locus-tag class description AMD18_RS00260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD18_RS00315 PF00150 Cellulase (glycosyl hydrolase family 5) AMD18_RS00360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS00360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD18_RS00375 PF00310 Glutamine amidotransferases class-II AMD18_RS00375 PF04898 Glutamate synthase central domain AMD18_RS00375 PF01645 Conserved region in glutamate synthase AMD18_RS00375 PF01493 GXGXG motif AMD18_RS00385 PF00310 Glutamine amidotransferases class-II AMD18_RS00385 PF04898 Glutamate synthase central domain AMD18_RS00385 PF01645 Conserved region in glutamate synthase AMD18_RS00385 PF01493 GXGXG motif AMD18_RS00480 PF13537 Glutamine amidotransferase domain AMD18_RS00480 PF00733 Asparagine synthase AMD18_RS00500 PF08299 Bacterial dnaA protein helix-turn-helix AMD18_RS00500 PF11638 DnaA N-terminal domain AMD18_RS00500 PF00308 Bacterial dnaA protein AMD18_RS00505 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD18_RS00505 PF02767 DNA polymerase III beta subunit, central domain AMD18_RS00505 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD18_RS00510 PF02463 RecF/RecN/SMC N terminal domain AMD18_RS00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS00515 PF00204 DNA gyrase B AMD18_RS00515 PF00986 DNA gyrase B subunit, carboxyl terminus AMD18_RS00515 PF18053 DNA gyrase B subunit insert domain AMD18_RS00515 PF01751 Toprim domain AMD18_RS00525 PF01435 Peptidase family M48 AMD18_RS00535 PF03544 Gram-negative bacterial TonB protein C-terminal AMD18_RS00540 PF01618 MotA/TolQ/ExbB proton channel family AMD18_RS00545 PF02472 Biopolymer transport protein ExbD/TolR AMD18_RS00550 PF02472 Biopolymer transport protein ExbD/TolR AMD18_RS00555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD18_RS00565 PF13396 Phospholipase_D-nuclease N-terminal AMD18_RS00565 PF13091 PLD-like domain AMD18_RS00580 PF04055 Radical SAM superfamily AMD18_RS00590 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMD18_RS00605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD18_RS00605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD18_RS00610 PF03572 Peptidase family S41 AMD18_RS00610 PF13180 PDZ domain AMD18_RS00615 PF01551 Peptidase family M23 AMD18_RS00625 PF04389 Peptidase family M28 AMD18_RS00635 PF00150 Cellulase (glycosyl hydrolase family 5) AMD18_RS00640 PF00150 Cellulase (glycosyl hydrolase family 5) AMD18_RS00645 PF00150 Cellulase (glycosyl hydrolase family 5) AMD18_RS00650 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS00650 PF00107 Zinc-binding dehydrogenase AMD18_RS00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS00655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD18_RS00660 PF01493 GXGXG motif AMD18_RS00660 PF01645 Conserved region in glutamate synthase AMD18_RS00660 PF04898 Glutamate synthase central domain AMD18_RS00660 PF00310 Glutamine amidotransferases class-II AMD18_RS00690 PF03466 LysR substrate binding domain AMD18_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS00705 PF02397 Bacterial sugar transferase AMD18_RS00710 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD18_RS00720 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD18_RS00725 PF00534 Glycosyl transferases group 1 AMD18_RS00725 PF13439 Glycosyltransferase Family 4 AMD18_RS00745 PF00733 Asparagine synthase AMD18_RS00745 PF13537 Glutamine amidotransferase domain AMD18_RS00760 PF16363 GDP-mannose 4,6 dehydratase AMD18_RS00775 PF00664 ABC transporter transmembrane region AMD18_RS00775 PF00005 ABC transporter AMD18_RS00790 PF13537 Glutamine amidotransferase domain AMD18_RS00790 PF00733 Asparagine synthase AMD18_RS00805 PF07475 HPr Serine kinase C-terminal domain AMD18_RS00805 PF02603 HPr Serine kinase N terminus AMD18_RS00810 PF00685 Sulfotransferase domain AMD18_RS00885 PF09369 Domain of unknown function (DUF1998) AMD18_RS00885 PF00270 DEAD/DEAH box helicase AMD18_RS00885 PF00271 Helicase conserved C-terminal domain AMD18_RS00890 PF03006 Haemolysin-III related AMD18_RS00905 PF00106 short chain dehydrogenase AMD18_RS00915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS00915 PF03466 LysR substrate binding domain AMD18_RS00930 PF02525 Flavodoxin-like fold AMD18_RS00990 PF05532 CsbD-like AMD18_RS01010 PF01447 Thermolysin metallopeptidase, catalytic domain AMD18_RS01010 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD18_RS01010 PF16485 Protealysin propeptide AMD18_RS01020 PF13344 Haloacid dehalogenase-like hydrolase AMD18_RS01020 PF00293 NUDIX domain AMD18_RS01040 PF00085 Thioredoxin AMD18_RS01050 PF08946 Osmosensory transporter coiled coil AMD18_RS01050 PF00083 Sugar (and other) transporter AMD18_RS01090 PF17863 AAA lid domain AMD18_RS01090 PF07726 ATPase family associated with various cellular activities (AAA) AMD18_RS01120 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMD18_RS01125 PF00155 Aminotransferase class I and II AMD18_RS01130 PF00593 TonB dependent receptor AMD18_RS01130 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS01140 PF07883 Cupin domain AMD18_RS01145 PF00171 Aldehyde dehydrogenase family AMD18_RS01165 PF02735 Ku70/Ku80 beta-barrel domain AMD18_RS01170 PF01070 FMN-dependent dehydrogenase AMD18_RS01180 PF00144 Beta-lactamase AMD18_RS01185 PF07730 Histidine kinase AMD18_RS01190 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS01190 PF00072 Response regulator receiver domain AMD18_RS01210 PF18500 CadC C-terminal domain 1 AMD18_RS01210 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS01215 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMD18_RS01215 PF07055 Enoyl reductase FAD binding domain AMD18_RS01215 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMD18_RS01225 PF00294 pfkB family carbohydrate kinase AMD18_RS01285 PF13276 HTH-like domain AMD18_RS01285 PF00665 Integrase core domain AMD18_RS01285 PF13333 Integrase core domain AMD18_RS01290 PF11896 Domain of unknown function (DUF3416) AMD18_RS01290 PF00128 Alpha amylase, catalytic domain AMD18_RS01295 PF16657 Maltogenic Amylase, C-terminal domain AMD18_RS01295 PF00128 Alpha amylase, catalytic domain AMD18_RS01300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD18_RS01300 PF00128 Alpha amylase, catalytic domain AMD18_RS01300 PF02806 Alpha amylase, C-terminal all-beta domain AMD18_RS01310 PF00248 Aldo/keto reductase family AMD18_RS01315 PF00135 Carboxylesterase family AMD18_RS01320 PF07859 alpha/beta hydrolase fold AMD18_RS01320 PF13472 GDSL-like Lipase/Acylhydrolase family AMD18_RS01330 PF03480 Bacterial extracellular solute-binding protein, family 7 AMD18_RS01340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMD18_RS01345 PF04616 Glycosyl hydrolases family 43 AMD18_RS01345 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD18_RS01350 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS01355 PF04962 KduI/IolB family AMD18_RS01370 PF00657 GDSL-like Lipase/Acylhydrolase AMD18_RS01385 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMD18_RS01390 PF01037 Lrp/AsnC ligand binding domain AMD18_RS01395 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS01395 PF07660 Secretin and TonB N terminus short domain AMD18_RS01395 PF00593 TonB dependent receptor AMD18_RS01400 PF01734 Patatin-like phospholipase AMD18_RS01410 PF00005 ABC transporter AMD18_RS01425 PF00005 ABC transporter AMD18_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS01440 PF12867 DinB superfamily AMD18_RS01440 PF03781 Sulfatase-modifying factor enzyme 1 AMD18_RS01460 PF01381 Helix-turn-helix AMD18_RS01485 PF10609 NUBPL iron-transfer P-loop NTPase AMD18_RS01485 PF01883 Iron-sulfur cluster assembly protein AMD18_RS01500 PF13091 PLD-like domain AMD18_RS01505 PF03061 Thioesterase superfamily AMD18_RS01535 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS01535 PF00107 Zinc-binding dehydrogenase AMD18_RS01545 PF02673 Bacitracin resistance protein BacA AMD18_RS01550 PF00120 Glutamine synthetase, catalytic domain AMD18_RS01550 PF03951 Glutamine synthetase, beta-Grasp domain AMD18_RS01555 PF00543 Nitrogen regulatory protein P-II AMD18_RS01560 PF00909 Ammonium Transporter Family AMD18_RS01565 PF00989 PAS fold AMD18_RS01565 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS01570 PF02954 Bacterial regulatory protein, Fis family AMD18_RS01570 PF00072 Response regulator receiver domain AMD18_RS01570 PF00158 Sigma-54 interaction domain AMD18_RS01575 PF00080 Copper/zinc superoxide dismutase (SODC) AMD18_RS01580 PF00080 Copper/zinc superoxide dismutase (SODC) AMD18_RS01585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD18_RS01595 PF02803 Thiolase, C-terminal domain AMD18_RS01595 PF00108 Thiolase, N-terminal domain AMD18_RS01630 PF00581 Rhodanese-like domain AMD18_RS01635 PF02556 Preprotein translocase subunit SecB AMD18_RS01640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD18_RS01640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD18_RS01650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD18_RS01650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD18_RS01650 PF00205 Thiamine pyrophosphate enzyme, central domain AMD18_RS01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS01660 PF00158 Sigma-54 interaction domain AMD18_RS01660 PF00072 Response regulator receiver domain AMD18_RS01660 PF02954 Bacterial regulatory protein, Fis family AMD18_RS01675 PF07690 Major Facilitator Superfamily AMD18_RS01680 PF00588 SpoU rRNA Methylase family AMD18_RS01695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD18_RS01695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD18_RS01700 PF13784 Fic/DOC family N-terminal AMD18_RS01700 PF02661 Fic/DOC family AMD18_RS01705 PF00561 alpha/beta hydrolase fold AMD18_RS01710 PF03692 Putative zinc- or iron-chelating domain AMD18_RS01715 PF00501 AMP-binding enzyme AMD18_RS01720 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD18_RS01735 PF01820 D-ala D-ala ligase N-terminus AMD18_RS01735 PF07478 D-ala D-ala ligase C-terminus AMD18_RS01745 PF03109 ABC1 family AMD18_RS01755 PF00849 RNA pseudouridylate synthase AMD18_RS01765 PF00472 RF-1 domain AMD18_RS01775 PF01112 Asparaginase AMD18_RS01780 PF01432 Peptidase family M3 AMD18_RS01785 PF12706 Beta-lactamase superfamily domain AMD18_RS01805 PF12833 Helix-turn-helix domain AMD18_RS01810 PF00999 Sodium/hydrogen exchanger family AMD18_RS01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS01815 PF03466 LysR substrate binding domain AMD18_RS01820 PF01274 Malate synthase AMD18_RS01825 PF00463 Isocitrate lyase family AMD18_RS01830 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS01850 PF00326 Prolyl oligopeptidase family AMD18_RS01855 PF00364 Biotin-requiring enzyme AMD18_RS01855 PF02785 Biotin carboxylase C-terminal domain AMD18_RS01855 PF00289 Biotin carboxylase, N-terminal domain AMD18_RS01855 PF18140 Propionyl-coenzyme A carboxylase BT domain AMD18_RS01855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD18_RS01860 PF01039 Carboxyl transferase domain AMD18_RS01865 PF02770 Acyl-CoA dehydrogenase, middle domain AMD18_RS01865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD18_RS01865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD18_RS01920 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD18_RS01920 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD18_RS01945 PF03969 AFG1-like ATPase AMD18_RS01950 PF01047 MarR family AMD18_RS01955 PF02566 OsmC-like protein AMD18_RS01985 PF00107 Zinc-binding dehydrogenase AMD18_RS01985 PF16884 N-terminal domain of oxidoreductase AMD18_RS01990 PF00248 Aldo/keto reductase family AMD18_RS02000 PF00849 RNA pseudouridylate synthase AMD18_RS02005 PF00593 TonB dependent receptor AMD18_RS02015 PF08482 ATP-dependent helicase C-terminal AMD18_RS02015 PF00271 Helicase conserved C-terminal domain AMD18_RS02015 PF04408 Helicase associated domain (HA2) AMD18_RS02015 PF00270 DEAD/DEAH box helicase AMD18_RS02025 PF07308 Protein of unknown function (DUF1456) AMD18_RS02030 PF00576 HIUase/Transthyretin family AMD18_RS02035 PF13454 FAD-NAD(P)-binding AMD18_RS02040 PF01014 Uricase AMD18_RS02040 PF09349 OHCU decarboxylase AMD18_RS02055 PF00266 Aminotransferase class-V AMD18_RS02060 PF01546 Peptidase family M20/M25/M40 AMD18_RS02060 PF07687 Peptidase dimerisation domain AMD18_RS02065 PF03466 LysR substrate binding domain AMD18_RS02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS02070 PF07690 Major Facilitator Superfamily AMD18_RS02085 PF01425 Amidase AMD18_RS02090 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD18_RS02100 PF00860 Permease family AMD18_RS02110 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD18_RS02115 PF00355 Rieske [2Fe-2S] domain AMD18_RS02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS02120 PF03466 LysR substrate binding domain AMD18_RS02125 PF01026 TatD related DNase AMD18_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS02140 PF03466 LysR substrate binding domain AMD18_RS02145 PF07690 Major Facilitator Superfamily AMD18_RS02160 PF02146 Sir2 family AMD18_RS02165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD18_RS02170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD18_RS02170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD18_RS02180 PF00551 Formyl transferase AMD18_RS02185 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS02185 PF00072 Response regulator receiver domain AMD18_RS02190 PF00672 HAMP domain AMD18_RS02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS02190 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS02195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS02195 PF00529 HlyD membrane-fusion protein of T1SS AMD18_RS02200 PF00873 AcrB/AcrD/AcrF family AMD18_RS02205 PF02321 Outer membrane efflux protein AMD18_RS02215 PF02219 Methylenetetrahydrofolate reductase AMD18_RS02220 PF02677 Epoxyqueuosine reductase QueH AMD18_RS02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS02225 PF03466 LysR substrate binding domain AMD18_RS02230 PF03358 NADPH-dependent FMN reductase AMD18_RS02240 PF01717 Cobalamin-independent synthase, Catalytic domain AMD18_RS02240 PF08267 Cobalamin-independent synthase, N-terminal domain AMD18_RS02245 PF03812 2-keto-3-deoxygluconate permease AMD18_RS02255 PF05368 NmrA-like family AMD18_RS02260 PF01638 HxlR-like helix-turn-helix AMD18_RS02285 PF13276 HTH-like domain AMD18_RS02285 PF13333 Integrase core domain AMD18_RS02285 PF00665 Integrase core domain AMD18_RS02295 PF13495 Phage integrase, N-terminal SAM-like domain AMD18_RS02295 PF00589 Phage integrase family AMD18_RS02300 PF00920 Dehydratase family AMD18_RS02320 PF00132 Bacterial transferase hexapeptide (six repeats) AMD18_RS02330 PF07690 Major Facilitator Superfamily AMD18_RS02335 PF01966 HD domain AMD18_RS02335 PF11871 Domain of unknown function (DUF3391) AMD18_RS02355 PF00171 Aldehyde dehydrogenase family AMD18_RS02365 PF01494 FAD binding domain AMD18_RS02375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD18_RS02375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD18_RS02380 PF00230 Major intrinsic protein AMD18_RS02385 PF01266 FAD dependent oxidoreductase AMD18_RS02385 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMD18_RS02390 PF08220 DeoR-like helix-turn-helix domain AMD18_RS02390 PF00455 DeoR C terminal sensor domain AMD18_RS02395 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD18_RS02395 PF00970 Oxidoreductase FAD-binding domain AMD18_RS02400 PF00355 Rieske [2Fe-2S] domain AMD18_RS02405 PF01144 Coenzyme A transferase AMD18_RS02410 PF01144 Coenzyme A transferase AMD18_RS02415 PF00108 Thiolase, N-terminal domain AMD18_RS02415 PF02803 Thiolase, C-terminal domain AMD18_RS02420 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AMD18_RS02420 PF00775 Dioxygenase AMD18_RS02430 PF00206 Lyase AMD18_RS02430 PF10397 Adenylosuccinate lyase C-terminus AMD18_RS02435 PF12146 Serine aminopeptidase, S33 AMD18_RS02440 PF02627 Carboxymuconolactone decarboxylase family AMD18_RS02450 PF09339 IclR helix-turn-helix domain AMD18_RS02450 PF01614 Bacterial transcriptional regulator AMD18_RS02460 PF07859 alpha/beta hydrolase fold AMD18_RS02465 PF10677 Protein of unknown function (DUF2490) AMD18_RS02470 PF13932 GidA associated domain AMD18_RS02470 PF01134 Glucose inhibited division protein A AMD18_RS02480 PF00291 Pyridoxal-phosphate dependent enzyme AMD18_RS02500 PF13649 Methyltransferase domain AMD18_RS02510 PF12697 Alpha/beta hydrolase family AMD18_RS02520 PF00155 Aminotransferase class I and II AMD18_RS02525 PF06968 Biotin and Thiamin Synthesis associated domain AMD18_RS02525 PF04055 Radical SAM superfamily AMD18_RS02535 PF01040 UbiA prenyltransferase family AMD18_RS02550 PF05819 NolX protein AMD18_RS02585 PF01313 Bacterial export proteins, family 3 AMD18_RS02590 PF00813 FliP family AMD18_RS02605 PF00771 FHIPEP family AMD18_RS02610 PF01312 FlhB HrpN YscU SpaS Family AMD18_RS02625 PF01514 Secretory protein of YscJ/FliF family AMD18_RS02640 PF18269 T3SS EscN ATPase C-terminal domain AMD18_RS02640 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD18_RS02640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD18_RS02650 PF01311 Bacterial export proteins, family 1 AMD18_RS02655 PF00263 Bacterial type II and III secretion system protein AMD18_RS02655 PF03958 Bacterial type II/III secretion system short domain AMD18_RS02665 PF01464 Transglycosylase SLT domain AMD18_RS02680 PF00924 Mechanosensitive ion channel AMD18_RS02680 PF12795 Mechanosensitive ion channel porin domain AMD18_RS02680 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMD18_RS02685 PF00884 Sulfatase AMD18_RS02690 PF03109 ABC1 family AMD18_RS02695 PF05661 Protein of unknown function (DUF808) AMD18_RS02700 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS02705 PF00534 Glycosyl transferases group 1 AMD18_RS02705 PF08323 Starch synthase catalytic domain AMD18_RS02710 PF00128 Alpha amylase, catalytic domain AMD18_RS02710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD18_RS02710 PF02806 Alpha amylase, C-terminal all-beta domain AMD18_RS02715 PF00128 Alpha amylase, catalytic domain AMD18_RS02715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD18_RS02715 PF11941 Domain of unknown function (DUF3459) AMD18_RS02720 PF02446 4-alpha-glucanotransferase AMD18_RS02725 PF00128 Alpha amylase, catalytic domain AMD18_RS02735 PF00128 Alpha amylase, catalytic domain AMD18_RS02735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD18_RS02740 PF13460 NAD(P)H-binding AMD18_RS02760 PF06903 VirK protein AMD18_RS02765 PF02321 Outer membrane efflux protein AMD18_RS02780 PF00873 AcrB/AcrD/AcrF family AMD18_RS02795 PF00271 Helicase conserved C-terminal domain AMD18_RS02795 PF00270 DEAD/DEAH box helicase AMD18_RS02800 PF00364 Biotin-requiring enzyme AMD18_RS02800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD18_RS02800 PF02817 e3 binding domain AMD18_RS02810 PF02779 Transketolase, pyrimidine binding domain AMD18_RS02810 PF02780 Transketolase, C-terminal domain AMD18_RS02815 PF00676 Dehydrogenase E1 component AMD18_RS02825 PF03301 Tryptophan 2,3-dioxygenase AMD18_RS02830 PF00854 POT family AMD18_RS02840 PF01047 MarR family AMD18_RS02845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD18_RS02850 PF04209 homogentisate 1,2-dioxygenase AMD18_RS02865 PF03334 Na+/H+ antiporter subunit AMD18_RS02870 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMD18_RS02880 PF00361 Proton-conducting membrane transporter AMD18_RS02885 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD18_RS02890 PF00361 Proton-conducting membrane transporter AMD18_RS02890 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMD18_RS02890 PF13244 Domain of unknown function (DUF4040) AMD18_RS02890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD18_RS02905 PF07504 Fungalysin/Thermolysin Propeptide Motif AMD18_RS02905 PF01483 Proprotein convertase P-domain AMD18_RS02905 PF01447 Thermolysin metallopeptidase, catalytic domain AMD18_RS02905 PF02868 Thermolysin metallopeptidase, alpha-helical domain AMD18_RS02910 PF00182 Chitinase class I AMD18_RS02930 PF01259 SAICAR synthetase AMD18_RS02935 PF00226 DnaJ domain AMD18_RS02935 PF05099 Tellurite resistance protein TerB AMD18_RS02945 PF00834 Ribulose-phosphate 3 epimerase family AMD18_RS02950 PF00583 Acetyltransferase (GNAT) family AMD18_RS02955 PF00781 Diacylglycerol kinase catalytic domain AMD18_RS02960 PF04715 Anthranilate synthase component I, N terminal region AMD18_RS02960 PF00425 chorismate binding enzyme AMD18_RS02970 PF00117 Glutamine amidotransferase class-I AMD18_RS02980 PF02885 Glycosyl transferase family, helical bundle domain AMD18_RS02980 PF00591 Glycosyl transferase family, a/b domain AMD18_RS02985 PF00218 Indole-3-glycerol phosphate synthase AMD18_RS02995 PF00027 Cyclic nucleotide-binding domain AMD18_RS02995 PF00325 Bacterial regulatory proteins, crp family AMD18_RS03000 PF02675 S-adenosylmethionine decarboxylase AMD18_RS03005 PF00893 Small Multidrug Resistance protein AMD18_RS03010 PF03232 Ubiquinone biosynthesis protein COQ7 AMD18_RS03015 PF00572 Ribosomal protein L13 AMD18_RS03020 PF00380 Ribosomal protein S9/S16 AMD18_RS03035 PF00293 NUDIX domain AMD18_RS03045 PF00210 Ferritin-like domain AMD18_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS03050 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS03050 PF00672 HAMP domain AMD18_RS03050 PF01627 Hpt domain AMD18_RS03050 PF00072 Response regulator receiver domain AMD18_RS03050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD18_RS03055 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS03055 PF00072 Response regulator receiver domain AMD18_RS03075 PF01521 Iron-sulphur cluster biosynthesis AMD18_RS03095 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD18_RS03095 PF00293 NUDIX domain AMD18_RS03095 PF09297 NADH pyrophosphatase zinc ribbon domain AMD18_RS03100 PF17113 Regulatory signalling modulator protein AmpE AMD18_RS03100 PF03186 CobD/Cbib protein AMD18_RS03120 PF07690 Major Facilitator Superfamily AMD18_RS03125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS03125 PF03466 LysR substrate binding domain AMD18_RS03130 PF07690 Major Facilitator Superfamily AMD18_RS03135 PF12805 FUSC-like inner membrane protein yccS AMD18_RS03145 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD18_RS03145 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD18_RS03145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD18_RS03155 PF02142 MGS-like domain AMD18_RS03155 PF01808 AICARFT/IMPCHase bienzyme AMD18_RS03160 PF01066 CDP-alcohol phosphatidyltransferase AMD18_RS03165 PF12146 Serine aminopeptidase, S33 AMD18_RS03165 PF12147 Putative methyltransferase AMD18_RS03170 PF00782 Dual specificity phosphatase, catalytic domain AMD18_RS03200 PF02954 Bacterial regulatory protein, Fis family AMD18_RS03215 PF01381 Helix-turn-helix AMD18_RS03240 PF02785 Biotin carboxylase C-terminal domain AMD18_RS03240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD18_RS03240 PF00289 Biotin carboxylase, N-terminal domain AMD18_RS03250 PF00364 Biotin-requiring enzyme AMD18_RS03255 PF01220 Dehydroquinase class II AMD18_RS03260 PF11412 Disulphide bond corrector protein DsbC AMD18_RS03260 PF02683 Cytochrome C biogenesis protein transmembrane region AMD18_RS03265 PF03091 CutA1 divalent ion tolerance protein AMD18_RS03280 PF01852 START domain AMD18_RS03290 PF00106 short chain dehydrogenase AMD18_RS03295 PF04231 Endonuclease I AMD18_RS03300 PF00166 Chaperonin 10 Kd subunit AMD18_RS03305 PF00118 TCP-1/cpn60 chaperonin family AMD18_RS03315 PF00593 TonB dependent receptor AMD18_RS03315 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS03320 PF00793 DAHP synthetase I family AMD18_RS03335 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD18_RS03345 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD18_RS03345 PF08335 GlnD PII-uridylyltransferase AMD18_RS03350 PF02592 Putative vitamin uptake transporter AMD18_RS03370 PF00881 Nitroreductase family AMD18_RS03375 PF04264 YceI-like domain AMD18_RS03400 PF16957 Malonate decarboxylase, alpha subunit, transporter AMD18_RS03405 PF06857 Malonate decarboxylase delta subunit (MdcD) AMD18_RS03410 PF01039 Carboxyl transferase domain AMD18_RS03420 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AMD18_RS03425 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AMD18_RS03430 PF00698 Acyl transferase domain AMD18_RS03440 PF00392 Bacterial regulatory proteins, gntR family AMD18_RS03440 PF07729 FCD domain AMD18_RS03445 PF13419 Haloacid dehalogenase-like hydrolase AMD18_RS03475 PF07745 Glycosyl hydrolase family 53 AMD18_RS03480 PF17831 Pyruvate dehydrogenase E1 component middle domain AMD18_RS03480 PF00456 Transketolase, thiamine diphosphate binding domain AMD18_RS03485 PF00665 Integrase core domain AMD18_RS03485 PF13276 HTH-like domain AMD18_RS03485 PF13333 Integrase core domain AMD18_RS03495 PF00106 short chain dehydrogenase AMD18_RS03510 PF00106 short chain dehydrogenase AMD18_RS03520 PF13409 Glutathione S-transferase, N-terminal domain AMD18_RS03545 PF03176 MMPL family AMD18_RS03545 PF12823 Domain of unknown function (DUF3817) AMD18_RS03550 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD18_RS03550 PF00326 Prolyl oligopeptidase family AMD18_RS03555 PF07759 Protein of unknown function (DUF1615) AMD18_RS03565 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS03590 PF00892 EamA-like transporter family AMD18_RS03595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD18_RS03605 PF00324 Amino acid permease AMD18_RS03615 PF01544 CorA-like Mg2+ transporter protein AMD18_RS03625 PF01204 Trehalase AMD18_RS03635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD18_RS03635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD18_RS03660 