AMD13_RS00010 SM00382 ATPases associated with a variety of cellular activities AMD13_RS00045 SM00433 TopoisomeraseII AMD13_RS00200 SM00028 Tetratricopeptide repeats AMD13_RS00485 SM00382 ATPases associated with a variety of cellular activities AMD13_RS00485 SM00760 Bacterial dnaA protein helix-turn-helix domain AMD13_RS00490 SM00480 DNA polymerase III beta subunit AMD13_RS00500 SM00387 Histidine kinase-like ATPases AMD13_RS00500 SM00433 TopoisomeraseII AMD13_RS00515 SM00028 Tetratricopeptide repeats AMD13_RS00550 SM00155 Phospholipase D. Active site motifs. AMD13_RS00565 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS00595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD13_RS00595 SM00245 tail specific protease AMD13_RS00635 SM00829 Enoylreductase AMD13_RS00760 SM00382 ATPases associated with a variety of cellular activities AMD13_RS00870 SM00487 DEAD-like helicases superfamily AMD13_RS00870 SM00490 helicase superfamily c-terminal domain AMD13_RS00890 SM00822 AMD13_RS00890 AMD13_RS00895 SM00822 AMD13_RS00895 AMD13_RS01150 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMD13_RS01175 SM00421 helix_turn_helix, Lux Regulon AMD13_RS01175 SM00448 cheY-homologous receiver domain AMD13_RS01195 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS01275 SM00642 Alpha-amylase domain AMD13_RS01280 SM00642 Alpha-amylase domain AMD13_RS01285 SM00642 Alpha-amylase domain AMD13_RS01335 SM00354 helix_turn _helix lactose operon repressor AMD13_RS01375 SM00344 helix_turn_helix ASNC type AMD13_RS01395 SM00382 ATPases associated with a variety of cellular activities AMD13_RS01410 SM00382 ATPases associated with a variety of cellular activities AMD13_RS01445 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS01475 SM00855 Phosphoglycerate mutase family AMD13_RS01480 SM00867 YceI-like domain AMD13_RS01485 SM00155 Phospholipase D. Active site motifs. AMD13_RS01495 SM00563 Phosphate acyltransferases AMD13_RS01510 SM00028 Tetratricopeptide repeats AMD13_RS01520 SM00829 Enoylreductase AMD13_RS01535 SM01230 AMD13_RS01535 AMD13_RS01540 SM00938 Nitrogen regulatory protein P-II AMD13_RS01550 SM00387 Histidine kinase-like ATPases AMD13_RS01550 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS01555 SM00382 ATPases associated with a variety of cellular activities AMD13_RS01555 SM00448 cheY-homologous receiver domain AMD13_RS01615 SM00450 Rhodanese Homology Domain AMD13_RS01640 SM00387 Histidine kinase-like ATPases AMD13_RS01640 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS01645 SM00382 ATPases associated with a variety of cellular activities AMD13_RS01645 SM00448 cheY-homologous receiver domain AMD13_RS01755 SM00563 Phosphate acyltransferases AMD13_RS01790 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS01815 SM00100 Cyclic nucleotide-monophosphate binding domain AMD13_RS01815 SM00267 diguanylate cyclase AMD13_RS01840 SM00878 Biotin carboxylase C-terminal domain AMD13_RS01865 SM00953 AMD13_RS01865 AMD13_RS01905 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMD13_RS01935 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS01970 SM00829 Enoylreductase AMD13_RS02000 SM00487 DEAD-like helicases superfamily AMD13_RS02000 SM00490 helicase superfamily c-terminal domain AMD13_RS02000 SM00847 Helicase associated domain (HA2) Add an annotation AMD13_RS02135 SM00422 helix_turn_helix, mercury resistance AMD13_RS02170 SM00448 cheY-homologous receiver domain AMD13_RS02170 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS02175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS02175 SM00387 Histidine kinase-like ATPases AMD13_RS02175 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS02320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD13_RS02325 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS02345 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS02375 SM00420 helix_turn_helix, Deoxyribose operon repressor AMD13_RS02375 SM01134 AMD13_RS02375 AMD13_RS02390 SM00882 Coenzyme A transferase AMD13_RS02395 SM00882 Coenzyme A transferase AMD13_RS02415 SM00998 Adenylosuccinate lyase C-terminus AMD13_RS02435 SM00346 helix_turn_helix isocitrate lyase regulation AMD13_RS02440 SM00090 RIO-like kinase AMD13_RS02455 SM01228 AMD13_RS02455 AMD13_RS02510 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS02510 SM00876 Biotin and Thiamin Synthesis associated domain AMD13_RS02530 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMD13_RS02625 SM00382 ATPases associated with a variety of cellular activities AMD13_RS02685 SM00267 diguanylate cyclase AMD13_RS02695 SM00642 Alpha-amylase domain AMD13_RS02700 SM00642 Alpha-amylase domain AMD13_RS02710 SM00642 Alpha-amylase domain AMD13_RS02720 SM00642 Alpha-amylase domain AMD13_RS02770 SM00822 AMD13_RS02770 AMD13_RS02780 SM00487 DEAD-like helicases superfamily AMD13_RS02780 SM00490 helicase superfamily c-terminal domain AMD13_RS02790 SM00326 Src homology 3 domains AMD13_RS02795 SM00861 Transketolase, pyrimidine binding domain AMD13_RS02805 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMD13_RS02825 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS02925 SM00271 DnaJ molecular chaperone homology domain AMD13_RS02945 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMD13_RS02965 SM00903 Flavin reductase like domain AMD13_RS02985 SM00100 Cyclic nucleotide-monophosphate binding domain AMD13_RS02985 SM00419 helix_turn_helix, cAMP Regulatory protein AMD13_RS03040 SM00387 Histidine kinase-like ATPases AMD13_RS03040 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS03040 SM00448 cheY-homologous receiver domain AMD13_RS03045 SM00052 Putative diguanylate phosphodiesterase AMD13_RS03045 SM00267 diguanylate cyclase AMD13_RS03045 SM00448 cheY-homologous receiver domain AMD13_RS03110 SM00563 Phosphate acyltransferases AMD13_RS03135 SM01209 AMD13_RS03135 AMD13_RS03135 SM01210 AMD13_RS03135 AMD13_RS03145 SM00798 AICARFT/IMPCHase bienzyme AMD13_RS03145 SM00851 MGS-like domain AMD13_RS03160 SM00195 Dual specificity phosphatase, catalytic domain AMD13_RS03180 SM00563 Phosphate acyltransferases AMD13_RS03205 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS03230 SM00878 Biotin carboxylase C-terminal domain AMD13_RS03260 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS03270 SM00234 in StAR and phosphatidylcholine transfer protein AMD13_RS03290 SM00883 Chaperonin 10 Kd subunit AMD13_RS03350 SM00944 Pro-kumamolisin, activation domain AMD13_RS03365 SM00867 YceI-like domain AMD13_RS03420 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD13_RS03430 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD13_RS03430 SM00895 AMD13_RS03430 AMD13_RS03450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS03450 SM00331 Sigma factor PP2C-like phosphatases AMD13_RS03490 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS03555 SM00267 diguanylate cyclase AMD13_RS03585 SM00062 Bacterial periplasmic substrate-binding proteins AMD13_RS03625 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD13_RS03625 SM01232 AMD13_RS03625 AMD13_RS03640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS03650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS03650 SM00091 PAS domain AMD13_RS03650 SM00267 diguanylate cyclase AMD13_RS03655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS03655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS03655 SM01049 