AMD13_RS00010 PF00308 Bacterial dnaA protein AMD13_RS00020 PF02767 DNA polymerase III beta subunit, central domain AMD13_RS00045 PF00204 DNA gyrase B AMD13_RS00045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS00095 PF13091 PLD-like domain AMD13_RS00200 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) AMD13_RS00240 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD13_RS00295 PF00150 Cellulase (glycosyl hydrolase family 5) AMD13_RS00340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD13_RS00355 PF00310 Glutamine amidotransferases class-II AMD13_RS00355 PF01645 Conserved region in glutamate synthase AMD13_RS00355 PF04898 Glutamate synthase central domain AMD13_RS00365 PF00310 Glutamine amidotransferases class-II AMD13_RS00435 PF13727 CoA-binding domain AMD13_RS00455 PF00733 Asparagine synthase AMD13_RS00465 PF00733 Asparagine synthase AMD13_RS00485 PF00308 Bacterial dnaA protein AMD13_RS00485 PF08299 Bacterial dnaA protein helix-turn-helix AMD13_RS00485 PF11638 DnaA N-terminal domain AMD13_RS00490 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD13_RS00490 PF02767 DNA polymerase III beta subunit, central domain AMD13_RS00490 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD13_RS00495 PF02463 RecF/RecN/SMC N terminal domain AMD13_RS00500 PF00204 DNA gyrase B AMD13_RS00500 PF00986 DNA gyrase B subunit, carboxyl terminus AMD13_RS00500 PF01751 Toprim domain AMD13_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS00505 PF02517 CAAX protease self-immunity AMD13_RS00510 PF01435 Peptidase family M48 AMD13_RS00515 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) AMD13_RS00520 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS00525 PF01618 AMD13_RS00525 AMD13_RS00530 PF02472 Biopolymer transport protein ExbD/TolR AMD13_RS00535 PF02472 Biopolymer transport protein ExbD/TolR AMD13_RS00540 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD13_RS00550 PF13091 PLD-like domain AMD13_RS00565 PF04055 Radical SAM superfamily AMD13_RS00570 PF13640 2OG-Fe(II) oxygenase superfamily AMD13_RS00575 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD13_RS00580 PF01694 Rhomboid family AMD13_RS00585 PF08850 AMD13_RS00585 AMD13_RS00590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD13_RS00590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD13_RS00595 PF03572 Peptidase family S41 AMD13_RS00595 PF13180 PDZ domain AMD13_RS00600 PF01551 Peptidase family M23 AMD13_RS00610 PF04389 Peptidase family M28 AMD13_RS00615 PF13670 AMD13_RS00615 AMD13_RS00620 PF00150 Cellulase (glycosyl hydrolase family 5) AMD13_RS00625 PF00150 Cellulase (glycosyl hydrolase family 5) AMD13_RS00630 PF00150 Cellulase (glycosyl hydrolase family 5) AMD13_RS00635 PF00107 Zinc-binding dehydrogenase AMD13_RS00635 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS00640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS00640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD13_RS00645 PF00310 Glutamine amidotransferases class-II AMD13_RS00645 PF01493 GXGXG motif AMD13_RS00645 PF01645 Conserved region in glutamate synthase AMD13_RS00645 PF04898 Glutamate synthase central domain AMD13_RS00650 PF11720 Peptidase inhibitor I78 family AMD13_RS00655 PF01028 Eukaryotic DNA topoisomerase I, catalytic core AMD13_RS00670 PF05368 NmrA-like family AMD13_RS00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS00675 PF03466 LysR substrate binding domain AMD13_RS00680 PF00534 Glycosyl transferases group 1 AMD13_RS00680 PF13439 Glycosyltransferase Family 4 AMD13_RS00685 PF00534 Glycosyl transferases group 1 AMD13_RS00685 PF13439 Glycosyltransferase Family 4 AMD13_RS00690 PF02397 AMD13_RS00690 AMD13_RS00690 PF13727 CoA-binding domain AMD13_RS00695 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD13_RS00700 PF04932 AMD13_RS00700 AMD13_RS00705 PF03808 AMD13_RS00705 AMD13_RS00710 PF13439 Glycosyltransferase Family 4 AMD13_RS00710 PF13692 Glycosyl transferases group 1 AMD13_RS00725 PF13489 Methyltransferase domain AMD13_RS00730 PF00733 Asparagine synthase AMD13_RS00730 PF13537 Glutamine amidotransferase domain AMD13_RS00740 PF05711 Macrocin-O-methyltransferase (TylF) AMD13_RS00745 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS00755 PF01943 AMD13_RS00755 AMD13_RS00755 PF14667 Polysaccharide biosynthesis C-terminal domain AMD13_RS00760 PF00005 ABC transporter AMD13_RS00760 PF00664 ABC transporter transmembrane region AMD13_RS00765 PF13471 AMD13_RS00765 AMD13_RS00775 PF00733 Asparagine synthase AMD13_RS00775 PF13537 Glutamine amidotransferase domain AMD13_RS00780 PF13847 Methyltransferase domain AMD13_RS00785 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD13_RS00795 PF00685 Sulfotransferase domain AMD13_RS00800 PF13673 Acetyltransferase (GNAT) domain AMD13_RS00805 PF07484 Phage Tail Collar Domain AMD13_RS00810 PF07484 Phage Tail Collar Domain AMD13_RS00815 PF07484 Phage Tail Collar Domain AMD13_RS00820 PF14907 Uncharacterised nucleotidyltransferase AMD13_RS00825 PF03965 Penicillinase repressor AMD13_RS00830 PF05569 BlaR1 peptidase M56 AMD13_RS00840 PF03435 Saccharopine dehydrogenase AMD13_RS00845 PF08975 Domain of unknown function (DUF1868) AMD13_RS00850 PF00593 TonB dependent receptor AMD13_RS00850 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS00855 PF00480 ROK family AMD13_RS00860 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD13_RS00865 PF13482 RNase_H superfamily AMD13_RS00870 PF00270 DEAD/DEAH box helicase AMD13_RS00870 PF00271 Helicase conserved C-terminal domain AMD13_RS00870 PF09369 AMD13_RS00870 AMD13_RS00875 PF03006 AMD13_RS00875 AMD13_RS00880 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD13_RS00885 PF05016 Plasmid stabilisation system protein AMD13_RS00890 PF00106 short chain dehydrogenase AMD13_RS00895 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS00900 PF03466 LysR substrate binding domain AMD13_RS00905 PF14305 AMD13_RS00905 AMD13_RS00915 PF02525 Flavodoxin-like fold AMD13_RS00920 PF01527 Transposase AMD13_RS00930 PF13333 AMD13_RS00930 AMD13_RS00940 PF01609 Transposase DDE domain AMD13_RS00975 PF05532 CsbD-like AMD13_RS00980 PF08668 HDOD domain AMD13_RS00985 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD13_RS00995 PF01447 Thermolysin metallopeptidase, catalytic domain AMD13_RS00995 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD13_RS01000 PF13460 NADH(P)-binding AMD13_RS01005 PF00293 NUDIX domain AMD13_RS01010 PF01435 Peptidase family M48 AMD13_RS01020 PF10116 AMD13_RS01020 AMD13_RS01025 PF00085 Thioredoxin AMD13_RS01035 PF00083 Sugar (and other) transporter AMD13_RS01040 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AMD13_RS01045 PF12787 AMD13_RS01045 AMD13_RS01050 PF06080 AMD13_RS01050 AMD13_RS01065 PF07584 AMD13_RS01065 AMD13_RS01070 PF01882 AMD13_RS01070 AMD13_RS01075 PF07726 ATPase family associated with various cellular activities (AAA) AMD13_RS01080 PF13709 Domain of unknown function (DUF4159) AMD13_RS01085 PF01523 Putative modulator of DNA gyrase AMD13_RS01090 PF01523 Putative modulator of DNA gyrase AMD13_RS01095 PF01523 Putative modulator of DNA gyrase AMD13_RS01105 PF00316 Fructose-1-6-bisphosphatase AMD13_RS01110 PF00155 Aminotransferase class I and II AMD13_RS01115 PF00593 TonB dependent receptor AMD13_RS01115 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS01125 PF07883 Cupin domain AMD13_RS01130 PF00171 Aldehyde dehydrogenase family AMD13_RS01135 PF05610 AMD13_RS01135 AMD13_RS01150 PF02735 Ku70/Ku80 beta-barrel domain AMD13_RS01155 PF01070 FMN-dependent dehydrogenase AMD13_RS01165 PF00144 Beta-lactamase AMD13_RS01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS01170 PF07730 Histidine kinase AMD13_RS01175 PF00072 Response regulator receiver domain AMD13_RS01175 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS01195 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS01195 PF13191 AAA ATPase domain AMD13_RS01200 PF07055 Enoyl reductase FAD binding domain AMD13_RS01200 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD13_RS01200 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD13_RS01210 PF00294 pfkB family carbohydrate kinase AMD13_RS01215 PF00593 TonB dependent receptor AMD13_RS01215 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS01220 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD13_RS01235 PF13619 AMD13_RS01235 AMD13_RS01240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMD13_RS01245 PF01609 Transposase DDE domain AMD13_RS01265 PF01527 Transposase AMD13_RS01270 PF00665 Integrase core domain AMD13_RS01270 PF13276 AMD13_RS01270 AMD13_RS01275 PF00128 Alpha amylase, catalytic domain AMD13_RS01275 PF11896 Domain of unknown function (DUF3416) AMD13_RS01280 PF00128 Alpha amylase, catalytic domain AMD13_RS01280 PF16657 AMD13_RS01280 AMD13_RS01285 PF00128 Alpha amylase, catalytic domain AMD13_RS01285 PF02806 Alpha amylase, C-terminal all-beta domain AMD13_RS01285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD13_RS01290 PF12850 Calcineurin-like phosphoesterase superfamily domain AMD13_RS01295 PF00248 Aldo/keto reductase family AMD13_RS01300 PF00135 Carboxylesterase family AMD13_RS01305 PF07859 alpha/beta hydrolase fold AMD13_RS01315 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD13_RS01320 PF04290 AMD13_RS01320 AMD13_RS01325 PF06808 AMD13_RS01325 AMD13_RS01330 PF04616 Glycosyl hydrolases family 43 AMD13_RS01335 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS01335 PF13377 Periplasmic binding protein-like domain AMD13_RS01340 PF04962 KduI/IolB family AMD13_RS01345 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS01350 PF02502 Ribose/Galactose Isomerase AMD13_RS01350 PF12408 Ribose-5-phosphate isomerase AMD13_RS01355 PF07883 Cupin domain AMD13_RS01355 PF13472 GDSL-like Lipase/Acylhydrolase family AMD13_RS01360 PF05299 M61 glycyl aminopeptidase AMD13_RS01365 PF14300 Domain of unknown function (DUF4375) AMD13_RS01370 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD13_RS01375 PF01037 AsnC family AMD13_RS01375 PF13404 AsnC-type helix-turn-helix domain AMD13_RS01380 PF00593 TonB dependent receptor AMD13_RS01380 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS01385 PF01734 Patatin-like phospholipase AMD13_RS01390 PF01987 Mitochondrial biogenesis AIM24 AMD13_RS01395 PF00005 ABC transporter AMD13_RS01400 PF00487 AMD13_RS01400 AMD13_RS01405 PF13202 EF hand AMD13_RS01410 PF00005 ABC transporter AMD13_RS01415 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS01415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMD13_RS01420 PF00266 Aminotransferase class-V AMD13_RS01425 PF03781 Sulfatase-modifying factor enzyme 1 AMD13_RS01425 PF12867 DinB superfamily AMD13_RS01430 PF10017 AMD13_RS01430 AMD13_RS01435 PF11625 Protein of unknown function (DUF3253) AMD13_RS01440 PF07805 HipA-like N-terminal domain AMD13_RS01440 PF13657 HipA N-terminal domain AMD13_RS01445 PF13560 Helix-turn-helix domain AMD13_RS01450 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMD13_RS01460 PF03547 AMD13_RS01460 AMD13_RS01470 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD13_RS01475 PF00300 Histidine phosphatase superfamily (branch 1) AMD13_RS01480 PF04264 YceI-like domain AMD13_RS01485 PF13091 PLD-like domain AMD13_RS01490 PF03061 Thioesterase superfamily AMD13_RS01495 PF01553 Acyltransferase AMD13_RS01500 PF12146 Putative lysophospholipase AMD13_RS01510 PF13432 Tetratricopeptide repeat AMD13_RS01515 PF01161 Phosphatidylethanolamine-binding protein AMD13_RS01520 PF00107 Zinc-binding dehydrogenase AMD13_RS01520 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS01525 PF03724 META domain AMD13_RS01525 PF14302 AMD13_RS01525 AMD13_RS01530 PF02673 AMD13_RS01530 AMD13_RS01535 PF00120 Glutamine synthetase, catalytic domain AMD13_RS01535 PF03951 Glutamine synthetase, beta-Grasp domain AMD13_RS01540 PF00543 Nitrogen regulatory protein P-II AMD13_RS01545 PF00909 Ammonium Transporter Family AMD13_RS01550 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS01555 PF00072 Response regulator receiver domain AMD13_RS01555 PF00158 Sigma-54 interaction domain AMD13_RS01555 PF02954 Bacterial regulatory protein, Fis family AMD13_RS01560 PF00080 Copper/zinc superoxide dismutase (SODC) AMD13_RS01565 PF00080 Copper/zinc superoxide dismutase (SODC) AMD13_RS01570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS01580 PF00108 Thiolase, N-terminal domain AMD13_RS01580 PF02803 Thiolase, C-terminal domain AMD13_RS01585 PF07219 AMD13_RS01585 AMD13_RS01590 PF04375 AMD13_RS01590 AMD13_RS01595 PF02602 Uroporphyrinogen-III synthase HemD AMD13_RS01600 PF01755 AMD13_RS01600 AMD13_RS01605 PF09500 Putative thioesterase (yiiD_Cterm) AMD13_RS01615 PF00581 Rhodanese-like domain AMD13_RS01620 PF02556 Preprotein translocase subunit SecB AMD13_RS01625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD13_RS01625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD13_RS01630 PF13505 Outer membrane protein beta-barrel domain AMD13_RS01635 PF00205 Thiamine pyrophosphate enzyme, central domain AMD13_RS01635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD13_RS01635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD13_RS01640 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS01645 PF00072 Response regulator receiver domain AMD13_RS01645 PF00158 Sigma-54 interaction domain AMD13_RS01645 PF02954 Bacterial regulatory protein, Fis family AMD13_RS01660 PF07690 Major Facilitator Superfamily AMD13_RS01665 PF00588 SpoU rRNA Methylase family AMD13_RS01675 PF13698 AMD13_RS01675 AMD13_RS01680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD13_RS01680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD13_RS01685 PF02661 Fic/DOC family AMD13_RS01685 PF13784 Fic/DOC family N-terminal AMD13_RS01690 PF00561 alpha/beta hydrolase fold AMD13_RS01695 PF03692 AMD13_RS01695 AMD13_RS01700 PF00501 AMP-binding enzyme AMD13_RS01705 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD13_RS01710 PF07043 AMD13_RS01710 AMD13_RS01720 PF01820 D-ala D-ala ligase N-terminus AMD13_RS01725 PF02036 SCP-2 sterol transfer family AMD13_RS01730 PF03109 AMD13_RS01730 AMD13_RS01735 PF07883 Cupin domain AMD13_RS01740 PF00849 RNA pseudouridylate synthase AMD13_RS01745 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) AMD13_RS01750 PF00472 RF-1 domain AMD13_RS01755 PF01553 Acyltransferase AMD13_RS01760 PF01112 Asparaginase AMD13_RS01765 PF01432 Peptidase family M3 AMD13_RS01770 PF12706 Beta-lactamase superfamily domain AMD13_RS01780 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS01780 PF14246 AefR-like transcriptional repressor, C-terminal region AMD13_RS01785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS01790 PF12833 Helix-turn-helix domain AMD13_RS01795 PF00999 Sodium/hydrogen exchanger family AMD13_RS01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS01800 PF03466 LysR substrate binding domain AMD13_RS01805 PF01274 Malate synthase AMD13_RS01810 PF00463 Isocitrate lyase family AMD13_RS01815 PF00027 Cyclic nucleotide-binding domain AMD13_RS01815 PF00990 GGDEF domain AMD13_RS01835 PF00326 Prolyl oligopeptidase family AMD13_RS01840 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD13_RS01840 PF00364 Biotin-requiring enzyme AMD13_RS01840 PF02785 Biotin carboxylase C-terminal domain AMD13_RS01840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD13_RS01845 PF01039 Carboxyl transferase domain AMD13_RS01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS01850 PF02770 Acyl-CoA dehydrogenase, middle domain AMD13_RS01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD13_RS01855 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS01865 PF08808 AMD13_RS01865 AMD13_RS01870 PF11804 AMD13_RS01870 AMD13_RS01875 PF03929 AMD13_RS01875 AMD13_RS01880 PF12365 AMD13_RS01880 AMD13_RS01890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD13_RS01895 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS01900 PF03203 AMD13_RS01900 AMD13_RS01905 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD13_RS01905 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD13_RS01925 PF12146 Putative lysophospholipase AMD13_RS01930 PF03969 AFG1-like ATPase AMD13_RS01935 PF01047 MarR family AMD13_RS01940 PF02566 OsmC-like protein AMD13_RS01950 PF12697 Alpha/beta hydrolase family AMD13_RS01955 PF11101 AMD13_RS01955 AMD13_RS01970 PF00107 Zinc-binding dehydrogenase AMD13_RS01970 PF16884 AMD13_RS01970 AMD13_RS01975 PF00248 Aldo/keto reductase family AMD13_RS01985 PF00849 RNA pseudouridylate synthase AMD13_RS01990 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS01990 PF13620 Carboxypeptidase regulatory-like domain AMD13_RS02000 PF00271 Helicase conserved C-terminal domain AMD13_RS02000 PF04408 Helicase associated domain (HA2) AMD13_RS02000 PF08482 AMD13_RS02000 AMD13_RS02010 PF07308 AMD13_RS02010 AMD13_RS02015 PF00576 HIUase/Transthyretin family AMD13_RS02020 PF13738 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS02025 PF09349 OHCU decarboxylase AMD13_RS02030 PF11533 Protein of unknown function (DUF3225) AMD13_RS02035 PF01522 Polysaccharide deacetylase AMD13_RS02040 PF00266 Aminotransferase class-V AMD13_RS02045 PF01546 Peptidase family M20/M25/M40 AMD13_RS02045 PF07687 Peptidase dimerisation domain AMD13_RS02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS02050 PF03466 LysR substrate binding domain AMD13_RS02055 PF07690 Major Facilitator Superfamily AMD13_RS02065 PF01019 Gamma-glutamyltranspeptidase AMD13_RS02070 PF01425 Amidase AMD13_RS02075 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD13_RS02080 PF00962 Adenosine/AMP deaminase AMD13_RS02085 PF00860 Permease family AMD13_RS02095 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD13_RS02095 PF00970 Oxidoreductase FAD-binding domain AMD13_RS02100 PF00355 Rieske [2Fe-2S] domain AMD13_RS02105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS02105 PF03466 LysR substrate binding domain AMD13_RS02110 PF01026 TatD related DNase AMD13_RS02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS02125 PF03466 LysR substrate binding domain AMD13_RS02130 PF07690 Major Facilitator Superfamily AMD13_RS02135 PF13411 MerR HTH family regulatory protein AMD13_RS02140 PF12697 Alpha/beta hydrolase family AMD13_RS02145 PF02146 Sir2 family AMD13_RS02150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD13_RS02155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD13_RS02155 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD13_RS02165 PF00551 Formyl transferase AMD13_RS02165 PF01842 ACT domain AMD13_RS02170 PF00072 Response regulator receiver domain AMD13_RS02170 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS02175 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS02175 PF00672 HAMP domain AMD13_RS02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS02180 PF16576 AMD13_RS02180 AMD13_RS02185 PF00873 AcrB/AcrD/AcrF family AMD13_RS02190 PF02321 Outer membrane efflux protein AMD13_RS02200 PF02219 Methylenetetrahydrofolate reductase AMD13_RS02205 PF02677 AMD13_RS02205 AMD13_RS02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS02210 PF03466 LysR substrate binding domain AMD13_RS02215 PF03358 NADPH-dependent FMN reductase AMD13_RS02220 PF08908 AMD13_RS02220 AMD13_RS02225 PF01717 Cobalamin-independent synthase, Catalytic domain AMD13_RS02230 PF03812 AMD13_RS02230 AMD13_RS02235 PF07396 Phosphate-selective porin O and P AMD13_RS02240 PF05368 NmrA-like family AMD13_RS02245 PF01638 HxlR-like helix-turn-helix AMD13_RS02270 PF00665 Integrase core domain AMD13_RS02270 PF13276 AMD13_RS02270 AMD13_RS02275 PF01527 Transposase AMD13_RS02280 PF00589 Phage integrase family AMD13_RS02285 PF00920 Dehydratase family AMD13_RS02290 PF00150 Cellulase (glycosyl hydrolase family 5) AMD13_RS02305 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS02315 PF07690 Major Facilitator Superfamily AMD13_RS02320 PF11871 AMD13_RS02320 AMD13_RS02320 PF13487 HD domain AMD13_RS02325 PF12802 MarR family AMD13_RS02330 PF13557 AMD13_RS02330 AMD13_RS02335 PF00106 short chain dehydrogenase AMD13_RS02335 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS02340 PF00171 Aldehyde dehydrogenase family AMD13_RS02345 PF02311 AraC-like ligand binding domain AMD13_RS02345 PF12833 Helix-turn-helix domain AMD13_RS02350 PF01494 FAD binding domain AMD13_RS02355 PF12680 SnoaL-like domain AMD13_RS02360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD13_RS02360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD13_RS02365 PF00230 Major intrinsic protein AMD13_RS02370 PF01266 FAD dependent oxidoreductase AMD13_RS02370 PF16901 AMD13_RS02370 AMD13_RS02375 PF00455 AMD13_RS02375 AMD13_RS02375 PF08220 DeoR-like helix-turn-helix domain AMD13_RS02380 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD13_RS02380 PF00175 Oxidoreductase NAD-binding domain AMD13_RS02380 PF00970 Oxidoreductase FAD-binding domain AMD13_RS02385 PF00355 Rieske [2Fe-2S] domain AMD13_RS02390 PF01144 Coenzyme A transferase AMD13_RS02395 PF01144 Coenzyme A transferase AMD13_RS02400 PF00108 Thiolase, N-terminal domain AMD13_RS02400 PF02803 Thiolase, C-terminal domain AMD13_RS02405 PF00775 Dioxygenase AMD13_RS02405 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD13_RS02410 PF00775 Dioxygenase AMD13_RS02415 PF00206 Lyase AMD13_RS02415 PF10397 Adenylosuccinate lyase C-terminus AMD13_RS02420 PF00561 alpha/beta hydrolase fold AMD13_RS02425 PF02627 Carboxymuconolactone decarboxylase family AMD13_RS02430 PF12146 Putative lysophospholipase AMD13_RS02435 PF01614 Bacterial transcriptional regulator AMD13_RS02435 PF09339 IclR helix-turn-helix domain AMD13_RS02440 PF01163 RIO1 family AMD13_RS02445 PF07859 alpha/beta hydrolase fold AMD13_RS02450 PF10677 AMD13_RS02450 AMD13_RS02455 PF01134 Glucose inhibited division protein A AMD13_RS02455 PF13932 GidA associated domain 3 AMD13_RS02465 PF00291 Pyridoxal-phosphate dependent enzyme AMD13_RS02470 PF02698 DUF218 domain AMD13_RS02475 PF12680 SnoaL-like domain AMD13_RS02480 PF05118 Aspartyl/Asparaginyl beta-hydroxylase AMD13_RS02485 PF08241 Methyltransferase domain AMD13_RS02490 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS02495 PF12697 Alpha/beta hydrolase family AMD13_RS02505 PF00155 Aminotransferase class I and II AMD13_RS02510 PF04055 Radical SAM superfamily AMD13_RS02510 PF06968 Biotin and Thiamin Synthesis associated domain AMD13_RS02515 PF00156 Phosphoribosyl transferase domain AMD13_RS02520 PF01040 UbiA prenyltransferase family AMD13_RS02535 PF05819 AMD13_RS02535 AMD13_RS02545 PF05932 Tir chaperone protein (CesT) family AMD13_RS02570 PF01313 AMD13_RS02570 AMD13_RS02575 PF00813 AMD13_RS02575 AMD13_RS02580 PF01052 Surface presentation of antigens (SPOA) AMD13_RS02585 PF09483 AMD13_RS02585 AMD13_RS02590 PF00771 FHIPEP family AMD13_RS02595 PF01312 FlhB HrpN YscU SpaS Family AMD13_RS02600 PF09613 AMD13_RS02600 AMD13_RS02605 PF09487 AMD13_RS02605 AMD13_RS02610 PF01514 Secretory protein of YscJ/FliF family AMD13_RS02615 PF09502 AMD13_RS02615 AMD13_RS02620 PF02108 AMD13_RS02620 AMD13_RS02625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD13_RS02625 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD13_RS02630 PF09486 AMD13_RS02630 AMD13_RS02635 PF01311 AMD13_RS02635 AMD13_RS02640 PF00263 AMD13_RS02640 AMD13_RS02640 PF03958 Bacterial type II/III secretion system short domain AMD13_RS02650 PF01464 Transglycosylase SLT domain AMD13_RS02660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD13_RS02665 PF00924 Mechanosensitive ion channel AMD13_RS02665 PF12607 AMD13_RS02665 AMD13_RS02670 PF00884 Sulfatase AMD13_RS02675 PF03109 AMD13_RS02675 AMD13_RS02680 PF05661 AMD13_RS02680 AMD13_RS02685 PF00990 GGDEF domain AMD13_RS02690 PF00534 Glycosyl transferases group 1 AMD13_RS02690 PF08323 Starch synthase catalytic domain AMD13_RS02695 PF00128 Alpha amylase, catalytic domain AMD13_RS02695 PF02806 Alpha amylase, C-terminal all-beta domain AMD13_RS02695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD13_RS02700 PF00128 Alpha amylase, catalytic domain AMD13_RS02700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD13_RS02700 PF11941 Domain of unknown function (DUF3459) AMD13_RS02705 PF02446 4-alpha-glucanotransferase AMD13_RS02710 PF00128 Alpha amylase, catalytic domain AMD13_RS02715 PF11154 AMD13_RS02715 AMD13_RS02720 PF00128 Alpha amylase, catalytic domain AMD13_RS02720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD13_RS02725 PF13460 NADH(P)-binding AMD13_RS02730 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS02735 PF00890 FAD binding domain AMD13_RS02735 PF13454 FAD-NAD(P)-binding AMD13_RS02745 PF06903 AMD13_RS02745 AMD13_RS02750 PF02321 Outer membrane efflux protein AMD13_RS02755 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS02760 PF16576 AMD13_RS02760 AMD13_RS02765 PF00873 AcrB/AcrD/AcrF family AMD13_RS02770 PF00106 short chain dehydrogenase AMD13_RS02780 PF00270 DEAD/DEAH box helicase AMD13_RS02780 PF00271 Helicase conserved C-terminal domain AMD13_RS02785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD13_RS02785 PF00364 Biotin-requiring enzyme AMD13_RS02785 PF02817 e3 binding domain AMD13_RS02790 PF07653 Variant SH3 domain AMD13_RS02795 PF02779 Transketolase, pyrimidine binding domain AMD13_RS02795 PF02780 Transketolase, C-terminal domain AMD13_RS02800 PF00676 Dehydrogenase E1 component AMD13_RS02805 PF00932 Lamin Tail Domain AMD13_RS02805 PF03160 Calx-beta domain AMD13_RS02805 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS02810 PF03301 Tryptophan 2,3-dioxygenase AMD13_RS02815 PF00854 POT family AMD13_RS02820 PF13899 Thioredoxin-like AMD13_RS02825 PF12802 MarR family AMD13_RS02830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS02830 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AMD13_RS02835 PF04209 homogentisate 1,2-dioxygenase AMD13_RS02850 PF03334 AMD13_RS02850 AMD13_RS02855 PF04066 AMD13_RS02855 AMD13_RS02860 PF01899 AMD13_RS02860 AMD13_RS02865 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD13_RS02870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD13_RS02875 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD13_RS02875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD13_RS02875 PF04039 AMD13_RS02875 AMD13_RS02875 PF13244 AMD13_RS02875 AMD13_RS02880 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS02885 PF06127 AMD13_RS02885 AMD13_RS02890 PF01447 Thermolysin metallopeptidase, catalytic domain AMD13_RS02890 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD13_RS02890 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD13_RS02900 PF00182 Chitinase class I AMD13_RS02900 PF01471 Putative peptidoglycan binding domain AMD13_RS02900 PF01551 Peptidase family M23 AMD13_RS02920 PF01259 SAICAR synthetase AMD13_RS02925 PF00226 DnaJ domain AMD13_RS02930 PF13505 Outer membrane protein beta-barrel domain AMD13_RS02935 PF00834 Ribulose-phosphate 3 epimerase family AMD13_RS02940 PF00583 Acetyltransferase (GNAT) family AMD13_RS02945 PF00781 Diacylglycerol kinase catalytic domain AMD13_RS02950 PF00425 chorismate binding enzyme AMD13_RS02950 PF04715 Anthranilate synthase component I, N terminal region AMD13_RS02955 PF01212 Beta-eliminating lyase AMD13_RS02960 PF00117 Glutamine amidotransferase class-I AMD13_RS02965 PF01613 Flavin reductase like domain AMD13_RS02970 PF00591 Glycosyl transferase family, a/b domain AMD13_RS02970 PF02885 Glycosyl transferase family, helical bundle domain AMD13_RS02975 PF00218 Indole-3-glycerol phosphate synthase AMD13_RS02980 PF12710 haloacid dehalogenase-like hydrolase AMD13_RS02985 PF00027 Cyclic nucleotide-binding domain AMD13_RS02985 PF00325 Bacterial regulatory proteins, crp family AMD13_RS02990 PF02675 S-adenosylmethionine decarboxylase AMD13_RS02995 PF00893 Small Multidrug Resistance protein AMD13_RS03000 PF03232 AMD13_RS03000 AMD13_RS03005 PF00572 Ribosomal protein L13 AMD13_RS03010 PF00380 Ribosomal protein S9/S16 AMD13_RS03025 PF00293 NUDIX domain AMD13_RS03030 PF04324 BFD-like [2Fe-2S] binding domain AMD13_RS03035 PF00210 Ferritin-like domain AMD13_RS03040 PF00072 Response regulator receiver domain AMD13_RS03040 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS03040 PF01627 Hpt domain AMD13_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS03045 PF00072 Response regulator receiver domain AMD13_RS03045 PF00563 EAL domain AMD13_RS03045 PF00990 GGDEF domain AMD13_RS03050 PF13548 AMD13_RS03050 AMD13_RS03060 PF04519 AMD13_RS03060 AMD13_RS03065 PF01521 Iron-sulphur cluster biosynthesis AMD13_RS03075 PF03583 Secretory lipase AMD13_RS03080 PF01609 Transposase DDE domain AMD13_RS03085 PF00293 NUDIX domain AMD13_RS03085 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD13_RS03085 PF09297 NADH pyrophosphatase zinc ribbon domain AMD13_RS03090 PF03186 AMD13_RS03090 AMD13_RS03095 PF10825 AMD13_RS03095 AMD13_RS03100 PF04505 AMD13_RS03100 AMD13_RS03110 PF01553 Acyltransferase AMD13_RS03110 PF07690 Major Facilitator Superfamily AMD13_RS03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS03115 PF03466 LysR substrate binding domain AMD13_RS03120 PF07690 Major Facilitator Superfamily AMD13_RS03125 PF12805 AMD13_RS03125 AMD13_RS03125 PF13515 AMD13_RS03125 AMD13_RS03135 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD13_RS03135 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD13_RS03135 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD13_RS03145 PF01808 AICARFT/IMPCHase bienzyme AMD13_RS03145 PF02142 MGS-like domain AMD13_RS03150 PF01066 CDP-alcohol phosphatidyltransferase AMD13_RS03155 PF12146 Putative lysophospholipase AMD13_RS03155 PF12147 AMD13_RS03155 AMD13_RS03160 PF00782 Dual specificity phosphatase, catalytic domain AMD13_RS03175 PF01066 CDP-alcohol phosphatidyltransferase AMD13_RS03180 PF01553 Acyltransferase AMD13_RS03185 PF01148 Cytidylyltransferase family AMD13_RS03190 PF02954 Bacterial regulatory protein, Fis family AMD13_RS03195 PF11906 AMD13_RS03195 AMD13_RS03205 PF01381 Helix-turn-helix AMD13_RS03215 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AMD13_RS03230 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD13_RS03230 PF02785 Biotin carboxylase C-terminal domain AMD13_RS03230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD13_RS03235 PF05635 23S rRNA-intervening sequence protein AMD13_RS03240 PF00364 Biotin-requiring enzyme AMD13_RS03245 PF01220 Dehydroquinase class II AMD13_RS03250 PF02683 AMD13_RS03250 AMD13_RS03250 PF11412 Disulphide bond corrector protein DsbC AMD13_RS03250 PF13899 Thioredoxin-like AMD13_RS03255 PF03091 CutA1 divalent ion tolerance protein AMD13_RS03260 PF12625 AMD13_RS03260 AMD13_RS03260 PF12833 Helix-turn-helix domain AMD13_RS03270 PF01852 START domain AMD13_RS03280 PF00106 short chain dehydrogenase AMD13_RS03285 PF00932 Lamin Tail Domain AMD13_RS03285 PF04231 Endonuclease I AMD13_RS03285 PF13205 Bacterial Ig-like domain AMD13_RS03290 PF00166 Chaperonin 10 Kd subunit AMD13_RS03295 PF00118 TCP-1/cpn60 chaperonin family AMD13_RS03305 PF00593 TonB dependent receptor AMD13_RS03305 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS03310 PF00793 DAHP synthetase I family AMD13_RS03325 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD13_RS03335 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD13_RS03335 PF08335 GlnD PII-uridylyltransferase AMD13_RS03340 PF02592 AMD13_RS03340 AMD13_RS03350 PF00082 Subtilase family AMD13_RS03350 PF09286 Pro-kumamolisin, activation domain AMD13_RS03355 PF06258 AMD13_RS03355 AMD13_RS03360 PF00881 Nitroreductase family AMD13_RS03365 