PF08448 PAS fold AMD18_RS03660 PF00563 EAL domain AMD18_RS03660 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS03660 PF08447 PAS fold AMD18_RS03665 PF00672 HAMP domain AMD18_RS03665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS03665 PF02203 Tar ligand binding domain homologue AMD18_RS03670 PF00553 Cellulose binding domain AMD18_RS03670 PF00150 Cellulase (glycosyl hydrolase family 5) AMD18_RS03675 PF01740 STAS domain AMD18_RS03675 PF00916 Sulfate permease family AMD18_RS03680 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS03695 PF13632 Glycosyl transferase family group 2 AMD18_RS03705 PF07694 5TMR of 5TMR-LYT AMD18_RS03705 PF06580 Histidine kinase AMD18_RS03710 PF04397 LytTr DNA-binding domain AMD18_RS03710 PF00072 Response regulator receiver domain AMD18_RS03715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD18_RS03715 PF03900 Porphobilinogen deaminase, C-terminal domain AMD18_RS03740 PF00326 Prolyl oligopeptidase family AMD18_RS03740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD18_RS03750 PF00155 Aminotransferase class I and II AMD18_RS03755 PF00326 Prolyl oligopeptidase family AMD18_RS03755 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMD18_RS03760 PF04304 Protein of unknown function (DUF454) AMD18_RS03770 PF01678 Diaminopimelate epimerase AMD18_RS03780 PF02899 Phage integrase, N-terminal SAM-like domain AMD18_RS03780 PF00589 Phage integrase family AMD18_RS03785 PF00227 Proteasome subunit AMD18_RS03790 PF00004 ATPase family associated with various cellular activities (AAA) AMD18_RS03790 PF07724 AAA domain (Cdc48 subfamily) AMD18_RS03790 PF10431 C-terminal, D2-small domain, of ClpB protein AMD18_RS03800 PF13673 Acetyltransferase (GNAT) domain AMD18_RS03805 PF13533 Biotin-lipoyl like AMD18_RS03815 PF01209 ubiE/COQ5 methyltransferase family AMD18_RS03820 PF03707 Bacterial signalling protein N terminal repeat AMD18_RS03820 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS03820 PF00563 EAL domain AMD18_RS03825 PF11838 ERAP1-like C-terminal domain AMD18_RS03825 PF01433 Peptidase family M1 domain AMD18_RS03845 PF13360 PQQ-like domain AMD18_RS03850 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD18_RS03865 PF00107 Zinc-binding dehydrogenase AMD18_RS03865 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS03875 PF00158 Sigma-54 interaction domain AMD18_RS03875 PF02954 Bacterial regulatory protein, Fis family AMD18_RS03875 PF01590 GAF domain AMD18_RS03880 PF00294 pfkB family carbohydrate kinase AMD18_RS03890 PF04085 rod shape-determining protein MreC AMD18_RS03900 PF00905 Penicillin binding protein transpeptidase domain AMD18_RS03900 PF03717 Penicillin-binding Protein dimerisation domain AMD18_RS03905 PF01098 Cell cycle protein AMD18_RS03910 PF00295 Glycosyl hydrolases family 28 AMD18_RS03915 PF13406 Transglycosylase SLT domain AMD18_RS03920 PF03330 Lytic transglycolase AMD18_RS03920 PF05036 Sporulation related domain AMD18_RS03930 PF00768 D-alanyl-D-alanine carboxypeptidase AMD18_RS03930 PF07943 Penicillin-binding protein 5, C-terminal domain AMD18_RS03940 PF04359 Protein of unknown function (DUF493) AMD18_RS03945 PF03099 Biotin/lipoate A/B protein ligase family AMD18_RS03950 PF04055 Radical SAM superfamily AMD18_RS03950 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMD18_RS03955 PF00595 PDZ domain AMD18_RS03955 PF03572 Peptidase family S41 AMD18_RS03955 PF17804 Tail specific protease N-terminal domain AMD18_RS03955 PF11818 C-terminal domain of tail specific protease (DUF3340) AMD18_RS03965 PF03466 LysR substrate binding domain AMD18_RS03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS03975 PF00293 NUDIX domain AMD18_RS03975 PF01467 Cytidylyltransferase-like AMD18_RS04010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD18_RS04010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMD18_RS04015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD18_RS04015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD18_RS04020 PF04972 BON domain AMD18_RS04025 PF01590 GAF domain AMD18_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS04025 PF00360 Phytochrome region AMD18_RS04025 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS04025 PF08446 PAS fold AMD18_RS04030 PF00072 Response regulator receiver domain AMD18_RS04035 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS04040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD18_RS04085 PF03958 Bacterial type II/III secretion system short domain AMD18_RS04085 PF00263 Bacterial type II and III secretion system protein AMD18_RS04090 PF00437 Type II/IV secretion system protein AMD18_RS04095 PF00482 Type II secretion system (T2SS), protein F AMD18_RS04100 PF08334 Type II secretion system (T2SS), protein G AMD18_RS04100 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS04105 PF12019 Type II transport protein GspH AMD18_RS04105 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS04110 PF02501 Type II secretion system (T2SS), protein I AMD18_RS04110 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS04115 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS04115 PF11612 Type II secretion system (T2SS), protein J AMD18_RS04120 PF03934 Type II secretion system (T2SS), protein K AMD18_RS04160 PF00392 Bacterial regulatory proteins, gntR family AMD18_RS04160 PF07702 UTRA domain AMD18_RS04165 PF07690 Major Facilitator Superfamily AMD18_RS04170 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS04175 PF01380 SIS domain AMD18_RS04180 PF01979 Amidohydrolase family AMD18_RS04190 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD18_RS04190 PF01743 Poly A polymerase head domain AMD18_RS04190 PF01966 HD domain AMD18_RS04195 PF05199 GMC oxidoreductase AMD18_RS04195 PF00732 GMC oxidoreductase AMD18_RS04200 PF00171 Aldehyde dehydrogenase family AMD18_RS04205 PF02028 BCCT, betaine/carnitine/choline family transporter AMD18_RS04215 PF01323 DSBA-like thioredoxin domain AMD18_RS04225 PF00034 Cytochrome c AMD18_RS04230 PF01926 50S ribosome-binding GTPase AMD18_RS04235 PF00753 Metallo-beta-lactamase superfamily AMD18_RS04235 PF10996 Beta-Casp domain AMD18_RS04235 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMD18_RS04245 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMD18_RS04255 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS04255 PF00072 Response regulator receiver domain AMD18_RS04270 PF02583 Metal-sensitive transcriptional repressor AMD18_RS04275 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS04275 PF00107 Zinc-binding dehydrogenase AMD18_RS04280 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMD18_RS04285 PF00756 Putative esterase AMD18_RS04295 PF00392 Bacterial regulatory proteins, gntR family AMD18_RS04295 PF00155 Aminotransferase class I and II AMD18_RS04300 PF02567 Phenazine biosynthesis-like protein AMD18_RS04305 PF00892 EamA-like transporter family AMD18_RS04315 PF12848 ABC transporter AMD18_RS04315 PF00005 ABC transporter AMD18_RS04325 PF00464 Serine hydroxymethyltransferase AMD18_RS04330 PF03477 ATP cone domain AMD18_RS04340 PF01872 RibD C-terminal domain AMD18_RS04340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD18_RS04350 PF00677 Lumazine binding domain AMD18_RS04355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD18_RS04355 PF00925 GTP cyclohydrolase II AMD18_RS04360 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD18_RS04365 PF01029 NusB family AMD18_RS04370 PF02769 AIR synthase related protein, C-terminal domain AMD18_RS04370 PF00586 AIR synthase related protein, N-terminal domain AMD18_RS04390 PF03814 Potassium-transporting ATPase A subunit AMD18_RS04400 PF02669 K+-transporting ATPase, c chain AMD18_RS04405 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD18_RS04405 PF13492 GAF domain AMD18_RS04405 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS04405 PF13493 Domain of unknown function (DUF4118) AMD18_RS04410 PF00072 Response regulator receiver domain AMD18_RS04410 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS04425 PF02913 FAD linked oxidases, C-terminal domain AMD18_RS04425 PF01565 FAD binding domain AMD18_RS04430 PF04307 LexA-binding, inner membrane-associated putative hydrolase AMD18_RS04435 PF02021 Uncharacterised protein family UPF0102 AMD18_RS04445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD18_RS04460 PF02381 MraZ protein, putative antitoxin-like AMD18_RS04465 PF01795 MraW methylase family AMD18_RS04470 PF04999 Cell division protein FtsL AMD18_RS04475 PF00905 Penicillin binding protein transpeptidase domain AMD18_RS04475 PF03717 Penicillin-binding Protein dimerisation domain AMD18_RS04480 PF02875 Mur ligase family, glutamate ligase domain AMD18_RS04480 PF08245 Mur ligase middle domain AMD18_RS04480 PF01225 Mur ligase family, catalytic domain AMD18_RS04485 PF02875 Mur ligase family, glutamate ligase domain AMD18_RS04485 PF08245 Mur ligase middle domain AMD18_RS04485 PF01225 Mur ligase family, catalytic domain AMD18_RS04490 PF00953 Glycosyl transferase family 4 AMD18_RS04495 PF01098 Cell cycle protein AMD18_RS04500 PF04101 Glycosyltransferase family 28 C-terminal domain AMD18_RS04500 PF03033 Glycosyltransferase family 28 N-terminal domain AMD18_RS04505 PF01225 Mur ligase family, catalytic domain AMD18_RS04505 PF02875 Mur ligase family, glutamate ligase domain AMD18_RS04505 PF08245 Mur ligase middle domain AMD18_RS04510 PF07478 D-ala D-ala ligase C-terminus AMD18_RS04510 PF01820 D-ala D-ala ligase N-terminus AMD18_RS04515 PF03799 Cell division protein FtsQ AMD18_RS04515 PF08478 POTRA domain, FtsQ-type AMD18_RS04520 PF02491 SHS2 domain inserted in FTSA AMD18_RS04525 PF12327 FtsZ family, C-terminal domain AMD18_RS04525 PF00091 Tubulin/FtsZ family, GTPase domain AMD18_RS04530 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD18_RS04540 PF01551 Peptidase family M23 AMD18_RS04540 PF08525 Opacity-associated protein A N-terminal motif AMD18_RS04540 PF01476 LysM domain AMD18_RS04545 PF07517 SecA DEAD-like domain AMD18_RS04545 PF07516 SecA Wing and Scaffold domain AMD18_RS04545 PF02810 SEC-C motif AMD18_RS04545 PF01043 SecA preprotein cross-linking domain AMD18_RS04550 PF00293 NUDIX domain AMD18_RS04560 PF02219 Methylenetetrahydrofolate reductase AMD18_RS04570 PF00698 Acyl transferase domain AMD18_RS04570 PF08659 KR domain AMD18_RS04570 PF00550 Phosphopantetheine attachment site AMD18_RS04570 PF14765 Polyketide synthase dehydratase AMD18_RS04570 PF16197 Ketoacyl-synthetase C-terminal extension AMD18_RS04570 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD18_RS04570 PF00107 Zinc-binding dehydrogenase AMD18_RS04570 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD18_RS04570 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS04575 PF00082 Subtilase family AMD18_RS04575 PF09286 Pro-kumamolisin, activation domain AMD18_RS04585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD18_RS04590 PF00128 Alpha amylase, catalytic domain AMD18_RS04620 PF13649 Methyltransferase domain AMD18_RS04625 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD18_RS04625 PF05221 S-adenosyl-L-homocysteine hydrolase AMD18_RS04635 PF00311 Phosphoenolpyruvate carboxylase AMD18_RS04665 PF00328 Histidine phosphatase superfamily (branch 2) AMD18_RS04670 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD18_RS04670 PF02772 S-adenosylmethionine synthetase, central domain AMD18_RS04670 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD18_RS04680 PF13649 Methyltransferase domain AMD18_RS04685 PF01207 Dihydrouridine synthase (Dus) AMD18_RS04695 PF00294 pfkB family carbohydrate kinase AMD18_RS04700 PF07662 Na+ dependent nucleoside transporter C-terminus AMD18_RS04700 PF07670 Nucleoside recognition AMD18_RS04700 PF01773 Na+ dependent nucleoside transporter N-terminus AMD18_RS04705 PF00248 Aldo/keto reductase family AMD18_RS04715 PF00593 TonB dependent receptor AMD18_RS04715 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS04735 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS04740 PF00005 ABC transporter AMD18_RS04750 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD18_RS04760 PF00005 ABC transporter AMD18_RS04765 PF13472 GDSL-like Lipase/Acylhydrolase family AMD18_RS04770 PF00072 Response regulator receiver domain AMD18_RS04770 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS04775 PF08521 Two-component sensor kinase N-terminal AMD18_RS04775 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS04785 PF01219 Prokaryotic diacylglycerol kinase AMD18_RS04805 PF01790 Prolipoprotein diacylglyceryl transferase AMD18_RS04810 PF00303 Thymidylate synthase AMD18_RS04820 PF00186 Dihydrofolate reductase AMD18_RS04825 PF00158 Sigma-54 interaction domain AMD18_RS04830 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD18_RS04830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD18_RS04835 PF00005 ABC transporter AMD18_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS04850 PF00296 Luciferase-like monooxygenase AMD18_RS04855 PF03358 NADPH-dependent FMN reductase AMD18_RS04875 PF00296 Luciferase-like monooxygenase AMD18_RS04880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD18_RS04885 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS04890 PF12911 N-terminal TM domain of oligopeptide transport permease C AMD18_RS04890 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS04895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD18_RS04895 PF00005 ABC transporter AMD18_RS04900 PF00149 Calcineurin-like phosphoesterase AMD18_RS04905 PF04379 ApaG domain AMD18_RS04910 PF00398 Ribosomal RNA adenine dimethylase AMD18_RS04915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD18_RS04920 PF00639 PPIC-type PPIASE domain AMD18_RS04920 PF09312 SurA N-terminal domain AMD18_RS04925 PF04453 LPS transport system D AMD18_RS04925 PF03968 OstA-like protein AMD18_RS04935 PF00850 Histone deacetylase domain AMD18_RS04940 PF01923 Cobalamin adenosyltransferase AMD18_RS04950 PF01494 FAD binding domain AMD18_RS04955 PF01494 FAD binding domain AMD18_RS04975 PF07729 FCD domain AMD18_RS04975 PF00392 Bacterial regulatory proteins, gntR family AMD18_RS04980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD18_RS04985 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD18_RS04985 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AMD18_RS04990 PF03466 LysR substrate binding domain AMD18_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS04995 PF13193 AMP-binding enzyme C-terminal domain AMD18_RS04995 PF00501 AMP-binding enzyme AMD18_RS05000 PF00171 Aldehyde dehydrogenase family AMD18_RS05005 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS05025 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD18_RS05030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD18_RS05030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD18_RS05035 PF18125 RlmM ferredoxin-like domain AMD18_RS05035 PF01728 FtsJ-like methyltransferase AMD18_RS05060 PF00892 EamA-like transporter family AMD18_RS05070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD18_RS05070 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD18_RS05085 PF00072 Response regulator receiver domain AMD18_RS05085 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS05090 PF01627 Hpt domain AMD18_RS05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS05090 PF00672 HAMP domain AMD18_RS05090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD18_RS05090 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS05090 PF00072 Response regulator receiver domain AMD18_RS05095 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS05095 PF00072 Response regulator receiver domain AMD18_RS05105 PF01625 Peptide methionine sulfoxide reductase AMD18_RS05115 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMD18_RS05120 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD18_RS05120 PF14760 Rnk N-terminus AMD18_RS05125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS05125 PF03466 LysR substrate binding domain AMD18_RS05130 PF13192 Thioredoxin domain AMD18_RS05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS05135 PF00578 AhpC/TSA family AMD18_RS05135 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD18_RS05140 PF05175 Methyltransferase small domain AMD18_RS05140 PF17827 PrmC N-terminal domain AMD18_RS05145 PF00561 alpha/beta hydrolase fold AMD18_RS05155 PF00293 NUDIX domain AMD18_RS05160 PF00476 DNA polymerase family A AMD18_RS05160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD18_RS05160 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD18_RS05160 PF01612 3'-5' exonuclease AMD18_RS05190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD18_RS05190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD18_RS05190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD18_RS05215 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD18_RS05220 PF02233 NAD(P) transhydrogenase beta subunit AMD18_RS05235 PF01063 Amino-transferase class IV AMD18_RS05240 PF04151 Bacterial pre-peptidase C-terminal domain AMD18_RS05240 PF00082 Subtilase family AMD18_RS05245 PF00082 Subtilase family AMD18_RS05245 PF04151 Bacterial pre-peptidase C-terminal domain AMD18_RS05250 PF00082 Subtilase family AMD18_RS05250 PF04151 Bacterial pre-peptidase C-terminal domain AMD18_RS05255 PF04073 Aminoacyl-tRNA editing domain AMD18_RS05275 PF03358 NADPH-dependent FMN reductase AMD18_RS05280 PF03631 Virulence factor BrkB AMD18_RS05285 PF08534 Redoxin AMD18_RS05290 PF00708 Acylphosphatase AMD18_RS05300 PF03976 Polyphosphate kinase 2 (PPK2) AMD18_RS05305 PF00994 Probable molybdopterin binding domain AMD18_RS05315 PF03462 PCRF domain AMD18_RS05315 PF00472 RF-1 domain AMD18_RS05320 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD18_RS05320 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD18_RS05320 PF01488 Shikimate / quinate 5-dehydrogenase AMD18_RS05330 PF03550 Outer membrane lipoprotein LolB AMD18_RS05335 PF00288 GHMP kinases N terminal domain AMD18_RS05335 PF08544 GHMP kinases C terminal AMD18_RS05345 PF14572 Phosphoribosyl synthetase-associated domain AMD18_RS05345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD18_RS05350 PF01386 Ribosomal L25p family AMD18_RS05350 PF14693 Ribosomal protein TL5, C-terminal domain AMD18_RS05355 PF01195 Peptidyl-tRNA hydrolase AMD18_RS05360 PF01926 50S ribosome-binding GTPase AMD18_RS05360 PF06071 Protein of unknown function (DUF933) AMD18_RS05380 PF00009 Elongation factor Tu GTP binding domain AMD18_RS05380 PF03144 Elongation factor Tu domain 2 AMD18_RS05380 PF03143 Elongation factor Tu C-terminal domain AMD18_RS05390 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD18_RS05395 PF02357 Transcription termination factor nusG AMD18_RS05395 PF00467 KOW motif AMD18_RS05400 PF03946 Ribosomal protein L11, N-terminal domain AMD18_RS05400 PF00298 Ribosomal protein L11, RNA binding domain AMD18_RS05405 PF00687 Ribosomal protein L1p/L10e family AMD18_RS05410 PF00466 Ribosomal protein L10 AMD18_RS05415 PF16320 Ribosomal protein L7/L12 dimerisation domain AMD18_RS05415 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD18_RS05420 PF04561 RNA polymerase Rpb2, domain 2 AMD18_RS05420 PF10385 RNA polymerase beta subunit external 1 domain AMD18_RS05420 PF00562 RNA polymerase Rpb2, domain 6 AMD18_RS05420 PF04560 RNA polymerase Rpb2, domain 7 AMD18_RS05420 PF04563 RNA polymerase beta subunit AMD18_RS05420 PF04565 RNA polymerase Rpb2, domain 3 AMD18_RS05425 PF04998 RNA polymerase Rpb1, domain 5 AMD18_RS05425 PF04983 RNA polymerase Rpb1, domain 3 AMD18_RS05425 PF00623 RNA polymerase Rpb1, domain 2 AMD18_RS05425 PF04997 RNA polymerase Rpb1, domain 1 AMD18_RS05425 PF05000 RNA polymerase Rpb1, domain 4 AMD18_RS05430 PF00164 Ribosomal protein S12/S23 AMD18_RS05435 PF00177 Ribosomal protein S7p/S5e AMD18_RS05440 PF00679 Elongation factor G C-terminus AMD18_RS05440 PF14492 Elongation Factor G, domain II AMD18_RS05440 PF03764 Elongation factor G, domain IV AMD18_RS05440 PF00009 Elongation factor Tu GTP binding domain AMD18_RS05440 PF03144 Elongation factor Tu domain 2 AMD18_RS05445 PF00009 Elongation factor Tu GTP binding domain AMD18_RS05445 PF03143 Elongation factor Tu C-terminal domain AMD18_RS05445 PF03144 Elongation factor Tu domain 2 AMD18_RS05450 PF00338 Ribosomal protein S10p/S20e AMD18_RS05455 PF00297 Ribosomal protein L3 AMD18_RS05460 PF00573 Ribosomal protein L4/L1 family AMD18_RS05465 PF00276 Ribosomal protein L23 AMD18_RS05470 PF03947 Ribosomal Proteins L2, C-terminal domain AMD18_RS05470 PF00181 Ribosomal Proteins L2, RNA binding domain AMD18_RS05475 PF00203 Ribosomal protein S19 AMD18_RS05480 PF00237 Ribosomal protein L22p/L17e AMD18_RS05485 PF07650 KH domain AMD18_RS05485 PF00189 Ribosomal protein S3, C-terminal domain AMD18_RS05490 PF00252 Ribosomal protein L16p/L10e AMD18_RS05495 PF00831 Ribosomal L29 protein AMD18_RS05500 PF00366 Ribosomal protein S17 AMD18_RS05505 PF00238 Ribosomal protein L14p/L23e AMD18_RS05510 PF00467 KOW motif AMD18_RS05510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMD18_RS05515 PF00281 Ribosomal protein L5 AMD18_RS05515 PF00673 ribosomal L5P family C-terminus AMD18_RS05520 PF00253 Ribosomal protein S14p/S29e AMD18_RS05525 PF00410 Ribosomal protein S8 AMD18_RS05530 PF00347 Ribosomal protein L6 AMD18_RS05535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMD18_RS05540 PF00333 Ribosomal protein S5, N-terminal domain AMD18_RS05540 PF03719 Ribosomal protein S5, C-terminal domain AMD18_RS05545 PF00327 Ribosomal protein L30p/L7e AMD18_RS05550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMD18_RS05555 PF00344 SecY translocase AMD18_RS05560 PF00416 Ribosomal protein S13/S18 AMD18_RS05565 PF00411 Ribosomal protein S11 AMD18_RS05570 PF01479 S4 domain AMD18_RS05570 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD18_RS05575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD18_RS05575 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD18_RS05575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD18_RS05580 PF01196 Ribosomal protein L17 AMD18_RS05585 PF02600 Disulfide bond formation protein DsbB AMD18_RS05600 PF01474 Class-II DAHP synthetase family AMD18_RS05610 PF01425 Amidase AMD18_RS05620 PF00009 Elongation factor Tu GTP binding domain AMD18_RS05620 PF00679 Elongation factor G C-terminus AMD18_RS05620 PF03144 Elongation factor Tu domain 2 AMD18_RS05625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD18_RS05630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD18_RS05630 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD18_RS05635 PF00043 Glutathione S-transferase, C-terminal domain AMD18_RS05635 PF02798 Glutathione S-transferase, N-terminal domain AMD18_RS05645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD18_RS05645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS05650 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS05650 PF00107 Zinc-binding dehydrogenase AMD18_RS05655 PF05736 OprF membrane domain AMD18_RS05655 PF00691 OmpA family AMD18_RS05665 PF00849 RNA pseudouridylate synthase AMD18_RS05675 PF00155 Aminotransferase class I and II AMD18_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS05690 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS05695 PF00005 ABC transporter AMD18_RS05695 PF12857 TOBE-like domain AMD18_RS05695 PF17850 CysA C-terminal regulatory domain AMD18_RS05705 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS05705 PF00107 Zinc-binding dehydrogenase AMD18_RS05720 PF04185 Phosphoesterase family AMD18_RS05720 PF05506 Domain of unknown function (DUF756) AMD18_RS05725 PF10459 Peptidase S46 AMD18_RS05730 PF10459 Peptidase S46 AMD18_RS05735 PF00300 Histidine phosphatase superfamily (branch 1) AMD18_RS05740 PF08245 Mur ligase middle domain AMD18_RS05740 PF02875 Mur ligase family, glutamate ligase domain AMD18_RS05755 PF00156 Phosphoribosyl transferase domain AMD18_RS05760 PF04305 Protein of unknown function (DUF455) AMD18_RS05780 PF00149 Calcineurin-like phosphoesterase AMD18_RS05785 PF01569 PAP2 superfamily AMD18_RS05790 PF13439 Glycosyltransferase Family 4 AMD18_RS05790 PF00534 Glycosyl transferases group 1 AMD18_RS05795 PF02541 Ppx/GppA phosphatase family AMD18_RS05800 PF17941 Polyphosphate kinase C-terminal domain 1 AMD18_RS05800 PF13090 Polyphosphate kinase C-terminal domain 2 AMD18_RS05800 PF02503 Polyphosphate kinase middle domain AMD18_RS05800 PF13089 Polyphosphate kinase N-terminal domain AMD18_RS05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS05805 PF00989 PAS fold AMD18_RS05805 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS05805 PF11808 Phosphate regulon sensor protein PhoR AMD18_RS05810 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS05810 PF00072 Response regulator receiver domain AMD18_RS05815 PF01435 Peptidase family M48 AMD18_RS05815 PF13181 Tetratricopeptide repeat AMD18_RS05820 PF00462 Glutaredoxin AMD18_RS05830 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD18_RS05960 PF13276 HTH-like domain AMD18_RS05960 PF00665 Integrase core domain AMD18_RS05960 PF13333 Integrase core domain AMD18_RS05975 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS05975 PF00989 PAS fold AMD18_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS05985 PF05697 Bacterial trigger factor protein (TF) AMD18_RS05985 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD18_RS05990 PF00574 Clp protease AMD18_RS05995 PF07724 AAA domain (Cdc48 subfamily) AMD18_RS05995 PF06689 ClpX C4-type zinc finger AMD18_RS05995 PF10431 C-terminal, D2-small domain, of ClpB protein AMD18_RS06000 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMD18_RS06000 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD18_RS06000 