 Nucleotidyl transferase AMD14_RS12125 PF02719 Polysaccharide biosynthesis protein AMD14_RS12130 PF00953 Glycosyl transferase family 4 AMD14_RS12135 PF18073 Rubredoxin metal binding domain AMD14_RS12145 PF00216 Bacterial DNA-binding protein AMD14_RS12150 PF00575 S1 RNA binding domain AMD14_RS12155 PF02224 Cytidylate kinase AMD14_RS12160 PF00444 Ribosomal protein L36 AMD14_RS12170 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD14_RS12175 PF00795 Carbon-nitrogen hydrolase AMD14_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS12205 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS12225 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS12235 PF03795 YCII-related domain AMD14_RS12240 PF02616 Segregation and condensation protein ScpA AMD14_RS12245 PF04079 Segregation and condensation complex subunit ScpB AMD14_RS12250 PF00849 RNA pseudouridylate synthase AMD14_RS12250 PF01479 S4 domain AMD14_RS12265 PF00795 Carbon-nitrogen hydrolase AMD14_RS12270 PF00155 Aminotransferase class I and II AMD14_RS12275 PF00005 ABC transporter AMD14_RS12280 PF03379 CcmB protein AMD14_RS12285 PF01578 Cytochrome C assembly protein AMD14_RS12295 PF03100 CcmE AMD14_RS12300 PF01578 Cytochrome C assembly protein AMD14_RS12300 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD14_RS12305 PF08534 Redoxin AMD14_RS12310 PF03918 Cytochrome C biogenesis protein AMD14_RS12320 PF00561 alpha/beta hydrolase fold AMD14_RS12325 PF00313 'Cold-shock' DNA-binding domain AMD14_RS12330 PF00664 ABC transporter transmembrane region AMD14_RS12330 PF00005 ABC transporter AMD14_RS12335 PF00005 ABC transporter AMD14_RS12335 PF00664 ABC transporter transmembrane region AMD14_RS12340 PF01654 Cytochrome bd terminal oxidase subunit I AMD14_RS12345 PF02322 Cytochrome bd terminal oxidase subunit II AMD14_RS12365 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD14_RS12365 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD14_RS12370 PF00171 Aldehyde dehydrogenase family AMD14_RS12375 PF00696 Amino acid kinase family AMD14_RS12375 PF01472 PUA domain AMD14_RS12385 PF00206 Lyase AMD14_RS12390 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD14_RS12400 PF00696 Amino acid kinase family AMD14_RS12400 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AMD14_RS12405 PF07687 Peptidase dimerisation domain AMD14_RS12405 PF01546 Peptidase family M20/M25/M40 AMD14_RS12415 PF00764 Arginosuccinate synthase AMD14_RS12420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD14_RS12420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD14_RS12430 PF01406 tRNA synthetases class I (C) catalytic domain AMD14_RS12430 PF09190 DALR domain AMD14_RS12435 PF02657 Fe-S metabolism associated domain AMD14_RS12445 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD14_RS12455 PF01809 Putative membrane protein insertion efficiency factor AMD14_RS12460 PF01979 Amidohydrolase family AMD14_RS12465 PF01551 Peptidase family M23 AMD14_RS12465 PF08460 Bacterial SH3 domain AMD14_RS12480 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD14_RS12485 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD14_RS12495 PF00753 Metallo-beta-lactamase superfamily AMD14_RS12515 PF01527 Transposase AMD14_RS12520 PF00295 Glycosyl hydrolases family 28 AMD14_RS12530 PF13419 Haloacid dehalogenase-like hydrolase AMD14_RS12540 PF01979 Amidohydrolase family AMD14_RS12550 PF09285 Elongation factor P, C-terminal AMD14_RS12550 PF08207 Elongation factor P (EF-P) KOW-like domain AMD14_RS12550 PF01132 Elongation factor P (EF-P) OB domain AMD14_RS12555 PF04055 Radical SAM superfamily AMD14_RS12560 PF00563 EAL domain AMD14_RS12560 PF03707 Bacterial signalling protein N terminal repeat AMD14_RS12560 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS12560 PF13188 PAS domain AMD14_RS12570 PF00588 SpoU rRNA Methylase family AMD14_RS12575 PF00459 Inositol monophosphatase family AMD14_RS12580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD14_RS12580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD14_RS12585 PF00545 ribonuclease AMD14_RS12595 PF12848 ABC transporter AMD14_RS12595 PF16326 ABC transporter C-terminal domain AMD14_RS12595 PF00005 ABC transporter AMD14_RS12600 PF03880 DbpA RNA binding domain AMD14_RS12600 PF00271 Helicase conserved C-terminal domain AMD14_RS12600 PF00270 DEAD/DEAH box helicase AMD14_RS12605 PF00156 Phosphoribosyl transferase domain AMD14_RS12610 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMD14_RS12615 PF00135 Carboxylesterase family AMD14_RS12620 PF14497 Glutathione S-transferase, C-terminal domain AMD14_RS12620 PF02798 Glutathione S-transferase, N-terminal domain AMD14_RS12625 PF00313 'Cold-shock' DNA-binding domain AMD14_RS12630 PF07152 YaeQ protein AMD14_RS12640 PF00072 Response regulator receiver domain AMD14_RS12640 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS12640 PF00563 EAL domain AMD14_RS12645 PF01435 Peptidase family M48 AMD14_RS12650 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD14_RS12655 PF00106 short chain dehydrogenase AMD14_RS12660 PF07879 PHB/PHA accumulation regulator DNA-binding domain AMD14_RS12660 PF05233 PHB accumulation regulatory domain AMD14_RS12675 PF01119 DNA mismatch repair protein, C-terminal domain AMD14_RS12675 PF08676 MutL C terminal dimerisation domain AMD14_RS12680 PF01520 N-acetylmuramoyl-L-alanine amidase AMD14_RS12680 PF11741 AMIN domain AMD14_RS12685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMD14_RS12690 PF01256 Carbohydrate kinase AMD14_RS12690 PF03853 YjeF-related protein N-terminus AMD14_RS12695 PF08331 Domain of unknown function (DUF1730) AMD14_RS12700 PF13742 OB-fold nucleic acid binding domain AMD14_RS12700 PF02601 Exonuclease VII, large subunit AMD14_RS12710 PF03781 Sulfatase-modifying factor enzyme 1 AMD14_RS12715 PF00570 HRDC domain AMD14_RS12715 PF01612 3'-5' exonuclease AMD14_RS12720 PF01068 ATP dependent DNA ligase domain AMD14_RS12720 PF13298 DNA polymerase Ligase (LigD) AMD14_RS12720 PF04679 ATP dependent DNA ligase C terminal region AMD14_RS12740 PF00589 Phage integrase family AMD14_RS12765 PF05598 Transposase domain (DUF772) AMD14_RS12775 PF01527 Transposase AMD14_RS12795 PF01619 Proline dehydrogenase AMD14_RS12795 PF00171 Aldehyde dehydrogenase family AMD14_RS12795 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD14_RS12795 PF14850 DNA-binding domain of Proline dehydrogenase AMD14_RS12805 PF01527 Transposase AMD14_RS12810 PF13333 Integrase core domain AMD14_RS12810 PF13276 HTH-like domain AMD14_RS12810 PF00665 Integrase core domain AMD14_RS12815 PF02796 Helix-turn-helix domain of resolvase AMD14_RS12815 PF00239 Resolvase, N terminal domain AMD14_RS12830 PF02384 N-6 DNA Methylase AMD14_RS12835 PF09572 XamI restriction endonuclease AMD14_RS12890 PF01584 CheW-like domain AMD14_RS12895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS12895 PF00672 HAMP domain AMD14_RS12895 PF02743 Cache domain AMD14_RS12900 PF02245 Methylpurine-DNA glycosylase (MPG) AMD14_RS12905 PF08494 DEAD/H associated AMD14_RS12905 PF00271 Helicase conserved C-terminal domain AMD14_RS12905 PF00270 DEAD/DEAH box helicase AMD14_RS12920 PF04386 Stringent starvation protein B AMD14_RS12925 PF02798 Glutathione S-transferase, N-terminal domain AMD14_RS12925 PF00043 Glutathione S-transferase, C-terminal domain AMD14_RS12930 PF02167 Cytochrome C1 family AMD14_RS12935 PF00033 Cytochrome b/b6/petB AMD14_RS12935 PF00032 Cytochrome b(C-terminal)/b6/petD AMD14_RS12940 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD14_RS12940 PF00355 Rieske [2Fe-2S] domain AMD14_RS12945 PF01464 Transglycosylase SLT domain AMD14_RS12960 PF00919 Uncharacterized protein family UPF0004 AMD14_RS12960 PF01938 TRAM domain AMD14_RS12960 PF04055 Radical SAM superfamily AMD14_RS12965 PF02562 PhoH-like protein AMD14_RS12975 PF02130 Uncharacterized protein family UPF0054 AMD14_RS12985 PF00571 CBS domain AMD14_RS12985 PF03471 Transporter associated domain AMD14_RS13000 PF00171 Aldehyde dehydrogenase family AMD14_RS13010 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS13015 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS13020 PF00005 ABC transporter AMD14_RS13020 PF08402 TOBE domain AMD14_RS13025 PF02321 Outer membrane efflux protein AMD14_RS13030 PF07690 Major Facilitator Superfamily AMD14_RS13035 PF13533 Biotin-lipoyl like AMD14_RS13040 PF13416 Bacterial extracellular solute-binding protein AMD14_RS13045 PF00202 Aminotransferase class-III AMD14_RS13050 PF00120 Glutamine synthetase, catalytic domain AMD14_RS13055 PF07722 Peptidase C26 AMD14_RS13060 PF00120 Glutamine synthetase, catalytic domain AMD14_RS13065 PF01266 FAD dependent oxidoreductase AMD14_RS13070 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS13070 PF00072 Response regulator receiver domain AMD14_RS13075 PF01814 Hemerythrin HHE cation binding domain AMD14_RS13080 PF07690 Major Facilitator Superfamily AMD14_RS13080 PF00083 Sugar (and other) transporter AMD14_RS13090 PF00384 Molybdopterin oxidoreductase AMD14_RS13095 PF02634 FdhD/NarQ family AMD14_RS13100 PF07690 Major Facilitator Superfamily AMD14_RS13110 PF00202 Aminotransferase class-III AMD14_RS13120 PF04286 Protein of unknown function (DUF445) AMD14_RS13125 PF00672 HAMP domain AMD14_RS13125 PF01627 Hpt domain AMD14_RS13125 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS13125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD14_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS13125 PF00072 Response regulator receiver domain AMD14_RS13130 PF00072 Response regulator receiver domain AMD14_RS13135 PF07690 Major Facilitator Superfamily AMD14_RS13140 PF05088 Bacterial NAD-glutamate dehydrogenase AMD14_RS13150 PF00529 HlyD membrane-fusion protein of T1SS AMD14_RS13150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS13155 PF00873 AcrB/AcrD/AcrF family AMD14_RS13160 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS13165 PF05524 PEP-utilising enzyme, N-terminal AMD14_RS13165 PF00391 PEP-utilising enzyme, mobile domain AMD14_RS13165 PF02896 PEP-utilising enzyme, TIM barrel domain AMD14_RS13165 PF00381 PTS HPr component phosphorylation site AMD14_RS13165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD14_RS13170 PF00294 pfkB family carbohydrate kinase AMD14_RS13175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD14_RS13210 PF07549 SecD/SecF GG Motif AMD14_RS13210 PF02355 Protein export membrane protein AMD14_RS13215 PF13721 SecD export protein N-terminal TM region AMD14_RS13215 PF07549 SecD/SecF GG Motif AMD14_RS13215 PF02355 Protein export membrane protein AMD14_RS13220 PF02699 Preprotein translocase subunit AMD14_RS13225 PF01702 Queuine tRNA-ribosyltransferase AMD14_RS13230 PF02547 Queuosine biosynthesis protein AMD14_RS13275 PF00759 Glycosyl hydrolase family 9 AMD14_RS13275 PF02927 Cellulase N-terminal ig-like domain AMD14_RS13290 PF00037 4Fe-4S binding domain AMD14_RS13305 PF01467 Cytidylyltransferase-like AMD14_RS13315 PF00183 Hsp90 protein AMD14_RS13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS13330 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS13330 PF00593 TonB dependent receptor AMD14_RS13340 PF04616 Glycosyl hydrolases family 43 AMD14_RS13345 PF07532 Bacterial Ig-like domain (group 4) AMD14_RS13350 PF00593 TonB dependent receptor AMD14_RS13350 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS13360 PF00082 Subtilase family AMD14_RS13360 PF09286 Pro-kumamolisin, activation domain AMD14_RS13385 PF13520 Amino acid permease AMD14_RS13400 PF01321 Creatinase/Prolidase N-terminal domain AMD14_RS13400 PF00557 Metallopeptidase family M24 AMD14_RS13405 PF00171 Aldehyde dehydrogenase family AMD14_RS13410 PF00701 Dihydrodipicolinate synthetase family AMD14_RS13415 PF04324 BFD-like [2Fe-2S] binding