PF04264 YceI-like domain AMD13_RS03375 PF00328 Histidine phosphatase superfamily (branch 2) AMD13_RS03380 PF04954 Siderophore-interacting protein AMD13_RS03380 PF08021 Siderophore-interacting FAD-binding domain AMD13_RS03385 PF03551 Transcriptional regulator PadR-like family AMD13_RS03390 PF16957 AMD13_RS03390 AMD13_RS03395 PF06857 AMD13_RS03395 AMD13_RS03400 PF01039 Carboxyl transferase domain AMD13_RS03405 PF06833 Malonate decarboxylase gamma subunit (MdcE) AMD13_RS03410 PF10620 AMD13_RS03410 AMD13_RS03415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD13_RS03420 PF00698 Acyl transferase domain AMD13_RS03425 PF03600 Citrate transporter AMD13_RS03425 PF07158 AMD13_RS03425 AMD13_RS03430 PF00392 Bacterial regulatory proteins, gntR family AMD13_RS03430 PF07729 FCD domain AMD13_RS03435 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS03440 PF01740 STAS domain AMD13_RS03445 PF13581 Histidine kinase-like ATPase domain AMD13_RS03450 PF00672 HAMP domain AMD13_RS03450 PF02743 Cache domain AMD13_RS03450 PF07228 Stage II sporulation protein E (SpoIIE) AMD13_RS03460 PF01764 Lipase (class 3) AMD13_RS03465 PF07745 Glycosyl hydrolase family 53 AMD13_RS03470 PF00456 Transketolase, thiamine diphosphate binding domain AMD13_RS03475 PF00665 Integrase core domain AMD13_RS03475 PF13276 AMD13_RS03475 AMD13_RS03480 PF01527 Transposase AMD13_RS03485 PF00106 short chain dehydrogenase AMD13_RS03490 PF12833 Helix-turn-helix domain AMD13_RS03490 PF12852 Cupin AMD13_RS03500 PF00106 short chain dehydrogenase AMD13_RS03500 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS03505 PF01145 SPFH domain / Band 7 family AMD13_RS03510 PF13409 Glutathione S-transferase, N-terminal domain AMD13_RS03510 PF13410 Glutathione S-transferase, C-terminal domain AMD13_RS03515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS03520 PF13548 AMD13_RS03520 AMD13_RS03530 PF05708 Orthopoxvirus protein of unknown function (DUF830) AMD13_RS03535 PF12823 AMD13_RS03535 AMD13_RS03540 PF00326 Prolyl oligopeptidase family AMD13_RS03540 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD13_RS03545 PF07759 AMD13_RS03545 AMD13_RS03555 PF00990 GGDEF domain AMD13_RS03575 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMD13_RS03580 PF00892 EamA-like transporter family AMD13_RS03585 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD13_RS03595 PF00324 Amino acid permease AMD13_RS03605 PF01544 CorA-like Mg2+ transporter protein AMD13_RS03610 PF01987 Mitochondrial biogenesis AIM24 AMD13_RS03615 PF01204 Trehalase AMD13_RS03620 PF01904 Protein of unknown function DUF72 AMD13_RS03625 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD13_RS03625 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD13_RS03645 PF00675 Insulinase (Peptidase family M16) AMD13_RS03645 PF05193 Peptidase M16 inactive domain AMD13_RS03650 PF00990 GGDEF domain AMD13_RS03650 PF01590 GAF domain AMD13_RS03650 PF08447 PAS fold AMD13_RS03650 PF08448 PAS fold AMD13_RS03655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS03655 PF00672 HAMP domain AMD13_RS03655 PF17200 AMD13_RS03655 AMD13_RS03660 PF00150 Cellulase (glycosyl hydrolase family 5) AMD13_RS03660 PF00553 Cellulose binding domain AMD13_RS03665 PF00916 AMD13_RS03665 AMD13_RS03665 PF01740 STAS domain AMD13_RS03670 PF00990 GGDEF domain AMD13_RS03675 PF02225 PA domain AMD13_RS03675 PF04389 Peptidase family M28 AMD13_RS03685 PF13632 Glycosyl transferase family group 2 AMD13_RS03690 PF02230 Phospholipase/Carboxylesterase AMD13_RS03695 PF06580 AMD13_RS03695 AMD13_RS03700 PF00072 Response regulator receiver domain AMD13_RS03700 PF04397 LytTr DNA-binding domain AMD13_RS03705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD13_RS03705 PF03900 Porphobilinogen deaminase, C-terminal domain AMD13_RS03710 PF04338 Protein of unknown function, DUF481 AMD13_RS03715 PF08279 HTH domain AMD13_RS03715 PF13280 AMD13_RS03715 AMD13_RS03720 PF08212 Lipocalin-like domain AMD13_RS03730 PF00326 Prolyl oligopeptidase family AMD13_RS03730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD13_RS03740 PF00155 Aminotransferase class I and II AMD13_RS03745 PF00326 Prolyl oligopeptidase family AMD13_RS03745 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD13_RS03750 PF04304 AMD13_RS03750 AMD13_RS03755 PF13627 AMD13_RS03755 AMD13_RS03760 PF01678 Diaminopimelate epimerase AMD13_RS03765 PF04340 Protein of unknown function, DUF484 AMD13_RS03770 PF00589 Phage integrase family AMD13_RS03770 PF02899 Phage integrase, N-terminal SAM-like domain AMD13_RS03775 PF00227 Proteasome subunit AMD13_RS03780 PF00004 ATPase family associated with various cellular activities (AAA) AMD13_RS03780 PF07724 AAA domain (Cdc48 subfamily) AMD13_RS03780 PF10431 C-terminal, D2-small domain, of ClpB protein AMD13_RS03785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD13_RS03790 PF13673 Acetyltransferase (GNAT) domain AMD13_RS03795 PF16576 AMD13_RS03795 AMD13_RS03800 PF07690 Major Facilitator Superfamily AMD13_RS03805 PF01209 ubiE/COQ5 methyltransferase family AMD13_RS03810 PF00672 HAMP domain AMD13_RS03810 PF00990 GGDEF domain AMD13_RS03815 PF01433 Peptidase family M1 AMD13_RS03815 PF09127 Leukotriene A4 hydrolase, C-terminal AMD13_RS03830 PF00702 haloacid dehalogenase-like hydrolase AMD13_RS03835 PF13360 PQQ-like domain AMD13_RS03835 PF13570 PQQ-like domain AMD13_RS03840 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD13_RS03840 PF12796 Ankyrin repeats (3 copies) AMD13_RS03840 PF13857 Ankyrin repeats (many copies) AMD13_RS03845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD13_RS03850 PF10282 Lactonase, 7-bladed beta-propeller AMD13_RS03855 PF00107 Zinc-binding dehydrogenase AMD13_RS03855 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS03860 PF00593 TonB dependent receptor AMD13_RS03860 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS03865 PF00158 Sigma-54 interaction domain AMD13_RS03865 PF02954 Bacterial regulatory protein, Fis family AMD13_RS03870 PF00294 pfkB family carbohydrate kinase AMD13_RS03875 PF06723 MreB/Mbl protein AMD13_RS03880 PF04085 rod shape-determining protein MreC AMD13_RS03885 PF04093 AMD13_RS03885 AMD13_RS03890 PF00905 Penicillin binding protein transpeptidase domain AMD13_RS03890 PF03717 Penicillin-binding Protein dimerisation domain AMD13_RS03895 PF01098 AMD13_RS03895 AMD13_RS03900 PF00295 Glycosyl hydrolases family 28 AMD13_RS03905 PF13406 Transglycosylase SLT domain AMD13_RS03910 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AMD13_RS03910 PF05036 Sporulation related domain AMD13_RS03920 PF00768 D-alanyl-D-alanine carboxypeptidase AMD13_RS03920 PF07943 Penicillin-binding protein 5, C-terminal domain AMD13_RS03925 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) AMD13_RS03930 PF04359 Protein of unknown function (DUF493) AMD13_RS03935 PF03099 Biotin/lipoate A/B protein ligase family AMD13_RS03940 PF04055 Radical SAM superfamily AMD13_RS03940 PF16881 AMD13_RS03940 AMD13_RS03945 PF00595 PDZ domain (Also known as DHR or GLGF) AMD13_RS03945 PF03572 Peptidase family S41 AMD13_RS03945 PF11818 AMD13_RS03945 AMD13_RS03950 PF01925 AMD13_RS03950 AMD13_RS03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS03955 PF03466 LysR substrate binding domain AMD13_RS03960 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS03965 PF00293 NUDIX domain AMD13_RS03965 PF01467 Cytidylyltransferase AMD13_RS03970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD13_RS03980 PF01555 DNA methylase AMD13_RS03985 PF10001 AMD13_RS03985 AMD13_RS03990 PF05433 AMD13_RS03990 AMD13_RS04000 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD13_RS04000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD13_RS04005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD13_RS04005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD13_RS04010 PF04972 BON domain AMD13_RS04015 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS04015 PF05227 CHASE3 domain AMD13_RS04015 PF13188 PAS domain AMD13_RS04020 PF00072 Response regulator receiver domain AMD13_RS04025 PF00072 Response regulator receiver domain AMD13_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS04030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD13_RS04035 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS04040 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AMD13_RS04045 PF04892 AMD13_RS04045 AMD13_RS04050 PF00593 TonB dependent receptor AMD13_RS04050 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS04055 PF13640 2OG-Fe(II) oxygenase superfamily AMD13_RS04065 PF00593 TonB dependent receptor AMD13_RS04065 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS04070 PF11356 Type IV pilus biogenesis AMD13_RS04070 PF13180 PDZ domain AMD13_RS04075 PF00263 AMD13_RS04075 AMD13_RS04075 PF03958 Bacterial type II/III secretion system short domain AMD13_RS04080 PF00437 Type II/IV secretion system protein AMD13_RS04085 PF00482 Type II secretion system (T2SS), protein F AMD13_RS04090 PF08334 Type II secretion system (T2SS), protein G AMD13_RS04090 PF13544 AMD13_RS04090 AMD13_RS04095 PF12019 Type II transport protein GspH AMD13_RS04100 PF02501 Type II secretion system (T2SS), protein I AMD13_RS04100 PF13633 Prokaryotic N-terminal methylation site AMD13_RS04105 PF11612 Type II secretion system (T2SS), protein J AMD13_RS04105 PF13544 AMD13_RS04105 AMD13_RS04110 PF03934 Type II secretion system (T2SS), protein K AMD13_RS04115 PF05134 Type II secretion system (T2SS), protein L AMD13_RS04115 PF12693 GspL periplasmic domain AMD13_RS04120 PF04612 Type II secretion system (T2SS), protein M AMD13_RS04125 PF01203 AMD13_RS04125 AMD13_RS04130 PF00593 TonB dependent receptor AMD13_RS04130 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS04140 PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain AMD13_RS04140 PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain AMD13_RS04140 PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain AMD13_RS04145 PF07786 AMD13_RS04145 AMD13_RS04150 PF00392 Bacterial regulatory proteins, gntR family AMD13_RS04150 PF07702 UTRA domain AMD13_RS04155 PF07690 Major Facilitator Superfamily AMD13_RS04160 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS04160 PF13377 Periplasmic binding protein-like domain AMD13_RS04165 PF01380 SIS domain AMD13_RS04170 PF01979 Amidohydrolase family AMD13_RS04175 PF00593 TonB dependent receptor AMD13_RS04175 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS04180 PF01743 Poly A polymerase head domain AMD13_RS04180 PF01966 HD domain AMD13_RS04180 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD13_RS04185 PF00732 GMC oxidoreductase AMD13_RS04185 PF05199 GMC oxidoreductase AMD13_RS04190 PF00171 Aldehyde dehydrogenase family AMD13_RS04195 PF02028 BCCT family transporter AMD13_RS04200 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS04205 PF01323 DSBA-like thioredoxin domain AMD13_RS04210 PF13462 Thioredoxin AMD13_RS04215 PF00034 Cytochrome c AMD13_RS04220 PF01926 50S ribosome-binding GTPase AMD13_RS04225 PF00753 Metallo-beta-lactamase superfamily AMD13_RS04230 PF12833 Helix-turn-helix domain AMD13_RS04235 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD13_RS04240 PF00672 HAMP domain AMD13_RS04240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS04245 PF00072 Response regulator receiver domain AMD13_RS04245 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS04250 PF00534 Glycosyl transferases group 1 AMD13_RS04260 PF02583 Metal-sensitive transcriptional repressor AMD13_RS04265 PF00107 Zinc-binding dehydrogenase AMD13_RS04265 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS04270 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD13_RS04275 PF00756 Putative esterase AMD13_RS04285 PF00155 Aminotransferase class I and II AMD13_RS04285 PF00392 Bacterial regulatory proteins, gntR family AMD13_RS04290 PF02567 Phenazine biosynthesis-like protein AMD13_RS04295 PF00892 EamA-like transporter family AMD13_RS04305 PF00005 ABC transporter AMD13_RS04305 PF12848 ABC transporter AMD13_RS04310 PF11776 Domain of unknown function (DUF3315) AMD13_RS04315 PF00464 Serine hydroxymethyltransferase AMD13_RS04320 PF03477 ATP cone domain AMD13_RS04325 PF00583 Acetyltransferase (GNAT) family AMD13_RS04330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD13_RS04330 PF01872 RibD C-terminal domain AMD13_RS04340 PF00677 Lumazine binding domain AMD13_RS04345 PF00925 GTP cyclohydrolase II AMD13_RS04345 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD13_RS04350 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD13_RS04355 PF01029 NusB family AMD13_RS04360 PF00586 AIR synthase related protein, N-terminal domain AMD13_RS04360 PF02769 AIR synthase related protein, C-terminal domain AMD13_RS04365 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD13_RS04365 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD13_RS04370 PF00646 F-box domain AMD13_RS04375 PF09604 AMD13_RS04375 AMD13_RS04380 PF03814 AMD13_RS04380 AMD13_RS04385 PF00122 E1-E2 ATPase AMD13_RS04385 PF00702 haloacid dehalogenase-like hydrolase AMD13_RS04390 PF02669 AMD13_RS04390 AMD13_RS04395 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS04395 PF00582 Universal stress protein family AMD13_RS04395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS04395 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD13_RS04395 PF13493 Domain of unknown function (DUF4118) AMD13_RS04400 PF00072 Response regulator receiver domain AMD13_RS04400 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS04415 PF01565 FAD binding domain AMD13_RS04415 PF02913 FAD linked oxidases, C-terminal domain AMD13_RS04420 PF04307 AMD13_RS04420 AMD13_RS04425 PF02021 Uncharacterised protein family UPF0102 AMD13_RS04430 PF04348 LppC putative lipoprotein AMD13_RS04435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD13_RS04440 PF07362 Post-segregation antitoxin CcdA AMD13_RS04445 PF05742 AMD13_RS04445 AMD13_RS04450 PF02381 MraZ protein AMD13_RS04455 PF01795 MraW methylase family AMD13_RS04460 PF04999 AMD13_RS04460 AMD13_RS04465 PF00905 Penicillin binding protein transpeptidase domain AMD13_RS04465 PF03717 Penicillin-binding Protein dimerisation domain AMD13_RS04470 PF01225 Mur ligase family, catalytic domain AMD13_RS04470 PF02875 Mur ligase family, glutamate ligase domain AMD13_RS04470 PF08245 Mur ligase middle domain AMD13_RS04475 PF01225 Mur ligase family, catalytic domain AMD13_RS04475 PF02875 Mur ligase family, glutamate ligase domain AMD13_RS04475 PF08245 Mur ligase middle domain AMD13_RS04480 PF00953 Glycosyl transferase family 4 AMD13_RS04485 PF01098 AMD13_RS04485 AMD13_RS04490 PF03033 Glycosyltransferase family 28 N-terminal domain AMD13_RS04490 PF04101 Glycosyltransferase family 28 C-terminal domain AMD13_RS04495 PF01225 Mur ligase family, catalytic domain AMD13_RS04495 PF02875 Mur ligase family, glutamate ligase domain AMD13_RS04495 PF08245 Mur ligase middle domain AMD13_RS04500 PF01820 D-ala D-ala ligase N-terminus AMD13_RS04500 PF07478 D-ala D-ala ligase C-terminus AMD13_RS04505 PF03799 Cell division protein FtsQ AMD13_RS04505 PF08478 POTRA domain, FtsQ-type AMD13_RS04510 PF02491 SHS2 domain inserted in FTSA AMD13_RS04510 PF14450 Cell division protein FtsA AMD13_RS04515 PF00091 Tubulin/FtsZ family, GTPase domain AMD13_RS04515 PF12327 FtsZ family, C-terminal domain AMD13_RS04520 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD13_RS04525 PF05258 AMD13_RS04525 AMD13_RS04530 PF01551 Peptidase family M23 AMD13_RS04535 PF01043 SecA preprotein cross-linking domain AMD13_RS04535 PF02810 SEC-C motif AMD13_RS04535 PF07516 SecA Wing and Scaffold domain AMD13_RS04535 PF07517 SecA DEAD-like domain AMD13_RS04540 PF00293 NUDIX domain AMD13_RS04540 PF02581 Thiamine monophosphate synthase/TENI AMD13_RS04550 PF02219 Methylenetetrahydrofolate reductase AMD13_RS04555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD13_RS04560 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS04560 PF13602 Zinc-binding dehydrogenase AMD13_RS04565 PF00082 Subtilase family AMD13_RS04565 PF09286 Pro-kumamolisin, activation domain AMD13_RS04575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD13_RS04580 PF00128 Alpha amylase, catalytic domain AMD13_RS04590 PF09831 AMD13_RS04590 AMD13_RS04595 PF11539 Protein of unknown function (DUF3228) AMD13_RS04605 PF00685 Sulfotransferase domain AMD13_RS04610 PF13649 Methyltransferase domain AMD13_RS04615 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD13_RS04615 PF05221 S-adenosyl-L-homocysteine hydrolase AMD13_RS04620 PF00326 Prolyl oligopeptidase family AMD13_RS04625 PF00311 Phosphoenolpyruvate carboxylase AMD13_RS04630 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS04635 PF13387 AMD13_RS04635 AMD13_RS04650 PF00593 TonB dependent receptor AMD13_RS04650 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS04655 PF00328 Histidine phosphatase superfamily (branch 2) AMD13_RS04660 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD13_RS04660 PF02772 S-adenosylmethionine synthetase, central domain AMD13_RS04660 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD13_RS04665 PF04307 AMD13_RS04665 AMD13_RS04670 PF08241 Methyltransferase domain AMD13_RS04675 PF01207 Dihydrouridine synthase (Dus) AMD13_RS04680 PF08306 Glycosyl hydrolase family 98 AMD13_RS04680 PF08307 Glycosyl hydrolase family 98 C-terminal domain AMD13_RS04680 PF16990 AMD13_RS04680 AMD13_RS04685 PF00294 pfkB family carbohydrate kinase AMD13_RS04690 PF01773 Na+ dependent nucleoside transporter N-terminus AMD13_RS04690 PF07662 Na+ dependent nucleoside transporter C-terminus AMD13_RS04690 PF07670 Nucleoside recognition AMD13_RS04695 PF00248 Aldo/keto reductase family AMD13_RS04700 PF10636 Hemin uptake protein hemP AMD13_RS04705 PF00593 TonB dependent receptor AMD13_RS04705 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS04720 PF04342 AMD13_RS04720 AMD13_RS04725 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS04730 PF00005 ABC transporter AMD13_RS04735 PF13379 NMT1-like family AMD13_RS04740 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD13_RS04745 PF02687 AMD13_RS04745 AMD13_RS04750 PF00005 ABC transporter AMD13_RS04755 PF13472 GDSL-like Lipase/Acylhydrolase family AMD13_RS04760 PF00072 Response regulator receiver domain AMD13_RS04760 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS04765 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS04765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS04770 PF13472 GDSL-like Lipase/Acylhydrolase family AMD13_RS04775 PF01219 Prokaryotic diacylglycerol kinase AMD13_RS04780 PF04011 LemA family AMD13_RS04785 PF04536 TLP18 AMD13_RS04790 PF04536 TLP18 AMD13_RS04795 PF01790 AMD13_RS04795 AMD13_RS04800 PF00303 Thymidylate synthase AMD13_RS04810 PF00186 Dihydrofolate reductase AMD13_RS04815 PF00158 Sigma-54 interaction domain AMD13_RS04820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD13_RS04820 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS04825 PF00005 ABC transporter AMD13_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS04835 PF09084 NMT1/THI5 like AMD13_RS04840 PF00296 Luciferase-like monooxygenase AMD13_RS04845 PF03358 NADPH-dependent FMN reductase AMD13_RS04850 PF00593 TonB dependent receptor AMD13_RS04850 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS04860 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS04865 PF00296 Luciferase-like monooxygenase AMD13_RS04870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD13_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS04885 PF00005 ABC transporter AMD13_RS04885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD13_RS04890 PF00149 Calcineurin-like phosphoesterase AMD13_RS04895 PF04379 Protein of unknown function (DUF525) AMD13_RS04900 PF00398 Ribosomal RNA adenine dimethylase AMD13_RS04905 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD13_RS04910 PF00639 PPIC-type PPIASE domain AMD13_RS04910 PF09312 SurA N-terminal domain AMD13_RS04910 PF13616 PPIC-type PPIASE domain AMD13_RS04915 PF03968 OstA-like protein AMD13_RS04915 PF04453 Organic solvent tolerance protein AMD13_RS04920 PF00850 Histone deacetylase domain AMD13_RS04925 PF00850 Histone deacetylase domain AMD13_RS04930 PF01923 Cobalamin adenosyltransferase AMD13_RS04940 PF01494 FAD binding domain AMD13_RS04945 PF01494 FAD binding domain AMD13_RS04950 PF12697 Alpha/beta hydrolase family AMD13_RS04955 PF13577 SnoaL-like domain AMD13_RS04960 PF13557 AMD13_RS04960 AMD13_RS04965 PF00392 Bacterial regulatory proteins, gntR family AMD13_RS04965 PF07729 FCD domain AMD13_RS04970 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD13_RS04975 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD13_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS04980 PF03466 LysR substrate binding domain AMD13_RS04985 PF00501 AMP-binding enzyme AMD13_RS04985 PF13193 AMP-binding enzyme C-terminal domain AMD13_RS04990 PF00171 Aldehyde dehydrogenase family AMD13_RS04995 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS05000 PF12802 MarR family AMD13_RS05005 PF13202 EF hand AMD13_RS05015 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD13_RS05020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD13_RS05025 PF01728 FtsJ-like methyltransferase AMD13_RS05030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD13_RS05060 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD13_RS05060 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD13_RS05065 PF13409 Glutathione S-transferase, N-terminal domain AMD13_RS05070 PF09413 Domain of unknown function (DUF2007) AMD13_RS05075 PF00072 Response regulator receiver domain AMD13_RS05080 PF00072 Response regulator receiver domain AMD13_RS05080 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS05080 PF00672 HAMP domain AMD13_RS05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS05080 PF05227 CHASE3 domain AMD13_RS05085 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS05090 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD13_RS05095 PF01625 Peptide methionine sulfoxide reductase AMD13_RS05100 PF01965 DJ-1/PfpI family AMD13_RS05105 PF00923 Transaldolase AMD13_RS05110 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD13_RS05110 PF14760 Rnk N-terminus AMD13_RS05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS05115 PF03466 LysR substrate binding domain AMD13_RS05120 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS05120 PF13192 Thioredoxin domain AMD13_RS05125 PF00578 AhpC/TSA family AMD13_RS05125 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD13_RS05130 PF05175 Methyltransferase small domain AMD13_RS05135 PF00561 alpha/beta hydrolase fold AMD13_RS05140 PF05013 N-formylglutamate amidohydrolase AMD13_RS05145 PF00293 NUDIX domain AMD13_RS05150 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD13_RS05150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD13_RS05155 PF00881 Nitroreductase family AMD13_RS05160 PF07793 AMD13_RS05160 AMD13_RS05165 PF07793 AMD13_RS05165 AMD13_RS05170 PF12146 Putative lysophospholipase AMD13_RS05175 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS05175 PF13305 WHG domain AMD13_RS05180 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD13_RS05180 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD13_RS05185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD13_RS05190 PF11304 AMD13_RS05190 AMD13_RS05200 PF04542 Sigma-70 region 2 AMD13_RS05200 PF08281 Sigma-70, region 4 AMD13_RS05205 PF12769 Domain of unknown function (DUF3814) AMD13_RS05210 PF02233 NAD(P) transhydrogenase beta subunit AMD13_RS05220 PF01883 Domain of unknown function DUF59 AMD13_RS05225 PF01063 Aminotransferase class IV AMD13_RS05230 PF00082 Subtilase family AMD13_RS05230 PF04151 Bacterial pre-peptidase C-terminal domain AMD13_RS05235 PF00082 Subtilase family AMD13_RS05240 PF00082 Subtilase family AMD13_RS05240 PF04151 Bacterial pre-peptidase C-terminal domain AMD13_RS05245 PF04073 Aminoacyl-tRNA editing domain AMD13_RS05250 PF00710 Asparaginase AMD13_RS05260 PF09842 AMD13_RS05260 AMD13_RS05265 PF03358 NADPH-dependent FMN reductase AMD13_RS05270 PF03631 AMD13_RS05270 AMD13_RS05275 PF00578 AhpC/TSA family AMD13_RS05280 PF00708 Acylphosphatase AMD13_RS05290 PF03976 Polyphosphate kinase 2 (PPK2) AMD13_RS05295 PF00994 Probable molybdopterin binding domain AMD13_RS05300 PF13844 Glycosyl transferase family 41 AMD13_RS05300 PF14559 Tetratricopeptide repeat AMD13_RS05305 PF00472 RF-1 domain AMD13_RS05305 PF03462 PCRF domain AMD13_RS05310 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD13_RS05310 PF01488 Shikimate / quinate 5-dehydrogenase AMD13_RS05310 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD13_RS05315 PF13429 Tetratricopeptide repeat AMD13_RS05320 PF03550 Outer membrane lipoprotein LolB AMD13_RS05325 PF00288 GHMP kinases N terminal domain AMD13_RS05325 PF08544 GHMP kinases C terminal AMD13_RS05335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD13_RS05335 PF14572 Phosphoribosyl synthetase-associated domain AMD13_RS05340 PF01386 Ribosomal L25p family AMD13_RS05340 PF14693 Ribosomal protein TL5, C-terminal domain AMD13_RS05345 PF01195 Peptidyl-tRNA hydrolase AMD13_RS05350 PF01926 50S ribosome-binding GTPase AMD13_RS05350 PF06071 Protein of unknown function (DUF933) AMD13_RS05370 PF00009 Elongation factor Tu GTP binding domain AMD13_RS05370 PF03143 Elongation factor Tu C-terminal domain AMD13_RS05370 PF03144 Elongation factor Tu domain 2 AMD13_RS05380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD13_RS05385 PF00467 KOW motif AMD13_RS05385 PF02357 Transcription termination factor nusG AMD13_RS05390 PF00298 Ribosomal protein L11, RNA binding domain AMD13_RS05390 PF03946 Ribosomal protein L11, N-terminal domain AMD13_RS05395 PF00687 Ribosomal protein L1p/L10e family AMD13_RS05400 PF00466 Ribosomal protein L10 AMD13_RS05405 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD13_RS05405 PF16320 AMD13_RS05405 AMD13_RS05410 PF00562 RNA polymerase Rpb2, domain 6 AMD13_RS05410 PF04560 RNA polymerase Rpb2, domain 7 AMD13_RS05410 PF04561 RNA polymerase Rpb2, domain 2 AMD13_RS05410 PF04563 RNA polymerase beta subunit AMD13_RS05410 PF04565 RNA polymerase Rpb2, domain 3 AMD13_RS05410 PF10385 RNA polymerase beta subunit external 1 domain AMD13_RS05415 PF00623 RNA polymerase Rpb1, domain 2 AMD13_RS05415 PF04983 RNA polymerase Rpb1, domain 3 AMD13_RS05415 PF04997 RNA polymerase Rpb1, domain 1 AMD13_RS05415 PF04998 RNA polymerase Rpb1, domain 5 AMD13_RS05415 PF05000 RNA polymerase Rpb1, domain 4 AMD13_RS05420 PF00164 Ribosomal protein S12/S23 AMD13_RS05425 PF00177 Ribosomal protein S7p/S5e AMD13_RS05430 PF00009 Elongation factor Tu GTP binding domain AMD13_RS05430 PF00679 Elongation factor G C-terminus AMD13_RS05430 PF03144 Elongation factor Tu domain 2 AMD13_RS05430 PF03764 Elongation factor G, domain IV AMD13_RS05430 PF14492 Elongation Factor G, domain II AMD13_RS05435 PF00009 Elongation factor Tu GTP binding domain AMD13_RS05435 PF03143 Elongation factor Tu C-terminal domain AMD13_RS05435 PF03144 Elongation factor Tu domain 2 AMD13_RS05440 PF00338 Ribosomal protein S10p/S20e AMD13_RS05445 PF00297 Ribosomal protein L3 AMD13_RS05450 PF00573 Ribosomal protein L4/L1 family AMD13_RS05455 PF00276 Ribosomal protein L23 AMD13_RS05460 PF00181 Ribosomal Proteins L2, RNA binding domain AMD13_RS05460 PF03947 Ribosomal Proteins L2, C-terminal domain AMD13_RS05465 PF00203 Ribosomal protein S19 AMD13_RS05470 PF00237 Ribosomal protein L22p/L17e AMD13_RS05475 PF00189 Ribosomal protein S3, C-terminal domain AMD13_RS05475 PF07650 KH domain AMD13_RS05480 PF00252 Ribosomal protein L16p/L10e AMD13_RS05485 PF00831 Ribosomal L29 protein AMD13_RS05490 PF00366 Ribosomal protein S17 AMD13_RS05495 PF00238 Ribosomal protein L14p/L23e AMD13_RS05500 PF00467 KOW motif AMD13_RS05500 PF17136 AMD13_RS05500 AMD13_RS05505 PF00281 Ribosomal protein L5 AMD13_RS05505 PF00673 ribosomal L5P family C-terminus AMD13_RS05510 PF00253 Ribosomal protein S14p/S29e AMD13_RS05515 PF00410 Ribosomal protein S8 AMD13_RS05520 PF00347 Ribosomal protein L6 AMD13_RS05525 PF00861 Ribosomal L18p/L5e family AMD13_RS05530 PF00333 Ribosomal protein S5, N-terminal domain AMD13_RS05530 PF03719 Ribosomal protein S5, C-terminal domain AMD13_RS05535 PF00327 Ribosomal protein L30p/L7e AMD13_RS05540 PF00828 Ribosomal protein L18e/L15 AMD13_RS05545 PF00344 SecY translocase AMD13_RS05550 PF00416 Ribosomal protein S13/S18 AMD13_RS05555 PF00411 Ribosomal protein S11 AMD13_RS05560 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD13_RS05560 PF01479 S4 domain AMD13_RS05565 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD13_RS05565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD13_RS05565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD13_RS05570 PF01196 Ribosomal protein L17 AMD13_RS05575 PF02600 Disulfide bond formation protein DsbB AMD13_RS05585 PF00593 TonB dependent receptor AMD13_RS05585 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS05590 PF01474 Class-II DAHP synthetase family AMD13_RS05595 PF00924 Mechanosensitive ion channel AMD13_RS05600 PF01425 Amidase AMD13_RS05605 PF09900 AMD13_RS05605 AMD13_RS05610 PF00009 Elongation factor Tu GTP binding domain AMD13_RS05610 PF00679 Elongation factor G C-terminus AMD13_RS05610 PF03144 Elongation factor Tu domain 2 AMD13_RS05615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD13_RS05620 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD13_RS05620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD13_RS05625 PF00043 Glutathione S-transferase, C-terminal domain AMD13_RS05625 PF02798 Glutathione S-transferase, N-terminal domain AMD13_RS05630 PF07486 Cell Wall Hydrolase AMD13_RS05635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD13_RS05635 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS05640 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS05640 PF13602 Zinc-binding dehydrogenase AMD13_RS05645 PF00691 OmpA family AMD13_RS05645 PF13505 Outer membrane protein beta-barrel domain AMD13_RS05655 PF00849 RNA pseudouridylate synthase AMD13_RS05655 PF01479 S4 domain AMD13_RS05665 PF00155 Aminotransferase class I and II AMD13_RS05670 PF13531 Bacterial extracellular solute-binding protein AMD13_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS05685 PF00005 ABC transporter AMD13_RS05685 PF12857 AMD13_RS05685 AMD13_RS05690 PF09694 AMD13_RS05690 AMD13_RS05695 PF00107 Zinc-binding dehydrogenase AMD13_RS05695 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS05705 PF00593 TonB dependent receptor AMD13_RS05705 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS05710 PF04185 Phosphoesterase family AMD13_RS05710 PF05506 AMD13_RS05710 AMD13_RS05715 PF10459 Peptidase S46 AMD13_RS05720 PF10459 Peptidase S46 AMD13_RS05725 PF00300 Histidine phosphatase superfamily (branch 1) AMD13_RS05730 PF08245 Mur ligase middle domain AMD13_RS05735 PF05036 Sporulation related domain AMD13_RS05740 PF02674 AMD13_RS05740 AMD13_RS05745 PF13522 Glutamine amidotransferase domain AMD13_RS05750 PF04305 AMD13_RS05750 AMD13_RS05760 PF13688 Metallo-peptidase family M12 AMD13_RS05770 PF00149 Calcineurin-like phosphoesterase AMD13_RS05775 PF01569 PAP2 superfamily AMD13_RS05780 PF00534 Glycosyl transferases group 1 AMD13_RS05780 PF13439 Glycosyltransferase Family 4 AMD13_RS05785 PF02541 Ppx/GppA phosphatase family AMD13_RS05790 PF02503 Polyphosphate kinase middle domain AMD13_RS05790 PF13089 Polyphosphate kinase N-terminal domain AMD13_RS05790 