AMD13_RS03655 AMD13_RS03660 SM00637 AMD13_RS03660 AMD13_RS03670 SM00267 diguanylate cyclase AMD13_RS03700 SM00448 cheY-homologous receiver domain AMD13_RS03700 SM00850 LytTr DNA-binding domain AMD13_RS03780 SM00382 ATPases associated with a variety of cellular activities AMD13_RS03780 SM01086 C-terminal, D2-small domain, of ClpB protein AMD13_RS03810 SM00267 diguanylate cyclase AMD13_RS03815 SM01263 AMD13_RS03815 AMD13_RS03835 SM00564 beta-propeller repeat AMD13_RS03840 SM00062 Bacterial periplasmic substrate-binding proteins AMD13_RS03840 SM00248 ankyrin repeats AMD13_RS03855 SM00829 Enoylreductase AMD13_RS03865 SM00382 ATPases associated with a variety of cellular activities AMD13_RS03875 SM00268 Actin AMD13_RS03900 SM00710 Parallel beta-helix repeats AMD13_RS03920 SM00936 Penicillin-binding protein 5, C-terminal domain AMD13_RS03940 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS03945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD13_RS03945 SM00245 tail specific protease AMD13_RS04000 SM01350 AMD13_RS04000 AMD13_RS04010 SM00749 bacterial OsmY and nodulation domain AMD13_RS04015 SM00387 Histidine kinase-like ATPases AMD13_RS04015 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS04020 SM00448 cheY-homologous receiver domain AMD13_RS04025 SM00387 Histidine kinase-like ATPases AMD13_RS04025 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS04025 SM00448 cheY-homologous receiver domain AMD13_RS04055 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD13_RS04080 SM00382 ATPases associated with a variety of cellular activities AMD13_RS04150 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD13_RS04150 SM00866 AMD13_RS04150 AMD13_RS04160 SM00354 helix_turn _helix lactose operon repressor AMD13_RS04225 SM00849 Metallo-beta-lactamase superfamily AMD13_RS04230 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS04240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS04240 SM00387 Histidine kinase-like ATPases AMD13_RS04240 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS04245 SM00448 cheY-homologous receiver domain AMD13_RS04245 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS04265 SM00829 Enoylreductase AMD13_RS04285 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD13_RS04305 SM00382 ATPases associated with a variety of cellular activities AMD13_RS04365 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD13_RS04395 SM00387 Histidine kinase-like ATPases AMD13_RS04395 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS04400 SM00448 cheY-homologous receiver domain AMD13_RS04400 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS04510 SM00842 Cell division protein FtsA AMD13_RS04515 SM00864 Tubulin/FtsZ family, GTPase domain AMD13_RS04515 SM00865 Tubulin/FtsZ family, C-terminal domain AMD13_RS04535 SM00957 SecA DEAD-like domain AMD13_RS04535 SM00958 SecA preprotein cross-linking domain AMD13_RS04560 SM00829 Enoylreductase AMD13_RS04565 SM00944 Pro-kumamolisin, activation domain AMD13_RS04580 SM00642 Alpha-amylase domain AMD13_RS04615 SM00996 S-adenosyl-L-homocysteine hydrolase AMD13_RS04615 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD13_RS04730 SM00382 ATPases associated with a variety of cellular activities AMD13_RS04750 SM00382 ATPases associated with a variety of cellular activities AMD13_RS04760 SM00448 cheY-homologous receiver domain AMD13_RS04760 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS04765 SM00387 Histidine kinase-like ATPases AMD13_RS04765 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS04815 SM00382 ATPases associated with a variety of cellular activities AMD13_RS04825 SM00382 ATPases associated with a variety of cellular activities AMD13_RS04885 SM00382 ATPases associated with a variety of cellular activities AMD13_RS04900 SM00650 Ribosomal RNA adenine dimethylases AMD13_RS04965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD13_RS04965 SM00895 AMD13_RS04965 AMD13_RS05000 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS05075 SM00448 cheY-homologous receiver domain AMD13_RS05080 SM00387 Histidine kinase-like ATPases AMD13_RS05080 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS05080 SM00448 cheY-homologous receiver domain AMD13_RS05085 SM00421 helix_turn_helix, Lux Regulon AMD13_RS05150 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD13_RS05150 SM00475 5'-3' exonuclease AMD13_RS05180 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMD13_RS05180 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMD13_RS05295 SM00852 Probable molybdopterin binding domain AMD13_RS05300 SM00028 Tetratricopeptide repeats AMD13_RS05305 SM00937 AMD13_RS05305 AMD13_RS05315 SM00028 Tetratricopeptide repeats AMD13_RS05335 SM01400 AMD13_RS05335 AMD13_RS05385 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMD13_RS05385 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD13_RS05390 SM00649 Ribosomal protein L11/L12 AMD13_RS05415 SM00663 RNA polymerase I subunit A N-terminus AMD13_RS05430 SM00838 Elongation factor G C-terminus AMD13_RS05430 SM00889 Elongation factor G, domain IV AMD13_RS05440 SM01403 AMD13_RS05440 AMD13_RS05460 SM01382 AMD13_RS05460 AMD13_RS05460 SM01383 AMD13_RS05460 AMD13_RS05475 SM00322 K homology RNA-binding domain AMD13_RS05495 SM01374 AMD13_RS05495 AMD13_RS05500 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD13_RS05560 SM00363 S4 RNA-binding domain AMD13_RS05560 SM01390 AMD13_RS05560 AMD13_RS05565 SM00662 RNA polymerases D AMD13_RS05610 SM00838 Elongation factor G C-terminus AMD13_RS05640 SM00829 Enoylreductase AMD13_RS05685 SM00382 ATPases associated with a variety of cellular activities AMD13_RS05695 SM00829 Enoylreductase AMD13_RS05725 SM00855 Phosphoglycerate mutase family AMD13_RS05775 SM00014 Acid phosphatase homologues AMD13_RS05795 SM00091 PAS domain AMD13_RS05795 SM00387 Histidine kinase-like ATPases AMD13_RS05795 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS05800 SM00448 cheY-homologous receiver domain AMD13_RS05800 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS05820 SM01329 AMD13_RS05820 AMD13_RS05965 SM00387 Histidine kinase-like ATPases AMD13_RS05985 SM00382 ATPases associated with a variety of cellular activities AMD13_RS05985 SM00994 ClpX C4-type zinc finger AMD13_RS05985 SM01086 C-terminal, D2-small domain, of ClpB protein AMD13_RS05990 SM00382 ATPases associated with a variety of cellular activities AMD13_RS05990 SM00464 Found in ATP-dependent protease La (LON) AMD13_RS05995 SM00411 bacterial (prokaryotic) histone like domain AMD13_RS06020 SM00257 Lysin motif AMD13_RS06025 SM00849 Metallo-beta-lactamase superfamily AMD13_RS06040 SM00479 AMD13_RS06040 AMD13_RS06045 SM00331 Sigma factor PP2C-like phosphatases AMD13_RS06045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD13_RS06070 SM00849 Metallo-beta-lactamase superfamily AMD13_RS06075 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS06145 SM00382 ATPases associated with a variety of cellular activities AMD13_RS06155 SM00493 AMD13_RS06155 AMD13_RS06170 SM00460 Transglutaminase/protease-like homologues AMD13_RS06180 SM00382 ATPases associated with a variety of cellular activities AMD13_RS06225 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD13_RS06230 SM00822 AMD13_RS06230 AMD13_RS06240 SM00825 Beta-ketoacyl synthase AMD13_RS06275 SM00382 ATPases associated with a variety of cellular activities