domain AMD14_RS13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS13425 PF01266 FAD dependent oxidoreductase AMD14_RS13430 PF05544 Proline racemase AMD14_RS13440 PF00448 SRP54-type protein, GTPase domain AMD14_RS13440 PF02881 SRP54-type protein, helical bundle domain AMD14_RS13445 PF10576 Iron-sulfur binding domain of endonuclease III AMD14_RS13445 PF14815 NUDIX domain AMD14_RS13445 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD14_RS13445 PF00633 Helix-hairpin-helix motif AMD14_RS13450 PF04362 Bacterial Fe(2+) trafficking AMD14_RS13455 PF00072 Response regulator receiver domain AMD14_RS13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS13455 PF13426 PAS domain AMD14_RS13485 PF08212 Lipocalin-like domain AMD14_RS13495 PF02770 Acyl-CoA dehydrogenase, middle domain AMD14_RS13495 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMD14_RS13495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD14_RS13495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD14_RS13505 PF02779 Transketolase, pyrimidine binding domain AMD14_RS13505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD14_RS13505 PF02780 Transketolase, C-terminal domain AMD14_RS13525 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD14_RS13530 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD14_RS13530 PF00753 Metallo-beta-lactamase superfamily AMD14_RS13535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD14_RS13535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD14_RS13550 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD14_RS13565 PF14667 Polysaccharide biosynthesis C-terminal domain AMD14_RS13575 PF13439 Glycosyltransferase Family 4 AMD14_RS13575 PF00534 Glycosyl transferases group 1 AMD14_RS13595 PF02397 Bacterial sugar transferase AMD14_RS13615 PF13411 MerR HTH family regulatory protein AMD14_RS13620 PF00216 Bacterial DNA-binding protein AMD14_RS13625 PF03484 tRNA synthetase B5 domain AMD14_RS13625 PF03147 Ferredoxin-fold anticodon binding domain AMD14_RS13625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMD14_RS13625 PF03483 B3/4 domain AMD14_RS13625 PF01588 Putative tRNA binding domain AMD14_RS13630 PF01409 tRNA synthetases class II core domain (F) AMD14_RS13630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD14_RS13635 PF00453 Ribosomal protein L20 AMD14_RS13640 PF01632 Ribosomal protein L35 AMD14_RS13645 PF05198 Translation initiation factor IF-3, N-terminal domain AMD14_RS13645 PF00707 Translation initiation factor IF-3, C-terminal domain AMD14_RS13650 PF03129 Anticodon binding domain AMD14_RS13650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD14_RS13650 PF02824 TGS domain AMD14_RS13650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD14_RS13655 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS13660 PF00686 Starch binding domain AMD14_RS13660 PF00128 Alpha amylase, catalytic domain AMD14_RS13665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD14_RS13675 PF14508 Glycosyl-hydrolase 97 N-terminal AMD14_RS13675 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD14_RS13675 PF10566 Glycoside hydrolase 97 AMD14_RS13690 PF00128 Alpha amylase, catalytic domain AMD14_RS13695 PF01527 Transposase AMD14_RS13735 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AMD14_RS13750 PF01464 Transglycosylase SLT domain AMD14_RS13755 PF00437 Type II/IV secretion system protein AMD14_RS13760 PF03743 Bacterial conjugation TrbI-like protein AMD14_RS13780 PF02534 Type IV secretory system Conjugative DNA transfer AMD14_RS13795 PF17757 UvrB interaction domain AMD14_RS13795 PF02151 UvrB/uvrC motif AMD14_RS13795 PF12344 Ultra-violet resistance protein B AMD14_RS13795 PF04851 Type III restriction enzyme, res subunit AMD14_RS13795 PF00271 Helicase conserved C-terminal domain AMD14_RS13860 PF01555 DNA methylase AMD14_RS13910 PF00182 Chitinase class I AMD14_RS13975 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMD14_RS13975 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS13980 PF05567 Neisseria PilC beta-propeller domain AMD14_RS14005 PF06580 Histidine kinase AMD14_RS14005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS14005 PF07694 5TMR of 5TMR-LYT AMD14_RS14010 PF11892 Domain of unknown function (DUF3412) AMD14_RS14010 PF03641 Possible lysine decarboxylase AMD14_RS14010 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AMD14_RS14015 PF00593 TonB dependent receptor AMD14_RS14020 PF01914 MarC family integral membrane protein AMD14_RS14030 PF00462 Glutaredoxin AMD14_RS14035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD14_RS14035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD14_RS14040 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMD14_RS14040 PF02222 ATP-grasp domain AMD14_RS14045 PF00731 AIR carboxylase AMD14_RS14055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD14_RS14055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD14_RS14065 PF00013 KH domain AMD14_RS14065 PF03725 3' exoribonuclease family, domain 2 AMD14_RS14065 PF00575 S1 RNA binding domain AMD14_RS14065 PF01138 3' exoribonuclease family, domain 1 AMD14_RS14065 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD14_RS14070 PF00312 Ribosomal protein S15 AMD14_RS14075 PF09157 Pseudouridine synthase II TruB, C-terminal AMD14_RS14075 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMD14_RS14075 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD14_RS14080 PF02033 Ribosome-binding factor A AMD14_RS14085 PF00009 Elongation factor Tu GTP binding domain AMD14_RS14085 PF11987 Translation-initiation factor 2 AMD14_RS14085 PF08364 Bacterial translation initiation factor IF-2 associated region AMD14_RS14085 PF04760 Translation initiation factor IF-2, N-terminal region AMD14_RS14090 PF08529 NusA N-terminal domain AMD14_RS14090 PF13184 NusA-like KH domain AMD14_RS14090 PF00575 S1 RNA binding domain AMD14_RS14095 PF17384 RimP C-terminal SH3 domain AMD14_RS14095 PF02576 RimP N-terminal domain AMD14_RS14105 PF00361 Proton-conducting membrane transporter AMD14_RS14110 PF00361 Proton-conducting membrane transporter AMD14_RS14110 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMD14_RS14115 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD14_RS14115 PF00361 Proton-conducting membrane transporter AMD14_RS14120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD14_RS14125 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD14_RS14130 PF12838 4Fe-4S dicluster domain AMD14_RS14135 PF00146 NADH dehydrogenase AMD14_RS14140 PF00384 Molybdopterin oxidoreductase AMD14_RS14140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD14_RS14140 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMD14_RS14145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD14_RS14145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD14_RS14145 PF10531 SLBB domain AMD14_RS14155 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD14_RS14160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD14_RS14165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD14_RS14170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD14_RS14185 PF00121 Triosephosphate isomerase AMD14_RS14190 PF00106 short chain dehydrogenase AMD14_RS14205 PF03707 Bacterial signalling protein N terminal repeat AMD14_RS14205 PF00563 EAL domain AMD14_RS14205 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS14225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD14_RS14225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD14_RS14225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD14_RS14225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD14_RS14230 PF17848 Acetyl-coA carboxylase zinc finger domain AMD14_RS14230 PF01039 Carboxyl transferase domain AMD14_RS14235 PF00290 Tryptophan synthase alpha chain AMD14_RS14245 PF00291 Pyridoxal-phosphate dependent enzyme AMD14_RS14250 PF03466 LysR substrate binding domain AMD14_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS14255 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD14_RS14260 PF01416 tRNA pseudouridine synthase AMD14_RS14280 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD14_RS14280 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD14_RS14285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD14_RS14285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD14_RS14290 PF01264 Chorismate synthase AMD14_RS14295 PF05175 Methyltransferase small domain AMD14_RS14300 PF02630 SCO1/SenC AMD14_RS14305 PF02666 Phosphatidylserine decarboxylase AMD14_RS14315 PF05872 Bacterial protein of unknown function (DUF853) AMD14_RS14320 PF00293 NUDIX domain AMD14_RS14335 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD14_RS14335 PF03449 Transcription elongation factor, N-terminal AMD14_RS14340 PF18693 TRAM domain AMD14_RS14340 PF04055 Radical SAM superfamily AMD14_RS14340 PF00919 Uncharacterized protein family UPF0004 AMD14_RS14345 PF01738 Dienelactone hydrolase family AMD14_RS14365 PF00692 dUTPase AMD14_RS14370 PF10609 NUBPL iron-transfer P-loop NTPase AMD14_RS14375 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS14375 PF00593 TonB dependent receptor AMD14_RS14390 PF01431 Peptidase family M13 AMD14_RS14390 PF05649 Peptidase family M13 AMD14_RS14395 PF05649 Peptidase family M13 AMD14_RS14395 PF01431 Peptidase family M13 AMD14_RS14410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD14_RS14415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS14415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD14_RS14420 PF01266 FAD dependent oxidoreductase AMD14_RS14425 PF04235 Protein of unknown function (DUF418) AMD14_RS14430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD14_RS14435 PF00877 NlpC/P60 family AMD14_RS14440 PF00877 NlpC/P60 family AMD14_RS14455 PF00375 Sodium:dicarboxylate symporter family AMD14_RS14460 PF00245 Alkaline phosphatase AMD14_RS14465 PF09179 TilS substrate binding domain AMD14_RS14465 PF01171 PP-loop family AMD14_RS14465 PF11734 TilS substrate C-terminal domain AMD14_RS14470 PF02609 Exonuclease VII small subunit AMD14_RS14475 PF00348 Polyprenyl synthetase AMD14_RS14480 PF14521 Lysine-specific metallo-endopeptidase AMD14_RS14490 PF01523 Putative modulator of DNA gyrase AMD14_RS14495 PF04751 Protein of unknown function (DUF615) AMD14_RS14500 PF01523 Putative modulator of DNA gyrase AMD14_RS14510 PF13502 AsmA-like C-terminal region AMD14_RS14510 PF13116 Protein of unknown function AMD14_RS14515 PF00575 S1 RNA binding domain AMD14_RS14515 PF10150 Ribonuclease E/G family AMD14_RS14520 PF02545 Maf-like protein AMD14_RS14525 PF04402 Protein of unknown function (DUF541) AMD14_RS14540 PF02590 Predicted SPOUT methyltransferase AMD14_RS14555 PF01467 Cytidylyltransferase-like AMD14_RS14570 PF08264 Anticodon-binding domain of tRNA AMD14_RS14570 PF00133 tRNA synthetases class I (I, L, M and V) AMD14_RS14570 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD14_RS14580 PF00085 Thioredoxin AMD14_RS14605 PF04070 Domain of unknown function (DUF378) AMD14_RS14610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD14_RS14620 PF03466 LysR substrate binding domain AMD14_RS14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS14650 PF00005 ABC transporter AMD14_RS14650 PF00664 ABC transporter transmembrane region AMD14_RS14660 PF00873 AcrB/AcrD/AcrF family AMD14_RS14675 PF02321 Outer membrane efflux protein AMD14_RS14680 PF00072 Response regulator receiver domain AMD14_RS14680 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS14685 PF00672 HAMP domain AMD14_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS14685 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS14690 PF00999 Sodium/hydrogen exchanger family AMD14_RS14695 PF00144 Beta-lactamase AMD14_RS14700 PF03737 Aldolase/RraA