PF13090 Polyphosphate kinase C-terminal domain AMD13_RS05795 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS05795 PF11808 AMD13_RS05795 AMD13_RS05800 PF00072 Response regulator receiver domain AMD13_RS05800 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS05805 PF01435 Peptidase family M48 AMD13_RS05810 PF00462 Glutaredoxin AMD13_RS05815 PF02627 Carboxymuconolactone decarboxylase family AMD13_RS05820 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD13_RS05825 PF12811 AMD13_RS05825 AMD13_RS05850 PF13333 AMD13_RS05850 AMD13_RS05860 PF01527 Transposase AMD13_RS05895 PF07275 Antirestriction protein (ArdA) AMD13_RS05915 PF00959 Phage lysozyme AMD13_RS05930 PF04550 AMD13_RS05930 AMD13_RS05945 PF01527 Transposase AMD13_RS05950 PF00665 Integrase core domain AMD13_RS05950 PF13276 AMD13_RS05950 AMD13_RS05955 PF14700 DNA-directed RNA polymerase N-terminal AMD13_RS05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS05975 PF05697 Bacterial trigger factor protein (TF) AMD13_RS05975 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD13_RS05980 PF00574 Clp protease AMD13_RS05985 PF06689 ClpX C4-type zinc finger AMD13_RS05985 PF07724 AAA domain (Cdc48 subfamily) AMD13_RS05985 PF10431 C-terminal, D2-small domain, of ClpB protein AMD13_RS05990 PF00004 ATPase family associated with various cellular activities (AAA) AMD13_RS05990 PF02190 ATP-dependent protease La (LON) domain AMD13_RS05990 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD13_RS05995 PF00216 Bacterial DNA-binding protein AMD13_RS06015 PF13145 PPIC-type PPIASE domain AMD13_RS06015 PF13616 PPIC-type PPIASE domain AMD13_RS06015 PF13623 AMD13_RS06015 AMD13_RS06020 PF01464 Transglycosylase SLT domain AMD13_RS06020 PF01476 LysM domain AMD13_RS06025 PF00753 Metallo-beta-lactamase superfamily AMD13_RS06025 PF16123 AMD13_RS06025 AMD13_RS06035 PF00075 RNase H AMD13_RS06040 PF00929 Exonuclease AMD13_RS06045 PF13672 Protein phosphatase 2C AMD13_RS06060 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD13_RS06065 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family AMD13_RS06070 PF12706 Beta-lactamase superfamily domain AMD13_RS06075 PF04055 Radical SAM superfamily AMD13_RS06075 PF06463 Molybdenum Cofactor Synthesis C AMD13_RS06075 PF13353 4Fe-4S single cluster domain AMD13_RS06085 PF01967 MoaC family AMD13_RS06090 PF02597 ThiS family AMD13_RS06095 PF02391 MoaE protein AMD13_RS06100 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS06105 PF01527 Transposase AMD13_RS06115 PF13333 AMD13_RS06115 AMD13_RS06120 PF03389 MobA/MobL family AMD13_RS06135 PF00589 Phage integrase family AMD13_RS06145 PF12169 DNA polymerase III subunits gamma and tau domain III AMD13_RS06145 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD13_RS06145 PF13177 DNA polymerase III, delta subunit AMD13_RS06150 PF02575 YbaB/EbfC DNA-binding family AMD13_RS06155 PF02132 RecR protein AMD13_RS06155 PF13662 Toprim domain AMD13_RS06160 PF01230 HIT domain AMD13_RS06165 PF03843 AMD13_RS06165 AMD13_RS06170 PF01841 Transglutaminase-like superfamily AMD13_RS06170 PF11992 AMD13_RS06170 AMD13_RS06175 PF01882 AMD13_RS06175 AMD13_RS06180 PF07726 ATPase family associated with various cellular activities (AAA) AMD13_RS06185 PF13231 AMD13_RS06185 AMD13_RS06200 PF02545 Maf-like protein AMD13_RS06205 PF02620 AMD13_RS06205 AMD13_RS06210 PF01783 Ribosomal L32p protein family AMD13_RS06215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD13_RS06215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD13_RS06220 PF08670 AMD13_RS06220 AMD13_RS06225 PF00698 Acyl transferase domain AMD13_RS06230 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS06235 PF00550 Phosphopantetheine attachment site AMD13_RS06240 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD13_RS06240 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD13_RS06245 PF00425 chorismate binding enzyme AMD13_RS06250 PF02618 YceG-like family AMD13_RS06255 PF13177 DNA polymerase III, delta subunit AMD13_RS06260 PF07238 PilZ domain AMD13_RS06275 PF00158 Sigma-54 interaction domain AMD13_RS06275 PF02954 Bacterial regulatory protein, Fis family AMD13_RS06275 PF06506 Propionate catabolism activator AMD13_RS06280 PF13714 Phosphoenolpyruvate phosphomutase AMD13_RS06285 PF00285 Citrate synthase AMD13_RS06290 PF00330 Aconitase family (aconitate hydratase) AMD13_RS06290 PF00694 Aconitase C-terminal domain AMD13_RS06295 PF03693 Uncharacterised protein family (UPF0156) AMD13_RS06300 PF04303 PrpF protein AMD13_RS06305 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS06310 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD13_RS06315 PF00207 Alpha-2-macroglobulin family AMD13_RS06315 PF01835 MG2 domain AMD13_RS06315 PF07703 Alpha-2-macroglobulin family N-terminal region AMD13_RS06315 PF11974 Alpha-2-macroglobulin MG1 domain AMD13_RS06320 PF00593 TonB dependent receptor AMD13_RS06320 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS06325 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD13_RS06325 PF16387 AMD13_RS06325 AMD13_RS06330 PF00905 Penicillin binding protein transpeptidase domain AMD13_RS06330 PF00912 Transglycosylase AMD13_RS06330 PF06832 AMD13_RS06330 AMD13_RS06335 PF00210 Ferritin-like domain AMD13_RS06340 PF08534 Redoxin AMD13_RS06345 PF00011 Hsp20/alpha crystallin family AMD13_RS06350 PF00226 DnaJ domain AMD13_RS06350 PF01556 DnaJ C terminal domain AMD13_RS06355 PF00072 Response regulator receiver domain AMD13_RS06360 PF01145 SPFH domain / Band 7 family AMD13_RS06365 PF01145 SPFH domain / Band 7 family AMD13_RS06370 PF01797 Transposase IS200 like AMD13_RS06375 PF00709 Adenylosuccinate synthetase AMD13_RS06380 PF01433 Peptidase family M1 AMD13_RS06380 PF11838 ERAP1-like C-terminal domain AMD13_RS06390 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS06395 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS06435 PF05016 Plasmid stabilisation system protein AMD13_RS06445 PF00069 Protein kinase domain AMD13_RS06455 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS06460 PF00300 Histidine phosphatase superfamily (branch 1) AMD13_RS06465 PF01256 Carbohydrate kinase AMD13_RS06470 PF02055 O-Glycosyl hydrolase family 30 AMD13_RS06470 PF17189 AMD13_RS06470 AMD13_RS06475 PF00723 Glycosyl hydrolases family 15 AMD13_RS06480 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS06485 PF07971 Glycosyl hydrolase family 92 AMD13_RS06490 PF00106 short chain dehydrogenase AMD13_RS06500 PF13532 2OG-Fe(II) oxygenase superfamily AMD13_RS06505 PF00027 Cyclic nucleotide-binding domain AMD13_RS06505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS06510 PF02148 Zn-finger in ubiquitin-hydrolases and other protein AMD13_RS06515 PF00563 EAL domain AMD13_RS06520 PF13328 HD domain AMD13_RS06525 PF00005 ABC transporter AMD13_RS06530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD13_RS06530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD13_RS06535 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD13_RS06535 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD13_RS06540 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD13_RS06540 PF01799 [2Fe-2S] binding domain AMD13_RS06545 PF05559 AMD13_RS06545 AMD13_RS06555 PF07883 Cupin domain AMD13_RS06565 PF02661 Fic/DOC family AMD13_RS06570 PF04014 Antidote-toxin recognition MazE AMD13_RS06575 PF00717 Peptidase S24-like AMD13_RS06575 PF01726 LexA DNA binding domain AMD13_RS06585 PF00817 impB/mucB/samB family AMD13_RS06590 PF02811 PHP domain AMD13_RS06590 PF07733 Bacterial DNA polymerase III alpha subunit AMD13_RS06590 PF14579 Helix-hairpin-helix motif AMD13_RS06595 PF00326 Prolyl oligopeptidase family AMD13_RS06600 PF08668 HDOD domain AMD13_RS06605 PF03169 AMD13_RS06605 AMD13_RS06610 PF13557 AMD13_RS06610 AMD13_RS06620 PF00326 Prolyl oligopeptidase family AMD13_RS06620 PF07676 WD40-like Beta Propeller Repeat AMD13_RS06635 PF08448 PAS fold AMD13_RS06635 PF12833 Helix-turn-helix domain AMD13_RS06650 PF00199 Catalase AMD13_RS06650 PF06628 Catalase-related immune-responsive AMD13_RS06655 PF00248 Aldo/keto reductase family AMD13_RS06660 PF00135 Carboxylesterase family AMD13_RS06665 PF02347 Glycine cleavage system P-protein AMD13_RS06670 PF07690 Major Facilitator Superfamily AMD13_RS06680 PF01401 Angiotensin-converting enzyme AMD13_RS06685 PF00884 Sulfatase AMD13_RS06685 PF08019 AMD13_RS06685 AMD13_RS06690 PF01569 PAP2 superfamily AMD13_RS06695 PF13231 AMD13_RS06695 AMD13_RS06700 PF00072 Response regulator receiver domain AMD13_RS06700 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS06705 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS06715 PF03776 Septum formation topological specificity factor MinE AMD13_RS06720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD13_RS06725 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD13_RS06725 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD13_RS06730 PF00583 Acetyltransferase (GNAT) family AMD13_RS06740 PF07730 Histidine kinase AMD13_RS06745 PF00072 Response regulator receiver domain AMD13_RS06745 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS06750 PF10604 Polyketide cyclase / dehydrase and lipid transport AMD13_RS06755 PF04241 AMD13_RS06755 AMD13_RS06760 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD13_RS06765 PF02557 D-alanyl-D-alanine carboxypeptidase AMD13_RS06780 PF01145 SPFH domain / Band 7 family AMD13_RS06785 PF02222 ATP-grasp domain AMD13_RS06790 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS06795 PF04376 AMD13_RS06795 AMD13_RS06795 PF04377 AMD13_RS06795 AMD13_RS06800 PF13202 EF hand AMD13_RS06800 PF13499 EF-hand domain pair AMD13_RS06810 PF09413 Domain of unknown function (DUF2007) AMD13_RS06815 PF13622 Thioesterase-like superfamily AMD13_RS06820 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS06825 PF04314 Protein of unknown function (DUF461) AMD13_RS06830 PF13279 Thioesterase-like superfamily AMD13_RS06835 PF00005 ABC transporter AMD13_RS06840 PF00829 Ribosomal prokaryotic L21 protein AMD13_RS06845 PF01016 Ribosomal L27 protein AMD13_RS06850 PF01018 GTP1/OBG AMD13_RS06850 PF01926 50S ribosome-binding GTPase AMD13_RS06855 PF01649 Ribosomal protein S20 AMD13_RS06860 PF03023 AMD13_RS06860 AMD13_RS06865 PF01687 Riboflavin kinase AMD13_RS06865 PF06574 FAD synthetase AMD13_RS06870 PF00133 tRNA synthetases class I (I, L, M and V) AMD13_RS06870 PF06827 Zinc finger found in FPG and IleRS AMD13_RS06870 PF08264 Anticodon-binding domain of tRNA AMD13_RS06875 PF01252 AMD13_RS06875 AMD13_RS06880 PF02401 LytB protein AMD13_RS06890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD13_RS06890 PF06481 COX Aromatic Rich Motif AMD13_RS06895 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD13_RS06900 PF00510 Cytochrome c oxidase subunit III AMD13_RS06905 PF03626 AMD13_RS06905 AMD13_RS06910 PF05299 M61 glycyl aminopeptidase AMD13_RS06910 PF07720 Tetratricopeptide repeat AMD13_RS06915 PF13481 AAA domain AMD13_RS06915 PF13541 Subunit ChlI of Mg-chelatase AMD13_RS06920 PF05656 AMD13_RS06920 AMD13_RS06925 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS06930 PF12833 Helix-turn-helix domain AMD13_RS06935 PF00183 Hsp90 protein AMD13_RS06935 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS06945 PF01740 STAS domain AMD13_RS06945 PF14361 AMD13_RS06945 AMD13_RS06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS06960 PF07228 Stage II sporulation protein E (SpoIIE) AMD13_RS06960 PF13581 Histidine kinase-like ATPase domain AMD13_RS06965 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS06970 PF00072 Response regulator receiver domain AMD13_RS06970 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS06970 PF08448 PAS fold AMD13_RS06975 PF04616 Glycosyl hydrolases family 43 AMD13_RS06980 PF00593 TonB dependent receptor AMD13_RS06980 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS06985 PF00085 Thioredoxin AMD13_RS06990 PF07237 Protein of unknown function (DUF1428) AMD13_RS06995 PF00072 Response regulator receiver domain AMD13_RS06995 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS07000 PF01339 CheB methylesterase AMD13_RS07005 PF01739 CheR methyltransferase, SAM binding domain AMD13_RS07005 PF03705 CheR methyltransferase, all-alpha domain AMD13_RS07010 PF00072 Response regulator receiver domain AMD13_RS07010 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS07010 PF13185 GAF domain AMD13_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS07015 PF13426 PAS domain AMD13_RS07020 PF00072 Response regulator receiver domain AMD13_RS07025 PF00722 Glycosyl hydrolases family 16 AMD13_RS07030 PF06964 Alpha-L-arabinofuranosidase C-terminus AMD13_RS07040 PF01263 Aldose 1-epimerase AMD13_RS07045 PF01578 AMD13_RS07045 AMD13_RS07050 PF00448 SRP54-type protein, GTPase domain AMD13_RS07050 PF02881 SRP54-type protein, helical bundle domain AMD13_RS07050 PF02978 Signal peptide binding domain AMD13_RS07055 PF03060 Nitronate monooxygenase AMD13_RS07060 PF01063 Aminotransferase class IV AMD13_RS07065 PF00886 Ribosomal protein S16 AMD13_RS07070 PF01782 RimM N-terminal domain AMD13_RS07070 PF05239 PRC-barrel domain AMD13_RS07075 PF01746 tRNA (Guanine-1)-methyltransferase AMD13_RS07080 PF01245 Ribosomal protein L19 AMD13_RS07095 PF08279 HTH domain AMD13_RS07095 PF13280 AMD13_RS07095 AMD13_RS07100 PF00043 Glutathione S-transferase, C-terminal domain AMD13_RS07100 PF13417 Glutathione S-transferase, N-terminal domain AMD13_RS07105 PF01479 S4 domain AMD13_RS07110 PF00141 Peroxidase AMD13_RS07115 PF06078 Bacterial protein of unknown function (DUF937) AMD13_RS07120 PF00488 MutS domain V AMD13_RS07120 PF01624 MutS domain I AMD13_RS07120 PF05188 MutS domain II AMD13_RS07120 PF05190 MutS family domain IV AMD13_RS07120 PF05192 MutS domain III AMD13_RS07125 PF05593 AMD13_RS07125 AMD13_RS07130 PF16158 AMD13_RS07130 AMD13_RS07135 PF14085 AMD13_RS07135 AMD13_RS07140 PF00754 F5/8 type C domain AMD13_RS07140 PF01120 Alpha-L-fucosidase AMD13_RS07150 PF00703 Glycosyl hydrolases family 2 AMD13_RS07150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD13_RS07150 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD13_RS07150 PF16355 AMD13_RS07150 AMD13_RS07155 PF07745 Glycosyl hydrolase family 53 AMD13_RS07160 PF00593 TonB dependent receptor AMD13_RS07160 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS07165 PF06114 Domain of unknown function (DUF955) AMD13_RS07165 PF09856 AMD13_RS07165 AMD13_RS07165 PF13560 Helix-turn-helix domain AMD13_RS07170 PF00171 Aldehyde dehydrogenase family AMD13_RS07175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS07175 PF02770 Acyl-CoA dehydrogenase, middle domain AMD13_RS07175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD13_RS07180 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS07185 PF16113 AMD13_RS07185 AMD13_RS07190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD13_RS07190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD13_RS07195 PF01545 Cation efflux family AMD13_RS07200 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS07200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD13_RS07200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD13_RS07205 PF04542 Sigma-70 region 2 AMD13_RS07205 PF08281 Sigma-70, region 4 AMD13_RS07210 PF03872 Anti sigma-E protein RseA, N-terminal domain AMD13_RS07215 PF13180 PDZ domain AMD13_RS07215 PF13365 Trypsin-like peptidase domain AMD13_RS07220 PF00009 Elongation factor Tu GTP binding domain AMD13_RS07220 PF00679 Elongation factor G C-terminus AMD13_RS07220 PF03144 Elongation factor Tu domain 2 AMD13_RS07220 PF06421 GTP-binding protein LepA C-terminus AMD13_RS07225 PF00717 Peptidase S24-like AMD13_RS07230 PF16137 AMD13_RS07230 AMD13_RS07235 PF00035 Double-stranded RNA binding motif AMD13_RS07235 PF14622 Ribonuclease-III-like AMD13_RS07240 PF01926 50S ribosome-binding GTPase AMD13_RS07240 PF07650 KH domain AMD13_RS07245 PF02565 Recombination protein O C terminal AMD13_RS07245 PF11967 Recombination protein O N terminal AMD13_RS07250 PF00072 Response regulator receiver domain AMD13_RS07250 PF01627 Hpt domain AMD13_RS07255 PF05958 tRNA (Uracil-5-)-methyltransferase AMD13_RS07260 PF01928 CYTH domain AMD13_RS07265 PF01323 DSBA-like thioredoxin domain AMD13_RS07270 PF13450 NAD(P)-binding Rossmann-like domain AMD13_RS07275 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD13_RS07280 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD13_RS07285 PF00156 Phosphoribosyl transferase domain AMD13_RS07290 PF01048 Phosphorylase superfamily AMD13_RS07295 PF00313 'Cold-shock' DNA-binding domain AMD13_RS07300 PF01494 FAD binding domain AMD13_RS07305 PF00149 Calcineurin-like phosphoesterase AMD13_RS07310 PF00270 DEAD/DEAH box helicase AMD13_RS07310 PF00271 Helicase conserved C-terminal domain AMD13_RS07310 PF08494 AMD13_RS07310 AMD13_RS07315 PF01068 ATP dependent DNA ligase domain AMD13_RS07315 PF04675 DNA ligase N terminus AMD13_RS07315 PF04679 ATP dependent DNA ligase C terminal region AMD13_RS07335 PF04519 AMD13_RS07335 AMD13_RS07340 PF00990 GGDEF domain AMD13_RS07340 PF05227 CHASE3 domain AMD13_RS07340 PF13185 GAF domain AMD13_RS07355 PF00108 Thiolase, N-terminal domain AMD13_RS07355 PF02803 Thiolase, C-terminal domain AMD13_RS07360 PF00082 Subtilase family AMD13_RS07360 PF03797 Autotransporter beta-domain AMD13_RS07360 PF12951 AMD13_RS07360 AMD13_RS07365 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD13_RS07365 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD13_RS07370 PF13640 2OG-Fe(II) oxygenase superfamily AMD13_RS07375 PF01863 Protein of unknown function DUF45 AMD13_RS07380 PF07043 AMD13_RS07380 AMD13_RS07385 PF10982 Protein of unknown function (DUF2789) AMD13_RS07390 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD13_RS07395 PF00924 Mechanosensitive ion channel AMD13_RS07410 PF06723 MreB/Mbl protein AMD13_RS07415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD13_RS07420 PF01545 Cation efflux family AMD13_RS07425 PF03831 PhnA protein AMD13_RS07425 PF08274 PhnA Zinc-Ribbon AMD13_RS07430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD13_RS07435 PF07690 Major Facilitator Superfamily AMD13_RS07445 PF09537 Domain of unknown function (DUF2383) AMD13_RS07450 PF13563 2'-5' RNA ligase superfamily AMD13_RS07460 PF09791 AMD13_RS07460 AMD13_RS07465 PF06057 Bacterial virulence protein (VirJ) AMD13_RS07470 PF03706 AMD13_RS07470 AMD13_RS07470 PF09924 Uncharacterized conserved protein (DUF2156) AMD13_RS07475 PF06197 AMD13_RS07475 AMD13_RS07480 PF01042 Endoribonuclease L-PSP AMD13_RS07485 PF02353 Mycolic acid cyclopropane synthetase AMD13_RS07490 PF06966 AMD13_RS07490 AMD13_RS07495 PF11086 AMD13_RS07495 AMD13_RS07500 PF02353 Mycolic acid cyclopropane synthetase AMD13_RS07505 PF07103 AMD13_RS07505 AMD13_RS07510 PF01593 Flavin containing amine oxidoreductase AMD13_RS07515 PF00487 AMD13_RS07515 AMD13_RS07520 PF10099 AMD13_RS07520 AMD13_RS07525 PF04542 Sigma-70 region 2 AMD13_RS07525 PF08281 Sigma-70, region 4 AMD13_RS07545 PF04060 Putative Fe-S cluster AMD13_RS07545 PF14697 4Fe-4S dicluster domain AMD13_RS07550 PF12710 haloacid dehalogenase-like hydrolase AMD13_RS07555 PF01588 Putative tRNA binding domain AMD13_RS07555 PF09334 tRNA synthetases class I (M) AMD13_RS07560 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD13_RS07565 PF01433 Peptidase family M1 AMD13_RS07565 PF12679 AMD13_RS07565 AMD13_RS07570 PF00005 ABC transporter AMD13_RS07575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS07580 PF00324 Amino acid permease AMD13_RS07585 PF02574 Homocysteine S-methyltransferase AMD13_RS07590 PF05960 Bacterial protein of unknown function (DUF885) AMD13_RS07595 PF02592 AMD13_RS07595 AMD13_RS07600 PF04367 AMD13_RS07600 AMD13_RS07610 PF13372 Alginate export AMD13_RS07615 PF03551 Transcriptional regulator PadR-like family AMD13_RS07620 PF13796 AMD13_RS07620 AMD13_RS07625 PF06850 AMD13_RS07625 AMD13_RS07630 PF13489 Methyltransferase domain AMD13_RS07635 PF03653 AMD13_RS07635 AMD13_RS07645 PF14559 Tetratricopeptide repeat AMD13_RS07650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD13_RS07655 PF01336 OB-fold nucleic acid binding domain AMD13_RS07655 PF02811 PHP domain AMD13_RS07655 PF07733 Bacterial DNA polymerase III alpha subunit AMD13_RS07655 PF14579 Helix-hairpin-helix motif AMD13_RS07660 PF01351 Ribonuclease HII AMD13_RS07665 PF02684 AMD13_RS07665 AMD13_RS07670 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS07670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD13_RS07675 PF07977 FabA-like domain AMD13_RS07680 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS07680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD13_RS07690 PF01103 Surface antigen AMD13_RS07690 PF07244 Surface antigen variable number repeat AMD13_RS07695 PF02163 Peptidase family M50 AMD13_RS07700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD13_RS07700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AMD13_RS07700 PF13288 DXP reductoisomerase C-terminal domain AMD13_RS07705 PF01148 Cytidylyltransferase family AMD13_RS07710 PF01255 Putative undecaprenyl diphosphate synthase AMD13_RS07715 PF01765 Ribosome recycling factor AMD13_RS07720 PF00696 Amino acid kinase family AMD13_RS07725 PF00990 GGDEF domain AMD13_RS07725 PF08668 HDOD domain AMD13_RS07730 PF00889 Elongation factor TS AMD13_RS07735 PF00318 Ribosomal protein S2 AMD13_RS07740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD13_RS07750 PF05229 AMD13_RS07750 AMD13_RS07755 PF00577 Outer membrane usher protein AMD13_RS07755 PF13953 PapC C-terminal domain AMD13_RS07760 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AMD13_RS07765 PF05229 AMD13_RS07765 AMD13_RS07770 PF00557 Metallopeptidase family M24 AMD13_RS07775 PF01909 Nucleotidyltransferase domain AMD13_RS07775 PF01966 HD domain AMD13_RS07775 PF08335 GlnD PII-uridylyltransferase AMD13_RS07780 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS07780 PF14602 Hexapeptide repeat of succinyl-transferase AMD13_RS07780 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD13_RS07785 PF03960 ArsC family AMD13_RS07790 PF01546 Peptidase family M20/M25/M40 AMD13_RS07790 PF07687 Peptidase dimerisation domain AMD13_RS07795 PF00733 Asparagine synthase AMD13_RS07795 PF13537 Glutamine amidotransferase domain AMD13_RS07800 PF13229 Right handed beta helix region AMD13_RS07805 PF00593 TonB dependent receptor AMD13_RS07805 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS07820 PF00210 Ferritin-like domain AMD13_RS07825 PF05724 Thiopurine S-methyltransferase (TPMT) AMD13_RS07835 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD13_RS07835 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD13_RS07840 PF02311 AraC-like ligand binding domain AMD13_RS07840 PF12833 Helix-turn-helix domain AMD13_RS07845 PF01047 MarR family AMD13_RS07850 PF02321 Outer membrane efflux protein AMD13_RS07855 PF00529 HlyD family secretion protein AMD13_RS07855 PF16576 AMD13_RS07855 AMD13_RS07860 PF07690 Major Facilitator Superfamily AMD13_RS07870 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD13_RS07870 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD13_RS07870 PF14310 Fibronectin type III-like domain AMD13_RS07875 PF00246 Zinc carboxypeptidase AMD13_RS07880 PF00854 POT family AMD13_RS07885 PF01694 Rhomboid family AMD13_RS07895 PF14542 GCN5-related N-acetyl-transferase AMD13_RS07900 PF13739 Domain of unknown function (DUF4163) AMD13_RS07905 PF01047 MarR family AMD13_RS07910 PF01432 Peptidase family M3 AMD13_RS07915 PF00255 Glutathione peroxidase AMD13_RS07920 PF00175 Oxidoreductase NAD-binding domain AMD13_RS07920 PF00970 Oxidoreductase FAD-binding domain AMD13_RS07925 PF00005 ABC transporter AMD13_RS07930 PF05681 AMD13_RS07930 AMD13_RS07930 PF05683 Fumarase C-terminus AMD13_RS07935 PF02798 Glutathione S-transferase, N-terminal domain AMD13_RS07935 PF14497 Glutathione S-transferase, C-terminal domain AMD13_RS07940 PF00484 Carbonic anhydrase AMD13_RS07945 PF02253 Phospholipase A1 AMD13_RS07950 PF04306 AMD13_RS07950 AMD13_RS07955 PF00313 'Cold-shock' DNA-binding domain AMD13_RS07960 PF05433 AMD13_RS07960 AMD13_RS07965 PF01322 Cytochrome C' AMD13_RS07970 PF00899 ThiF family AMD13_RS07975 PF01026 TatD related DNase AMD13_RS07985 PF05433 AMD13_RS07985 AMD13_RS07990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS07990 PF02770 Acyl-CoA dehydrogenase, middle domain AMD13_RS07990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD13_RS07995 PF01841 Transglutaminase-like superfamily AMD13_RS07995 PF12969 Domain of Unknown Function with PDB structure (DUF3857) AMD13_RS08000 PF00043 Glutathione S-transferase, C-terminal domain AMD13_RS08000 PF02798 Glutathione S-transferase, N-terminal domain AMD13_RS08010 PF00733 Asparagine synthase AMD13_RS08010 PF13537 Glutamine amidotransferase domain AMD13_RS08015 PF03358 NADPH-dependent FMN reductase AMD13_RS08020 PF00772 DnaB-like helicase N terminal domain AMD13_RS08020 PF03796 DnaB-like helicase C terminal domain AMD13_RS08025 PF00875 DNA photolyase AMD13_RS08025 PF03441 FAD binding domain of DNA photolyase AMD13_RS08030 PF00691 OmpA family AMD13_RS08030 PF13488 AMD13_RS08030 AMD13_RS08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS08035 PF03466 LysR substrate binding domain AMD13_RS08045 PF00106 short chain dehydrogenase AMD13_RS08050 PF16576 AMD13_RS08050 AMD13_RS08055 PF00873 AcrB/AcrD/AcrF family AMD13_RS08060 PF00106 short chain dehydrogenase AMD13_RS08065 PF02321 Outer membrane efflux protein AMD13_RS08070 PF00990 GGDEF domain AMD13_RS08080 PF00990 GGDEF domain AMD13_RS08080 PF05227 CHASE3 domain AMD13_RS08080 PF13185 GAF domain AMD13_RS08095 PF01381 Helix-turn-helix AMD13_RS08100 PF06114 Domain of unknown function (DUF955) AMD13_RS08110 PF00816 H-NS histone family AMD13_RS08120 PF00589 Phage integrase family AMD13_RS08135 PF01381 Helix-turn-helix AMD13_RS08145 PF01527 Transposase AMD13_RS08150 PF00665 Integrase core domain AMD13_RS08155 PF03389 MobA/MobL family AMD13_RS08160 PF13910 AMD13_RS08160 AMD13_RS08180 PF00082 Subtilase family AMD13_RS08185 PF01668 SmpB protein AMD13_RS08190 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD13_RS08195 PF03658 RnfH family Ubiquitin AMD13_RS08200 PF04355 SmpA / OmlA family AMD13_RS08205 PF01475 Ferric uptake regulator family AMD13_RS08210 PF02463 RecF/RecN/SMC N terminal domain AMD13_RS08215 PF01628 HrcA protein C terminal domain AMD13_RS08215 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD13_RS08220 PF01025 GrpE AMD13_RS08225 PF00012 Hsp70 protein AMD13_RS08230 PF00226 DnaJ domain AMD13_RS08230 PF00684 DnaJ central domain AMD13_RS08230 PF01556 DnaJ C terminal domain AMD13_RS08235 PF08543 Phosphomethylpyrimidine kinase AMD13_RS08240 PF01842 ACT domain AMD13_RS08240 PF02153 Prephenate dehydrogenase AMD13_RS08250 PF02321 Outer membrane efflux protein AMD13_RS08255 PF16576 AMD13_RS08255 AMD13_RS08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS08265 PF03466 LysR substrate binding domain AMD13_RS08270 PF00005 ABC transporter AMD13_RS08270 PF00664 ABC transporter transmembrane region AMD13_RS08275 PF01205 Uncharacterized protein family UPF0029 AMD13_RS08275 PF09186 Domain of unknown function (DUF1949) AMD13_RS08280 PF03641 Possible lysine decarboxylase AMD13_RS08285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD13_RS08285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS08290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD13_RS08290 PF00364 Biotin-requiring enzyme AMD13_RS08290 PF02817 e3 binding domain AMD13_RS08295 PF00676 Dehydrogenase E1 component AMD13_RS08295 PF02779 Transketolase, pyrimidine binding domain AMD13_RS08295 PF16078 AMD13_RS08295 AMD13_RS08295 PF16870 AMD13_RS08295 AMD13_RS08300 PF13673 Acetyltransferase (GNAT) domain AMD13_RS08305 PF08007 Cupin superfamily protein AMD13_RS08310 PF11259 AMD13_RS08310 AMD13_RS08315 PF00206 Lyase AMD13_RS08315 PF08328 Adenylosuccinate lyase C-terminal AMD13_RS08320 PF00188 Cysteine-rich secretory protein family AMD13_RS08325 PF00571 CBS domain AMD13_RS08325 PF01595 AMD13_RS08325 AMD13_RS08325 PF03471 Transporter associated domain AMD13_RS08330 PF00206 Lyase AMD13_RS08330 PF10415 Fumarase C C-terminus AMD13_RS08340 PF11101 AMD13_RS08340 AMD13_RS08355 PF00005 ABC transporter AMD13_RS08360 PF00392 Bacterial regulatory proteins, gntR family AMD13_RS08365 PF00255 Glutathione peroxidase AMD13_RS08370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD13_RS08370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD13_RS08375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD13_RS08375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD13_RS08375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD13_RS08380 PF04102 SlyX AMD13_RS08385 PF09831 AMD13_RS08385 AMD13_RS08390 PF13557 AMD13_RS08390 AMD13_RS08395 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS08395 PF13377 Periplasmic binding protein-like domain AMD13_RS08400 PF07690 Major Facilitator Superfamily AMD13_RS08405 PF00294 pfkB family carbohydrate kinase AMD13_RS08410 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) AMD13_RS08415 PF00809 Pterin binding enzyme AMD13_RS08415 PF02310 B12 binding domain AMD13_RS08415 PF02607 B12 binding domain AMD13_RS08415 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD13_RS08420 PF02574 Homocysteine S-methyltransferase AMD13_RS08425 PF01022 Bacterial regulatory protein, arsR family AMD13_RS08425 PF08241 Methyltransferase domain AMD13_RS08430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS08430 PF02770 Acyl-CoA dehydrogenase, middle domain AMD13_RS08430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD13_RS08435 PF13472 GDSL-like Lipase/Acylhydrolase family AMD13_RS08445 PF00575 S1 RNA binding domain AMD13_RS08445 PF00773 RNB domain AMD13_RS08445 PF08206 Ribonuclease B OB domain AMD13_RS08450 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD13_RS08455 PF00588 SpoU rRNA Methylase family AMD13_RS08455 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD13_RS08460 PF00990 GGDEF domain AMD13_RS08460 PF07494 Two component regulator propeller AMD13_RS08460 PF07495 Y_Y_Y domain AMD13_RS08465 PF00929 Exonuclease AMD13_RS08470 PF11776 Domain of unknown function (DUF3315) AMD13_RS08475 PF01895 PhoU domain AMD13_RS08480 PF00005 ABC transporter AMD13_RS08485 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS08490 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS08495 PF12849 PBP superfamily domain AMD13_RS08500 PF12849 PBP superfamily domain AMD13_RS08505 PF07396 Phosphate-selective porin O and P AMD13_RS08515 PF00484 Carbonic anhydrase AMD13_RS08520 PF00916 AMD13_RS08520 AMD13_RS08525 PF00633 Helix-hairpin-helix motif AMD13_RS08525 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD13_RS08535 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS08540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD13_RS08540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD13_RS08545 PF00293 NUDIX domain AMD13_RS08545 PF06945 AMD13_RS08545 AMD13_RS08550 PF00581 Rhodanese-like domain AMD13_RS08555 PF07920 Protein of unknown function (DUF1684) AMD13_RS08560 PF01510 N-acetylmuramoyl-L-alanine amidase AMD13_RS08565 PF03473 MOSC domain AMD13_RS08570 PF05728 Uncharacterised protein family (UPF0227) AMD13_RS08575 PF00583 Acetyltransferase (GNAT) family AMD13_RS08580 PF00005 ABC transporter AMD13_RS08585 PF01170 Putative RNA methylase family UPF0020 AMD13_RS08585 PF02926 THUMP domain AMD13_RS08585 PF10672 S-adenosylmethionine-dependent methyltransferase