AMD13_RS06315 SM01359 AMD13_RS06315 AMD13_RS06315 SM01360 AMD13_RS06315 AMD13_RS06350 SM00271 DnaJ molecular chaperone homology domain AMD13_RS06355 SM00448 cheY-homologous receiver domain AMD13_RS06360 SM00244 prohibitin homologues AMD13_RS06365 SM00244 prohibitin homologues AMD13_RS06370 SM01321 AMD13_RS06370 AMD13_RS06375 SM00788 Adenylosuccinate synthetase AMD13_RS06390 SM00822 AMD13_RS06390 AMD13_RS06445 SM00220 Serine/Threonine protein kinases, catalytic domain AMD13_RS06460 SM00855 Phosphoglycerate mutase family AMD13_RS06515 SM00052 Putative diguanylate phosphodiesterase AMD13_RS06520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD13_RS06530 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD13_RS06535 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD13_RS06550 SM00974 AMD13_RS06550 AMD13_RS06570 SM00966 SpoVT / AbrB like domain AMD13_RS06590 SM00481 DNA polymerase alpha chain like domain AMD13_RS06600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD13_RS06635 SM00091 PAS domain AMD13_RS06635 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS06650 SM01060 AMD13_RS06650 AMD13_RS06700 SM00448 cheY-homologous receiver domain AMD13_RS06700 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS06705 SM00387 Histidine kinase-like ATPases AMD13_RS06705 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS06745 SM00421 helix_turn_helix, Lux Regulon AMD13_RS06745 SM00448 cheY-homologous receiver domain AMD13_RS06760 SM00478 endonuclease III AMD13_RS06780 SM00244 prohibitin homologues AMD13_RS06865 SM00904 Riboflavin kinase AMD13_RS06910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD13_RS06915 SM00382 ATPases associated with a variety of cellular activities AMD13_RS06925 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS06930 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS06965 SM00387 Histidine kinase-like ATPases AMD13_RS06965 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS06970 SM00387 Histidine kinase-like ATPases AMD13_RS06970 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS06970 SM00448 cheY-homologous receiver domain AMD13_RS06995 SM00387 Histidine kinase-like ATPases AMD13_RS06995 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS06995 SM00448 cheY-homologous receiver domain AMD13_RS07005 SM00138 Methyltransferase, chemotaxis proteins AMD13_RS07010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS07010 SM00387 Histidine kinase-like ATPases AMD13_RS07010 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS07010 SM00448 cheY-homologous receiver domain AMD13_RS07015 SM00091 PAS domain AMD13_RS07015 SM00387 Histidine kinase-like ATPases AMD13_RS07015 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS07020 SM00448 cheY-homologous receiver domain AMD13_RS07030 SM00813 Alpha-L-arabinofuranosidase C-terminus AMD13_RS07050 SM00382 ATPases associated with a variety of cellular activities AMD13_RS07050 SM00962 SRP54-type protein, GTPase domain AMD13_RS07050 SM00963 SRP54-type protein, helical bundle domain AMD13_RS07120 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMD13_RS07120 SM00534 ATPase domain of DNA mismatch repair MUTS family AMD13_RS07140 SM00812 Alpha-L-fucosidase AMD13_RS07165 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS07215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD13_RS07220 SM00838 Elongation factor G C-terminus AMD13_RS07235 SM00358 Double-stranded RNA binding motif AMD13_RS07235 SM00535 Ribonuclease III family AMD13_RS07250 SM00448 cheY-homologous receiver domain AMD13_RS07260 SM01118 AMD13_RS07260 AMD13_RS07295 SM00357 Cold shock protein domain AMD13_RS07310 SM00487 DEAD-like helicases superfamily AMD13_RS07310 SM00490 helicase superfamily c-terminal domain AMD13_RS07340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS07340 SM00267 diguanylate cyclase AMD13_RS07360 SM00869 Autotransporter beta-domain AMD13_RS07365 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD13_RS07370 SM00671 Sel1-like repeats. AMD13_RS07370 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD13_RS07570 SM00382 ATPases associated with a variety of cellular activities AMD13_RS07655 SM00481 DNA polymerase alpha chain like domain AMD13_RS07695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD13_RS07725 SM00267 diguanylate cyclase AMD13_RS07750 SM00972 Spore Coat Protein U domain AMD13_RS07765 SM00972 Spore Coat Protein U domain AMD13_RS07775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD13_RS07795 SM01172 AMD13_RS07795 AMD13_RS07800 SM00710 Parallel beta-helix repeats AMD13_RS07800 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AMD13_RS07835 SM00434 DNA Topoisomerase IV AMD13_RS07840 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS07845 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS07870 SM01217 AMD13_RS07870 AMD13_RS07875 SM00631 AMD13_RS07875 AMD13_RS07905 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS07925 SM00382 ATPases associated with a variety of cellular activities AMD13_RS07940 SM00947 Carbonic anhydrase AMD13_RS07955 SM00357 Cold shock protein domain AMD13_RS08070 SM00267 diguanylate cyclase AMD13_RS08080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS08080 SM00267 diguanylate cyclase AMD13_RS08095 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS08110 SM00528 Domain in histone-like proteins of HNS family AMD13_RS08135 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS08230 SM00271 DnaJ molecular chaperone homology domain AMD13_RS08270 SM00382 ATPases associated with a variety of cellular activities AMD13_RS08295 SM00861 Transketolase, pyrimidine binding domain AMD13_RS08305 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD13_RS08325 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS08325 SM01091 Transporter associated domain AMD13_RS08355 SM00382 ATPases associated with a variety of cellular activities AMD13_RS08360 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD13_RS08375 SM00984 UDP binding domain AMD13_RS08395 SM00354 helix_turn _helix lactose operon repressor AMD13_RS08415 SM01018 B12 binding domain AMD13_RS08425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMD13_RS08445 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS08445 SM00357 Cold shock protein domain AMD13_RS08445 SM00955 AMD13_RS08445 AMD13_RS08455 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD13_RS08460 SM00267 diguanylate cyclase AMD13_RS08465 SM00479 AMD13_RS08465 AMD13_RS08480 SM00382 ATPases associated with a variety of cellular activities AMD13_RS08515 SM00947 Carbonic anhydrase AMD13_RS08525 SM00478 endonuclease III AMD13_RS08550 SM00450 Rhodanese Homology Domain AMD13_RS08560 SM00644 AMD13_RS08560 AMD13_RS08580 SM00382 ATPases associated with a variety of cellular activities AMD13_RS08585 SM00981 AMD13_RS08585 AMD13_RS08615 SM00479 AMD13_RS08615 AMD13_RS08640 SM00947 Carbonic anhydrase AMD13_RS08685 SM00421 helix_turn_helix, Lux Regulon AMD13_RS08685 SM00448 cheY-homologous receiver domain AMD13_RS08745 SM00968 SMC proteins Flexible Hinge Domain AMD13_RS08750 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMD13_RS08765 SM00292 breast cancer carboxy-terminal domain AMD13_RS08765 SM00532 Ligase N family AMD13_RS08785 SM00434 DNA Topoisomerase IV AMD13_RS08830 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD13_RS08830 SM00866 AMD13_RS08830 AMD13_RS08855 