PF00004 ATPase family associated with various cellular activities (AAA) AMD18_RS06005 PF00216 Bacterial DNA-binding protein AMD18_RS06030 PF05257 CHAP domain AMD18_RS06030 PF01476 LysM domain AMD18_RS06035 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD18_RS06035 PF00753 Metallo-beta-lactamase superfamily AMD18_RS06045 PF00075 RNase H AMD18_RS06050 PF00929 Exonuclease AMD18_RS06070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMD18_RS06080 PF12706 Beta-lactamase superfamily domain AMD18_RS06080 PF00753 Metallo-beta-lactamase superfamily AMD18_RS06085 PF06463 Molybdenum Cofactor Synthesis C AMD18_RS06085 PF04055 Radical SAM superfamily AMD18_RS06095 PF01967 MoaC family AMD18_RS06100 PF02597 ThiS family AMD18_RS06105 PF02391 MoaE protein AMD18_RS06155 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD18_RS06155 PF12169 DNA polymerase III subunits gamma and tau domain III AMD18_RS06155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMD18_RS06160 PF02575 YbaB/EbfC DNA-binding family AMD18_RS06165 PF02132 RecR protein AMD18_RS06165 PF13662 Toprim domain AMD18_RS06170 PF01230 HIT domain AMD18_RS06180 PF01841 Transglutaminase-like superfamily AMD18_RS06180 PF13559 Domain of unknown function (DUF4129) AMD18_RS06180 PF11992 Domain of unknown function (DUF3488) AMD18_RS06190 PF17863 AAA lid domain AMD18_RS06190 PF07726 ATPase family associated with various cellular activities (AAA) AMD18_RS06210 PF02545 Maf-like protein AMD18_RS06215 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMD18_RS06220 PF01783 Ribosomal L32p protein family AMD18_RS06225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD18_RS06225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD18_RS06235 PF00698 Acyl transferase domain AMD18_RS06245 PF00550 Phosphopantetheine attachment site AMD18_RS06250 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD18_RS06250 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD18_RS06255 PF04715 Anthranilate synthase component I, N terminal region AMD18_RS06255 PF00425 chorismate binding enzyme AMD18_RS06260 PF02618 YceG-like family AMD18_RS06265 PF09115 DNA polymerase III, delta subunit, C terminal AMD18_RS06285 PF00158 Sigma-54 interaction domain AMD18_RS06285 PF06506 Propionate catabolism activator AMD18_RS06285 PF02954 Bacterial regulatory protein, Fis family AMD18_RS06295 PF00285 Citrate synthase, C-terminal domain AMD18_RS06300 PF00330 Aconitase family (aconitate hydratase) AMD18_RS06300 PF00694 Aconitase C-terminal domain AMD18_RS06305 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AMD18_RS06310 PF04303 PrpF protein AMD18_RS06315 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS06315 PF00593 TonB dependent receptor AMD18_RS06325 PF17962 Bacterial macroglobulin domain 6 AMD18_RS06325 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AMD18_RS06325 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AMD18_RS06325 PF01835 MG2 domain AMD18_RS06325 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AMD18_RS06325 PF07703 Alpha-2-macroglobulin bait region domain AMD18_RS06325 PF00207 Alpha-2-macroglobulin family AMD18_RS06325 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AMD18_RS06340 PF06832 Penicillin-Binding Protein C-terminus Family AMD18_RS06340 PF00905 Penicillin binding protein transpeptidase domain AMD18_RS06340 PF00912 Transglycosylase AMD18_RS06350 PF08534 Redoxin AMD18_RS06360 PF01556 DnaJ C terminal domain AMD18_RS06360 PF00226 DnaJ domain AMD18_RS06365 PF00072 Response regulator receiver domain AMD18_RS06370 PF12221 Bacterial membrane protein N terminal AMD18_RS06370 PF01145 SPFH domain / Band 7 family AMD18_RS06375 PF01145 SPFH domain / Band 7 family AMD18_RS06385 PF00709 Adenylosuccinate synthetase AMD18_RS06390 PF01433 Peptidase family M1 domain AMD18_RS06390 PF11838 ERAP1-like C-terminal domain AMD18_RS06405 PF00440 Bacterial regulatory proteins, tetR family AMD18_RS06470 PF13456 Reverse transcriptase-like AMD18_RS06470 PF00300 Histidine phosphatase superfamily (branch 1) AMD18_RS06475 PF01256 Carbohydrate kinase AMD18_RS06485 PF00723 Glycosyl hydrolases family 15 AMD18_RS06495 PF07971 Glycosyl hydrolase family 92 AMD18_RS06495 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD18_RS06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS06535 PF17755 UvrA DNA-binding domain AMD18_RS06540 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD18_RS06540 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD18_RS06545 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD18_RS06545 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD18_RS06550 PF01799 [2Fe-2S] binding domain AMD18_RS06550 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD18_RS06585 PF01726 LexA DNA binding domain AMD18_RS06585 PF00717 Peptidase S24-like AMD18_RS06600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD18_RS06600 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD18_RS06600 PF02811 PHP domain AMD18_RS06600 PF14579 Helix-hairpin-helix motif AMD18_RS06605 PF00326 Prolyl oligopeptidase family AMD18_RS06615 PF03169 OPT oligopeptide transporter protein AMD18_RS06630 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD18_RS06630 PF07676 WD40-like Beta Propeller Repeat AMD18_RS06630 PF00326 Prolyl oligopeptidase family AMD18_RS06645 PF02311 AraC-like ligand binding domain AMD18_RS06645 PF12833 Helix-turn-helix domain AMD18_RS06660 PF18011 C-terminal domain found in long catalases AMD18_RS06660 PF06628 Catalase-related immune-responsive AMD18_RS06660 PF00199 Catalase AMD18_RS06665 PF00248 Aldo/keto reductase family AMD18_RS06670 PF00135 Carboxylesterase family AMD18_RS06675 PF02347 Glycine cleavage system P-protein AMD18_RS06680 PF07690 Major Facilitator Superfamily AMD18_RS06695 PF00884 Sulfatase AMD18_RS06695 PF08019 Phosphoethanolamine transferase EptA/EptB AMD18_RS06710 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS06710 PF00072 Response regulator receiver domain AMD18_RS06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS06715 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS06715 PF08521 Two-component sensor kinase N-terminal AMD18_RS06725 PF03776 Septum formation topological specificity factor MinE AMD18_RS06730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD18_RS06735 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD18_RS06735 PF05209 Septum formation inhibitor MinC, N-terminal domain AMD18_RS06750 PF07730 Histidine kinase AMD18_RS06755 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS06755 PF00072 Response regulator receiver domain AMD18_RS06770 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD18_RS06795 PF02222 ATP-grasp domain AMD18_RS06805 PF04376 Arginine-tRNA-protein transferase, N terminus AMD18_RS06805 PF04377 Arginine-tRNA-protein transferase, C terminus AMD18_RS06830 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS06845 PF17760 UvrA interaction domain AMD18_RS06845 PF00005 ABC transporter AMD18_RS06845 PF17755 UvrA DNA-binding domain AMD18_RS06850 PF00829 Ribosomal prokaryotic L21 protein AMD18_RS06855 PF01016 Ribosomal L27 protein AMD18_RS06860 PF01926 50S ribosome-binding GTPase AMD18_RS06860 PF01018 GTP1/OBG AMD18_RS06865 PF01649 Ribosomal protein S20 AMD18_RS06870 PF03023 Lipid II flippase MurJ AMD18_RS06875 PF06574 FAD synthetase AMD18_RS06875 PF01687 Riboflavin kinase AMD18_RS06880 PF06827 Zinc finger found in FPG and IleRS AMD18_RS06880 PF08264 Anticodon-binding domain of tRNA AMD18_RS06880 PF00133 tRNA synthetases class I (I, L, M and V) AMD18_RS06885 PF01252 Signal peptidase (SPase) II AMD18_RS06890 PF02401 LytB protein AMD18_RS06900 PF06481 COX Aromatic Rich Motif AMD18_RS06900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD18_RS06905 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD18_RS06910 PF00510 Cytochrome c oxidase subunit III AMD18_RS06915 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMD18_RS06925 PF18073 Rubredoxin metal binding domain AMD18_RS06930 PF05656 Protein of unknown function (DUF805) AMD18_RS06940 PF12833 Helix-turn-helix domain AMD18_RS06945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS06945 PF00183 Hsp90 protein AMD18_RS06955 PF01740 STAS domain AMD18_RS06955 PF08678 Rsbr N terminal AMD18_RS06960 PF01740 STAS domain AMD18_RS06965 PF13581 Histidine kinase-like ATPase domain AMD18_RS06975 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD18_RS06975 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS06975 PF00672 HAMP domain AMD18_RS06975 PF00072 Response regulator receiver domain AMD18_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS06975 PF01627 Hpt domain AMD18_RS06980 PF00072 Response regulator receiver domain AMD18_RS06980 PF08448 PAS fold AMD18_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS06980 PF13188 PAS domain AMD18_RS06980 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS06985 PF04616 Glycosyl hydrolases family 43 AMD18_RS06985 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD18_RS06990 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS06990 PF00593 TonB dependent receptor AMD18_RS06995 PF00085 Thioredoxin AMD18_RS07000 PF07237 Protein of unknown function (DUF1428) AMD18_RS07005 PF13492 GAF domain AMD18_RS07005 PF13493 Domain of unknown function (DUF4118) AMD18_RS07005 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD18_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS07005 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS07010 PF01339 CheB methylesterase AMD18_RS07015 PF01739 CheR methyltransferase, SAM binding domain AMD18_RS07015 PF03705 CheR methyltransferase, all-alpha domain AMD18_RS07020 PF00072 Response regulator receiver domain AMD18_RS07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS07020 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS07020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD18_RS07020 PF00672 HAMP domain AMD18_RS07020 PF01627 Hpt domain AMD18_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS07025 PF13426 PAS domain AMD18_RS07025 PF00072 Response regulator receiver domain AMD18_RS07030 PF00072 Response regulator receiver domain AMD18_RS07035 PF00722 Glycosyl hydrolases family 16 AMD18_RS07040 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMD18_RS07050 PF01263 Aldose 1-epimerase AMD18_RS07055 PF01578 Cytochrome C assembly protein AMD18_RS07060 PF02978 Signal peptide binding domain AMD18_RS07060 PF02881 SRP54-type protein, helical bundle domain AMD18_RS07060 PF00448 SRP54-type protein, GTPase domain AMD18_RS07065 PF03060 Nitronate monooxygenase AMD18_RS07070 PF01063 Amino-transferase class IV AMD18_RS07075 PF00886 Ribosomal protein S16 AMD18_RS07080 PF01782 RimM N-terminal domain AMD18_RS07080 PF05239 PRC-barrel domain AMD18_RS07085 PF01746 tRNA (Guanine-1)-methyltransferase AMD18_RS07090 PF01245 Ribosomal protein L19 AMD18_RS07115 PF01479 S4 domain AMD18_RS07120 PF00141 Peroxidase AMD18_RS07130 PF05192 MutS domain III AMD18_RS07130 PF00488 MutS domain V AMD18_RS07130 PF05188 MutS domain II AMD18_RS07130 PF01624 MutS domain I AMD18_RS07130 PF05190 MutS family domain IV AMD18_RS07140 PF03527 RHS protein AMD18_RS07140 PF05593 RHS Repeat AMD18_RS07160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD18_RS07160 PF00703 Glycosyl hydrolases family 2 AMD18_RS07160 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD18_RS07160 PF16355 Domain of unknown function (DUF4982) AMD18_RS07160 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD18_RS07165 PF07745 Glycosyl hydrolase family 53 AMD18_RS07175 PF06114 IrrE N-terminal-like domain AMD18_RS07175 PF01381 Helix-turn-helix AMD18_RS07175 PF09856 Predicted transcriptional regulator (DUF2083) AMD18_RS07180 PF00171 Aldehyde dehydrogenase family AMD18_RS07185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD18_RS07185 PF02770 Acyl-CoA dehydrogenase, middle domain AMD18_RS07185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD18_RS07190 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS07195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD18_RS07195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD18_RS07195 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS07200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD18_RS07200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD18_RS07205 PF01545 Cation efflux family AMD18_RS07210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD18_RS07210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD18_RS07210 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS07215 PF08281 Sigma-70, region 4 AMD18_RS07215 PF04542 Sigma-70 region 2 AMD18_RS07225 PF13180 PDZ domain AMD18_RS07230 PF00679 Elongation factor G C-terminus AMD18_RS07230 PF00009 Elongation factor Tu GTP binding domain AMD18_RS07230 PF03144 Elongation factor Tu domain 2 AMD18_RS07230 PF06421 GTP-binding protein LepA C-terminus AMD18_RS07235 PF10502 Signal peptidase, peptidase S26 AMD18_RS07245 PF00035 Double-stranded RNA binding motif AMD18_RS07245 PF14622 Ribonuclease-III-like AMD18_RS07250 PF07650 KH domain AMD18_RS07250 PF01926 50S ribosome-binding GTPase AMD18_RS07255 PF11967 Recombination protein O N terminal AMD18_RS07255 PF02565 Recombination protein O C terminal AMD18_RS07265 PF05958 tRNA (Uracil-5-)-methyltransferase AMD18_RS07270 PF01928 CYTH domain AMD18_RS07275 PF01323 DSBA-like thioredoxin domain AMD18_RS07280 PF01593 Flavin containing amine oxidoreductase AMD18_RS07285 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMD18_RS07290 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD18_RS07295 PF00156 Phosphoribosyl transferase domain AMD18_RS07300 PF01048 Phosphorylase superfamily AMD18_RS07305 PF00313 'Cold-shock' DNA-binding domain AMD18_RS07310 PF01494 FAD binding domain AMD18_RS07320 PF00270 DEAD/DEAH box helicase AMD18_RS07320 PF08494 DEAD/H associated AMD18_RS07320 PF00271 Helicase conserved C-terminal domain AMD18_RS07325 PF01068 ATP dependent DNA ligase domain AMD18_RS07325 PF04675 DNA ligase N terminus AMD18_RS07325 PF04679 ATP dependent DNA ligase C terminal region AMD18_RS07335 PF04679 ATP dependent DNA ligase C terminal region AMD18_RS07335 PF04675 DNA ligase N terminus AMD18_RS07335 PF01068 ATP dependent DNA ligase domain AMD18_RS07350 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS07350 PF00072 Response regulator receiver domain AMD18_RS07365 PF02803 Thiolase, C-terminal domain AMD18_RS07365 PF00108 Thiolase, N-terminal domain AMD18_RS07370 PF12951 Passenger-associated-transport-repeat AMD18_RS07370 PF00082 Subtilase family AMD18_RS07370 PF03797 Autotransporter beta-domain AMD18_RS07375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD18_RS07375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD18_RS07385 PF01863 Protein of unknown function DUF45 AMD18_RS07390 PF07043 Protein of unknown function (DUF1328) AMD18_RS07400 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD18_RS07425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD18_RS07435 PF08274 PhnA Zinc-Ribbon AMD18_RS07435 PF03831 PhnA domain AMD18_RS07440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD18_RS07445 PF07690 Major Facilitator Superfamily AMD18_RS07480 PF03706 Lysylphosphatidylglycerol synthase TM region AMD18_RS07480 PF09924 Uncharacterised conserved protein (DUF2156) AMD18_RS07490 PF01042 Endoribonuclease L-PSP AMD18_RS07535 PF04545 Sigma-70, region 4 AMD18_RS07535 PF04542 Sigma-70 region 2 AMD18_RS07555 PF04060 Putative Fe-S cluster AMD18_RS07565 PF09334 tRNA synthetases class I (M) AMD18_RS07565 PF01588 Putative tRNA binding domain AMD18_RS07580 PF13732 Domain of unknown function (DUF4162) AMD18_RS07580 PF00005 ABC transporter AMD18_RS07585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD18_RS07590 PF00324 Amino acid permease AMD18_RS07595 PF02574 Homocysteine S-methyltransferase AMD18_RS07605 PF02592 Putative vitamin uptake transporter AMD18_RS07625 PF03551 Transcriptional regulator PadR-like family AMD18_RS07645 PF03653 Uncharacterised protein family (UPF0093) AMD18_RS07660 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD18_RS07665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD18_RS07665 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD18_RS07665 PF01336 OB-fold nucleic acid binding domain AMD18_RS07665 PF14579 Helix-hairpin-helix motif AMD18_RS07665 PF02811 PHP domain AMD18_RS07670 PF01351 Ribonuclease HII AMD18_RS07675 PF02684 Lipid-A-disaccharide synthetase AMD18_RS07680 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD18_RS07680 PF00132 Bacterial transferase hexapeptide (six repeats) AMD18_RS07685 PF07977 FabA-like domain AMD18_RS07690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD18_RS07690 PF00132 Bacterial transferase hexapeptide (six repeats) AMD18_RS07700 PF01103 Surface antigen AMD18_RS07700 PF07244 Surface antigen variable number repeat AMD18_RS07705 PF17820 PDZ domain AMD18_RS07705 PF02163 Peptidase family M50 AMD18_RS07710 PF13288 DXP reductoisomerase C-terminal domain AMD18_RS07710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD18_RS07710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMD18_RS07720 PF01255 Putative undecaprenyl diphosphate synthase AMD18_RS07725 PF01765 Ribosome recycling factor AMD18_RS07730 PF00696 Amino acid kinase family AMD18_RS07735 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS07735 PF00072 Response regulator receiver domain AMD18_RS07740 PF00889 Elongation factor TS AMD18_RS07745 PF00318 Ribosomal protein S2 AMD18_RS07780 PF00557 Metallopeptidase family M24 AMD18_RS07785 PF01909 Nucleotidyltransferase domain AMD18_RS07785 PF08335 GlnD PII-uridylyltransferase AMD18_RS07785 PF01966 HD domain AMD18_RS07790 PF14602 Hexapeptide repeat of succinyl-transferase AMD18_RS07790 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD18_RS07790 PF00132 Bacterial transferase hexapeptide (six repeats) AMD18_RS07795 PF03960 ArsC family AMD18_RS07800 PF01546 Peptidase family M20/M25/M40 AMD18_RS07800 PF07687 Peptidase dimerisation domain AMD18_RS07805 PF13537 Glutamine amidotransferase domain AMD18_RS07805 PF00733 Asparagine synthase AMD18_RS07815 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS07815 PF00593 TonB dependent receptor AMD18_RS07830 PF00210 Ferritin-like domain AMD18_RS07835 PF05724 Thiopurine S-methyltransferase (TPMT) AMD18_RS07845 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD18_RS07845 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD18_RS07860 PF02321 Outer membrane efflux protein AMD18_RS07865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS07865 PF00529 HlyD membrane-fusion protein of T1SS AMD18_RS07870 PF07690 Major Facilitator Superfamily AMD18_RS07880 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD18_RS07880 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD18_RS07880 PF14310 Fibronectin type III-like domain AMD18_RS07890 PF00854 POT family AMD18_RS07915 PF12802 MarR family AMD18_RS07920 PF01432 Peptidase family M3 AMD18_RS07925 PF00255 Glutathione peroxidase AMD18_RS07930 PF00175 Oxidoreductase NAD-binding domain AMD18_RS07930 PF00970 Oxidoreductase FAD-binding domain AMD18_RS07935 PF00005 ABC transporter AMD18_RS07940 PF05683 Fumarase C-terminus AMD18_RS07940 PF05681 Fumarate hydratase (Fumerase) AMD18_RS07950 PF00484 Carbonic anhydrase AMD18_RS07955 PF02253 Phospholipase A1 AMD18_RS07965 PF00313 'Cold-shock' DNA-binding domain AMD18_RS07980 PF00899 ThiF family AMD18_RS07985 PF01026 TatD related DNase AMD18_RS08000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD18_RS08000 PF02770 Acyl-CoA dehydrogenase, middle domain AMD18_RS08000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD18_RS08010 PF02798 Glutathione S-transferase, N-terminal domain AMD18_RS08010 PF00043 Glutathione S-transferase, C-terminal domain AMD18_RS08020 PF13537 Glutamine amidotransferase domain AMD18_RS08020 PF00733 Asparagine synthase AMD18_RS08025 PF03358 NADPH-dependent FMN reductase AMD18_RS08030 PF00772 DnaB-like helicase N terminal domain AMD18_RS08030 PF03796 DnaB-like helicase C terminal domain AMD18_RS08035 PF03441 FAD binding domain of DNA photolyase AMD18_RS08035 PF00875 DNA photolyase AMD18_RS08040 PF05736 OprF membrane domain AMD18_RS08040 PF00691 OmpA family AMD18_RS08045 PF03466 LysR substrate binding domain AMD18_RS08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS08060 PF00529 HlyD membrane-fusion protein of T1SS AMD18_RS08060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS08065 PF00873 AcrB/AcrD/AcrF family AMD18_RS08070 PF00106 short chain dehydrogenase AMD18_RS08075 PF02321 Outer membrane efflux protein AMD18_RS08080 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS08090 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS08155 PF01527 Transposase AMD18_RS08190 PF00082 Subtilase family AMD18_RS08195 PF01668 SmpB protein AMD18_RS08200 PF03364 Polyketide cyclase / dehydrase and lipid transport AMD18_RS08205 PF03658 RnfH family Ubiquitin AMD18_RS08210 PF04355 SmpA / OmlA family AMD18_RS08215 PF01475 Ferric uptake regulator family AMD18_RS08220 PF02463 RecF/RecN/SMC N terminal domain AMD18_RS08225 PF01628 HrcA protein C terminal domain AMD18_RS08225 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD18_RS08230 PF01025 GrpE AMD18_RS08235 PF00012 Hsp70 protein AMD18_RS08240 PF00226 DnaJ domain AMD18_RS08240 PF01556 DnaJ C terminal domain AMD18_RS08240 PF00684 DnaJ central domain AMD18_RS08245 PF08543 Phosphomethylpyrimidine kinase AMD18_RS08270 PF00664 ABC transporter transmembrane region AMD18_RS08270 PF00005 ABC transporter AMD18_RS08270 PF03412 Peptidase C39 family AMD18_RS08275 PF03466 LysR substrate binding domain AMD18_RS08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS08280 PF00005 ABC transporter AMD18_RS08280 PF00664 ABC transporter transmembrane region AMD18_RS08285 PF01205 Uncharacterized protein family UPF0029 AMD18_RS08290 PF03641 Possible lysine decarboxylase AMD18_RS08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS08295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD18_RS08300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD18_RS08300 PF00364 Biotin-requiring enzyme AMD18_RS08300 PF02817 e3 binding domain AMD18_RS08305 PF00676 Dehydrogenase E1 component AMD18_RS08305 PF16870 2-oxoglutarate dehydrogenase C-terminal AMD18_RS08305 PF16078 2-oxoglutarate dehydrogenase N-terminus AMD18_RS08305 PF02779 Transketolase, pyrimidine binding domain AMD18_RS08315 PF08007 Cupin superfamily protein AMD18_RS08325 PF00206 Lyase AMD18_RS08325 PF08328 Adenylosuccinate lyase C-terminal AMD18_RS08335 PF03471 Transporter associated domain AMD18_RS08335 PF01595 Cyclin M transmembrane N-terminal domain AMD18_RS08335 PF00571 CBS domain AMD18_RS08340 PF00206 Lyase AMD18_RS08340 PF10415 Fumarase C C-terminus AMD18_RS08365 PF00005 ABC transporter AMD18_RS08370 PF00392 Bacterial regulatory proteins, gntR family AMD18_RS08375 PF00255 Glutathione peroxidase AMD18_RS08380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD18_RS08380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD18_RS08385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD18_RS08385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD18_RS08385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD18_RS08390 PF04102 SlyX AMD18_RS08405 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS08410 PF07690 Major Facilitator Superfamily AMD18_RS08415 PF00294 pfkB family carbohydrate kinase AMD18_RS08425 PF02310 B12 binding domain AMD18_RS08425 PF00809 Pterin binding enzyme AMD18_RS08425 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD18_RS08425 PF02607 B12 binding domain AMD18_RS08425 PF02574 Homocysteine S-methyltransferase AMD18_RS08430 PF00809 Pterin binding enzyme AMD18_RS08430 PF02574 Homocysteine S-methyltransferase AMD18_RS08435 PF01209 ubiE/COQ5 methyltransferase family AMD18_RS08440 PF02770 Acyl-CoA dehydrogenase, middle domain AMD18_RS08440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD18_RS08440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD18_RS08455 PF17876 Cold shock domain AMD18_RS08455 PF08461 Ribonuclease R winged-helix domain AMD18_RS08455 PF00575 S1 RNA binding domain AMD18_RS08455 PF08206 Ribonuclease B OB domain AMD18_RS08455 PF00773 RNB domain AMD18_RS08465 PF00588 SpoU rRNA Methylase family AMD18_RS08465 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD18_RS08470 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS08475 PF00929 Exonuclease AMD18_RS08485 PF01895 PhoU domain AMD18_RS08490 PF00005 ABC transporter AMD18_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS08505 PF12849 PBP superfamily domain AMD18_RS08510 PF12849 PBP superfamily domain AMD18_RS08525 PF00484 Carbonic anhydrase AMD18_RS08530 PF00916 Sulfate permease family AMD18_RS08530 PF01740 STAS domain AMD18_RS08535 PF10576 Iron-sulfur binding domain of endonuclease III AMD18_RS08535 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD18_RS08535 PF00633 Helix-hairpin-helix motif AMD18_RS08545 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS08550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD18_RS08550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD18_RS08555 PF00293 NUDIX domain AMD18_RS08560 PF00581 Rhodanese-like domain AMD18_RS08590 PF00005 ABC transporter AMD18_RS08590 PF12848 ABC transporter AMD18_RS08590 PF16326 ABC transporter C-terminal domain AMD18_RS08595 PF01170 Putative RNA methylase family UPF0020 AMD18_RS08595 PF02926 THUMP domain AMD18_RS08595 PF10672 S-adenosylmethionine-dependent methyltransferase AMD18_RS08600 PF01513 ATP-NAD kinase AMD18_RS08625 PF00929 Exonuclease AMD18_RS08625 