AMD13_RS08590 PF01513 ATP-NAD kinase AMD13_RS08595 PF06189 AMD13_RS08595 AMD13_RS08600 PF11159 AMD13_RS08600 AMD13_RS08610 PF09365 AMD13_RS08610 AMD13_RS08615 PF00929 Exonuclease AMD13_RS08615 PF08411 Exonuclease C-terminal AMD13_RS08620 PF01494 FAD binding domain AMD13_RS08625 PF00266 Aminotransferase class-V AMD13_RS08630 PF12805 AMD13_RS08630 AMD13_RS08630 PF13515 AMD13_RS08630 AMD13_RS08635 PF06052 3-hydroxyanthranilic acid dioxygenase AMD13_RS08640 PF00484 Carbonic anhydrase AMD13_RS08645 PF05838 Glycosyl hydrolase 108 AMD13_RS08645 PF09374 Predicted Peptidoglycan domain AMD13_RS08650 PF11655 AMD13_RS08650 AMD13_RS08655 PF11655 AMD13_RS08655 AMD13_RS08685 PF00072 Response regulator receiver domain AMD13_RS08685 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS08690 PF00161 Ribosome inactivating protein AMD13_RS08700 PF04299 Putative FMN-binding domain AMD13_RS08720 PF00152 tRNA synthetases class II (D, K and N) AMD13_RS08720 PF01336 OB-fold nucleic acid binding domain AMD13_RS08725 PF01521 Iron-sulphur cluster biosynthesis AMD13_RS08730 PF01250 Ribosomal protein S6 AMD13_RS08735 PF01084 Ribosomal protein S18 AMD13_RS08740 PF01281 Ribosomal protein L9, N-terminal domain AMD13_RS08740 PF03948 Ribosomal protein L9, C-terminal domain AMD13_RS08745 PF02463 RecF/RecN/SMC N terminal domain AMD13_RS08750 PF04354 ZipA, C-terminal FtsZ-binding domain AMD13_RS08760 PF00155 Aminotransferase class I and II AMD13_RS08765 PF00533 BRCA1 C Terminus (BRCT) domain AMD13_RS08765 PF01653 NAD-dependent DNA ligase adenylation domain AMD13_RS08765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD13_RS08765 PF03120 NAD-dependent DNA ligase OB-fold domain AMD13_RS08765 PF12826 Helix-hairpin-helix motif AMD13_RS08770 PF00152 tRNA synthetases class II (D, K and N) AMD13_RS08775 PF11218 AMD13_RS08775 AMD13_RS08780 PF01008 Initiation factor 2 subunit family AMD13_RS08785 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD13_RS08785 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD13_RS08800 PF01175 Urocanase AMD13_RS08805 PF05013 N-formylglutamate amidohydrolase AMD13_RS08810 PF00221 Aromatic amino acid lyase AMD13_RS08815 PF07969 Amidohydrolase family AMD13_RS08820 PF01979 Amidohydrolase family AMD13_RS08830 PF00392 Bacterial regulatory proteins, gntR family AMD13_RS08830 PF07702 UTRA domain AMD13_RS08835 PF04471 Restriction endonuclease AMD13_RS08845 PF05597 AMD13_RS08845 AMD13_RS08850 PF09650 AMD13_RS08850 AMD13_RS08855 PF16697 AMD13_RS08855 AMD13_RS08860 PF01794 AMD13_RS08860 AMD13_RS08865 PF00174 Oxidoreductase molybdopterin binding domain AMD13_RS08870 PF00266 Aminotransferase class-V AMD13_RS08875 PF00800 Prephenate dehydratase AMD13_RS08875 PF01817 Chorismate mutase type II AMD13_RS08875 PF01842 ACT domain AMD13_RS08880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD13_RS08885 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS08890 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS08895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD13_RS08895 PF02403 Seryl-tRNA synthetase N-terminal domain AMD13_RS08900 PF02525 Flavodoxin-like fold AMD13_RS08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS08905 PF03466 LysR substrate binding domain AMD13_RS08915 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD13_RS08935 PF01527 Transposase AMD13_RS08940 PF00665 Integrase core domain AMD13_RS08940 PF13276 AMD13_RS08940 AMD13_RS08945 PF02399 AMD13_RS08945 AMD13_RS08950 PF00589 Phage integrase family AMD13_RS08950 PF13356 Domain of unknown function (DUF4102) AMD13_RS08955 PF04343 AMD13_RS08955 AMD13_RS08960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS08960 PF00672 HAMP domain AMD13_RS08960 PF12729 AMD13_RS08960 AMD13_RS08965 PF01494 FAD binding domain AMD13_RS08970 PF01047 MarR family AMD13_RS08985 PF00072 Response regulator receiver domain AMD13_RS08985 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS08985 PF00989 PAS fold AMD13_RS08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS08985 PF08447 PAS fold AMD13_RS08985 PF08448 PAS fold AMD13_RS08990 PF00072 Response regulator receiver domain AMD13_RS08995 PF06745 KaiC AMD13_RS09000 PF00072 Response regulator receiver domain AMD13_RS09000 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS09000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS09000 PF08448 PAS fold AMD13_RS09010 PF03918 Cytochrome C biogenesis protein AMD13_RS09015 PF00578 AhpC/TSA family AMD13_RS09020 PF01578 AMD13_RS09020 AMD13_RS09020 PF16327 AMD13_RS09020 AMD13_RS09025 PF03100 CcmE AMD13_RS09030 PF04995 AMD13_RS09030 AMD13_RS09035 PF01578 AMD13_RS09035 AMD13_RS09040 PF00082 Subtilase family AMD13_RS09045 PF13490 Putative zinc-finger AMD13_RS09050 PF04542 Sigma-70 region 2 AMD13_RS09050 PF08281 Sigma-70, region 4 AMD13_RS09065 PF00034 Cytochrome c AMD13_RS09075 PF01292 Prokaryotic cytochrome b561 AMD13_RS09080 PF05523 WxcM-like, C-terminal AMD13_RS09085 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS09095 PF13480 Acetyltransferase (GNAT) domain AMD13_RS09100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD13_RS09105 PF13440 AMD13_RS09105 AMD13_RS09110 PF00535 Glycosyl transferase family 2 AMD13_RS09120 PF02706 Chain length determinant protein AMD13_RS09125 PF13649 Methyltransferase domain AMD13_RS09130 PF01979 Amidohydrolase family AMD13_RS09135 PF08241 Methyltransferase domain AMD13_RS09140 PF00534 Glycosyl transferases group 1 AMD13_RS09140 PF13439 Glycosyltransferase Family 4 AMD13_RS09145 PF00534 Glycosyl transferases group 1 AMD13_RS09145 PF13579 Glycosyl transferase 4-like domain AMD13_RS09150 PF14907 Uncharacterised nucleotidyltransferase AMD13_RS09155 PF04055 Radical SAM superfamily AMD13_RS09165 PF00005 ABC transporter AMD13_RS09165 PF00664 ABC transporter transmembrane region AMD13_RS09170 PF00083 Sugar (and other) transporter AMD13_RS09175 PF00296 Luciferase-like monooxygenase AMD13_RS09180 PF16242 AMD13_RS09180 AMD13_RS09185 PF06055 AMD13_RS09185 AMD13_RS09190 PF00571 CBS domain AMD13_RS09190 PF01595 AMD13_RS09190 AMD13_RS09190 PF03471 Transporter associated domain AMD13_RS09195 PF01865 Protein of unknown function DUF47 AMD13_RS09200 PF01384 AMD13_RS09200 AMD13_RS09205 PF02698 DUF218 domain AMD13_RS09210 PF00450 Serine carboxypeptidase AMD13_RS09215 PF00204 DNA gyrase B AMD13_RS09215 PF00986 DNA gyrase B subunit, carboxyl terminus AMD13_RS09215 PF01751 Toprim domain AMD13_RS09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS09225 PF00117 Glutamine amidotransferase class-I AMD13_RS09225 PF06418 CTP synthase N-terminus AMD13_RS09230 PF00793 DAHP synthetase I family AMD13_RS09240 PF00113 Enolase, C-terminal TIM barrel domain AMD13_RS09240 PF03952 Enolase, N-terminal domain AMD13_RS09245 PF04977 Septum formation initiator AMD13_RS09250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD13_RS09255 PF02542 YgbB family AMD13_RS09260 PF01142 tRNA pseudouridine synthase D (TruD) AMD13_RS09265 PF01713 Smr domain AMD13_RS09270 PF01975 Survival protein SurE AMD13_RS09275 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD13_RS09285 PF01476 LysM domain AMD13_RS09285 PF01551 Peptidase family M23 AMD13_RS09290 PF04430 Protein of unknown function (DUF498/DUF598) AMD13_RS09295 PF01985 CRS1 / YhbY (CRM) domain AMD13_RS09300 PF01728 FtsJ-like methyltransferase AMD13_RS09305 PF00004 ATPase family associated with various cellular activities (AAA) AMD13_RS09305 PF01434 Peptidase family M41 AMD13_RS09305 PF06480 FtsH Extracellular AMD13_RS09310 PF00809 Pterin binding enzyme AMD13_RS09315 PF01715 IPP transferase AMD13_RS09325 PF01926 50S ribosome-binding GTPase AMD13_RS09325 PF13167 AMD13_RS09325 AMD13_RS09325 PF16360 AMD13_RS09325 AMD13_RS09330 PF02464 Competence-damaged protein AMD13_RS09335 PF03109 AMD13_RS09335 AMD13_RS09340 PF00717 Peptidase S24-like AMD13_RS09340 PF01726 LexA DNA binding domain AMD13_RS09345 PF00154 recA bacterial DNA recombination protein AMD13_RS09350 PF02631 RecX family AMD13_RS09355 PF01411 tRNA synthetases class II (A) AMD13_RS09355 PF02272 DHHA1 domain AMD13_RS09355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD13_RS09360 PF02599 Global regulator protein family AMD13_RS09370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS09370 PF08447 PAS fold AMD13_RS09370 PF08448 PAS fold AMD13_RS09375 PF02678 Pirin AMD13_RS09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS09385 PF03466 LysR substrate binding domain AMD13_RS09390 PF00581 Rhodanese-like domain AMD13_RS09390 PF09335 AMD13_RS09390 AMD13_RS09405 PF12146 Putative lysophospholipase AMD13_RS09410 PF08543 Phosphomethylpyrimidine kinase AMD13_RS09415 PF06912 AMD13_RS09415 AMD13_RS09425 PF02562 PhoH-like protein AMD13_RS09425 PF13638 PIN domain AMD13_RS09430 PF00578 AhpC/TSA family AMD13_RS09435 PF06877 Regulator of ribonuclease activity B AMD13_RS09440 PF13740 ACT domain AMD13_RS09445 PF00701 Dihydrodipicolinate synthetase family AMD13_RS09455 PF00037 4Fe-4S binding domain AMD13_RS09455 PF11953 Domain of unknown function (DUF3470) AMD13_RS09460 PF05035 2-keto-3-deoxy-galactonokinase AMD13_RS09465 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD13_RS09470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD13_RS09470 PF13378 Enolase C-terminal domain-like AMD13_RS09475 PF01081 KDPG and KHG aldolase AMD13_RS09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS09485 PF03466 LysR substrate binding domain AMD13_RS09490 PF00593 TonB dependent receptor AMD13_RS09490 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS09495 PF00593 TonB dependent receptor AMD13_RS09495 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS09505 PF03629 Domain of unknown function (DUF303) AMD13_RS09505 PF13364 Beta-galactosidase jelly roll domain AMD13_RS09510 PF02449 Beta-galactosidase AMD13_RS09515 PF01055 Glycosyl hydrolases family 31 AMD13_RS09515 PF07691 PA14 domain AMD13_RS09515 PF16338 AMD13_RS09515 AMD13_RS09515 PF17137 AMD13_RS09515 AMD13_RS09520 PF14498 Glycosyl hydrolase family 65, N-terminal domain AMD13_RS09525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD13_RS09525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD13_RS09535 PF00083 Sugar (and other) transporter AMD13_RS09540 PF05231 AMD13_RS09540 AMD13_RS09545 PF01520 N-acetylmuramoyl-L-alanine amidase AMD13_RS09545 PF11741 AMIN domain AMD13_RS09550 PF02649 Type I GTP cyclohydrolase folE2 AMD13_RS09560 PF01743 Poly A polymerase head domain AMD13_RS09560 PF12626 Polymerase A arginine-rich C-terminus AMD13_RS09560 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD13_RS09565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD13_RS09570 PF02548 Ketopantoate hydroxymethyltransferase AMD13_RS09575 PF02569 Pantoate-beta-alanine ligase AMD13_RS09580 PF02261 Aspartate decarboxylase AMD13_RS09585 PF00342 Phosphoglucose isomerase AMD13_RS09590 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMD13_RS09600 PF05787 Bacterial protein of unknown function (DUF839) AMD13_RS09605 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD13_RS09605 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD13_RS09610 PF00474 Sodium:solute symporter family AMD13_RS09615 PF00563 EAL domain AMD13_RS09615 PF00990 GGDEF domain AMD13_RS09615 PF01590 GAF domain AMD13_RS09620 PF00150 Cellulase (glycosyl hydrolase family 5) AMD13_RS09625 PF00072 Response regulator receiver domain AMD13_RS09625 PF02954 Bacterial regulatory protein, Fis family AMD13_RS09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS09635 PF04551 GcpE protein AMD13_RS09640 PF01569 PAP2 superfamily AMD13_RS09645 PF07690 Major Facilitator Superfamily AMD13_RS09650 PF01177 Asp/Glu/Hydantoin racemase AMD13_RS09655 PF00892 EamA-like transporter family AMD13_RS09660 PF01565 FAD binding domain AMD13_RS09660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD13_RS09665 PF01180 Dihydroorotate dehydrogenase AMD13_RS09670 PF08241 Methyltransferase domain AMD13_RS09675 PF13828 AMD13_RS09675 AMD13_RS09680 PF00171 Aldehyde dehydrogenase family AMD13_RS09690 PF13994 AMD13_RS09690 AMD13_RS09695 PF13641 Glycosyltransferase like family 2 AMD13_RS09700 PF01522 Polysaccharide deacetylase AMD13_RS09700 PF14883 Hypothetical glycosyl hydrolase family 13 AMD13_RS09705 PF13432 Tetratricopeptide repeat AMD13_RS09705 PF14559 Tetratricopeptide repeat AMD13_RS09710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD13_RS09710 PF08479 POTRA domain, ShlB-type AMD13_RS09715 PF05594 AMD13_RS09715 AMD13_RS09715 PF05860 haemagglutination activity domain AMD13_RS09715 PF13332 AMD13_RS09715 AMD13_RS09720 PF05594 AMD13_RS09720 AMD13_RS09720 PF13332 AMD13_RS09720 AMD13_RS09725 PF05594 AMD13_RS09725 AMD13_RS09730 PF03073 TspO/MBR family AMD13_RS09735 PF00696 Amino acid kinase family AMD13_RS09735 PF00742 Homoserine dehydrogenase AMD13_RS09735 PF03447 Homoserine dehydrogenase, NAD binding domain AMD13_RS09735 PF13840 ACT domain AMD13_RS09740 PF00288 GHMP kinases N terminal domain AMD13_RS09740 PF08544 GHMP kinases C terminal AMD13_RS09745 PF07110 EthD domain AMD13_RS09750 PF00291 Pyridoxal-phosphate dependent enzyme AMD13_RS09750 PF14821 Threonine synthase N terminus AMD13_RS09755 PF13645 AMD13_RS09755 AMD13_RS09760 PF00027 Cyclic nucleotide-binding domain AMD13_RS09760 PF13545 Crp-like helix-turn-helix domain AMD13_RS09765 PF03129 Anticodon binding domain AMD13_RS09765 PF13393 Histidyl-tRNA synthetase AMD13_RS09770 PF01371 Trp repressor protein AMD13_RS09775 PF01634 ATP phosphoribosyltransferase AMD13_RS09775 PF08029 HisG, C-terminal domain AMD13_RS09780 PF00815 Histidinol dehydrogenase AMD13_RS09785 PF00155 Aminotransferase class I and II AMD13_RS09790 PF00475 Imidazoleglycerol-phosphate dehydratase AMD13_RS09790 PF13242 HAD-hyrolase-like AMD13_RS09795 PF00117 Glutamine amidotransferase class-I AMD13_RS09800 PF00977 Histidine biosynthesis protein AMD13_RS09805 PF00977 Histidine biosynthesis protein AMD13_RS09810 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD13_RS09810 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD13_RS09815 PF00149 Calcineurin-like phosphoesterase AMD13_RS09815 PF16370 AMD13_RS09815 AMD13_RS09815 PF16371 AMD13_RS09815 AMD13_RS09820 PF01650 Peptidase C13 family AMD13_RS09830 PF03079 ARD/ARD' family AMD13_RS09835 PF00596 Class II Aldolase and Adducin N-terminal domain AMD13_RS09840 PF13520 Amino acid permease AMD13_RS09845 PF13520 Amino acid permease AMD13_RS09850 PF00293 NUDIX domain AMD13_RS09855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD13_RS09855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD13_RS09860 PF01565 FAD binding domain AMD13_RS09860 PF02913 FAD linked oxidases, C-terminal domain AMD13_RS09865 PF09498 AMD13_RS09865 AMD13_RS09870 PF13387 AMD13_RS09870 AMD13_RS09880 PF01132 Elongation factor P (EF-P) OB domain AMD13_RS09880 PF08207 Elongation factor P (EF-P) KOW-like domain AMD13_RS09880 PF09285 Elongation factor P, C-terminal AMD13_RS09885 PF00106 short chain dehydrogenase AMD13_RS09890 PF00682 HMGL-like AMD13_RS09895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS09900 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS09905 PF04023 FeoA domain AMD13_RS09910 PF02421 Ferrous iron transport protein B AMD13_RS09910 PF07664 AMD13_RS09910 AMD13_RS09910 PF07670 Nucleoside recognition AMD13_RS09925 PF00155 Aminotransferase class I and II AMD13_RS09930 PF03473 MOSC domain AMD13_RS09930 PF03475 3-alpha domain AMD13_RS09935 PF01113 Dihydrodipicolinate reductase, N-terminus AMD13_RS09935 PF05173 Dihydrodipicolinate reductase, C-terminus AMD13_RS09940 PF00117 Glutamine amidotransferase class-I AMD13_RS09940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD13_RS09950 PF02142 MGS-like domain AMD13_RS09950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD13_RS09950 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD13_RS09955 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD13_RS09955 PF03449 Transcription elongation factor, N-terminal AMD13_RS09965 PF01368 DHH family AMD13_RS09965 PF02272 DHHA1 domain AMD13_RS09970 PF05593 AMD13_RS09970 AMD13_RS09980 PF15649 AMD13_RS09980 AMD13_RS09995 PF13683 AMD13_RS09995 AMD13_RS10005 PF01757 AMD13_RS10005 AMD13_RS10010 PF04397 LytTr DNA-binding domain AMD13_RS10015 PF00472 RF-1 domain AMD13_RS10015 PF03462 PCRF domain AMD13_RS10020 PF00152 tRNA synthetases class II (D, K and N) AMD13_RS10020 PF01336 OB-fold nucleic acid binding domain AMD13_RS10025 PF00072 Response regulator receiver domain AMD13_RS10025 PF01966 HD domain AMD13_RS10030 PF00072 Response regulator receiver domain AMD13_RS10030 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS10030 PF01627 Hpt domain AMD13_RS10030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS10035 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS10040 PF00501 AMP-binding enzyme AMD13_RS10040 PF13193 AMP-binding enzyme C-terminal domain AMD13_RS10050 PF00330 Aconitase family (aconitate hydratase) AMD13_RS10050 PF00694 Aconitase C-terminal domain AMD13_RS10055 PF04014 Antidote-toxin recognition MazE AMD13_RS10060 PF01850 PIN domain AMD13_RS10065 PF00330 Aconitase family (aconitate hydratase) AMD13_RS10065 PF06434 Aconitate hydratase 2 N-terminus AMD13_RS10065 PF11791 Aconitate B N-terminal domain AMD13_RS10070 PF00561 alpha/beta hydrolase fold AMD13_RS10075 PF00563 EAL domain AMD13_RS10075 PF00990 GGDEF domain AMD13_RS10075 PF13185 GAF domain AMD13_RS10075 PF13426 PAS domain AMD13_RS10080 PF00072 Response regulator receiver domain AMD13_RS10080 PF01339 CheB methylesterase AMD13_RS10085 PF03975 CheD chemotactic sensory transduction AMD13_RS10090 PF01739 CheR methyltransferase, SAM binding domain AMD13_RS10090 PF03705 CheR methyltransferase, all-alpha domain AMD13_RS10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10095 PF00672 HAMP domain AMD13_RS10095 PF12729 AMD13_RS10095 AMD13_RS10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10100 PF00672 HAMP domain AMD13_RS10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10105 PF00672 HAMP domain AMD13_RS10105 PF12729 AMD13_RS10105 AMD13_RS10115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10115 PF00672 HAMP domain AMD13_RS10115 PF05227 CHASE3 domain AMD13_RS10120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10120 PF00672 HAMP domain AMD13_RS10120 PF12729 AMD13_RS10120 AMD13_RS10125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10125 PF00672 HAMP domain AMD13_RS10125 PF12729 AMD13_RS10125 AMD13_RS10130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10135 PF13557 AMD13_RS10135 AMD13_RS10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10145 PF00672 HAMP domain AMD13_RS10145 PF02743 Cache domain AMD13_RS10150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10150 PF00672 HAMP domain AMD13_RS10150 PF17200 AMD13_RS10150 AMD13_RS10160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10160 PF00672 HAMP domain AMD13_RS10160 PF12729 AMD13_RS10160 AMD13_RS10165 PF01584 CheW-like domain AMD13_RS10165 PF01627 Hpt domain AMD13_RS10165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS10165 PF02895 Signal transducing histidine kinase, homodimeric domain AMD13_RS10170 PF00072 Response regulator receiver domain AMD13_RS10175 PF13466 STAS domain AMD13_RS10180 PF01584 CheW-like domain AMD13_RS10185 PF13614 AAA domain AMD13_RS10190 PF00691 OmpA family AMD13_RS10190 PF13677 AMD13_RS10190 AMD13_RS10195 PF01618 AMD13_RS10195 AMD13_RS10205 PF00593 TonB dependent receptor AMD13_RS10205 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS10210 PF00069 Protein kinase domain AMD13_RS10225 PF08845 AMD13_RS10225 AMD13_RS10235 PF01609 Transposase DDE domain AMD13_RS10245 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD13_RS10250 PF13333 AMD13_RS10250 AMD13_RS10260 PF01527 Transposase AMD13_RS10265 PF13683 AMD13_RS10265 AMD13_RS10270 PF01381 Helix-turn-helix AMD13_RS10280 PF04055 Radical SAM superfamily AMD13_RS10280 PF13353 4Fe-4S single cluster domain AMD13_RS10290 PF01609 Transposase DDE domain AMD13_RS10295 PF01584 CheW-like domain AMD13_RS10295 PF01627 Hpt domain AMD13_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS10295 PF02895 Signal transducing histidine kinase, homodimeric domain AMD13_RS10300 PF04344 Chemotaxis phosphatase, CheZ AMD13_RS10305 PF00072 Response regulator receiver domain AMD13_RS10310 PF04539 Sigma-70 region 3 AMD13_RS10310 PF04542 Sigma-70 region 2 AMD13_RS10310 PF04545 Sigma-70, region 4 AMD13_RS10315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD13_RS10320 PF00448 SRP54-type protein, GTPase domain AMD13_RS10325 PF00771 FHIPEP family AMD13_RS10330 PF01312 FlhB HrpN YscU SpaS Family AMD13_RS10335 PF00563 EAL domain AMD13_RS10335 PF00990 GGDEF domain AMD13_RS10335 PF03707 AMD13_RS10335 AMD13_RS10340 PF00990 GGDEF domain AMD13_RS10345 PF07495 Y_Y_Y domain AMD13_RS10350 PF00990 GGDEF domain AMD13_RS10350 PF07494 Two component regulator propeller AMD13_RS10350 PF07495 Y_Y_Y domain AMD13_RS10355 PF01311 AMD13_RS10355 AMD13_RS10360 PF01313 AMD13_RS10360 AMD13_RS10365 PF00813 AMD13_RS10365 AMD13_RS10370 PF04347 AMD13_RS10370 AMD13_RS10375 PF01052 Surface presentation of antigens (SPOA) AMD13_RS10380 PF01052 Surface presentation of antigens (SPOA) AMD13_RS10380 PF02154 Flagellar motor switch protein FliM AMD13_RS10385 PF03748 AMD13_RS10385 AMD13_RS10390 PF02120 Flagellar hook-length control protein FliK AMD13_RS10395 PF02050 Flagellar FliJ protein AMD13_RS10400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD13_RS10405 PF02108 AMD13_RS10405 AMD13_RS10410 PF01706 FliG C-terminal domain AMD13_RS10410 PF14841 FliG middle domain AMD13_RS10410 PF14842 FliG N-terminal domain AMD13_RS10415 PF01514 Secretory protein of YscJ/FliF family AMD13_RS10415 PF08345 AMD13_RS10415 AMD13_RS10420 PF02049 AMD13_RS10420 AMD13_RS10425 PF00535 Glycosyl transferase family 2 AMD13_RS10430 PF05050 Methyltransferase FkbM domain AMD13_RS10435 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS10440 PF00355 Rieske [2Fe-2S] domain AMD13_RS10440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMD13_RS10445 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS10445 PF14602 Hexapeptide repeat of succinyl-transferase AMD13_RS10450 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS10455 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS10460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD13_RS10460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD13_RS10470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD13_RS10475 PF00158 Sigma-54 interaction domain AMD13_RS10475 PF02954 Bacterial regulatory protein, Fis family AMD13_RS10475 PF06490 AMD13_RS10475 AMD13_RS10480 PF00072 Response regulator receiver domain AMD13_RS10485 PF00309 AMD13_RS10485 AMD13_RS10485 PF04552 Sigma-54, DNA binding domain AMD13_RS10485 PF04963 Sigma-54 factor, core binding domain AMD13_RS10490 PF00072 Response regulator receiver domain AMD13_RS10490 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS10495 PF16823 AMD13_RS10495 AMD13_RS10505 PF02561 Flagellar protein FliS AMD13_RS10510 PF02465 AMD13_RS10510 AMD13_RS10510 PF07195 AMD13_RS10510 AMD13_RS10510 PF07196 Flagellin hook IN motif AMD13_RS10515 PF00669 Bacterial flagellin N-terminal helical region AMD13_RS10515 PF00700 Bacterial flagellin C-terminal helical region AMD13_RS10515 PF07196 Flagellin hook IN motif AMD13_RS10520 PF00669 Bacterial flagellin N-terminal helical region AMD13_RS10520 PF00700 Bacterial flagellin C-terminal helical region AMD13_RS10525 PF00460 Flagella basal body rod protein AMD13_RS10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD13_RS10530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD13_RS10530 PF10135 AMD13_RS10530 AMD13_RS10535 PF02119 AMD13_RS10535 AMD13_RS10540 PF02107 AMD13_RS10540 AMD13_RS10545 PF00460 Flagella basal body rod protein AMD13_RS10545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD13_RS10550 PF00460 Flagella basal body rod protein AMD13_RS10550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD13_RS10555 PF00460 Flagella basal body rod protein AMD13_RS10555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD13_RS10555 PF07559 Flagellar basal body protein FlaE AMD13_RS10560 PF03963 AMD13_RS10560 AMD13_RS10560 PF13860 FlgD Ig-like domain AMD13_RS10560 PF13861 FlgD Tudor-like domain AMD13_RS10565 PF00460 Flagella basal body rod protein AMD13_RS10565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD13_RS10570 PF00460 Flagella basal body rod protein AMD13_RS10575 PF00072 Response regulator receiver domain AMD13_RS10575 PF01584 CheW-like domain AMD13_RS10580 PF13144 SAF-like AMD13_RS10585 PF04316 Anti-sigma-28 factor, FlgM AMD13_RS10595 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS10600 PF00072 Response regulator receiver domain AMD13_RS10600 PF00563 EAL domain AMD13_RS10600 PF00990 GGDEF domain AMD13_RS10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS10605 PF07730 Histidine kinase AMD13_RS10605 PF08448 PAS fold AMD13_RS10605 PF13426 PAS domain AMD13_RS10610 PF00563 EAL domain AMD13_RS10610 PF00990 GGDEF domain AMD13_RS10610 PF08447 PAS fold AMD13_RS10610 PF13426 PAS domain AMD13_RS10620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS10625 PF04356 Protein of unknown function (DUF489) AMD13_RS10630 PF03054 tRNA methyl transferase AMD13_RS10635 PF00293 NUDIX domain AMD13_RS10640 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD13_RS10645 PF00004 ATPase family associated with various cellular activities (AAA) AMD13_RS10645 PF02861 Clp amino terminal domain AMD13_RS10645 PF07724 AAA domain (Cdc48 subfamily) AMD13_RS10645 PF10431 C-terminal, D2-small domain, of ClpB protein AMD13_RS10650 PF01176 Translation initiation factor 1A / IF-1 AMD13_RS10655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD13_RS10660 PF04339 AMD13_RS10660 AMD13_RS10665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS10670 PF01580 FtsK/SpoIIIE family AMD13_RS10670 PF09397 Ftsk gamma domain AMD13_RS10670 PF13491 AMD13_RS10670 AMD13_RS10675 PF01841 Transglutaminase-like superfamily AMD13_RS10675 PF12969 Domain of Unknown Function with PDB structure (DUF3857) AMD13_RS10680 PF03548 Outer membrane lipoprotein carrier protein LolA AMD13_RS10690 PF00004 ATPase family associated with various cellular activities (AAA) AMD13_RS10690 PF12002 MgsA AAA+ ATPase C terminal AMD13_RS10690 PF16193 AMD13_RS10690 AMD13_RS10695 PF02537 AMD13_RS10695 AMD13_RS10705 PF00108 Thiolase, N-terminal domain AMD13_RS10705 PF02803 Thiolase, C-terminal domain AMD13_RS10710 PF00378 Enoyl-CoA hydratase/isomerase family AMD13_RS10710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD13_RS10710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD13_RS10715 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS10720 PF00334 Nucleoside diphosphate kinase AMD13_RS10725 PF04055 Radical SAM superfamily AMD13_RS10730 PF13432 Tetratricopeptide repeat AMD13_RS10735 PF13413 Helix-turn-helix domain AMD13_RS10735 PF13464 AMD13_RS10735 AMD13_RS10740 PF09976 Tetratricopeptide repeat AMD13_RS10745 PF13360 PQQ-like domain AMD13_RS10750 PF01926 50S ribosome-binding GTPase AMD13_RS10750 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD13_RS10755 PF00994 Probable molybdopterin binding domain AMD13_RS10755 PF03453 MoeA N-terminal region (domain I and II) AMD13_RS10755 PF03454 MoeA C-terminal region (domain IV) AMD13_RS10760 PF00581 Rhodanese-like domain AMD13_RS10760 PF00899 ThiF family AMD13_RS10765 PF00593 TonB dependent receptor AMD13_RS10765 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS10775 PF13628 AMD13_RS10775 AMD13_RS10785 PF00107 Zinc-binding dehydrogenase AMD13_RS10785 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS10785 PF13823 Alcohol dehydrogenase GroES-associated AMD13_RS10790 PF06884 AMD13_RS10790 AMD13_RS10795 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS10800 PF04193 PQ loop repeat AMD13_RS10805 PF00994 Probable molybdopterin binding domain AMD13_RS10805 PF03453 MoeA N-terminal region (domain I and II) AMD13_RS10805 PF03454 MoeA C-terminal region (domain IV) AMD13_RS10810 PF12804 MobA-like NTP transferase domain AMD13_RS10820 PF00561 alpha/beta hydrolase fold AMD13_RS10825 PF01566 AMD13_RS10825 AMD13_RS10830 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD13_RS10830 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD13_RS10835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD13_RS10840 PF00929 Exonuclease AMD13_RS10845 PF00924 Mechanosensitive ion channel AMD13_RS10850 PF00391 PEP-utilising enzyme, mobile domain AMD13_RS10850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD13_RS10850 PF02896 PEP-utilising enzyme, TIM barrel domain AMD13_RS10855 PF03618 AMD13_RS10855 AMD13_RS10860 PF06853 AMD13_RS10860 AMD13_RS10865 PF00293 NUDIX domain AMD13_RS10870 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS10875 PF01066 CDP-alcohol phosphatidyltransferase AMD13_RS10880 PF09712 AMD13_RS10880 AMD13_RS10885 PF00561 alpha/beta hydrolase fold AMD13_RS10890 PF04024 AMD13_RS10890 AMD13_RS10900 PF01266 FAD dependent oxidoreductase AMD13_RS10910 PF00575 S1 RNA binding domain AMD13_RS10910 PF09371 Tex-like protein N-terminal domain AMD13_RS10910 PF12836 Helix-hairpin-helix motif AMD13_RS10910 PF16921 AMD13_RS10910 AMD13_RS10915 PF00072 Response regulator receiver domain AMD13_RS10915 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS10915 PF01590 GAF domain AMD13_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS10915 PF08447 PAS fold AMD13_RS10915 PF08448 PAS fold AMD13_RS10915 PF13185 GAF domain AMD13_RS10955 PF00034 Cytochrome c AMD13_RS10960 PF00034 Cytochrome c AMD13_RS10965 PF00529 HlyD family secretion protein AMD13_RS10965 PF16576 AMD13_RS10965 AMD13_RS10970 PF00873 AcrB/AcrD/AcrF family AMD13_RS10975 PF00873 AcrB/AcrD/AcrF family AMD13_RS10980 PF01081 KDPG and KHG aldolase AMD13_RS10985 PF00920 Dehydratase family AMD13_RS10990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD13_RS10995 PF02685 Glucokinase AMD13_RS11000 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD13_RS11000 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD13_RS11005 PF00005 ABC transporter AMD13_RS11005 PF08402 TOBE domain AMD13_RS11010 PF01571 Aminomethyltransferase folate-binding domain AMD13_RS11010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD13_RS11015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD13_RS11020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD13_RS11025 PF00890 FAD binding domain AMD13_RS11025 PF02910 Fumarate reductase flavoprotein C-term AMD13_RS11035 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD13_RS11035 PF13534 4Fe-4S dicluster domain AMD13_RS11040 PF03937 Flavinator of succinate dehydrogenase AMD13_RS11050 PF02687 AMD13_RS11050 AMD13_RS11050 PF12704 MacB-like periplasmic core domain AMD13_RS11055 PF00005 ABC transporter AMD13_RS11060 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS11065 PF00753 Metallo-beta-lactamase superfamily AMD13_RS11065 PF03772 AMD13_RS11065 AMD13_RS11065 PF13567 AMD13_RS11065 AMD13_RS11070 PF01618 AMD13_RS11070 AMD13_RS11075 PF02472 Biopolymer transport protein ExbD/TolR AMD13_RS11080 PF00005 ABC transporter AMD13_RS11080 PF00664 ABC transporter transmembrane region AMD13_RS11085 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD13_RS11090 PF02348 Cytidylyltransferase AMD13_RS11095 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD13_RS11100 PF01436 NHL repeat AMD13_RS11105 PF01541 GIY-YIG