AMD14_RS14720 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS14725 PF01479 S4 domain AMD14_RS14725 PF00849 RNA pseudouridylate synthase AMD14_RS14730 PF08448 PAS fold AMD14_RS14730 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS14730 PF00563 EAL domain AMD14_RS14735 PF00271 Helicase conserved C-terminal domain AMD14_RS14735 PF03880 DbpA RNA binding domain AMD14_RS14735 PF00270 DEAD/DEAH box helicase AMD14_RS14780 PF06029 AlkA N-terminal domain AMD14_RS14780 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD14_RS14785 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD14_RS14785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD14_RS14795 PF00654 Voltage gated chloride channel AMD14_RS14800 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS14800 PF00107 Zinc-binding dehydrogenase AMD14_RS14815 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS14815 PF00593 TonB dependent receptor AMD14_RS14825 PF00082 Subtilase family AMD14_RS14825 PF01483 Proprotein convertase P-domain AMD14_RS14835 PF00082 Subtilase family AMD14_RS14835 PF01483 Proprotein convertase P-domain AMD14_RS14845 PF00248 Aldo/keto reductase family AMD14_RS14850 PF07690 Major Facilitator Superfamily AMD14_RS14855 PF03466 LysR substrate binding domain AMD14_RS14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS14865 PF12833 Helix-turn-helix domain AMD14_RS14865 PF06719 AraC-type transcriptional regulator N-terminus AMD14_RS14875 PF00440 Bacterial regulatory proteins, tetR family AMD14_RS14875 PF16859 Tetracyclin repressor-like, C-terminal domain AMD14_RS14880 PF02321 Outer membrane efflux protein AMD14_RS14885 PF00873 AcrB/AcrD/AcrF family AMD14_RS14890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS14890 PF00529 HlyD membrane-fusion protein of T1SS AMD14_RS14900 PF01475 Ferric uptake regulator family AMD14_RS14905 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD14_RS14930 PF06123 Inner membrane protein CreD AMD14_RS14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS14940 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS14940 PF00672 HAMP domain AMD14_RS14945 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS14945 PF00072 Response regulator receiver domain AMD14_RS14950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMD14_RS14960 PF00270 DEAD/DEAH box helicase AMD14_RS14960 PF00271 Helicase conserved C-terminal domain AMD14_RS14960 PF03461 TRCF domain AMD14_RS14960 PF17757 UvrB interaction domain AMD14_RS14960 PF02559 CarD-like/TRCF domain AMD14_RS14995 PF01584 CheW-like domain AMD14_RS14995 PF02895 Signal transducing histidine kinase, homodimeric domain AMD14_RS14995 PF09078 CheY binding AMD14_RS14995 PF01627 Hpt domain AMD14_RS14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS15000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS15000 PF00672 HAMP domain AMD14_RS15000 PF02203 Tar ligand binding domain homologue AMD14_RS15005 PF01584 CheW-like domain AMD14_RS15010 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS15010 PF13426 PAS domain AMD14_RS15010 PF00563 EAL domain AMD14_RS15015 PF03705 CheR methyltransferase, all-alpha domain AMD14_RS15015 PF01739 CheR methyltransferase, SAM binding domain AMD14_RS15020 PF00072 Response regulator receiver domain AMD14_RS15020 PF01339 CheB methylesterase AMD14_RS15025 PF13091 PLD-like domain AMD14_RS15030 PF01431 Peptidase family M13 AMD14_RS15030 PF05649 Peptidase family M13 AMD14_RS15040 PF00300 Histidine phosphatase superfamily (branch 1) AMD14_RS15045 PF04493 Endonuclease V AMD14_RS15055 PF02678 Pirin AMD14_RS15055 PF05726 Pirin C-terminal cupin domain AMD14_RS15070 PF05726 Pirin C-terminal cupin domain AMD14_RS15070 PF02678 Pirin AMD14_RS15075 PF02554 Carbon starvation protein CstA AMD14_RS15075 PF13722 5TM C-terminal transporter carbon starvation CstA AMD14_RS15080 PF04328 Selenoprotein, putative AMD14_RS15125 PF01527 Transposase AMD14_RS15135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD14_RS15135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD14_RS15140 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD14_RS15140 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD14_RS15145 PF01799 [2Fe-2S] binding domain AMD14_RS15145 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD14_RS15145 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD14_RS15150 PF09277 Erythronolide synthase, docking AMD14_RS15150 PF00698 Acyl transferase domain AMD14_RS15150 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD14_RS15150 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS15150 PF08990 Erythronolide synthase docking AMD14_RS15150 PF16197 Ketoacyl-synthetase C-terminal extension AMD14_RS15150 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD14_RS15150 PF08659 KR domain AMD14_RS15150 PF00550 Phosphopantetheine attachment site AMD14_RS15150 PF14765 Polyketide synthase dehydratase AMD14_RS15155 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS15155 PF00360 Phytochrome region AMD14_RS15155 PF01590 GAF domain AMD14_RS15155 PF00563 EAL domain AMD14_RS15160 PF00436 Single-strand binding protein family AMD14_RS15165 PF00348 Polyprenyl synthetase AMD14_RS15175 PF02875 Mur ligase family, glutamate ligase domain AMD14_RS15175 PF08245 Mur ligase middle domain AMD14_RS15190 PF01842 ACT domain AMD14_RS15190 PF00696 Amino acid kinase family AMD14_RS15195 PF02567 Phenazine biosynthesis-like protein AMD14_RS15200 PF02567 Phenazine biosynthesis-like protein AMD14_RS15210 PF02566 OsmC-like protein AMD14_RS15215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD14_RS15215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD14_RS15220 PF03652 Holliday junction resolvase AMD14_RS15225 PF02622 Uncharacterized ACR, COG1678 AMD14_RS15235 PF00117 Glutamine amidotransferase class-I AMD14_RS15235 PF00958 GMP synthase C terminal domain AMD14_RS15235 PF13673 Acetyltransferase (GNAT) domain AMD14_RS15235 PF13302 Acetyltransferase (GNAT) domain AMD14_RS15235 PF03352 Methyladenine glycosylase AMD14_RS15245 PF03211 Pectate lyase AMD14_RS15250 PF00437 Type II/IV secretion system protein AMD14_RS15260 PF01168 Alanine racemase, N-terminal domain AMD14_RS15265 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD14_RS15265 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD14_RS15275 PF01551 Peptidase family M23 AMD14_RS15295 PF01965 DJ-1/PfpI family AMD14_RS15305 PF02082 Transcriptional regulator AMD14_RS15310 PF01458 Uncharacterized protein family (UPF0051) AMD14_RS15315 PF00005 ABC transporter AMD14_RS15320 PF01458 Uncharacterized protein family (UPF0051) AMD14_RS15325 PF00266 Aminotransferase class-V AMD14_RS15335 PF00355 Rieske [2Fe-2S] domain AMD14_RS15340 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS15340 PF00593 TonB dependent receptor AMD14_RS15345 PF13640 2OG-Fe(II) oxygenase superfamily AMD14_RS15345 PF18331 PKHD-type hydroxylase C-terminal domain AMD14_RS15370 PF02424 ApbE family AMD14_RS15375 PF00667 FAD binding domain AMD14_RS15375 PF00258 Flavodoxin AMD14_RS15375 PF00175 Oxidoreductase NAD-binding domain AMD14_RS15395 PF07687 Peptidase dimerisation domain AMD14_RS15395 PF01546 Peptidase family M20/M25/M40 AMD14_RS15405 PF01636 Phosphotransferase enzyme family AMD14_RS15410 PF00483 Nucleotidyl transferase AMD14_RS15415 PF00308 Bacterial dnaA protein AMD14_RS15420 PF01594 AI-2E family transporter AMD14_RS15430 PF02769 AIR synthase related protein, C-terminal domain AMD14_RS15430 PF00586 AIR synthase related protein, N-terminal domain AMD14_RS15440 PF00551 Formyl transferase AMD14_RS15460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD14_RS15465 PF01722 BolA-like protein AMD14_RS15470 PF00571 CBS domain AMD14_RS15470 PF01380 SIS domain AMD14_RS15485 PF03968 OstA-like protein AMD14_RS15490 PF00005 ABC transporter AMD14_RS15495 PF04963 Sigma-54 factor, core binding domain AMD14_RS15495 PF04552 Sigma-54, DNA binding domain AMD14_RS15495 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD14_RS15500 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD14_RS15505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD14_RS15510 PF02603 HPr Serine kinase N terminus AMD14_RS15510 PF07475 HPr Serine kinase C-terminal domain AMD14_RS15515 PF03668 P-loop ATPase protein family AMD14_RS15525 PF00381 PTS HPr component phosphorylation site AMD14_RS15530 PF00391 PEP-utilising enzyme, mobile domain AMD14_RS15530 PF02896 PEP-utilising enzyme, TIM barrel domain AMD14_RS15530 PF05524 PEP-utilising enzyme, N-terminal AMD14_RS15535 PF01769 Divalent cation transporter AMD14_RS15535 PF03448 MgtE intracellular N domain AMD14_RS15535 PF00571 CBS domain AMD14_RS15540 PF00756 Putative esterase AMD14_RS15545 PF02322 Cytochrome bd terminal oxidase subunit II AMD14_RS15550 PF01654 Cytochrome bd terminal oxidase subunit I AMD14_RS15560 PF00324 Amino acid permease AMD14_RS15565 PF00544 Pectate lyase AMD14_RS15570 PF00561 alpha/beta hydrolase fold AMD14_RS15580 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS15585 PF00324 Amino acid permease AMD14_RS15605 PF12706 Beta-lactamase superfamily domain AMD14_RS15610 PF04820 Tryptophan halogenase AMD14_RS15635 PF09278 MerR, DNA binding AMD14_RS15635 PF00376 MerR family regulatory protein AMD14_RS15640 PF07690 Major Facilitator Superfamily AMD14_RS15650 PF03738 Glutathionylspermidine synthase preATP-grasp AMD14_RS15675 PF04012 PspA/IM30 family AMD14_RS15685 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD14_RS15685 PF01243 Pyridoxamine 5'-phosphate oxidase AMD14_RS15690 PF01202 Shikimate kinase AMD14_RS15695 PF01761 3-dehydroquinate synthase AMD14_RS15705 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD14_RS15775 PF00158 Sigma-54 interaction domain AMD14_RS15775 PF02954 Bacterial regulatory protein, Fis family AMD14_RS15775 PF01590 GAF domain AMD14_RS15780 PF07690 Major Facilitator Superfamily AMD14_RS15785 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD14_RS15785 PF00672 HAMP domain AMD14_RS15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS15785 PF00072 Response regulator receiver domain AMD14_RS15785 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS15785 PF01627 Hpt domain AMD14_RS15790 PF01627 Hpt domain AMD14_RS15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS15790 PF00672 HAMP domain AMD14_RS15790 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD14_RS15790 PF00072 Response regulator receiver domain AMD14_RS15790 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS15800 PF01627 Hpt domain AMD14_RS15800 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS15800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS15800 PF00072 Response regulator receiver domain AMD14_RS15805 PF04264 YceI-like domain AMD14_RS15825 PF03313 Serine dehydratase alpha chain AMD14_RS15825 PF03315 Serine dehydratase beta chain AMD14_RS15830 PF12697 Alpha/beta hydrolase family AMD14_RS15835 PF03447 Homoserine dehydrogenase, NAD binding domain AMD14_RS15835 PF00742 Homoserine dehydrogenase AMD14_RS15835 PF00696 Amino acid kinase family AMD14_RS15840 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD14_RS15845 PF00561 alpha/beta hydrolase fold AMD14_RS15850 PF08525 Opacity-associated protein A N-terminal motif AMD14_RS15850 PF01551 Peptidase family M23 AMD14_RS15850 PF01476 LysM domain AMD14_RS15855 PF00009 Elongation factor Tu GTP binding domain AMD14_RS15855 PF16658 Class II release factor RF3, C-terminal domain AMD14_RS15860 PF03006 Haemolysin-III related AMD14_RS15865 PF05170 AsmA family AMD14_RS15870 PF00478 IMP dehydrogenase / GMP reductase domain AMD14_RS15870 PF00571 CBS domain AMD14_RS15875 PF00535 Glycosyl transferase family 2 AMD14_RS15880 PF00912 Transglycosylase AMD14_RS15885 PF01430 Hsp33 protein