SM00240 Forkhead associated domain AMD13_RS08875 SM00830 Chorismate mutase type II AMD13_RS08960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS08960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS08970 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS08985 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS08985 SM00091 PAS domain AMD13_RS08985 SM00387 Histidine kinase-like ATPases AMD13_RS08985 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS08985 SM00448 cheY-homologous receiver domain AMD13_RS08990 SM00448 cheY-homologous receiver domain AMD13_RS08995 SM00382 ATPases associated with a variety of cellular activities AMD13_RS09000 SM00091 PAS domain AMD13_RS09000 SM00387 Histidine kinase-like ATPases AMD13_RS09000 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS09000 SM00448 cheY-homologous receiver domain AMD13_RS09155 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS09165 SM00382 ATPases associated with a variety of cellular activities AMD13_RS09190 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS09190 SM01091 Transporter associated domain AMD13_RS09215 SM00387 Histidine kinase-like ATPases AMD13_RS09215 SM00433 TopoisomeraseII AMD13_RS09240 SM01192 AMD13_RS09240 AMD13_RS09240 SM01193 AMD13_RS09240 AMD13_RS09265 SM00463 Small MutS-related domain AMD13_RS09285 SM00257 Lysin motif AMD13_RS09295 SM01103 AMD13_RS09295 AMD13_RS09305 SM00382 ATPases associated with a variety of cellular activities AMD13_RS09345 SM00382 ATPases associated with a variety of cellular activities AMD13_RS09355 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD13_RS09370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS09370 SM00091 PAS domain AMD13_RS09370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS09425 SM00670 Large family of predicted nucleotide-binding domains AMD13_RS09445 SM01130 AMD13_RS09445 AMD13_RS09470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD13_RS09515 SM00758 AMD13_RS09515 AMD13_RS09545 SM00646 AMD13_RS09545 AMD13_RS09615 SM00052 Putative diguanylate phosphodiesterase AMD13_RS09615 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS09615 SM00267 diguanylate cyclase AMD13_RS09625 SM00448 cheY-homologous receiver domain AMD13_RS09630 SM00387 Histidine kinase-like ATPases AMD13_RS09640 SM00014 Acid phosphatase homologues AMD13_RS09715 SM00912 haemagglutination activity domain AMD13_RS09760 SM00100 Cyclic nucleotide-monophosphate binding domain AMD13_RS09760 SM00419 helix_turn_helix, cAMP Regulatory protein AMD13_RS09835 SM01007 Class II Aldolase and Adducin N-terminal domain AMD13_RS09880 SM00841 Elongation factor P, C-terminal AMD13_RS09880 SM01185 AMD13_RS09880 AMD13_RS09885 SM00822 AMD13_RS09885 AMD13_RS09905 SM00899 AMD13_RS09905 AMD13_RS09940 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMD13_RS09950 SM00851 MGS-like domain AMD13_RS09950 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD13_RS10010 SM00850 LytTr DNA-binding domain AMD13_RS10015 SM00937 AMD13_RS10015 AMD13_RS10025 SM00448 cheY-homologous receiver domain AMD13_RS10025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD13_RS10030 SM00073 Histidine Phosphotransfer domain AMD13_RS10030 SM00387 Histidine kinase-like ATPases AMD13_RS10030 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS10030 SM00448 cheY-homologous receiver domain AMD13_RS10055 SM00966 SpoVT / AbrB like domain AMD13_RS10075 SM00052 Putative diguanylate phosphodiesterase AMD13_RS10075 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS10075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS10075 SM00091 PAS domain AMD13_RS10075 SM00267 diguanylate cyclase AMD13_RS10080 SM00448 cheY-homologous receiver domain AMD13_RS10090 SM00138 Methyltransferase, chemotaxis proteins AMD13_RS10095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10150 SM01049 AMD13_RS10150 AMD13_RS10160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS10165 SM00073 Histidine Phosphotransfer domain AMD13_RS10165 SM00260 Two component signalling adaptor domain AMD13_RS10165 SM00387 Histidine kinase-like ATPases AMD13_RS10165 SM01231 AMD13_RS10165 AMD13_RS10170 SM00448 cheY-homologous receiver domain AMD13_RS10180 SM00260 Two component signalling adaptor domain AMD13_RS10210 SM00220 Serine/Threonine protein kinases, catalytic domain AMD13_RS10270 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS10295 SM00073 Histidine Phosphotransfer domain AMD13_RS10295 SM00260 Two component signalling adaptor domain AMD13_RS10295 SM00387 Histidine kinase-like ATPases AMD13_RS10295 SM01231 AMD13_RS10295 AMD13_RS10305 SM00448 cheY-homologous receiver domain AMD13_RS10320 SM00382 ATPases associated with a variety of cellular activities AMD13_RS10320 SM00962 SRP54-type protein, GTPase domain AMD13_RS10335 SM00052 Putative diguanylate phosphodiesterase AMD13_RS10335 SM00267 diguanylate cyclase AMD13_RS10340 SM00267 diguanylate cyclase AMD13_RS10350 SM00267 diguanylate cyclase AMD13_RS10400 SM00382 ATPases associated with a variety of cellular activities AMD13_RS10450 SM00822 AMD13_RS10450 AMD13_RS10475 SM00382 ATPases associated with a variety of cellular activities AMD13_RS10480 SM00448 cheY-homologous receiver domain AMD13_RS10490 SM00421 helix_turn_helix, Lux Regulon AMD13_RS10490 SM00448 cheY-homologous receiver domain AMD13_RS10530 SM00047 Lysozyme subfamily 2 AMD13_RS10575 SM00260 Two component signalling adaptor domain AMD13_RS10575 SM00448 cheY-homologous receiver domain AMD13_RS10580 SM00858 AMD13_RS10580 AMD13_RS10595 SM00387 Histidine kinase-like ATPases AMD13_RS10600 SM00052 Putative diguanylate phosphodiesterase AMD13_RS10600 SM00267 diguanylate cyclase AMD13_RS10600 SM00448 cheY-homologous receiver domain AMD13_RS10605 SM00091 PAS domain AMD13_RS10605 SM00387 Histidine kinase-like ATPases AMD13_RS10610 SM00052 Putative diguanylate phosphodiesterase AMD13_RS10610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS10610 SM00091 PAS domain AMD13_RS10610 SM00267 diguanylate cyclase AMD13_RS10620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS10645 SM00382 ATPases associated with a variety of cellular activities AMD13_RS10645 SM01086 C-terminal, D2-small domain, of ClpB protein AMD13_RS10650 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS10670 SM00382 ATPases associated with a variety of cellular activities AMD13_RS10670 SM00843 AMD13_RS10670 AMD13_RS10690 SM00382 ATPases associated with a variety of cellular activities AMD13_RS10720 SM00562 AMD13_RS10720 AMD13_RS10730 SM00028 Tetratricopeptide repeats AMD13_RS10745 SM00564 beta-propeller repeat AMD13_RS10750 SM00382 ATPases associated with a variety of cellular activities AMD13_RS10755 SM00852 Probable molybdopterin binding domain AMD13_RS10760 SM00450 Rhodanese Homology Domain AMD13_RS10805 SM00852 Probable molybdopterin binding domain AMD13_RS10830 SM00529 Helix-turn-helix diphteria tox regulatory element AMD13_RS10840 SM00479 AMD13_RS10840 AMD13_RS10910 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS10910 SM00732 Likely ribonuclease with RNase H fold. AMD13_RS10915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS10915 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS10915 SM00091 PAS domain AMD13_RS10915 SM00387 Histidine kinase-like ATPases AMD13_RS10915 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS10915 SM00448 cheY-homologous receiver