catalytic domain AMD13_RS11105 PF02151 UvrB/uvrC motif AMD13_RS11105 PF08459 UvrC Helix-hairpin-helix N-terminal AMD13_RS11110 PF01066 CDP-alcohol phosphatidyltransferase AMD13_RS11130 PF00501 AMP-binding enzyme AMD13_RS11130 PF00550 Phosphopantetheine attachment site AMD13_RS11130 PF00668 Condensation domain AMD13_RS11130 PF13193 AMP-binding enzyme C-terminal domain AMD13_RS11135 PF00501 AMP-binding enzyme AMD13_RS11135 PF00550 Phosphopantetheine attachment site AMD13_RS11135 PF00668 Condensation domain AMD13_RS11135 PF00975 Thioesterase domain AMD13_RS11135 PF13193 AMP-binding enzyme C-terminal domain AMD13_RS11140 PF00665 Integrase core domain AMD13_RS11145 PF01527 Transposase AMD13_RS11150 PF00665 Integrase core domain AMD13_RS11150 PF13276 AMD13_RS11150 AMD13_RS11155 PF01527 Transposase AMD13_RS11165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD13_RS11165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD13_RS11165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD13_RS11170 PF03486 HI0933-like protein AMD13_RS11175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD13_RS11185 PF00581 Rhodanese-like domain AMD13_RS11190 PF00072 Response regulator receiver domain AMD13_RS11190 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS11195 PF00575 S1 RNA binding domain AMD13_RS11195 PF10150 Ribonuclease E/G family AMD13_RS11200 PF00849 RNA pseudouridylate synthase AMD13_RS11200 PF01479 S4 domain AMD13_RS11205 PF11737 AMD13_RS11205 AMD13_RS11210 PF02535 AMD13_RS11210 AMD13_RS11215 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS11220 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD13_RS11225 PF01106 NifU-like domain AMD13_RS11225 PF01521 Iron-sulphur cluster biosynthesis AMD13_RS11240 PF04940 Sensors of blue-light using FAD AMD13_RS11245 PF01596 O-methyltransferase AMD13_RS11250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS11255 PF02585 GlcNAc-PI de-N-acetylase AMD13_RS11260 PF05401 Nodulation protein S (NodS) AMD13_RS11265 PF00535 Glycosyl transferase family 2 AMD13_RS11275 PF00732 GMC oxidoreductase AMD13_RS11275 PF05199 GMC oxidoreductase AMD13_RS11280 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS11285 PF12375 AMD13_RS11285 AMD13_RS11295 PF13333 AMD13_RS11295 AMD13_RS11305 PF01527 Transposase AMD13_RS11315 PF09335 AMD13_RS11315 AMD13_RS11335 PF07995 Glucose / Sorbosone dehydrogenase AMD13_RS11345 PF00144 Beta-lactamase AMD13_RS11350 PF00072 Response regulator receiver domain AMD13_RS11350 PF04397 LytTr DNA-binding domain AMD13_RS11355 PF06580 AMD13_RS11355 AMD13_RS11370 PF00082 Subtilase family AMD13_RS11370 PF03797 Autotransporter beta-domain AMD13_RS11370 PF12951 AMD13_RS11370 AMD13_RS11375 PF16576 AMD13_RS11375 AMD13_RS11380 PF00873 AcrB/AcrD/AcrF family AMD13_RS11385 PF02321 Outer membrane efflux protein AMD13_RS11390 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS11395 PF00072 Response regulator receiver domain AMD13_RS11395 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS11400 PF12951 AMD13_RS11400 AMD13_RS11400 PF13018 AMD13_RS11400 AMD13_RS11405 PF00563 EAL domain AMD13_RS11410 PF07081 Protein of unknown function (DUF1349) AMD13_RS11415 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMD13_RS11420 PF05974 Domain of unknown function (DUF892) AMD13_RS11425 PF10685 AMD13_RS11425 AMD13_RS11430 PF00072 Response regulator receiver domain AMD13_RS11435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD13_RS11435 PF10414 Sirohaem synthase dimerisation region AMD13_RS11435 PF13241 Putative NAD(P)-binding AMD13_RS11435 PF14824 Sirohaem biosynthesis protein central AMD13_RS11450 PF05977 Transmembrane secretion effector AMD13_RS11460 PF07969 Amidohydrolase family AMD13_RS11465 PF07681 AMD13_RS11465 AMD13_RS11470 PF00857 Isochorismatase family AMD13_RS11475 PF12833 Helix-turn-helix domain AMD13_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS11480 PF07495 Y_Y_Y domain AMD13_RS11480 PF07730 Histidine kinase AMD13_RS11485 PF00072 Response regulator receiver domain AMD13_RS11485 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS11490 PF00672 HAMP domain AMD13_RS11490 PF17201 AMD13_RS11490 AMD13_RS11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS11505 PF03466 LysR substrate binding domain AMD13_RS11510 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD13_RS11510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD13_RS11515 PF10070 AMD13_RS11515 AMD13_RS11525 PF01527 Transposase AMD13_RS11530 PF13560 Helix-turn-helix domain AMD13_RS11535 PF05284 AMD13_RS11535 AMD13_RS11540 PF04002 RadC-like JAB domain AMD13_RS11545 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD13_RS11555 PF08843 Nucleotidyl transferase of unknown function (DUF1814) AMD13_RS11560 PF11459 AMD13_RS11560 AMD13_RS11560 PF17194 AMD13_RS11560 AMD13_RS11565 PF00589 Phage integrase family AMD13_RS11565 PF13356 Domain of unknown function (DUF4102) AMD13_RS11565 PF14659 Phage integrase, N-terminal SAM-like domain AMD13_RS11580 PF00593 TonB dependent receptor AMD13_RS11580 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS11585 PF07916 AMD13_RS11585 AMD13_RS11590 PF01850 PIN domain AMD13_RS11595 PF04014 Antidote-toxin recognition MazE AMD13_RS11600 PF16263 AMD13_RS11600 AMD13_RS11610 PF04542 Sigma-70 region 2 AMD13_RS11610 PF08281 Sigma-70, region 4 AMD13_RS11615 PF04773 FecR protein AMD13_RS11615 PF16220 AMD13_RS11615 AMD13_RS11620 PF00593 TonB dependent receptor AMD13_RS11620 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS11630 PF10947 AMD13_RS11630 AMD13_RS11635 PF07514 Putative helicase AMD13_RS11635 PF07515 Protein of unknown function (DUF1528) AMD13_RS11640 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD13_RS11640 PF05345 Putative Ig domain AMD13_RS11640 PF06594 AMD13_RS11640 AMD13_RS11645 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AMD13_RS11655 PF13437 HlyD family secretion protein AMD13_RS11655 PF13533 Biotin-lipoyl like AMD13_RS11660 PF00005 ABC transporter AMD13_RS11660 PF00664 ABC transporter transmembrane region AMD13_RS11665 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD13_RS11670 PF13614 AAA domain AMD13_RS11685 PF11198 AMD13_RS11685 AMD13_RS11695 PF08900 AMD13_RS11695 AMD13_RS11705 PF00436 Single-strand binding protein family AMD13_RS11715 PF00145 C-5 cytosine-specific DNA methylase AMD13_RS11725 PF13304 AAA domain AMD13_RS11755 PF11284 AMD13_RS11755 AMD13_RS11760 PF00589 Phage integrase family AMD13_RS11760 PF13356 Domain of unknown function (DUF4102) AMD13_RS11760 PF14659 Phage integrase, N-terminal SAM-like domain AMD13_RS11765 PF06250 AMD13_RS11765 AMD13_RS11770 PF01527 Transposase AMD13_RS11780 PF13333 AMD13_RS11780 AMD13_RS11785 PF00892 EamA-like transporter family AMD13_RS11790 PF00892 EamA-like transporter family AMD13_RS11795 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS11800 PF02525 Flavodoxin-like fold AMD13_RS11805 PF00043 Glutathione S-transferase, C-terminal domain AMD13_RS11805 PF13417 Glutathione S-transferase, N-terminal domain AMD13_RS11810 PF05544 Proline racemase AMD13_RS11815 PF03358 NADPH-dependent FMN reductase AMD13_RS11815 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease AMD13_RS11820 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS11825 PF07690 Major Facilitator Superfamily AMD13_RS11830 PF12833 Helix-turn-helix domain AMD13_RS11835 PF12101 AMD13_RS11835 AMD13_RS11840 PF11679 AMD13_RS11840 AMD13_RS11870 PF00271 Helicase conserved C-terminal domain AMD13_RS11885 PF07791 AMD13_RS11885 AMD13_RS11940 PF01464 Transglycosylase SLT domain AMD13_RS11945 PF11072 AMD13_RS11945 AMD13_RS11950 PF12696 TraM recognition site of TraD and TraG AMD13_RS11955 PF14348 AMD13_RS11955 AMD13_RS11960 PF12532 AMD13_RS11960 AMD13_RS11960 PF13476 AAA domain AMD13_RS11980 PF00580 UvrD/REP helicase N-terminal domain AMD13_RS11980 PF13361 UvrD-like helicase C-terminal domain AMD13_RS12005 PF09686 AMD13_RS12005 AMD13_RS12010 PF11660 AMD13_RS12010 AMD13_RS12015 PF11190 AMD13_RS12015 AMD13_RS12020 PF11990 AMD13_RS12020 AMD13_RS12025 PF11444 AMD13_RS12025 AMD13_RS12030 PF11920 AMD13_RS12030 AMD13_RS12045 PF11130 AMD13_RS12045 AMD13_RS12050 PF13462 Thioredoxin AMD13_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS12055 PF03466 LysR substrate binding domain AMD13_RS12060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD13_RS12060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD13_RS12065 PF03401 Tripartite tricarboxylate transporter family receptor AMD13_RS12070 PF06684 Amino acid synthesis AMD13_RS12080 PF04002 RadC-like JAB domain AMD13_RS12085 PF07511 AMD13_RS12085 AMD13_RS12090 PF06834 AMD13_RS12090 AMD13_RS12100 PF01507 Phosphoadenosine phosphosulfate reductase family AMD13_RS12110 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD13_RS12115 PF00589 Phage integrase family AMD13_RS12115 PF13356 Domain of unknown function (DUF4102) AMD13_RS12115 PF14659 Phage integrase, N-terminal SAM-like domain AMD13_RS12120 PF00117 Glutamine amidotransferase class-I AMD13_RS12120 PF00958 GMP synthase C terminal domain AMD13_RS12120 PF02540 NAD synthase AMD13_RS12125 PF00478 IMP dehydrogenase / GMP reductase domain AMD13_RS12125 PF00571 CBS domain AMD13_RS12130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD13_RS12130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD13_RS12135 PF06844 Protein of unknown function (DUF1244) AMD13_RS12140 PF00999 Sodium/hydrogen exchanger family AMD13_RS12140 PF02254 TrkA-N domain AMD13_RS12145 PF00483 Nucleotidyl transferase AMD13_RS12150 PF02719 Polysaccharide biosynthesis protein AMD13_RS12150 PF13727 CoA-binding domain AMD13_RS12155 PF00953 Glycosyl transferase family 4 AMD13_RS12160 PF13432 Tetratricopeptide repeat AMD13_RS12165 PF06305 AMD13_RS12165 AMD13_RS12170 PF00216 Bacterial DNA-binding protein AMD13_RS12175 PF00575 S1 RNA binding domain AMD13_RS12180 PF02224 Cytidylate kinase AMD13_RS12185 PF00444 Ribosomal protein L36 AMD13_RS12195 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD13_RS12200 PF00795 Carbon-nitrogen hydrolase AMD13_RS12205 PF13420 Acetyltransferase (GNAT) domain AMD13_RS12210 PF01963 AMD13_RS12210 AMD13_RS12215 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS12220 PF00754 F5/8 type C domain AMD13_RS12220 PF06202 Amylo-alpha-1,6-glucosidase AMD13_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS12235 PF13416 Bacterial extracellular solute-binding protein AMD13_RS12240 PF10091 Putative glucoamylase AMD13_RS12245 PF13620 Carboxypeptidase regulatory-like domain AMD13_RS12250 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS12250 PF13377 Periplasmic binding protein-like domain AMD13_RS12255 PF01722 BolA-like protein AMD13_RS12260 PF03795 YCII-related domain AMD13_RS12265 PF02616 ScpA/B protein AMD13_RS12270 PF04079 Putative transcriptional regulators (Ypuh-like) AMD13_RS12275 PF00849 RNA pseudouridylate synthase AMD13_RS12275 PF01479 S4 domain AMD13_RS12285 PF05096 Glutamine cyclotransferase AMD13_RS12290 PF00795 Carbon-nitrogen hydrolase AMD13_RS12295 PF00155 Aminotransferase class I and II AMD13_RS12300 PF00005 ABC transporter AMD13_RS12305 PF03379 AMD13_RS12305 AMD13_RS12310 PF01578 AMD13_RS12310 AMD13_RS12315 PF04995 AMD13_RS12315 AMD13_RS12320 PF03100 CcmE AMD13_RS12325 PF01578 AMD13_RS12325 AMD13_RS12325 PF16327 AMD13_RS12325 AMD13_RS12330 PF08534 Redoxin AMD13_RS12335 PF03918 Cytochrome C biogenesis protein AMD13_RS12340 PF13432 Tetratricopeptide repeat AMD13_RS12345 PF00561 alpha/beta hydrolase fold AMD13_RS12350 PF00313 'Cold-shock' DNA-binding domain AMD13_RS12350 PF06961 AMD13_RS12350 AMD13_RS12355 PF00005 ABC transporter AMD13_RS12355 PF00664 ABC transporter transmembrane region AMD13_RS12360 PF00005 ABC transporter AMD13_RS12360 PF00664 ABC transporter transmembrane region AMD13_RS12365 PF01654 AMD13_RS12365 AMD13_RS12370 PF02322 AMD13_RS12370 AMD13_RS12375 PF08173 AMD13_RS12375 AMD13_RS12385 PF07690 Major Facilitator Superfamily AMD13_RS12390 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD13_RS12390 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD13_RS12395 PF00171 Aldehyde dehydrogenase family AMD13_RS12400 PF00696 Amino acid kinase family AMD13_RS12400 PF01472 PUA domain AMD13_RS12405 PF03795 YCII-related domain AMD13_RS12410 PF00206 Lyase AMD13_RS12415 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD13_RS12420 PF13302 Acetyltransferase (GNAT) domain AMD13_RS12425 PF00696 Amino acid kinase family AMD13_RS12425 PF04768 Protein of unknown function (DUF619) AMD13_RS12430 PF01546 Peptidase family M20/M25/M40 AMD13_RS12430 PF07687 Peptidase dimerisation domain AMD13_RS12435 PF00583 Acetyltransferase (GNAT) family AMD13_RS12440 PF00764 Arginosuccinate synthase AMD13_RS12445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD13_RS12445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD13_RS12455 PF01406 tRNA synthetases class I (C) catalytic domain AMD13_RS12455 PF09190 DALR domain AMD13_RS12460 PF02657 Fe-S metabolism associated domain AMD13_RS12465 PF05977 Transmembrane secretion effector AMD13_RS12470 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD13_RS12480 PF01809 AMD13_RS12480 AMD13_RS12485 PF01979 Amidohydrolase family AMD13_RS12490 PF01551 Peptidase family M23 AMD13_RS12495 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS12500 PF13520 Amino acid permease AMD13_RS12505 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD13_RS12510 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD13_RS12520 PF00753 Metallo-beta-lactamase superfamily AMD13_RS12525 PF16242 AMD13_RS12525 AMD13_RS12540 PF01527 Transposase AMD13_RS12545 PF00295 Glycosyl hydrolases family 28 AMD13_RS12555 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS12560 PF13489 Methyltransferase domain AMD13_RS12565 PF01979 Amidohydrolase family AMD13_RS12575 PF01132 Elongation factor P (EF-P) OB domain AMD13_RS12575 PF08207 Elongation factor P (EF-P) KOW-like domain AMD13_RS12575 PF09285 Elongation factor P, C-terminal AMD13_RS12580 PF13353 4Fe-4S single cluster domain AMD13_RS12585 PF00563 EAL domain AMD13_RS12585 PF00672 HAMP domain AMD13_RS12585 PF00990 GGDEF domain AMD13_RS12585 PF17203 AMD13_RS12585 AMD13_RS12590 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein AMD13_RS12595 PF00588 SpoU rRNA Methylase family AMD13_RS12600 PF00459 Inositol monophosphatase family AMD13_RS12605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD13_RS12605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD13_RS12610 PF00545 ribonuclease AMD13_RS12615 PF01337 Barstar (barnase inhibitor) AMD13_RS12620 PF00005 ABC transporter AMD13_RS12620 PF12848 ABC transporter AMD13_RS12620 PF16326 AMD13_RS12620 AMD13_RS12625 PF00270 DEAD/DEAH box helicase AMD13_RS12625 PF00271 Helicase conserved C-terminal domain AMD13_RS12625 PF03880 DbpA RNA binding domain AMD13_RS12630 PF00156 Phosphoribosyl transferase domain AMD13_RS12635 PF02696 AMD13_RS12635 AMD13_RS12640 PF07859 alpha/beta hydrolase fold AMD13_RS12645 PF00043 Glutathione S-transferase, C-terminal domain AMD13_RS12645 PF02798 Glutathione S-transferase, N-terminal domain AMD13_RS12650 PF00313 'Cold-shock' DNA-binding domain AMD13_RS12655 PF07152 YaeQ protein AMD13_RS12660 PF03486 HI0933-like protein AMD13_RS12665 PF00563 EAL domain AMD13_RS12665 PF00990 GGDEF domain AMD13_RS12665 PF13188 PAS domain AMD13_RS12670 PF01435 Peptidase family M48 AMD13_RS12675 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD13_RS12680 PF00106 short chain dehydrogenase AMD13_RS12685 PF05233 AMD13_RS12685 AMD13_RS12685 PF07879 AMD13_RS12685 AMD13_RS12690 PF01963 AMD13_RS12690 AMD13_RS12695 PF07920 Protein of unknown function (DUF1684) AMD13_RS12700 PF01119 DNA mismatch repair protein, C-terminal domain AMD13_RS12700 PF08676 MutL C terminal dimerisation domain AMD13_RS12700 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS12705 PF01520 N-acetylmuramoyl-L-alanine amidase AMD13_RS12705 PF11741 AMIN domain AMD13_RS12710 PF02367 Uncharacterised P-loop hydrolase UPF0079 AMD13_RS12715 PF01256 Carbohydrate kinase AMD13_RS12715 PF03853 YjeF-related protein N-terminus AMD13_RS12720 PF08331 AMD13_RS12720 AMD13_RS12720 PF13484 AMD13_RS12720 AMD13_RS12725 PF02601 AMD13_RS12725 AMD13_RS12725 PF13742 AMD13_RS12725 AMD13_RS12730 PF06057 Bacterial virulence protein (VirJ) AMD13_RS12735 PF03781 Sulfatase-modifying factor enzyme 1 AMD13_RS12740 PF00570 HRDC domain AMD13_RS12740 PF01612 3'-5' exonuclease AMD13_RS12745 PF01068 ATP dependent DNA ligase domain AMD13_RS12745 PF04679 ATP dependent DNA ligase C terminal region AMD13_RS12745 PF13298 DNA polymerase Ligase (LigD) AMD13_RS12750 PF12244 AMD13_RS12750 AMD13_RS12755 PF00816 H-NS histone family AMD13_RS12765 PF00589 Phage integrase family AMD13_RS12790 PF01609 Transposase DDE domain AMD13_RS12790 PF05598 AMD13_RS12790 AMD13_RS12795 PF00665 Integrase core domain AMD13_RS12800 PF01527 Transposase AMD13_RS12815 PF05016 Plasmid stabilisation system protein AMD13_RS12820 PF01402 Ribbon-helix-helix protein, copG family AMD13_RS12825 PF01526 AMD13_RS12825 AMD13_RS12835 PF00665 Integrase core domain AMD13_RS12835 PF13276 AMD13_RS12835 AMD13_RS12840 PF00239 Resolvase, N terminal domain AMD13_RS12845 PF13166 AMD13_RS12845 AMD13_RS12855 PF02384 N-6 DNA Methylase AMD13_RS12860 PF09572 AMD13_RS12860 AMD13_RS12870 PF07929 Plasmid pRiA4b ORF-3-like protein AMD13_RS12885 PF04796 AMD13_RS12885 AMD13_RS12895 PF13289 AMD13_RS12895 AMD13_RS12900 PF01935 Domain of unknown function DUF87 AMD13_RS12910 PF00990 GGDEF domain AMD13_RS12915 PF01584 CheW-like domain AMD13_RS12920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS12920 PF00672 HAMP domain AMD13_RS12920 PF12729 AMD13_RS12920 AMD13_RS12925 PF02245 Methylpurine-DNA glycosylase (MPG) AMD13_RS12930 PF00270 DEAD/DEAH box helicase AMD13_RS12930 PF00271 Helicase conserved C-terminal domain AMD13_RS12930 PF08494 AMD13_RS12930 AMD13_RS12935 PF11743 AMD13_RS12935 AMD13_RS12945 PF04386 Stringent starvation protein B AMD13_RS12950 PF00043 Glutathione S-transferase, C-terminal domain AMD13_RS12950 PF13417 Glutathione S-transferase, N-terminal domain AMD13_RS12955 PF02167 Cytochrome C1 family AMD13_RS12960 PF00032 Cytochrome b(C-terminal)/b6/petD AMD13_RS12960 PF00033 Cytochrome b(N-terminal)/b6/petB AMD13_RS12965 PF00355 Rieske [2Fe-2S] domain AMD13_RS12965 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD13_RS12970 PF01464 Transglycosylase SLT domain AMD13_RS12975 PF08279 HTH domain AMD13_RS12975 PF13280 AMD13_RS12975 AMD13_RS12980 PF02798 Glutathione S-transferase, N-terminal domain AMD13_RS12985 PF00919 Uncharacterized protein family UPF0004 AMD13_RS12985 PF01938 TRAM domain AMD13_RS12985 PF04055 Radical SAM superfamily AMD13_RS12990 PF02562 PhoH-like protein AMD13_RS13000 PF02130 Uncharacterized protein family UPF0054 AMD13_RS13010 PF00571 CBS domain AMD13_RS13010 PF03471 Transporter associated domain AMD13_RS13015 PF13387 AMD13_RS13015 AMD13_RS13020 PF01544 CorA-like Mg2+ transporter protein AMD13_RS13025 PF00171 Aldehyde dehydrogenase family AMD13_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS13040 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS13045 PF00005 ABC transporter AMD13_RS13045 PF08402 TOBE domain AMD13_RS13050 PF02321 Outer membrane efflux protein AMD13_RS13055 PF07690 Major Facilitator Superfamily AMD13_RS13060 PF13533 Biotin-lipoyl like AMD13_RS13060 PF16576 AMD13_RS13060 AMD13_RS13065 PF13416 Bacterial extracellular solute-binding protein AMD13_RS13070 PF00202 Aminotransferase class-III AMD13_RS13075 PF00120 Glutamine synthetase, catalytic domain AMD13_RS13080 PF07722 Peptidase C26 AMD13_RS13085 PF00120 Glutamine synthetase, catalytic domain AMD13_RS13090 PF01266 FAD dependent oxidoreductase AMD13_RS13095 PF00072 Response regulator receiver domain AMD13_RS13095 PF00990 GGDEF domain AMD13_RS13100 PF01814 Hemerythrin HHE cation binding domain AMD13_RS13105 PF00083 Sugar (and other) transporter AMD13_RS13105 PF07690 Major Facilitator Superfamily AMD13_RS13115 PF00384 Molybdopterin oxidoreductase AMD13_RS13115 PF01568 Molydopterin dinucleotide binding domain AMD13_RS13120 PF02634 FdhD/NarQ family AMD13_RS13125 PF07690 Major Facilitator Superfamily AMD13_RS13130 PF00202 Aminotransferase class-III AMD13_RS13140 PF04286 AMD13_RS13140 AMD13_RS13145 PF00072 Response regulator receiver domain AMD13_RS13145 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS13145 PF01627 Hpt domain AMD13_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS13145 PF03924 CHASE domain AMD13_RS13145 PF13426 PAS domain AMD13_RS13150 PF00072 Response regulator receiver domain AMD13_RS13150 PF13487 HD domain AMD13_RS13155 PF07690 Major Facilitator Superfamily AMD13_RS13160 PF05088 AMD13_RS13160 AMD13_RS13160 PF12466 AMD13_RS13160 AMD13_RS13165 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS13170 PF16576 AMD13_RS13170 AMD13_RS13175 PF00873 AcrB/AcrD/AcrF family AMD13_RS13180 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS13180 PF13377 Periplasmic binding protein-like domain AMD13_RS13185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD13_RS13185 PF00381 PTS HPr component phosphorylation site AMD13_RS13185 PF00391 PEP-utilising enzyme, mobile domain AMD13_RS13185 PF02896 PEP-utilising enzyme, TIM barrel domain AMD13_RS13185 PF05524 PEP-utilising enzyme, N-terminal AMD13_RS13190 PF00294 pfkB family carbohydrate kinase AMD13_RS13195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD13_RS13200 PF04966 Carbohydrate-selective porin, OprB family AMD13_RS13215 PF07791 AMD13_RS13215 AMD13_RS13230 PF02355 Protein export membrane protein AMD13_RS13230 PF07549 SecD/SecF GG Motif AMD13_RS13235 PF02355 Protein export membrane protein AMD13_RS13235 PF07549 SecD/SecF GG Motif AMD13_RS13235 PF13721 SecD export protein N-terminal TM region AMD13_RS13240 PF02699 Preprotein translocase subunit AMD13_RS13245 PF01702 Queuine tRNA-ribosyltransferase AMD13_RS13250 PF02547 Queuosine biosynthesis protein AMD13_RS13255 PF01037 AsnC family AMD13_RS13255 PF13412 Winged helix-turn-helix DNA-binding AMD13_RS13265 PF00202 Aminotransferase class-III AMD13_RS13270 PF04488 Glycosyltransferase sugar-binding region containing DXD motif AMD13_RS13275 PF00149 Calcineurin-like phosphoesterase AMD13_RS13275 PF16656 AMD13_RS13275 AMD13_RS13280 PF02333 Phytase AMD13_RS13285 PF00593 TonB dependent receptor AMD13_RS13285 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS13290 PF14681 Uracil phosphoribosyltransferase AMD13_RS13295 PF00759 Glycosyl hydrolase family 9 AMD13_RS13295 PF02927 N-terminal ig-like domain of cellulase AMD13_RS13305 PF01019 Gamma-glutamyltranspeptidase AMD13_RS13310 PF00037 4Fe-4S binding domain AMD13_RS13325 PF01467 Cytidylyltransferase AMD13_RS13330 PF03602 Conserved hypothetical protein 95 AMD13_RS13335 PF00183 Hsp90 protein AMD13_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS13340 PF05593 AMD13_RS13340 AMD13_RS13340 PF14220 AMD13_RS13340 AMD13_RS13345 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) AMD13_RS13350 PF00593 TonB dependent receptor AMD13_RS13350 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS13355 PF00326 Prolyl oligopeptidase family AMD13_RS13355 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD13_RS13360 PF04616 Glycosyl hydrolases family 43 AMD13_RS13365 PF00754 F5/8 type C domain AMD13_RS13365 PF07532 AMD13_RS13365 AMD13_RS13370 PF00593 TonB dependent receptor AMD13_RS13370 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS13380 PF00082 Subtilase family AMD13_RS13380 PF09286 Pro-kumamolisin, activation domain AMD13_RS13395 PF01301 Glycosyl hydrolases family 35 AMD13_RS13400 PF00326 Prolyl oligopeptidase family AMD13_RS13400 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD13_RS13405 PF13520 Amino acid permease AMD13_RS13410 PF05960 Bacterial protein of unknown function (DUF885) AMD13_RS13415 PF05960 Bacterial protein of unknown function (DUF885) AMD13_RS13420 PF00557 Metallopeptidase family M24 AMD13_RS13420 PF01321 Creatinase/Prolidase N-terminal domain AMD13_RS13425 PF00171 Aldehyde dehydrogenase family AMD13_RS13430 PF00701 Dihydrodipicolinate synthetase family AMD13_RS13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS13440 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD13_RS13445 PF01266 FAD dependent oxidoreductase AMD13_RS13450 PF05544 Proline racemase AMD13_RS13455 PF08448 PAS fold AMD13_RS13455 PF12833 Helix-turn-helix domain AMD13_RS13460 PF00448 SRP54-type protein, GTPase domain AMD13_RS13460 PF02881 SRP54-type protein, helical bundle domain AMD13_RS13465 PF00633 Helix-hairpin-helix motif AMD13_RS13465 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD13_RS13465 PF14815 NUDIX domain AMD13_RS13470 PF04362 Bacterial Fe(2+) trafficking AMD13_RS13475 PF00072 Response regulator receiver domain AMD13_RS13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS13475 PF13426 PAS domain AMD13_RS13485 PF10685 AMD13_RS13485 AMD13_RS13505 PF08212 Lipocalin-like domain AMD13_RS13510 PF03168 Late embryogenesis abundant protein AMD13_RS13515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS13515 PF02770 Acyl-CoA dehydrogenase, middle domain AMD13_RS13515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD13_RS13515 PF12418 AMD13_RS13515 AMD13_RS13515 PF12806 AMD13_RS13515 AMD13_RS13520 PF14279 AMD13_RS13520 AMD13_RS13525 PF02779 Transketolase, pyrimidine binding domain AMD13_RS13525 PF02780 Transketolase, C-terminal domain AMD13_RS13525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD13_RS13530 PF04101 Glycosyltransferase family 28 C-terminal domain AMD13_RS13540 PF13506 Glycosyl transferase family 21 AMD13_RS13545 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS13550 PF00753 Metallo-beta-lactamase superfamily AMD13_RS13555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD13_RS13555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD13_RS13560 PF01963 AMD13_RS13560 AMD13_RS13565 PF06172 Cupin superfamily (DUF985) AMD13_RS13570 PF03808 AMD13_RS13570 AMD13_RS13575 PF04230 AMD13_RS13575 AMD13_RS13585 PF13440 AMD13_RS13585 AMD13_RS13590 PF13692 Glycosyl transferases group 1 AMD13_RS13595 PF00534 Glycosyl transferases group 1 AMD13_RS13595 PF13439 Glycosyltransferase Family 4 AMD13_RS13600 PF01757 AMD13_RS13600 AMD13_RS13605 PF01757 AMD13_RS13605 AMD13_RS13615 PF02397 AMD13_RS13615 AMD13_RS13615 PF13727 CoA-binding domain AMD13_RS13620 PF02706 Chain length determinant protein AMD13_RS13620 PF13807 AMD13_RS13620 AMD13_RS13625 PF02563 Polysaccharide biosynthesis/export protein AMD13_RS13625 PF10531 SLBB domain AMD13_RS13635 PF13411 MerR HTH family regulatory protein AMD13_RS13640 PF00216 Bacterial DNA-binding protein AMD13_RS13645 PF01588 Putative tRNA binding domain AMD13_RS13645 PF03147 Ferredoxin-fold anticodon binding domain AMD13_RS13645 PF03483 B3/4 domain AMD13_RS13645 PF03484 tRNA synthetase B5 domain AMD13_RS13650 PF01409 tRNA synthetases class II core domain (F) AMD13_RS13650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD13_RS13655 PF00453 Ribosomal protein L20 AMD13_RS13660 PF01632 Ribosomal protein L35 AMD13_RS13665 PF00707 Translation initiation factor IF-3, C-terminal domain AMD13_RS13665 PF05198 Translation initiation factor IF-3, N-terminal domain AMD13_RS13670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD13_RS13670 PF02824 TGS domain AMD13_RS13670 PF03129 Anticodon binding domain AMD13_RS13670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD13_RS13675 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS13675 PF13377 Periplasmic binding protein-like domain AMD13_RS13680 PF00128 Alpha amylase, catalytic domain AMD13_RS13685 PF07690 Major Facilitator Superfamily AMD13_RS13690 PF06202 Amylo-alpha-1,6-glucosidase AMD13_RS13695 PF10566 Glycoside hydrolase 97 AMD13_RS13695 PF14508 Glycosyl-hydrolase 97 N-terminal AMD13_RS13695 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD13_RS13705 PF00593 TonB dependent receptor AMD13_RS13705 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS13710 PF00128 Alpha amylase, catalytic domain AMD13_RS13715 PF01527 Transposase AMD13_RS13720 PF13683 AMD13_RS13720 AMD13_RS13735 PF01471 Putative peptidoglycan binding domain AMD13_RS13745 PF04610 AMD13_RS13745 AMD13_RS13755 PF03135 AMD13_RS13755 AMD13_RS13760 PF05101 AMD13_RS13760 AMD13_RS13765 PF04956 AMD13_RS13765 AMD13_RS13770 PF01464 Transglycosylase SLT domain AMD13_RS13775 PF00437 Type II/IV secretion system protein AMD13_RS13780 PF03743 Bacterial conjugation TrbI-like protein AMD13_RS13785 PF03524 Conjugal transfer protein AMD13_RS13790 PF04335 VirB8 protein AMD13_RS13795 PF10671 Toxin co-regulated pilus biosynthesis protein Q AMD13_RS13800 PF02534 Type IV secretory system Conjugative DNA transfer AMD13_RS13815 PF00271 Helicase conserved C-terminal domain AMD13_RS13815 PF02151 UvrB/uvrC motif AMD13_RS13815 PF04851 Type III restriction enzyme, res subunit AMD13_RS13815 PF12344 Ultra-violet resistance protein B AMD13_RS13850 PF01527 Transposase AMD13_RS13860 PF13333 AMD13_RS13860 AMD13_RS13880 PF01555 DNA methylase AMD13_RS13885 PF04860 Phage portal protein AMD13_RS13890 PF03237 Terminase-like family AMD13_RS13890 PF06056 Putative ATPase subunit of terminase (gpP-like) AMD13_RS13895 PF05929 AMD13_RS13895 AMD13_RS13900 PF05125 AMD13_RS13900 AMD13_RS13905 PF05944 AMD13_RS13905 AMD13_RS13910 PF05926 AMD13_RS13910 AMD13_RS13915 PF05489 Phage Tail Protein X AMD13_RS13920 PF16931 AMD13_RS13920 AMD13_RS13925 PF05449 AMD13_RS13925 AMD13_RS13940 PF06891 AMD13_RS13940 AMD13_RS13945 PF05069 AMD13_RS13945 AMD13_RS13950 PF04865 AMD13_RS13950 AMD13_RS13955 PF09684 AMD13_RS13955 AMD13_RS13975 PF04717 Phage-related baseplate assembly protein AMD13_RS13985 PF01527 Transposase AMD13_RS13995 PF13633 Prokaryotic N-terminal methylation site AMD13_RS13995 PF16732 AMD13_RS13995 AMD13_RS14000 PF05567 Neisseria PilC beta-propeller domain AMD13_RS14005 PF13681 AMD13_RS14005 AMD13_RS14005 PF14341 AMD13_RS14005 AMD13_RS14010 PF13544 AMD13_RS14010 AMD13_RS14010 PF16074 AMD13_RS14010 AMD13_RS14015 PF13544 AMD13_RS14015 AMD13_RS14020 PF12019 Type II transport protein GspH AMD13_RS14020 PF13633 Prokaryotic N-terminal methylation site AMD13_RS14025 PF06580 AMD13_RS14025 AMD13_RS14030 PF03641 Possible lysine decarboxylase AMD13_RS14030 PF11892 Domain of unknown function (DUF3412) AMD13_RS14030 PF14793 Domain of unknown function (DUF4478) AMD13_RS14035 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS14035 PF13620 Carboxypeptidase regulatory-like domain AMD13_RS14040 PF01914 AMD13_RS14040 AMD13_RS14045 PF00106 short chain dehydrogenase AMD13_RS14050 PF00462 Glutaredoxin AMD13_RS14055 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD13_RS14055 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD13_RS14060 PF02222 ATP-grasp domain AMD13_RS14065 PF00731 AIR carboxylase AMD13_RS14070 PF03966 Trm112p-like protein AMD13_RS14075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD13_RS14075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD13_RS14080 PF10030 AMD13_RS14080 AMD13_RS14085 PF00013 KH domain AMD13_RS14085 PF00575 S1 RNA binding domain AMD13_RS14085 PF01138 3' exoribonuclease family, domain 1 AMD13_RS14085 PF03725 3' exoribonuclease family, domain 2 AMD13_RS14085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD13_RS14090 PF00312 Ribosomal protein S15 AMD13_RS14095 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD13_RS14095 PF09157 Pseudouridine synthase II