AMD14_RS15895 PF00593 TonB dependent receptor AMD14_RS15895 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS15905 PF00440 Bacterial regulatory proteins, tetR family AMD14_RS15910 PF00561 alpha/beta hydrolase fold AMD14_RS15915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD14_RS15915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD14_RS15915 PF09317 Domain of unknown function (DUF1974) AMD14_RS15940 PF01597 Glycine cleavage H-protein AMD14_RS15945 PF01571 Aminomethyltransferase folate-binding domain AMD14_RS15945 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD14_RS15955 PF01145 SPFH domain / Band 7 family AMD14_RS15955 PF16200 C-terminal region of band_7 AMD14_RS15960 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMD14_RS15965 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD14_RS15970 PF00459 Inositol monophosphatase family AMD14_RS15975 PF00293 NUDIX domain AMD14_RS15980 PF00202 Aminotransferase class-III AMD14_RS15985 PF04452 RNA methyltransferase AMD14_RS15990 PF02685 Glucokinase AMD14_RS16005 PF01476 LysM domain AMD14_RS16005 PF00704 Glycosyl hydrolases family 18 AMD14_RS16010 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD14_RS16010 PF02838 Glycosyl hydrolase family 20, domain 2 AMD14_RS16010 PF07691 PA14 domain AMD14_RS16020 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD14_RS16020 PF14310 Fibronectin type III-like domain AMD14_RS16020 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD14_RS16020 PF07691 PA14 domain AMD14_RS16030 PF01301 Glycosyl hydrolases family 35 AMD14_RS16035 PF13520 Amino acid permease AMD14_RS16045 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD14_RS16045 PF02056 Family 4 glycosyl hydrolase AMD14_RS16055 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD14_RS16055 PF07971 Glycosyl hydrolase family 92 AMD14_RS16060 PF01301 Glycosyl hydrolases family 35 AMD14_RS16090 PF03932 CutC family AMD14_RS16095 PF01112 Asparaginase AMD14_RS16105 PF13302 Acetyltransferase (GNAT) domain AMD14_RS16120 PF00072 Response regulator receiver domain AMD14_RS16120 PF01584 CheW-like domain AMD14_RS16120 PF02895 Signal transducing histidine kinase, homodimeric domain AMD14_RS16120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS16120 PF01627 Hpt domain AMD14_RS16125 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMD14_RS16125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS16130 PF01584 CheW-like domain AMD14_RS16135 PF00072 Response regulator receiver domain AMD14_RS16140 PF00072 Response regulator receiver domain AMD14_RS16145 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD14_RS16145 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD14_RS16155 PF03747 ADP-ribosylglycohydrolase AMD14_RS16160 PF00814 Glycoprotease family AMD14_RS16165 PF13307 Helicase C-terminal domain AMD14_RS16165 PF04851 Type III restriction enzyme, res subunit AMD14_RS16175 PF00905 Penicillin binding protein transpeptidase domain AMD14_RS16175 PF00912 Transglycosylase AMD14_RS16175 PF14814 Bifunctional transglycosylase second domain AMD14_RS16180 PF00535 Glycosyl transferase family 2 AMD14_RS16190 PF13291 ACT domain AMD14_RS16190 PF04607 Region found in RelA / SpoT proteins AMD14_RS16190 PF02824 TGS domain AMD14_RS16195 PF12706 Beta-lactamase superfamily domain AMD14_RS16200 PF03070 TENA/THI-4/PQQC family AMD14_RS16205 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD14_RS16210 PF13186 Iron-sulfur cluster-binding domain AMD14_RS16210 PF04055 Radical SAM superfamily AMD14_RS16225 PF02685 Glucokinase AMD14_RS16235 PF00271 Helicase conserved C-terminal domain AMD14_RS16235 PF00270 DEAD/DEAH box helicase AMD14_RS16235 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD14_RS16235 PF04408 Helicase associated domain (HA2) AMD14_RS16235 PF11898 Domain of unknown function (DUF3418) AMD14_RS16240 PF00210 Ferritin-like domain AMD14_RS16245 PF09382 RQC domain AMD14_RS16245 PF16124 RecQ zinc-binding AMD14_RS16245 PF00570 HRDC domain AMD14_RS16245 PF00271 Helicase conserved C-terminal domain AMD14_RS16245 PF00270 DEAD/DEAH box helicase AMD14_RS16280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS16280 PF02203 Tar ligand binding domain homologue AMD14_RS16280 PF00672 HAMP domain AMD14_RS16285 PF01810 LysE type translocator AMD14_RS16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS16290 PF03466 LysR substrate binding domain AMD14_RS16300 PF07536 HWE histidine kinase AMD14_RS16300 PF13426 PAS domain AMD14_RS16300 PF13581 Histidine kinase-like ATPase domain AMD14_RS16305 PF06508 Queuosine biosynthesis protein QueC AMD14_RS16315 PF04055 Radical SAM superfamily AMD14_RS16325 PF00691 OmpA family AMD14_RS16330 PF04052 TolB amino-terminal domain AMD14_RS16330 PF07676 WD40-like Beta Propeller Repeat AMD14_RS16340 PF02472 Biopolymer transport protein ExbD/TolR AMD14_RS16345 PF01618 MotA/TolQ/ExbB proton channel family AMD14_RS16350 PF03061 Thioesterase superfamily AMD14_RS16355 PF17864 RuvB AAA lid domain AMD14_RS16355 PF05491 RuvB C-terminal winged helix domain AMD14_RS16355 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMD14_RS16365 PF02705 K+ potassium transporter AMD14_RS16370 PF01330 RuvA N terminal domain AMD14_RS16370 PF07499 RuvA, C-terminal domain AMD14_RS16375 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD14_RS16380 PF01709 Transcriptional regulator AMD14_RS16395 PF02938 GAD domain AMD14_RS16395 PF01336 OB-fold nucleic acid binding domain AMD14_RS16395 PF00152 tRNA synthetases class II (D, K and N) AMD14_RS16410 PF07690 Major Facilitator Superfamily AMD14_RS16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS16435 PF03466 LysR substrate binding domain AMD14_RS16445 PF12848 ABC transporter AMD14_RS16445 PF00005 ABC transporter AMD14_RS16450 PF00593 TonB dependent receptor AMD14_RS16450 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS16465 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS16465 PF00593 TonB dependent receptor AMD14_RS16470 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS16470 PF00593 TonB dependent receptor AMD14_RS16475 PF00067 Cytochrome P450 AMD14_RS16480 PF00999 Sodium/hydrogen exchanger family AMD14_RS16480 PF02254 TrkA-N domain AMD14_RS16505 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS16505 PF07660 Secretin and TonB N terminus short domain AMD14_RS16505 PF00593 TonB dependent receptor AMD14_RS16515 PF04183 IucA / IucC family AMD14_RS16515 PF06276 Ferric iron reductase FhuF-like transporter AMD14_RS16520 PF07690 Major Facilitator Superfamily AMD14_RS16525 PF04183 IucA / IucC family AMD14_RS16525 PF06276 Ferric iron reductase FhuF-like transporter AMD14_RS16530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD14_RS16530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD14_RS16545 PF02654 Cobalamin-5-phosphate synthase AMD14_RS16555 PF02277 Phosphoribosyltransferase AMD14_RS16560 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD14_RS16565 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD14_RS16565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD14_RS16570 PF00155 Aminotransferase class I and II AMD14_RS16575 PF17113 Regulatory signalling modulator protein AmpE AMD14_RS16575 PF03186 CobD/Cbib protein AMD14_RS16580 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD14_RS16580 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD14_RS16595 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS16595 PF00593 TonB dependent receptor AMD14_RS16600 PF07724 AAA domain (Cdc48 subfamily) AMD14_RS16600 PF17871 AAA lid domain AMD14_RS16600 PF02861 Clp amino terminal domain, pathogenicity island component AMD14_RS16600 PF10431 C-terminal, D2-small domain, of ClpB protein AMD14_RS16600 PF00004 ATPase family associated with various cellular activities (AAA) AMD14_RS16605 PF00005 ABC transporter AMD14_RS16610 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS16615 PF09084 NMT1/THI5 like AMD14_RS16620 PF00248 Aldo/keto reductase family AMD14_RS16625 PF00296 Luciferase-like monooxygenase AMD14_RS16630 PF00593 TonB dependent receptor AMD14_RS16630 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS16635 PF01541 GIY-YIG catalytic domain AMD14_RS16670 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS16670 PF00593 TonB dependent receptor AMD14_RS16675 PF02358 Trehalose-phosphatase AMD14_RS16680 PF00723 Glycosyl hydrolases family 15 AMD14_RS16685 PF00982 Glycosyltransferase family 20 AMD14_RS16690 PF01011 PQQ enzyme repeat AMD14_RS16695 PF00672 HAMP domain AMD14_RS16695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS16695 PF02203 Tar ligand binding domain homologue AMD14_RS16700 PF04134 Protein of unknown function, DUF393 AMD14_RS16710 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD14_RS16715 PF00849 RNA pseudouridylate synthase AMD14_RS16720 PF13525 Outer membrane lipoprotein AMD14_RS16730 PF00795 Carbon-nitrogen hydrolase AMD14_RS16730 PF02540 NAD synthase AMD14_RS16760 PF13406 Transglycosylase SLT domain AMD14_RS16765 PF13700 Domain of unknown function (DUF4158) AMD14_RS16765 PF01526 Tn3 transposase DDE domain AMD14_RS16785 PF01129 NAD:arginine ADP-ribosyltransferase AMD14_RS16805 PF02629 CoA binding domain AMD14_RS16805 PF00549 CoA-ligase AMD14_RS16810 PF00549 CoA-ligase AMD14_RS16810 PF08442 ATP-grasp domain AMD14_RS16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS16815 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS16820 PF00158 Sigma-54 interaction domain AMD14_RS16820 PF00072 Response regulator receiver domain AMD14_RS16820 PF02954 Bacterial regulatory protein, Fis family AMD14_RS16825 PF00437 Type II/IV secretion system protein AMD14_RS16825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD14_RS16830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD14_RS16830 PF00437 Type II/IV secretion system protein AMD14_RS16835 PF00437 Type II/IV secretion system protein AMD14_RS16835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD14_RS16840 PF00114 Pilin (bacterial filament) AMD14_RS16840 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS16845 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS16845 PF00114 Pilin (bacterial filament) AMD14_RS16850 PF00482 Type II secretion system (T2SS), protein F AMD14_RS16855 PF06750 Bacterial Peptidase A24 N-terminal domain AMD14_RS16855 PF01478 Type IV leader peptidase family AMD14_RS16860 PF01121 Dephospho-CoA kinase AMD14_RS16880 PF13333 Integrase core domain AMD14_RS16880 PF00665 Integrase core domain AMD14_RS16880 PF13276 HTH-like domain AMD14_RS16885 PF16736 Single Cache-like AMD14_RS16885 PF00989 PAS fold AMD14_RS16885 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS16890 PF00072 Response regulator receiver domain AMD14_RS16890 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS16900 PF08443 RimK-like ATP-grasp domain AMD14_RS16900 PF18030 RimK PreATP-grasp domain AMD14_RS16905 PF00128 Alpha amylase, catalytic domain AMD14_RS16905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD14_RS16960 PF04002 RadC-like JAB domain AMD14_RS16985 PF13426 PAS domain AMD14_RS16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS16985 PF00072 Response regulator receiver domain AMD14_RS16990 PF13426 PAS domain AMD14_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS16990 PF00072 Response regulator receiver domain AMD14_RS17030 PF01527 Transposase AMD14_RS17075 PF00072 Response regulator receiver domain AMD14_RS17075 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS17075 PF13188 PAS domain AMD14_RS17075 PF08448 PAS fold AMD14_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS17100 PF13676 TIR domain AMD14_RS17115 PF00657 GDSL-like Lipase/Acylhydrolase AMD14_RS17115 PF03797 Autotransporter beta-domain AMD14_RS17125 