domain AMD13_RS10920 SM00448 cheY-homologous receiver domain AMD13_RS11005 SM00382 ATPases associated with a variety of cellular activities AMD13_RS11055 SM00382 ATPases associated with a variety of cellular activities AMD13_RS11065 SM00849 Metallo-beta-lactamase superfamily AMD13_RS11080 SM00382 ATPases associated with a variety of cellular activities AMD13_RS11095 SM00226 Low molecular weight phosphatase family AMD13_RS11105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD13_RS11105 SM00465 GIY-YIG type nucleases (URI domain) AMD13_RS11135 SM00823 Phosphopantetheine attachment site AMD13_RS11165 SM00984 UDP binding domain AMD13_RS11185 SM00450 Rhodanese Homology Domain AMD13_RS11190 SM00421 helix_turn_helix, Lux Regulon AMD13_RS11190 SM00448 cheY-homologous receiver domain AMD13_RS11195 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS11200 SM00363 S4 RNA-binding domain AMD13_RS11240 SM01034 Sensors of blue-light using FAD AMD13_RS11350 SM00448 cheY-homologous receiver domain AMD13_RS11350 SM00850 LytTr DNA-binding domain AMD13_RS11370 SM00869 Autotransporter beta-domain AMD13_RS11390 SM00387 Histidine kinase-like ATPases AMD13_RS11390 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS11395 SM00421 helix_turn_helix, Lux Regulon AMD13_RS11395 SM00448 cheY-homologous receiver domain AMD13_RS11400 SM00869 Autotransporter beta-domain AMD13_RS11405 SM00052 Putative diguanylate phosphodiesterase AMD13_RS11430 SM00448 cheY-homologous receiver domain AMD13_RS11475 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS11480 SM00387 Histidine kinase-like ATPases AMD13_RS11485 SM00421 helix_turn_helix, Lux Regulon AMD13_RS11485 SM00448 cheY-homologous receiver domain AMD13_RS11490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS11530 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS11595 SM00966 SpoVT / AbrB like domain AMD13_RS11640 SM00736 Dystroglycan-type cadherin-like domains. AMD13_RS11660 SM00382 ATPases associated with a variety of cellular activities AMD13_RS11830 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS11870 SM00487 DEAD-like helicases superfamily AMD13_RS12125 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS12125 SM01240 AMD13_RS12125 AMD13_RS12150 SM00822 AMD13_RS12150 AMD13_RS12160 SM00028 Tetratricopeptide repeats AMD13_RS12170 SM00411 bacterial (prokaryotic) histone like domain AMD13_RS12175 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS12250 SM00354 helix_turn _helix lactose operon repressor AMD13_RS12275 SM00363 S4 RNA-binding domain AMD13_RS12300 SM00382 ATPases associated with a variety of cellular activities AMD13_RS12350 SM00357 Cold shock protein domain AMD13_RS12355 SM00382 ATPases associated with a variety of cellular activities AMD13_RS12360 SM00382 ATPases associated with a variety of cellular activities AMD13_RS12390 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD13_RS12400 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD13_RS12415 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD13_RS12455 SM00840 AMD13_RS12455 AMD13_RS12480 SM01234 AMD13_RS12480 AMD13_RS12520 SM00849 Metallo-beta-lactamase superfamily AMD13_RS12575 SM00841 Elongation factor P, C-terminal AMD13_RS12575 SM01185 AMD13_RS12575 AMD13_RS12585 SM00052 Putative diguanylate phosphodiesterase AMD13_RS12585 SM00267 diguanylate cyclase AMD13_RS12585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS12620 SM00382 ATPases associated with a variety of cellular activities AMD13_RS12625 SM00487 DEAD-like helicases superfamily AMD13_RS12625 SM00490 helicase superfamily c-terminal domain AMD13_RS12650 SM00357 Cold shock protein domain AMD13_RS12655 SM01322 AMD13_RS12655 AMD13_RS12665 SM00052 Putative diguanylate phosphodiesterase AMD13_RS12665 SM00267 diguanylate cyclase AMD13_RS12680 SM00822 AMD13_RS12680 AMD13_RS12700 SM00853 MutL C terminal dimerisation domain AMD13_RS12700 SM01340 AMD13_RS12700 AMD13_RS12705 SM00646 AMD13_RS12705 AMD13_RS12740 SM00474 3'-5' exonuclease AMD13_RS12755 SM00528 Domain in histone-like proteins of HNS family AMD13_RS12840 SM00857 Resolvase, N terminal domain AMD13_RS12910 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS12910 SM00267 diguanylate cyclase AMD13_RS12915 SM00260 Two component signalling adaptor domain AMD13_RS12920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS12920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS12930 SM00487 DEAD-like helicases superfamily AMD13_RS12930 SM00490 helicase superfamily c-terminal domain AMD13_RS12985 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS13010 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS13010 SM01091 Transporter associated domain AMD13_RS13045 SM00382 ATPases associated with a variety of cellular activities AMD13_RS13075 SM01230 AMD13_RS13075 AMD13_RS13085 SM01230 AMD13_RS13085 AMD13_RS13095 SM00267 diguanylate cyclase AMD13_RS13095 SM00448 cheY-homologous receiver domain AMD13_RS13145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS13145 SM00091 PAS domain AMD13_RS13145 SM00387 Histidine kinase-like ATPases AMD13_RS13145 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS13145 SM00448 cheY-homologous receiver domain AMD13_RS13145 SM01079 AMD13_RS13145 AMD13_RS13150 SM00448 cheY-homologous receiver domain AMD13_RS13150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD13_RS13180 SM00354 helix_turn _helix lactose operon repressor AMD13_RS13240 SM01323 AMD13_RS13240 AMD13_RS13255 SM00344 helix_turn_helix ASNC type AMD13_RS13335 SM00387 Histidine kinase-like ATPases AMD13_RS13380 SM00944 Pro-kumamolisin, activation domain AMD13_RS13430 SM01130 AMD13_RS13430 AMD13_RS13455 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS13460 SM00382 ATPases associated with a variety of cellular activities AMD13_RS13460 SM00962 SRP54-type protein, GTPase domain AMD13_RS13460 SM00963 SRP54-type protein, helical bundle domain AMD13_RS13465 SM00478 endonuclease III AMD13_RS13475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS13475 SM00091 PAS domain AMD13_RS13475 SM00387 Histidine kinase-like ATPases AMD13_RS13475 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS13475 SM00448 cheY-homologous receiver domain AMD13_RS13490 SM00465 GIY-YIG type nucleases (URI domain) AMD13_RS13520 SM00507 HNH nucleases AMD13_RS13525 SM00861 Transketolase, pyrimidine binding domain AMD13_RS13550 SM00849 Metallo-beta-lactamase superfamily AMD13_RS13635 SM00422 helix_turn_helix, mercury resistance AMD13_RS13640 SM00411 bacterial (prokaryotic) histone like domain AMD13_RS13645 SM00873 B3/4 domain AMD13_RS13645 SM00874 tRNA synthetase B5 domain AMD13_RS13645 SM00896 Ferredoxin-fold anticodon binding domain AMD13_RS13670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD13_RS13675 SM00354 helix_turn _helix lactose operon repressor AMD13_RS13680 SM00642 Alpha-amylase domain AMD13_RS13710 SM00642 Alpha-amylase domain AMD13_RS13755 SM00382 ATPases associated with a variety of cellular activities AMD13_RS13815 SM00487 DEAD-like helicases superfamily AMD13_RS13815 SM00490 helicase superfamily c-terminal domain AMD13_RS14065 SM01001 AIR carboxylase AMD13_RS14085 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS14085 SM00322 K homology RNA-binding domain AMD13_RS14090 SM01387 AMD13_RS14090 AMD13_RS14110 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS14110 SM00322 K