TruB, C-terminal AMD13_RS14095 PF16198 AMD13_RS14095 AMD13_RS14100 PF02033 Ribosome-binding factor A AMD13_RS14105 PF00009 Elongation factor Tu GTP binding domain AMD13_RS14105 PF04760 Translation initiation factor IF-2, N-terminal region AMD13_RS14105 PF08364 AMD13_RS14105 AMD13_RS14105 PF11987 Translation-initiation factor 2 AMD13_RS14110 PF00575 S1 RNA binding domain AMD13_RS14110 PF08529 NusA N-terminal domain AMD13_RS14110 PF13184 NusA-like KH domain AMD13_RS14110 PF14520 Helix-hairpin-helix domain AMD13_RS14115 PF02576 Uncharacterised BCR, YhbC family COG0779 AMD13_RS14125 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD13_RS14130 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD13_RS14135 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AMD13_RS14135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD13_RS14140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD13_RS14145 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD13_RS14150 PF12838 4Fe-4S dicluster domain AMD13_RS14155 PF00146 NADH dehydrogenase AMD13_RS14160 PF00384 Molybdopterin oxidoreductase AMD13_RS14160 PF01568 Molydopterin dinucleotide binding domain AMD13_RS14160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD13_RS14160 PF13510 2Fe-2S iron-sulfur cluster binding domain AMD13_RS14165 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD13_RS14165 PF10531 SLBB domain AMD13_RS14165 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD13_RS14170 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AMD13_RS14175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD13_RS14180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD13_RS14185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD13_RS14190 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD13_RS14200 PF03840 Preprotein translocase SecG subunit AMD13_RS14205 PF00121 Triosephosphate isomerase AMD13_RS14210 PF00106 short chain dehydrogenase AMD13_RS14215 PF01152 Bacterial-like globin AMD13_RS14220 PF11231 AMD13_RS14220 AMD13_RS14225 PF00563 EAL domain AMD13_RS14225 PF00672 HAMP domain AMD13_RS14225 PF00990 GGDEF domain AMD13_RS14225 PF14827 Sensory domain of two-component sensor kinase AMD13_RS14235 PF03171 2OG-Fe(II) oxygenase superfamily AMD13_RS14235 PF14226 non-haem dioxygenase in morphine synthesis N-terminal AMD13_RS14245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD13_RS14245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD13_RS14245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD13_RS14245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD13_RS14250 PF01039 Carboxyl transferase domain AMD13_RS14255 PF00290 Tryptophan synthase alpha chain AMD13_RS14265 PF00291 Pyridoxal-phosphate dependent enzyme AMD13_RS14270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS14270 PF03466 LysR substrate binding domain AMD13_RS14275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD13_RS14280 PF01416 tRNA pseudouridine synthase AMD13_RS14285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS14300 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD13_RS14300 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD13_RS14305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD13_RS14305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD13_RS14310 PF01264 Chorismate synthase AMD13_RS14315 PF05175 Methyltransferase small domain AMD13_RS14320 PF02630 SCO1/SenC AMD13_RS14325 PF02666 AMD13_RS14325 AMD13_RS14330 PF01464 Transglycosylase SLT domain AMD13_RS14330 PF01476 LysM domain AMD13_RS14335 PF05872 AMD13_RS14335 AMD13_RS14340 PF00293 NUDIX domain AMD13_RS14350 PF01694 Rhomboid family AMD13_RS14355 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD13_RS14355 PF03449 Transcription elongation factor, N-terminal AMD13_RS14360 PF00919 Uncharacterized protein family UPF0004 AMD13_RS14360 PF04055 Radical SAM superfamily AMD13_RS14365 PF01738 Dienelactone hydrolase family AMD13_RS14370 PF01230 HIT domain AMD13_RS14385 PF00692 dUTPase AMD13_RS14390 PF10609 ParA/MinD ATPase like AMD13_RS14395 PF00593 TonB dependent receptor AMD13_RS14395 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS14400 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS14405 PF01593 Flavin containing amine oxidoreductase AMD13_RS14410 PF01431 Peptidase family M13 AMD13_RS14410 PF05649 Peptidase family M13 AMD13_RS14415 PF01431 Peptidase family M13 AMD13_RS14415 PF05649 Peptidase family M13 AMD13_RS14420 PF01431 Peptidase family M13 AMD13_RS14420 PF05649 Peptidase family M13 AMD13_RS14425 PF01694 Rhomboid family AMD13_RS14430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD13_RS14435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD13_RS14435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS14440 PF01266 FAD dependent oxidoreductase AMD13_RS14445 PF04235 AMD13_RS14445 AMD13_RS14450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD13_RS14455 PF00877 NlpC/P60 family AMD13_RS14460 PF00877 NlpC/P60 family AMD13_RS14465 PF03061 Thioesterase superfamily AMD13_RS14470 PF13847 Methyltransferase domain AMD13_RS14475 PF00375 Sodium:dicarboxylate symporter family AMD13_RS14480 PF00245 Alkaline phosphatase AMD13_RS14485 PF01171 PP-loop family AMD13_RS14485 PF09179 TilS substrate binding domain AMD13_RS14485 PF11734 TilS substrate C-terminal domain AMD13_RS14490 PF02609 Exonuclease VII small subunit AMD13_RS14495 PF00348 Polyprenyl synthetase AMD13_RS14500 PF14521 Lysine-specific metallo-endopeptidase AMD13_RS14505 PF09685 AMD13_RS14505 AMD13_RS14510 PF01523 Putative modulator of DNA gyrase AMD13_RS14515 PF04751 Protein of unknown function (DUF615) AMD13_RS14520 PF01523 Putative modulator of DNA gyrase AMD13_RS14530 PF13116 AMD13_RS14530 AMD13_RS14530 PF13502 AMD13_RS14530 AMD13_RS14535 PF10150 Ribonuclease E/G family AMD13_RS14540 PF02545 Maf-like protein AMD13_RS14545 PF04402 Protein of unknown function (DUF541) AMD13_RS14550 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS14550 PF13620 Carboxypeptidase regulatory-like domain AMD13_RS14555 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS14560 PF02590 Predicted SPOUT methyltransferase AMD13_RS14565 PF05787 Bacterial protein of unknown function (DUF839) AMD13_RS14565 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD13_RS14570 PF02410 Oligomerisation domain AMD13_RS14575 PF01467 Cytidylyltransferase AMD13_RS14580 PF06144 DNA polymerase III, delta subunit AMD13_RS14585 PF04390 Lipopolysaccharide-assembly AMD13_RS14590 PF00133 tRNA synthetases class I (I, L, M and V) AMD13_RS14590 PF08264 Anticodon-binding domain of tRNA AMD13_RS14590 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD13_RS14595 PF06197 AMD13_RS14595 AMD13_RS14600 PF00085 Thioredoxin AMD13_RS14600 PF14559 Tetratricopeptide repeat AMD13_RS14600 PF14561 Tetratricopeptide repeat AMD13_RS14610 PF14539 Domain of unknown function (DUF4442) AMD13_RS14625 PF04070 AMD13_RS14625 AMD13_RS14630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD13_RS14635 PF00892 EamA-like transporter family AMD13_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS14640 PF03466 LysR substrate binding domain AMD13_RS14655 PF14257 AMD13_RS14655 AMD13_RS14665 PF05960 Bacterial protein of unknown function (DUF885) AMD13_RS14670 PF00005 ABC transporter AMD13_RS14670 PF00664 ABC transporter transmembrane region AMD13_RS14675 PF07929 Plasmid pRiA4b ORF-3-like protein AMD13_RS14680 PF00873 AcrB/AcrD/AcrF family AMD13_RS14685 PF16576 AMD13_RS14685 AMD13_RS14690 PF06629 AMD13_RS14690 AMD13_RS14695 PF02321 Outer membrane efflux protein AMD13_RS14700 PF00072 Response regulator receiver domain AMD13_RS14700 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS14705 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS14705 PF00672 HAMP domain AMD13_RS14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS14710 PF00999 Sodium/hydrogen exchanger family AMD13_RS14715 PF00144 Beta-lactamase AMD13_RS14715 PF11954 AMD13_RS14715 AMD13_RS14720 PF03737 Demethylmenaquinone methyltransferase AMD13_RS14730 PF01904 Protein of unknown function DUF72 AMD13_RS14735 PF00892 EamA-like transporter family AMD13_RS14740 PF00990 GGDEF domain AMD13_RS14740 PF01590 GAF domain AMD13_RS14745 PF00849 RNA pseudouridylate synthase AMD13_RS14745 PF01479 S4 domain AMD13_RS14750 PF00563 EAL domain AMD13_RS14750 PF00990 GGDEF domain AMD13_RS14750 PF08447 PAS fold AMD13_RS14755 PF00270 DEAD/DEAH box helicase AMD13_RS14755 PF00271 Helicase conserved C-terminal domain AMD13_RS14755 PF03880 DbpA RNA binding domain AMD13_RS14760 PF04542 Sigma-70 region 2 AMD13_RS14760 PF08281 Sigma-70, region 4 AMD13_RS14770 PF13275 S4 domain AMD13_RS14780 PF01124 MAPEG family AMD13_RS14785 PF13211 AMD13_RS14785 AMD13_RS14800 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD13_RS14800 PF02805 Metal binding domain of Ada AMD13_RS14800 PF06029 AlkA N-terminal domain AMD13_RS14800 PF12833 Helix-turn-helix domain AMD13_RS14805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD13_RS14805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD13_RS14810 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AMD13_RS14815 PF00654 Voltage gated chloride channel AMD13_RS14820 PF00107 Zinc-binding dehydrogenase AMD13_RS14820 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS14825 PF17067 AMD13_RS14825 AMD13_RS14830 PF03203 AMD13_RS14830 AMD13_RS14835 PF00593 TonB dependent receptor AMD13_RS14835 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS14840 PF00593 TonB dependent receptor AMD13_RS14840 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS14845 PF00082 Subtilase family AMD13_RS14845 PF01483 Proprotein convertase P-domain AMD13_RS14855 PF00082 Subtilase family AMD13_RS14855 PF01483 Proprotein convertase P-domain AMD13_RS14865 PF00248 Aldo/keto reductase family AMD13_RS14870 PF07690 Major Facilitator Superfamily AMD13_RS14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS14875 PF03466 LysR substrate binding domain AMD13_RS14885 PF06719 AMD13_RS14885 AMD13_RS14885 PF12833 Helix-turn-helix domain AMD13_RS14890 PF07883 Cupin domain AMD13_RS14895 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS14900 PF02321 Outer membrane efflux protein AMD13_RS14905 PF00873 AcrB/AcrD/AcrF family AMD13_RS14910 PF00529 HlyD family secretion protein AMD13_RS14910 PF16576 AMD13_RS14910 AMD13_RS14915 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS14915 PF14246 AefR-like transcriptional repressor, C-terminal region AMD13_RS14920 PF01475 Ferric uptake regulator family AMD13_RS14925 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD13_RS14930 PF12275 AMD13_RS14930 AMD13_RS14935 PF00795 Carbon-nitrogen hydrolase AMD13_RS14950 PF06123 AMD13_RS14950 AMD13_RS14955 PF00112 Papain family cysteine protease AMD13_RS14960 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS14960 PF00672 HAMP domain AMD13_RS14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS14965 PF00072 Response regulator receiver domain AMD13_RS14965 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS14970 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AMD13_RS14975 PF00583 Acetyltransferase (GNAT) family AMD13_RS14980 PF00270 DEAD/DEAH box helicase AMD13_RS14980 PF00271 Helicase conserved C-terminal domain AMD13_RS14980 PF02559 CarD-like/TRCF domain AMD13_RS14980 PF03461 TRCF domain AMD13_RS14995 PF14412 AMD13_RS14995 AMD13_RS15000 PF07791 AMD13_RS15000 AMD13_RS15005 PF08845 AMD13_RS15005 AMD13_RS15010 PF13466 STAS domain AMD13_RS15015 PF01584 CheW-like domain AMD13_RS15015 PF01627 Hpt domain AMD13_RS15015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS15015 PF02895 Signal transducing histidine kinase, homodimeric domain AMD13_RS15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS15025 PF01584 CheW-like domain AMD13_RS15030 PF00072 Response regulator receiver domain AMD13_RS15030 PF00563 EAL domain AMD13_RS15035 PF01739 CheR methyltransferase, SAM binding domain AMD13_RS15035 PF03705 CheR methyltransferase, all-alpha domain AMD13_RS15040 PF00072 Response regulator receiver domain AMD13_RS15040 PF01339 CheB methylesterase AMD13_RS15045 PF13091 PLD-like domain AMD13_RS15050 PF01431 Peptidase family M13 AMD13_RS15050 PF05649 Peptidase family M13 AMD13_RS15060 PF00300 Histidine phosphatase superfamily (branch 1) AMD13_RS15065 PF04493 Endonuclease V AMD13_RS15075 PF02678 Pirin AMD13_RS15075 PF05726 Pirin C-terminal cupin domain AMD13_RS15085 PF02566 OsmC-like protein AMD13_RS15090 PF02678 Pirin AMD13_RS15090 PF05726 Pirin C-terminal cupin domain AMD13_RS15095 PF02554 AMD13_RS15095 AMD13_RS15095 PF13722 AMD13_RS15095 AMD13_RS15100 PF04328 AMD13_RS15100 AMD13_RS15105 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS15110 PF12796 Ankyrin repeats (3 copies) AMD13_RS15115 PF11187 Protein of unknown function (DUF2974) AMD13_RS15120 PF05684 AMD13_RS15120 AMD13_RS15135 PF12804 MobA-like NTP transferase domain AMD13_RS15140 PF00665 Integrase core domain AMD13_RS15145 PF01527 Transposase AMD13_RS15155 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD13_RS15155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD13_RS15160 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD13_RS15160 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD13_RS15165 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD13_RS15165 PF01799 [2Fe-2S] binding domain AMD13_RS15170 PF00107 Zinc-binding dehydrogenase AMD13_RS15170 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS15175 PF00990 GGDEF domain AMD13_RS15175 PF02743 Cache domain AMD13_RS15180 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMD13_RS15180 PF04851 Type III restriction enzyme, res subunit AMD13_RS15190 PF02384 N-6 DNA Methylase AMD13_RS15190 PF12161 HsdM N-terminal domain AMD13_RS15205 PF00589 Phage integrase family AMD13_RS15210 PF00589 Phage integrase family AMD13_RS15215 PF00436 Single-strand binding protein family AMD13_RS15220 PF00348 Polyprenyl synthetase AMD13_RS15225 PF01738 Dienelactone hydrolase family AMD13_RS15230 PF02875 Mur ligase family, glutamate ligase domain AMD13_RS15230 PF08245 Mur ligase middle domain AMD13_RS15245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD13_RS15245 PF00696 Amino acid kinase family AMD13_RS15245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD13_RS15250 PF02567 Phenazine biosynthesis-like protein AMD13_RS15255 PF02567 Phenazine biosynthesis-like protein AMD13_RS15260 PF05433 AMD13_RS15260 AMD13_RS15265 PF02566 OsmC-like protein AMD13_RS15270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD13_RS15270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD13_RS15275 PF03652 Uncharacterised protein family (UPF0081) AMD13_RS15280 PF02622 Uncharacterized ACR, COG1678 AMD13_RS15290 PF03352 Methyladenine glycosylase AMD13_RS15295 PF01904 Protein of unknown function DUF72 AMD13_RS15300 PF03211 Pectate lyase AMD13_RS15305 PF00437 Type II/IV secretion system protein AMD13_RS15310 PF00437 Type II/IV secretion system protein AMD13_RS15315 PF01168 Alanine racemase, N-terminal domain AMD13_RS15320 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD13_RS15320 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD13_RS15325 PF00216 Bacterial DNA-binding protein AMD13_RS15330 PF01551 Peptidase family M23 AMD13_RS15335 PF12977 Domain of Unknown Function with PDB structure (DUF3861) AMD13_RS15345 PF07273 Protein of unknown function (DUF1439) AMD13_RS15350 PF01965 DJ-1/PfpI family AMD13_RS15355 PF00856 SET domain AMD13_RS15360 PF02082 Transcriptional regulator AMD13_RS15365 PF01458 Uncharacterized protein family (UPF0051) AMD13_RS15370 PF00005 ABC transporter AMD13_RS15375 PF01458 Uncharacterized protein family (UPF0051) AMD13_RS15380 PF00266 Aminotransferase class-V AMD13_RS15385 PF13673 Acetyltransferase (GNAT) domain AMD13_RS15390 PF00355 Rieske [2Fe-2S] domain AMD13_RS15395 PF00593 TonB dependent receptor AMD13_RS15395 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS15400 PF13640 2OG-Fe(II) oxygenase superfamily AMD13_RS15405 PF08238 Sel1 repeat AMD13_RS15410 PF16357 AMD13_RS15410 AMD13_RS15415 PF10029 AMD13_RS15415 AMD13_RS15420 PF10670 AMD13_RS15420 AMD13_RS15425 PF02424 ApbE family AMD13_RS15430 PF00175 Oxidoreductase NAD-binding domain AMD13_RS15430 PF00258 Flavodoxin AMD13_RS15435 PF13202 EF hand AMD13_RS15435 PF13499 EF-hand domain pair AMD13_RS15440 PF05962 HutD AMD13_RS15445 PF12836 Helix-hairpin-helix motif AMD13_RS15450 PF01546 Peptidase family M20/M25/M40 AMD13_RS15450 PF07687 Peptidase dimerisation domain AMD13_RS15455 PF04226 AMD13_RS15455 AMD13_RS15460 PF01636 Phosphotransferase enzyme family AMD13_RS15465 PF00483 Nucleotidyl transferase AMD13_RS15470 PF00308 Bacterial dnaA protein AMD13_RS15475 PF01594 AMD13_RS15475 AMD13_RS15480 PF09839 AMD13_RS15480 AMD13_RS15485 PF00586 AIR synthase related protein, N-terminal domain AMD13_RS15485 PF02769 AIR synthase related protein, C-terminal domain AMD13_RS15495 PF00551 Formyl transferase AMD13_RS15500 PF11306 Protein of unknown function (DUF3108) AMD13_RS15505 PF11306 Protein of unknown function (DUF3108) AMD13_RS15515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD13_RS15520 PF01722 BolA-like protein AMD13_RS15525 PF00571 CBS domain AMD13_RS15525 PF01380 SIS domain AMD13_RS15530 PF08282 haloacid dehalogenase-like hydrolase AMD13_RS15535 PF06835 Lipopolysaccharide-assembly, LptC-related AMD13_RS15540 PF03968 OstA-like protein AMD13_RS15545 PF00005 ABC transporter AMD13_RS15545 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD13_RS15550 PF00309 AMD13_RS15550 AMD13_RS15550 PF04552 Sigma-54, DNA binding domain AMD13_RS15550 PF04963 Sigma-54 factor, core binding domain AMD13_RS15555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD13_RS15560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD13_RS15565 PF02603 HPr Serine kinase N terminus AMD13_RS15565 PF07475 HPr Serine kinase C-terminal domain AMD13_RS15570 PF03668 AMD13_RS15570 AMD13_RS15575 PF03610 PTS system fructose IIA component AMD13_RS15580 PF00381 PTS HPr component phosphorylation site AMD13_RS15585 PF00391 PEP-utilising enzyme, mobile domain AMD13_RS15585 PF02896 PEP-utilising enzyme, TIM barrel domain AMD13_RS15585 PF05524 PEP-utilising enzyme, N-terminal AMD13_RS15590 PF00571 CBS domain AMD13_RS15590 PF01769 Divalent cation transporter AMD13_RS15590 PF03448 MgtE intracellular N domain AMD13_RS15595 PF00326 Prolyl oligopeptidase family AMD13_RS15600 PF02322 AMD13_RS15600 AMD13_RS15605 PF01654 AMD13_RS15605 AMD13_RS15610 PF01244 Membrane dipeptidase (Peptidase family M19) AMD13_RS15615 PF00324 Amino acid permease AMD13_RS15620 PF00544 Pectate lyase AMD13_RS15625 PF00561 alpha/beta hydrolase fold AMD13_RS15635 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS15635 PF03472 Autoinducer binding domain AMD13_RS15640 PF13520 Amino acid permease AMD13_RS15645 PF01764 Lipase (class 3) AMD13_RS15650 PF13365 Trypsin-like peptidase domain AMD13_RS15660 PF12706 Beta-lactamase superfamily domain AMD13_RS15665 PF04820 Tryptophan halogenase AMD13_RS15670 PF13621 Cupin-like domain AMD13_RS15675 PF07277 AMD13_RS15675 AMD13_RS15680 PF00593 TonB dependent receptor AMD13_RS15680 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS15690 PF00376 MerR family regulatory protein AMD13_RS15690 PF09278 MerR, DNA binding AMD13_RS15695 PF07690 Major Facilitator Superfamily AMD13_RS15705 PF03738 Glutathionylspermidine synthase preATP-grasp AMD13_RS15710 PF06693 AMD13_RS15710 AMD13_RS15715 PF03994 AMD13_RS15715 AMD13_RS15720 PF10679 AMD13_RS15720 AMD13_RS15725 PF07885 Ion channel AMD13_RS15730 PF04012 AMD13_RS15730 AMD13_RS15735 PF09938 AMD13_RS15735 AMD13_RS15740 PF01243 Pyridoxamine 5'-phosphate oxidase AMD13_RS15740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD13_RS15745 PF01202 Shikimate kinase AMD13_RS15750 PF01761 3-dehydroquinate synthase AMD13_RS15760 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD13_RS15765 PF11747 AMD13_RS15765 AMD13_RS15770 PF11747 AMD13_RS15770 AMD13_RS15775 PF11747 AMD13_RS15775 AMD13_RS15780 PF11747 AMD13_RS15780 AMD13_RS15790 PF11747 AMD13_RS15790 AMD13_RS15795 PF11747 AMD13_RS15795 AMD13_RS15815 PF08924 Domain of unknown function (DUF1906) AMD13_RS15830 PF12833 Helix-turn-helix domain AMD13_RS15830 PF14532 Sigma-54 interaction domain AMD13_RS15835 PF07690 Major Facilitator Superfamily AMD13_RS15840 PF00072 Response regulator receiver domain AMD13_RS15840 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS15840 PF07494 Two component regulator propeller AMD13_RS15840 PF07495 Y_Y_Y domain AMD13_RS15845 PF00072 Response regulator receiver domain AMD13_RS15845 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS15845 PF07494 Two component regulator propeller AMD13_RS15845 PF07495 Y_Y_Y domain AMD13_RS15855 PF00072 Response regulator receiver domain AMD13_RS15855 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS15855 PF07494 Two component regulator propeller AMD13_RS15855 PF07495 Y_Y_Y domain AMD13_RS15860 PF04264 YceI-like domain AMD13_RS15865 PF01292 Prokaryotic cytochrome b561 AMD13_RS15870 PF04264 YceI-like domain AMD13_RS15875 PF05768 Glutaredoxin-like domain (DUF836) AMD13_RS15880 PF03313 AMD13_RS15880 AMD13_RS15880 PF03315 Serine dehydratase beta chain AMD13_RS15885 PF00561 alpha/beta hydrolase fold AMD13_RS15890 PF00742 Homoserine dehydrogenase AMD13_RS15890 PF03447 Homoserine dehydrogenase, NAD binding domain AMD13_RS15895 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD13_RS15900 PF00561 alpha/beta hydrolase fold AMD13_RS15905 PF01551 Peptidase family M23 AMD13_RS15910 PF00009 Elongation factor Tu GTP binding domain AMD13_RS15910 PF16658 AMD13_RS15910 AMD13_RS15915 PF03006 AMD13_RS15915 AMD13_RS15920 PF05170 AMD13_RS15920 AMD13_RS15925 PF00571 CBS domain AMD13_RS15930 PF00535 Glycosyl transferase family 2 AMD13_RS15935 PF00912 Transglycosylase AMD13_RS15940 PF01430 Hsp33 protein AMD13_RS15950 PF00593 TonB dependent receptor AMD13_RS15950 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS15955 PF13181 Tetratricopeptide repeat AMD13_RS15955 PF13469 Sulfotransferase family AMD13_RS15960 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS15965 PF12146 Putative lysophospholipase AMD13_RS15970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD13_RS15970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD13_RS15970 PF09317 AMD13_RS15970 AMD13_RS15975 PF06993 AMD13_RS15975 AMD13_RS15980 PF07690 Major Facilitator Superfamily AMD13_RS15985 PF00144 Beta-lactamase AMD13_RS15995 PF01597 Glycine cleavage H-protein AMD13_RS16000 PF01571 Aminomethyltransferase folate-binding domain AMD13_RS16000 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD13_RS16005 PF01957 NfeD-like C-terminal, partner-binding AMD13_RS16010 PF16200 AMD13_RS16010 AMD13_RS16015 PF02694 AMD13_RS16015 AMD13_RS16020 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD13_RS16025 PF00459 Inositol monophosphatase family AMD13_RS16030 PF00293 NUDIX domain AMD13_RS16035 PF00202 Aminotransferase class-III AMD13_RS16040 PF04452 RNA methyltransferase AMD13_RS16045 PF02685 Glucokinase AMD13_RS16050 PF00593 TonB dependent receptor AMD13_RS16050 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16055 PF01120 Alpha-L-fucosidase AMD13_RS16055 PF16757 AMD13_RS16055 AMD13_RS16060 PF00704 Glycosyl hydrolases family 18 AMD13_RS16065 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD13_RS16065 PF02838 Glycosyl hydrolase family 20, domain 2 AMD13_RS16065 PF13290 AMD13_RS16065 AMD13_RS16070 PF00703 Glycosyl hydrolases family 2 AMD13_RS16075 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD13_RS16075 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD13_RS16075 PF07691 PA14 domain AMD13_RS16075 PF14310 Fibronectin type III-like domain AMD13_RS16080 PF00593 TonB dependent receptor AMD13_RS16080 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16080 PF13620 Carboxypeptidase regulatory-like domain AMD13_RS16085 PF01301 Glycosyl hydrolases family 35 AMD13_RS16090 PF13520 Amino acid permease AMD13_RS16095 PF00294 pfkB family carbohydrate kinase AMD13_RS16100 PF02056 Family 4 glycosyl hydrolase AMD13_RS16100 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD13_RS16105 PF06824 Protein of unknown function (DUF1237) AMD13_RS16110 PF07971 Glycosyl hydrolase family 92 AMD13_RS16115 PF01301 Glycosyl hydrolases family 35 AMD13_RS16130 PF11747 AMD13_RS16130 AMD13_RS16135 PF13088 BNR repeat-like domain AMD13_RS16145 PF03932 CutC family AMD13_RS16150 PF01112 Asparaginase AMD13_RS16160 PF13302 Acetyltransferase (GNAT) domain AMD13_RS16165 PF01584 CheW-like domain AMD13_RS16170 PF01339 CheB methylesterase AMD13_RS16175 PF00072 Response regulator receiver domain AMD13_RS16175 PF01584 CheW-like domain AMD13_RS16175 PF01627 Hpt domain AMD13_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS16175 PF02895 Signal transducing histidine kinase, homodimeric domain AMD13_RS16180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS16185 PF01584 CheW-like domain AMD13_RS16190 PF00072 Response regulator receiver domain AMD13_RS16195 PF00072 Response regulator receiver domain AMD13_RS16200 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD13_RS16200 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD13_RS16205 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS16210 PF03747 ADP-ribosylglycohydrolase AMD13_RS16215 PF00814 Glycoprotease family AMD13_RS16220 PF00270 DEAD/DEAH box helicase AMD13_RS16220 PF13307 Helicase C-terminal domain AMD13_RS16230 PF00905 Penicillin binding protein transpeptidase domain AMD13_RS16230 PF00912 Transglycosylase AMD13_RS16230 PF14814 Bifunctional transglycosylase second domain AMD13_RS16235 PF00535 Glycosyl transferase family 2 AMD13_RS16235 PF13692 Glycosyl transferases group 1 AMD13_RS16245 PF02824 TGS domain AMD13_RS16245 PF04607 Region found in RelA / SpoT proteins AMD13_RS16245 PF13291 ACT domain AMD13_RS16245 PF13328 HD domain AMD13_RS16250 PF12706 Beta-lactamase superfamily domain AMD13_RS16255 PF03070 TENA/THI-4/PQQC family AMD13_RS16260 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD13_RS16265 PF04055 Radical SAM superfamily AMD13_RS16265 PF13186 Iron-sulfur cluster-binding domain AMD13_RS16265 PF13353 4Fe-4S single cluster domain AMD13_RS16275 PF10142 PhoPQ-activated pathogenicity-related protein AMD13_RS16280 PF02685 Glucokinase AMD13_RS16285 PF00593 TonB dependent receptor AMD13_RS16285 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16290 PF00270 DEAD/DEAH box helicase AMD13_RS16290 PF00271 Helicase conserved C-terminal domain AMD13_RS16290 PF04408 Helicase associated domain (HA2) AMD13_RS16290 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD13_RS16290 PF11898 AMD13_RS16290 AMD13_RS16295 PF00210 Ferritin-like domain AMD13_RS16300 PF00270 DEAD/DEAH box helicase AMD13_RS16300 PF00271 Helicase conserved C-terminal domain AMD13_RS16300 PF00570 HRDC domain AMD13_RS16300 PF09382 RQC domain AMD13_RS16300 PF16124 AMD13_RS16300 AMD13_RS16310 PF00072 Response regulator receiver domain AMD13_RS16320 PF01479 S4 domain AMD13_RS16335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS16335 PF00672 HAMP domain AMD13_RS16335 PF12729 AMD13_RS16335 AMD13_RS16340 PF01810 AMD13_RS16340 AMD13_RS16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS16345 PF03466 LysR substrate binding domain AMD13_RS16350 PF00072 Response regulator receiver domain AMD13_RS16355 PF07536 AMD13_RS16355 AMD13_RS16355 PF08448 PAS fold AMD13_RS16360 PF06508 Queuosine biosynthesis protein QueC AMD13_RS16370 PF04055 Radical SAM superfamily AMD13_RS16370 PF13394 4Fe-4S single cluster domain AMD13_RS16375 PF13525 Outer membrane lipoprotein AMD13_RS16375 PF16331 AMD13_RS16375 AMD13_RS16380 PF00691 OmpA family AMD13_RS16385 PF04052 TolB amino-terminal domain AMD13_RS16385 PF07676 WD40-like Beta Propeller Repeat AMD13_RS16390 PF13103 TonB C terminal AMD13_RS16395 PF02472 Biopolymer transport protein ExbD/TolR AMD13_RS16400 PF01618 AMD13_RS16400 AMD13_RS16405 PF03061 Thioesterase superfamily AMD13_RS16410 PF05491 Holliday junction DNA helicase ruvB C-terminus AMD13_RS16410 PF05496 Holliday junction DNA helicase ruvB N-terminus AMD13_RS16420 PF02705 AMD13_RS16420 AMD13_RS16425 PF01330 RuvA N terminal domain AMD13_RS16425 PF07499 RuvA, C-terminal domain AMD13_RS16425 PF14520 Helix-hairpin-helix domain AMD13_RS16430 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD13_RS16435 PF01709 Transcriptional regulator AMD13_RS16440 PF12697 Alpha/beta hydrolase family AMD13_RS16445 PF13673 Acetyltransferase (GNAT) domain AMD13_RS16450 PF00152 tRNA synthetases class II (D, K and N) AMD13_RS16450 PF01336 OB-fold nucleic acid binding domain AMD13_RS16450 PF02938 GAD domain AMD13_RS16455 PF11218 AMD13_RS16455 AMD13_RS16460 PF09723 AMD13_RS16460 AMD13_RS16465 PF07690 Major Facilitator Superfamily AMD13_RS16470 PF00593 TonB dependent receptor AMD13_RS16470 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16485 PF13354 Beta-lactamase enzyme family AMD13_RS16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS16490 PF03466 LysR substrate binding domain AMD13_RS16495 PF14317 AMD13_RS16495 AMD13_RS16500 PF00005 ABC transporter AMD13_RS16500 PF12848 ABC transporter AMD13_RS16500 PF16326 AMD13_RS16500 AMD13_RS16505 PF00593 TonB dependent receptor AMD13_RS16505 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS16520 PF00593 TonB dependent receptor AMD13_RS16520 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16525 PF00593 TonB dependent receptor AMD13_RS16525 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16530 PF00067 Cytochrome P450 AMD13_RS16535 PF00999 Sodium/hydrogen exchanger family AMD13_RS16535 PF02254 TrkA-N domain AMD13_RS16555 PF03328 HpcH/HpaI aldolase/citrate lyase family AMD13_RS16560 PF00593 TonB dependent receptor AMD13_RS16560 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16565 PF02655 ATP-grasp domain AMD13_RS16570 PF04183 IucA / IucC family AMD13_RS16570 PF06276 Ferric iron reductase FhuF-like transporter AMD13_RS16575 PF07690 Major Facilitator Superfamily AMD13_RS16580 PF04183 IucA / IucC family AMD13_RS16580 PF06276 Ferric iron reductase FhuF-like transporter AMD13_RS16585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD13_RS16585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD13_RS16600 PF02654 AMD13_RS16600 AMD13_RS16605 PF00300 Histidine phosphatase superfamily (branch 1) AMD13_RS16610 PF02277 Phosphoribosyltransferase AMD13_RS16615 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD13_RS16620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD13_RS16620 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD13_RS16625 PF00155 Aminotransferase class I and II AMD13_RS16630 PF03186 AMD13_RS16630 AMD13_RS16635 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD13_RS16635 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD13_RS16650 PF00593 TonB dependent receptor AMD13_RS16650 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16655 PF00004 ATPase family associated with various cellular activities (AAA) AMD13_RS16655 PF02861 Clp amino terminal domain AMD13_RS16655 PF07724 AAA domain (Cdc48 subfamily) AMD13_RS16655 PF10431 C-terminal, D2-small domain, of ClpB protein AMD13_RS16660 PF00005 ABC transporter AMD13_RS16665 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS16670 PF09084 NMT1/THI5 like AMD13_RS16675 PF00248 Aldo/keto reductase family AMD13_RS16680 PF00296 Luciferase-like