PF05690 Thiazole biosynthesis protein ThiG AMD14_RS17130 PF02390 Putative methyltransferase AMD14_RS17135 PF03600 Citrate transporter AMD14_RS17135 PF02080 TrkA-C domain AMD14_RS17150 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD14_RS17155 PF01741 Large-conductance mechanosensitive channel, MscL AMD14_RS17170 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS17180 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AMD14_RS17180 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD14_RS17180 PF00703 Glycosyl hydrolases family 2 AMD14_RS17185 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD14_RS17185 PF10566 Glycoside hydrolase 97 AMD14_RS17185 PF14508 Glycosyl-hydrolase 97 N-terminal AMD14_RS17195 PF00135 Carboxylesterase family AMD14_RS17200 PF00588 SpoU rRNA Methylase family AMD14_RS17200 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD14_RS17210 PF01433 Peptidase family M1 domain AMD14_RS17210 PF11838 ERAP1-like C-terminal domain AMD14_RS17260 PF00873 AcrB/AcrD/AcrF family AMD14_RS17265 PF00529 HlyD membrane-fusion protein of T1SS AMD14_RS17265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS17270 PF00009 Elongation factor Tu GTP binding domain AMD14_RS17275 PF01507 Phosphoadenosine phosphosulfate reductase family AMD14_RS17280 PF00667 FAD binding domain AMD14_RS17280 PF00258 Flavodoxin AMD14_RS17280 PF00175 Oxidoreductase NAD-binding domain AMD14_RS17285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD14_RS17285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD14_RS17290 PF01507 Phosphoadenosine phosphosulfate reductase family AMD14_RS17310 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS17310 PF00072 Response regulator receiver domain AMD14_RS17310 PF01627 Hpt domain AMD14_RS17325 PF03466 LysR substrate binding domain AMD14_RS17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS17330 PF14824 Sirohaem biosynthesis protein central AMD14_RS17330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD14_RS17330 PF10414 Sirohaem synthase dimerisation region AMD14_RS17335 PF00291 Pyridoxal-phosphate dependent enzyme AMD14_RS17345 PF01661 Macro domain AMD14_RS17350 PF00274 Fructose-bisphosphate aldolase class-I AMD14_RS17355 PF02887 Pyruvate kinase, alpha/beta domain AMD14_RS17355 PF00224 Pyruvate kinase, barrel domain AMD14_RS17360 PF13419 Haloacid dehalogenase-like hydrolase AMD14_RS17365 PF00162 Phosphoglycerate kinase AMD14_RS17385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD14_RS17385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD14_RS17395 PF03922 OmpW family AMD14_RS17400 PF03922 OmpW family AMD14_RS17410 PF04273 Putative phosphatase (DUF442) AMD14_RS17410 PF00753 Metallo-beta-lactamase superfamily AMD14_RS17420 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS17425 PF03459 TOBE domain AMD14_RS17425 PF00005 ABC transporter AMD14_RS17460 PF01476 LysM domain AMD14_RS17460 PF03734 L,D-transpeptidase catalytic domain AMD14_RS17465 PF01551 Peptidase family M23 AMD14_RS17465 PF04225 Opacity-associated protein A LysM-like domain AMD14_RS17475 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS17475 PF00593 TonB dependent receptor AMD14_RS17495 PF02779 Transketolase, pyrimidine binding domain AMD14_RS17495 PF02780 Transketolase, C-terminal domain AMD14_RS17495 PF00456 Transketolase, thiamine diphosphate binding domain AMD14_RS17500 PF00375 Sodium:dicarboxylate symporter family AMD14_RS17510 PF07584 Aerotolerance regulator N-terminal AMD14_RS17510 PF00092 von Willebrand factor type A domain AMD14_RS17530 PF17863 AAA lid domain AMD14_RS17530 PF07726 ATPase family associated with various cellular activities (AAA) AMD14_RS17535 PF07660 Secretin and TonB N terminus short domain AMD14_RS17535 PF00263 Bacterial type II and III secretion system protein AMD14_RS17535 PF11741 AMIN domain AMD14_RS17535 PF03958 Bacterial type II/III secretion system short domain AMD14_RS17540 PF04351 Pilus assembly protein, PilP AMD14_RS17545 PF04350 Pilus assembly protein, PilO AMD14_RS17550 PF05137 Fimbrial assembly protein (PilN) AMD14_RS17555 PF11104 Type IV pilus assembly protein PilM; AMD14_RS17560 PF00905 Penicillin binding protein transpeptidase domain AMD14_RS17560 PF00912 Transglycosylase AMD14_RS17560 PF17092 Penicillin-binding protein OB-like domain AMD14_RS17570 PF00285 Citrate synthase, C-terminal domain AMD14_RS17575 PF01197 Ribosomal protein L31 AMD14_RS17580 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD14_RS17585 PF00270 DEAD/DEAH box helicase AMD14_RS17585 PF17191 RecG wedge domain AMD14_RS17585 PF00271 Helicase conserved C-terminal domain AMD14_RS17590 PF01042 Endoribonuclease L-PSP AMD14_RS17595 PF04607 Region found in RelA / SpoT proteins AMD14_RS17595 PF02824 TGS domain AMD14_RS17595 PF13291 ACT domain AMD14_RS17600 PF01192 RNA polymerase Rpb6 AMD14_RS17605 PF00625 Guanylate kinase AMD14_RS17610 PF03755 YicC-like family, N-terminal region AMD14_RS17610 PF08340 Domain of unknown function (DUF1732) AMD14_RS17615 PF01138 3' exoribonuclease family, domain 1 AMD14_RS17615 PF03725 3' exoribonuclease family, domain 2 AMD14_RS17625 PF01725 Ham1 family AMD14_RS17630 PF06969 HemN C-terminal domain AMD14_RS17630 PF04055 Radical SAM superfamily AMD14_RS17645 PF00557 Metallopeptidase family M24 AMD14_RS17660 PF03695 Uncharacterised protein family (UPF0149) AMD14_RS17670 PF05164 Cell division protein ZapA AMD14_RS17675 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD14_RS17685 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD14_RS17695 PF13369 Transglutaminase-like superfamily AMD14_RS17700 PF00301 Rubredoxin AMD14_RS17705 PF02581 Thiamine monophosphate synthase AMD14_RS17720 PF00202 Aminotransferase class-III AMD14_RS17725 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS17725 PF17874 MalT-like TPR region AMD14_RS17730 PF00127 Copper binding proteins, plastocyanin/azurin family AMD14_RS17735 PF00155 Aminotransferase class I and II AMD14_RS17745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD14_RS17745 PF00034 Cytochrome c AMD14_RS17750 PF01593 Flavin containing amine oxidoreductase AMD14_RS17765 PF00202 Aminotransferase class-III AMD14_RS17770 PF00027 Cyclic nucleotide-binding domain AMD14_RS17770 PF00520 Ion transport protein AMD14_RS17785 PF01569 PAP2 superfamily AMD14_RS17790 PF01062 Bestrophin, RFP-TM, chloride channel AMD14_RS17800 PF01225 Mur ligase family, catalytic domain AMD14_RS17800 PF08245 Mur ligase middle domain AMD14_RS17800 PF02875 Mur ligase family, glutamate ligase domain AMD14_RS17810 PF00365 Phosphofructokinase AMD14_RS17820 PF03030 Inorganic H+ pyrophosphatase AMD14_RS17830 PF00719 Inorganic pyrophosphatase AMD14_RS17840 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS17840 PF00593 TonB dependent receptor AMD14_RS17845 PF12833 Helix-turn-helix domain AMD14_RS17850 PF18500 CadC C-terminal domain 1 AMD14_RS17850 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS17855 PF13667 ThiC-associated domain AMD14_RS17855 PF01964 Radical SAM ThiC family AMD14_RS17860 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS17860 PF00593 TonB dependent receptor AMD14_RS17865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS17865 PF00672 HAMP domain AMD14_RS17875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD14_RS17875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMD14_RS17880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD14_RS17880 PF00205 Thiamine pyrophosphate enzyme, central domain AMD14_RS17880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD14_RS17890 PF00291 Pyridoxal-phosphate dependent enzyme AMD14_RS17895 PF08502 LeuA allosteric (dimerisation) domain AMD14_RS17895 PF00682 HMGL-like AMD14_RS17900 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD14_RS17905 PF00694 Aconitase C-terminal domain AMD14_RS17910 PF00330 Aconitase family (aconitate hydratase) AMD14_RS17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS17920 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS17935 PF02321 Outer membrane efflux protein AMD14_RS17940 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD14_RS17945 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD14_RS17970 PF00390 Malic enzyme, N-terminal domain AMD14_RS17970 PF03949 Malic enzyme, NAD binding domain AMD14_RS17970 PF01515 Phosphate acetyl/butaryl transferase AMD14_RS17975 PF00375 Sodium:dicarboxylate symporter family AMD14_RS17985 PF02743 Cache domain AMD14_RS17985 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS17990 PF07690 Major Facilitator Superfamily AMD14_RS18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS18000 PF03466 LysR substrate binding domain AMD14_RS18005 PF00248 Aldo/keto reductase family AMD14_RS18020 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS18020 PF00072 Response regulator receiver domain AMD14_RS18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS18030 PF08521 Two-component sensor kinase N-terminal AMD14_RS18030 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS18035 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS18035 PF00072 Response regulator receiver domain AMD14_RS18045 PF03600 Citrate transporter AMD14_RS18050 PF00106 short chain dehydrogenase AMD14_RS18055 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS18070 PF00128 Alpha amylase, catalytic domain AMD14_RS18085 PF03193 RsgA GTPase AMD14_RS18090 PF00155 Aminotransferase class I and II AMD14_RS18105 PF00593 TonB dependent receptor AMD14_RS18105 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS18110 PF01522 Polysaccharide deacetylase AMD14_RS18115 PF00462 Glutaredoxin AMD14_RS18130 PF01527 Transposase AMD14_RS18150 PF02645 Uncharacterised protein, DegV family COG1307 AMD14_RS18155 PF01327 Polypeptide deformylase AMD14_RS18160 PF03960 ArsC family AMD14_RS18175 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AMD14_RS18180 PF01270 Glycosyl hydrolases family 8 AMD14_RS18185 PF03170 Bacterial cellulose synthase subunit AMD14_RS18190 PF03552 Cellulose synthase AMD14_RS18190 PF07238 PilZ domain AMD14_RS18190 PF00535 Glycosyl transferase family 2 AMD14_RS18205 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD14_RS18205 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMD14_RS18250 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS18250 PF00593 TonB dependent receptor AMD14_RS18260 PF00392 Bacterial regulatory proteins, gntR family AMD14_RS18260 PF07702 UTRA domain AMD14_RS18270 PF00263 Bacterial type II and III secretion system protein AMD14_RS18270 PF03958 Bacterial type II/III secretion system short domain AMD14_RS18280 PF10741 Type II secretion system (T2SS), protein M subtype b AMD14_RS18285 PF05137 Fimbrial assembly protein (PilN) AMD14_RS18290 PF03934 Type II secretion system (T2SS), protein K AMD14_RS18300 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS18305 PF12019 Type II transport protein GspH AMD14_RS18310 PF08334 Type II secretion system (T2SS), protein G AMD14_RS18315 PF00482 Type II secretion system (T2SS), protein F AMD14_RS18320 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD14_RS18320 PF00437 Type II/IV secretion system protein AMD14_RS18325 PF04151 Bacterial pre-peptidase C-terminal domain AMD14_RS18325 PF00082 Subtilase family AMD14_RS18330 PF03895 YadA-like membrane anchor domain AMD14_RS18330 PF13018 Extended Signal Peptide of Type V secretion system AMD14_RS18330 PF05658 Head domain of trimeric autotransporter adhesin AMD14_RS18330 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD14_RS18335 PF04151 Bacterial pre-peptidase C-terminal domain AMD14_RS18335 PF00082 Subtilase family AMD14_RS18340 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD14_RS18340 PF05658 Head domain of trimeric autotransporter