PF08411 Exonuclease C-terminal AMD18_RS08630 PF01494 FAD binding domain AMD18_RS08635 PF00266 Aminotransferase class-V AMD18_RS08645 PF06052 3-hydroxyanthranilic acid dioxygenase AMD18_RS08650 PF00484 Carbonic anhydrase AMD18_RS08695 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS08695 PF00072 Response regulator receiver domain AMD18_RS08710 PF04299 Putative FMN-binding domain AMD18_RS08730 PF01336 OB-fold nucleic acid binding domain AMD18_RS08730 PF00152 tRNA synthetases class II (D, K and N) AMD18_RS08735 PF01521 Iron-sulphur cluster biosynthesis AMD18_RS08740 PF01250 Ribosomal protein S6 AMD18_RS08745 PF01084 Ribosomal protein S18 AMD18_RS08750 PF01281 Ribosomal protein L9, N-terminal domain AMD18_RS08750 PF03948 Ribosomal protein L9, C-terminal domain AMD18_RS08755 PF02463 RecF/RecN/SMC N terminal domain AMD18_RS08760 PF04354 ZipA, C-terminal FtsZ-binding domain AMD18_RS08770 PF00155 Aminotransferase class I and II AMD18_RS08775 PF01653 NAD-dependent DNA ligase adenylation domain AMD18_RS08775 PF12826 Helix-hairpin-helix motif AMD18_RS08775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD18_RS08775 PF03120 NAD-dependent DNA ligase OB-fold domain AMD18_RS08775 PF00533 BRCA1 C Terminus (BRCT) domain AMD18_RS08780 PF00152 tRNA synthetases class II (D, K and N) AMD18_RS08790 PF01008 Initiation factor 2 subunit family AMD18_RS08795 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD18_RS08795 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD18_RS08800 PF13360 PQQ-like domain AMD18_RS08810 PF17392 Urocanase C-terminal domain AMD18_RS08810 PF17391 Urocanase N-terminal domain AMD18_RS08810 PF01175 Urocanase Rossmann-like domain AMD18_RS08820 PF00221 Aromatic amino acid lyase AMD18_RS08825 PF07969 Amidohydrolase family AMD18_RS08840 PF00392 Bacterial regulatory proteins, gntR family AMD18_RS08840 PF07702 UTRA domain AMD18_RS08870 PF01794 Ferric reductase like transmembrane component AMD18_RS08875 PF00174 Oxidoreductase molybdopterin binding domain AMD18_RS08880 PF00266 Aminotransferase class-V AMD18_RS08885 PF00800 Prephenate dehydratase AMD18_RS08885 PF01817 Chorismate mutase type II AMD18_RS08885 PF01842 ACT domain AMD18_RS08890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD18_RS08900 PF03544 Gram-negative bacterial TonB protein C-terminal AMD18_RS08905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD18_RS08905 PF02403 Seryl-tRNA synthetase N-terminal domain AMD18_RS08910 PF02525 Flavodoxin-like fold AMD18_RS08915 PF03466 LysR substrate binding domain AMD18_RS08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS08930 PF00672 HAMP domain AMD18_RS08930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS08930 PF02203 Tar ligand binding domain homologue AMD18_RS08935 PF01494 FAD binding domain AMD18_RS08955 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS08955 PF13188 PAS domain AMD18_RS08955 PF08448 PAS fold AMD18_RS08955 PF00072 Response regulator receiver domain AMD18_RS08955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS08960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD18_RS08960 PF00072 Response regulator receiver domain AMD18_RS08960 PF01627 Hpt domain AMD18_RS08960 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS08960 PF00672 HAMP domain AMD18_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS08965 PF06745 KaiC AMD18_RS08970 PF13426 PAS domain AMD18_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS08970 PF00072 Response regulator receiver domain AMD18_RS08980 PF03918 Cytochrome C biogenesis protein AMD18_RS08985 PF08534 Redoxin AMD18_RS08990 PF01578 Cytochrome C assembly protein AMD18_RS08990 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD18_RS08995 PF03100 CcmE AMD18_RS09005 PF01578 Cytochrome C assembly protein AMD18_RS09010 PF00082 Subtilase family AMD18_RS09020 PF08281 Sigma-70, region 4 AMD18_RS09020 PF04542 Sigma-70 region 2 AMD18_RS09035 PF00034 Cytochrome c AMD18_RS09050 PF05523 WxcM-like, C-terminal AMD18_RS09070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD18_RS09075 PF01943 Polysaccharide biosynthesis protein AMD18_RS09080 PF00535 Glycosyl transferase family 2 AMD18_RS09095 PF08241 Methyltransferase domain AMD18_RS09115 PF00534 Glycosyl transferases group 1 AMD18_RS09115 PF13579 Glycosyl transferase 4-like domain AMD18_RS09130 PF00005 ABC transporter AMD18_RS09135 PF00005 ABC transporter AMD18_RS09135 PF00664 ABC transporter transmembrane region AMD18_RS09140 PF07690 Major Facilitator Superfamily AMD18_RS09145 PF00296 Luciferase-like monooxygenase AMD18_RS09160 PF00571 CBS domain AMD18_RS09160 PF03471 Transporter associated domain AMD18_RS09160 PF01595 Cyclin M transmembrane N-terminal domain AMD18_RS09170 PF01384 Phosphate transporter family AMD18_RS09185 PF01751 Toprim domain AMD18_RS09185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS09185 PF00986 DNA gyrase B subunit, carboxyl terminus AMD18_RS09185 PF00204 DNA gyrase B AMD18_RS09195 PF00117 Glutamine amidotransferase class-I AMD18_RS09195 PF06418 CTP synthase N-terminus AMD18_RS09200 PF00793 DAHP synthetase I family AMD18_RS09210 PF00113 Enolase, C-terminal TIM barrel domain AMD18_RS09210 PF03952 Enolase, N-terminal domain AMD18_RS09215 PF04977 Septum formation initiator AMD18_RS09220 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD18_RS09225 PF02542 YgbB family AMD18_RS09230 PF01142 tRNA pseudouridine synthase D (TruD) AMD18_RS09235 PF01713 Smr domain AMD18_RS09240 PF01975 Survival protein SurE AMD18_RS09250 PF09335 SNARE associated Golgi protein AMD18_RS09255 PF01551 Peptidase family M23 AMD18_RS09255 PF01476 LysM domain AMD18_RS09260 PF04430 Protein of unknown function (DUF498/DUF598) AMD18_RS09265 PF01985 CRS1 / YhbY (CRM) domain AMD18_RS09270 PF01728 FtsJ-like methyltransferase AMD18_RS09275 PF06480 FtsH Extracellular AMD18_RS09275 PF00004 ATPase family associated with various cellular activities (AAA) AMD18_RS09275 PF17862 AAA+ lid domain AMD18_RS09275 PF01434 Peptidase family M41 AMD18_RS09280 PF00809 Pterin binding enzyme AMD18_RS09290 PF17209 Hfq protein AMD18_RS09295 PF16360 GTP-binding GTPase Middle Region AMD18_RS09295 PF13167 GTP-binding GTPase N-terminal AMD18_RS09295 PF01926 50S ribosome-binding GTPase AMD18_RS09300 PF02464 Competence-damaged protein AMD18_RS09305 PF03109 ABC1 family AMD18_RS09310 PF01726 LexA DNA binding domain AMD18_RS09310 PF00717 Peptidase S24-like AMD18_RS09315 PF00154 recA bacterial DNA recombination protein AMD18_RS09320 PF02631 RecX family AMD18_RS09325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD18_RS09325 PF01411 tRNA synthetases class II (A) AMD18_RS09325 PF02272 DHHA1 domain AMD18_RS09330 PF02599 Global regulator protein family AMD18_RS09340 PF13426 PAS domain AMD18_RS09340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS09340 PF08447 PAS fold AMD18_RS09345 PF02678 Pirin AMD18_RS09345 PF17954 Quercetinase C-terminal cupin domain AMD18_RS09355 PF03466 LysR substrate binding domain AMD18_RS09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS09380 PF02581 Thiamine monophosphate synthase AMD18_RS09380 PF08543 Phosphomethylpyrimidine kinase AMD18_RS09395 PF13638 PIN domain AMD18_RS09395 PF02562 PhoH-like protein AMD18_RS09400 PF00578 AhpC/TSA family AMD18_RS09415 PF00701 Dihydrodipicolinate synthetase family AMD18_RS09425 PF00037 4Fe-4S binding domain AMD18_RS09425 PF11953 Domain of unknown function (DUF3470) AMD18_RS09430 PF05035 2-keto-3-deoxy-galactonokinase AMD18_RS09435 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD18_RS09440 PF13378 Enolase C-terminal domain-like AMD18_RS09440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD18_RS09445 PF01081 KDPG and KHG aldolase AMD18_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS09455 PF03466 LysR substrate binding domain AMD18_RS09470 PF00942 Cellulose binding domain AMD18_RS09470 PF03442 Carbohydrate binding domain X2 AMD18_RS09485 PF16338 Domain of unknown function (DUF4968) AMD18_RS09485 PF17137 Domain of unknown function (DUF5110) AMD18_RS09485 PF01055 Glycosyl hydrolases family 31 AMD18_RS09495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD18_RS09495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD18_RS09505 PF00083 Sugar (and other) transporter AMD18_RS09515 PF01520 N-acetylmuramoyl-L-alanine amidase AMD18_RS09520 PF02649 Type I GTP cyclohydrolase folE2 AMD18_RS09530 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD18_RS09530 PF12626 Polymerase A arginine-rich C-terminus AMD18_RS09530 PF01743 Poly A polymerase head domain AMD18_RS09535 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD18_RS09540 PF02548 Ketopantoate hydroxymethyltransferase AMD18_RS09545 PF02569 Pantoate-beta-alanine ligase AMD18_RS09550 PF02261 Aspartate decarboxylase AMD18_RS09555 PF00342 Phosphoglucose isomerase AMD18_RS09575 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD18_RS09575 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD18_RS09575 PF14310 Fibronectin type III-like domain AMD18_RS09580 PF00474 Sodium:solute symporter family AMD18_RS09585 PF01590 GAF domain AMD18_RS09585 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS09585 PF00360 Phytochrome region AMD18_RS09585 PF00563 EAL domain AMD18_RS09590 PF00150 Cellulase (glycosyl hydrolase family 5) AMD18_RS09590 PF02013 Cellulose or protein binding domain AMD18_RS09595 PF00072 Response regulator receiver domain AMD18_RS09605 PF04551 GcpE protein AMD18_RS09610 PF01569 PAP2 superfamily AMD18_RS09615 PF07690 Major Facilitator Superfamily AMD18_RS09620 PF01177 Asp/Glu/Hydantoin racemase AMD18_RS09625 PF00892 EamA-like transporter family AMD18_RS09630 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD18_RS09630 PF01565 FAD binding domain AMD18_RS09635 PF01180 Dihydroorotate dehydrogenase AMD18_RS09650 PF00171 Aldehyde dehydrogenase family AMD18_RS09665 PF00535 Glycosyl transferase family 2 AMD18_RS09670 PF01522 Polysaccharide deacetylase AMD18_RS09670 PF14883 Hypothetical glycosyl hydrolase family 13 AMD18_RS09680 PF08479 POTRA domain, ShlB-type AMD18_RS09680 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD18_RS09680 PF17287 POTRA domain AMD18_RS09685 PF05594 Haemagluttinin repeat AMD18_RS09685 PF04829 Pre-toxin domain with VENN motif AMD18_RS09685 PF13332 Hemagglutinin repeat AMD18_RS09690 PF04829 Pre-toxin domain with VENN motif AMD18_RS09690 PF13332 Hemagglutinin repeat AMD18_RS09690 PF05594 Haemagluttinin repeat AMD18_RS09695 PF13332 Hemagglutinin repeat AMD18_RS09695 PF05594 Haemagluttinin repeat AMD18_RS09695 PF13018 Extended Signal Peptide of Type V secretion system AMD18_RS09695 PF05860 haemagglutination activity domain AMD18_RS09695 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain AMD18_RS09705 PF00742 Homoserine dehydrogenase AMD18_RS09705 PF03447 Homoserine dehydrogenase, NAD binding domain AMD18_RS09705 PF01842 ACT domain AMD18_RS09705 PF00696 Amino acid kinase family AMD18_RS09705 PF13840 ACT domain AMD18_RS09710 PF08544 GHMP kinases C terminal AMD18_RS09710 PF00288 GHMP kinases N terminal domain AMD18_RS09720 PF14821 Threonine synthase N terminus AMD18_RS09720 PF00291 Pyridoxal-phosphate dependent enzyme AMD18_RS09730 PF13545 Crp-like helix-turn-helix domain AMD18_RS09730 PF00027 Cyclic nucleotide-binding domain AMD18_RS09735 PF03129 Anticodon binding domain AMD18_RS09735 PF13393 Histidyl-tRNA synthetase AMD18_RS09745 PF08029 HisG, C-terminal domain AMD18_RS09745 PF01634 ATP phosphoribosyltransferase AMD18_RS09750 PF00815 Histidinol dehydrogenase AMD18_RS09755 PF00155 Aminotransferase class I and II AMD18_RS09760 PF00475 Imidazoleglycerol-phosphate dehydratase AMD18_RS09765 PF00117 Glutamine amidotransferase class-I AMD18_RS09770 PF00977 Histidine biosynthesis protein AMD18_RS09775 PF00977 Histidine biosynthesis protein AMD18_RS09780 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD18_RS09780 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD18_RS09800 PF03079 ARD/ARD' family AMD18_RS09805 PF00596 Class II Aldolase and Adducin N-terminal domain AMD18_RS09810 PF13520 Amino acid permease AMD18_RS09815 PF13520 Amino acid permease AMD18_RS09825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD18_RS09825 PF01842 ACT domain AMD18_RS09825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD18_RS09830 PF02913 FAD linked oxidases, C-terminal domain AMD18_RS09830 PF01565 FAD binding domain AMD18_RS09850 PF09285 Elongation factor P, C-terminal AMD18_RS09850 PF08207 Elongation factor P (EF-P) KOW-like domain AMD18_RS09850 PF01132 Elongation factor P (EF-P) OB domain AMD18_RS09855 PF00106 short chain dehydrogenase AMD18_RS09860 PF00682 HMGL-like AMD18_RS09870 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS09880 PF02421 Ferrous iron transport protein B AMD18_RS09880 PF07670 Nucleoside recognition AMD18_RS09880 PF07664 Ferrous iron transport protein B C terminus AMD18_RS09895 PF00155 Aminotransferase class I and II AMD18_RS09900 PF03475 3-alpha domain AMD18_RS09900 PF03473 MOSC domain AMD18_RS09905 PF01113 Dihydrodipicolinate reductase, N-terminus AMD18_RS09905 PF05173 Dihydrodipicolinate reductase, C-terminus AMD18_RS09910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD18_RS09910 PF00117 Glutamine amidotransferase class-I AMD18_RS09920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD18_RS09920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD18_RS09920 PF02142 MGS-like domain AMD18_RS09925 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD18_RS09925 PF03449 Transcription elongation factor, N-terminal AMD18_RS09935 PF17768 RecJ OB domain AMD18_RS09935 PF02272 DHHA1 domain AMD18_RS09935 PF01368 DHH family AMD18_RS09980 PF04397 LytTr DNA-binding domain AMD18_RS09980 PF00072 Response regulator receiver domain AMD18_RS09985 PF00472 RF-1 domain AMD18_RS09985 PF03462 PCRF domain AMD18_RS09990 PF01336 OB-fold nucleic acid binding domain AMD18_RS09990 PF00152 tRNA synthetases class II (D, K and N) AMD18_RS09995 PF00072 Response regulator receiver domain AMD18_RS10000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS10000 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS10000 PF01627 Hpt domain AMD18_RS10000 PF00072 Response regulator receiver domain AMD18_RS10005 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS10010 PF13193 AMP-binding enzyme C-terminal domain AMD18_RS10010 PF00501 AMP-binding enzyme AMD18_RS10020 PF00330 Aconitase family (aconitate hydratase) AMD18_RS10020 PF00694 Aconitase C-terminal domain AMD18_RS10035 PF00330 Aconitase family (aconitate hydratase) AMD18_RS10035 PF11791 Aconitate B N-terminal domain AMD18_RS10035 PF06434 Aconitate hydratase 2 N-terminus AMD18_RS10040 PF00561 alpha/beta hydrolase fold AMD18_RS10045 PF00563 EAL domain AMD18_RS10045 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS10045 PF03707 Bacterial signalling protein N terminal repeat AMD18_RS10050 PF00072 Response regulator receiver domain AMD18_RS10050 PF01339 CheB methylesterase AMD18_RS10055 PF03975 CheD chemotactic sensory transduction AMD18_RS10060 PF01739 CheR methyltransferase, SAM binding domain AMD18_RS10060 PF03705 CheR methyltransferase, all-alpha domain AMD18_RS10065 PF02203 Tar ligand binding domain homologue AMD18_RS10065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10065 PF00672 HAMP domain AMD18_RS10070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10070 PF00672 HAMP domain AMD18_RS10070 PF02203 Tar ligand binding domain homologue AMD18_RS10075 PF02203 Tar ligand binding domain homologue AMD18_RS10075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10075 PF00672 HAMP domain AMD18_RS10085 PF00672 HAMP domain AMD18_RS10085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10085 PF02203 Tar ligand binding domain homologue AMD18_RS10090 PF02203 Tar ligand binding domain homologue AMD18_RS10090 PF00672 HAMP domain AMD18_RS10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10095 PF00672 HAMP domain AMD18_RS10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10100 PF02203 Tar ligand binding domain homologue AMD18_RS10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10100 PF00672 HAMP domain AMD18_RS10115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10115 PF00672 HAMP domain AMD18_RS10115 PF02203 Tar ligand binding domain homologue AMD18_RS10120 PF08269 Cache domain AMD18_RS10120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10130 PF02203 Tar ligand binding domain homologue AMD18_RS10130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10130 PF00672 HAMP domain AMD18_RS10135 PF01584 CheW-like domain AMD18_RS10135 PF09078 CheY binding AMD18_RS10135 PF02895 Signal transducing histidine kinase, homodimeric domain AMD18_RS10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS10135 PF01627 Hpt domain AMD18_RS10140 PF00072 Response regulator receiver domain AMD18_RS10150 PF01584 CheW-like domain AMD18_RS10155 PF13614 AAA domain AMD18_RS10160 PF00691 OmpA family AMD18_RS10160 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD18_RS10165 PF01618 MotA/TolQ/ExbB proton channel family AMD18_RS10180 PF00069 Protein kinase domain AMD18_RS10180 PF03793 PASTA domain AMD18_RS10250 PF04055 Radical SAM superfamily AMD18_RS10250 PF13186 Iron-sulfur cluster-binding domain AMD18_RS10265 PF01584 CheW-like domain AMD18_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS10265 PF01627 Hpt domain AMD18_RS10265 PF00072 Response regulator receiver domain AMD18_RS10265 PF02895 Signal transducing histidine kinase, homodimeric domain AMD18_RS10270 PF04344 Chemotaxis phosphatase, CheZ AMD18_RS10275 PF00072 Response regulator receiver domain AMD18_RS10280 PF04539 Sigma-70 region 3 AMD18_RS10280 PF04545 Sigma-70, region 4 AMD18_RS10280 PF04542 Sigma-70 region 2 AMD18_RS10285 PF10609 NUBPL iron-transfer P-loop NTPase AMD18_RS10290 PF00448 SRP54-type protein, GTPase domain AMD18_RS10295 PF00771 FHIPEP family AMD18_RS10300 PF01312 FlhB HrpN YscU SpaS Family AMD18_RS10305 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS10305 PF03707 Bacterial signalling protein N terminal repeat AMD18_RS10305 PF00563 EAL domain AMD18_RS10310 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS10320 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS10325 PF01311 Bacterial export proteins, family 1 AMD18_RS10330 PF01313 Bacterial export proteins, family 3 AMD18_RS10335 PF00813 FliP family AMD18_RS10340 PF04347 Flagellar biosynthesis protein, FliO AMD18_RS10345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD18_RS10350 PF02154 Flagellar motor switch protein FliM AMD18_RS10350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMD18_RS10370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD18_RS10370 PF18269 T3SS EscN ATPase C-terminal domain AMD18_RS10380 PF14842 FliG N-terminal domain AMD18_RS10380 PF01706 FliG C-terminal domain AMD18_RS10380 PF14841 FliG middle domain AMD18_RS10385 PF01514 Secretory protein of YscJ/FliF family AMD18_RS10385 PF08345 Flagellar M-ring protein C-terminal AMD18_RS10390 PF02049 Flagellar hook-basal body complex protein FliE AMD18_RS10395 PF00535 Glycosyl transferase family 2 AMD18_RS10395 PF00534 Glycosyl transferases group 1 AMD18_RS10430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD18_RS10430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD18_RS10440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMD18_RS10445 PF06490 Flagellar regulatory protein FleQ AMD18_RS10445 PF00158 Sigma-54 interaction domain AMD18_RS10445 PF02954 Bacterial regulatory protein, Fis family AMD18_RS10450 PF00072 Response regulator receiver domain AMD18_RS10450 PF01339 CheB methylesterase AMD18_RS10455 PF04552 Sigma-54, DNA binding domain AMD18_RS10455 PF04963 Sigma-54 factor, core binding domain AMD18_RS10455 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD18_RS10460 PF00072 Response regulator receiver domain AMD18_RS10460 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS10475 PF02561 Flagellar protein FliS AMD18_RS10480 PF07196 Flagellin hook IN motif AMD18_RS10480 PF02465 Flagellar hook-associated protein 2 N-terminus AMD18_RS10480 PF07195 Flagellar hook-associated protein 2 C-terminus AMD18_RS10485 PF00700 Bacterial flagellin C-terminal helical region AMD18_RS10485 PF00669 Bacterial flagellin N-terminal helical region AMD18_RS10490 PF00700 Bacterial flagellin C-terminal helical region AMD18_RS10490 PF00669 Bacterial flagellin N-terminal helical region AMD18_RS10495 PF07196 Flagellin hook IN motif AMD18_RS10495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD18_RS10500 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD18_RS10500 PF10135 Rod binding protein AMD18_RS10505 PF02119 Flagellar P-ring protein AMD18_RS10510 PF02107 Flagellar L-ring protein AMD18_RS10515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD18_RS10515 PF00460 Flagella basal body rod protein AMD18_RS10520 PF00460 Flagella basal body rod protein AMD18_RS10520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD18_RS10525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD18_RS10525 PF07559 Flagellar basal body protein FlaE AMD18_RS10525 PF00460 Flagella basal body rod protein AMD18_RS10530 PF03963 Flagellar hook capping protein - N-terminal region AMD18_RS10535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMD18_RS10535 PF00460 Flagella basal body rod protein AMD18_RS10545 PF01584 CheW-like domain AMD18_RS10545 PF00072 Response regulator receiver domain AMD18_RS10565 PF13426 PAS domain AMD18_RS10565 PF13188 PAS domain AMD18_RS10565 PF00989 PAS fold AMD18_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS10565 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS10570 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS10570 PF03707 Bacterial signalling protein N terminal repeat AMD18_RS10570 PF00563 EAL domain AMD18_RS10575 PF07730 Histidine kinase AMD18_RS10575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS10580 PF03707 Bacterial signalling protein N terminal repeat AMD18_RS10580 PF00563 EAL domain AMD18_RS10580 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS10590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS10590 PF00672 HAMP domain AMD18_RS10590 PF12729 Four helix bundle sensory module for signal transduction AMD18_RS10595 PF04356 Protein of unknown function (DUF489) AMD18_RS10605 PF00293 NUDIX domain AMD18_RS10610 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD18_RS10615 PF17871 AAA lid domain AMD18_RS10615 PF02861 Clp amino terminal domain, pathogenicity island component AMD18_RS10615 PF10431 C-terminal, D2-small domain, of ClpB protein AMD18_RS10615 PF00004 ATPase family associated with various cellular activities (AAA) AMD18_RS10615 PF07724 AAA domain (Cdc48 subfamily) AMD18_RS10620 PF01176 Translation initiation factor 1A / IF-1 AMD18_RS10625 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD18_RS10635 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS10640 PF09397 Ftsk gamma domain AMD18_RS10640 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMD18_RS10640 PF17854 FtsK alpha domain AMD18_RS10640 PF01580 FtsK/SpoIIIE family AMD18_RS10650 PF03548 Outer membrane lipoprotein carrier protein LolA AMD18_RS10660 PF00004 ATPase family associated with various cellular activities (AAA) AMD18_RS10660 PF16193 AAA C-terminal domain AMD18_RS10660 PF12002 MgsA AAA+ ATPase C terminal AMD18_RS10665 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMD18_RS10675 PF02803 Thiolase, C-terminal domain AMD18_RS10675 PF00108 Thiolase, N-terminal domain AMD18_RS10680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD18_RS10680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD18_RS10680 PF00378 Enoyl-CoA hydratase/isomerase AMD18_RS10690 PF00334 Nucleoside diphosphate kinase AMD18_RS10695 PF04055 Radical SAM superfamily AMD18_RS10705 PF13464 Domain of unknown function (DUF4115) AMD18_RS10715 PF13360 PQQ-like domain AMD18_RS10715 PF01011 PQQ enzyme repeat AMD18_RS10720 PF01926 50S ribosome-binding GTPase AMD18_RS10720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD18_RS10725 PF00994 Probable molybdopterin binding domain AMD18_RS10725 PF03454 MoeA C-terminal region (domain IV) AMD18_RS10725 PF03453 MoeA N-terminal region (domain I and II) AMD18_RS10730 PF00899 ThiF family AMD18_RS10755 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS10755 PF13823 Alcohol dehydrogenase GroES-associated AMD18_RS10755 PF00107 Zinc-binding dehydrogenase AMD18_RS10765 PF03372 Endonuclease/Exonuclease/phosphatase family AMD18_RS10775 PF00994 Probable molybdopterin binding domain AMD18_RS10775 PF03454 MoeA C-terminal region (domain IV) AMD18_RS10775 PF03453 MoeA N-terminal region (domain I and II) AMD18_RS10780 PF12804 MobA-like NTP transferase domain AMD18_RS10790 PF00561 alpha/beta hydrolase fold AMD18_RS10795 PF01566 Natural resistance-associated macrophage protein AMD18_RS10800 PF02742 Iron dependent repressor, metal binding and dimerisation domain AMD18_RS10800 PF01325 Iron dependent repressor, N-terminal DNA binding domain AMD18_RS10805 PF14437 MafB19-like deaminase AMD18_RS10810 PF00929 Exonuclease AMD18_RS10815 PF05552 Conserved TM helix AMD18_RS10815 PF00924 Mechanosensitive ion channel AMD18_RS10820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD18_RS10820 PF02896 PEP-utilising enzyme, TIM barrel domain AMD18_RS10820 PF00391 PEP-utilising enzyme, mobile domain AMD18_RS10825 PF03618 Kinase/pyrophosphorylase AMD18_RS10845 PF01066 CDP-alcohol phosphatidyltransferase AMD18_RS10855 PF00561 alpha/beta hydrolase fold AMD18_RS10870 PF01266 FAD dependent oxidoreductase AMD18_RS10870 PF00355 Rieske [2Fe-2S] domain AMD18_RS10880 PF09371 Tex-like protein N-terminal