monooxygenase AMD13_RS16685 PF00593 TonB dependent receptor AMD13_RS16685 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16690 PF01541 GIY-YIG catalytic domain AMD13_RS16695 PF14497 Glutathione S-transferase, C-terminal domain AMD13_RS16700 PF11219 AMD13_RS16700 AMD13_RS16705 PF07007 Protein of unknown function (DUF1311) AMD13_RS16720 PF12098 AMD13_RS16720 AMD13_RS16725 PF00593 TonB dependent receptor AMD13_RS16725 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS16730 PF02358 Trehalose-phosphatase AMD13_RS16735 PF00723 Glycosyl hydrolases family 15 AMD13_RS16740 PF00982 Glycosyltransferase family 20 AMD13_RS16745 PF01011 PQQ enzyme repeat AMD13_RS16745 PF13360 PQQ-like domain AMD13_RS16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS16755 PF04134 AMD13_RS16755 AMD13_RS16760 PF13761 AMD13_RS16760 AMD13_RS16765 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD13_RS16770 PF00849 RNA pseudouridylate synthase AMD13_RS16775 PF13525 Outer membrane lipoprotein AMD13_RS16785 PF00795 Carbon-nitrogen hydrolase AMD13_RS16785 PF02540 NAD synthase AMD13_RS16790 PF04480 Protein of unknown function (DUF559) AMD13_RS16795 PF01527 Transposase AMD13_RS16805 PF13333 AMD13_RS16805 AMD13_RS16815 PF01471 Putative peptidoglycan binding domain AMD13_RS16815 PF13406 Transglycosylase SLT domain AMD13_RS16820 PF01526 AMD13_RS16820 AMD13_RS16820 PF13700 AMD13_RS16820 AMD13_RS16825 PF00589 Phage integrase family AMD13_RS16835 PF11740 AMD13_RS16835 AMD13_RS16840 PF01129 NAD:arginine ADP-ribosyltransferase AMD13_RS16855 PF12760 Transposase zinc-ribbon domain AMD13_RS16855 PF12762 AMD13_RS16855 AMD13_RS16860 PF00549 CoA-ligase AMD13_RS16860 PF02629 CoA binding domain AMD13_RS16865 PF00549 CoA-ligase AMD13_RS16865 PF08442 ATP-grasp domain AMD13_RS16870 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS16875 PF00072 Response regulator receiver domain AMD13_RS16875 PF00158 Sigma-54 interaction domain AMD13_RS16875 PF02954 Bacterial regulatory protein, Fis family AMD13_RS16890 PF00437 Type II/IV secretion system protein AMD13_RS16890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD13_RS16895 PF00114 Pilin (bacterial filament) AMD13_RS16895 PF13633 Prokaryotic N-terminal methylation site AMD13_RS16900 PF00114 Pilin (bacterial filament) AMD13_RS16900 PF13633 Prokaryotic N-terminal methylation site AMD13_RS16905 PF00482 Type II secretion system (T2SS), protein F AMD13_RS16910 PF01478 Type IV leader peptidase family AMD13_RS16910 PF06750 AMD13_RS16910 AMD13_RS16915 PF01121 Dephospho-CoA kinase AMD13_RS16920 PF05593 AMD13_RS16920 AMD13_RS16925 PF08845 AMD13_RS16925 AMD13_RS16930 PF01527 Transposase AMD13_RS16935 PF00665 Integrase core domain AMD13_RS16935 PF13276 AMD13_RS16935 AMD13_RS16940 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS16940 PF00672 HAMP domain AMD13_RS16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS16945 PF00072 Response regulator receiver domain AMD13_RS16945 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS16955 PF08443 RimK-like ATP-grasp domain AMD13_RS16960 PF00128 Alpha amylase, catalytic domain AMD13_RS16960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD13_RS16965 PF00816 H-NS histone family AMD13_RS16975 PF00565 Staphylococcal nuclease homologue AMD13_RS16985 PF03389 MobA/MobL family AMD13_RS16995 PF03167 Uracil DNA glycosylase superfamily AMD13_RS17000 PF14412 AMD13_RS17000 AMD13_RS17005 PF07791 AMD13_RS17005 AMD13_RS17015 PF04002 RadC-like JAB domain AMD13_RS17030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS17040 PF08448 PAS fold AMD13_RS17045 PF00072 Response regulator receiver domain AMD13_RS17060 PF04940 Sensors of blue-light using FAD AMD13_RS17085 PF01527 Transposase AMD13_RS17090 PF00665 Integrase core domain AMD13_RS17100 PF16162 AMD13_RS17100 AMD13_RS17110 PF13560 Helix-turn-helix domain AMD13_RS17130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS17130 PF08448 PAS fold AMD13_RS17140 PF02517 CAAX protease self-immunity AMD13_RS17155 PF13676 TIR domain AMD13_RS17160 PF00589 Phage integrase family AMD13_RS17170 PF00657 GDSL-like Lipase/Acylhydrolase AMD13_RS17170 PF03797 Autotransporter beta-domain AMD13_RS17175 PF02597 ThiS family AMD13_RS17180 PF05690 Thiazole biosynthesis protein ThiG AMD13_RS17185 PF02390 Putative methyltransferase AMD13_RS17190 PF02080 TrkA-C domain AMD13_RS17190 PF03600 Citrate transporter AMD13_RS17195 PF00355 Rieske [2Fe-2S] domain AMD13_RS17205 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD13_RS17210 PF01741 Large-conductance mechanosensitive channel, MscL AMD13_RS17215 PF04389 Peptidase family M28 AMD13_RS17225 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS17225 PF13377 Periplasmic binding protein-like domain AMD13_RS17230 PF00593 TonB dependent receptor AMD13_RS17230 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17235 PF00703 Glycosyl hydrolases family 2 AMD13_RS17235 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD13_RS17235 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD13_RS17235 PF13385 Concanavalin A-like lectin/glucanases superfamily AMD13_RS17240 PF10566 Glycoside hydrolase 97 AMD13_RS17240 PF14508 Glycosyl-hydrolase 97 N-terminal AMD13_RS17240 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD13_RS17245 PF03080 AMD13_RS17245 AMD13_RS17250 PF00135 Carboxylesterase family AMD13_RS17255 PF00588 SpoU rRNA Methylase family AMD13_RS17255 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD13_RS17260 PF13302 Acetyltransferase (GNAT) domain AMD13_RS17265 PF01433 Peptidase family M1 AMD13_RS17265 PF11838 ERAP1-like C-terminal domain AMD13_RS17270 PF07791 AMD13_RS17270 AMD13_RS17275 PF13333 AMD13_RS17275 AMD13_RS17285 PF01527 Transposase AMD13_RS17290 PF07791 AMD13_RS17290 AMD13_RS17315 PF00873 AcrB/AcrD/AcrF family AMD13_RS17320 PF16576 AMD13_RS17320 AMD13_RS17325 PF00009 Elongation factor Tu GTP binding domain AMD13_RS17325 PF01583 Adenylylsulphate kinase AMD13_RS17330 PF01507 Phosphoadenosine phosphosulfate reductase family AMD13_RS17335 PF00175 Oxidoreductase NAD-binding domain AMD13_RS17335 PF00258 Flavodoxin AMD13_RS17335 PF00667 FAD binding domain AMD13_RS17340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD13_RS17340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD13_RS17345 PF01507 Phosphoadenosine phosphosulfate reductase family AMD13_RS17350 PF03929 AMD13_RS17350 AMD13_RS17355 PF00593 TonB dependent receptor AMD13_RS17355 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17365 PF01590 GAF domain AMD13_RS17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS17380 PF03466 LysR substrate binding domain AMD13_RS17385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD13_RS17390 PF00291 Pyridoxal-phosphate dependent enzyme AMD13_RS17395 PF04191 Phospholipid methyltransferase AMD13_RS17400 PF01661 Macro domain AMD13_RS17405 PF00274 Fructose-bisphosphate aldolase class-I AMD13_RS17410 PF00224 Pyruvate kinase, barrel domain AMD13_RS17410 PF02887 Pyruvate kinase, alpha/beta domain AMD13_RS17415 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS17420 PF00162 Phosphoglycerate kinase AMD13_RS17425 PF13163 AMD13_RS17425 AMD13_RS17430 PF10101 AMD13_RS17430 AMD13_RS17440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD13_RS17440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD13_RS17445 PF08332 Calcium/calmodulin dependent protein kinase II Association AMD13_RS17450 PF03922 OmpW family AMD13_RS17455 PF03922 OmpW family AMD13_RS17460 PF02265 S1/P1 Nuclease AMD13_RS17465 PF00753 Metallo-beta-lactamase superfamily AMD13_RS17470 PF13531 Bacterial extracellular solute-binding protein AMD13_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS17480 PF00005 ABC transporter AMD13_RS17490 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS17490 PF05569 BlaR1 peptidase M56 AMD13_RS17495 PF03965 Penicillinase repressor AMD13_RS17500 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AMD13_RS17505 PF16670 AMD13_RS17505 AMD13_RS17510 PF00593 TonB dependent receptor AMD13_RS17510 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17515 PF01471 Putative peptidoglycan binding domain AMD13_RS17515 PF03734 L,D-transpeptidase catalytic domain AMD13_RS17520 PF01551 Peptidase family M23 AMD13_RS17530 PF00593 TonB dependent receptor AMD13_RS17530 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17545 PF00456 Transketolase, thiamine diphosphate binding domain AMD13_RS17545 PF02779 Transketolase, pyrimidine binding domain AMD13_RS17545 PF02780 Transketolase, C-terminal domain AMD13_RS17550 PF00375 Sodium:dicarboxylate symporter family AMD13_RS17555 PF13584 AMD13_RS17555 AMD13_RS17560 PF00515 Tetratricopeptide repeat AMD13_RS17560 PF13519 von Willebrand factor type A domain AMD13_RS17565 PF00092 von Willebrand factor type A domain AMD13_RS17570 PF14316 AMD13_RS17570 AMD13_RS17575 PF01882 AMD13_RS17575 AMD13_RS17580 PF07726 ATPase family associated with various cellular activities (AAA) AMD13_RS17585 PF00263 AMD13_RS17585 AMD13_RS17585 PF03958 Bacterial type II/III secretion system short domain AMD13_RS17585 PF07660 Secretin and TonB N terminus short domain AMD13_RS17590 PF04351 Pilus assembly protein, PilP AMD13_RS17595 PF04350 Pilus assembly protein, PilO AMD13_RS17600 PF05137 AMD13_RS17600 AMD13_RS17605 PF11104 Type IV pilus assembly protein PilM; AMD13_RS17610 PF00905 Penicillin binding protein transpeptidase domain AMD13_RS17610 PF00912 Transglycosylase AMD13_RS17610 PF17092 AMD13_RS17610 AMD13_RS17620 PF00285 Citrate synthase AMD13_RS17625 PF01197 Ribosomal protein L31 AMD13_RS17630 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD13_RS17635 PF00270 DEAD/DEAH box helicase AMD13_RS17635 PF00271 Helicase conserved C-terminal domain AMD13_RS17635 PF17191 AMD13_RS17635 AMD13_RS17640 PF01042 Endoribonuclease L-PSP AMD13_RS17645 PF02824 TGS domain AMD13_RS17645 PF04607 Region found in RelA / SpoT proteins AMD13_RS17645 PF13291 ACT domain AMD13_RS17645 PF13328 HD domain AMD13_RS17650 PF01192 RNA polymerase Rpb6 AMD13_RS17655 PF00625 Guanylate kinase AMD13_RS17660 PF03755 AMD13_RS17660 AMD13_RS17660 PF08340 AMD13_RS17660 AMD13_RS17665 PF01138 3' exoribonuclease family, domain 1 AMD13_RS17665 PF03725 3' exoribonuclease family, domain 2 AMD13_RS17670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS17675 PF01725 Ham1 family AMD13_RS17680 PF04055 Radical SAM superfamily AMD13_RS17680 PF06969 HemN C-terminal domain AMD13_RS17685 PF07793 AMD13_RS17685 AMD13_RS17690 PF07238 PilZ domain AMD13_RS17695 PF00557 Metallopeptidase family M24 AMD13_RS17705 PF00557 Metallopeptidase family M24 AMD13_RS17705 PF05195 Aminopeptidase P, N-terminal domain AMD13_RS17710 PF03695 Uncharacterised protein family (UPF0149) AMD13_RS17720 PF05164 Cell division protein ZapA AMD13_RS17725 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD13_RS17730 PF01878 EVE domain AMD13_RS17735 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD13_RS17740 PF02643 Uncharacterized ACR, COG1430 AMD13_RS17745 PF13369 AMD13_RS17745 AMD13_RS17745 PF13371 Tetratricopeptide repeat AMD13_RS17750 PF00301 Rubredoxin AMD13_RS17755 PF02581 Thiamine monophosphate synthase/TENI AMD13_RS17760 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17770 PF00202 Aminotransferase class-III AMD13_RS17775 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS17775 PF13424 Tetratricopeptide repeat AMD13_RS17775 PF13481 AAA domain AMD13_RS17780 PF00127 Copper binding proteins, plastocyanin/azurin family AMD13_RS17785 PF00155 Aminotransferase class I and II AMD13_RS17790 PF01042 Endoribonuclease L-PSP AMD13_RS17795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD13_RS17800 PF01593 Flavin containing amine oxidoreductase AMD13_RS17805 PF00593 TonB dependent receptor AMD13_RS17805 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17815 PF00202 Aminotransferase class-III AMD13_RS17820 PF00520 Ion transport protein AMD13_RS17825 PF00106 short chain dehydrogenase AMD13_RS17835 PF01569 PAP2 superfamily AMD13_RS17835 PF09335 AMD13_RS17835 AMD13_RS17835 PF14067 AMD13_RS17835 AMD13_RS17840 PF01062 AMD13_RS17840 AMD13_RS17845 PF02190 ATP-dependent protease La (LON) domain AMD13_RS17850 PF01225 Mur ligase family, catalytic domain AMD13_RS17850 PF02875 Mur ligase family, glutamate ligase domain AMD13_RS17850 PF08245 Mur ligase middle domain AMD13_RS17855 PF00406 Adenylate kinase AMD13_RS17860 PF00365 Phosphofructokinase AMD13_RS17870 PF03030 Inorganic H+ pyrophosphatase AMD13_RS17880 PF00719 Inorganic pyrophosphatase AMD13_RS17885 PF08668 HDOD domain AMD13_RS17890 PF00593 TonB dependent receptor AMD13_RS17890 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17895 PF12833 Helix-turn-helix domain AMD13_RS17900 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS17900 PF07676 WD40-like Beta Propeller Repeat AMD13_RS17905 PF01964 ThiC family AMD13_RS17905 PF13667 ThiC-associated domain AMD13_RS17910 PF00593 TonB dependent receptor AMD13_RS17910 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS17915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS17920 PF01019 Gamma-glutamyltranspeptidase AMD13_RS17925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD13_RS17925 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AMD13_RS17930 PF00205 Thiamine pyrophosphate enzyme, central domain AMD13_RS17930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD13_RS17930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD13_RS17935 PF13710 ACT domain AMD13_RS17940 PF00291 Pyridoxal-phosphate dependent enzyme AMD13_RS17945 PF00682 HMGL-like AMD13_RS17945 PF08502 LeuA allosteric (dimerisation) domain AMD13_RS17950 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD13_RS17955 PF00694 Aconitase C-terminal domain AMD13_RS17960 PF00330 Aconitase family (aconitate hydratase) AMD13_RS17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS17965 PF03466 LysR substrate binding domain AMD13_RS17970 PF00990 GGDEF domain AMD13_RS17970 PF07494 Two component regulator propeller AMD13_RS17970 PF07495 Y_Y_Y domain AMD13_RS17975 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS17975 PF14246 AefR-like transcriptional repressor, C-terminal region AMD13_RS17980 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AMD13_RS17985 PF02321 Outer membrane efflux protein AMD13_RS17990 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD13_RS17995 PF03279 AMD13_RS17995 AMD13_RS18000 PF04932 AMD13_RS18000 AMD13_RS18005 PF00534 Glycosyl transferases group 1 AMD13_RS18005 PF13439 Glycosyltransferase Family 4 AMD13_RS18010 PF10276 Zinc-finger domain AMD13_RS18015 PF07971 Glycosyl hydrolase family 92 AMD13_RS18020 PF00390 Malic enzyme, N-terminal domain AMD13_RS18020 PF01515 Phosphate acetyl/butaryl transferase AMD13_RS18020 PF03949 Malic enzyme, NAD binding domain AMD13_RS18025 PF00375 Sodium:dicarboxylate symporter family AMD13_RS18030 PF07396 Phosphate-selective porin O and P AMD13_RS18035 PF00072 Response regulator receiver domain AMD13_RS18035 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS18035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS18035 PF02743 Cache domain AMD13_RS18035 PF12860 AMD13_RS18035 AMD13_RS18040 PF00083 Sugar (and other) transporter AMD13_RS18045 PF13531 Bacterial extracellular solute-binding protein AMD13_RS18050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS18050 PF03466 LysR substrate binding domain AMD13_RS18055 PF00248 Aldo/keto reductase family AMD13_RS18060 PF12680 SnoaL-like domain AMD13_RS18065 PF11512 Agrobacterium tumefaciens protein Atu4866 AMD13_RS18070 PF00072 Response regulator receiver domain AMD13_RS18070 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS18075 PF13531 Bacterial extracellular solute-binding protein AMD13_RS18080 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS18080 PF08521 AMD13_RS18080 AMD13_RS18085 PF00072 Response regulator receiver domain AMD13_RS18085 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS18090 PF07396 Phosphate-selective porin O and P AMD13_RS18095 PF03600 Citrate transporter AMD13_RS18100 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS18105 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS18105 PF13377 Periplasmic binding protein-like domain AMD13_RS18110 PF07690 Major Facilitator Superfamily AMD13_RS18115 PF00593 TonB dependent receptor AMD13_RS18115 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS18120 PF00128 Alpha amylase, catalytic domain AMD13_RS18125 PF01965 DJ-1/PfpI family AMD13_RS18130 PF08014 AMD13_RS18130 AMD13_RS18135 PF03193 Protein of unknown function, DUF258 AMD13_RS18140 PF00155 Aminotransferase class I and II AMD13_RS18145 PF13472 GDSL-like Lipase/Acylhydrolase family AMD13_RS18150 PF08242 Methyltransferase domain AMD13_RS18155 PF00593 TonB dependent receptor AMD13_RS18155 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS18160 PF01522 Polysaccharide deacetylase AMD13_RS18165 PF00462 Glutaredoxin AMD13_RS18165 PF00581 Rhodanese-like domain AMD13_RS18175 PF06041 Bacterial protein of unknown function (DUF924) AMD13_RS18180 PF01527 Transposase AMD13_RS18185 PF13683 AMD13_RS18185 AMD13_RS18190 PF09284 Rhamnogalacturonase B, N-terminal AMD13_RS18190 PF14683 Polysaccharide lyase family 4, domain III AMD13_RS18190 PF14686 Polysaccharide lyase family 4, domain II AMD13_RS18200 PF02645 Uncharacterised protein, DegV family COG1307 AMD13_RS18205 PF01327 Polypeptide deformylase AMD13_RS18210 PF03960 ArsC family AMD13_RS18220 PF02225 PA domain AMD13_RS18225 PF05420 AMD13_RS18225 AMD13_RS18225 PF13432 Tetratricopeptide repeat AMD13_RS18225 PF14559 Tetratricopeptide repeat AMD13_RS18230 PF01270 Glycosyl hydrolases family 8 AMD13_RS18235 PF03170 Bacterial cellulose synthase subunit AMD13_RS18240 PF00535 Glycosyl transferase family 2 AMD13_RS18240 PF07238 PilZ domain AMD13_RS18255 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD13_RS18275 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD13_RS18275 PF13641 Glycosyltransferase like family 2 AMD13_RS18285 PF00535 Glycosyl transferase family 2 AMD13_RS18295 PF01636 Phosphotransferase enzyme family AMD13_RS18305 PF04973 AMD13_RS18305 AMD13_RS18310 PF00392 Bacterial regulatory proteins, gntR family AMD13_RS18310 PF07702 UTRA domain AMD13_RS18320 PF00263 AMD13_RS18320 AMD13_RS18320 PF03958 Bacterial type II/III secretion system short domain AMD13_RS18330 PF10741 AMD13_RS18330 AMD13_RS18335 PF05137 AMD13_RS18335 AMD13_RS18340 PF03934 Type II secretion system (T2SS), protein K AMD13_RS18350 PF13544 AMD13_RS18350 AMD13_RS18355 PF12019 Type II transport protein GspH AMD13_RS18360 PF08334 Type II secretion system (T2SS), protein G AMD13_RS18365 PF00482 Type II secretion system (T2SS), protein F AMD13_RS18370 PF00437 Type II/IV secretion system protein AMD13_RS18370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD13_RS18375 PF00082 Subtilase family AMD13_RS18375 PF04151 Bacterial pre-peptidase C-terminal domain AMD13_RS18380 PF05658 Head domain of trimeric autotransporter adhesin AMD13_RS18380 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD13_RS18380 PF13018 AMD13_RS18380 AMD13_RS18385 PF00082 Subtilase family AMD13_RS18385 PF04151 Bacterial pre-peptidase C-terminal domain AMD13_RS18390 PF03895 YadA-like C-terminal region AMD13_RS18390 PF05658 Head domain of trimeric autotransporter adhesin AMD13_RS18390 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD13_RS18400 PF02769 AIR synthase related protein, C-terminal domain AMD13_RS18400 PF13507 CobB/CobQ-like glutamine amidotransferase domain AMD13_RS18405 PF10411 Disulfide bond isomerase protein N-terminus AMD13_RS18405 PF13098 Thioredoxin-like domain AMD13_RS18410 PF00589 Phage integrase family AMD13_RS18410 PF02899 Phage integrase, N-terminal SAM-like domain AMD13_RS18415 PF06271 AMD13_RS18415 AMD13_RS18425 PF03739 AMD13_RS18425 AMD13_RS18430 PF03739 AMD13_RS18430 AMD13_RS18435 PF00883 Cytosol aminopeptidase family, catalytic domain AMD13_RS18435 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD13_RS18445 PF04364 DNA polymerase III chi subunit, HolC AMD13_RS18450 PF00133 tRNA synthetases class I (I, L, M and V) AMD13_RS18450 PF08264 Anticodon-binding domain of tRNA AMD13_RS18450 PF10458 Valyl tRNA synthetase tRNA binding arm AMD13_RS18455 PF00593 TonB dependent receptor AMD13_RS18455 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS18460 PF01464 Transglycosylase SLT domain AMD13_RS18460 PF14718 Soluble lytic murein transglycosylase L domain AMD13_RS18465 PF00544 Pectate lyase AMD13_RS18470 PF00583 Acetyltransferase (GNAT) family AMD13_RS18480 PF01066 CDP-alcohol phosphatidyltransferase AMD13_RS18485 PF13511 AMD13_RS18485 AMD13_RS18490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD13_RS18490 PF03129 Anticodon binding domain AMD13_RS18490 PF04073 Aminoacyl-tRNA editing domain AMD13_RS18495 PF00816 H-NS histone family AMD13_RS18500 PF06738 AMD13_RS18500 AMD13_RS18500 PF12821 AMD13_RS18500 AMD13_RS18505 PF02405 AMD13_RS18505 AMD13_RS18510 PF00005 ABC transporter AMD13_RS18515 PF02470 AMD13_RS18515 AMD13_RS18520 PF03886 Protein of unknown function (DUF330) AMD13_RS18525 PF13532 2OG-Fe(II) oxygenase superfamily AMD13_RS18530 PF01946 Thi4 family AMD13_RS18530 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AMD13_RS18535 PF05045 AMD13_RS18535 AMD13_RS18535 PF14307 AMD13_RS18535 AMD13_RS18540 PF01144 Coenzyme A transferase AMD13_RS18545 PF01144 Coenzyme A transferase AMD13_RS18550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD13_RS18550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD13_RS18550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD13_RS18550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD13_RS18555 PF00483 Nucleotidyl transferase AMD13_RS18555 PF01050 Mannose-6-phosphate isomerase AMD13_RS18560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD13_RS18560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD13_RS18560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD13_RS18565 PF04321 RmlD substrate binding domain AMD13_RS18570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD13_RS18575 PF00483 Nucleotidyl transferase AMD13_RS18580 PF16363 AMD13_RS18580 AMD13_RS18585 PF01012 Electron transfer flavoprotein domain AMD13_RS18590 PF00766 Electron transfer flavoprotein FAD-binding domain AMD13_RS18590 PF01012 Electron transfer flavoprotein domain AMD13_RS18595 PF03706 AMD13_RS18595 AMD13_RS18600 PF01040 UbiA prenyltransferase family AMD13_RS18605 PF01565 FAD binding domain AMD13_RS18610 PF00106 short chain dehydrogenase AMD13_RS18620 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS18625 PF01593 Flavin containing amine oxidoreductase AMD13_RS18630 PF04138 AMD13_RS18630 AMD13_RS18640 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AMD13_RS18650 PF00535 Glycosyl transferase family 2 AMD13_RS18660 PF00005 ABC transporter AMD13_RS18660 PF14524 Wzt C-terminal domain AMD13_RS18665 PF01061 AMD13_RS18665 AMD13_RS18670 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD13_RS18675 PF00291 Pyridoxal-phosphate dependent enzyme AMD13_RS18675 PF00571 CBS domain AMD13_RS18680 PF04325 Protein of unknown function (DUF465) AMD13_RS18690 PF14346 Domain of unknown function (DUF4398) AMD13_RS18695 PF00437 Type II/IV secretion system protein AMD13_RS18705 PF13410 Glutathione S-transferase, C-terminal domain AMD13_RS18705 PF13417 Glutathione S-transferase, N-terminal domain AMD13_RS18710 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD13_RS18715 PF00270 DEAD/DEAH box helicase AMD13_RS18715 PF00271 Helicase conserved C-terminal domain AMD13_RS18720 PF02225 PA domain AMD13_RS18725 PF00593 TonB dependent receptor AMD13_RS18725 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS18730 PF01242 6-pyruvoyl tetrahydropterin synthase AMD13_RS18735 PF09361 AMD13_RS18735 AMD13_RS18740 PF13500 AAA domain AMD13_RS18750 PF13185 GAF domain AMD13_RS18755 PF04994 TfoX C-terminal domain AMD13_RS18760 PF00756 Putative esterase AMD13_RS18765 PF00593 TonB dependent receptor AMD13_RS18765 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS18770 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS18775 PF00817 impB/mucB/samB family AMD13_RS18775 PF11799 impB/mucB/samB family C-terminal domain AMD13_RS18780 PF07977 FabA-like domain AMD13_RS18785 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD13_RS18785 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD13_RS18795 PF01432 Peptidase family M3 AMD13_RS18800 PF00291 Pyridoxal-phosphate dependent enzyme AMD13_RS18810 PF00394 Multicopper oxidase AMD13_RS18810 PF07731 Multicopper oxidase AMD13_RS18810 PF07732 Multicopper oxidase AMD13_RS18815 PF05275 AMD13_RS18815 AMD13_RS18820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD13_RS18830 PF01471 Putative peptidoglycan binding domain AMD13_RS18845 PF01380 SIS domain AMD13_RS18845 PF13522 Glutamine amidotransferase domain AMD13_RS18850 PF13437 HlyD family secretion protein AMD13_RS18850 PF13533 Biotin-lipoyl like AMD13_RS18855 PF00005 ABC transporter AMD13_RS18860 PF02687 AMD13_RS18860 AMD13_RS18860 PF12704 MacB-like periplasmic core domain AMD13_RS18865 PF02687 AMD13_RS18865 AMD13_RS18865 PF12704 MacB-like periplasmic core domain AMD13_RS18875 PF00072 Response regulator receiver domain AMD13_RS18875 PF00158 Sigma-54 interaction domain AMD13_RS18880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS18885 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS18885 PF12804 MobA-like NTP transferase domain AMD13_RS18885 PF14602 Hexapeptide repeat of succinyl-transferase AMD13_RS18890 PF04138 AMD13_RS18890 AMD13_RS18895 PF01817 Chorismate mutase type II AMD13_RS18900 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD13_RS18900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD13_RS18905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD13_RS18905 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD13_RS18910 PF00231 ATP synthase AMD13_RS18915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD13_RS18915 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD13_RS18915 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD13_RS18920 PF00213 ATP synthase delta (OSCP) subunit AMD13_RS18925 PF00430 ATP synthase B/B' CF(0) AMD13_RS18930 PF00137 ATP synthase subunit C AMD13_RS18935 PF00119 ATP synthase A chain AMD13_RS18955 PF00364 Biotin-requiring enzyme AMD13_RS18955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD13_RS18955 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS18965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD13_RS18965 PF00364 Biotin-requiring enzyme AMD13_RS18965 PF02817 e3 binding domain AMD13_RS18970 PF11101 AMD13_RS18970 AMD13_RS18975 PF03167 Uracil DNA glycosylase superfamily AMD13_RS18980 PF03922 OmpW family AMD13_RS19005 PF03180 NLPA lipoprotein AMD13_RS19010 PF00528 Binding-protein-dependent transport system inner membrane component AMD13_RS19015 PF00005 ABC transporter AMD13_RS19015 PF09383 NIL domain AMD13_RS19020 PF00892 EamA-like transporter family AMD13_RS19025 PF04461 Protein of unknown function (DUF520) AMD13_RS19035 PF00072 Response regulator receiver domain AMD13_RS19035 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS19040 PF12146 Putative lysophospholipase AMD13_RS19045 PF07209 AMD13_RS19045 AMD13_RS19055 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS19060 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS19065 PF00849 RNA pseudouridylate synthase AMD13_RS19070 PF05175 Methyltransferase small domain AMD13_RS19080 PF07995 Glucose / Sorbosone dehydrogenase AMD13_RS19085 PF11607 Protein of unknown function (DUF3247) AMD13_RS19090 PF00072 Response regulator receiver domain AMD13_RS19090 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS19090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS19090 PF08448 PAS fold AMD13_RS19090 PF13188 PAS domain AMD13_RS19105 PF11454 AMD13_RS19105 AMD13_RS19110 PF00842 Alanine racemase, C-terminal domain AMD13_RS19110 PF01168 Alanine racemase, N-terminal domain AMD13_RS19115 PF01266 FAD dependent oxidoreductase AMD13_RS19120 PF01037 AsnC family AMD13_RS19120 PF13404 AsnC-type helix-turn-helix domain AMD13_RS19130 PF01641 SelR domain AMD13_RS19135 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AMD13_RS19140 PF01618 AMD13_RS19140 AMD13_RS19145 PF00691 OmpA family AMD13_RS19145 PF13677 AMD13_RS19145 AMD13_RS19155 PF13223 AMD13_RS19155 AMD13_RS19165 PF11730 AMD13_RS19165 AMD13_RS19170 PF01061 AMD13_RS19170 AMD13_RS19175 PF00005 ABC transporter AMD13_RS19180 PF00999 Sodium/hydrogen exchanger family AMD13_RS19185 PF02469 Fasciclin domain AMD13_RS19190 PF03167 Uracil DNA glycosylase superfamily AMD13_RS19190 PF13566 AMD13_RS19190 AMD13_RS19195 PF04055 Radical SAM superfamily AMD13_RS19200 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD13_RS19205 PF07681 AMD13_RS19205 AMD13_RS19210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS19210 PF03466 LysR substrate binding domain AMD13_RS19215 PF03358 NADPH-dependent FMN reductase AMD13_RS19220 PF00248 Aldo/keto reductase family AMD13_RS19225 PF00535 Glycosyl transferase family 2 AMD13_RS19230 PF01431 Peptidase family M13 AMD13_RS19230 PF05649 Peptidase family M13 AMD13_RS19235 PF09995 AMD13_RS19235 AMD13_RS19250 PF13520 Amino acid permease AMD13_RS19260 PF00072 Response regulator receiver domain AMD13_RS19260 PF04397 LytTr DNA-binding domain AMD13_RS19265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS19265 PF06580 AMD13_RS19265 AMD13_RS19270 PF01266 FAD dependent oxidoreductase AMD13_RS19280 PF05974 Domain of unknown function (DUF892) AMD13_RS19285 PF05067 Manganese containing catalase AMD13_RS19305 PF01339 CheB methylesterase AMD13_RS19305 PF01739 CheR methyltransferase, SAM binding domain AMD13_RS19305 PF03705 CheR methyltransferase, all-alpha domain AMD13_RS19305 PF07536 AMD13_RS19305 AMD13_RS19305 PF08447 PAS fold AMD13_RS19305 PF13596 PAS domain AMD13_RS19310 PF00072 Response regulator receiver domain AMD13_RS19320 PF00072 Response regulator receiver domain AMD13_RS19320 PF00158 Sigma-54 interaction domain AMD13_RS19320 PF02954 Bacterial regulatory protein, Fis family AMD13_RS19330 PF01654 AMD13_RS19330 AMD13_RS19335 PF02322 AMD13_RS19335 AMD13_RS19350 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS19355 PF16363 AMD13_RS19355 AMD13_RS19360 PF13692 Glycosyl transferases group 1 AMD13_RS19365 PF03275 UDP-galactopyranose mutase AMD13_RS19365 PF13450 NAD(P)-binding Rossmann-like domain AMD13_RS19375 PF00005 ABC transporter AMD13_RS19375 PF00664 ABC transporter transmembrane region AMD13_RS19380 PF12244 AMD13_RS19380 AMD13_RS19385 PF13628 AMD13_RS19385 AMD13_RS19390 PF00107 Zinc-binding dehydrogenase AMD13_RS19390 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS19390 PF13823 Alcohol dehydrogenase GroES-associated AMD13_RS19400 PF03692 AMD13_RS19400 AMD13_RS19415 PF11828 AMD13_RS19415 AMD13_RS19430 PF11445 AMD13_RS19430 AMD13_RS19435 PF00593 TonB dependent receptor AMD13_RS19435 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS19440 PF12040 AMD13_RS19440 AMD13_RS19445 PF12040 AMD13_RS19445 AMD13_RS19445 PF12679 AMD13_RS19445 AMD13_RS19450 PF00005 ABC transporter AMD13_RS19455 PF00246 Zinc carboxypeptidase AMD13_RS19460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS19460 PF03466 LysR substrate binding domain AMD13_RS19465 PF01042 Endoribonuclease L-PSP AMD13_RS19475 PF01527 Transposase AMD13_RS19480 PF00665 Integrase core domain