adhesin AMD14_RS18340 PF13018 Extended Signal Peptide of Type V secretion system AMD14_RS18340 PF03895 YadA-like membrane anchor domain AMD14_RS18350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMD14_RS18350 PF02769 AIR synthase related protein, C-terminal domain AMD14_RS18350 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMD14_RS18355 PF10411 Disulfide bond isomerase protein N-terminus AMD14_RS18355 PF13098 Thioredoxin-like domain AMD14_RS18360 PF02899 Phage integrase, N-terminal SAM-like domain AMD14_RS18360 PF00589 Phage integrase family AMD14_RS18375 PF03739 Lipopolysaccharide export system permease LptF/LptG AMD14_RS18385 PF00883 Cytosol aminopeptidase family, catalytic domain AMD14_RS18385 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD14_RS18400 PF10458 Valyl tRNA synthetase tRNA binding arm AMD14_RS18400 PF00133 tRNA synthetases class I (I, L, M and V) AMD14_RS18400 PF08264 Anticodon-binding domain of tRNA AMD14_RS18405 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS18405 PF00593 TonB dependent receptor AMD14_RS18410 PF01464 Transglycosylase SLT domain AMD14_RS18410 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AMD14_RS18415 PF00544 Pectate lyase AMD14_RS18430 PF01066 CDP-alcohol phosphatidyltransferase AMD14_RS18440 PF03129 Anticodon binding domain AMD14_RS18440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD14_RS18440 PF04073 Aminoacyl-tRNA editing domain AMD14_RS18445 PF00816 H-NS histone family AMD14_RS18455 PF02405 Permease MlaE AMD14_RS18460 PF00005 ABC transporter AMD14_RS18465 PF02470 MlaD protein AMD14_RS18465 PF03886 ABC-type transport auxiliary lipoprotein component AMD14_RS18485 PF05045 Rhamnan synthesis protein F AMD14_RS18485 PF14307 Glycosyltransferase WbsX AMD14_RS18490 PF01144 Coenzyme A transferase AMD14_RS18495 PF01144 Coenzyme A transferase AMD14_RS18500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD14_RS18500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD14_RS18500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD14_RS18500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD14_RS18505 PF01050 Mannose-6-phosphate isomerase AMD14_RS18505 PF00483 Nucleotidyl transferase AMD14_RS18510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD14_RS18510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD14_RS18510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD14_RS18515 PF04321 RmlD substrate binding domain AMD14_RS18520 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD14_RS18525 PF00483 Nucleotidyl transferase AMD14_RS18530 PF16363 GDP-mannose 4,6 dehydratase AMD14_RS18535 PF01012 Electron transfer flavoprotein domain AMD14_RS18540 PF00766 Electron transfer flavoprotein FAD-binding domain AMD14_RS18540 PF01012 Electron transfer flavoprotein domain AMD14_RS18550 PF01040 UbiA prenyltransferase family AMD14_RS18555 PF01565 FAD binding domain AMD14_RS18555 PF04030 D-arabinono-1,4-lactone oxidase AMD14_RS18560 PF00106 short chain dehydrogenase AMD14_RS18570 PF01370 NAD dependent epimerase/dehydratase family AMD14_RS18575 PF01593 Flavin containing amine oxidoreductase AMD14_RS18600 PF00535 Glycosyl transferase family 2 AMD14_RS18610 PF14524 Wzt C-terminal domain AMD14_RS18610 PF00005 ABC transporter AMD14_RS18620 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD14_RS18625 PF00571 CBS domain AMD14_RS18625 PF00291 Pyridoxal-phosphate dependent enzyme AMD14_RS18645 PF00437 Type II/IV secretion system protein AMD14_RS18655 PF14497 Glutathione S-transferase, C-terminal domain AMD14_RS18655 PF02798 Glutathione S-transferase, N-terminal domain AMD14_RS18665 PF00270 DEAD/DEAH box helicase AMD14_RS18665 PF00271 Helicase conserved C-terminal domain AMD14_RS18675 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS18675 PF00593 TonB dependent receptor AMD14_RS18680 PF01242 6-pyruvoyl tetrahydropterin synthase AMD14_RS18700 PF13185 GAF domain AMD14_RS18710 PF00756 Putative esterase AMD14_RS18715 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS18715 PF00593 TonB dependent receptor AMD14_RS18720 PF13419 Haloacid dehalogenase-like hydrolase AMD14_RS18725 PF00817 impB/mucB/samB family AMD14_RS18725 PF11799 impB/mucB/samB family C-terminal domain AMD14_RS18730 PF07977 FabA-like domain AMD14_RS18735 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD14_RS18735 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD14_RS18745 PF01432 Peptidase family M3 AMD14_RS18760 PF07732 Multicopper oxidase AMD14_RS18760 PF00394 Multicopper oxidase AMD14_RS18760 PF07731 Multicopper oxidase AMD14_RS18765 PF05275 Copper resistance protein B precursor (CopB) AMD14_RS18770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD14_RS18795 PF01380 SIS domain AMD14_RS18800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS18805 PF02687 FtsX-like permease family AMD14_RS18805 PF00005 ABC transporter AMD14_RS18805 PF12704 MacB-like periplasmic core domain AMD14_RS18810 PF00005 ABC transporter AMD14_RS18810 PF02687 FtsX-like permease family AMD14_RS18810 PF12704 MacB-like periplasmic core domain AMD14_RS18815 PF02687 FtsX-like permease family AMD14_RS18815 PF12704 MacB-like periplasmic core domain AMD14_RS18825 PF02954 Bacterial regulatory protein, Fis family AMD14_RS18825 PF00072 Response regulator receiver domain AMD14_RS18825 PF00158 Sigma-54 interaction domain AMD14_RS18830 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS18830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS18835 PF14602 Hexapeptide repeat of succinyl-transferase AMD14_RS18835 PF00132 Bacterial transferase hexapeptide (six repeats) AMD14_RS18835 PF12804 MobA-like NTP transferase domain AMD14_RS18850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD14_RS18850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD14_RS18855 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD14_RS18855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD14_RS18860 PF00231 ATP synthase AMD14_RS18865 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD14_RS18865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD14_RS18865 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD14_RS18870 PF00213 ATP synthase delta (OSCP) subunit AMD14_RS18875 PF00430 ATP synthase B/B' CF(0) AMD14_RS18880 PF00137 ATP synthase subunit C AMD14_RS18885 PF00119 ATP synthase A chain AMD14_RS18905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD14_RS18905 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS18915 PF02817 e3 binding domain AMD14_RS18915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD14_RS18915 PF00364 Biotin-requiring enzyme AMD14_RS18955 PF03180 NLPA lipoprotein AMD14_RS18960 PF00528 Binding-protein-dependent transport system inner membrane component AMD14_RS18965 PF00005 ABC transporter AMD14_RS18965 PF09383 NIL domain AMD14_RS18970 PF00892 EamA-like transporter family AMD14_RS18975 PF04461 Protein of unknown function (DUF520) AMD14_RS18985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS18985 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS18985 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMD14_RS18985 PF01627 Hpt domain AMD14_RS18985 PF00989 PAS fold AMD14_RS18985 PF00072 Response regulator receiver domain AMD14_RS19010 PF13419 Haloacid dehalogenase-like hydrolase AMD14_RS19015 PF00849 RNA pseudouridylate synthase AMD14_RS19015 PF01479 S4 domain AMD14_RS19020 PF08468 Methyltransferase small domain N-terminal AMD14_RS19020 PF05175 Methyltransferase small domain AMD14_RS19030 PF07995 Glucose / Sorbosone dehydrogenase AMD14_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS19040 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS19040 PF00989 PAS fold AMD14_RS19060 PF00842 Alanine racemase, C-terminal domain AMD14_RS19060 PF01168 Alanine racemase, N-terminal domain AMD14_RS19065 PF01266 FAD dependent oxidoreductase AMD14_RS19070 PF01037 Lrp/AsnC ligand binding domain AMD14_RS19080 PF01641 SelR domain AMD14_RS19090 PF01618 MotA/TolQ/ExbB proton channel family AMD14_RS19095 PF00691 OmpA family AMD14_RS19095 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD14_RS19120 PF01061 ABC-2 type transporter AMD14_RS19125 PF00005 ABC transporter AMD14_RS19130 PF00999 Sodium/hydrogen exchanger family AMD14_RS19135 PF02469 Fasciclin domain AMD14_RS19140 PF03167 Uracil DNA glycosylase superfamily AMD14_RS19150 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD14_RS19160 PF03466 LysR substrate binding domain AMD14_RS19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS19165 PF03358 NADPH-dependent FMN reductase AMD14_RS19170 PF00248 Aldo/keto reductase family AMD14_RS19180 PF05649 Peptidase family M13 AMD14_RS19180 PF01431 Peptidase family M13 AMD14_RS19200 PF13520 Amino acid permease AMD14_RS19210 PF00072 Response regulator receiver domain AMD14_RS19210 PF04397 LytTr DNA-binding domain AMD14_RS19215 PF06580 Histidine kinase AMD14_RS19215 PF02743 Cache domain AMD14_RS19215 PF00672 HAMP domain AMD14_RS19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS19230 PF05974 Domain of unknown function (DUF892) AMD14_RS19235 PF05067 Manganese containing catalase AMD14_RS19255 PF01739 CheR methyltransferase, SAM binding domain AMD14_RS19255 PF03705 CheR methyltransferase, all-alpha domain AMD14_RS19255 PF08448 PAS fold AMD14_RS19255 PF01339 CheB methylesterase AMD14_RS19270 PF02954 Bacterial regulatory protein, Fis family AMD14_RS19270 PF00072 Response regulator receiver domain AMD14_RS19270 PF00158 Sigma-54 interaction domain AMD14_RS19280 PF01654 Cytochrome bd terminal oxidase subunit I AMD14_RS19285 PF02322 Cytochrome bd terminal oxidase subunit II AMD14_RS19305 PF16363 GDP-mannose 4,6 dehydratase AMD14_RS19315 PF03275 UDP-galactopyranose mutase AMD14_RS19325 PF00664 ABC transporter transmembrane region AMD14_RS19325 PF00005 ABC transporter AMD14_RS19340 PF00107 Zinc-binding dehydrogenase AMD14_RS19340 PF13823 Alcohol dehydrogenase GroES-associated AMD14_RS19340 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS19385 PF00593 TonB dependent receptor AMD14_RS19385 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS19400 PF00005 ABC transporter AMD14_RS19410 PF03466 LysR substrate binding domain AMD14_RS19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS19415 PF01042 Endoribonuclease L-PSP AMD14_RS19425 PF01527 Transposase AMD14_RS19445 PF00672 HAMP domain AMD14_RS19445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD14_RS19445 PF02203 Tar ligand binding domain homologue AMD14_RS19460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS19460 PF03466 LysR substrate binding domain AMD14_RS19465 PF02525 Flavodoxin-like fold AMD14_RS19505 PF00557 Metallopeptidase family M24 AMD14_RS19525 PF00140 Sigma-70 factor, region 1.2 AMD14_RS19525 PF04546 Sigma-70, non-essential region AMD14_RS19525 PF03979 Sigma-70 factor, region 1.1 AMD14_RS19525 PF04539 Sigma-70 region 3 AMD14_RS19525 PF04542 Sigma-70 region 2 AMD14_RS19525 PF04545 Sigma-70, region 4 AMD14_RS19530 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD14_RS19535 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD14_RS19550 PF00925 GTP cyclohydrolase II AMD14_RS19570 PF00535 Glycosyl transferase family 2 AMD14_RS19585 PF01189 16S rRNA methyltransferase RsmB/F AMD14_RS19585 PF01029 NusB family AMD14_RS19590 PF02911 Formyl transferase, C-terminal domain AMD14_RS19590 PF00551 Formyl transferase AMD14_RS19595 PF01327 Polypeptide deformylase AMD14_RS19600 PF01476 LysM domain AMD14_RS19605 PF02481 DNA recombination-mediator protein A AMD14_RS19605 PF17782 DprA winged helix domain AMD14_RS19610 PF04361 Protein of unknown function (DUF494) AMD14_RS19615 PF00114 Pilin (bacterial filament) AMD14_RS19615 PF07963 Prokaryotic N-terminal