domain AMD18_RS10880 PF16921 Tex protein YqgF-like domain AMD18_RS10880 PF17674 HHH domain AMD18_RS10880 PF00575 S1 RNA binding domain AMD18_RS10885 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS10885 PF09308 LuxQ, periplasmic AMD18_RS10885 PF00072 Response regulator receiver domain AMD18_RS10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS10925 PF00034 Cytochrome c AMD18_RS10935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS10940 PF00873 AcrB/AcrD/AcrF family AMD18_RS10945 PF00873 AcrB/AcrD/AcrF family AMD18_RS10950 PF01081 KDPG and KHG aldolase AMD18_RS10955 PF00920 Dehydratase family AMD18_RS10960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD18_RS10965 PF02685 Glucokinase AMD18_RS10970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD18_RS10970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD18_RS10975 PF17912 MalK OB fold domain AMD18_RS10975 PF00005 ABC transporter AMD18_RS10985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD18_RS10990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD18_RS10995 PF02910 Fumarate reductase flavoprotein C-term AMD18_RS10995 PF00890 FAD binding domain AMD18_RS11005 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD18_RS11010 PF03937 Flavinator of succinate dehydrogenase AMD18_RS11020 PF12704 MacB-like periplasmic core domain AMD18_RS11020 PF02687 FtsX-like permease family AMD18_RS11025 PF00005 ABC transporter AMD18_RS11035 PF00753 Metallo-beta-lactamase superfamily AMD18_RS11035 PF03772 Competence protein AMD18_RS11040 PF01618 MotA/TolQ/ExbB proton channel family AMD18_RS11050 PF00005 ABC transporter AMD18_RS11050 PF00664 ABC transporter transmembrane region AMD18_RS11055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD18_RS11060 PF02348 Cytidylyltransferase AMD18_RS11065 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD18_RS11075 PF08459 UvrC Helix-hairpin-helix N-terminal AMD18_RS11075 PF02151 UvrB/uvrC motif AMD18_RS11075 PF01541 GIY-YIG catalytic domain AMD18_RS11080 PF01066 CDP-alcohol phosphatidyltransferase AMD18_RS11100 PF00501 AMP-binding enzyme AMD18_RS11100 PF00550 Phosphopantetheine attachment site AMD18_RS11100 PF00668 Condensation domain AMD18_RS11100 PF13193 AMP-binding enzyme C-terminal domain AMD18_RS11105 PF00975 Thioesterase domain AMD18_RS11105 PF00550 Phosphopantetheine attachment site AMD18_RS11105 PF00501 AMP-binding enzyme AMD18_RS11105 PF13193 AMP-binding enzyme C-terminal domain AMD18_RS11105 PF00668 Condensation domain AMD18_RS11115 PF01527 Transposase AMD18_RS11120 PF13276 HTH-like domain AMD18_RS11120 PF00665 Integrase core domain AMD18_RS11120 PF13333 Integrase core domain AMD18_RS11135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD18_RS11135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD18_RS11135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD18_RS11145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD18_RS11155 PF00581 Rhodanese-like domain AMD18_RS11155 PF17773 UPF0176 acylphosphatase like domain AMD18_RS11160 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS11160 PF00072 Response regulator receiver domain AMD18_RS11165 PF00575 S1 RNA binding domain AMD18_RS11165 PF10150 Ribonuclease E/G family AMD18_RS11165 PF12111 Polyribonucleotide phosphorylase C terminal AMD18_RS11170 PF01479 S4 domain AMD18_RS11170 PF00849 RNA pseudouridylate synthase AMD18_RS11175 PF11737 Protein of unknown function (DUF3300) AMD18_RS11180 PF02535 ZIP Zinc transporter AMD18_RS11190 PF01329 Pterin 4 alpha carbinolamine dehydratase AMD18_RS11195 PF01106 NifU-like domain AMD18_RS11240 PF08241 Methyltransferase domain AMD18_RS11240 PF12697 Alpha/beta hydrolase family AMD18_RS11250 PF00106 short chain dehydrogenase AMD18_RS11280 PF01494 FAD binding domain AMD18_RS11285 PF09335 SNARE associated Golgi protein AMD18_RS11295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD18_RS11305 PF07995 Glucose / Sorbosone dehydrogenase AMD18_RS11315 PF00144 Beta-lactamase AMD18_RS11320 PF04397 LytTr DNA-binding domain AMD18_RS11320 PF00072 Response regulator receiver domain AMD18_RS11325 PF07694 5TMR of 5TMR-LYT AMD18_RS11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS11325 PF06580 Histidine kinase AMD18_RS11340 PF03797 Autotransporter beta-domain AMD18_RS11340 PF00082 Subtilase family AMD18_RS11345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS11350 PF00873 AcrB/AcrD/AcrF family AMD18_RS11360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS11360 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS11360 PF00072 Response regulator receiver domain AMD18_RS11360 PF08448 PAS fold AMD18_RS11360 PF13426 PAS domain AMD18_RS11365 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS11365 PF00072 Response regulator receiver domain AMD18_RS11370 PF12951 Passenger-associated-transport-repeat AMD18_RS11370 PF12951 Passenger-associated-transport-repeat AMD18_RS11375 PF00563 EAL domain AMD18_RS11375 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS11375 PF08447 PAS fold AMD18_RS11375 PF08448 PAS fold AMD18_RS11390 PF05974 Domain of unknown function (DUF892) AMD18_RS11405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD18_RS11405 PF14824 Sirohaem biosynthesis protein central AMD18_RS11405 PF10414 Sirohaem synthase dimerisation region AMD18_RS11420 PF05977 Transmembrane secretion effector AMD18_RS11430 PF07969 Amidohydrolase family AMD18_RS11440 PF00857 Isochorismatase family AMD18_RS11455 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS11455 PF00072 Response regulator receiver domain AMD18_RS11475 PF03466 LysR substrate binding domain AMD18_RS11475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS11480 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AMD18_RS11480 PF00361 Proton-conducting membrane transporter AMD18_RS11480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD18_RS11485 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AMD18_RS11500 PF01381 Helix-turn-helix AMD18_RS11505 PF05284 Protein of unknown function (DUF736) AMD18_RS11510 PF04002 RadC-like JAB domain AMD18_RS11535 PF00589 Phage integrase family AMD18_RS11535 PF13356 Arm DNA-binding domain AMD18_RS11550 PF00593 TonB dependent receptor AMD18_RS11550 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS11565 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AMD18_RS11590 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS11590 PF00593 TonB dependent receptor AMD18_RS11600 PF10947 Protein of unknown function (DUF2628) AMD18_RS11610 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AMD18_RS11610 PF00722 Glycosyl hydrolases family 16 AMD18_RS11630 PF03412 Peptidase C39 family AMD18_RS11630 PF00005 ABC transporter AMD18_RS11630 PF00664 ABC transporter transmembrane region AMD18_RS11640 PF13614 AAA domain AMD18_RS11680 PF01131 DNA topoisomerase AMD18_RS11680 PF01751 Toprim domain AMD18_RS11685 PF00145 C-5 cytosine-specific DNA methylase AMD18_RS11735 PF06250 YhcG PDDEXK nuclease domain AMD18_RS11735 PF17761 DUF1016 N-terminal domain AMD18_RS11755 PF00892 EamA-like transporter family AMD18_RS11760 PF00892 EamA-like transporter family AMD18_RS11770 PF02525 Flavodoxin-like fold AMD18_RS11775 PF00043 Glutathione S-transferase, C-terminal domain AMD18_RS11775 PF02798 Glutathione S-transferase, N-terminal domain AMD18_RS11780 PF05544 Proline racemase AMD18_RS11785 PF03358 NADPH-dependent FMN reductase AMD18_RS11795 PF07690 Major Facilitator Superfamily AMD18_RS11800 PF02311 AraC-like ligand binding domain AMD18_RS11800 PF12833 Helix-turn-helix domain AMD18_RS11950 PF00580 UvrD/REP helicase N-terminal domain AMD18_RS11950 PF12462 DNA helicase IV / RNA helicase N terminal AMD18_RS11950 PF13361 UvrD-like helicase C-terminal domain AMD18_RS12025 PF03466 LysR substrate binding domain AMD18_RS12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS12030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD18_RS12030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD18_RS12035 PF03401 Tripartite tricarboxylate transporter family receptor AMD18_RS12050 PF04002 RadC-like JAB domain AMD18_RS12085 PF13356 Arm DNA-binding domain AMD18_RS12085 PF00589 Phage integrase family AMD18_RS12090 PF00117 Glutamine amidotransferase class-I AMD18_RS12090 PF00958 GMP synthase C terminal domain AMD18_RS12090 PF02540 NAD synthase AMD18_RS12095 PF00478 IMP dehydrogenase / GMP reductase domain AMD18_RS12095 PF00571 CBS domain AMD18_RS12100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD18_RS12100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD18_RS12110 PF00999 Sodium/hydrogen exchanger family AMD18_RS12110 PF02254 TrkA-N domain AMD18_RS12115 PF00483 Nucleotidyl transferase AMD18_RS12120 PF02719 Polysaccharide biosynthesis protein AMD18_RS12125 PF00953 Glycosyl transferase family 4 AMD18_RS12130 PF18073 Rubredoxin metal binding domain AMD18_RS12140 PF00216 Bacterial DNA-binding protein AMD18_RS12145 PF00575 S1 RNA binding domain AMD18_RS12150 PF02224 Cytidylate kinase AMD18_RS12155 PF00444 Ribosomal protein L36 AMD18_RS12165 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMD18_RS12170 PF00795 Carbon-nitrogen hydrolase AMD18_RS12195 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS12220 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS12230 PF03795 YCII-related domain AMD18_RS12235 PF02616 Segregation and condensation protein ScpA AMD18_RS12240 PF04079 Segregation and condensation complex subunit ScpB AMD18_RS12245 PF01479 S4 domain AMD18_RS12245 PF00849 RNA pseudouridylate synthase AMD18_RS12260 PF00795 Carbon-nitrogen hydrolase AMD18_RS12265 PF00155 Aminotransferase class I and II AMD18_RS12270 PF00005 ABC transporter AMD18_RS12275 PF03379 CcmB protein AMD18_RS12280 PF01578 Cytochrome C assembly protein AMD18_RS12290 PF03100 CcmE AMD18_RS12295 PF01578 Cytochrome C assembly protein AMD18_RS12295 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMD18_RS12300 PF08534 Redoxin AMD18_RS12305 PF03918 Cytochrome C biogenesis protein AMD18_RS12315 PF00561 alpha/beta hydrolase fold AMD18_RS12320 PF00313 'Cold-shock' DNA-binding domain AMD18_RS12325 PF00664 ABC transporter transmembrane region AMD18_RS12325 PF00005 ABC transporter AMD18_RS12330 PF00005 ABC transporter AMD18_RS12330 PF00664 ABC transporter transmembrane region AMD18_RS12335 PF01654 Cytochrome bd terminal oxidase subunit I AMD18_RS12340 PF02322 Cytochrome bd terminal oxidase subunit II AMD18_RS12360 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD18_RS12360 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD18_RS12365 PF00171 Aldehyde dehydrogenase family AMD18_RS12370 PF01472 PUA domain AMD18_RS12370 PF00696 Amino acid kinase family AMD18_RS12380 PF00206 Lyase AMD18_RS12385 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD18_RS12395 PF00696 Amino acid kinase family AMD18_RS12395 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase AMD18_RS12400 PF07687 Peptidase dimerisation domain AMD18_RS12400 PF01546 Peptidase family M20/M25/M40 AMD18_RS12410 PF00764 Arginosuccinate synthase AMD18_RS12415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD18_RS12415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD18_RS12425 PF01406 tRNA synthetases class I (C) catalytic domain AMD18_RS12425 PF09190 DALR domain AMD18_RS12430 PF02657 Fe-S metabolism associated domain AMD18_RS12440 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD18_RS12450 PF01809 Putative membrane protein insertion efficiency factor AMD18_RS12455 PF01979 Amidohydrolase family AMD18_RS12460 PF01551 Peptidase family M23 AMD18_RS12460 PF08460 Bacterial SH3 domain AMD18_RS12475 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD18_RS12480 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD18_RS12490 PF00753 Metallo-beta-lactamase superfamily AMD18_RS12510 PF01527 Transposase AMD18_RS12515 PF00295 Glycosyl hydrolases family 28 AMD18_RS12525 PF13419 Haloacid dehalogenase-like hydrolase AMD18_RS12535 PF01979 Amidohydrolase family AMD18_RS12545 PF08207 Elongation factor P (EF-P) KOW-like domain AMD18_RS12545 PF01132 Elongation factor P (EF-P) OB domain AMD18_RS12545 PF09285 Elongation factor P, C-terminal AMD18_RS12550 PF04055 Radical SAM superfamily AMD18_RS12555 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS12555 PF00563 EAL domain AMD18_RS12555 PF13188 PAS domain AMD18_RS12555 PF03707 Bacterial signalling protein N terminal repeat AMD18_RS12565 PF00588 SpoU rRNA Methylase family AMD18_RS12570 PF00459 Inositol monophosphatase family AMD18_RS12575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD18_RS12575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD18_RS12580 PF00545 ribonuclease AMD18_RS12590 PF00005 ABC transporter AMD18_RS12590 PF16326 ABC transporter C-terminal domain AMD18_RS12590 PF12848 ABC transporter AMD18_RS12595 PF00271 Helicase conserved C-terminal domain AMD18_RS12595 PF03880 DbpA RNA binding domain AMD18_RS12595 PF00270 DEAD/DEAH box helicase AMD18_RS12600 PF00156 Phosphoribosyl transferase domain AMD18_RS12605 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMD18_RS12610 PF00135 Carboxylesterase family AMD18_RS12615 PF14497 Glutathione S-transferase, C-terminal domain AMD18_RS12615 PF02798 Glutathione S-transferase, N-terminal domain AMD18_RS12620 PF00313 'Cold-shock' DNA-binding domain AMD18_RS12625 PF07152 YaeQ protein AMD18_RS12635 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS12635 PF00563 EAL domain AMD18_RS12635 PF00072 Response regulator receiver domain AMD18_RS12640 PF01435 Peptidase family M48 AMD18_RS12645 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD18_RS12650 PF00106 short chain dehydrogenase AMD18_RS12655 PF07879 PHB/PHA accumulation regulator DNA-binding domain AMD18_RS12655 PF05233 PHB accumulation regulatory domain AMD18_RS12670 PF08676 MutL C terminal dimerisation domain AMD18_RS12670 PF01119 DNA mismatch repair protein, C-terminal domain AMD18_RS12675 PF01520 N-acetylmuramoyl-L-alanine amidase AMD18_RS12675 PF11741 AMIN domain AMD18_RS12680 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMD18_RS12685 PF01256 Carbohydrate kinase AMD18_RS12685 PF03853 YjeF-related protein N-terminus AMD18_RS12690 PF08331 Domain of unknown function (DUF1730) AMD18_RS12695 PF13742 OB-fold nucleic acid binding domain AMD18_RS12695 PF02601 Exonuclease VII, large subunit AMD18_RS12705 PF03781 Sulfatase-modifying factor enzyme 1 AMD18_RS12710 PF00570 HRDC domain AMD18_RS12710 PF01612 3'-5' exonuclease AMD18_RS12715 PF04679 ATP dependent DNA ligase C terminal region AMD18_RS12715 PF01068 ATP dependent DNA ligase domain AMD18_RS12715 PF13298 DNA polymerase Ligase (LigD) AMD18_RS12735 PF00589 Phage integrase family AMD18_RS12760 PF05598 Transposase domain (DUF772) AMD18_RS12770 PF01527 Transposase AMD18_RS12790 PF00171 Aldehyde dehydrogenase family AMD18_RS12790 PF01619 Proline dehydrogenase AMD18_RS12790 PF14850 DNA-binding domain of Proline dehydrogenase AMD18_RS12790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD18_RS12800 PF01527 Transposase AMD18_RS12805 PF00665 Integrase core domain AMD18_RS12805 PF13333 Integrase core domain AMD18_RS12805 PF13276 HTH-like domain AMD18_RS12810 PF02796 Helix-turn-helix domain of resolvase AMD18_RS12810 PF00239 Resolvase, N terminal domain AMD18_RS12825 PF02384 N-6 DNA Methylase AMD18_RS12830 PF09572 XamI restriction endonuclease AMD18_RS12885 PF01584 CheW-like domain AMD18_RS12890 PF02743 Cache domain AMD18_RS12890 PF00672 HAMP domain AMD18_RS12890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS12895 PF02245 Methylpurine-DNA glycosylase (MPG) AMD18_RS12900 PF00271 Helicase conserved C-terminal domain AMD18_RS12900 PF08494 DEAD/H associated AMD18_RS12900 PF00270 DEAD/DEAH box helicase AMD18_RS12915 PF04386 Stringent starvation protein B AMD18_RS12920 PF00043 Glutathione S-transferase, C-terminal domain AMD18_RS12920 PF02798 Glutathione S-transferase, N-terminal domain AMD18_RS12925 PF02167 Cytochrome C1 family AMD18_RS12930 PF00032 Cytochrome b(C-terminal)/b6/petD AMD18_RS12930 PF00033 Cytochrome b/b6/petB AMD18_RS12935 PF00355 Rieske [2Fe-2S] domain AMD18_RS12935 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMD18_RS12940 PF01464 Transglycosylase SLT domain AMD18_RS12955 PF01938 TRAM domain AMD18_RS12955 PF04055 Radical SAM superfamily AMD18_RS12955 PF00919 Uncharacterized protein family UPF0004 AMD18_RS12960 PF02562 PhoH-like protein AMD18_RS12970 PF02130 Uncharacterized protein family UPF0054 AMD18_RS12980 PF00571 CBS domain AMD18_RS12980 PF03471 Transporter associated domain AMD18_RS12995 PF00171 Aldehyde dehydrogenase family AMD18_RS13005 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS13010 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS13015 PF08402 TOBE domain AMD18_RS13015 PF00005 ABC transporter AMD18_RS13020 PF02321 Outer membrane efflux protein AMD18_RS13025 PF07690 Major Facilitator Superfamily AMD18_RS13030 PF13533 Biotin-lipoyl like AMD18_RS13035 PF13416 Bacterial extracellular solute-binding protein AMD18_RS13040 PF00202 Aminotransferase class-III AMD18_RS13045 PF00120 Glutamine synthetase, catalytic domain AMD18_RS13050 PF07722 Peptidase C26 AMD18_RS13055 PF00120 Glutamine synthetase, catalytic domain AMD18_RS13060 PF01266 FAD dependent oxidoreductase AMD18_RS13065 PF00072 Response regulator receiver domain AMD18_RS13065 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS13070 PF01814 Hemerythrin HHE cation binding domain AMD18_RS13075 PF07690 Major Facilitator Superfamily AMD18_RS13075 PF00083 Sugar (and other) transporter AMD18_RS13085 PF00384 Molybdopterin oxidoreductase AMD18_RS13090 PF02634 FdhD/NarQ family AMD18_RS13095 PF07690 Major Facilitator Superfamily AMD18_RS13100 PF00202 Aminotransferase class-III AMD18_RS13110 PF04286 Protein of unknown function (DUF445) AMD18_RS13115 PF00072 Response regulator receiver domain AMD18_RS13115 PF00672 HAMP domain AMD18_RS13115 PF01627 Hpt domain AMD18_RS13115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD18_RS13115 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS13115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS13120 PF00072 Response regulator receiver domain AMD18_RS13125 PF07690 Major Facilitator Superfamily AMD18_RS13130 PF05088 Bacterial NAD-glutamate dehydrogenase AMD18_RS13140 PF00529 HlyD membrane-fusion protein of T1SS AMD18_RS13140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS13145 PF00873 AcrB/AcrD/AcrF family AMD18_RS13150 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS13155 PF00391 PEP-utilising enzyme, mobile domain AMD18_RS13155 PF05524 PEP-utilising enzyme, N-terminal AMD18_RS13155 PF02896 PEP-utilising enzyme, TIM barrel domain AMD18_RS13155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD18_RS13155 PF00381 PTS HPr component phosphorylation site AMD18_RS13160 PF00294 pfkB family carbohydrate kinase AMD18_RS13165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AMD18_RS13200 PF07549 SecD/SecF GG Motif AMD18_RS13200 PF02355 Protein export membrane protein AMD18_RS13205 PF07549 SecD/SecF GG Motif AMD18_RS13205 PF13721 SecD export protein N-terminal TM region AMD18_RS13205 PF02355 Protein export membrane protein AMD18_RS13210 PF02699 Preprotein translocase subunit AMD18_RS13215 PF01702 Queuine tRNA-ribosyltransferase AMD18_RS13220 PF02547 Queuosine biosynthesis protein AMD18_RS13265 PF02927 Cellulase N-terminal ig-like domain AMD18_RS13265 PF00759 Glycosyl hydrolase family 9 AMD18_RS13280 PF00037 4Fe-4S binding domain AMD18_RS13295 PF01467 Cytidylyltransferase-like AMD18_RS13305 PF00183 Hsp90 protein AMD18_RS13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS13320 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS13320 PF00593 TonB dependent receptor AMD18_RS13325 PF04616 Glycosyl hydrolases family 43 AMD18_RS13330 PF07532 Bacterial Ig-like domain (group 4) AMD18_RS13335 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS13335 PF00593 TonB dependent receptor AMD18_RS13345 PF09286 Pro-kumamolisin, activation domain AMD18_RS13345 PF00082 Subtilase family AMD18_RS13370 PF13520 Amino acid permease AMD18_RS13385 PF00557 Metallopeptidase family M24 AMD18_RS13385 PF01321 Creatinase/Prolidase N-terminal domain AMD18_RS13390 PF00171 Aldehyde dehydrogenase family AMD18_RS13395 PF00701 Dihydrodipicolinate synthetase family AMD18_RS13400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS13400 PF04324 BFD-like [2Fe-2S] binding domain AMD18_RS13410 PF01266 FAD dependent oxidoreductase AMD18_RS13415 PF05544 Proline racemase AMD18_RS13425 PF00448 SRP54-type protein, GTPase domain AMD18_RS13425 PF02881 SRP54-type protein, helical bundle domain AMD18_RS13430 PF14815 NUDIX domain AMD18_RS13430 PF10576 Iron-sulfur binding domain of endonuclease III AMD18_RS13430 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD18_RS13430 PF00633 Helix-hairpin-helix motif AMD18_RS13435 PF04362 Bacterial Fe(2+) trafficking AMD18_RS13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS13440 PF00072 Response regulator receiver domain AMD18_RS13440 PF13426 PAS domain AMD18_RS13470 PF08212 Lipocalin-like domain AMD18_RS13480 PF02770 Acyl-CoA dehydrogenase, middle domain AMD18_RS13480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD18_RS13480 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMD18_RS13480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD18_RS13490 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD18_RS13490 PF02779 Transketolase, pyrimidine binding domain AMD18_RS13490 PF02780 Transketolase, C-terminal domain AMD18_RS13510 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMD18_RS13515 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD18_RS13515 PF00753 Metallo-beta-lactamase superfamily AMD18_RS13520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD18_RS13520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD18_RS13535 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMD18_RS13550 PF14667 Polysaccharide biosynthesis C-terminal domain AMD18_RS13560 PF13439 Glycosyltransferase Family 4 AMD18_RS13560 PF00534 Glycosyl transferases group 1 AMD18_RS13580 PF02397 Bacterial sugar transferase AMD18_RS13600 PF13411 MerR HTH family regulatory protein AMD18_RS13605 PF00216 Bacterial DNA-binding protein AMD18_RS13610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMD18_RS13610 PF03147 Ferredoxin-fold anticodon binding domain AMD18_RS13610 PF03483 B3/4 domain AMD18_RS13610 PF01588 Putative tRNA binding domain AMD18_RS13610 PF03484 tRNA synthetase B5 domain AMD18_RS13615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD18_RS13615 PF01409 tRNA synthetases class II core domain (F) AMD18_RS13620 PF00453 Ribosomal protein L20 AMD18_RS13625 PF01632 Ribosomal protein L35 AMD18_RS13630 PF00707 Translation initiation factor IF-3, C-terminal domain AMD18_RS13630 PF05198 Translation initiation factor IF-3, N-terminal domain AMD18_RS13635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD18_RS13635 PF02824 TGS domain AMD18_RS13635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD18_RS13635 PF03129 Anticodon binding domain AMD18_RS13640 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS13645 PF00686 Starch binding domain AMD18_RS13645 PF00128 Alpha amylase, catalytic domain AMD18_RS13650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD18_RS13660 PF10566 Glycoside hydrolase 97 AMD18_RS13660 PF14508 Glycosyl-hydrolase 97 N-terminal AMD18_RS13660 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD18_RS13675 PF00128 Alpha amylase, catalytic domain AMD18_RS13680 PF01527 Transposase AMD18_RS13720 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AMD18_RS13735 PF01464 Transglycosylase SLT domain AMD18_RS13740 PF00437 Type II/IV secretion system protein AMD18_RS13745 PF03743 Bacterial conjugation TrbI-like protein AMD18_RS13765 PF02534 Type IV secretory system Conjugative DNA transfer AMD18_RS13780 PF02151 UvrB/uvrC motif AMD18_RS13780 PF04851 Type III restriction enzyme, res subunit AMD18_RS13780 PF17757 UvrB interaction domain AMD18_RS13780 PF12344 Ultra-violet resistance protein B AMD18_RS13780 PF00271 Helicase conserved C-terminal domain AMD18_RS13845 PF01555 DNA methylase AMD18_RS13895 PF00182 Chitinase class I AMD18_RS13960 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS13960 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMD18_RS13965 PF05567 Neisseria PilC beta-propeller domain AMD18_RS13990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS13990 PF07694 5TMR of 5TMR-LYT AMD18_RS13990 PF06580 Histidine kinase AMD18_RS13995 PF03641 Possible lysine decarboxylase AMD18_RS13995 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AMD18_RS13995 PF11892 Domain of unknown function (DUF3412) AMD18_RS14000 PF00593 TonB dependent receptor AMD18_RS14005 PF01914 MarC family integral membrane protein AMD18_RS14015 PF00462 Glutaredoxin AMD18_RS14020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD18_RS14020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD18_RS14025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMD18_RS14025 PF02222 ATP-grasp domain AMD18_RS14030 PF00731 AIR carboxylase AMD18_RS14040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD18_RS14040 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD18_RS14050 PF00013 KH domain AMD18_RS14050 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD18_RS14050 PF01138 3' exoribonuclease family, domain 1 AMD18_RS14050 PF00575 S1 RNA binding domain AMD18_RS14050 PF03725 3' exoribonuclease family, domain 2 AMD18_RS14055 PF00312 Ribosomal protein S15 AMD18_RS14060 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD18_RS14060 