AMD13_RS19490 PF12849 PBP superfamily domain AMD13_RS19495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD13_RS19495 PF00672 HAMP domain AMD13_RS19500 PF01223 DNA/RNA non-specific endonuclease AMD13_RS19505 PF12697 Alpha/beta hydrolase family AMD13_RS19510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS19510 PF03466 LysR substrate binding domain AMD13_RS19515 PF02525 Flavodoxin-like fold AMD13_RS19520 PF03795 YCII-related domain AMD13_RS19530 PF07866 Protein of unknown function (DUF1653) AMD13_RS19555 PF00557 Metallopeptidase family M24 AMD13_RS19560 PF11903 AMD13_RS19560 AMD13_RS19575 PF00140 Sigma-70 factor, region 1 AMD13_RS19575 PF03979 Sigma-70 factor, region 1 AMD13_RS19575 PF04539 Sigma-70 region 3 AMD13_RS19575 PF04542 Sigma-70 region 2 AMD13_RS19575 PF04545 Sigma-70, region 4 AMD13_RS19575 PF04546 Sigma-70, non-essential region AMD13_RS19580 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD13_RS19585 PF03279 AMD13_RS19585 AMD13_RS19590 PF13420 Acetyltransferase (GNAT) domain AMD13_RS19600 PF00925 GTP cyclohydrolase II AMD13_RS19605 PF03703 AMD13_RS19605 AMD13_RS19610 PF03703 AMD13_RS19610 AMD13_RS19615 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD13_RS19620 PF00535 Glycosyl transferase family 2 AMD13_RS19625 PF04932 AMD13_RS19625 AMD13_RS19630 PF13231 AMD13_RS19630 AMD13_RS19635 PF01029 NusB family AMD13_RS19635 PF01189 NOL1/NOP2/sun family AMD13_RS19640 PF00551 Formyl transferase AMD13_RS19640 PF02911 Formyl transferase, C-terminal domain AMD13_RS19645 PF01327 Polypeptide deformylase AMD13_RS19650 PF01476 LysM domain AMD13_RS19655 PF02481 DNA recombination-mediator protein A AMD13_RS19660 PF04361 AMD13_RS19660 AMD13_RS19665 PF00114 Pilin (bacterial filament) AMD13_RS19665 PF14237 AMD13_RS19665 AMD13_RS19670 PF06271 AMD13_RS19670 AMD13_RS19670 PF14237 AMD13_RS19670 AMD13_RS19675 PF01131 DNA topoisomerase AMD13_RS19675 PF01751 Toprim domain AMD13_RS19675 PF13368 AMD13_RS19675 AMD13_RS19680 PF01300 Telomere recombination AMD13_RS19695 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS19705 PF01343 Peptidase family S49 AMD13_RS19710 PF01554 MatE AMD13_RS19715 PF12412 AMD13_RS19715 AMD13_RS19720 PF11304 AMD13_RS19720 AMD13_RS19730 PF00270 DEAD/DEAH box helicase AMD13_RS19730 PF00271 Helicase conserved C-terminal domain AMD13_RS19735 PF13410 Glutathione S-transferase, C-terminal domain AMD13_RS19735 PF13417 Glutathione S-transferase, N-terminal domain AMD13_RS19740 PF01936 NYN domain AMD13_RS19740 PF12872 OST-HTH/LOTUS domain AMD13_RS19750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD13_RS19755 PF03458 AMD13_RS19755 AMD13_RS19760 PF00140 Sigma-70 factor, region 1 AMD13_RS19760 PF04542 Sigma-70 region 2 AMD13_RS19760 PF04545 Sigma-70, region 4 AMD13_RS19765 PF03167 Uracil DNA glycosylase superfamily AMD13_RS19770 PF00072 Response regulator receiver domain AMD13_RS19775 PF02687 AMD13_RS19775 AMD13_RS19780 PF00005 ABC transporter AMD13_RS19785 PF00270 DEAD/DEAH box helicase AMD13_RS19785 PF00271 Helicase conserved C-terminal domain AMD13_RS19785 PF12300 AMD13_RS19785 AMD13_RS19790 PF00085 Thioredoxin AMD13_RS19795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD13_RS19795 PF07497 Rho termination factor, RNA-binding domain AMD13_RS19795 PF07498 Rho termination factor, N-terminal domain AMD13_RS19800 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD13_RS19805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS19805 PF03466 LysR substrate binding domain AMD13_RS19815 PF03971 Monomeric isocitrate dehydrogenase AMD13_RS19825 PF00270 DEAD/DEAH box helicase AMD13_RS19830 PF09704 CRISPR-associated protein (Cas_Cas5) AMD13_RS19840 PF05107 AMD13_RS19840 AMD13_RS19845 PF01930 Domain of unknown function DUF83 AMD13_RS19850 PF01867 CRISPR associated protein Cas1 AMD13_RS19855 PF09827 CRISPR associated protein Cas2 AMD13_RS19865 PF01476 LysM domain AMD13_RS19870 PF14489 QueF-like protein AMD13_RS19870 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD13_RS19875 PF01546 Peptidase family M20/M25/M40 AMD13_RS19875 PF07687 Peptidase dimerisation domain AMD13_RS19880 PF16576 AMD13_RS19880 AMD13_RS19885 PF00873 AcrB/AcrD/AcrF family AMD13_RS19890 PF00873 AcrB/AcrD/AcrF family AMD13_RS19895 PF07063 Domain of unknown function (DUF1338) AMD13_RS19910 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS19915 PF13202 EF hand AMD13_RS19920 PF13202 EF hand AMD13_RS19930 PF14255 AMD13_RS19930 AMD13_RS19935 PF01427 D-ala-D-ala dipeptidase AMD13_RS19940 PF01510 N-acetylmuramoyl-L-alanine amidase AMD13_RS19945 PF00877 NlpC/P60 family AMD13_RS19945 PF12913 SH3 domain of the SH3b1 type AMD13_RS19945 PF12914 SH3 domain of SH3b2 type AMD13_RS19950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD13_RS19950 PF13378 Enolase C-terminal domain-like AMD13_RS19960 PF13520 Amino acid permease AMD13_RS19975 PF05360 AMD13_RS19975 AMD13_RS19980 PF07995 Glucose / Sorbosone dehydrogenase AMD13_RS19985 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD13_RS19985 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD13_RS19985 PF14310 Fibronectin type III-like domain AMD13_RS19990 PF02152 Dihydroneopterin aldolase AMD13_RS19995 PF00814 Glycoprotease family AMD13_RS20000 PF01165 Ribosomal protein S21 AMD13_RS20005 PF09424 Yqey-like protein AMD13_RS20010 PF03631 AMD13_RS20010 AMD13_RS20015 PF01807 CHC2 zinc finger AMD13_RS20015 PF08275 DNA primase catalytic core, N-terminal domain AMD13_RS20015 PF08278 DNA primase DnaG DnaB-binding AMD13_RS20015 PF10410 DnaB-helicase binding domain of primase AMD13_RS20015 PF13155 Toprim-like AMD13_RS20020 PF13593 SBF-like CPA transporter family (DUF4137) AMD13_RS20025 PF13899 Thioredoxin-like AMD13_RS20030 PF01040 UbiA prenyltransferase family AMD13_RS20035 PF02628 AMD13_RS20035 AMD13_RS20045 PF02104 AMD13_RS20045 AMD13_RS20050 PF11137 AMD13_RS20050 AMD13_RS20055 PF00510 Cytochrome c oxidase subunit III AMD13_RS20060 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD13_RS20065 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD13_RS20070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD13_RS20070 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMD13_RS20075 PF10003 AMD13_RS20075 AMD13_RS20080 PF00171 Aldehyde dehydrogenase family AMD13_RS20080 PF01619 Proline dehydrogenase AMD13_RS20080 PF14850 DNA-binding domain of Proline dehydrogenase AMD13_RS20115 PF00579 tRNA synthetases class I (W and Y) AMD13_RS20120 PF01551 Peptidase family M23 AMD13_RS20120 PF04225 Opacity-associated protein A LysM-like domain AMD13_RS20125 PF03702 Uncharacterised protein family (UPF0075) AMD13_RS20135 PF07690 Major Facilitator Superfamily AMD13_RS20140 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS20145 PF00156 Phosphoribosyl transferase domain AMD13_RS20155 PF13614 AAA domain AMD13_RS20160 PF02195 ParB-like nuclease domain AMD13_RS20165 PF11731 AMD13_RS20165 AMD13_RS20170 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS20175 PF00535 Glycosyl transferase family 2 AMD13_RS20180 PF07578 Lipid A Biosynthesis N-terminal domain AMD13_RS20190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD13_RS20190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD13_RS20190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD13_RS20190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD13_RS20195 PF00692 dUTPase AMD13_RS20200 PF02441 Flavoprotein AMD13_RS20200 PF04127 DNA / pantothenate metabolism flavoprotein AMD13_RS20205 PF04002 RadC-like JAB domain AMD13_RS20210 PF00750 tRNA synthetases class I (R) AMD13_RS20210 PF03485 Arginyl tRNA synthetase N terminal domain AMD13_RS20210 PF05746 DALR anticodon binding domain AMD13_RS20215 PF05036 Sporulation related domain AMD13_RS20225 PF00106 short chain dehydrogenase AMD13_RS20230 PF01757 AMD13_RS20230 AMD13_RS20235 PF03033 Glycosyltransferase family 28 N-terminal domain AMD13_RS20240 PF00501 AMP-binding enzyme AMD13_RS20240 PF00550 Phosphopantetheine attachment site AMD13_RS20240 PF00668 Condensation domain AMD13_RS20240 PF00975 Thioesterase domain AMD13_RS20240 PF13193 AMP-binding enzyme C-terminal domain AMD13_RS20250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD13_RS20250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD13_RS20255 PF01564 Spermine/spermidine synthase AMD13_RS20260 PF09851 AMD13_RS20260 AMD13_RS20260 PF14470 Bacterial PH domain AMD13_RS20270 PF13505 Outer membrane protein beta-barrel domain AMD13_RS20280 PF02838 Glycosyl hydrolase family 20, domain 2 AMD13_RS20280 PF07555 beta-N-acetylglucosaminidase AMD13_RS20285 PF00543 Nitrogen regulatory protein P-II AMD13_RS20290 PF04380 AMD13_RS20290 AMD13_RS20295 PF01078 Magnesium chelatase, subunit ChlI AMD13_RS20295 PF13541 Subunit ChlI of Mg-chelatase AMD13_RS20300 PF00589 Phage integrase family AMD13_RS20315 PF02452 PemK-like protein AMD13_RS20320 PF13683 AMD13_RS20320 AMD13_RS20325 PF04471 Restriction endonuclease AMD13_RS20330 PF00580 UvrD/REP helicase N-terminal domain AMD13_RS20330 PF13361 UvrD-like helicase C-terminal domain AMD13_RS20335 PF13175 AAA ATPase domain AMD13_RS20340 PF00665 Integrase core domain AMD13_RS20345 PF01527 Transposase AMD13_RS20350 PF05866 Endodeoxyribonuclease RusA AMD13_RS20360 PF13304 AAA domain AMD13_RS20370 PF13280 AMD13_RS20370 AMD13_RS20380 PF00899 ThiF family AMD13_RS20380 PF14457 AMD13_RS20380 AMD13_RS20380 PF14464 Prokaryotic homologs of the JAB domain AMD13_RS20385 PF01381 Helix-turn-helix AMD13_RS20390 PF01078 Magnesium chelatase, subunit ChlI AMD13_RS20390 PF13335 AMD13_RS20390 AMD13_RS20395 PF08212 Lipocalin-like domain AMD13_RS20405 PF00563 EAL domain AMD13_RS20405 PF12792 AMD13_RS20405 AMD13_RS20410 PF00487 AMD13_RS20410 AMD13_RS20415 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD13_RS20415 PF00175 Oxidoreductase NAD-binding domain AMD13_RS20415 PF00970 Oxidoreductase FAD-binding domain AMD13_RS20420 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS20435 PF01145 SPFH domain / Band 7 family AMD13_RS20440 PF01139 tRNA-splicing ligase RtcB AMD13_RS20450 PF00326 Prolyl oligopeptidase family AMD13_RS20455 PF11379 AMD13_RS20455 AMD13_RS20475 PF13628 AMD13_RS20475 AMD13_RS20480 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS20480 PF08338 Domain of unknown function (DUF1731) AMD13_RS20485 PF00072 Response regulator receiver domain AMD13_RS20485 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS20490 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS20490 PF00672 HAMP domain AMD13_RS20490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS20500 PF11769 AMD13_RS20500 AMD13_RS20510 PF13180 PDZ domain AMD13_RS20510 PF13365 Trypsin-like peptidase domain AMD13_RS20530 PF01594 AMD13_RS20530 AMD13_RS20535 PF13419 Haloacid dehalogenase-like hydrolase AMD13_RS20540 PF00883 Cytosol aminopeptidase family, catalytic domain AMD13_RS20550 PF04542 Sigma-70 region 2 AMD13_RS20550 PF08281 Sigma-70, region 4 AMD13_RS20555 PF00199 Catalase AMD13_RS20560 PF01292 Prokaryotic cytochrome b561 AMD13_RS20565 PF06283 Trehalose utilisation AMD13_RS20570 PF00072 Response regulator receiver domain AMD13_RS20570 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS20575 PF07730 Histidine kinase AMD13_RS20580 PF16576 AMD13_RS20580 AMD13_RS20585 PF00005 ABC transporter AMD13_RS20590 PF02687 AMD13_RS20590 AMD13_RS20590 PF12704 MacB-like periplasmic core domain AMD13_RS20595 PF02687 AMD13_RS20595 AMD13_RS20595 PF12704 MacB-like periplasmic core domain AMD13_RS20600 PF12697 Alpha/beta hydrolase family AMD13_RS20610 PF00892 EamA-like transporter family AMD13_RS20620 PF02225 PA domain AMD13_RS20620 PF04389 Peptidase family M28 AMD13_RS20625 PF00753 Metallo-beta-lactamase superfamily AMD13_RS20630 PF00579 tRNA synthetases class I (W and Y) AMD13_RS20630 PF07411 Domain of unknown function (DUF1508) AMD13_RS20635 PF05532 CsbD-like AMD13_RS20640 PF08085 AMD13_RS20640 AMD13_RS20645 PF08085 AMD13_RS20645 AMD13_RS20650 PF00491 Arginase family AMD13_RS20655 PF03259 Roadblock/LC7 domain AMD13_RS20675 PF02223 Thymidylate kinase AMD13_RS20685 PF05036 Sporulation related domain AMD13_RS20690 PF03309 Type III pantothenate kinase AMD13_RS20695 PF02237 Biotin protein ligase C terminal domain AMD13_RS20695 PF03099 Biotin/lipoate A/B protein ligase family AMD13_RS20695 PF08279 HTH domain AMD13_RS20705 PF06167 Glucose-regulated metallo-peptidase M90 AMD13_RS20710 PF07394 AMD13_RS20710 AMD13_RS20715 PF08811 AMD13_RS20715 AMD13_RS20720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS20725 PF00072 Response regulator receiver domain AMD13_RS20725 PF00486 Transcriptional regulatory protein, C terminal AMD13_RS20735 PF01207 Dihydrouridine synthase (Dus) AMD13_RS20745 PF12796 Ankyrin repeats (3 copies) AMD13_RS20755 PF13307 Helicase C-terminal domain AMD13_RS20770 PF01488 Shikimate / quinate 5-dehydrogenase AMD13_RS20770 PF08501 Shikimate dehydrogenase substrate binding domain AMD13_RS20775 PF07676 WD40-like Beta Propeller Repeat AMD13_RS20780 PF00175 Oxidoreductase NAD-binding domain AMD13_RS20780 PF00258 Flavodoxin AMD13_RS20780 PF03929 AMD13_RS20780 AMD13_RS20785 PF01223 DNA/RNA non-specific endonuclease AMD13_RS20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS20790 PF03466 LysR substrate binding domain AMD13_RS20795 PF01370 NAD dependent epimerase/dehydratase family AMD13_RS20800 PF00490 Delta-aminolevulinic acid dehydratase AMD13_RS20820 PF05960 Bacterial protein of unknown function (DUF885) AMD13_RS20825 PF00326 Prolyl oligopeptidase family AMD13_RS20825 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD13_RS20830 PF00043 Glutathione S-transferase, C-terminal domain AMD13_RS20830 PF02798 Glutathione S-transferase, N-terminal domain AMD13_RS20840 PF00593 TonB dependent receptor AMD13_RS20840 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS20845 PF07277 AMD13_RS20845 AMD13_RS20850 PF13621 Cupin-like domain AMD13_RS20855 PF04820 Tryptophan halogenase AMD13_RS20860 PF03544 Gram-negative bacterial TonB protein C-terminal AMD13_RS20865 PF12679 AMD13_RS20865 AMD13_RS20870 PF00005 ABC transporter AMD13_RS20875 PF00561 alpha/beta hydrolase fold AMD13_RS20875 PF08386 TAP-like protein AMD13_RS20880 PF01381 Helix-turn-helix AMD13_RS20890 PF01229 Glycosyl hydrolases family 39 AMD13_RS20895 PF02583 Metal-sensitive transcriptional repressor AMD13_RS20900 PF01545 Cation efflux family AMD13_RS20910 PF00593 TonB dependent receptor AMD13_RS20910 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS20915 PF11287 AMD13_RS20915 AMD13_RS20920 PF01965 DJ-1/PfpI family AMD13_RS20920 PF12833 Helix-turn-helix domain AMD13_RS20925 PF00175 Oxidoreductase NAD-binding domain AMD13_RS20925 PF00970 Oxidoreductase FAD-binding domain AMD13_RS20930 PF00005 ABC transporter AMD13_RS20935 PF01061 AMD13_RS20935 AMD13_RS20940 PF12686 AMD13_RS20940 AMD13_RS20945 PF02558 Ketopantoate reductase PanE/ApbA AMD13_RS20945 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD13_RS20955 PF03061 Thioesterase superfamily AMD13_RS20965 PF00085 Thioredoxin AMD13_RS20970 PF00258 Flavodoxin AMD13_RS20975 PF00268 Ribonucleotide reductase, small chain AMD13_RS20980 PF00317 Ribonucleotide reductase, all-alpha domain AMD13_RS20980 PF02867 Ribonucleotide reductase, barrel domain AMD13_RS20985 PF04332 AMD13_RS20985 AMD13_RS20990 PF13302 Acetyltransferase (GNAT) domain AMD13_RS20990 PF13380 CoA binding domain AMD13_RS20990 PF13549 ATP-grasp domain AMD13_RS20990 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD13_RS20995 PF00571 CBS domain AMD13_RS20995 PF01769 Divalent cation transporter AMD13_RS20995 PF03448 MgtE intracellular N domain AMD13_RS21000 PF00194 Eukaryotic-type carbonic anhydrase AMD13_RS21005 PF00999 Sodium/hydrogen exchanger family AMD13_RS21005 PF02254 TrkA-N domain AMD13_RS21010 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD13_RS21010 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD13_RS21015 PF00723 Glycosyl hydrolases family 15 AMD13_RS21025 PF00023 Ankyrin repeat AMD13_RS21025 PF12796 Ankyrin repeats (3 copies) AMD13_RS21030 PF05166 YcgL domain AMD13_RS21035 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD13_RS21035 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD13_RS21040 PF13723 AMD13_RS21040 AMD13_RS21045 PF00535 Glycosyl transferase family 2 AMD13_RS21050 PF04820 Tryptophan halogenase AMD13_RS21050 PF13450 NAD(P)-binding Rossmann-like domain AMD13_RS21060 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS21075 PF03176 MMPL family AMD13_RS21095 PF03279 AMD13_RS21095 AMD13_RS21100 PF07977 FabA-like domain AMD13_RS21105 PF01553 Acyltransferase AMD13_RS21115 PF00550 Phosphopantetheine attachment site AMD13_RS21120 PF04820 Tryptophan halogenase AMD13_RS21135 PF00501 AMP-binding enzyme AMD13_RS21140 PF00326 Prolyl oligopeptidase family AMD13_RS21140 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD13_RS21155 PF01218 Coproporphyrinogen III oxidase AMD13_RS21160 PF00476 DNA polymerase family A AMD13_RS21160 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD13_RS21160 PF01612 3'-5' exonuclease AMD13_RS21160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD13_RS21165 PF11191 Protein of unknown function (DUF2782) AMD13_RS21170 PF06812 AMD13_RS21170 AMD13_RS21175 PF05860 haemagglutination activity domain AMD13_RS21180 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD13_RS21180 PF08479 POTRA domain, ShlB-type AMD13_RS21190 PF00069 Protein kinase domain AMD13_RS21190 PF03781 Sulfatase-modifying factor enzyme 1 AMD13_RS21195 PF13672 Protein phosphatase 2C AMD13_RS21200 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) AMD13_RS21205 PF06744 AMD13_RS21205 AMD13_RS21205 PF06761 AMD13_RS21205 AMD13_RS21205 PF14331 AMD13_RS21205 AMD13_RS21210 PF00691 OmpA family AMD13_RS21210 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) AMD13_RS21215 PF05936 AMD13_RS21215 AMD13_RS21220 PF00498 FHA domain AMD13_RS21230 PF05954 Phage late control gene D protein (GPD) AMD13_RS21235 PF00515 Tetratricopeptide repeat AMD13_RS21235 PF13489 Methyltransferase domain AMD13_RS21240 PF05488 PAAR motif AMD13_RS21245 PF00069 Protein kinase domain AMD13_RS21245 PF13374 Tetratricopeptide repeat AMD13_RS21245 PF13424 Tetratricopeptide repeat AMD13_RS21250 PF07638 ECF sigma factor AMD13_RS21255 PF04542 Sigma-70 region 2 AMD13_RS21255 PF08281 Sigma-70, region 4 AMD13_RS21260 PF04773 FecR protein AMD13_RS21260 PF16220 AMD13_RS21260 AMD13_RS21260 PF16344 AMD13_RS21260 AMD13_RS21265 PF00593 TonB dependent receptor AMD13_RS21265 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS21270 PF00328 Histidine phosphatase superfamily (branch 2) AMD13_RS21275 PF01419 Jacalin-like lectin domain AMD13_RS21295 PF01609 Transposase DDE domain AMD13_RS21300 PF00004 ATPase family associated with various cellular activities (AAA) AMD13_RS21300 PF07724 AAA domain (Cdc48 subfamily) AMD13_RS21300 PF10431 C-terminal, D2-small domain, of ClpB protein AMD13_RS21305 PF06996 AMD13_RS21305 AMD13_RS21310 PF05947 AMD13_RS21310 AMD13_RS21315 PF04965 Gene 25-like lysozyme AMD13_RS21320 PF07024 ImpE protein AMD13_RS21325 PF05638 Protein of unknown function (DUF796) AMD13_RS21330 PF05943 AMD13_RS21330 AMD13_RS21335 PF05591 AMD13_RS21335 AMD13_RS21340 PF12833 Helix-turn-helix domain AMD13_RS21345 PF00582 Universal stress protein family AMD13_RS21350 PF00132 Bacterial transferase hexapeptide (six repeats) AMD13_RS21350 PF12464 Maltose acetyltransferase AMD13_RS21355 PF00580 UvrD/REP helicase N-terminal domain AMD13_RS21355 PF13361 UvrD-like helicase C-terminal domain AMD13_RS21360 PF13454 FAD-NAD(P)-binding AMD13_RS21370 PF13091 PLD-like domain AMD13_RS21370 PF13396 AMD13_RS21370 AMD13_RS21375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS21375 PF03466 LysR substrate binding domain AMD13_RS21380 PF03737 Demethylmenaquinone methyltransferase AMD13_RS21385 PF04303 PrpF protein AMD13_RS21390 PF04909 Amidohydrolase AMD13_RS21395 PF00471 Ribosomal protein L33 AMD13_RS21400 PF00830 Ribosomal L28 family AMD13_RS21405 PF00873 AcrB/AcrD/AcrF family AMD13_RS21410 PF16576 AMD13_RS21410 AMD13_RS21415 PF02321 Outer membrane efflux protein AMD13_RS21425 PF05960 Bacterial protein of unknown function (DUF885) AMD13_RS21430 PF02527 rRNA small subunit methyltransferase G AMD13_RS21435 PF09423 PhoD-like phosphatase AMD13_RS21435 PF16655 AMD13_RS21435 AMD13_RS21440 PF09423 PhoD-like phosphatase AMD13_RS21440 PF16655 AMD13_RS21440 AMD13_RS21445 PF01648 4'-phosphopantetheinyl transferase superfamily AMD13_RS21455 PF04226 AMD13_RS21455 AMD13_RS21460 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD13_RS21465 PF03372 Endonuclease/Exonuclease/phosphatase family AMD13_RS21470 PF00480 ROK family AMD13_RS21480 PF13616 PPIC-type PPIASE domain AMD13_RS21485 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD13_RS21490 PF00474 Sodium:solute symporter family AMD13_RS21495 PF04341 AMD13_RS21495 AMD13_RS21505 PF00501 AMP-binding enzyme AMD13_RS21505 PF13193 AMP-binding enzyme C-terminal domain AMD13_RS21505 PF16177 AMD13_RS21505 AMD13_RS21510 PF00072 Response regulator receiver domain AMD13_RS21510 PF00196 Bacterial regulatory proteins, luxR family AMD13_RS21515 PF14415 Domain of unknown function (DUF4424) AMD13_RS21525 PF00578 AhpC/TSA family AMD13_RS21535 PF04616 Glycosyl hydrolases family 43 AMD13_RS21545 PF00248 Aldo/keto reductase family AMD13_RS21550 PF04909 Amidohydrolase AMD13_RS21555 PF13561 Enoyl-(Acyl carrier protein) reductase AMD13_RS21560 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD13_RS21565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD13_RS21565 PF13378 Enolase C-terminal domain-like AMD13_RS21575 PF05336 Domain of unknown function (DUF718) AMD13_RS21580 PF07690 Major Facilitator Superfamily AMD13_RS21585 PF01614 Bacterial transcriptional regulator AMD13_RS21585 PF09339 IclR helix-turn-helix domain AMD13_RS21590 PF02659 AMD13_RS21590 AMD13_RS21595 PF00072 Response regulator receiver domain AMD13_RS21595 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS21595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS21595 PF12860 AMD13_RS21595 AMD13_RS21605 PF15979 AMD13_RS21605 AMD13_RS21610 PF06165 Glycosyltransferase family 36 AMD13_RS21610 PF17167 AMD13_RS21610 AMD13_RS21615 PF13347 MFS/sugar transport protein AMD13_RS21620 PF01202 Shikimate kinase AMD13_RS21625 PF13360 PQQ-like domain AMD13_RS21645 PF04357 AMD13_RS21645 AMD13_RS21650 PF01103 Surface antigen AMD13_RS21650 PF07244 Surface antigen variable number repeat AMD13_RS21665 PF01527 Transposase AMD13_RS21675 PF13333 AMD13_RS21675 AMD13_RS21680 PF00005 ABC transporter AMD13_RS21680 PF00664 ABC transporter transmembrane region AMD13_RS21685 PF02092 AMD13_RS21685 AMD13_RS21685 PF05746 DALR anticodon binding domain AMD13_RS21690 PF02091 Glycyl-tRNA synthetase alpha subunit AMD13_RS21695 PF00437 Type II/IV secretion system protein AMD13_RS21695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD13_RS21705 PF00117 Glutamine amidotransferase class-I AMD13_RS21715 PF00902 Sec-independent protein translocase protein (TatC) AMD13_RS21720 PF02416 mttA/Hcf106 family AMD13_RS21725 PF02416 mttA/Hcf106 family AMD13_RS21730 PF04366 AMD13_RS21730 AMD13_RS21735 PF00762 Ferrochelatase AMD13_RS21740 PF00561 alpha/beta hydrolase fold AMD13_RS21750 PF01863 Protein of unknown function DUF45 AMD13_RS21755 PF04381 Putative exonuclease, RdgC AMD13_RS21760 PF01171 PP-loop family AMD13_RS21770 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS21770 PF13377 Periplasmic binding protein-like domain AMD13_RS21775 PF03648 Glycosyl hydrolase family 67 N-terminus AMD13_RS21775 PF07477 Glycosyl hydrolase family 67 C-terminus AMD13_RS21775 PF07488 Glycosyl hydrolase family 67 middle domain AMD13_RS21780 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD13_RS21780 PF03629 Domain of unknown function (DUF303) AMD13_RS21785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD13_RS21785 PF13378 Enolase C-terminal domain-like AMD13_RS21790 PF04616 Glycosyl hydrolases family 43 AMD13_RS21795 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD13_RS21795 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD13_RS21795 PF07691 PA14 domain AMD13_RS21795 PF14310 Fibronectin type III-like domain AMD13_RS21800 PF01232 Mannitol dehydrogenase Rossmann domain AMD13_RS21800 PF08125 Mannitol dehydrogenase C-terminal domain AMD13_RS21815 PF01344 Kelch motif AMD13_RS21815 PF13964 Kelch motif AMD13_RS21820 PF00440 Bacterial regulatory proteins, tetR family AMD13_RS21825 PF00171 Aldehyde dehydrogenase family AMD13_RS21845 PF00596 Class II Aldolase and Adducin N-terminal domain AMD13_RS21850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD13_RS21850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD13_RS21855 PF09694 AMD13_RS21855 AMD13_RS21860 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AMD13_RS21875 PF08450 SMP-30/Gluconolaconase/LRE-like region AMD13_RS21880 PF00331 Glycosyl hydrolase family 10 AMD13_RS21885 PF00703 Glycosyl hydrolases family 2 AMD13_RS21885 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD13_RS21885 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD13_RS21885 PF16355 AMD13_RS21885 AMD13_RS21890 PF02614 Glucuronate isomerase AMD13_RS21895 PF00331 Glycosyl hydrolase family 10 AMD13_RS21910 PF00331 Glycosyl hydrolase family 10 AMD13_RS21915 PF07690 Major Facilitator Superfamily AMD13_RS21920 PF00593 TonB dependent receptor AMD13_RS21920 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS21925 PF13347 MFS/sugar transport protein AMD13_RS21930 PF04616 Glycosyl hydrolases family 43 AMD13_RS21935 PF08212 Lipocalin-like domain AMD13_RS21940 PF06877 Regulator of ribonuclease activity B AMD13_RS21960 PF04325 Protein of unknown function (DUF465) AMD13_RS21965 PF00107 Zinc-binding dehydrogenase AMD13_RS21965 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS21970 PF01553 Acyltransferase AMD13_RS21980 PF00356 Bacterial regulatory proteins, lacI family AMD13_RS21980 PF13377 Periplasmic binding protein-like domain AMD13_RS21985 PF13620 Carboxypeptidase regulatory-like domain AMD13_RS22000 PF04820 Tryptophan halogenase AMD13_RS22005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD13_RS22010 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD13_RS22015 PF04337 Protein of unknown function, DUF480 AMD13_RS22020 PF14094 AMD13_RS22020 AMD13_RS22025 PF13302 Acetyltransferase (GNAT) domain AMD13_RS22030 PF00580 UvrD/REP helicase N-terminal domain AMD13_RS22030 PF13361 UvrD-like helicase C-terminal domain AMD13_RS22035 PF00265 Thymidine kinase AMD13_RS22040 PF00512 His Kinase A (phospho-acceptor) domain AMD13_RS22040 PF01590 GAF domain AMD13_RS22040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD13_RS22045 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD13_RS22050 PF14315 AMD13_RS22050 AMD13_RS22055 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD13_RS22055 PF06827 Zinc finger found in FPG and IleRS AMD13_RS22055 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD13_RS22090 PF03594 AMD13_RS22090 AMD13_RS22095 PF00360 Phytochrome region AMD13_RS22095 PF01590 GAF domain AMD13_RS22095 PF08446 PAS fold AMD13_RS22095 PF08448 PAS fold AMD13_RS22100 PF01126 Heme oxygenase AMD13_RS22105 PF07690 Major Facilitator Superfamily AMD13_RS22110 PF01263 Aldose 1-epimerase AMD13_RS22110 PF01471 Putative peptidoglycan binding domain AMD13_RS22110 PF13406 Transglycosylase SLT domain AMD13_RS22125 PF01925 AMD13_RS22125 AMD13_RS22130 PF13555 P-loop containing region of AAA domain AMD13_RS22130 PF13558 Putative exonuclease SbcCD, C subunit AMD13_RS22135 PF13835 AMD13_RS22135 AMD13_RS22140 PF11855 AMD13_RS22140 AMD13_RS22145 PF01227 GTP cyclohydrolase I AMD13_RS22150 PF12802 MarR family AMD13_RS22155 PF07869 AMD13_RS22155 AMD13_RS22160 PF13437 HlyD family secretion protein AMD13_RS22160 PF13533 Biotin-lipoyl like AMD13_RS22165 PF02321 Outer membrane efflux protein AMD13_RS22170 PF04632 AMD13_RS22170 AMD13_RS22175 PF00083 Sugar (and other) transporter AMD13_RS22180 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD13_RS22185 PF13091 PLD-like domain AMD13_RS22200 PF05016 Plasmid stabilisation system protein AMD13_RS22205 PF03869 Arc-like DNA binding domain AMD13_RS22210 PF01850 PIN domain AMD13_RS22215 PF00756 Putative esterase AMD13_RS22220 PF09722 AMD13_RS22220 AMD13_RS22235 PF00849 RNA pseudouridylate synthase AMD13_RS22245 PF01527 Transposase AMD13_RS22255 PF13333 AMD13_RS22255 AMD13_RS22260 PF07080 Protein of unknown function (DUF1348) AMD13_RS22265 PF01609 Transposase DDE domain AMD13_RS22270 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AMD13_RS22270 PF00364 Biotin-requiring enzyme AMD13_RS22270 PF02626 Allophanate hydrolase subunit 2 AMD13_RS22270 PF02682 Allophanate hydrolase subunit 1 AMD13_RS22270 PF02785 Biotin carboxylase C-terminal domain AMD13_RS22270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD13_RS22275 PF01425 Amidase AMD13_RS22280 PF01609 Transposase DDE domain AMD13_RS22285 PF07080 Protein of unknown function (DUF1348) AMD13_RS22295 PF05299 M61 glycyl aminopeptidase AMD13_RS22300 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD13_RS22305 PF13538 UvrD-like helicase C-terminal domain AMD13_RS22305 PF13604 AAA domain AMD13_RS22310 PF00580 UvrD/REP helicase N-terminal domain AMD13_RS22310 PF12705 PD-(D/E)XK nuclease superfamily AMD13_RS22310 PF13361 UvrD-like helicase C-terminal domain AMD13_RS22315 PF04257 Exodeoxyribonuclease V, gamma subunit AMD13_RS22330 PF00005 ABC transporter AMD13_RS22335 PF02405 AMD13_RS22335 AMD13_RS22340 PF02470 AMD13_RS22340 AMD13_RS22345 PF05494 Toluene tolerance, Ttg2 AMD13_RS22350 PF13466 STAS domain AMD13_RS22355 PF04333 AMD13_RS22355 AMD13_RS22360 PF14534 Domain of unknown function (DUF4440) AMD13_RS22365 PF00255 Glutathione peroxidase AMD13_RS22375 PF02646 AMD13_RS22375 AMD13_RS22380 PF08240 Alcohol dehydrogenase GroES-like domain AMD13_RS22380 PF13602 Zinc-binding dehydrogenase AMD13_RS22385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD13_RS22385 PF03466 LysR substrate binding domain AMD13_RS22395 PF13410 Glutathione S-transferase, C-terminal domain AMD13_RS22395 PF13417 Glutathione S-transferase, N-terminal domain AMD13_RS22405 PF13520 Amino acid permease AMD13_RS22410 PF07971 Glycosyl hydrolase family 92 AMD13_RS22415 PF10947 AMD13_RS22415 AMD13_RS22420 PF00990 GGDEF domain AMD13_RS22420 PF08448 PAS fold AMD13_RS22425 PF05651 AMD13_RS22425 AMD13_RS22425 PF13556 PucR C-terminal helix-turn-helix domain AMD13_RS22430 PF02595 Glycerate kinase family AMD13_RS22435 PF07690 Major Facilitator Superfamily AMD13_RS22440 PF01244 Membrane dipeptidase (Peptidase family M19) AMD13_RS22450 PF10672 S-adenosylmethionine-dependent methyltransferase AMD13_RS22455 PF03741 AMD13_RS22455 AMD13_RS22460 PF01694 Rhomboid family AMD13_RS22465 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD13_RS22470 PF00593 TonB dependent receptor AMD13_RS22470 PF07715 TonB-dependent Receptor Plug Domain AMD13_RS22475 PF01569 PAP2 superfamily AMD13_RS22480 PF01926 50S ribosome-binding GTPase AMD13_RS22480 PF10396 GTP-binding protein TrmE N-terminus AMD13_RS22480 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AMD13_RS22485 PF00656 Caspase domain AMD13_RS22485 PF01522 Polysaccharide deacetylase AMD13_RS22485 PF13424 Tetratricopeptide repeat AMD13_RS22495 PF02096 60Kd inner membrane protein AMD13_RS22495 PF14849 YidC periplasmic domain AMD13_RS22500 PF00825 Ribonuclease P AMD13_RS22505 PF00468 Ribosomal protein L34