methylation motif AMD14_RS19625 PF13368 Topoisomerase C-terminal repeat AMD14_RS19625 PF01131 DNA topoisomerase AMD14_RS19625 PF01751 Toprim domain AMD14_RS19630 PF01300 Telomere recombination AMD14_RS19655 PF01343 Peptidase family S49 AMD14_RS19660 PF01554 MatE AMD14_RS19680 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMD14_RS19680 PF00270 DEAD/DEAH box helicase AMD14_RS19680 PF00271 Helicase conserved C-terminal domain AMD14_RS19680 PF17764 3′ DNA-binding domain (3′BD) AMD14_RS19680 PF18074 Primosomal protein N C-terminal domain AMD14_RS19685 PF13417 Glutathione S-transferase, N-terminal domain AMD14_RS19685 PF00043 Glutathione S-transferase, C-terminal domain AMD14_RS19700 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD14_RS19705 PF03458 UPF0126 domain AMD14_RS19710 PF04542 Sigma-70 region 2 AMD14_RS19710 PF04545 Sigma-70, region 4 AMD14_RS19715 PF03167 Uracil DNA glycosylase superfamily AMD14_RS19720 PF00072 Response regulator receiver domain AMD14_RS19720 PF01339 CheB methylesterase AMD14_RS19725 PF18075 FtsX extracellular domain AMD14_RS19730 PF00005 ABC transporter AMD14_RS19735 PF00270 DEAD/DEAH box helicase AMD14_RS19735 PF00271 Helicase conserved C-terminal domain AMD14_RS19735 PF12300 ATP-dependent RNA helicase RhlB AMD14_RS19740 PF00085 Thioredoxin AMD14_RS19745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD14_RS19745 PF07498 Rho termination factor, N-terminal domain AMD14_RS19745 PF07497 Rho termination factor, RNA-binding domain AMD14_RS19750 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD14_RS19755 PF03466 LysR substrate binding domain AMD14_RS19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS19765 PF03971 Monomeric isocitrate dehydrogenase AMD14_RS19780 PF09704 CRISPR-associated protein (Cas_Cas5) AMD14_RS19800 PF01867 CRISPR associated protein Cas1 AMD14_RS19805 PF09827 CRISPR associated protein Cas2 AMD14_RS19815 PF01476 LysM domain AMD14_RS19815 PF04972 BON domain AMD14_RS19820 PF14489 QueF-like protein AMD14_RS19820 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD14_RS19825 PF01546 Peptidase family M20/M25/M40 AMD14_RS19825 PF07687 Peptidase dimerisation domain AMD14_RS19830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS19835 PF00873 AcrB/AcrD/AcrF family AMD14_RS19840 PF00873 AcrB/AcrD/AcrF family AMD14_RS19845 PF07063 Domain of unknown function (DUF1338) AMD14_RS19885 PF01427 D-ala-D-ala dipeptidase AMD14_RS19890 PF01510 N-acetylmuramoyl-L-alanine amidase AMD14_RS19900 PF13378 Enolase C-terminal domain-like AMD14_RS19900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD14_RS19910 PF13520 Amino acid permease AMD14_RS19925 PF05360 yiaA/B two helix domain AMD14_RS19930 PF07995 Glucose / Sorbosone dehydrogenase AMD14_RS19935 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD14_RS19935 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD14_RS19935 PF14310 Fibronectin type III-like domain AMD14_RS19940 PF02152 Dihydroneopterin aldolase AMD14_RS19945 PF00814 Glycoprotease family AMD14_RS19950 PF01165 Ribosomal protein S21 AMD14_RS19955 PF09424 Yqey-like protein AMD14_RS19960 PF03631 Virulence factor BrkB AMD14_RS19965 PF08278 DNA primase DnaG DnaB-binding AMD14_RS19965 PF01807 CHC2 zinc finger AMD14_RS19965 PF08275 DNA primase catalytic core, N-terminal domain AMD14_RS19965 PF10410 DnaB-helicase binding domain of primase AMD14_RS19970 PF13593 SBF-like CPA transporter family (DUF4137) AMD14_RS19980 PF01040 UbiA prenyltransferase family AMD14_RS20005 PF00510 Cytochrome c oxidase subunit III AMD14_RS20010 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD14_RS20015 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD14_RS20020 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMD14_RS20020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD14_RS20030 PF00171 Aldehyde dehydrogenase family AMD14_RS20030 PF14850 DNA-binding domain of Proline dehydrogenase AMD14_RS20030 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD14_RS20030 PF01619 Proline dehydrogenase AMD14_RS20065 PF00579 tRNA synthetases class I (W and Y) AMD14_RS20070 PF01551 Peptidase family M23 AMD14_RS20070 PF04225 Opacity-associated protein A LysM-like domain AMD14_RS20075 PF03702 Anhydro-N-acetylmuramic acid kinase AMD14_RS20085 PF07690 Major Facilitator Superfamily AMD14_RS20090 PF03372 Endonuclease/Exonuclease/phosphatase family AMD14_RS20095 PF00156 Phosphoribosyl transferase domain AMD14_RS20105 PF13614 AAA domain AMD14_RS20110 PF02195 ParB-like nuclease domain AMD14_RS20110 PF17762 HTH domain found in ParB protein AMD14_RS20120 PF01370 NAD dependent epimerase/dehydratase family AMD14_RS20125 PF00535 Glycosyl transferase family 2 AMD14_RS20140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD14_RS20140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD14_RS20140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD14_RS20140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD14_RS20145 PF00692 dUTPase AMD14_RS20150 PF02441 Flavoprotein AMD14_RS20150 PF04127 DNA / pantothenate metabolism flavoprotein AMD14_RS20155 PF04002 RadC-like JAB domain AMD14_RS20160 PF00750 tRNA synthetases class I (R) AMD14_RS20160 PF03485 Arginyl tRNA synthetase N terminal domain AMD14_RS20160 PF05746 DALR anticodon binding domain AMD14_RS20175 PF00106 short chain dehydrogenase AMD14_RS20180 PF01757 Acyltransferase family AMD14_RS20185 PF03033 Glycosyltransferase family 28 N-terminal domain AMD14_RS20190 PF00550 Phosphopantetheine attachment site AMD14_RS20190 PF00668 Condensation domain AMD14_RS20190 PF00975 Thioesterase domain AMD14_RS20190 PF00501 AMP-binding enzyme AMD14_RS20190 PF13193 AMP-binding enzyme C-terminal domain AMD14_RS20200 PF17944 Arginine decarboxylase C-terminal helical extension AMD14_RS20200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD14_RS20200 PF17810 Arginine decarboxylase helical bundle domain AMD14_RS20205 PF17284 Spermidine synthase tetramerisation domain AMD14_RS20235 PF00543 Nitrogen regulatory protein P-II AMD14_RS20240 PF04380 Membrane fusogenic activity AMD14_RS20245 PF01078 Magnesium chelatase, subunit ChlI AMD14_RS20245 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMD14_RS20260 PF12792 CSS motif domain associated with EAL AMD14_RS20260 PF00563 EAL domain AMD14_RS20265 PF00487 Fatty acid desaturase AMD14_RS20270 PF00970 Oxidoreductase FAD-binding domain AMD14_RS20270 PF00175 Oxidoreductase NAD-binding domain AMD14_RS20270 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD14_RS20275 PF00440 Bacterial regulatory proteins, tetR family AMD14_RS20295 PF01139 tRNA-splicing ligase RtcB AMD14_RS20335 PF01370 NAD dependent epimerase/dehydratase family AMD14_RS20335 PF08338 Domain of unknown function (DUF1731) AMD14_RS20340 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS20340 PF00072 Response regulator receiver domain AMD14_RS20345 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS20345 PF08521 Two-component sensor kinase N-terminal AMD14_RS20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS20365 PF00595 PDZ domain AMD14_RS20385 PF01594 AI-2E family transporter AMD14_RS20390 PF13419 Haloacid dehalogenase-like hydrolase AMD14_RS20395 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD14_RS20395 PF00883 Cytosol aminopeptidase family, catalytic domain AMD14_RS20405 PF04542 Sigma-70 region 2 AMD14_RS20405 PF08281 Sigma-70, region 4 AMD14_RS20410 PF00199 Catalase AMD14_RS20425 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS20425 PF00072 Response regulator receiver domain AMD14_RS20430 PF07730 Histidine kinase AMD14_RS20435 PF13533 Biotin-lipoyl like AMD14_RS20440 PF00005 ABC transporter AMD14_RS20465 PF00892 EamA-like transporter family AMD14_RS20480 PF00753 Metallo-beta-lactamase superfamily AMD14_RS20485 PF00579 tRNA synthetases class I (W and Y) AMD14_RS20490 PF05532 CsbD-like AMD14_RS20505 PF00491 Arginase family AMD14_RS20530 PF02223 Thymidylate kinase AMD14_RS20545 PF03309 Type III pantothenate kinase AMD14_RS20550 PF02237 Biotin protein ligase C terminal domain AMD14_RS20550 PF08279 HTH domain AMD14_RS20550 PF03099 Biotin/lipoate A/B protein ligase family AMD14_RS20560 PF06167 Glucose-regulated metallo-peptidase M90 AMD14_RS20575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS20580 PF00486 Transcriptional regulatory protein, C terminal AMD14_RS20580 PF00072 Response regulator receiver domain AMD14_RS20590 PF01207 Dihydrouridine synthase (Dus) AMD14_RS20610 PF13307 Helicase C-terminal domain AMD14_RS20610 PF06733 DEAD_2 AMD14_RS20625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMD14_RS20625 PF01488 Shikimate / quinate 5-dehydrogenase AMD14_RS20625 PF08501 Shikimate dehydrogenase substrate binding domain AMD14_RS20635 PF00175 Oxidoreductase NAD-binding domain AMD14_RS20635 PF00258 Flavodoxin AMD14_RS20635 PF00667 FAD binding domain AMD14_RS20645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS20645 PF03466 LysR substrate binding domain AMD14_RS20655 PF00490 Delta-aminolevulinic acid dehydratase AMD14_RS20680 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD14_RS20680 PF00326 Prolyl oligopeptidase family AMD14_RS20685 PF00043 Glutathione S-transferase, C-terminal domain AMD14_RS20685 PF02798 Glutathione S-transferase, N-terminal domain AMD14_RS20710 PF04820 Tryptophan halogenase AMD14_RS20725 PF00005 ABC transporter AMD14_RS20735 PF01381 Helix-turn-helix AMD14_RS20745 PF01229 Glycosyl hydrolases family 39 AMD14_RS20750 PF02583 Metal-sensitive transcriptional repressor AMD14_RS20755 PF16916 Dimerisation domain of Zinc Transporter AMD14_RS20755 PF01545 Cation efflux family AMD14_RS20765 PF00593 TonB dependent receptor AMD14_RS20765 PF07715 TonB-dependent Receptor Plug Domain AMD14_RS20775 PF01965 DJ-1/PfpI family AMD14_RS20775 PF12833 Helix-turn-helix domain AMD14_RS20780 PF00970 Oxidoreductase FAD-binding domain AMD14_RS20780 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD14_RS20780 PF00175 Oxidoreductase NAD-binding domain AMD14_RS20785 PF00005 ABC transporter AMD14_RS20790 PF01061 ABC-2 type transporter AMD14_RS20800 PF02558 Ketopantoate reductase PanE/ApbA AMD14_RS20800 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD14_RS20830 PF00268 Ribonucleotide reductase, small chain AMD14_RS20835 PF02867 Ribonucleotide reductase, barrel domain AMD14_RS20835 PF00317 Ribonucleotide reductase, all-alpha domain AMD14_RS20835 PF03477 ATP cone domain AMD14_RS20845 PF00583 Acetyltransferase (GNAT) family AMD14_RS20845 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD14_RS20845 PF13380 CoA binding domain AMD14_RS20850 PF03448 MgtE intracellular N domain AMD14_RS20850 PF01769 Divalent cation transporter AMD14_RS20850 PF00571 CBS domain AMD14_RS20855 PF00194 Eukaryotic-type carbonic anhydrase AMD14_RS20860 PF02254 TrkA-N domain AMD14_RS20860 PF00999 Sodium/hydrogen exchanger family AMD14_RS20865 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD14_RS20865 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD14_RS20870 PF00723 Glycosyl hydrolases family 15 AMD14_RS20885 PF05166 YcgL domain AMD14_RS20890 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD14_RS20890 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD14_RS20900 PF00535 Glycosyl transferase family 2 AMD14_RS20955 PF07977 FabA-like domain AMD14_RS20960 PF01553 Acyltransferase AMD14_RS20970 PF00550 Phosphopantetheine attachment site AMD14_RS20975 PF04820 Tryptophan halogenase AMD14_RS20995 PF00326 Prolyl oligopeptidase family AMD14_RS20995 PF07676 WD40-like Beta Propeller Repeat AMD14_RS21010 PF01218 Coproporphyrinogen III oxidase AMD14_RS21015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD14_RS21015 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD14_RS21015 