homology RNA-binding domain AMD13_RS14160 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD13_RS14165 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD13_RS14210 SM00822 AMD13_RS14210 AMD13_RS14225 SM00052 Putative diguanylate phosphodiesterase AMD13_RS14225 SM00267 diguanylate cyclase AMD13_RS14225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS14300 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMD13_RS14330 SM00257 Lysin motif AMD13_RS14360 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS14425 SM01160 AMD13_RS14425 AMD13_RS14480 SM00098 Alkaline phosphatase homologues AMD13_RS14485 SM00977 TilS substrate C-terminal domain AMD13_RS14500 SM01351 AMD13_RS14500 AMD13_RS14535 SM00316 Ribosomal protein S1-like RNA-binding domain AMD13_RS14670 SM00382 ATPases associated with a variety of cellular activities AMD13_RS14700 SM00448 cheY-homologous receiver domain AMD13_RS14700 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS14705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS14705 SM00387 Histidine kinase-like ATPases AMD13_RS14705 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS14740 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS14740 SM00267 diguanylate cyclase AMD13_RS14745 SM00363 S4 RNA-binding domain AMD13_RS14750 SM00052 Putative diguanylate phosphodiesterase AMD13_RS14750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS14750 SM00091 PAS domain AMD13_RS14750 SM00267 diguanylate cyclase AMD13_RS14755 SM00487 DEAD-like helicases superfamily AMD13_RS14755 SM00490 helicase superfamily c-terminal domain AMD13_RS14800 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS14800 SM00478 endonuclease III AMD13_RS14800 SM01009 AlkA N-terminal domain AMD13_RS14820 SM00829 Enoylreductase AMD13_RS14885 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS14955 SM00645 Papain family cysteine protease AMD13_RS14960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS14960 SM00387 Histidine kinase-like ATPases AMD13_RS14960 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS14965 SM00448 cheY-homologous receiver domain AMD13_RS14965 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS14980 SM00487 DEAD-like helicases superfamily AMD13_RS14980 SM00490 helicase superfamily c-terminal domain AMD13_RS14980 SM00982 AMD13_RS14980 AMD13_RS14980 SM01058 CarD-like/TRCF domain AMD13_RS15015 SM00073 Histidine Phosphotransfer domain AMD13_RS15015 SM00260 Two component signalling adaptor domain AMD13_RS15015 SM00387 Histidine kinase-like ATPases AMD13_RS15015 SM01231 AMD13_RS15015 AMD13_RS15020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS15020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS15025 SM00260 Two component signalling adaptor domain AMD13_RS15030 SM00052 Putative diguanylate phosphodiesterase AMD13_RS15030 SM00448 cheY-homologous receiver domain AMD13_RS15035 SM00138 Methyltransferase, chemotaxis proteins AMD13_RS15040 SM00448 cheY-homologous receiver domain AMD13_RS15045 SM00155 Phospholipase D. Active site motifs. AMD13_RS15060 SM00855 Phosphoglycerate mutase family AMD13_RS15110 SM00248 ankyrin repeats AMD13_RS15155 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD13_RS15160 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMD13_RS15170 SM00829 Enoylreductase AMD13_RS15175 SM00267 diguanylate cyclase AMD13_RS15180 SM00487 DEAD-like helicases superfamily AMD13_RS15275 SM00732 Likely ribonuclease with RNase H fold. AMD13_RS15310 SM00382 ATPases associated with a variety of cellular activities AMD13_RS15325 SM00411 bacterial (prokaryotic) histone like domain AMD13_RS15355 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AMD13_RS15370 SM00382 ATPases associated with a variety of cellular activities AMD13_RS15400 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMD13_RS15405 SM00671 Sel1-like repeats. AMD13_RS15435 SM00054 EF-hand, calcium binding motif AMD13_RS15525 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS15545 SM00382 ATPases associated with a variety of cellular activities AMD13_RS15590 SM00924 MgtE intracellular N domain AMD13_RS15620 SM00656 AMD13_RS15620 AMD13_RS15635 SM00421 helix_turn_helix, Lux Regulon AMD13_RS15660 SM00849 Metallo-beta-lactamase superfamily AMD13_RS15670 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD13_RS15690 SM00422 helix_turn_helix, mercury resistance AMD13_RS15830 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS15840 SM00387 Histidine kinase-like ATPases AMD13_RS15840 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS15840 SM00448 cheY-homologous receiver domain AMD13_RS15845 SM00387 Histidine kinase-like ATPases AMD13_RS15845 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS15845 SM00448 cheY-homologous receiver domain AMD13_RS15855 SM00387 Histidine kinase-like ATPases AMD13_RS15855 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS15855 SM00448 cheY-homologous receiver domain AMD13_RS15860 SM00867 YceI-like domain AMD13_RS15870 SM00867 YceI-like domain AMD13_RS15925 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS15955 SM00028 Tetratricopeptide repeats AMD13_RS16055 SM00812 Alpha-L-fucosidase AMD13_RS16060 SM00636 AMD13_RS16060 AMD13_RS16075 SM00758 AMD13_RS16075 AMD13_RS16075 SM01217 AMD13_RS16075 AMD13_RS16105 SM01149 AMD13_RS16105 AMD13_RS16165 SM00260 Two component signalling adaptor domain AMD13_RS16175 SM00073 Histidine Phosphotransfer domain AMD13_RS16175 SM00260 Two component signalling adaptor domain AMD13_RS16175 SM00387 Histidine kinase-like ATPases AMD13_RS16175 SM00448 cheY-homologous receiver domain AMD13_RS16175 SM01231 AMD13_RS16175 AMD13_RS16180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS16185 SM00260 Two component signalling adaptor domain AMD13_RS16190 SM00448 cheY-homologous receiver domain AMD13_RS16195 SM00448 cheY-homologous receiver domain AMD13_RS16220 SM00491 AMD13_RS16220 AMD13_RS16245 SM00954 Region found in RelA / SpoT proteins AMD13_RS16290 SM00382 ATPases associated with a variety of cellular activities AMD13_RS16290 SM00487 DEAD-like helicases superfamily AMD13_RS16290 SM00490 helicase superfamily c-terminal domain AMD13_RS16290 SM00847 Helicase associated domain (HA2) Add an annotation AMD13_RS16300 SM00341 Helicase and RNase D C-terminal AMD13_RS16300 SM00487 DEAD-like helicases superfamily AMD13_RS16300 SM00490 helicase superfamily c-terminal domain AMD13_RS16300 SM00956 AMD13_RS16300 AMD13_RS16310 SM00448 cheY-homologous receiver domain AMD13_RS16335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS16335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS16350 SM00448 cheY-homologous receiver domain AMD13_RS16355 SM00091 PAS domain AMD13_RS16355 SM00911 HWE histidine kinase AMD13_RS16410 SM00382 ATPases associated with a variety of cellular activities AMD13_RS16425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD13_RS16460 SM00834 Putative regulatory protein AMD13_RS16500 SM00382 ATPases associated with a variety of cellular activities AMD13_RS16605 SM00855 Phosphoglycerate mutase family AMD13_RS16655 SM00382 ATPases associated with a variety of cellular activities AMD13_RS16655 SM01086 C-terminal, D2-small domain, of ClpB protein AMD13_RS16660 SM00382 ATPases associated with a variety of cellular activities AMD13_RS16670 SM00062 Bacterial periplasmic substrate-binding proteins AMD13_RS16745 SM00564 