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMD18_RS14060 PF09157 Pseudouridine synthase II TruB, C-terminal AMD18_RS14065 PF02033 Ribosome-binding factor A AMD18_RS14070 PF08364 Bacterial translation initiation factor IF-2 associated region AMD18_RS14070 PF04760 Translation initiation factor IF-2, N-terminal region AMD18_RS14070 PF00009 Elongation factor Tu GTP binding domain AMD18_RS14070 PF11987 Translation-initiation factor 2 AMD18_RS14075 PF13184 NusA-like KH domain AMD18_RS14075 PF00575 S1 RNA binding domain AMD18_RS14075 PF08529 NusA N-terminal domain AMD18_RS14080 PF02576 RimP N-terminal domain AMD18_RS14080 PF17384 RimP C-terminal SH3 domain AMD18_RS14090 PF00361 Proton-conducting membrane transporter AMD18_RS14095 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMD18_RS14095 PF00361 Proton-conducting membrane transporter AMD18_RS14100 PF00361 Proton-conducting membrane transporter AMD18_RS14100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD18_RS14105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD18_RS14110 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD18_RS14115 PF12838 4Fe-4S dicluster domain AMD18_RS14120 PF00146 NADH dehydrogenase AMD18_RS14125 PF00384 Molybdopterin oxidoreductase AMD18_RS14125 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMD18_RS14125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD18_RS14130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD18_RS14130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD18_RS14130 PF10531 SLBB domain AMD18_RS14140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD18_RS14145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD18_RS14150 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD18_RS14155 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD18_RS14170 PF00121 Triosephosphate isomerase AMD18_RS14175 PF00106 short chain dehydrogenase AMD18_RS14190 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS14190 PF00563 EAL domain AMD18_RS14190 PF03707 Bacterial signalling protein N terminal repeat AMD18_RS14210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD18_RS14210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD18_RS14210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD18_RS14210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD18_RS14215 PF01039 Carboxyl transferase domain AMD18_RS14215 PF17848 Acetyl-coA carboxylase zinc finger domain AMD18_RS14220 PF00290 Tryptophan synthase alpha chain AMD18_RS14230 PF00291 Pyridoxal-phosphate dependent enzyme AMD18_RS14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS14235 PF03466 LysR substrate binding domain AMD18_RS14240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD18_RS14245 PF01416 tRNA pseudouridine synthase AMD18_RS14265 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD18_RS14265 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD18_RS14270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD18_RS14270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD18_RS14275 PF01264 Chorismate synthase AMD18_RS14280 PF05175 Methyltransferase small domain AMD18_RS14285 PF02630 SCO1/SenC AMD18_RS14290 PF02666 Phosphatidylserine decarboxylase AMD18_RS14300 PF05872 Bacterial protein of unknown function (DUF853) AMD18_RS14305 PF00293 NUDIX domain AMD18_RS14320 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD18_RS14320 PF03449 Transcription elongation factor, N-terminal AMD18_RS14325 PF04055 Radical SAM superfamily AMD18_RS14325 PF18693 TRAM domain AMD18_RS14325 PF00919 Uncharacterized protein family UPF0004 AMD18_RS14330 PF01738 Dienelactone hydrolase family AMD18_RS14350 PF00692 dUTPase AMD18_RS14355 PF10609 NUBPL iron-transfer P-loop NTPase AMD18_RS14360 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS14360 PF00593 TonB dependent receptor AMD18_RS14375 PF01431 Peptidase family M13 AMD18_RS14375 PF05649 Peptidase family M13 AMD18_RS14380 PF01431 Peptidase family M13 AMD18_RS14380 PF05649 Peptidase family M13 AMD18_RS14395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD18_RS14400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS14400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD18_RS14405 PF01266 FAD dependent oxidoreductase AMD18_RS14410 PF04235 Protein of unknown function (DUF418) AMD18_RS14415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD18_RS14420 PF00877 NlpC/P60 family AMD18_RS14425 PF00877 NlpC/P60 family AMD18_RS14440 PF00375 Sodium:dicarboxylate symporter family AMD18_RS14445 PF00245 Alkaline phosphatase AMD18_RS14450 PF09179 TilS substrate binding domain AMD18_RS14450 PF01171 PP-loop family AMD18_RS14450 PF11734 TilS substrate C-terminal domain AMD18_RS14455 PF02609 Exonuclease VII small subunit AMD18_RS14460 PF00348 Polyprenyl synthetase AMD18_RS14465 PF14521 Lysine-specific metallo-endopeptidase AMD18_RS14475 PF01523 Putative modulator of DNA gyrase AMD18_RS14480 PF04751 Protein of unknown function (DUF615) AMD18_RS14485 PF01523 Putative modulator of DNA gyrase AMD18_RS14495 PF13502 AsmA-like C-terminal region AMD18_RS14495 PF13116 Protein of unknown function AMD18_RS14500 PF10150 Ribonuclease E/G family AMD18_RS14500 PF00575 S1 RNA binding domain AMD18_RS14505 PF02545 Maf-like protein AMD18_RS14510 PF04402 Protein of unknown function (DUF541) AMD18_RS14525 PF02590 Predicted SPOUT methyltransferase AMD18_RS14540 PF01467 Cytidylyltransferase-like AMD18_RS14555 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD18_RS14555 PF00133 tRNA synthetases class I (I, L, M and V) AMD18_RS14555 PF08264 Anticodon-binding domain of tRNA AMD18_RS14565 PF00085 Thioredoxin AMD18_RS14590 PF04070 Domain of unknown function (DUF378) AMD18_RS14595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD18_RS14605 PF03466 LysR substrate binding domain AMD18_RS14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS14635 PF00664 ABC transporter transmembrane region AMD18_RS14635 PF00005 ABC transporter AMD18_RS14645 PF00873 AcrB/AcrD/AcrF family AMD18_RS14660 PF02321 Outer membrane efflux protein AMD18_RS14665 PF00072 Response regulator receiver domain AMD18_RS14665 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS14670 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS14670 PF00672 HAMP domain AMD18_RS14675 PF00999 Sodium/hydrogen exchanger family AMD18_RS14680 PF00144 Beta-lactamase AMD18_RS14685 PF03737 Aldolase/RraA AMD18_RS14705 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS14710 PF00849 RNA pseudouridylate synthase AMD18_RS14710 PF01479 S4 domain AMD18_RS14715 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS14715 PF08448 PAS fold AMD18_RS14715 PF00563 EAL domain AMD18_RS14720 PF00270 DEAD/DEAH box helicase AMD18_RS14720 PF00271 Helicase conserved C-terminal domain AMD18_RS14720 PF03880 DbpA RNA binding domain AMD18_RS14765 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD18_RS14765 PF06029 AlkA N-terminal domain AMD18_RS14770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD18_RS14770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD18_RS14780 PF00654 Voltage gated chloride channel AMD18_RS14785 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS14785 PF00107 Zinc-binding dehydrogenase AMD18_RS14800 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS14800 PF00593 TonB dependent receptor AMD18_RS14810 PF01483 Proprotein convertase P-domain AMD18_RS14810 PF00082 Subtilase family AMD18_RS14820 PF00082 Subtilase family AMD18_RS14820 PF01483 Proprotein convertase P-domain AMD18_RS14830 PF00248 Aldo/keto reductase family AMD18_RS14835 PF07690 Major Facilitator Superfamily AMD18_RS14840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS14840 PF03466 LysR substrate binding domain AMD18_RS14850 PF06719 AraC-type transcriptional regulator N-terminus AMD18_RS14850 PF12833 Helix-turn-helix domain AMD18_RS14860 PF16859 Tetracyclin repressor-like, C-terminal domain AMD18_RS14860 PF00440 Bacterial regulatory proteins, tetR family AMD18_RS14865 PF02321 Outer membrane efflux protein AMD18_RS14870 PF00873 AcrB/AcrD/AcrF family AMD18_RS14875 PF00529 HlyD membrane-fusion protein of T1SS AMD18_RS14875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS14885 PF01475 Ferric uptake regulator family AMD18_RS14890 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD18_RS14915 PF06123 Inner membrane protein CreD AMD18_RS14925 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS14925 PF00672 HAMP domain AMD18_RS14930 PF00072 Response regulator receiver domain AMD18_RS14930 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS14935 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMD18_RS14945 PF03461 TRCF domain AMD18_RS14945 PF17757 UvrB interaction domain AMD18_RS14945 PF00270 DEAD/DEAH box helicase AMD18_RS14945 PF02559 CarD-like/TRCF domain AMD18_RS14945 PF00271 Helicase conserved C-terminal domain AMD18_RS14980 PF01627 Hpt domain AMD18_RS14980 PF01584 CheW-like domain AMD18_RS14980 PF09078 CheY binding AMD18_RS14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS14980 PF02895 Signal transducing histidine kinase, homodimeric domain AMD18_RS14985 PF02203 Tar ligand binding domain homologue AMD18_RS14985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS14985 PF00672 HAMP domain AMD18_RS14990 PF01584 CheW-like domain AMD18_RS14995 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS14995 PF00563 EAL domain AMD18_RS14995 PF13426 PAS domain AMD18_RS15000 PF01739 CheR methyltransferase, SAM binding domain AMD18_RS15000 PF03705 CheR methyltransferase, all-alpha domain AMD18_RS15005 PF01339 CheB methylesterase AMD18_RS15005 PF00072 Response regulator receiver domain AMD18_RS15010 PF13091 PLD-like domain AMD18_RS15015 PF05649 Peptidase family M13 AMD18_RS15015 PF01431 Peptidase family M13 AMD18_RS15025 PF00300 Histidine phosphatase superfamily (branch 1) AMD18_RS15030 PF04493 Endonuclease V AMD18_RS15040 PF02678 Pirin AMD18_RS15040 PF05726 Pirin C-terminal cupin domain AMD18_RS15055 PF02678 Pirin AMD18_RS15055 PF05726 Pirin C-terminal cupin domain AMD18_RS15060 PF02554 Carbon starvation protein CstA AMD18_RS15060 PF13722 5TM C-terminal transporter carbon starvation CstA AMD18_RS15065 PF04328 Selenoprotein, putative AMD18_RS15110 PF01527 Transposase AMD18_RS15120 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMD18_RS15120 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMD18_RS15125 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMD18_RS15125 PF00941 FAD binding domain in molybdopterin dehydrogenase AMD18_RS15130 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD18_RS15130 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD18_RS15130 PF01799 [2Fe-2S] binding domain AMD18_RS15135 PF08990 Erythronolide synthase docking AMD18_RS15135 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS15135 PF09277 Erythronolide synthase, docking AMD18_RS15135 PF00550 Phosphopantetheine attachment site AMD18_RS15135 PF16197 Ketoacyl-synthetase C-terminal extension AMD18_RS15135 PF14765 Polyketide synthase dehydratase AMD18_RS15135 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD18_RS15135 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD18_RS15135 PF08659 KR domain AMD18_RS15135 PF00698 Acyl transferase domain AMD18_RS15140 PF00563 EAL domain AMD18_RS15140 PF01590 GAF domain AMD18_RS15140 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS15140 PF00360 Phytochrome region AMD18_RS15145 PF00436 Single-strand binding protein family AMD18_RS15150 PF00348 Polyprenyl synthetase AMD18_RS15160 PF02875 Mur ligase family, glutamate ligase domain AMD18_RS15160 PF08245 Mur ligase middle domain AMD18_RS15175 PF01842 ACT domain AMD18_RS15175 PF00696 Amino acid kinase family AMD18_RS15180 PF02567 Phenazine biosynthesis-like protein AMD18_RS15185 PF02567 Phenazine biosynthesis-like protein AMD18_RS15195 PF02566 OsmC-like protein AMD18_RS15200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD18_RS15200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD18_RS15205 PF03652 Holliday junction resolvase AMD18_RS15210 PF02622 Uncharacterized ACR, COG1678 AMD18_RS15220 PF00958 GMP synthase C terminal domain AMD18_RS15220 PF00117 Glutamine amidotransferase class-I AMD18_RS15220 PF13673 Acetyltransferase (GNAT) domain AMD18_RS15220 PF03352 Methyladenine glycosylase AMD18_RS15220 PF13302 Acetyltransferase (GNAT) domain AMD18_RS15230 PF03211 Pectate lyase AMD18_RS15235 PF00437 Type II/IV secretion system protein AMD18_RS15240 PF00437 Type II/IV secretion system protein AMD18_RS15245 PF01168 Alanine racemase, N-terminal domain AMD18_RS15250 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD18_RS15250 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD18_RS15260 PF01551 Peptidase family M23 AMD18_RS15280 PF01965 DJ-1/PfpI family AMD18_RS15290 PF02082 Transcriptional regulator AMD18_RS15295 PF01458 Uncharacterized protein family (UPF0051) AMD18_RS15300 PF00005 ABC transporter AMD18_RS15305 PF01458 Uncharacterized protein family (UPF0051) AMD18_RS15310 PF00266 Aminotransferase class-V AMD18_RS15320 PF00355 Rieske [2Fe-2S] domain AMD18_RS15325 PF00593 TonB dependent receptor AMD18_RS15325 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS15330 PF13640 2OG-Fe(II) oxygenase superfamily AMD18_RS15330 PF18331 PKHD-type hydroxylase C-terminal domain AMD18_RS15355 PF02424 ApbE family AMD18_RS15360 PF00667 FAD binding domain AMD18_RS15360 PF00258 Flavodoxin AMD18_RS15360 PF00175 Oxidoreductase NAD-binding domain AMD18_RS15380 PF07687 Peptidase dimerisation domain AMD18_RS15380 PF01546 Peptidase family M20/M25/M40 AMD18_RS15390 PF01636 Phosphotransferase enzyme family AMD18_RS15395 PF00483 Nucleotidyl transferase AMD18_RS15400 PF00308 Bacterial dnaA protein AMD18_RS15405 PF01594 AI-2E family transporter AMD18_RS15415 PF02769 AIR synthase related protein, C-terminal domain AMD18_RS15415 PF00586 AIR synthase related protein, N-terminal domain AMD18_RS15425 PF00551 Formyl transferase AMD18_RS15445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD18_RS15450 PF01722 BolA-like protein AMD18_RS15455 PF00571 CBS domain AMD18_RS15455 PF01380 SIS domain AMD18_RS15470 PF03968 OstA-like protein AMD18_RS15475 PF00005 ABC transporter AMD18_RS15480 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD18_RS15480 PF04552 Sigma-54, DNA binding domain AMD18_RS15480 PF04963 Sigma-54 factor, core binding domain AMD18_RS15485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD18_RS15490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMD18_RS15495 PF02603 HPr Serine kinase N terminus AMD18_RS15495 PF07475 HPr Serine kinase C-terminal domain AMD18_RS15500 PF03668 P-loop ATPase protein family AMD18_RS15510 PF00381 PTS HPr component phosphorylation site AMD18_RS15515 PF05524 PEP-utilising enzyme, N-terminal AMD18_RS15515 PF00391 PEP-utilising enzyme, mobile domain AMD18_RS15515 PF02896 PEP-utilising enzyme, TIM barrel domain AMD18_RS15520 PF03448 MgtE intracellular N domain AMD18_RS15520 PF01769 Divalent cation transporter AMD18_RS15520 PF00571 CBS domain AMD18_RS15525 PF00756 Putative esterase AMD18_RS15530 PF02322 Cytochrome bd terminal oxidase subunit II AMD18_RS15535 PF01654 Cytochrome bd terminal oxidase subunit I AMD18_RS15545 PF00324 Amino acid permease AMD18_RS15550 PF00544 Pectate lyase AMD18_RS15555 PF00561 alpha/beta hydrolase fold AMD18_RS15565 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS15570 PF00324 Amino acid permease AMD18_RS15590 PF12706 Beta-lactamase superfamily domain AMD18_RS15595 PF04820 Tryptophan halogenase AMD18_RS15620 PF00376 MerR family regulatory protein AMD18_RS15620 PF09278 MerR, DNA binding AMD18_RS15625 PF07690 Major Facilitator Superfamily AMD18_RS15635 PF03738 Glutathionylspermidine synthase preATP-grasp AMD18_RS15660 PF04012 PspA/IM30 family AMD18_RS15670 PF01243 Pyridoxamine 5'-phosphate oxidase AMD18_RS15670 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD18_RS15675 PF01202 Shikimate kinase AMD18_RS15680 PF01761 3-dehydroquinate synthase AMD18_RS15690 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD18_RS15760 PF00158 Sigma-54 interaction domain AMD18_RS15760 PF02954 Bacterial regulatory protein, Fis family AMD18_RS15760 PF01590 GAF domain AMD18_RS15765 PF07690 Major Facilitator Superfamily AMD18_RS15770 PF00072 Response regulator receiver domain AMD18_RS15770 PF00672 HAMP domain AMD18_RS15770 PF01627 Hpt domain AMD18_RS15770 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS15770 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD18_RS15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS15775 PF17149 Periplasmic sensor domain found in signal transduction proteins AMD18_RS15775 PF00672 HAMP domain AMD18_RS15775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS15775 PF00072 Response regulator receiver domain AMD18_RS15775 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS15775 PF01627 Hpt domain AMD18_RS15785 PF01627 Hpt domain AMD18_RS15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS15785 PF00072 Response regulator receiver domain AMD18_RS15785 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS15790 PF04264 YceI-like domain AMD18_RS15810 PF03313 Serine dehydratase alpha chain AMD18_RS15810 PF03315 Serine dehydratase beta chain AMD18_RS15815 PF12697 Alpha/beta hydrolase family AMD18_RS15820 PF03447 Homoserine dehydrogenase, NAD binding domain AMD18_RS15820 PF00742 Homoserine dehydrogenase AMD18_RS15820 PF00696 Amino acid kinase family AMD18_RS15825 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD18_RS15830 PF00561 alpha/beta hydrolase fold AMD18_RS15835 PF01476 LysM domain AMD18_RS15835 PF08525 Opacity-associated protein A N-terminal motif AMD18_RS15835 PF01551 Peptidase family M23 AMD18_RS15840 PF16658 Class II release factor RF3, C-terminal domain AMD18_RS15840 PF00009 Elongation factor Tu GTP binding domain AMD18_RS15845 PF03006 Haemolysin-III related AMD18_RS15850 PF05170 AsmA family AMD18_RS15855 PF00478 IMP dehydrogenase / GMP reductase domain AMD18_RS15855 PF00571 CBS domain AMD18_RS15860 PF00535 Glycosyl transferase family 2 AMD18_RS15865 PF00912 Transglycosylase AMD18_RS15870 PF01430 Hsp33 protein AMD18_RS15880 PF00593 TonB dependent receptor AMD18_RS15880 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS15890 PF00440 Bacterial regulatory proteins, tetR family AMD18_RS15895 PF00561 alpha/beta hydrolase fold AMD18_RS15900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD18_RS15900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD18_RS15900 PF09317 Domain of unknown function (DUF1974) AMD18_RS15925 PF01597 Glycine cleavage H-protein AMD18_RS15930 PF01571 Aminomethyltransferase folate-binding domain AMD18_RS15930 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMD18_RS15940 PF01145 SPFH domain / Band 7 family AMD18_RS15940 PF16200 C-terminal region of band_7 AMD18_RS15945 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMD18_RS15950 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD18_RS15955 PF00459 Inositol monophosphatase family AMD18_RS15960 PF00293 NUDIX domain AMD18_RS15965 PF00202 Aminotransferase class-III AMD18_RS15970 PF04452 RNA methyltransferase AMD18_RS15975 PF02685 Glucokinase AMD18_RS15990 PF01476 LysM domain AMD18_RS15990 PF00704 Glycosyl hydrolases family 18 AMD18_RS15995 PF00728 Glycosyl hydrolase family 20, catalytic domain AMD18_RS15995 PF02838 Glycosyl hydrolase family 20, domain 2 AMD18_RS15995 PF07691 PA14 domain AMD18_RS16005 PF07691 PA14 domain AMD18_RS16005 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD18_RS16005 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD18_RS16005 PF14310 Fibronectin type III-like domain AMD18_RS16015 PF01301 Glycosyl hydrolases family 35 AMD18_RS16020 PF13520 Amino acid permease AMD18_RS16030 PF11975 Family 4 glycosyl hydrolase C-terminal domain AMD18_RS16030 PF02056 Family 4 glycosyl hydrolase AMD18_RS16040 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD18_RS16040 PF07971 Glycosyl hydrolase family 92 AMD18_RS16045 PF01301 Glycosyl hydrolases family 35 AMD18_RS16075 PF03932 CutC family AMD18_RS16080 PF01112 Asparaginase AMD18_RS16090 PF13302 Acetyltransferase (GNAT) domain AMD18_RS16105 PF01627 Hpt domain AMD18_RS16105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS16105 PF02895 Signal transducing histidine kinase, homodimeric domain AMD18_RS16105 PF01584 CheW-like domain AMD18_RS16105 PF00072 Response regulator receiver domain AMD18_RS16110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS16110 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMD18_RS16115 PF01584 CheW-like domain AMD18_RS16120 PF00072 Response regulator receiver domain AMD18_RS16125 PF00072 Response regulator receiver domain AMD18_RS16130 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD18_RS16130 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD18_RS16140 PF03747 ADP-ribosylglycohydrolase AMD18_RS16145 PF00814 Glycoprotease family AMD18_RS16150 PF04851 Type III restriction enzyme, res subunit AMD18_RS16150 PF13307 Helicase C-terminal domain AMD18_RS16160 PF00912 Transglycosylase AMD18_RS16160 PF14814 Bifunctional transglycosylase second domain AMD18_RS16160 PF00905 Penicillin binding protein transpeptidase domain AMD18_RS16165 PF00535 Glycosyl transferase family 2 AMD18_RS16175 PF13291 ACT domain AMD18_RS16175 PF02824 TGS domain AMD18_RS16175 PF04607 Region found in RelA / SpoT proteins AMD18_RS16180 PF12706 Beta-lactamase superfamily domain AMD18_RS16185 PF03070 TENA/THI-4/PQQC family AMD18_RS16190 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMD18_RS16195 PF13186 Iron-sulfur cluster-binding domain AMD18_RS16195 PF04055 Radical SAM superfamily AMD18_RS16210 PF02685 Glucokinase AMD18_RS16220 PF11898 Domain of unknown function (DUF3418) AMD18_RS16220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD18_RS16220 PF00271 Helicase conserved C-terminal domain AMD18_RS16220 PF04408 Helicase associated domain (HA2) AMD18_RS16220 PF00270 DEAD/DEAH box helicase AMD18_RS16225 PF00210 Ferritin-like domain AMD18_RS16230 PF00271 Helicase conserved C-terminal domain AMD18_RS16230 PF00570 HRDC domain AMD18_RS16230 PF16124 RecQ zinc-binding AMD18_RS16230 PF09382 RQC domain AMD18_RS16230 PF00270 DEAD/DEAH box helicase AMD18_RS16265 PF02203 Tar ligand binding domain homologue AMD18_RS16265 PF00672 HAMP domain AMD18_RS16265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS16270 PF01810 LysE type translocator AMD18_RS16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS16275 PF03466 LysR substrate binding domain AMD18_RS16285 PF13426 PAS domain AMD18_RS16285 PF07536 HWE histidine kinase AMD18_RS16285 PF13581 Histidine kinase-like ATPase domain AMD18_RS16290 PF06508 Queuosine biosynthesis protein QueC AMD18_RS16300 PF04055 Radical SAM superfamily AMD18_RS16310 PF00691 OmpA family AMD18_RS16315 PF07676 WD40-like Beta Propeller Repeat AMD18_RS16315 PF04052 TolB amino-terminal domain AMD18_RS16325 PF02472 Biopolymer transport protein ExbD/TolR AMD18_RS16330 PF01618 MotA/TolQ/ExbB proton channel family AMD18_RS16335 PF03061 Thioesterase superfamily AMD18_RS16340 PF17864 RuvB AAA lid domain AMD18_RS16340 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMD18_RS16340 PF05491 RuvB C-terminal winged helix domain AMD18_RS16350 PF02705 K+ potassium transporter AMD18_RS16355 PF01330 RuvA N terminal domain AMD18_RS16355 PF07499 RuvA, C-terminal domain AMD18_RS16360 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD18_RS16365 PF01709 Transcriptional regulator AMD18_RS16380 PF00152 tRNA synthetases class II (D, K and N) AMD18_RS16380 PF01336 OB-fold nucleic acid binding domain AMD18_RS16380 PF02938 GAD domain AMD18_RS16395 PF07690 Major Facilitator Superfamily AMD18_RS16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS16420 PF03466 LysR substrate binding domain AMD18_RS16430 PF12848 ABC transporter AMD18_RS16430 PF00005 ABC transporter AMD18_RS16435 PF00593 TonB dependent receptor AMD18_RS16435 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS16450 PF00593 TonB dependent receptor AMD18_RS16450 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS16455 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS16455 PF00593 TonB dependent receptor AMD18_RS16460 PF00067 Cytochrome P450 AMD18_RS16465 PF02254 TrkA-N domain AMD18_RS16465 PF00999 Sodium/hydrogen exchanger family AMD18_RS16490 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS16490 PF07660 Secretin and TonB N terminus short domain AMD18_RS16490 PF00593 TonB dependent receptor AMD18_RS16500 PF04183 IucA / IucC family AMD18_RS16500 PF06276 Ferric iron reductase FhuF-like transporter AMD18_RS16505 PF07690 Major Facilitator Superfamily AMD18_RS16510 PF06276 Ferric iron reductase FhuF-like transporter AMD18_RS16510 PF04183 IucA / IucC family AMD18_RS16515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD18_RS16515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD18_RS16530 PF02654 Cobalamin-5-phosphate synthase AMD18_RS16540 PF02277 Phosphoribosyltransferase AMD18_RS16545 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMD18_RS16550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD18_RS16550 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD18_RS16555 PF00155 Aminotransferase class I and II AMD18_RS16560 PF17113 Regulatory signalling modulator protein AmpE AMD18_RS16560 PF03186 CobD/Cbib protein AMD18_RS16565 PF12557 Cob(I)alamin adenosyltransferase N terminal AMD18_RS16565 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMD18_RS16580 PF00593 TonB dependent receptor AMD18_RS16580 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS16585 PF02861 Clp