PF01612 3'-5' exonuclease AMD14_RS21015 PF00476 DNA polymerase family A AMD14_RS21025 PF06812 ImpA, N-terminal, type VI secretion system AMD14_RS21045 PF03793 PASTA domain AMD14_RS21045 PF00069 Protein kinase domain AMD14_RS21060 PF06761 Intracellular multiplication and human macrophage-killing AMD14_RS21060 PF06744 Type VI secretion protein IcmF C-terminal AMD14_RS21060 PF14331 ImcF-related N-terminal domain AMD14_RS21070 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AMD14_RS21085 PF04717 Type VI secretion system, phage-baseplate injector AMD14_RS21100 PF03793 PASTA domain AMD14_RS21100 PF00069 Protein kinase domain AMD14_RS21110 PF04542 Sigma-70 region 2 AMD14_RS21110 PF08281 Sigma-70, region 4 AMD14_RS21125 PF00328 Histidine phosphatase superfamily (branch 2) AMD14_RS21155 PF07724 AAA domain (Cdc48 subfamily) AMD14_RS21155 PF00004 ATPase family associated with various cellular activities (AAA) AMD14_RS21155 PF10431 C-terminal, D2-small domain, of ClpB protein AMD14_RS21155 PF17871 AAA lid domain AMD14_RS21165 PF05947 Type VI secretion system, TssF AMD14_RS21170 PF04965 Gene 25-like lysozyme AMD14_RS21175 PF07024 ImpE protein AMD14_RS21180 PF05638 Type VI secretion system effector, Hcp AMD14_RS21185 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMD14_RS21190 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AMD14_RS21205 PF12464 Maltose acetyltransferase AMD14_RS21205 PF14602 Hexapeptide repeat of succinyl-transferase AMD14_RS21210 PF13361 UvrD-like helicase C-terminal domain AMD14_RS21210 PF00580 UvrD/REP helicase N-terminal domain AMD14_RS21225 PF13396 Phospholipase_D-nuclease N-terminal AMD14_RS21225 PF13091 PLD-like domain AMD14_RS21230 PF03466 LysR substrate binding domain AMD14_RS21230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS21235 PF03737 Aldolase/RraA AMD14_RS21240 PF04303 PrpF protein AMD14_RS21245 PF04909 Amidohydrolase AMD14_RS21250 PF00471 Ribosomal protein L33 AMD14_RS21255 PF00830 Ribosomal L28 family AMD14_RS21260 PF00873 AcrB/AcrD/AcrF family AMD14_RS21265 PF13533 Biotin-lipoyl like AMD14_RS21285 PF02527 rRNA small subunit methyltransferase G AMD14_RS21290 PF16655 PhoD-like phosphatase, N-terminal domain AMD14_RS21290 PF09423 PhoD-like phosphatase AMD14_RS21295 PF16655 PhoD-like phosphatase, N-terminal domain AMD14_RS21295 PF09423 PhoD-like phosphatase AMD14_RS21300 PF01648 4'-phosphopantetheinyl transferase superfamily AMD14_RS21310 PF04226 Transglycosylase associated protein AMD14_RS21320 PF03372 Endonuclease/Exonuclease/phosphatase family AMD14_RS21325 PF00480 ROK family AMD14_RS21335 PF09312 SurA N-terminal domain AMD14_RS21345 PF00474 Sodium:solute symporter family AMD14_RS21350 PF04341 Protein of unknown function, DUF485 AMD14_RS21360 PF16177 Acetyl-coenzyme A synthetase N-terminus AMD14_RS21360 PF00501 AMP-binding enzyme AMD14_RS21360 PF13193 AMP-binding enzyme C-terminal domain AMD14_RS21365 PF00072 Response regulator receiver domain AMD14_RS21365 PF00196 Bacterial regulatory proteins, luxR family AMD14_RS21390 PF04616 Glycosyl hydrolases family 43 AMD14_RS21390 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD14_RS21400 PF00248 Aldo/keto reductase family AMD14_RS21415 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD14_RS21420 PF13378 Enolase C-terminal domain-like AMD14_RS21420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD14_RS21430 PF05336 L-rhamnose mutarotase AMD14_RS21435 PF07690 Major Facilitator Superfamily AMD14_RS21440 PF09339 IclR helix-turn-helix domain AMD14_RS21440 PF01614 Bacterial transcriptional regulator AMD14_RS21445 PF02659 Putative manganese efflux pump AMD14_RS21450 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS21450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS21465 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AMD14_RS21465 PF06165 Glycosyltransferase family 36 AMD14_RS21480 PF13570 PQQ-like domain AMD14_RS21480 PF01011 PQQ enzyme repeat AMD14_RS21480 PF13360 PQQ-like domain AMD14_RS21500 PF04357 TamB, inner membrane protein subunit of TAM complex AMD14_RS21505 PF17243 POTRA domain TamA domain 1 AMD14_RS21505 PF01103 Surface antigen AMD14_RS21535 PF00005 ABC transporter AMD14_RS21535 PF03412 Peptidase C39 family AMD14_RS21535 PF00664 ABC transporter transmembrane region AMD14_RS21540 PF05746 DALR anticodon binding domain AMD14_RS21540 PF02092 Glycyl-tRNA synthetase beta subunit AMD14_RS21545 PF02091 Glycyl-tRNA synthetase alpha subunit AMD14_RS21550 PF00437 Type II/IV secretion system protein AMD14_RS21550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD14_RS21560 PF00958 GMP synthase C terminal domain AMD14_RS21560 PF00117 Glutamine amidotransferase class-I AMD14_RS21570 PF00902 Sec-independent protein translocase protein (TatC) AMD14_RS21575 PF02416 mttA/Hcf106 family AMD14_RS21580 PF02416 mttA/Hcf106 family AMD14_RS21590 PF00762 Ferrochelatase AMD14_RS21595 PF12697 Alpha/beta hydrolase family AMD14_RS21610 PF04381 Putative exonuclease, RdgC AMD14_RS21615 PF01171 PP-loop family AMD14_RS21625 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS21630 PF03648 Glycosyl hydrolase family 67 N-terminus AMD14_RS21630 PF07488 Glycosyl hydrolase family 67 middle domain AMD14_RS21630 PF07477 Glycosyl hydrolase family 67 C-terminus AMD14_RS21640 PF13378 Enolase C-terminal domain-like AMD14_RS21640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD14_RS21645 PF04616 Glycosyl hydrolases family 43 AMD14_RS21645 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD14_RS21650 PF14310 Fibronectin type III-like domain AMD14_RS21650 PF07691 PA14 domain AMD14_RS21650 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD14_RS21650 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD14_RS21655 PF01232 Mannitol dehydrogenase Rossmann domain AMD14_RS21655 PF08125 Mannitol dehydrogenase C-terminal domain AMD14_RS21680 PF00171 Aldehyde dehydrogenase family AMD14_RS21705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD14_RS21705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD14_RS21730 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD14_RS21735 PF00331 Glycosyl hydrolase family 10 AMD14_RS21740 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD14_RS21740 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD14_RS21740 PF00703 Glycosyl hydrolases family 2 AMD14_RS21740 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD14_RS21740 PF16355 Domain of unknown function (DUF4982) AMD14_RS21745 PF02614 Glucuronate isomerase AMD14_RS21750 PF00553 Cellulose binding domain AMD14_RS21750 PF00331 Glycosyl hydrolase family 10 AMD14_RS21750 PF03422 Carbohydrate binding module (family 6) AMD14_RS21765 PF00553 Cellulose binding domain AMD14_RS21765 PF00331 Glycosyl hydrolase family 10 AMD14_RS21765 PF03422 Carbohydrate binding module (family 6) AMD14_RS21785 PF04616 Glycosyl hydrolases family 43 AMD14_RS21820 PF00550 Phosphopantetheine attachment site AMD14_RS21820 PF14765 Polyketide synthase dehydratase AMD14_RS21820 PF08659 KR domain AMD14_RS21820 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD14_RS21820 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD14_RS21820 PF00698 Acyl transferase domain AMD14_RS21820 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS21820 PF00107 Zinc-binding dehydrogenase AMD14_RS21820 PF16197 Ketoacyl-synthetase C-terminal extension AMD14_RS21825 PF01553 Acyltransferase AMD14_RS21835 PF00356 Bacterial regulatory proteins, lacI family AMD14_RS21855 PF04820 Tryptophan halogenase AMD14_RS21860 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD14_RS21865 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD14_RS21870 PF04337 Protein of unknown function, DUF480 AMD14_RS21885 PF00580 UvrD/REP helicase N-terminal domain AMD14_RS21885 PF13361 UvrD-like helicase C-terminal domain AMD14_RS21890 PF00265 Thymidine kinase AMD14_RS21895 PF00512 His Kinase A (phospho-acceptor) domain AMD14_RS21895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD14_RS21895 PF08446 PAS fold AMD14_RS21895 PF01590 GAF domain AMD14_RS21895 PF00360 Phytochrome region AMD14_RS21900 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD14_RS21910 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD14_RS21910 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD14_RS21910 PF06827 Zinc finger found in FPG and IleRS AMD14_RS21945 PF03594 Benzoate membrane transport protein AMD14_RS21950 PF08446 PAS fold AMD14_RS21950 PF13426 PAS domain AMD14_RS21950 PF01590 GAF domain AMD14_RS21950 PF00360 Phytochrome region AMD14_RS21955 PF01126 Heme oxygenase AMD14_RS21960 PF07690 Major Facilitator Superfamily AMD14_RS21965 PF01263 Aldose 1-epimerase AMD14_RS21975 PF02810 SEC-C motif AMD14_RS21980 PF01925 Sulfite exporter TauE/SafE AMD14_RS22000 PF01227 GTP cyclohydrolase I AMD14_RS22010 PF07869 Protein of unknown function (DUF1656) AMD14_RS22015 PF00529 HlyD membrane-fusion protein of T1SS AMD14_RS22015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD14_RS22020 PF02321 Outer membrane efflux protein AMD14_RS22025 PF04632 Fusaric acid resistance protein family AMD14_RS22030 PF00083 Sugar (and other) transporter AMD14_RS22035 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD14_RS22040 PF13396 Phospholipase_D-nuclease N-terminal AMD14_RS22040 PF13091 PLD-like domain AMD14_RS22065 PF01850 PIN domain AMD14_RS22090 PF00849 RNA pseudouridylate synthase AMD14_RS22125 PF02785 Biotin carboxylase C-terminal domain AMD14_RS22125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD14_RS22125 PF00289 Biotin carboxylase, N-terminal domain AMD14_RS22130 PF01425 Amidase AMD14_RS22160 PF13538 UvrD-like helicase C-terminal domain AMD14_RS22165 PF00580 UvrD/REP helicase N-terminal domain AMD14_RS22165 PF13361 UvrD-like helicase C-terminal domain AMD14_RS22165 PF12705 PD-(D/E)XK nuclease superfamily AMD14_RS22170 PF17946 RecC C-terminal domain AMD14_RS22185 PF00005 ABC transporter AMD14_RS22190 PF02405 Permease MlaE AMD14_RS22195 PF02470 MlaD protein AMD14_RS22200 PF05494 MlaC protein AMD14_RS22210 PF04333 MlaA lipoprotein AMD14_RS22220 PF00255 Glutathione peroxidase AMD14_RS22230 PF02646 RmuC family AMD14_RS22235 PF08240 Alcohol dehydrogenase GroES-like domain AMD14_RS22235 PF00107 Zinc-binding dehydrogenase AMD14_RS22240 PF03466 LysR substrate binding domain AMD14_RS22240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD14_RS22250 PF13417 Glutathione S-transferase, N-terminal domain AMD14_RS22250 PF00043 Glutathione S-transferase, C-terminal domain AMD14_RS22260 PF13520 Amino acid permease AMD14_RS22265 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD14_RS22265 PF07971 Glycosyl hydrolase family 92 AMD14_RS22270 PF10947 Protein of unknown function (DUF2628) AMD14_RS22275 PF00990 Diguanylate cyclase, GGDEF domain AMD14_RS22280 PF05651 Putative sugar diacid recognition AMD14_RS22280 PF13556 PucR C-terminal helix-turn-helix domain AMD14_RS22280 PF17853 GGDEF-like domain AMD14_RS22285 PF02595 Glycerate kinase family AMD14_RS22290 PF07690 Major Facilitator Superfamily AMD14_RS22305 PF10672 S-adenosylmethionine-dependent methyltransferase AMD14_RS22305 PF17785 PUA-like domain AMD14_RS22310 PF03741 Integral membrane protein TerC family AMD14_RS22315 PF01694 Rhomboid family AMD14_RS22320 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD14_RS22330 PF01569 PAP2 superfamily AMD14_RS22335 PF01926 50S ribosome-binding GTPase AMD14_RS22335 PF12631 MnmE helical domain AMD14_RS22335 PF10396 GTP-binding protein TrmE N-terminus AMD14_RS22340 PF01522 Polysaccharide deacetylase AMD14_RS22350 PF02096 60Kd inner membrane protein AMD14_RS22350 PF14849 YidC periplasmic domain AMD14_RS22355 PF00825 Ribonuclease P AMD14_RS22360 PF00468 Ribosomal protein L34