beta-propeller repeat AMD13_RS16750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS16855 SM01126 AMD13_RS16855 AMD13_RS16860 SM00881 CoA binding domain AMD13_RS16870 SM00387 Histidine kinase-like ATPases AMD13_RS16870 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS16875 SM00382 ATPases associated with a variety of cellular activities AMD13_RS16875 SM00448 cheY-homologous receiver domain AMD13_RS16940 SM00387 Histidine kinase-like ATPases AMD13_RS16940 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS16945 SM00448 cheY-homologous receiver domain AMD13_RS16945 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS16960 SM00642 Alpha-amylase domain AMD13_RS16965 SM00528 Domain in histone-like proteins of HNS family AMD13_RS16975 SM00318 Staphylococcal nuclease homologues AMD13_RS17040 SM00387 Histidine kinase-like ATPases AMD13_RS17040 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS17045 SM00448 cheY-homologous receiver domain AMD13_RS17060 SM01034 Sensors of blue-light using FAD AMD13_RS17110 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS17130 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS17130 SM00387 Histidine kinase-like ATPases AMD13_RS17155 SM00255 Toll - interleukin 1 - resistance AMD13_RS17170 SM00869 Autotransporter beta-domain AMD13_RS17225 SM00354 helix_turn _helix lactose operon repressor AMD13_RS17255 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD13_RS17365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS17365 SM00387 Histidine kinase-like ATPases AMD13_RS17400 SM00506 Appr-1"-p processing enzyme AMD13_RS17440 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD13_RS17465 SM00849 Metallo-beta-lactamase superfamily AMD13_RS17480 SM00382 ATPases associated with a variety of cellular activities AMD13_RS17545 SM00861 Transketolase, pyrimidine binding domain AMD13_RS17560 SM00028 Tetratricopeptide repeats AMD13_RS17560 SM00327 von Willebrand factor (vWF) type A domain AMD13_RS17565 SM00327 von Willebrand factor (vWF) type A domain AMD13_RS17580 SM00382 ATPases associated with a variety of cellular activities AMD13_RS17585 SM00965 Secretin and TonB N terminus short domain AMD13_RS17635 SM00487 DEAD-like helicases superfamily AMD13_RS17635 SM00490 helicase superfamily c-terminal domain AMD13_RS17645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD13_RS17645 SM00954 Region found in RelA / SpoT proteins AMD13_RS17650 SM01409 AMD13_RS17650 AMD13_RS17655 SM00072 Guanylate kinase homologues. AMD13_RS17680 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS17705 SM01011 Aminopeptidase P, N-terminal domain AMD13_RS17775 SM00028 Tetratricopeptide repeats AMD13_RS17775 SM00382 ATPases associated with a variety of cellular activities AMD13_RS17775 SM00421 helix_turn_helix, Lux Regulon AMD13_RS17845 SM00464 Found in ATP-dependent protease La (LON) AMD13_RS17895 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS17900 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS17915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS17945 SM00917 LeuA allosteric (dimerisation) domain AMD13_RS17950 SM01329 AMD13_RS17950 AMD13_RS17970 SM00267 diguanylate cyclase AMD13_RS18020 SM00919 Malic enzyme, NAD binding domain AMD13_RS18020 SM01274 AMD13_RS18020 AMD13_RS18035 SM00387 Histidine kinase-like ATPases AMD13_RS18035 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS18035 SM00448 cheY-homologous receiver domain AMD13_RS18070 SM00421 helix_turn_helix, Lux Regulon AMD13_RS18070 SM00448 cheY-homologous receiver domain AMD13_RS18080 SM00387 Histidine kinase-like ATPases AMD13_RS18080 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS18085 SM00448 cheY-homologous receiver domain AMD13_RS18085 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS18100 SM00822 AMD13_RS18100 AMD13_RS18105 SM00354 helix_turn _helix lactose operon repressor AMD13_RS18120 SM00642 Alpha-amylase domain AMD13_RS18130 SM01154 AMD13_RS18130 AMD13_RS18165 SM00450 Rhodanese Homology Domain AMD13_RS18225 SM00028 Tetratricopeptide repeats AMD13_RS18310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD13_RS18310 SM00866 AMD13_RS18310 AMD13_RS18370 SM00382 ATPases associated with a variety of cellular activities AMD13_RS18400 SM01211 AMD13_RS18400 AMD13_RS18465 SM00656 AMD13_RS18465 AMD13_RS18495 SM00528 Domain in histone-like proteins of HNS family AMD13_RS18510 SM00382 ATPases associated with a variety of cellular activities AMD13_RS18540 SM00882 Coenzyme A transferase AMD13_RS18545 SM00882 Coenzyme A transferase AMD13_RS18560 SM00984 UDP binding domain AMD13_RS18585 SM00893 Electron transfer flavoprotein domain AMD13_RS18590 SM00893 Electron transfer flavoprotein domain AMD13_RS18660 SM00382 ATPases associated with a variety of cellular activities AMD13_RS18675 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS18715 SM00487 DEAD-like helicases superfamily AMD13_RS18715 SM00490 helicase superfamily c-terminal domain AMD13_RS18750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS18785 SM00825 Beta-ketoacyl synthase AMD13_RS18855 SM00382 ATPases associated with a variety of cellular activities AMD13_RS18875 SM00382 ATPases associated with a variety of cellular activities AMD13_RS18875 SM00448 cheY-homologous receiver domain AMD13_RS18880 SM00387 Histidine kinase-like ATPases AMD13_RS18895 SM00830 Chorismate mutase type II AMD13_RS18905 SM00382 ATPases associated with a variety of cellular activities AMD13_RS18975 SM00986 Uracil DNA glycosylase superfamily AMD13_RS18975 SM00987 UreE urease accessory protein, C-terminal domain AMD13_RS19015 SM00382 ATPases associated with a variety of cellular activities AMD13_RS19015 SM00930 AMD13_RS19015 AMD13_RS19035 SM00387 Histidine kinase-like ATPases AMD13_RS19035 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS19035 SM00448 cheY-homologous receiver domain AMD13_RS19090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS19090 SM00091 PAS domain AMD13_RS19090 SM00387 Histidine kinase-like ATPases AMD13_RS19090 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS19090 SM00448 cheY-homologous receiver domain AMD13_RS19110 SM01005 Alanine racemase, C-terminal domain AMD13_RS19120 SM00344 helix_turn_helix ASNC type AMD13_RS19175 SM00382 ATPases associated with a variety of cellular activities AMD13_RS19185 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMD13_RS19190 SM00986 Uracil DNA glycosylase superfamily AMD13_RS19190 SM00987 UreE urease accessory protein, C-terminal domain AMD13_RS19195 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD13_RS19260 SM00448 cheY-homologous receiver domain AMD13_RS19260 SM00850 LytTr DNA-binding domain AMD13_RS19265 SM00387 Histidine kinase-like ATPases AMD13_RS19305 SM00091 PAS domain AMD13_RS19305 SM00138 Methyltransferase, chemotaxis proteins AMD13_RS19305 SM00911 HWE histidine kinase AMD13_RS19310 SM00448 cheY-homologous receiver domain AMD13_RS19320 SM00382 ATPases associated with a variety of cellular activities AMD13_RS19320 SM00448 cheY-homologous receiver domain AMD13_RS19375 SM00382 ATPases associated with a variety of cellular activities AMD13_RS19450 SM00382 ATPases associated with a variety of cellular activities AMD13_RS19455 SM00631 AMD13_RS19455 AMD13_RS19495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMD13_RS19495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS19500 