amino terminal domain, pathogenicity island component AMD18_RS16585 PF10431 C-terminal, D2-small domain, of ClpB protein AMD18_RS16585 PF17871 AAA lid domain AMD18_RS16585 PF07724 AAA domain (Cdc48 subfamily) AMD18_RS16585 PF00004 ATPase family associated with various cellular activities (AAA) AMD18_RS16590 PF00005 ABC transporter AMD18_RS16595 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS16600 PF09084 NMT1/THI5 like AMD18_RS16605 PF00248 Aldo/keto reductase family AMD18_RS16610 PF00296 Luciferase-like monooxygenase AMD18_RS16615 PF00593 TonB dependent receptor AMD18_RS16615 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS16620 PF01541 GIY-YIG catalytic domain AMD18_RS16655 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS16655 PF00593 TonB dependent receptor AMD18_RS16660 PF02358 Trehalose-phosphatase AMD18_RS16665 PF00723 Glycosyl hydrolases family 15 AMD18_RS16670 PF00982 Glycosyltransferase family 20 AMD18_RS16675 PF01011 PQQ enzyme repeat AMD18_RS16680 PF00672 HAMP domain AMD18_RS16680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS16680 PF02203 Tar ligand binding domain homologue AMD18_RS16685 PF04134 Protein of unknown function, DUF393 AMD18_RS16695 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD18_RS16700 PF00849 RNA pseudouridylate synthase AMD18_RS16705 PF13525 Outer membrane lipoprotein AMD18_RS16715 PF00795 Carbon-nitrogen hydrolase AMD18_RS16715 PF02540 NAD synthase AMD18_RS16745 PF13406 Transglycosylase SLT domain AMD18_RS16750 PF01526 Tn3 transposase DDE domain AMD18_RS16750 PF13700 Domain of unknown function (DUF4158) AMD18_RS16770 PF01129 NAD:arginine ADP-ribosyltransferase AMD18_RS16795 PF02629 CoA binding domain AMD18_RS16795 PF00549 CoA-ligase AMD18_RS16800 PF08442 ATP-grasp domain AMD18_RS16800 PF00549 CoA-ligase AMD18_RS16805 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS16810 PF00158 Sigma-54 interaction domain AMD18_RS16810 PF00072 Response regulator receiver domain AMD18_RS16810 PF02954 Bacterial regulatory protein, Fis family AMD18_RS16815 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD18_RS16815 PF00437 Type II/IV secretion system protein AMD18_RS16820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD18_RS16820 PF00437 Type II/IV secretion system protein AMD18_RS16825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD18_RS16825 PF00437 Type II/IV secretion system protein AMD18_RS16830 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS16830 PF00114 Pilin (bacterial filament) AMD18_RS16835 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS16835 PF00114 Pilin (bacterial filament) AMD18_RS16840 PF00482 Type II secretion system (T2SS), protein F AMD18_RS16845 PF06750 Bacterial Peptidase A24 N-terminal domain AMD18_RS16845 PF01478 Type IV leader peptidase family AMD18_RS16850 PF01121 Dephospho-CoA kinase AMD18_RS16870 PF13276 HTH-like domain AMD18_RS16870 PF13333 Integrase core domain AMD18_RS16870 PF00665 Integrase core domain AMD18_RS16875 PF00989 PAS fold AMD18_RS16875 PF16736 Single Cache-like AMD18_RS16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS16875 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS16880 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS16880 PF00072 Response regulator receiver domain AMD18_RS16890 PF08443 RimK-like ATP-grasp domain AMD18_RS16890 PF18030 RimK PreATP-grasp domain AMD18_RS16895 PF00128 Alpha amylase, catalytic domain AMD18_RS16895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD18_RS16950 PF04002 RadC-like JAB domain AMD18_RS16975 PF13426 PAS domain AMD18_RS16975 PF00072 Response regulator receiver domain AMD18_RS16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS16980 PF13426 PAS domain AMD18_RS16980 PF00072 Response regulator receiver domain AMD18_RS17020 PF01527 Transposase AMD18_RS17065 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS17065 PF08448 PAS fold AMD18_RS17065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS17065 PF13188 PAS domain AMD18_RS17065 PF00072 Response regulator receiver domain AMD18_RS17090 PF13676 TIR domain AMD18_RS17105 PF00657 GDSL-like Lipase/Acylhydrolase AMD18_RS17105 PF03797 Autotransporter beta-domain AMD18_RS17115 PF05690 Thiazole biosynthesis protein ThiG AMD18_RS17120 PF02390 Putative methyltransferase AMD18_RS17125 PF02080 TrkA-C domain AMD18_RS17125 PF03600 Citrate transporter AMD18_RS17140 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD18_RS17145 PF01741 Large-conductance mechanosensitive channel, MscL AMD18_RS17160 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS17170 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AMD18_RS17170 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD18_RS17170 PF00703 Glycosyl hydrolases family 2 AMD18_RS17175 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMD18_RS17175 PF10566 Glycoside hydrolase 97 AMD18_RS17175 PF14508 Glycosyl-hydrolase 97 N-terminal AMD18_RS17185 PF00135 Carboxylesterase family AMD18_RS17190 PF00588 SpoU rRNA Methylase family AMD18_RS17190 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD18_RS17200 PF01433 Peptidase family M1 domain AMD18_RS17200 PF11838 ERAP1-like C-terminal domain AMD18_RS17250 PF00873 AcrB/AcrD/AcrF family AMD18_RS17255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS17255 PF00529 HlyD membrane-fusion protein of T1SS AMD18_RS17260 PF00009 Elongation factor Tu GTP binding domain AMD18_RS17265 PF01507 Phosphoadenosine phosphosulfate reductase family AMD18_RS17270 PF00667 FAD binding domain AMD18_RS17270 PF00175 Oxidoreductase NAD-binding domain AMD18_RS17270 PF00258 Flavodoxin AMD18_RS17275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD18_RS17275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD18_RS17280 PF01507 Phosphoadenosine phosphosulfate reductase family AMD18_RS17300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS17300 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS17300 PF01627 Hpt domain AMD18_RS17300 PF00072 Response regulator receiver domain AMD18_RS17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS17315 PF03466 LysR substrate binding domain AMD18_RS17320 PF10414 Sirohaem synthase dimerisation region AMD18_RS17320 PF14824 Sirohaem biosynthesis protein central AMD18_RS17320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD18_RS17325 PF00291 Pyridoxal-phosphate dependent enzyme AMD18_RS17335 PF01661 Macro domain AMD18_RS17340 PF00274 Fructose-bisphosphate aldolase class-I AMD18_RS17345 PF02887 Pyruvate kinase, alpha/beta domain AMD18_RS17345 PF00224 Pyruvate kinase, barrel domain AMD18_RS17350 PF13419 Haloacid dehalogenase-like hydrolase AMD18_RS17355 PF00162 Phosphoglycerate kinase AMD18_RS17375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD18_RS17375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD18_RS17385 PF03922 OmpW family AMD18_RS17390 PF03922 OmpW family AMD18_RS17400 PF04273 Putative phosphatase (DUF442) AMD18_RS17400 PF00753 Metallo-beta-lactamase superfamily AMD18_RS17410 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS17415 PF00005 ABC transporter AMD18_RS17415 PF03459 TOBE domain AMD18_RS17450 PF01476 LysM domain AMD18_RS17450 PF03734 L,D-transpeptidase catalytic domain AMD18_RS17455 PF04225 Opacity-associated protein A LysM-like domain AMD18_RS17455 PF01551 Peptidase family M23 AMD18_RS17465 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS17465 PF00593 TonB dependent receptor AMD18_RS17485 PF00456 Transketolase, thiamine diphosphate binding domain AMD18_RS17485 PF02780 Transketolase, C-terminal domain AMD18_RS17485 PF02779 Transketolase, pyrimidine binding domain AMD18_RS17490 PF00375 Sodium:dicarboxylate symporter family AMD18_RS17500 PF00092 von Willebrand factor type A domain AMD18_RS17500 PF07584 Aerotolerance regulator N-terminal AMD18_RS17520 PF17863 AAA lid domain AMD18_RS17520 PF07726 ATPase family associated with various cellular activities (AAA) AMD18_RS17525 PF07660 Secretin and TonB N terminus short domain AMD18_RS17525 PF03958 Bacterial type II/III secretion system short domain AMD18_RS17525 PF00263 Bacterial type II and III secretion system protein AMD18_RS17525 PF11741 AMIN domain AMD18_RS17530 PF04351 Pilus assembly protein, PilP AMD18_RS17535 PF04350 Pilus assembly protein, PilO AMD18_RS17540 PF05137 Fimbrial assembly protein (PilN) AMD18_RS17545 PF11104 Type IV pilus assembly protein PilM; AMD18_RS17550 PF00905 Penicillin binding protein transpeptidase domain AMD18_RS17550 PF00912 Transglycosylase AMD18_RS17550 PF17092 Penicillin-binding protein OB-like domain AMD18_RS17560 PF00285 Citrate synthase, C-terminal domain AMD18_RS17565 PF01197 Ribosomal protein L31 AMD18_RS17570 PF01156 Inosine-uridine preferring nucleoside hydrolase AMD18_RS17575 PF00271 Helicase conserved C-terminal domain AMD18_RS17575 PF00270 DEAD/DEAH box helicase AMD18_RS17575 PF17191 RecG wedge domain AMD18_RS17580 PF01042 Endoribonuclease L-PSP AMD18_RS17585 PF02824 TGS domain AMD18_RS17585 PF04607 Region found in RelA / SpoT proteins AMD18_RS17585 PF13291 ACT domain AMD18_RS17590 PF01192 RNA polymerase Rpb6 AMD18_RS17595 PF00625 Guanylate kinase AMD18_RS17600 PF08340 Domain of unknown function (DUF1732) AMD18_RS17600 PF03755 YicC-like family, N-terminal region AMD18_RS17605 PF03725 3' exoribonuclease family, domain 2 AMD18_RS17605 PF01138 3' exoribonuclease family, domain 1 AMD18_RS17615 PF01725 Ham1 family AMD18_RS17620 PF04055 Radical SAM superfamily AMD18_RS17620 PF06969 HemN C-terminal domain AMD18_RS17635 PF00557 Metallopeptidase family M24 AMD18_RS17645 PF00557 Metallopeptidase family M24 AMD18_RS17645 PF05195 Aminopeptidase P, N-terminal domain AMD18_RS17650 PF03695 Uncharacterised protein family (UPF0149) AMD18_RS17660 PF05164 Cell division protein ZapA AMD18_RS17665 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD18_RS17675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD18_RS17685 PF13369 Transglutaminase-like superfamily AMD18_RS17690 PF00301 Rubredoxin AMD18_RS17695 PF02581 Thiamine monophosphate synthase AMD18_RS17710 PF00202 Aminotransferase class-III AMD18_RS17715 PF17874 MalT-like TPR region AMD18_RS17715 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS17720 PF00127 Copper binding proteins, plastocyanin/azurin family AMD18_RS17725 PF00155 Aminotransferase class I and II AMD18_RS17735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMD18_RS17735 PF00034 Cytochrome c AMD18_RS17740 PF01593 Flavin containing amine oxidoreductase AMD18_RS17755 PF00202 Aminotransferase class-III AMD18_RS17760 PF00027 Cyclic nucleotide-binding domain AMD18_RS17760 PF00520 Ion transport protein AMD18_RS17775 PF01569 PAP2 superfamily AMD18_RS17780 PF01062 Bestrophin, RFP-TM, chloride channel AMD18_RS17790 PF02875 Mur ligase family, glutamate ligase domain AMD18_RS17790 PF01225 Mur ligase family, catalytic domain AMD18_RS17790 PF08245 Mur ligase middle domain AMD18_RS17800 PF00365 Phosphofructokinase AMD18_RS17810 PF03030 Inorganic H+ pyrophosphatase AMD18_RS17820 PF00719 Inorganic pyrophosphatase AMD18_RS17830 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS17830 PF00593 TonB dependent receptor AMD18_RS17835 PF12833 Helix-turn-helix domain AMD18_RS17840 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS17840 PF18500 CadC C-terminal domain 1 AMD18_RS17845 PF13667 ThiC-associated domain AMD18_RS17845 PF01964 Radical SAM ThiC family AMD18_RS17850 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS17850 PF00593 TonB dependent receptor AMD18_RS17855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS17855 PF00672 HAMP domain AMD18_RS17865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMD18_RS17865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD18_RS17870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD18_RS17870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD18_RS17870 PF00205 Thiamine pyrophosphate enzyme, central domain AMD18_RS17880 PF00291 Pyridoxal-phosphate dependent enzyme AMD18_RS17885 PF08502 LeuA allosteric (dimerisation) domain AMD18_RS17885 PF00682 HMGL-like AMD18_RS17890 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD18_RS17895 PF00694 Aconitase C-terminal domain AMD18_RS17900 PF00330 Aconitase family (aconitate hydratase) AMD18_RS17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS17910 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS17925 PF02321 Outer membrane efflux protein AMD18_RS17930 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD18_RS17935 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD18_RS17960 PF03949 Malic enzyme, NAD binding domain AMD18_RS17960 PF01515 Phosphate acetyl/butaryl transferase AMD18_RS17960 PF00390 Malic enzyme, N-terminal domain AMD18_RS17965 PF00375 Sodium:dicarboxylate symporter family AMD18_RS17975 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS17975 PF02743 Cache domain AMD18_RS17980 PF07690 Major Facilitator Superfamily AMD18_RS17990 PF03466 LysR substrate binding domain AMD18_RS17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS17995 PF00248 Aldo/keto reductase family AMD18_RS18010 PF00072 Response regulator receiver domain AMD18_RS18010 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS18020 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS18020 PF08521 Two-component sensor kinase N-terminal AMD18_RS18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS18025 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS18025 PF00072 Response regulator receiver domain AMD18_RS18035 PF03600 Citrate transporter AMD18_RS18040 PF00106 short chain dehydrogenase AMD18_RS18045 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS18060 PF00128 Alpha amylase, catalytic domain AMD18_RS18075 PF03193 RsgA GTPase AMD18_RS18080 PF00155 Aminotransferase class I and II AMD18_RS18095 PF00593 TonB dependent receptor AMD18_RS18095 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS18100 PF01522 Polysaccharide deacetylase AMD18_RS18105 PF00462 Glutaredoxin AMD18_RS18120 PF01527 Transposase AMD18_RS18140 PF02645 Uncharacterised protein, DegV family COG1307 AMD18_RS18145 PF01327 Polypeptide deformylase AMD18_RS18150 PF03960 ArsC family AMD18_RS18165 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AMD18_RS18170 PF01270 Glycosyl hydrolases family 8 AMD18_RS18175 PF03170 Bacterial cellulose synthase subunit AMD18_RS18180 PF03552 Cellulose synthase AMD18_RS18180 PF07238 PilZ domain AMD18_RS18180 PF00535 Glycosyl transferase family 2 AMD18_RS18195 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMD18_RS18195 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD18_RS18240 PF00593 TonB dependent receptor AMD18_RS18240 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS18250 PF00392 Bacterial regulatory proteins, gntR family AMD18_RS18250 PF07702 UTRA domain AMD18_RS18260 PF03958 Bacterial type II/III secretion system short domain AMD18_RS18260 PF00263 Bacterial type II and III secretion system protein AMD18_RS18270 PF10741 Type II secretion system (T2SS), protein M subtype b AMD18_RS18275 PF05137 Fimbrial assembly protein (PilN) AMD18_RS18280 PF03934 Type II secretion system (T2SS), protein K AMD18_RS18290 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS18295 PF12019 Type II transport protein GspH AMD18_RS18300 PF08334 Type II secretion system (T2SS), protein G AMD18_RS18305 PF00482 Type II secretion system (T2SS), protein F AMD18_RS18310 PF00437 Type II/IV secretion system protein AMD18_RS18310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD18_RS18315 PF00082 Subtilase family AMD18_RS18315 PF04151 Bacterial pre-peptidase C-terminal domain AMD18_RS18320 PF13018 Extended Signal Peptide of Type V secretion system AMD18_RS18320 PF05658 Head domain of trimeric autotransporter adhesin AMD18_RS18320 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD18_RS18320 PF03895 YadA-like membrane anchor domain AMD18_RS18325 PF04151 Bacterial pre-peptidase C-terminal domain AMD18_RS18325 PF00082 Subtilase family AMD18_RS18330 PF03895 YadA-like membrane anchor domain AMD18_RS18330 PF13018 Extended Signal Peptide of Type V secretion system AMD18_RS18330 PF05658 Head domain of trimeric autotransporter adhesin AMD18_RS18330 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD18_RS18340 PF02769 AIR synthase related protein, C-terminal domain AMD18_RS18340 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMD18_RS18340 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMD18_RS18345 PF10411 Disulfide bond isomerase protein N-terminus AMD18_RS18345 PF13098 Thioredoxin-like domain AMD18_RS18350 PF02899 Phage integrase, N-terminal SAM-like domain AMD18_RS18350 PF00589 Phage integrase family AMD18_RS18365 PF03739 Lipopolysaccharide export system permease LptF/LptG AMD18_RS18375 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD18_RS18375 PF00883 Cytosol aminopeptidase family, catalytic domain AMD18_RS18390 PF10458 Valyl tRNA synthetase tRNA binding arm AMD18_RS18390 PF00133 tRNA synthetases class I (I, L, M and V) AMD18_RS18390 PF08264 Anticodon-binding domain of tRNA AMD18_RS18395 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS18395 PF00593 TonB dependent receptor AMD18_RS18400 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AMD18_RS18400 PF01464 Transglycosylase SLT domain AMD18_RS18405 PF00544 Pectate lyase AMD18_RS18420 PF01066 CDP-alcohol phosphatidyltransferase AMD18_RS18430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD18_RS18430 PF04073 Aminoacyl-tRNA editing domain AMD18_RS18430 PF03129 Anticodon binding domain AMD18_RS18435 PF00816 H-NS histone family AMD18_RS18445 PF02405 Permease MlaE AMD18_RS18450 PF00005 ABC transporter AMD18_RS18455 PF03886 ABC-type transport auxiliary lipoprotein component AMD18_RS18455 PF02470 MlaD protein AMD18_RS18475 PF05045 Rhamnan synthesis protein F AMD18_RS18475 PF14307 Glycosyltransferase WbsX AMD18_RS18480 PF01144 Coenzyme A transferase AMD18_RS18485 PF01144 Coenzyme A transferase AMD18_RS18490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD18_RS18490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD18_RS18490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD18_RS18490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD18_RS18495 PF01050 Mannose-6-phosphate isomerase AMD18_RS18495 PF00483 Nucleotidyl transferase AMD18_RS18500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD18_RS18500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD18_RS18500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD18_RS18505 PF04321 RmlD substrate binding domain AMD18_RS18510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD18_RS18515 PF00483 Nucleotidyl transferase AMD18_RS18520 PF16363 GDP-mannose 4,6 dehydratase AMD18_RS18525 PF01012 Electron transfer flavoprotein domain AMD18_RS18530 PF01012 Electron transfer flavoprotein domain AMD18_RS18530 PF00766 Electron transfer flavoprotein FAD-binding domain AMD18_RS18540 PF01040 UbiA prenyltransferase family AMD18_RS18545 PF04030 D-arabinono-1,4-lactone oxidase AMD18_RS18545 PF01565 FAD binding domain AMD18_RS18550 PF00106 short chain dehydrogenase AMD18_RS18560 PF01370 NAD dependent epimerase/dehydratase family AMD18_RS18565 PF01593 Flavin containing amine oxidoreductase AMD18_RS18590 PF00535 Glycosyl transferase family 2 AMD18_RS18600 PF00005 ABC transporter AMD18_RS18600 PF14524 Wzt C-terminal domain AMD18_RS18610 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD18_RS18615 PF00571 CBS domain AMD18_RS18615 PF00291 Pyridoxal-phosphate dependent enzyme AMD18_RS18635 PF00437 Type II/IV secretion system protein AMD18_RS18645 PF14497 Glutathione S-transferase, C-terminal domain AMD18_RS18645 PF02798 Glutathione S-transferase, N-terminal domain AMD18_RS18655 PF00271 Helicase conserved C-terminal domain AMD18_RS18655 PF00270 DEAD/DEAH box helicase AMD18_RS18665 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS18665 PF00593 TonB dependent receptor AMD18_RS18670 PF01242 6-pyruvoyl tetrahydropterin synthase AMD18_RS18690 PF13185 GAF domain AMD18_RS18700 PF00756 Putative esterase AMD18_RS18705 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS18705 PF00593 TonB dependent receptor AMD18_RS18710 PF13419 Haloacid dehalogenase-like hydrolase AMD18_RS18715 PF00817 impB/mucB/samB family AMD18_RS18715 PF11799 impB/mucB/samB family C-terminal domain AMD18_RS18720 PF07977 FabA-like domain AMD18_RS18725 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD18_RS18725 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD18_RS18735 PF01432 Peptidase family M3 AMD18_RS18750 PF07732 Multicopper oxidase AMD18_RS18750 PF00394 Multicopper oxidase AMD18_RS18750 PF07731 Multicopper oxidase AMD18_RS18755 PF05275 Copper resistance protein B precursor (CopB) AMD18_RS18760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD18_RS18785 PF01380 SIS domain AMD18_RS18790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS18795 PF12704 MacB-like periplasmic core domain AMD18_RS18795 PF00005 ABC transporter AMD18_RS18795 PF02687 FtsX-like permease family AMD18_RS18800 PF12704 MacB-like periplasmic core domain AMD18_RS18800 PF02687 FtsX-like permease family AMD18_RS18800 PF00005 ABC transporter AMD18_RS18805 PF02687 FtsX-like permease family AMD18_RS18805 PF12704 MacB-like periplasmic core domain AMD18_RS18815 PF00158 Sigma-54 interaction domain AMD18_RS18815 PF00072 Response regulator receiver domain AMD18_RS18815 PF02954 Bacterial regulatory protein, Fis family AMD18_RS18820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS18820 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS18825 PF12804 MobA-like NTP transferase domain AMD18_RS18825 PF00132 Bacterial transferase hexapeptide (six repeats) AMD18_RS18825 PF14602 Hexapeptide repeat of succinyl-transferase AMD18_RS18840 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD18_RS18840 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD18_RS18845 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD18_RS18845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD18_RS18850 PF00231 ATP synthase AMD18_RS18855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD18_RS18855 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD18_RS18855 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD18_RS18860 PF00213 ATP synthase delta (OSCP) subunit AMD18_RS18865 PF00430 ATP synthase B/B' CF(0) AMD18_RS18870 PF00137 ATP synthase subunit C AMD18_RS18875 PF00119 ATP synthase A chain AMD18_RS18895 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS18895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD18_RS18905 PF00364 Biotin-requiring enzyme AMD18_RS18905 PF02817 e3 binding domain AMD18_RS18905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD18_RS18945 PF03180 NLPA lipoprotein AMD18_RS18950 PF00528 Binding-protein-dependent transport system inner membrane component AMD18_RS18955 PF00005 ABC transporter AMD18_RS18955 PF09383 NIL domain AMD18_RS18960 PF00892 EamA-like transporter family AMD18_RS18965 PF04461 Protein of unknown function (DUF520) AMD18_RS18975 PF00072 Response regulator receiver domain AMD18_RS18975 PF00989 PAS fold AMD18_RS18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS18975 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS18975 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMD18_RS18975 PF01627 Hpt domain AMD18_RS19000 PF13419 Haloacid dehalogenase-like hydrolase AMD18_RS19005 PF00849 RNA pseudouridylate synthase AMD18_RS19005 PF01479 S4 domain AMD18_RS19010 PF05175 Methyltransferase small domain AMD18_RS19010 PF08468 Methyltransferase small domain N-terminal AMD18_RS19020 PF07995 Glucose / Sorbosone dehydrogenase AMD18_RS19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS19030 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS19030 PF00989 PAS fold AMD18_RS19050 PF00842 Alanine racemase, C-terminal domain AMD18_RS19050 PF01168 Alanine racemase, N-terminal domain AMD18_RS19055 PF01266 FAD dependent oxidoreductase AMD18_RS19060 PF01037 Lrp/AsnC ligand binding domain AMD18_RS19070 PF01641 SelR domain AMD18_RS19080 PF01618 MotA/TolQ/ExbB proton channel family AMD18_RS19085 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMD18_RS19085 PF00691 OmpA family AMD18_RS19110 PF01061 ABC-2 type transporter AMD18_RS19115 PF00005 ABC transporter AMD18_RS19120 PF00999 Sodium/hydrogen exchanger family AMD18_RS19125 PF02469 Fasciclin domain AMD18_RS19130 PF03167 Uracil DNA glycosylase superfamily AMD18_RS19140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD18_RS19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS19150 PF03466 LysR substrate binding domain AMD18_RS19155 PF03358 NADPH-dependent FMN reductase AMD18_RS19160 PF00248 Aldo/keto reductase family AMD18_RS19170 PF05649 Peptidase family M13 AMD18_RS19170 PF01431 Peptidase family M13 AMD18_RS19190 PF13520 Amino acid permease AMD18_RS19200 PF00072 Response regulator receiver domain AMD18_RS19200 PF04397 LytTr DNA-binding domain AMD18_RS19205 PF00672 HAMP domain AMD18_RS19205 PF06580 Histidine kinase AMD18_RS19205 PF02743 Cache domain AMD18_RS19205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS19220 PF05974 Domain of unknown function (DUF892) AMD18_RS19225 PF05067 Manganese containing catalase AMD18_RS19245 PF08448 PAS fold AMD18_RS19245 PF03705 CheR methyltransferase, all-alpha domain AMD18_RS19245 PF01739 CheR methyltransferase, SAM binding domain AMD18_RS19245 PF01339 CheB methylesterase AMD18_RS19260 PF00072 Response regulator receiver domain AMD18_RS19260 PF00158 Sigma-54 interaction domain AMD18_RS19260 PF02954 Bacterial regulatory protein, Fis family AMD18_RS19270 PF01654 Cytochrome bd terminal