SM00477 DNA/RNA non-specific endonuclease AMD13_RS19500 SM00892 DNA/RNA non-specific endonuclease AMD13_RS19650 SM00257 Lysin motif AMD13_RS19675 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMD13_RS19675 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMD13_RS19675 SM00493 AMD13_RS19675 AMD13_RS19730 SM00487 DEAD-like helicases superfamily AMD13_RS19730 SM00490 helicase superfamily c-terminal domain AMD13_RS19765 SM00986 Uracil DNA glycosylase superfamily AMD13_RS19765 SM00987 UreE urease accessory protein, C-terminal domain AMD13_RS19770 SM00448 cheY-homologous receiver domain AMD13_RS19780 SM00382 ATPases associated with a variety of cellular activities AMD13_RS19785 SM00487 DEAD-like helicases superfamily AMD13_RS19785 SM00490 helicase superfamily c-terminal domain AMD13_RS19795 SM00357 Cold shock protein domain AMD13_RS19795 SM00382 ATPases associated with a variety of cellular activities AMD13_RS19795 SM00959 Rho termination factor, N-terminal domain AMD13_RS19825 SM00487 DEAD-like helicases superfamily AMD13_RS19865 SM00257 Lysin motif AMD13_RS19895 SM01150 AMD13_RS19895 AMD13_RS19940 SM00644 AMD13_RS19940 AMD13_RS19950 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD13_RS19985 SM01217 AMD13_RS19985 AMD13_RS19990 SM00905 Dihydroneopterin aldolase AMD13_RS20015 SM00400 zinc finger AMD13_RS20015 SM00493 AMD13_RS20015 AMD13_RS20015 SM00766 DNA primase DnaG DnaB-binding AMD13_RS20115 SM00363 S4 RNA-binding domain AMD13_RS20160 SM00470 ParB-like nuclease domain AMD13_RS20180 SM01259 AMD13_RS20180 AMD13_RS20210 SM00836 DALR anticodon binding domain AMD13_RS20210 SM01016 Arginyl tRNA synthetase N terminal dom AMD13_RS20240 SM00823 Phosphopantetheine attachment site AMD13_RS20240 SM00824 Thioesterase AMD13_RS20285 SM00938 Nitrogen regulatory protein P-II AMD13_RS20295 SM00382 ATPases associated with a variety of cellular activities AMD13_RS20385 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS20405 SM00052 Putative diguanylate phosphodiesterase AMD13_RS20435 SM00244 prohibitin homologues AMD13_RS20485 SM00448 cheY-homologous receiver domain AMD13_RS20485 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS20490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD13_RS20490 SM00387 Histidine kinase-like ATPases AMD13_RS20490 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS20510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD13_RS20555 SM01060 AMD13_RS20555 AMD13_RS20570 SM00421 helix_turn_helix, Lux Regulon AMD13_RS20570 SM00448 cheY-homologous receiver domain AMD13_RS20585 SM00382 ATPases associated with a variety of cellular activities AMD13_RS20625 SM00849 Metallo-beta-lactamase superfamily AMD13_RS20655 SM00960 Roadblock/LC7 domain AMD13_RS20720 SM00387 Histidine kinase-like ATPases AMD13_RS20720 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS20725 SM00448 cheY-homologous receiver domain AMD13_RS20725 SM00862 Transcriptional regulatory protein, C terminal AMD13_RS20745 SM00248 ankyrin repeats AMD13_RS20755 SM00491 AMD13_RS20755 AMD13_RS20785 SM00477 DNA/RNA non-specific endonuclease AMD13_RS20785 SM00892 DNA/RNA non-specific endonuclease AMD13_RS20800 SM01004 Delta-aminolevulinic acid dehydratase AMD13_RS20850 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMD13_RS20870 SM00382 ATPases associated with a variety of cellular activities AMD13_RS20880 SM00530 Helix-turn-helix XRE-family like proteins AMD13_RS20920 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS20930 SM00382 ATPases associated with a variety of cellular activities AMD13_RS20990 SM00881 CoA binding domain AMD13_RS20995 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD13_RS20995 SM00924 MgtE intracellular N domain AMD13_RS21000 SM01057 Eukaryotic-type carbonic anhydrase AMD13_RS21025 SM00248 ankyrin repeats AMD13_RS21035 SM00825 Beta-ketoacyl synthase AMD13_RS21060 SM00822 AMD13_RS21060 AMD13_RS21105 SM00563 Phosphate acyltransferases AMD13_RS21160 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD13_RS21160 SM00474 3'-5' exonuclease AMD13_RS21160 SM00475 5'-3' exonuclease AMD13_RS21160 SM00482 DNA polymerase A domain AMD13_RS21175 SM00912 haemagglutination activity domain AMD13_RS21195 SM00331 Sigma factor PP2C-like phosphatases AMD13_RS21195 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD13_RS21220 SM00240 Forkhead associated domain AMD13_RS21235 SM00028 Tetratricopeptide repeats AMD13_RS21245 SM00220 Serine/Threonine protein kinases, catalytic domain AMD13_RS21265 SM00965 Secretin and TonB N terminus short domain AMD13_RS21275 SM00915 Jacalin-like lectin domain AMD13_RS21300 SM00382 ATPases associated with a variety of cellular activities AMD13_RS21300 SM01086 C-terminal, D2-small domain, of ClpB protein AMD13_RS21340 SM00342 helix_turn_helix, arabinose operon control protein AMD13_RS21350 SM01266 AMD13_RS21350 AMD13_RS21370 SM00155 Phospholipase D. Active site motifs. AMD13_RS21510 SM00421 helix_turn_helix, Lux Regulon AMD13_RS21510 SM00448 cheY-homologous receiver domain AMD13_RS21565 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD13_RS21585 SM00346 helix_turn_helix isocitrate lyase regulation AMD13_RS21595 SM00091 PAS domain AMD13_RS21595 SM00387 Histidine kinase-like ATPases AMD13_RS21595 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS21595 SM00448 cheY-homologous receiver domain AMD13_RS21625 SM00564 beta-propeller repeat AMD13_RS21680 SM00382 ATPases associated with a variety of cellular activities AMD13_RS21685 SM00836 DALR anticodon binding domain AMD13_RS21695 SM00382 ATPases associated with a variety of cellular activities AMD13_RS21770 SM00354 helix_turn _helix lactose operon repressor AMD13_RS21785 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMD13_RS21795 SM00758 AMD13_RS21795 AMD13_RS21795 SM01217 AMD13_RS21795 AMD13_RS21815 SM00612 AMD13_RS21815 AMD13_RS21845 SM01007 Class II Aldolase and Adducin N-terminal domain AMD13_RS21880 SM00633 Glycosyl hydrolase family 10 AMD13_RS21895 SM00633 Glycosyl hydrolase family 10 AMD13_RS21910 SM00633 Glycosyl hydrolase family 10 AMD13_RS21965 SM00829 Enoylreductase AMD13_RS21970 SM00563 Phosphate acyltransferases AMD13_RS21980 SM00354 helix_turn _helix lactose operon repressor AMD13_RS22005 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD13_RS22040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS22040 SM00388 His Kinase A (phosphoacceptor) domain AMD13_RS22055 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD13_RS22055 SM01232 AMD13_RS22055 AMD13_RS22095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS22095 SM00091 PAS domain AMD13_RS22150 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD13_RS22185 SM00155 Phospholipase D. Active site motifs. AMD13_RS22270 SM00796 Allophanate hydrolase subunit 1 AMD13_RS22270 SM00797 Allophanate hydrolase subunit 2 AMD13_RS22270 SM00878 Biotin carboxylase C-terminal domain AMD13_RS22330 SM00382 ATPases associated with a variety of cellular activities AMD13_RS22380 SM00829 Enoylreductase AMD13_RS22420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD13_RS22420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMD13_RS22420 SM00091 PAS domain AMD13_RS22420 SM00267 diguanylate cyclase AMD13_RS22450 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMD13_RS22475 SM00014 Acid phosphatase homologues AMD13_RS22485 SM00028 Tetratricopeptide repeats