oxidase subunit I AMD18_RS19275 PF02322 Cytochrome bd terminal oxidase subunit II AMD18_RS19295 PF16363 GDP-mannose 4,6 dehydratase AMD18_RS19305 PF03275 UDP-galactopyranose mutase AMD18_RS19315 PF00005 ABC transporter AMD18_RS19315 PF00664 ABC transporter transmembrane region AMD18_RS19330 PF00107 Zinc-binding dehydrogenase AMD18_RS19330 PF13823 Alcohol dehydrogenase GroES-associated AMD18_RS19330 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS19375 PF00593 TonB dependent receptor AMD18_RS19375 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS19390 PF00005 ABC transporter AMD18_RS19400 PF03466 LysR substrate binding domain AMD18_RS19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS19405 PF01042 Endoribonuclease L-PSP AMD18_RS19415 PF01527 Transposase AMD18_RS19435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD18_RS19435 PF00672 HAMP domain AMD18_RS19435 PF02203 Tar ligand binding domain homologue AMD18_RS19450 PF03466 LysR substrate binding domain AMD18_RS19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS19455 PF02525 Flavodoxin-like fold AMD18_RS19495 PF00557 Metallopeptidase family M24 AMD18_RS19515 PF04546 Sigma-70, non-essential region AMD18_RS19515 PF04545 Sigma-70, region 4 AMD18_RS19515 PF04539 Sigma-70 region 3 AMD18_RS19515 PF04542 Sigma-70 region 2 AMD18_RS19515 PF00140 Sigma-70 factor, region 1.2 AMD18_RS19515 PF03979 Sigma-70 factor, region 1.1 AMD18_RS19520 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD18_RS19525 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD18_RS19540 PF00925 GTP cyclohydrolase II AMD18_RS19560 PF00535 Glycosyl transferase family 2 AMD18_RS19575 PF01029 NusB family AMD18_RS19575 PF01189 16S rRNA methyltransferase RsmB/F AMD18_RS19580 PF00551 Formyl transferase AMD18_RS19580 PF02911 Formyl transferase, C-terminal domain AMD18_RS19585 PF01327 Polypeptide deformylase AMD18_RS19590 PF01476 LysM domain AMD18_RS19595 PF02481 DNA recombination-mediator protein A AMD18_RS19595 PF17782 DprA winged helix domain AMD18_RS19600 PF04361 Protein of unknown function (DUF494) AMD18_RS19605 PF00114 Pilin (bacterial filament) AMD18_RS19605 PF07963 Prokaryotic N-terminal methylation motif AMD18_RS19615 PF13368 Topoisomerase C-terminal repeat AMD18_RS19615 PF01751 Toprim domain AMD18_RS19615 PF01131 DNA topoisomerase AMD18_RS19620 PF01300 Telomere recombination AMD18_RS19645 PF01343 Peptidase family S49 AMD18_RS19650 PF01554 MatE AMD18_RS19670 PF00270 DEAD/DEAH box helicase AMD18_RS19670 PF00271 Helicase conserved C-terminal domain AMD18_RS19670 PF17764 3′ DNA-binding domain (3′BD) AMD18_RS19670 PF18074 Primosomal protein N C-terminal domain AMD18_RS19670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMD18_RS19675 PF00043 Glutathione S-transferase, C-terminal domain AMD18_RS19675 PF13417 Glutathione S-transferase, N-terminal domain AMD18_RS19690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD18_RS19695 PF03458 UPF0126 domain AMD18_RS19700 PF04545 Sigma-70, region 4 AMD18_RS19700 PF04542 Sigma-70 region 2 AMD18_RS19705 PF03167 Uracil DNA glycosylase superfamily AMD18_RS19710 PF00072 Response regulator receiver domain AMD18_RS19710 PF01339 CheB methylesterase AMD18_RS19715 PF18075 FtsX extracellular domain AMD18_RS19720 PF00005 ABC transporter AMD18_RS19725 PF00271 Helicase conserved C-terminal domain AMD18_RS19725 PF12300 ATP-dependent RNA helicase RhlB AMD18_RS19725 PF00270 DEAD/DEAH box helicase AMD18_RS19730 PF00085 Thioredoxin AMD18_RS19735 PF07497 Rho termination factor, RNA-binding domain AMD18_RS19735 PF07498 Rho termination factor, N-terminal domain AMD18_RS19735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD18_RS19740 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMD18_RS19745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS19745 PF03466 LysR substrate binding domain AMD18_RS19755 PF03971 Monomeric isocitrate dehydrogenase AMD18_RS19770 PF09704 CRISPR-associated protein (Cas_Cas5) AMD18_RS19790 PF01867 CRISPR associated protein Cas1 AMD18_RS19795 PF09827 CRISPR associated protein Cas2 AMD18_RS19805 PF04972 BON domain AMD18_RS19805 PF01476 LysM domain AMD18_RS19810 PF14489 QueF-like protein AMD18_RS19810 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD18_RS19815 PF01546 Peptidase family M20/M25/M40 AMD18_RS19815 PF07687 Peptidase dimerisation domain AMD18_RS19820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS19825 PF00873 AcrB/AcrD/AcrF family AMD18_RS19830 PF00873 AcrB/AcrD/AcrF family AMD18_RS19835 PF07063 Domain of unknown function (DUF1338) AMD18_RS19875 PF01427 D-ala-D-ala dipeptidase AMD18_RS19880 PF01510 N-acetylmuramoyl-L-alanine amidase AMD18_RS19890 PF13378 Enolase C-terminal domain-like AMD18_RS19890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD18_RS19900 PF13520 Amino acid permease AMD18_RS19915 PF05360 yiaA/B two helix domain AMD18_RS19920 PF07995 Glucose / Sorbosone dehydrogenase AMD18_RS19925 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD18_RS19925 PF14310 Fibronectin type III-like domain AMD18_RS19925 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD18_RS19930 PF02152 Dihydroneopterin aldolase AMD18_RS19935 PF00814 Glycoprotease family AMD18_RS19940 PF01165 Ribosomal protein S21 AMD18_RS19945 PF09424 Yqey-like protein AMD18_RS19950 PF03631 Virulence factor BrkB AMD18_RS19955 PF08275 DNA primase catalytic core, N-terminal domain AMD18_RS19955 PF08278 DNA primase DnaG DnaB-binding AMD18_RS19955 PF01807 CHC2 zinc finger AMD18_RS19955 PF10410 DnaB-helicase binding domain of primase AMD18_RS19960 PF13593 SBF-like CPA transporter family (DUF4137) AMD18_RS19970 PF01040 UbiA prenyltransferase family AMD18_RS19995 PF00510 Cytochrome c oxidase subunit III AMD18_RS20000 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMD18_RS20005 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD18_RS20010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD18_RS20010 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMD18_RS20020 PF00171 Aldehyde dehydrogenase family AMD18_RS20020 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD18_RS20020 PF01619 Proline dehydrogenase AMD18_RS20020 PF14850 DNA-binding domain of Proline dehydrogenase AMD18_RS20055 PF00579 tRNA synthetases class I (W and Y) AMD18_RS20060 PF04225 Opacity-associated protein A LysM-like domain AMD18_RS20060 PF01551 Peptidase family M23 AMD18_RS20065 PF03702 Anhydro-N-acetylmuramic acid kinase AMD18_RS20075 PF07690 Major Facilitator Superfamily AMD18_RS20080 PF03372 Endonuclease/Exonuclease/phosphatase family AMD18_RS20085 PF00156 Phosphoribosyl transferase domain AMD18_RS20095 PF13614 AAA domain AMD18_RS20100 PF02195 ParB-like nuclease domain AMD18_RS20100 PF17762 HTH domain found in ParB protein AMD18_RS20110 PF01370 NAD dependent epimerase/dehydratase family AMD18_RS20115 PF00535 Glycosyl transferase family 2 AMD18_RS20130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD18_RS20130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD18_RS20130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD18_RS20130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD18_RS20135 PF00692 dUTPase AMD18_RS20140 PF02441 Flavoprotein AMD18_RS20140 PF04127 DNA / pantothenate metabolism flavoprotein AMD18_RS20145 PF04002 RadC-like JAB domain AMD18_RS20150 PF03485 Arginyl tRNA synthetase N terminal domain AMD18_RS20150 PF00750 tRNA synthetases class I (R) AMD18_RS20150 PF05746 DALR anticodon binding domain AMD18_RS20165 PF00106 short chain dehydrogenase AMD18_RS20170 PF01757 Acyltransferase family AMD18_RS20175 PF03033 Glycosyltransferase family 28 N-terminal domain AMD18_RS20180 PF00975 Thioesterase domain AMD18_RS20180 PF13193 AMP-binding enzyme C-terminal domain AMD18_RS20180 PF00550 Phosphopantetheine attachment site AMD18_RS20180 PF00668 Condensation domain AMD18_RS20180 PF00501 AMP-binding enzyme AMD18_RS20190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD18_RS20190 PF17810 Arginine decarboxylase helical bundle domain AMD18_RS20190 PF17944 Arginine decarboxylase C-terminal helical extension AMD18_RS20195 PF17284 Spermidine synthase tetramerisation domain AMD18_RS20225 PF00543 Nitrogen regulatory protein P-II AMD18_RS20230 PF04380 Membrane fusogenic activity AMD18_RS20235 PF01078 Magnesium chelatase, subunit ChlI AMD18_RS20235 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMD18_RS20250 PF12792 CSS motif domain associated with EAL AMD18_RS20250 PF00563 EAL domain AMD18_RS20255 PF00487 Fatty acid desaturase AMD18_RS20260 PF00970 Oxidoreductase FAD-binding domain AMD18_RS20260 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD18_RS20260 PF00175 Oxidoreductase NAD-binding domain AMD18_RS20265 PF00440 Bacterial regulatory proteins, tetR family AMD18_RS20285 PF01139 tRNA-splicing ligase RtcB AMD18_RS20325 PF08338 Domain of unknown function (DUF1731) AMD18_RS20325 PF01370 NAD dependent epimerase/dehydratase family AMD18_RS20330 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS20330 PF00072 Response regulator receiver domain AMD18_RS20335 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS20335 PF08521 Two-component sensor kinase N-terminal AMD18_RS20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS20355 PF00595 PDZ domain AMD18_RS20375 PF01594 AI-2E family transporter AMD18_RS20380 PF13419 Haloacid dehalogenase-like hydrolase AMD18_RS20385 PF00883 Cytosol aminopeptidase family, catalytic domain AMD18_RS20385 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD18_RS20395 PF08281 Sigma-70, region 4 AMD18_RS20395 PF04542 Sigma-70 region 2 AMD18_RS20400 PF00199 Catalase AMD18_RS20415 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS20415 PF00072 Response regulator receiver domain AMD18_RS20420 PF07730 Histidine kinase AMD18_RS20425 PF13533 Biotin-lipoyl like AMD18_RS20430 PF00005 ABC transporter AMD18_RS20455 PF00892 EamA-like transporter family AMD18_RS20470 PF00753 Metallo-beta-lactamase superfamily AMD18_RS20475 PF00579 tRNA synthetases class I (W and Y) AMD18_RS20480 PF05532 CsbD-like AMD18_RS20495 PF00491 Arginase family AMD18_RS20520 PF02223 Thymidylate kinase AMD18_RS20535 PF03309 Type III pantothenate kinase AMD18_RS20540 PF03099 Biotin/lipoate A/B protein ligase family AMD18_RS20540 PF02237 Biotin protein ligase C terminal domain AMD18_RS20540 PF08279 HTH domain AMD18_RS20550 PF06167 Glucose-regulated metallo-peptidase M90 AMD18_RS20565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS20570 PF00072 Response regulator receiver domain AMD18_RS20570 PF00486 Transcriptional regulatory protein, C terminal AMD18_RS20580 PF01207 Dihydrouridine synthase (Dus) AMD18_RS20600 PF13307 Helicase C-terminal domain AMD18_RS20600 PF06733 DEAD_2 AMD18_RS20615 PF01488 Shikimate / quinate 5-dehydrogenase AMD18_RS20615 PF08501 Shikimate dehydrogenase substrate binding domain AMD18_RS20615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMD18_RS20625 PF00175 Oxidoreductase NAD-binding domain AMD18_RS20625 PF00667 FAD binding domain AMD18_RS20625 PF00258 Flavodoxin AMD18_RS20635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS20635 PF03466 LysR substrate binding domain AMD18_RS20645 PF00490 Delta-aminolevulinic acid dehydratase AMD18_RS20670 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMD18_RS20670 PF00326 Prolyl oligopeptidase family AMD18_RS20675 PF00043 Glutathione S-transferase, C-terminal domain AMD18_RS20675 PF02798 Glutathione S-transferase, N-terminal domain AMD18_RS20700 PF04820 Tryptophan halogenase AMD18_RS20715 PF00005 ABC transporter AMD18_RS20725 PF01381 Helix-turn-helix AMD18_RS20735 PF01229 Glycosyl hydrolases family 39 AMD18_RS20740 PF02583 Metal-sensitive transcriptional repressor AMD18_RS20745 PF16916 Dimerisation domain of Zinc Transporter AMD18_RS20745 PF01545 Cation efflux family AMD18_RS20755 PF07715 TonB-dependent Receptor Plug Domain AMD18_RS20755 PF00593 TonB dependent receptor AMD18_RS20765 PF01965 DJ-1/PfpI family AMD18_RS20765 PF12833 Helix-turn-helix domain AMD18_RS20770 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD18_RS20770 PF00970 Oxidoreductase FAD-binding domain AMD18_RS20770 PF00175 Oxidoreductase NAD-binding domain AMD18_RS20775 PF00005 ABC transporter AMD18_RS20780 PF01061 ABC-2 type transporter AMD18_RS20790 PF02558 Ketopantoate reductase PanE/ApbA AMD18_RS20790 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD18_RS20820 PF00268 Ribonucleotide reductase, small chain AMD18_RS20825 PF02867 Ribonucleotide reductase, barrel domain AMD18_RS20825 PF00317 Ribonucleotide reductase, all-alpha domain AMD18_RS20825 PF03477 ATP cone domain AMD18_RS20835 PF13380 CoA binding domain AMD18_RS20835 PF13607 Succinyl-CoA ligase like flavodoxin domain AMD18_RS20835 PF00583 Acetyltransferase (GNAT) family AMD18_RS20840 PF03448 MgtE intracellular N domain AMD18_RS20840 PF01769 Divalent cation transporter AMD18_RS20840 PF00571 CBS domain AMD18_RS20845 PF00194 Eukaryotic-type carbonic anhydrase AMD18_RS20850 PF02254 TrkA-N domain AMD18_RS20850 PF00999 Sodium/hydrogen exchanger family AMD18_RS20855 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMD18_RS20855 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMD18_RS20860 PF00723 Glycosyl hydrolases family 15 AMD18_RS20875 PF05166 YcgL domain AMD18_RS20880 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD18_RS20880 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD18_RS20890 PF00535 Glycosyl transferase family 2 AMD18_RS20945 PF07977 FabA-like domain AMD18_RS20950 PF01553 Acyltransferase AMD18_RS20960 PF00550 Phosphopantetheine attachment site AMD18_RS20965 PF04820 Tryptophan halogenase AMD18_RS20985 PF00326 Prolyl oligopeptidase family AMD18_RS20985 PF07676 WD40-like Beta Propeller Repeat AMD18_RS21000 PF01218 Coproporphyrinogen III oxidase AMD18_RS21005 PF00476 DNA polymerase family A AMD18_RS21005 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD18_RS21005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD18_RS21005 PF01612 3'-5' exonuclease AMD18_RS21015 PF06812 ImpA, N-terminal, type VI secretion system AMD18_RS21035 PF00069 Protein kinase domain AMD18_RS21035 PF03793 PASTA domain AMD18_RS21050 PF14331 ImcF-related N-terminal domain AMD18_RS21050 PF06744 Type VI secretion protein IcmF C-terminal AMD18_RS21050 PF06761 Intracellular multiplication and human macrophage-killing AMD18_RS21060 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AMD18_RS21075 PF04717 Type VI secretion system, phage-baseplate injector AMD18_RS21090 PF00069 Protein kinase domain AMD18_RS21090 PF03793 PASTA domain AMD18_RS21100 PF04542 Sigma-70 region 2 AMD18_RS21100 PF08281 Sigma-70, region 4 AMD18_RS21115 PF00328 Histidine phosphatase superfamily (branch 2) AMD18_RS21145 PF10431 C-terminal, D2-small domain, of ClpB protein AMD18_RS21145 PF00004 ATPase family associated with various cellular activities (AAA) AMD18_RS21145 PF07724 AAA domain (Cdc48 subfamily) AMD18_RS21145 PF17871 AAA lid domain AMD18_RS21155 PF05947 Type VI secretion system, TssF AMD18_RS21160 PF04965 Gene 25-like lysozyme AMD18_RS21165 PF07024 ImpE protein AMD18_RS21170 PF05638 Type VI secretion system effector, Hcp AMD18_RS21175 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMD18_RS21180 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AMD18_RS21195 PF14602 Hexapeptide repeat of succinyl-transferase AMD18_RS21195 PF12464 Maltose acetyltransferase AMD18_RS21200 PF00580 UvrD/REP helicase N-terminal domain AMD18_RS21200 PF13361 UvrD-like helicase C-terminal domain AMD18_RS21215 PF13396 Phospholipase_D-nuclease N-terminal AMD18_RS21215 PF13091 PLD-like domain AMD18_RS21220 PF03466 LysR substrate binding domain AMD18_RS21220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS21225 PF03737 Aldolase/RraA AMD18_RS21230 PF04303 PrpF protein AMD18_RS21235 PF04909 Amidohydrolase AMD18_RS21240 PF00471 Ribosomal protein L33 AMD18_RS21245 PF00830 Ribosomal L28 family AMD18_RS21250 PF00873 AcrB/AcrD/AcrF family AMD18_RS21255 PF13533 Biotin-lipoyl like AMD18_RS21275 PF02527 rRNA small subunit methyltransferase G AMD18_RS21280 PF16655 PhoD-like phosphatase, N-terminal domain AMD18_RS21280 PF09423 PhoD-like phosphatase AMD18_RS21285 PF16655 PhoD-like phosphatase, N-terminal domain AMD18_RS21285 PF09423 PhoD-like phosphatase AMD18_RS21290 PF01648 4'-phosphopantetheinyl transferase superfamily AMD18_RS21300 PF04226 Transglycosylase associated protein AMD18_RS21310 PF03372 Endonuclease/Exonuclease/phosphatase family AMD18_RS21315 PF00480 ROK family AMD18_RS21325 PF09312 SurA N-terminal domain AMD18_RS21335 PF00474 Sodium:solute symporter family AMD18_RS21340 PF04341 Protein of unknown function, DUF485 AMD18_RS21350 PF13193 AMP-binding enzyme C-terminal domain AMD18_RS21350 PF16177 Acetyl-coenzyme A synthetase N-terminus AMD18_RS21350 PF00501 AMP-binding enzyme AMD18_RS21355 PF00072 Response regulator receiver domain AMD18_RS21355 PF00196 Bacterial regulatory proteins, luxR family AMD18_RS21380 PF04616 Glycosyl hydrolases family 43 AMD18_RS21380 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD18_RS21390 PF00248 Aldo/keto reductase family AMD18_RS21405 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD18_RS21410 PF13378 Enolase C-terminal domain-like AMD18_RS21410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD18_RS21420 PF05336 L-rhamnose mutarotase AMD18_RS21425 PF07690 Major Facilitator Superfamily AMD18_RS21430 PF09339 IclR helix-turn-helix domain AMD18_RS21430 PF01614 Bacterial transcriptional regulator AMD18_RS21435 PF02659 Putative manganese efflux pump AMD18_RS21440 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS21440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS21455 PF06165 Glycosyltransferase family 36 AMD18_RS21455 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AMD18_RS21470 PF13570 PQQ-like domain AMD18_RS21470 PF01011 PQQ enzyme repeat AMD18_RS21470 PF13360 PQQ-like domain AMD18_RS21490 PF04357 TamB, inner membrane protein subunit of TAM complex AMD18_RS21495 PF01103 Surface antigen AMD18_RS21495 PF17243 POTRA domain TamA domain 1 AMD18_RS21525 PF00664 ABC transporter transmembrane region AMD18_RS21525 PF03412 Peptidase C39 family AMD18_RS21525 PF00005 ABC transporter AMD18_RS21530 PF05746 DALR anticodon binding domain AMD18_RS21530 PF02092 Glycyl-tRNA synthetase beta subunit AMD18_RS21535 PF02091 Glycyl-tRNA synthetase alpha subunit AMD18_RS21540 PF00437 Type II/IV secretion system protein AMD18_RS21540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD18_RS21550 PF00117 Glutamine amidotransferase class-I AMD18_RS21550 PF00958 GMP synthase C terminal domain AMD18_RS21560 PF00902 Sec-independent protein translocase protein (TatC) AMD18_RS21565 PF02416 mttA/Hcf106 family AMD18_RS21570 PF02416 mttA/Hcf106 family AMD18_RS21580 PF00762 Ferrochelatase AMD18_RS21585 PF12697 Alpha/beta hydrolase family AMD18_RS21600 PF04381 Putative exonuclease, RdgC AMD18_RS21605 PF01171 PP-loop family AMD18_RS21615 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS21620 PF07488 Glycosyl hydrolase family 67 middle domain AMD18_RS21620 PF03648 Glycosyl hydrolase family 67 N-terminus AMD18_RS21620 PF07477 Glycosyl hydrolase family 67 C-terminus AMD18_RS21630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD18_RS21630 PF13378 Enolase C-terminal domain-like AMD18_RS21635 PF04616 Glycosyl hydrolases family 43 AMD18_RS21635 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMD18_RS21640 PF14310 Fibronectin type III-like domain AMD18_RS21640 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD18_RS21640 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMD18_RS21640 PF07691 PA14 domain AMD18_RS21645 PF08125 Mannitol dehydrogenase C-terminal domain AMD18_RS21645 PF01232 Mannitol dehydrogenase Rossmann domain AMD18_RS21670 PF00171 Aldehyde dehydrogenase family AMD18_RS21695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD18_RS21695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD18_RS21720 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD18_RS21725 PF00331 Glycosyl hydrolase family 10 AMD18_RS21730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD18_RS21730 PF00703 Glycosyl hydrolases family 2 AMD18_RS21730 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMD18_RS21730 PF16355 Domain of unknown function (DUF4982) AMD18_RS21730 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD18_RS21735 PF02614 Glucuronate isomerase AMD18_RS21740 PF00331 Glycosyl hydrolase family 10 AMD18_RS21740 PF00553 Cellulose binding domain AMD18_RS21740 PF03422 Carbohydrate binding module (family 6) AMD18_RS21755 PF03422 Carbohydrate binding module (family 6) AMD18_RS21755 PF00553 Cellulose binding domain AMD18_RS21755 PF00331 Glycosyl hydrolase family 10 AMD18_RS21775 PF04616 Glycosyl hydrolases family 43 AMD18_RS21805 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD18_RS21805 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD18_RS21805 PF14765 Polyketide synthase dehydratase AMD18_RS21805 PF00550 Phosphopantetheine attachment site AMD18_RS21805 PF00698 Acyl transferase domain AMD18_RS21805 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS21805 PF00107 Zinc-binding dehydrogenase AMD18_RS21805 PF16197 Ketoacyl-synthetase C-terminal extension AMD18_RS21805 PF08659 KR domain AMD18_RS21810 PF01553 Acyltransferase AMD18_RS21820 PF00356 Bacterial regulatory proteins, lacI family AMD18_RS21840 PF04820 Tryptophan halogenase AMD18_RS21845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD18_RS21850 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AMD18_RS21855 PF04337 Protein of unknown function, DUF480 AMD18_RS21870 PF00580 UvrD/REP helicase N-terminal domain AMD18_RS21870 PF13361 UvrD-like helicase C-terminal domain AMD18_RS21875 PF00265 Thymidine kinase AMD18_RS21880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD18_RS21880 PF01590 GAF domain AMD18_RS21880 PF00360 Phytochrome region AMD18_RS21880 PF00512 His Kinase A (phospho-acceptor) domain AMD18_RS21880 PF08446 PAS fold AMD18_RS21885 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMD18_RS21895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD18_RS21895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD18_RS21895 PF06827 Zinc finger found in FPG and IleRS AMD18_RS21930 PF03594 Benzoate membrane transport protein AMD18_RS21935 PF01590 GAF domain AMD18_RS21935 PF13426 PAS domain AMD18_RS21935 PF00360 Phytochrome region AMD18_RS21935 PF08446 PAS fold AMD18_RS21940 PF01126 Heme oxygenase AMD18_RS21945 PF07690 Major Facilitator Superfamily AMD18_RS21950 PF01263 Aldose 1-epimerase AMD18_RS21960 PF02810 SEC-C motif AMD18_RS21965 PF01925 Sulfite exporter TauE/SafE AMD18_RS21985 PF01227 GTP cyclohydrolase I AMD18_RS21995 PF07869 Protein of unknown function (DUF1656) AMD18_RS22000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD18_RS22000 PF00529 HlyD membrane-fusion protein of T1SS AMD18_RS22005 PF02321 Outer membrane efflux protein AMD18_RS22010 PF04632 Fusaric acid resistance protein family AMD18_RS22015 PF00083 Sugar (and other) transporter AMD18_RS22020 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMD18_RS22025 PF13091 PLD-like domain AMD18_RS22025 PF13396 Phospholipase_D-nuclease N-terminal AMD18_RS22050 PF01850 PIN domain AMD18_RS22075 PF00849 RNA pseudouridylate synthase AMD18_RS22110 PF02785 Biotin carboxylase C-terminal domain AMD18_RS22110 PF00289 Biotin carboxylase, N-terminal domain AMD18_RS22110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD18_RS22115 PF01425 Amidase AMD18_RS22145 PF13538 UvrD-like helicase C-terminal domain AMD18_RS22150 PF00580 UvrD/REP helicase N-terminal domain AMD18_RS22150 PF12705 PD-(D/E)XK nuclease superfamily AMD18_RS22150 PF13361 UvrD-like helicase C-terminal domain AMD18_RS22155 PF17946 RecC C-terminal domain AMD18_RS22170 PF00005 ABC transporter AMD18_RS22175 PF02405 Permease MlaE AMD18_RS22180 PF02470 MlaD protein AMD18_RS22185 PF05494 MlaC protein AMD18_RS22195 PF04333 MlaA lipoprotein AMD18_RS22205 PF00255 Glutathione peroxidase AMD18_RS22215 PF02646 RmuC family AMD18_RS22220 PF08240 Alcohol dehydrogenase GroES-like domain AMD18_RS22220 PF00107 Zinc-binding dehydrogenase AMD18_RS22225 PF03466 LysR substrate binding domain AMD18_RS22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD18_RS22235 PF13417 Glutathione S-transferase, N-terminal domain AMD18_RS22235 PF00043 Glutathione S-transferase, C-terminal domain AMD18_RS22245 PF13520 Amino acid permease AMD18_RS22250 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMD18_RS22250 PF07971 Glycosyl hydrolase family 92 AMD18_RS22255 PF10947 Protein of unknown function (DUF2628) AMD18_RS22260 PF00990 Diguanylate cyclase, GGDEF domain AMD18_RS22265 PF05651 Putative sugar diacid recognition AMD18_RS22265 PF13556 PucR C-terminal helix-turn-helix domain AMD18_RS22265 PF17853 GGDEF-like domain AMD18_RS22270 PF02595 Glycerate kinase family AMD18_RS22275 PF07690 Major Facilitator Superfamily AMD18_RS22290 PF10672 S-adenosylmethionine-dependent methyltransferase AMD18_RS22290 PF17785 PUA-like domain AMD18_RS22295 PF03741 Integral membrane protein TerC family AMD18_RS22300 PF01694 Rhomboid family AMD18_RS22305 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD18_RS22315 PF01569 PAP2 superfamily AMD18_RS22320 PF01926 50S ribosome-binding GTPase AMD18_RS22320 PF12631 MnmE helical domain AMD18_RS22320 PF10396 GTP-binding protein TrmE N-terminus AMD18_RS22325 PF01522 Polysaccharide deacetylase AMD18_RS22335 PF02096 60Kd inner membrane protein AMD18_RS22335 PF14849 YidC periplasmic domain AMD18_RS22340 PF00825 Ribonuclease P AMD18_RS22345 PF00468 Ribosomal protein L34